Psyllid ID: psy16020

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-
Protein Sequence
MEYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEEEEccEEEEEEcccEEEEEEccccccccccccEEEEEcccccccEEEEEEccEEEEEEccEEEEEccccccEEEEEEEcccccccEEEEEEEccEEEEEEccccEEEEEEcccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEEEEEcccEEEEEEEccEEEEEEccccccccccccEEEEEcccccccEEEEEEccEEEEEEccEEEEEccccEEEEEEEEcccccccEEEEEEEEccEEEEEEEcccEEEEEcHHHHHHHHHccccccHHccc
Coil and Loop (DISEMBL)
meyphptpyplnkildtalppvhvQGRVVCALadgsvaifrrgpdgqwdlskyhtvtlglphhsVRSLAAVYNKVWcgyknkihvvdpkslvvlksfdahprresqvRQMTWAGDGVWVSIRLDSTLRMYNAhtyqhlqdvdiepyvskml
Flexible Loop (DISEMBL)
MEYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNkihvvdpkSLVVLKSFdahprresqvrqmtwagdgVWVSIRLDSTLRMYNAHTyqhlqdvdiEPYVSKML
Low Complexity Region (SEG)
MEYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML
Disordered region (IsUnstruct)
*********PLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY*****
Disordered Region (DISOPRED)
************KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVL**********SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML
Disordered Region (DISEMBL)
MEYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML
Disordered Region (DISPRO)
**YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEYPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	151	2.2.26 [Sep-21-2011]
Q58A65	1321	C-Jun-amino-terminal kina	yes	N/A	0.920	0.105	0.712	2e-59
Q9UPT6	1336	C-Jun-amino-terminal kina	yes	N/A	0.920	0.104	0.726	3e-59
O60271	1321	C-Jun-amino-terminal kina	no	N/A	0.920	0.105	0.712	3e-59
Q9ESN9	1337	C-Jun-amino-terminal kina	no	N/A	0.920	0.103	0.719	1e-58
Q9GQF1	1227	JNK-interacting protein 3	yes	N/A	0.933	0.114	0.608	1e-47
Q29EP6	1235	JNK-interacting protein 3	yes	N/A	0.933	0.114	0.608	2e-47
P34609	1157	JNK-interacting protein O	yes	N/A	0.920	0.120	0.553	7e-42
O15013	1369	Rho guanine nucleotide ex	no	N/A	0.788	0.086	0.317	7e-14
Q8C033	1345	Rho guanine nucleotide ex	no	N/A	0.781	0.087	0.327	1e-13
Q80U35	2057	Rho guanine nucleotide ex	no	N/A	0.860	0.063	0.261	7e-13

>sp|Q58A65|JIP4_MOUSE C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus GN=Spag9 PE=1 SV=2

 Score =  227 bits (578), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/139 (71%), Positives = 119/139 (85%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +  V+
Sbjct: 998  KLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVH 1057

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            +KVWCGY+NKI+VV PK++ + KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHA 1117

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HTYQHLQDVDIEPYVSKML
Sbjct: 1118 HTYQHLQDVDIEPYVSKML 1136

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module.
Mus musculus (taxid: 10090)

>sp|Q9UPT6|JIP3_HUMAN C-Jun-amino-terminal kinase-interacting protein 3 OS=Homo sapiens GN=MAPK8IP3 PE=1 SV=3

 Score =  227 bits (578), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 997  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1056

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1057 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1116

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1117 HTHQHLQDVDIEPYVSKML 1135

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins.

Homo sapiens (taxid: 9606)

>sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens GN=SPAG9 PE=1 SV=4

 Score =  226 bits (577), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 99/139 (71%), Positives = 119/139 (85%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +  V+
Sbjct: 998  KLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVH 1057

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            +KVWCGY+NKI+VV PK++ + KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHA 1117

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HTYQHLQDVDIEPYVSKML
Sbjct: 1118 HTYQHLQDVDIEPYVSKML 1136

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. Isoform 5 may play a role in spermatozoa-egg-interaction.

Homo sapiens (taxid: 9606)

>sp|Q9ESN9|JIP3_MOUSE C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus GN=Mapk8ip3 PE=1 SV=1

 Score =  224 bits (572), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 100/139 (71%), Positives = 120/139 (86%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V 
Sbjct: 998  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVN 1057

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1117

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1118 HTHQHLQDVDIEPYVSKML 1136

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins.

Mus musculus (taxid: 10090)

>sp|Q9GQF1|JIP3_DROME JNK-interacting protein 3 OS=Drosophila melanogaster GN=syd PE=1 SV=1

 Score =  187 bits (476), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 87/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)

Query: 11   LNKIL--DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSL 68
            L+++L  D  L  VHV+ RVV ALA+  +A+FRR  DGQWDL+ YH VTLG  +HS+R L
Sbjct: 940  LHRVLLPDAVLAIVHVEARVVVALANAQLAVFRRQTDGQWDLNSYHLVTLGDRNHSIRCL 999

Query: 69   AAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLR 128
                 ++W  ++NKI +VDP SL ++ S DAHPR+ESQVRQM   G GVWVSIRLDSTLR
Sbjct: 1000 CVAGERIWAAHRNKIFIVDPVSLNIVHSLDAHPRKESQVRQMAATGAGVWVSIRLDSTLR 1059

Query: 129  MYNAHTYQHLQDVDIEPYVSKML 151
            +YN HT++H QDVDIEPYVSKML
Sbjct: 1060 LYNTHTFEHKQDVDIEPYVSKML 1082

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK-signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins. Syd is required for efficient kinesin-I mediated axonal transport.

Drosophila melanogaster (taxid: 7227)

>sp|Q29EP6|JIP3_DROPS JNK-interacting protein 3 OS=Drosophila pseudoobscura pseudoobscura GN=syd PE=3 SV=2

 Score =  187 bits (475), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)

Query: 11   LNKIL--DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSL 68
            L+++L  D  L  VHV+ RVV ALA+  +A+FRR  DGQWDL+ YH VTLG  +HS+R L
Sbjct: 948  LHRVLLPDAVLAIVHVEARVVVALANAQLAVFRRQTDGQWDLNSYHLVTLGDRNHSIRCL 1007

Query: 69   AAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLR 128
                 ++W  ++NKI +VDP SL ++ S DAHPR+ESQVRQM   G GVWVSIRLDSTLR
Sbjct: 1008 CVAGERIWAAHRNKIFIVDPISLNIVHSLDAHPRKESQVRQMAATGAGVWVSIRLDSTLR 1067

Query: 129  MYNAHTYQHLQDVDIEPYVSKML 151
            +YN HT++H QDVDIEPYVSKML
Sbjct: 1068 LYNTHTFEHKQDVDIEPYVSKML 1090

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK-signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins. Syd is required for efficient kinesin-I mediated axonal transport.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|P34609|JIP_CAEEL JNK-interacting protein OS=Caenorhabditis elegans GN=unc-16 PE=1 SV=3

 Score =  169 bits (427), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 77/139 (55%), Positives = 100/139 (71%)

Query: 13  KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
           K+ D  L  VH + R+  ALA+G++AIF R   G+W    YH++ +G    SVRSL  V 
Sbjct: 846 KMPDAVLSIVHYKSRIFAALANGTIAIFHRNKHGEWSDEGYHSLRVGSATSSVRSLCLVS 905

Query: 73  NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             +W  YKN + V+D +SL ++K F AHPR++SQVR M W G GVW+SIRLDSTLR+Y+A
Sbjct: 906 TNIWATYKNCVVVLDAESLQIVKVFAAHPRKDSQVRNMQWVGAGVWLSIRLDSTLRLYHA 965

Query: 133 HTYQHLQDVDIEPYVSKML 151
           HTY+HLQDVDIEPYV+KML
Sbjct: 966 HTYEHLQDVDIEPYVTKML 984

The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of synaptic vesicle transport, through interations with the JNK-signaling components and motor proteins. Binds specific components of the JNK signaling pathway namely jnk-1, jkk-1 and sek-1. Associates with components of the motor protein, kinesin-1. Pre-assembled unc-16 scaffolding complexes are then transported as a cargo of kinesin, to the required subcellular location.

Caenorhabditis elegans (taxid: 6239)

>sp|O15013|ARHGA_HUMAN Rho guanine nucleotide exchange factor 10 OS=Homo sapiens GN=ARHGEF10 PE=1 SV=4

 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 30   CALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYKNKIHVVDP 88
              L +G+VA + R PDG WD      + LG LP   VRSL  + + +W     ++ ++  
Sbjct: 1037 AGLVNGAVASYARAPDGSWDSEPQKVIKLGVLP---VRSLLMMEDTLWAASGGQVFIISV 1093

Query: 89   KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 148
            ++  V    +AH      +  M  +G G+W++    STLR+++  T +HLQD++I   V 
Sbjct: 1094 ETHAVEGQLEAHQEEGMVISHMAVSGVGIWIAFTSGSTLRLFHTETLKHLQDINIATPVH 1153

Query: 149  KML 151
             ML
Sbjct: 1154 NML 1156

May play a role in developmental myelination of peripheral nerves.

Homo sapiens (taxid: 9606)

>sp|Q8C033|ARHGA_MOUSE Rho guanine nucleotide exchange factor 10 OS=Mus musculus GN=Arhgef10 PE=1 SV=2

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 31   ALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYKNKIHVVDPK 89
             L +GSVA + + PDG W+      + LG LP   VRSL  V   +W     ++ +   +
Sbjct: 1015 GLVNGSVASYTKAPDGSWNSEPQQVIKLGVLP---VRSLLLVEGALWAASGGQVFMASVE 1071

Query: 90   SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 149
            +  +    +AH      +  M  AG G+W++    STLR+++  T +HLQDV+I+  V  
Sbjct: 1072 THTIENQLEAHQDEGMVISHMAVAGVGIWIAFTSGSTLRLFHTETLKHLQDVNIDAPVHS 1131

Query: 150  ML 151
            ML
Sbjct: 1132 ML 1133

May play a role in developmental myelination of peripheral nerves.

Mus musculus (taxid: 10090)

>sp|Q80U35|ARHGH_MOUSE Rho guanine nucleotide exchange factor 17 OS=Mus musculus GN=Arhgef17 PE=1 SV=2

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 72/130 (55%)

Query: 22   VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN 81
            +++  +V  +LA+G + +++R     WD   + ++TLG     +  + +V  ++WCG +N
Sbjct: 1772 LYLNNKVFVSLANGELVVYQREAGRFWDPQNFKSMTLGSQGSPITKMVSVGGRLWCGCQN 1831

Query: 82   KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 141
            ++ V+ P +L +  +F         V  M  +  GVWV+++  + + +Y+  T++ L +V
Sbjct: 1832 RVLVLSPDTLQLEHTFYVGQDSSRSVACMVDSSLGVWVTLKGSAHVCLYHPDTFEQLAEV 1891

Query: 142  DIEPYVSKML 151
            D+ P V +ML
Sbjct: 1892 DVTPPVHRML 1901

Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPases.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	151
334333782	1304	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.106	0.726	1e-59
334333784	1298	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.107	0.726	1e-59
395515729	1302	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.106	0.726	2e-59
395515721	1296	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.107	0.726	2e-59
334333780	1312	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.105	0.726	2e-59
126335454	1335	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.104	0.726	2e-59
126335456	1328	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.104	0.726	2e-59
395515727	1310	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.106	0.726	2e-59
395515719	1333	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.104	0.726	2e-59
334333778	1320	PREDICTED: c-Jun-amino-terminal kinase-i	0.920	0.105	0.726	2e-59

>gi|334333782|ref|XP_003341765.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 [Monodelphis domestica]

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 967  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1026

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1027 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1086

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1087 HTHQHLQDVDIEPYVSKML 1105

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334333784|ref|XP_003341766.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 [Monodelphis domestica]

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 961  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1020

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1021 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1080

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1081 HTHQHLQDVDIEPYVSKML 1099

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395515729|ref|XP_003762052.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 isoform 6 [Sarcophilus harrisii]

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 965  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1024

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1025 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1084

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1085 HTHQHLQDVDIEPYVSKML 1103

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395515721|ref|XP_003762048.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 isoform 2 [Sarcophilus harrisii]

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 959  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1018

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1019 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1078

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1079 HTHQHLQDVDIEPYVSKML 1097

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334333780|ref|XP_003341764.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 [Monodelphis domestica]

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 975  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1034

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1035 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1094

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1095 HTHQHLQDVDIEPYVSKML 1113

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|126335454|ref|XP_001362634.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 isoform 1 [Monodelphis domestica]

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 998  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1057

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1117

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1118 HTHQHLQDVDIEPYVSKML 1136

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|126335456|ref|XP_001362721.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 isoform 2 [Monodelphis domestica]

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 991  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1050

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1051 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1110

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1111 HTHQHLQDVDIEPYVSKML 1129

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395515727|ref|XP_003762051.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 isoform 5 [Sarcophilus harrisii]

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 973  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1032

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1033 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1092

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1093 HTHQHLQDVDIEPYVSKML 1111

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395515719|ref|XP_003762047.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 isoform 1 [Sarcophilus harrisii]

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 996  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1055

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1056 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1115

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1116 HTHQHLQDVDIEPYVSKML 1134

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334333778|ref|XP_003341763.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 3 [Monodelphis domestica]

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query: 13   KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
            K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 983  KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1042

Query: 73   NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
            ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1043 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1102

Query: 133  HTYQHLQDVDIEPYVSKML 151
            HT+QHLQDVDIEPYVSKML
Sbjct: 1103 HTHQHLQDVDIEPYVSKML 1121

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	151
UNIPROTKB|Q9UPT6	1336	MAPK8IP3 "C-Jun-amino-terminal	0.920	0.104	0.726	1.4e-54
UNIPROTKB|E1BN82	1328	MAPK8IP3 "Uncharacterized prot	0.920	0.104	0.719	4.9e-54
UNIPROTKB|F1RG15	1336	MAPK8IP3 "Uncharacterized prot	0.920	0.104	0.719	4.9e-54
MGI|MGI:1353598	1337	Mapk8ip3 "mitogen-activated pr	0.920	0.103	0.719	1.3e-53
UNIPROTKB|D4AD98	1337	Mapk8ip3 "Mitogen-activated pr	0.920	0.103	0.719	1.7e-53
UNIPROTKB|D4A8Q8	1345	Mapk8ip3 "Protein Mapk8ip3" [R	0.920	0.103	0.719	1.7e-53
UNIPROTKB|F1PY25	1330	MAPK8IP3 "Uncharacterized prot	0.920	0.104	0.712	5.7e-53
RGD|1311289	404	Spag9 "sperm associated antige	0.920	0.344	0.702	1e-52
UNIPROTKB|F1MZ69	1177	SPAG9 "Uncharacterized protein	0.920	0.118	0.712	1.1e-52
UNIPROTKB|O60271	1321	SPAG9 "C-Jun-amino-terminal ki	0.920	0.105	0.712	1.5e-52

UNIPROTKB|Q9UPT6 MAPK8IP3 "C-Jun-amino-terminal kinase-interacting protein 3" [Homo sapiens (taxid:9606)]

 Score = 575 (207.5 bits), Expect = 1.4e-54, P = 1.4e-54
 Identities = 101/139 (72%), Positives = 121/139 (87%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct:   997 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1056

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1057 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1116

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1117 HTHQHLQDVDIEPYVSKML 1135

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0005790 "smooth endoplasmic reticulum" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030673 "axolemma" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0060425 "lung morphogenesis" evidence=IEA

GO:0000139 "Golgi membrane" evidence=ISS

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0046328 "regulation of JNK cascade" evidence=ISS

GO:0019901 "protein kinase binding" evidence=ISS

GO:0019894 "kinesin binding" evidence=ISS

GO:0005078 "MAP-kinase scaffold activity" evidence=ISS

UNIPROTKB|E1BN82 MAPK8IP3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 570 (205.7 bits), Expect = 4.9e-54, P = 4.9e-54
 Identities = 100/139 (71%), Positives = 121/139 (87%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V+
Sbjct:   989 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVH 1048

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1049 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1108

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1109 HTHQHLQDVDIEPYVSKML 1127

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0005790 "smooth endoplasmic reticulum" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0060425 "lung morphogenesis" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030673 "axolemma" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

UNIPROTKB|F1RG15 MAPK8IP3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 570 (205.7 bits), Expect = 4.9e-54, P = 4.9e-54
 Identities = 100/139 (71%), Positives = 121/139 (87%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V+
Sbjct:   997 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVH 1056

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1057 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1116

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1117 HTHQHLQDVDIEPYVSKML 1135

GO:0060425 "lung morphogenesis" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030673 "axolemma" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0005790 "smooth endoplasmic reticulum" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

MGI|MGI:1353598 Mapk8ip3 "mitogen-activated protein kinase 8 interacting protein 3" [Mus musculus (taxid:10090)]

 Score = 566 (204.3 bits), Expect = 1.3e-53, P = 1.3e-53
 Identities = 100/139 (71%), Positives = 120/139 (86%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V 
Sbjct:   998 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVN 1057

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1058 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1117

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1118 HTHQHLQDVDIEPYVSKML 1136

GO:0000139 "Golgi membrane" evidence=IDA

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0005078 "MAP-kinase scaffold activity" evidence=IDA;IPI

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005790 "smooth endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007254 "JNK cascade" evidence=IDA

GO:0007257 "activation of JUN kinase activity" evidence=IDA

GO:0007411 "axon guidance" evidence=IMP

GO:0007585 "respiratory gaseous exchange" evidence=IMP

GO:0008104 "protein localization" evidence=IMP

GO:0008432 "JUN kinase binding" evidence=IPI

GO:0009791 "post-embryonic development" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0016192 "vesicle-mediated transport" evidence=IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0019894 "kinesin binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=IPI

GO:0030425 "dendrite" evidence=IDA

GO:0030673 "axolemma" evidence=IDA

GO:0030900 "forebrain development" evidence=IMP

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=ISO;IPI

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IPI

GO:0042995 "cell projection" evidence=IEA

GO:0043005 "neuron projection" evidence=ISO

GO:0043507 "positive regulation of JUN kinase activity" evidence=IDA

GO:0045666 "positive regulation of neuron differentiation" evidence=ISO

GO:0046328 "regulation of JNK cascade" evidence=IDA

GO:0048286 "lung alveolus development" evidence=IMP

GO:0060425 "lung morphogenesis" evidence=IMP

UNIPROTKB|D4AD98 Mapk8ip3 "Mitogen-activated protein kinase 8 interacting protein 3" [Rattus norvegicus (taxid:10116)]

 Score = 565 (203.9 bits), Expect = 1.7e-53, P = 1.7e-53
 Identities = 100/139 (71%), Positives = 120/139 (86%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V 
Sbjct:   998 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVD 1057

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1058 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1117

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1118 HTHQHLQDVDIEPYVSKML 1136

GO:0000139 "Golgi membrane" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0005790 "smooth endoplasmic reticulum" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030673 "axolemma" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0060425 "lung morphogenesis" evidence=IEA

UNIPROTKB|D4A8Q8 Mapk8ip3 "Protein Mapk8ip3" [Rattus norvegicus (taxid:10116)]

 Score = 565 (203.9 bits), Expect = 1.7e-53, P = 1.7e-53
 Identities = 100/139 (71%), Positives = 120/139 (86%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V 
Sbjct:  1006 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVD 1065

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1066 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1125

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1126 HTHQHLQDVDIEPYVSKML 1144

GO:0000139 "Golgi membrane" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0005790 "smooth endoplasmic reticulum" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030673 "axolemma" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0060425 "lung morphogenesis" evidence=IEA

UNIPROTKB|F1PY25 MAPK8IP3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 560 (202.2 bits), Expect = 5.7e-53, P = 5.7e-53
 Identities = 99/139 (71%), Positives = 119/139 (85%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+GRV+ ALADG++AIF RG D QWDLS YH + LG PHHS+R +A V 
Sbjct:   992 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDSQWDLSNYHLMDLGHPHHSIRCMAVVC 1051

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             ++VWCGYKNK+HV+ PK++ + KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1052 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1111

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HT+QHLQDVDIEPYVSKML
Sbjct:  1112 HTHQHLQDVDIEPYVSKML 1130

GO:0060425 "lung morphogenesis" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030673 "axolemma" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0007585 "respiratory gaseous exchange" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0005790 "smooth endoplasmic reticulum" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

RGD|1311289 Spag9 "sperm associated antigen 9" [Rattus norvegicus (taxid:10116)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 99/141 (70%), Positives = 119/141 (84%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +  V+
Sbjct:   226 KLKDSILSIVHVKGIVLVALADGTLAIFHRGLDGQWDLSNYHLLDLGRPHHSIRCMTVVH 285

Query:    73 NKVWCGYKNKIHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMY 130
             +KVWCGY+NKI+VV PK++ +   KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y
Sbjct:   286 DKVWCGYRNKIYVVQPKAMKIEATKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLY 345

Query:   131 NAHTYQHLQDVDIEPYVSKML 151
             +AHTYQHLQDVDIEPYVSKML
Sbjct:   346 HAHTYQHLQDVDIEPYVSKML 366

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1MZ69 SPAG9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 556 (200.8 bits), Expect = 1.1e-52, P = 1.1e-52
 Identities = 99/139 (71%), Positives = 119/139 (85%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +  V+
Sbjct:   841 KLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVH 900

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             +KVWCGY+NKI+VV PK++ + KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:   901 DKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHA 960

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HTYQHLQDVDIEPYVSKML
Sbjct:   961 HTYQHLQDVDIEPYVSKML 979

GO:0090074 "negative regulation of protein homodimerization activity" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

GO:0051146 "striated muscle cell differentiation" evidence=IEA

GO:0048273 "mitogen-activated protein kinase p38 binding" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|O60271 SPAG9 "C-Jun-amino-terminal kinase-interacting protein 4" [Homo sapiens (taxid:9606)]

 Score = 556 (200.8 bits), Expect = 1.5e-52, P = 1.5e-52
 Identities = 99/139 (71%), Positives = 119/139 (85%)

Query:    13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
             K+ D+ L  VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +  V+
Sbjct:   998 KLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVH 1057

Query:    73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 132
             +KVWCGY+NKI+VV PK++ + KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct:  1058 DKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHA 1117

Query:   133 HTYQHLQDVDIEPYVSKML 151
             HTYQHLQDVDIEPYVSKML
Sbjct:  1118 HTYQHLQDVDIEPYVSKML 1136

GO:0007257 "activation of JUN kinase activity" evidence=IEA

GO:0008432 "JUN kinase binding" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0048273 "mitogen-activated protein kinase p38 binding" evidence=IEA

GO:0051146 "striated muscle cell differentiation" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

GO:0090074 "negative regulation of protein homodimerization activity" evidence=IEA

GO:0001669 "acrosomal vesicle" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0007283 "spermatogenesis" evidence=TAS

GO:0016021 "integral to membrane" evidence=TAS

GO:0042147 "retrograde transport, endosome to Golgi" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0042692 "muscle cell differentiation" evidence=TAS

GO:0051149 "positive regulation of muscle cell differentiation" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29EP6	JIP3_DROPS	No assigned EC number	0.6083	0.9337	0.1141	yes	N/A
Q9UPT6	JIP3_HUMAN	No assigned EC number	0.7266	0.9205	0.1040	yes	N/A
P34609	JIP_CAEEL	No assigned EC number	0.5539	0.9205	0.1201	yes	N/A
Q9GQF1	JIP3_DROME	No assigned EC number	0.6083	0.9337	0.1149	yes	N/A
Q58A65	JIP4_MOUSE	No assigned EC number	0.7122	0.9205	0.1052	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	151
KOG3522|consensus	925		99.81
KOG0649|consensus	325		99.6
KOG0274|consensus	537		99.33
PTZ00421	493	coronin; Provisional	99.32
KOG3522|consensus	925		99.3
KOG1539|consensus	910		99.24
KOG0274|consensus	537		99.21
KOG0281|consensus	499		99.18
KOG0306|consensus	888		99.17
KOG0271|consensus	480		99.14
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.14
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.12
KOG0291|consensus	893		99.1
PTZ00420	568	coronin; Provisional	99.06
KOG0266|consensus	456		99.05
KOG0316|consensus	307		99.02
KOG0276|consensus	794		99.0
KOG0310|consensus	487		98.98
KOG0316|consensus	307		98.98
KOG0285|consensus	460		98.97
KOG0266|consensus	456		98.96
KOG0315|consensus	311		98.94
KOG0308|consensus	735		98.92
KOG0291|consensus	893		98.91
KOG0639|consensus	705		98.91
KOG0646|consensus	476		98.89
PLN00181	793	protein SPA1-RELATED; Provisional	98.89
KOG0263|consensus	707		98.89
KOG0647|consensus	347		98.87
KOG1036|consensus	323		98.86
KOG0306|consensus	888		98.84
PTZ00421	493	coronin; Provisional	98.84
KOG0281|consensus	499		98.83
KOG0310|consensus	487		98.82
PLN00181	793	protein SPA1-RELATED; Provisional	98.82
KOG0278|consensus	334		98.82
KOG0272|consensus	459		98.8
KOG0265|consensus	338		98.78
KOG1036|consensus	323		98.78
PTZ00420	568	coronin; Provisional	98.78
KOG0301|consensus	745		98.77
KOG0273|consensus	524		98.76
KOG0318|consensus	603		98.74
KOG2110|consensus	391		98.73
KOG0315|consensus	311		98.72
KOG0276|consensus	794		98.72
KOG0286|consensus	343		98.71
KOG0296|consensus	399		98.71
KOG0279|consensus	315		98.71
KOG1446|consensus	311		98.7
KOG0286|consensus	343		98.69
KOG0279|consensus	315		98.68
KOG0271|consensus	480		98.68
KOG0643|consensus	327		98.68
KOG0313|consensus	423		98.67
KOG0294|consensus	362		98.67
KOG0284|consensus	464		98.66
KOG1273|consensus	405		98.66
KOG0319|consensus	775		98.66
KOG0265|consensus	338		98.66
KOG0646|consensus	476		98.65
KOG0275|consensus	508		98.65
KOG0263|consensus	707		98.64
KOG0277|consensus	311		98.63
KOG0640|consensus	430		98.62
KOG0303|consensus	472		98.59
KOG0285|consensus	460		98.58
KOG0649|consensus	325		98.57
KOG0284|consensus	464		98.55
KOG0275|consensus	508		98.54
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	98.54
KOG0282|consensus	503		98.54
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.53
KOG2111|consensus	346		98.53
KOG1274|consensus	933		98.53
KOG0289|consensus	506		98.53
KOG0273|consensus	524		98.52
KOG0292|consensus	1202		98.52
KOG2048|consensus	691		98.5
KOG0319|consensus	775		98.5
KOG0299|consensus	479		98.49
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.43
KOG0294|consensus	362		98.42
KOG1446|consensus	311		98.41
KOG0973|consensus	942		98.4
KOG0296|consensus	399		98.39
KOG0295|consensus	406		98.39
KOG0305|consensus	484		98.38
KOG1445|consensus	1012		98.38
KOG3881|consensus	412		98.37
KOG0301|consensus	745		98.37
KOG0264|consensus	422		98.34
KOG0305|consensus	484		98.31
KOG2695|consensus	425		98.3
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	98.3
KOG0295|consensus	406		98.29
KOG4283|consensus	397		98.29
KOG0282|consensus	503		98.27
KOG0272|consensus	459		98.26
KOG0318|consensus	603		98.24
KOG0278|consensus	334		98.24
KOG0641|consensus	350		98.19
KOG0264|consensus	422		98.19
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.17
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.17
KOG0293|consensus	519		98.17
KOG1445|consensus	1012		98.14
KOG0283|consensus	712		98.14
KOG0772|consensus	641		98.13
KOG0267|consensus	825		98.12
KOG2106|consensus	626		98.11
KOG0268|consensus	433		98.11
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.11
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.1
KOG2445|consensus	361		98.09
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.08
KOG0269|consensus	839		98.06
KOG0288|consensus	459		98.05
KOG2055|consensus	514		98.04
KOG0283|consensus	712		98.03
KOG1539|consensus	910		98.03
KOG0640|consensus	430		98.02
KOG0973|consensus	942		98.02
KOG1332|consensus	299		98.02
KOG1188|consensus	376		98.01
KOG0645|consensus	312		98.0
KOG0299|consensus	479		97.99
KOG1408|consensus	1080		97.99
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	97.98
KOG0300|consensus	481		97.98
KOG1332|consensus	299		97.96
KOG0302|consensus	440		97.95
KOG0289|consensus	506		97.95
KOG1407|consensus	313		97.95
KOG1188|consensus	376		97.94
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.94
KOG0308|consensus	735		97.91
KOG0288|consensus	459		97.9
KOG2106|consensus	626		97.89
KOG0313|consensus	423		97.89
KOG2445|consensus	361		97.88
KOG0270|consensus	463		97.88
PRK11028	330	6-phosphogluconolactonase; Provisional	97.87
KOG2096|consensus	420		97.86
KOG0643|consensus	327		97.85
KOG0772|consensus	641		97.85
KOG0647|consensus	347		97.84
KOG1007|consensus	370		97.84
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.84
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.84
KOG0322|consensus	323		97.83
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	97.83
KOG0277|consensus	311		97.82
KOG0642|consensus	577		97.79
KOG0645|consensus	312		97.75
KOG0293|consensus	519		97.75
KOG2096|consensus	420		97.72
KOG1273|consensus	405		97.72
KOG0269|consensus	839		97.71
KOG0292|consensus	1202		97.71
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.71
KOG1034|consensus	385		97.71
KOG0302|consensus	440		97.71
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.69
KOG2048|consensus	691		97.66
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	97.66
KOG2444|consensus	238		97.65
KOG0307|consensus	1049		97.64
KOG0268|consensus	433		97.64
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.64
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.63
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.58
KOG0290|consensus	364		97.57
KOG0639|consensus	705		97.57
KOG3914|consensus	390		97.51
KOG0321|consensus	720		97.49
KOG2111|consensus	346		97.48
KOG0321|consensus	720		97.47
PRK11028	330	6-phosphogluconolactonase; Provisional	97.47
KOG4547|consensus	541		97.43
KOG1275|consensus	1118		97.42
KOG1408|consensus	1080		97.42
COG1520	370	FOG: WD40-like repeat [Function unknown]	97.4
KOG1538|consensus	1081		97.4
KOG4328|consensus	498		97.4
KOG0270|consensus	463		97.38
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.38
KOG1517|consensus	1387		97.37
KOG2055|consensus	514		97.31
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.27
KOG1009|consensus	434		97.27
KOG1274|consensus	933		97.25
KOG4378|consensus	673		97.24
KOG0974|consensus	967		97.24
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	97.23
KOG1517|consensus	1387		97.21
KOG0290|consensus	364		97.2
KOG1407|consensus	313		97.16
KOG0303|consensus	472		97.1
KOG2321|consensus	703		97.05
KOG1034|consensus	385		97.03
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.01
KOG2110|consensus	391		97.0
KOG1963|consensus	792		96.99
KOG1272|consensus	545		96.95
KOG1587|consensus	555		96.94
KOG2919|consensus	406		96.9
COG2319	466	FOG: WD40 repeat [General function prediction only	96.82
KOG4283|consensus	397		96.8
KOG1240|consensus	1431		96.79
KOG1063|consensus	764		96.78
KOG1272|consensus	545		96.75
KOG3881|consensus	412		96.71
KOG4328|consensus	498		96.71
KOG1645|consensus	463		96.66
KOG1007|consensus	370		96.64
KOG0771|consensus	398		96.61
KOG0307|consensus	1049		96.61
KOG4378|consensus	673		96.6
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	96.58
KOG4190|consensus	1034		96.57
KOG4547|consensus	541		96.52
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.52
KOG0280|consensus	339		96.49
COG2319	466	FOG: WD40 repeat [General function prediction only	96.49
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.49
KOG1310|consensus	758		96.47
KOG0267|consensus	825		96.44
KOG2139|consensus	445		96.42
KOG2321|consensus	703		96.42
KOG1587|consensus	555		96.37
KOG0771|consensus	398		96.24
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	96.2
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	96.18
KOG0641|consensus	350		96.17
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.15
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	96.15
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.1
KOG2919|consensus	406		96.09
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	96.08
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.06
KOG0644|consensus	1113		96.04
KOG1409|consensus	404		96.02
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.02
KOG1963|consensus	792		95.97
KOG0300|consensus	481		95.94
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	95.91
KOG2695|consensus	425		95.86
KOG1063|consensus	764		95.73
KOG1240|consensus	1431		95.7
PHA02713	557	hypothetical protein; Provisional	95.62
KOG4190|consensus	1034		95.62
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	95.59
KOG1310|consensus	758		95.51
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	95.49
KOG0650|consensus	733		95.42
KOG2079|consensus	1206		95.41
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	95.31
KOG4499|consensus	310		95.29
KOG4714|consensus	319		95.18
COG3391	381	Uncharacterized conserved protein [Function unknow	95.11
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	94.91
KOG0974|consensus	967		94.9
KOG4227|consensus	609		94.75
KOG0322|consensus	323		94.73
KOG0882|consensus	558		94.71
KOG2315|consensus	566		94.68
KOG0650|consensus	733		94.66
KOG2139|consensus	445		94.62
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	94.59
KOG0280|consensus	339		94.58
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	94.54
KOG2114|consensus	933		94.52
PRK02888	635	nitrous-oxide reductase; Validated	94.38
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	94.29
PHA03098	534	kelch-like protein; Provisional	94.23
KOG1409|consensus	404		94.21
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	94.2
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	94.17
PHA03098	534	kelch-like protein; Provisional	94.13
KOG3914|consensus	390		93.94
KOG4649|consensus	354		93.84
KOG4714|consensus	319		93.79
PHA02790	480	Kelch-like protein; Provisional	93.79
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	93.75
KOG1524|consensus	737		93.66
KOG1064|consensus	2439		93.58
KOG0642|consensus	577		93.3
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	93.11
PRK02888	635	nitrous-oxide reductase; Validated	93.09
KOG1912|consensus	1062		93.02
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	92.95
KOG2394|consensus	636		92.9
KOG4649|consensus	354		92.82
COG1520	370	FOG: WD40-like repeat [Function unknown]	92.7
KOG1334|consensus	559		92.7
PRK05137	435	tolB translocation protein TolB; Provisional	92.66
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	92.57
COG4946	668	Uncharacterized protein related to the periplasmic	92.42
PLN02153	341	epithiospecifier protein	92.42
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	92.37
KOG3621|consensus	726		92.37
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	92.34
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	92.25
KOG1334|consensus	559		92.18
PHA02713	557	hypothetical protein; Provisional	92.17
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	92.16
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	91.9
KOG2066|consensus	846		91.82
KOG1354|consensus	433		91.55
KOG1524|consensus	737		91.41
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	91.32
KOG2063|consensus	877		91.3
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	91.24
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	91.23
PLN02193	470	nitrile-specifier protein	91.01
KOG4227|consensus	609		90.97
KOG2394|consensus	636		90.8
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	90.68
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	90.68
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	90.56
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	90.47
PRK01742	429	tolB translocation protein TolB; Provisional	90.31
KOG0644|consensus	1113		90.3
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	90.29
KOG1009|consensus	434		90.28
KOG2395|consensus	644		89.73
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	89.66
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	89.51
KOG1523|consensus	361		89.37
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	89.3
COG4946	668	Uncharacterized protein related to the periplasmic	89.2
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	88.96
KOG4640|consensus	665		88.83
PRK03629	429	tolB translocation protein TolB; Provisional	88.8
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	88.74
PRK04922	433	tolB translocation protein TolB; Provisional	88.74
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	88.54
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	88.39
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	88.37
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	88.19
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	87.93
PRK05137	435	tolB translocation protein TolB; Provisional	87.91
PRK03629	429	tolB translocation protein TolB; Provisional	87.68
COG3391	381	Uncharacterized conserved protein [Function unknow	87.29
KOG1912|consensus	1062		86.98
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	86.95
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	86.44
KOG1645|consensus	463		86.29
KOG2066|consensus	846		86.25
COG5276	370	Uncharacterized conserved protein [Function unknow	85.98
COG3292	671	Predicted periplasmic ligand-binding sensor domain	85.55
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	85.53
COG3292	671	Predicted periplasmic ligand-binding sensor domain	85.03
PRK01742	429	tolB translocation protein TolB; Provisional	84.45
KOG0379|consensus	482		84.03
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	83.9
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	83.81
KOG1538|consensus	1081		83.8
KOG1523|consensus	361		83.46
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	83.24
KOG2114|consensus	933		83.21
KOG1064|consensus	2439		83.01
PRK02889	427	tolB translocation protein TolB; Provisional	82.93
KOG1354|consensus	433		82.93
PF08309	42	LVIVD: LVIVD repeat; InterPro: IPR013211 This repe	82.69
KOG1275|consensus	1118		81.54
PHA02790	480	Kelch-like protein; Provisional	81.48
PF07494	24	Reg_prop: Two component regulator propeller; Inter	81.33
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	81.31
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	80.65
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	80.6
KOG1900|consensus	1311		80.27

>KOG3522|consensus

Probab=99.81  E-value=2.3e-20  Score=162.32  Aligned_cols=145  Identities=26%  Similarity=0.417  Sum_probs=134.7

Q ss_pred             CCceeeeeeCC--CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCe
Q psy16020          5 HPTPYPLNKIL--DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNK   82 (151)
Q Consensus         5 ~~~~l~~i~l~--~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~   82 (151)
                      .++++.+-.-|  .++.++.+..+.+++|+-||++++|-|..+|.||.+.+..++++.  .||+..++.++.+|+++|++
T Consensus       569 ~ke~~~~~~spe~~~v~~l~~ss~Slgagl~dgt~a~y~rap~gSwd~ep~~~~~~g~--lPvrsla~~ed~~was~gG~  646 (925)
T KOG3522|consen  569 IKEVTSEPPSPEHESVKLLLFSSGSLGAGLIDGTLAVYGRAPSGSWDGEPNISIPTGS--LPVRSLAFQEDFVWASEGGC  646 (925)
T ss_pred             ccceeccCCCCchhhhhhhhccccccccCccCCccccccCCCCCCCCCCCccccccCC--ccccchhhhhceeeeecCCc
Confidence            34555555555  589999999999999999999999999999999999777889998  99999999999999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccccccC
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML  151 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~l  151 (151)
                      |+||..+|...++..++|......|++|.+.++|||+++.....++++|++|+.++|+||++..++.||
T Consensus       647 V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtetl~hlqd~niaT~vt~~l  715 (925)
T KOG3522|consen  647 VHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTETLWHLQDSNIATSVTVDL  715 (925)
T ss_pred             eEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccccCCccccccCcceeecC
Confidence            999999999999999999888889999999999999999999999999999999999999999998875

>KOG0649|consensus

Probab=99.60  E-value=2.3e-14  Score=111.18  Aligned_cols=126  Identities=17%  Similarity=0.214  Sum_probs=102.4

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCC-------CCCCCCCcceEEEeCCCCCceEEEeee--CCE-EEEEeCCeEEE
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGP-------DGQWDLSKYHTVTLGLPHHSVRSLAAV--YNK-VWCGYKNKIHV   85 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~-------~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~-Lw~g~~n~I~v   85 (151)
                      .+|+++.+++..+..|. ||.|..|.|++       ...|....|....... -..|++|.+.  +|. +.+|-++.+|-
T Consensus        63 gpiy~~~f~d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~e-vPeINam~ldP~enSi~~AgGD~~~y~  140 (325)
T KOG0649|consen   63 GPIYYLAFHDDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVE-VPEINAMWLDPSENSILFAGGDGVIYQ  140 (325)
T ss_pred             CCeeeeeeehhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCccc-CCccceeEeccCCCcEEEecCCeEEEE
Confidence            49999999987777766 89999999974       3358888877664322 2668999997  344 55665568999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEE-eCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTW-AGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~-~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                      +|.++|++++++.+|+|   +|++++. ..++--+|+++|+++|+||++|.++.+.|  +++.+
T Consensus       141 ~dlE~G~i~r~~rGHtD---YvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i--e~yk~  199 (325)
T KOG0649|consen  141 VDLEDGRIQREYRGHTD---YVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI--EPYKN  199 (325)
T ss_pred             EEecCCEEEEEEcCCcc---eeeeeeecccCcceeecCCCccEEEEeccccceeEEe--ccccC
Confidence            99999999999999998   9999988 45566779999999999999999999999  55544

>KOG0274|consensus

Probab=99.33  E-value=2.7e-11  Score=104.28  Aligned_cols=129  Identities=15%  Similarity=0.101  Sum_probs=109.2

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCCEEEEEeC
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNKVWCGYK   80 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~~Lw~g~~   80 (151)
                      ..+.+|.+.+... ++|.||.-.+..+.-|..|-+|.||+..        ++..+.+-. +..||+||...++.+..|+.
T Consensus       278 ~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~--------n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~  349 (537)
T KOG0274|consen  278 CSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVT--------NGACLNLLRGHTGPVNCVQLDEPLLVSGSY  349 (537)
T ss_pred             cCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEecc--------CcceEEEeccccccEEEEEecCCEEEEEec
Confidence            5688999999955 7888888888777777889999998764        455555433 67999999999999999994


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc-ceeeeEe
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY-QHLQDVD  142 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~-~~l~~id  142 (151)
                       +.|.|||+.++++++++.+|+.   .|.++.+.+....+|++-|.+|++||.++. ++++.+.
T Consensus       350 d~~v~VW~~~~~~cl~sl~gH~~---~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~  410 (537)
T KOG0274|consen  350 DGTVKVWDPRTGKCLKSLSGHTG---RVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQ  410 (537)
T ss_pred             CceEEEEEhhhceeeeeecCCcc---eEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhc
Confidence             6899999999999999999986   999998876577889999999999999998 7776653

>PTZ00421 coronin; Provisional

Probab=99.32  E-value=2.2e-10  Score=97.96  Aligned_cols=123  Identities=15%  Similarity=0.185  Sum_probs=97.3

Q ss_pred             CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCC-CCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEe
Q psy16020         16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQ-WDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVD   87 (151)
Q Consensus        16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~-wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid   87 (151)
                      ++|.++.+.+   +.+++|..||+|.+|+...++. .+...+ ...+..+..+|.++.+..   +.|..|+ ++.|.+||
T Consensus        76 ~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~-l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWD  154 (493)
T PTZ00421         76 GPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDP-IVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWD  154 (493)
T ss_pred             CCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcc-eEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEE
Confidence            6899999975   4688999999999999865431 111111 234555569999999973   4577766 46899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .++++....+.+|.+   .|.++.++++| ..++++.|+.|++||.++.+.+.++.
T Consensus       155 l~tg~~~~~l~~h~~---~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~  207 (493)
T PTZ00421        155 VERGKAVEVIKCHSD---QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVE  207 (493)
T ss_pred             CCCCeEEEEEcCCCC---ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEe
Confidence            999999999999976   89999998665 47899999999999999999888775

>KOG3522|consensus

Probab=99.30  E-value=6.8e-12  Score=110.10  Aligned_cols=132  Identities=17%  Similarity=0.269  Sum_probs=120.3

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLK   95 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~   95 (151)
                      .+|.+|.|.++.||+++++|+..+|. ...+.|++++-...+.+....|++.|.-+++++||  .|.|.|.+..|+.+..
T Consensus       669 ~~Vthm~~~~~gVwvafasG~~~rlf-htetl~hlqd~niaT~vt~~lP~~kllsv~~rl~c--~gl~~V~~~~~l~v~~  745 (925)
T KOG3522|consen  669 HSVTHMLYLDNGVWVAFASGDEERLF-HTETLWHLQDSNIATSVTVDLPFGKLLSVPGRLWC--QGLLMVLTSLTLLVAL  745 (925)
T ss_pred             ceEEEEEeeCCceEEEEcCCCEEEEe-cccccCCccccccCcceeecCCCcccccCCCcccc--cceeEEeccceeEEEe
Confidence            48999999999999999999999998 67778988777666665545999999999999999  9999999999999999


Q ss_pred             EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccccccC
Q psy16020         96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML  151 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~l  151 (151)
                      .+..-.+ ...+.+|..+..+||++...+..+..+|..|++...+.+..|++++||
T Consensus       746 ~v~~~q~-~k~~~~~~vS~~~~~~~vk~~~~~~~~H~~~~~~~~e~~~~~p~~~~~  800 (925)
T KOG3522|consen  746 PVPRLQD-SKVTGRMMVSYHAVWSPVKFSAHATALHEKTKDKSREVLAPPPVPQML  800 (925)
T ss_pred             eeeeccC-CceeeeeeeecccccccchhhhhhhhhccchHhhhhhccCCCCCchhh
Confidence            9998777 677999999999999999999999999999999999999999999996

>KOG1539|consensus

Probab=99.24  E-value=2.8e-11  Score=105.97  Aligned_cols=124  Identities=25%  Similarity=0.412  Sum_probs=101.8

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCC----------------------------------CC---CCCCCcce---EE
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGP----------------------------------DG---QWDLSKYH---TV   56 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~----------------------------------~~---~wd~~~~~---~i   56 (151)
                      ...|+.+++|.+|+|.++|+|-+|...+                                  +|   .||+....   .+
T Consensus       452 ~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l  531 (910)
T KOG1539|consen  452 TAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSL  531 (910)
T ss_pred             EEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeee
Confidence            4556778899999999999999997653                                  11   47776543   23


Q ss_pred             EeCCCCCceEEEeee--CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeC
Q psy16020         57 TLGLPHHSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNA  132 (151)
Q Consensus        57 ~l~~~~~pV~~m~~v--~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~  132 (151)
                      .++   .++.+|...  .+-+.++|+. .|.++|..|.++.|.|.+|++   .|+.|.++++|-| ++.+.|++||+||.
T Consensus       532 ~l~---~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~n---ritd~~FS~DgrWlisasmD~tIr~wDl  605 (910)
T KOG1539|consen  532 RLG---SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGN---RITDMTFSPDGRWLISASMDSTIRTWDL  605 (910)
T ss_pred             ccC---CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccc---ceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence            344   688899886  3568888987 799999999999999999997   9999999999996 68889999999999


Q ss_pred             CccceeeeEeCCcc
Q psy16020        133 HTYQHLQDVDIEPY  146 (151)
Q Consensus       133 ~t~~~l~~idi~~~  146 (151)
                      -|..++--+-+..+
T Consensus       606 pt~~lID~~~vd~~  619 (910)
T KOG1539|consen  606 PTGTLIDGLLVDSP  619 (910)
T ss_pred             cCcceeeeEecCCc
Confidence            99999887766544

>KOG0274|consensus

Probab=99.21  E-value=1.6e-10  Score=99.55  Aligned_cols=131  Identities=17%  Similarity=0.165  Sum_probs=109.1

Q ss_pred             CCCCCceeeeee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe
Q psy16020          2 EYPHPTPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY   79 (151)
Q Consensus         2 ~~~~~~~l~~i~-l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~   79 (151)
                      +++.+++++-+. ..++|.|+.+.++.+|.|..||+|.||+....     +  ..-.+..+...|.++.+-. +.++-|+
T Consensus       317 ~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~-----~--cl~sl~gH~~~V~sl~~~~~~~~~Sgs  389 (537)
T KOG0274|consen  317 DVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTG-----K--CLKSLSGHTGRVYSLIVDSENRLLSGS  389 (537)
T ss_pred             eccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhhc-----e--eeeeecCCcceEEEEEecCcceEEeee
Confidence            356789999999 67999999999999999999999999987511     1  1224444669999997777 7888887


Q ss_pred             -CCeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         80 -KNKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        80 -~n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                       +..|.+||.+++ ++..++.+|+.   .+..|.+.+.- ++|.+-|++|++||..++++++.+.-
T Consensus       390 ~D~~IkvWdl~~~~~c~~tl~~h~~---~v~~l~~~~~~-Lvs~~aD~~Ik~WD~~~~~~~~~~~~  451 (537)
T KOG0274|consen  390 LDTTIKVWDLRTKRKCIHTLQGHTS---LVSSLLLRDNF-LVSSSADGTIKLWDAEEGECLRTLEG  451 (537)
T ss_pred             eccceEeecCCchhhhhhhhcCCcc---cccccccccce-eEeccccccEEEeecccCceeeeecc
Confidence             667999999999 99999999975   67777775444 88999999999999999999999864

>KOG0281|consensus

Probab=99.18  E-value=2.7e-11  Score=98.12  Aligned_cols=134  Identities=15%  Similarity=0.182  Sum_probs=104.0

Q ss_pred             CCCceeeeee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCC--------------------------------CCCCC
Q psy16020          4 PHPTPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPD--------------------------------GQWDL   50 (151)
Q Consensus         4 ~~~~~l~~i~-l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~--------------------------------~~wd~   50 (151)
                      .+.+|+..+. ...+|+||-|.+.-+..|.+|.+|.||+++.+                                ..||.
T Consensus       225 n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm  304 (499)
T KOG0281|consen  225 NSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDM  304 (499)
T ss_pred             ccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEec
Confidence            3455555554 34799999999987888889999999998732                                24777


Q ss_pred             CcceEEEe----CCCCCceEEEeeeCCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC
Q psy16020         51 SKYHTVTL----GLPHHSVRSLAAVYNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS  125 (151)
Q Consensus        51 ~~~~~i~l----~~~~~pV~~m~~v~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~  125 (151)
                      ..|..+.+    -.+...|+.+.+-++.+-.|+|+ +|.+||+.|++..+++.+|.+   .|-|+.+- +...+|++.|.
T Consensus       305 ~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkR---GIAClQYr-~rlvVSGSSDn  380 (499)
T KOG0281|consen  305 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR---GIACLQYR-DRLVVSGSSDN  380 (499)
T ss_pred             cCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccc---cceehhcc-CeEEEecCCCc
Confidence            66654432    11347777777777777778876 799999999999999999986   89998885 55578999999


Q ss_pred             eEEEEeCCccceeeeE
Q psy16020        126 TLRMYNAHTYQHLQDV  141 (151)
Q Consensus       126 ~l~lwd~~t~~~l~~i  141 (151)
                      +||+||++.+.+|.-+
T Consensus       381 tIRlwdi~~G~cLRvL  396 (499)
T KOG0281|consen  381 TIRLWDIECGACLRVL  396 (499)
T ss_pred             eEEEEeccccHHHHHH
Confidence            9999999998877543

>KOG0306|consensus

Probab=99.17  E-value=3.8e-10  Score=98.30  Aligned_cols=123  Identities=15%  Similarity=0.161  Sum_probs=104.8

Q ss_pred             eeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CE-EEEEeCC-eEE
Q psy16020         10 PLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NK-VWCGYKN-KIH   84 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~-Lw~g~~n-~I~   84 (151)
                      +.++|++.|+|+.+.  +..+-|||-|.++-||-.+       .....+.|..++-||+||.+.. ++ +-.|+.+ +|.
T Consensus       503 rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflD-------tlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVK  575 (888)
T KOG0306|consen  503 RTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLD-------TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVK  575 (888)
T ss_pred             eEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEec-------ceeeeeeecccccceeEEeccCCcCeEEeccCCCceE
Confidence            678899999999998  4579999999999999886       1224678888899999999974 44 4445544 799


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ||-++=|.+-++|-||.|   +|.++.+.+..- +.|+++|+.++=||...++++|.++
T Consensus       576 iWGLdFGDCHKS~fAHdD---Svm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~  631 (888)
T KOG0306|consen  576 IWGLDFGDCHKSFFAHDD---SVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLD  631 (888)
T ss_pred             EeccccchhhhhhhcccC---ceeEEEEcccceeEEEecCcceEEeechhhhhhheeec
Confidence            999999999999999987   888888887644 7799999999999999999999986

>KOG0271|consensus

Probab=99.14  E-value=4.4e-10  Score=91.90  Aligned_cols=125  Identities=17%  Similarity=0.208  Sum_probs=96.4

Q ss_pred             eeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee------CCEEEEE
Q psy16020          8 PYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV------YNKVWCG   78 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v------~~~Lw~g   78 (151)
                      ++...|=+ .=|+|+...++  .+-.|.-||+|.+|+...+++      .--.|..++.+|++++.-      +.+..++
T Consensus       149 p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~------~g~~l~gH~K~It~Lawep~hl~p~~r~las  222 (480)
T KOG0271|consen  149 PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQ------IGRALRGHKKWITALAWEPLHLVPPCRRLAS  222 (480)
T ss_pred             cceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCc------ccccccCcccceeEEeecccccCCCccceec
Confidence            33344423 46788877654  577788899999998765432      122455567999999884      2343344


Q ss_pred             e--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         79 Y--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        79 ~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +  +|.|+|||+.-++++..+.+|+.   +|+|+...|+|...|++.|.+|++|++..+.++.++
T Consensus       223 ~skDg~vrIWd~~~~~~~~~lsgHT~---~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~l  284 (480)
T KOG0271|consen  223 SSKDGSVRIWDTKLGTCVRTLSGHTA---SVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCREL  284 (480)
T ss_pred             ccCCCCEEEEEccCceEEEEeccCcc---ceEEEEEcCCceEEecCCCceEEEEEccchhHHHhh
Confidence            3  47999999999999999999997   999999999999999999999999999987776655

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.14  E-value=4.2e-09  Score=78.89  Aligned_cols=128  Identities=19%  Similarity=0.196  Sum_probs=95.5

Q ss_pred             CCceeeeee-CCCceeeeEEeC-CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EEEEEe
Q psy16020          5 HPTPYPLNK-ILDTALPPVHVQ-GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~-l~~~V~~i~~~~-~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~Lw~g~   79 (151)
                      ..+++..++ .++.|.++.+.+ +.++++.. +|.|.+|+....     +....+.  .+..+|+++.+..+  .+++++
T Consensus       124 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~-----~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~  196 (289)
T cd00200         124 TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG-----KCVATLT--GHTGEVNSVAFSPDGEKLLSSS  196 (289)
T ss_pred             CcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccc-----ccceeEe--cCccccceEEECCCcCEEEEec
Confidence            345566666 346899999987 45555555 999999987521     1222333  23379999999864  788887


Q ss_pred             -CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         80 -KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 -~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       ++.|++||..+++..+.+..|..   .|.++.+.+++. +++++.++.|++||..+.+.+..+.
T Consensus       197 ~~~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~  258 (289)
T cd00200         197 SDGTIKLWDLSTGKCLGTLRGHEN---GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS  258 (289)
T ss_pred             CCCcEEEEECCCCceecchhhcCC---ceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc
Confidence             56899999999999999987864   899999998655 5555559999999999888887775

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.12  E-value=9.5e-09  Score=76.94  Aligned_cols=125  Identities=15%  Similarity=0.142  Sum_probs=93.5

Q ss_pred             ceeeeeeCC-CceeeeEEeCC-eEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-C
Q psy16020          7 TPYPLNKIL-DTALPPVHVQG-RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-K   80 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~~~~-~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~   80 (151)
                      +.+..++-+ ..|.++.+.++ +++++.+ +|.|.+|+....     +...  .+..+..+|+++.+..  ..+.+++ +
T Consensus        84 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~  156 (289)
T cd00200          84 ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-----KCLT--TLRGHTDWVNSVAFSPDGTFVASSSQD  156 (289)
T ss_pred             cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-----EEEE--EeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence            455566554 48999998764 4555555 999999987521     1222  2223347899999976  3466666 6


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +.|++||.++++..+.+..|..   .|.++.+.+++ ..++++.++.|++||.++.+.+..+
T Consensus       157 ~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~  215 (289)
T cd00200         157 GTIKLWDLRTGKCVATLTGHTG---EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTL  215 (289)
T ss_pred             CcEEEEEccccccceeEecCcc---ccceEEECCCcCEEEEecCCCcEEEEECCCCceecch
Confidence            7999999999999999998854   89999999886 5667777999999999988887776

>KOG0291|consensus

Probab=99.10  E-value=5.4e-09  Score=91.27  Aligned_cols=131  Identities=17%  Similarity=0.224  Sum_probs=107.7

Q ss_pred             CCCCCceeeeeeCC-CceeeeEEe--CCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EE
Q psy16020          2 EYPHPTPYPLNKIL-DTALPPVHV--QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KV   75 (151)
Q Consensus         2 ~~~~~~~l~~i~l~-~~V~~i~~~--~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~L   75 (151)
                      |+|.-.++|++.+. .+|..+..+  ++.+-+|.+. |+|.||+|.+       +...++...+...++||++..+  .+
T Consensus       293 elP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs-------EsYVlKQQgH~~~i~~l~YSpDgq~i  365 (893)
T KOG0291|consen  293 ELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS-------ESYVLKQQGHSDRITSLAYSPDGQLI  365 (893)
T ss_pred             ecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeec-------cceeeeccccccceeeEEECCCCcEE
Confidence            68889999999999 699999887  6777777655 8999999862       4456676655689999999864  58


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ..|++ ++|+|||..++-+.-+|.-|+.   .|+.+.+. ...+.+|.+-|+++|.||..-|..-.++-
T Consensus       366 aTG~eDgKVKvWn~~SgfC~vTFteHts---~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft  431 (893)
T KOG0291|consen  366 ATGAEDGKVKVWNTQSGFCFVTFTEHTS---GVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFT  431 (893)
T ss_pred             EeccCCCcEEEEeccCceEEEEeccCCC---ceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeec
Confidence            88885 7999999999999999999985   78888777 34558899999999999999877766664

>PTZ00420 coronin; Provisional

Probab=99.06  E-value=3e-08  Score=86.12  Aligned_cols=130  Identities=7%  Similarity=0.057  Sum_probs=94.7

Q ss_pred             eeeeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCC--CCCCcceEEEeCCCCCceEEEeeeC--CEE-EEE
Q psy16020          8 PYPLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQ--WDLSKYHTVTLGLPHHSVRSLAAVY--NKV-WCG   78 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~--wd~~~~~~i~l~~~~~pV~~m~~v~--~~L-w~g   78 (151)
                      ++..++-+ ++|.++.+++   +.+..|..||+|.+|+...++.  -....+ ...+..+..+|+++.+..  ..+ ..|
T Consensus        66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p-~~~L~gH~~~V~sVaf~P~g~~iLaSg  144 (568)
T PTZ00420         66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDP-QCILKGHKKKISIIDWNPMNYYIMCSS  144 (568)
T ss_pred             eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccc-eEEeecCCCcEEEEEECCCCCeEEEEE
Confidence            44445433 7999999975   4688999999999999864331  111111 123444568999999985  333 444


Q ss_pred             e-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         79 Y-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        79 ~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      + ++.|.+||.++++...++. |..   .|.++.++.+|- +++++.|+.|++||.++.+.++++.
T Consensus       145 S~DgtIrIWDl~tg~~~~~i~-~~~---~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~  206 (568)
T PTZ00420        145 GFDSFVNIWDIENEKRAFQIN-MPK---KLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFH  206 (568)
T ss_pred             eCCCeEEEEECCCCcEEEEEe-cCC---cEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            4 5799999999999888886 433   799999986655 5667789999999999999888774

>KOG0266|consensus

Probab=99.05  E-value=8.2e-09  Score=87.36  Aligned_cols=117  Identities=19%  Similarity=0.242  Sum_probs=91.1

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t   90 (151)
                      ..|.++.+.++  ++..|..|++|.+|+...++    ...+  .+-.+..+|+|+.+..  +.+..|++ +.|++||.++
T Consensus       204 ~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~----~~~~--~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~  277 (456)
T KOG0266|consen  204 RGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG----RNLK--TLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT  277 (456)
T ss_pred             cceeeeEECCCCcEEEEecCCceEEEeeccCCC----eEEE--EecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC
Confidence            58888888654  68888888999999884222    2223  3334569999999974  45666664 5899999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc--eeeeE
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ--HLQDV  141 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~--~l~~i  141 (151)
                      +++.+.+++|++   .|+.+.+.+++- .++.+.|+.|++||..+++  ++.++
T Consensus       278 ~~~~~~l~~hs~---~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~  328 (456)
T KOG0266|consen  278 GECVRKLKGHSD---GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLL  328 (456)
T ss_pred             CeEEEeeeccCC---ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecc
Confidence            999999999986   899999996654 6677889999999999998  34444

>KOG0316|consensus

Probab=99.02  E-value=6.8e-09  Score=80.62  Aligned_cols=125  Identities=17%  Similarity=0.180  Sum_probs=97.4

Q ss_pred             eeeeeeCC-CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee-CCEEEEEeCC-
Q psy16020          8 PYPLNKIL-DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV-YNKVWCGYKN-   81 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v-~~~Lw~g~~n-   81 (151)
                      .++.++-. .+|....|+  +|+..++..|-+|..|....+        ..+ +...+...|.-.+.. ++.=.|+||+ 
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg--------~liktYsghG~EVlD~~~s~Dnskf~s~GgD   80 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG--------ALIKTYSGHGHEVLDAALSSDNSKFASCGGD   80 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCCCceEEeeccccc--------ceeeeecCCCceeeeccccccccccccCCCC
Confidence            45556544 699999995  678999999999999865321        123 333344777777776 4667777763 


Q ss_pred             -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCc--cceeeeEeC
Q psy16020         82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHT--YQHLQDVDI  143 (151)
Q Consensus        82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t--~~~l~~idi  143 (151)
                       .|++||.+||++.++|-+|-   .+|+.+.+-. ..|.+|++-|+.+|+||.++  ++++|.+|-
T Consensus        81 k~v~vwDV~TGkv~Rr~rgH~---aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQilde  143 (307)
T KOG0316|consen   81 KAVQVWDVNTGKVDRRFRGHL---AQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDE  143 (307)
T ss_pred             ceEEEEEcccCeeeeeccccc---ceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhh
Confidence             59999999999999999996   4999999984 46799999999999999986  899998864

>KOG0276|consensus

Probab=99.00  E-value=4.7e-09  Score=90.22  Aligned_cols=109  Identities=17%  Similarity=0.228  Sum_probs=89.6

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeCC-eEEEEeCCC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYKN-KIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~n-~I~vid~~t   90 (151)
                      +.|-++-.++-  -+.++|=||++.+|+...     -...+.+.+.+  .|||+-.++..+  +-+|+++ +|.|+|-.|
T Consensus        14 dRVKsVd~HPtePw~la~LynG~V~IWnyet-----qtmVksfeV~~--~PvRa~kfiaRknWiv~GsDD~~IrVfnynt   86 (794)
T KOG0276|consen   14 DRVKSVDFHPTEPWILAALYNGDVQIWNYET-----QTMVKSFEVSE--VPVRAAKFIARKNWIVTGSDDMQIRVFNYNT   86 (794)
T ss_pred             CceeeeecCCCCceEEEeeecCeeEEEeccc-----ceeeeeeeecc--cchhhheeeeccceEEEecCCceEEEEeccc
Confidence            56777766654  599999999999998752     12346678877  999999999755  5566665 899999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t  134 (151)
                      ++-.++|++|+|   .|.++++-+.. -.+|.++|.+|++||.+.
T Consensus        87 ~ekV~~FeAH~D---yIR~iavHPt~P~vLtsSDDm~iKlW~we~  128 (794)
T KOG0276|consen   87 GEKVKTFEAHSD---YIRSIAVHPTLPYVLTSSDDMTIKLWDWEN  128 (794)
T ss_pred             ceeeEEeecccc---ceeeeeecCCCCeEEecCCccEEEEeeccC
Confidence            999999999998   99999998663 378999999999999884

>KOG0310|consensus

Probab=98.98  E-value=4.3e-09  Score=87.83  Aligned_cols=128  Identities=15%  Similarity=0.168  Sum_probs=99.2

Q ss_pred             eCCCceeeeEEe-CCeEE-EEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEeC-C-eEEE
Q psy16020         13 KILDTALPPVHV-QGRVV-CALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYK-N-KIHV   85 (151)
Q Consensus        13 ~l~~~V~~i~~~-~~~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~~-n-~I~v   85 (151)
                      +.++.|.+..+. +|+++ +|-+.|.|-||+.++        ...+ .+..++.||+..-+.  ++++.+.++ + .+..
T Consensus        66 rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~--------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~  137 (487)
T KOG0310|consen   66 RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS--------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKY  137 (487)
T ss_pred             hhccceeEEEeecCCeEEEccCCcCcEEEecccc--------HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEE
Confidence            355778888775 45555 555679999998531        1111 344467999998886  577666653 3 6999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCcc-ceeeeEeCCccccccC
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTY-QHLQDVDIEPYVSKML  151 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~-~~l~~idi~~~v~~~l  151 (151)
                      ||+.+..++..+.+|+|   +|.|..+++.  .+.+|++.|+.||+||+++. +...++|...+|..+|
T Consensus       138 ~d~s~a~v~~~l~~htD---YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl  203 (487)
T KOG0310|consen  138 WDLSTAYVQAELSGHTD---YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVL  203 (487)
T ss_pred             EEcCCcEEEEEecCCcc---eeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEE
Confidence            99999998779999998   9999998843  47899999999999999998 9999999999988764

>KOG0316|consensus

Probab=98.98  E-value=5.4e-09  Score=81.18  Aligned_cols=128  Identities=15%  Similarity=0.148  Sum_probs=98.9

Q ss_pred             Cceeeeee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020          6 PTPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KN   81 (151)
Q Consensus         6 ~~~l~~i~-l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n   81 (151)
                      .++++-+. -.|.|.+|.-.+..+.+|..||++..|+... |+-      .-.--.  .||+|+.+..  +.+-+|| +.
T Consensus       135 ~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~-G~l------~sDy~g--~pit~vs~s~d~nc~La~~l~s  205 (307)
T KOG0316|consen  135 FEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRK-GTL------SSDYFG--HPITSVSFSKDGNCSLASSLDS  205 (307)
T ss_pred             CCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeec-cee------ehhhcC--CcceeEEecCCCCEEEEeeccc
Confidence            44555553 4489999999999999999999999998753 311      111112  8999999974  6688888 67


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .++.+|-+||+++++..+|.+.+-.+.|-..-.+.-.+|+++|+.+.+||......+..+.
T Consensus       206 tlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~  266 (307)
T KOG0316|consen  206 TLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLS  266 (307)
T ss_pred             eeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeec
Confidence            8999999999999999999986666666444455667899999999999998766665553

>KOG0285|consensus

Probab=98.97  E-value=5e-09  Score=85.25  Aligned_cols=126  Identities=14%  Similarity=0.129  Sum_probs=101.4

Q ss_pred             CCCceeeeeeCCCceeeeEEe------------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee
Q psy16020          4 PHPTPYPLNKILDTALPPVHV------------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV   71 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~------------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v   71 (151)
                      .+...+|-|+-.++|..|.-+            +.+|+.|.-|++|..|+..++.       ..+.+-.++.+||||..+
T Consensus       256 Dst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk-------t~~tlt~hkksvral~lh  328 (460)
T KOG0285|consen  256 DSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK-------TMITLTHHKKSVRALCLH  328 (460)
T ss_pred             cceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc-------eeEeeecccceeeEEecC
Confidence            456778888888877777532            5589999999999999876432       345666677999999998


Q ss_pred             CCE-EEEE-eCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020         72 YNK-VWCG-YKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        72 ~~~-Lw~g-~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      .++ ++++ |.+.|.-|+..-+...+.+++|+.   -|++|....++|++++++.+.+..||.+++-.-|
T Consensus       329 P~e~~fASas~dnik~w~~p~g~f~~nlsgh~~---iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ  395 (460)
T KOG0285|consen  329 PKENLFASASPDNIKQWKLPEGEFLQNLSGHNA---IINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQ  395 (460)
T ss_pred             CchhhhhccCCccceeccCCccchhhccccccc---eeeeeeeccCceEEEcCCceEEEEEecCcCcccc
Confidence            654 4544 458999999999999999999975   8999999999999999999999999999843333

>KOG0266|consensus

Probab=98.96  E-value=3.8e-08  Score=83.34  Aligned_cols=130  Identities=18%  Similarity=0.170  Sum_probs=103.8

Q ss_pred             CCceeeeee-CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020          5 HPTPYPLNK-ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~-l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      ..++++.++ .++.|+++.+.+  +.+..|..||++.+|+... |    +.  .-.+..+..+|+++.+..  +.|++|+
T Consensus       235 ~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-~----~~--~~~l~~hs~~is~~~f~~d~~~l~s~s  307 (456)
T KOG0266|consen  235 DGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-G----EC--VRKLKGHSDGISGLAFSPDGNLLVSAS  307 (456)
T ss_pred             CCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-C----eE--EEeeeccCCceEEEEECCCCCEEEEcC
Confidence            346788886 458999999964  4799999999999998763 1    11  223444458999999973  6699888


Q ss_pred             -CCeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         80 -KNKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 -~n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       ++.|++||..+++  +.+.+..+.... .+++..+++++. .++...|+.+++||..+.+.+.+..
T Consensus       308 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~  373 (456)
T KOG0266|consen  308 YDGTIRVWDLETGSKLCLKLLSGAENSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYT  373 (456)
T ss_pred             CCccEEEEECCCCceeeeecccCCCCCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeec
Confidence             5789999999999  678888887644 799999998887 6788889999999999988887774

>KOG0315|consensus

Probab=98.94  E-value=2.5e-08  Score=77.98  Aligned_cols=125  Identities=10%  Similarity=0.114  Sum_probs=97.5

Q ss_pred             CCCCCceeeeeeCC-CceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEE
Q psy16020          2 EYPHPTPYPLNKIL-DTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWC   77 (151)
Q Consensus         2 ~~~~~~~l~~i~l~-~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~   77 (151)
                      |-.+..|...|+-+ ++|..|.-.+. +.+++.++-.|.+|+.++...    .| ......+...|+.+.+. +++ +|.
T Consensus        26 qa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np----~P-v~t~e~h~kNVtaVgF~~dgrWMyT  100 (311)
T KOG0315|consen   26 QALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNP----NP-VATFEGHTKNVTAVGFQCDGRWMYT  100 (311)
T ss_pred             ehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCC----Cc-eeEEeccCCceEEEEEeecCeEEEe
Confidence            34678999999999 58988877654 567777799999999975321    12 22333344889998886 455 888


Q ss_pred             EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcc
Q psy16020         78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~  135 (151)
                      |++ +.++|||.+++++++.|+ |.   ++|++++.-++ +=++++.+++.|++||..+-
T Consensus       101 gseDgt~kIWdlR~~~~qR~~~-~~---spVn~vvlhpnQteLis~dqsg~irvWDl~~~  156 (311)
T KOG0315|consen  101 GSEDGTVKIWDLRSLSCQRNYQ-HN---SPVNTVVLHPNQTELISGDQSGNIRVWDLGEN  156 (311)
T ss_pred             cCCCceEEEEeccCcccchhcc-CC---CCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence            885 699999999999999998 54   49999998865 44999999999999999864

>KOG0308|consensus

Probab=98.92  E-value=1.6e-08  Score=87.09  Aligned_cols=132  Identities=17%  Similarity=0.187  Sum_probs=98.5

Q ss_pred             ceeeeeeCC-CceeeeEE-eCC--eEEEEecCCcEEEEEcCCCCC---CCCCcceEEEeC-CCCCceEEEeeeC-CEEEE
Q psy16020          7 TPYPLNKIL-DTALPPVH-VQG--RVVCALADGSVAIFRRGPDGQ---WDLSKYHTVTLG-LPHHSVRSLAAVY-NKVWC   77 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~-~~~--~v~vgl~nG~l~v~~~~~~~~---wd~~~~~~i~l~-~~~~pV~~m~~v~-~~Lw~   77 (151)
                      =|+..|+-+ |.|.||.| .++  .+-.|+-|+.|.+|+.+.+..   -.++....-.++ +++.||.+++... +.+.+
T Consensus       108 ~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~iv  187 (735)
T KOG0308|consen  108 FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIV  187 (735)
T ss_pred             hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEE
Confidence            466667644 89999999 433  344556689999999975421   011111222344 5679999999986 45555


Q ss_pred             EeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         78 GYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        78 g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +.|  +-+.+||++|.+-.-.+.+|++   -|.++....+|- .+|++.|++|||||....++++++
T Consensus       188 sGgtek~lr~wDprt~~kimkLrGHTd---NVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~  251 (735)
T KOG0308|consen  188 SGGTEKDLRLWDPRTCKKIMKLRGHTD---NVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATY  251 (735)
T ss_pred             ecCcccceEEeccccccceeeeecccc---ceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeE
Confidence            544  5699999999998888889998   899999997775 889999999999999988888876

>KOG0291|consensus

Probab=98.91  E-value=3.2e-08  Score=86.61  Aligned_cols=129  Identities=20%  Similarity=0.349  Sum_probs=93.9

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCC-------------------------------CC---CCCCCcceEEEeC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGP-------------------------------DG---QWDLSKYHTVTLG   59 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~-------------------------------~~---~wd~~~~~~i~l~   59 (151)
                      +.+.|+.|.++  .+-+|..||.|.||+-.+                               ||   .||+..+..+.-.
T Consensus       351 ~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTf  430 (893)
T KOG0291|consen  351 DRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTF  430 (893)
T ss_pred             cceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeee
Confidence            46778888766  677788888888886653                               33   4788777776655


Q ss_pred             CCCCceE--EEeee--CCEEEEEeCC--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeC
Q psy16020         60 LPHHSVR--SLAAV--YNKVWCGYKN--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNA  132 (151)
Q Consensus        60 ~~~~pV~--~m~~v--~~~Lw~g~~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~  132 (151)
                      ..+.|+.  |++.-  ++-+.+|..+  .|+||+.+|||++..+.+|+   .+|.++.+++.+ +++|++-|.+||+||.
T Consensus       431 t~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHE---gPVs~l~f~~~~~~LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  431 TSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHE---GPVSGLSFSPDGSLLASGSWDKTVRIWDI  507 (893)
T ss_pred             cCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCC---CcceeeEEccccCeEEeccccceEEEEEe
Confidence            4446663  44442  3445666655  59999999999999999996   499998887554 4999999999999999


Q ss_pred             Ccc-ceeeeEeCCccc
Q psy16020        133 HTY-QHLQDVDIEPYV  147 (151)
Q Consensus       133 ~t~-~~l~~idi~~~v  147 (151)
                      -.. ....++++.+.+
T Consensus       508 f~s~~~vEtl~i~sdv  523 (893)
T KOG0291|consen  508 FSSSGTVETLEIRSDV  523 (893)
T ss_pred             eccCceeeeEeeccce
Confidence            753 355566555433

>KOG0639|consensus

Probab=98.91  E-value=2.1e-09  Score=90.54  Aligned_cols=110  Identities=18%  Similarity=0.281  Sum_probs=83.8

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE--eCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCCcEEEEEEec
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT--LGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~--l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h  100 (151)
                      +.+++|..-.+|.||+..+       +...|+  +-.+..-+..+++. +.+|..+|  +++|.|||+.+-...++|++|
T Consensus       478 rtLivGGeastlsiWDLAa-------pTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGh  550 (705)
T KOG0639|consen  478 RTLIVGGEASTLSIWDLAA-------PTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  550 (705)
T ss_pred             ceEEeccccceeeeeeccC-------CCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCC
Confidence            3588888877888887752       112333  32222344555555 45676666  689999999999999999999


Q ss_pred             CCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020        101 PRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus       101 ~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +|   .+.|+..+  |..+| +++-|++||.||.++...+++-|++.-
T Consensus       551 tD---GascIdis~dGtklW-TGGlDntvRcWDlregrqlqqhdF~SQ  594 (705)
T KOG0639|consen  551 TD---GASCIDISKDGTKLW-TGGLDNTVRCWDLREGRQLQQHDFSSQ  594 (705)
T ss_pred             CC---CceeEEecCCCceee-cCCCccceeehhhhhhhhhhhhhhhhh
Confidence            98   78888888  66778 999999999999999999999887653

>KOG0646|consensus

Probab=98.89  E-value=4.1e-08  Score=81.74  Aligned_cols=129  Identities=16%  Similarity=0.161  Sum_probs=96.6

Q ss_pred             CCceeeeeeCC-CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEE
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~   77 (151)
                      +++.++...=+ -+|++|.-..+    +||.+..|-++.+|+...+.       -.+++.. ..+++||++-  +..+|+
T Consensus       163 ~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~-------LLlti~f-p~si~av~lDpae~~~yi  234 (476)
T KOG0646|consen  163 SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV-------LLLTITF-PSSIKAVALDPAERVVYI  234 (476)
T ss_pred             CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce-------eeEEEec-CCcceeEEEcccccEEEe
Confidence            34455555433 48888877544    89999999999999885321       1234433 2899999984  567999


Q ss_pred             EeC-CeEEEEeCCCCc----------------EEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020         78 GYK-NKIHVVDPKSLV----------------VLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        78 g~~-n~I~vid~~t~~----------------i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      |.. ++|++++.....                -.+.|.+|++ ++.|+|++++-+| +++|++.|+.+++||..+.+++.
T Consensus       235 Gt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~-~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iR  313 (476)
T KOG0646|consen  235 GTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHEN-ESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIR  313 (476)
T ss_pred             cCCcceEEeeehhcCCcccccccccccccccceeeeeccccC-CcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHH
Confidence            995 799999876554                2234667865 4799999999665 49999999999999999999888


Q ss_pred             eEe
Q psy16020        140 DVD  142 (151)
Q Consensus       140 ~id  142 (151)
                      .+-
T Consensus       314 tl~  316 (476)
T KOG0646|consen  314 TLQ  316 (476)
T ss_pred             HHh
Confidence            774

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.89  E-value=1.8e-07  Score=83.87  Aligned_cols=123  Identities=12%  Similarity=0.158  Sum_probs=92.8

Q ss_pred             CCceeeeEEeC--CeEEEEecCCcEEEEEcCC---CCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEe-CCeEEE
Q psy16020         15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGP---DGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGY-KNKIHV   85 (151)
Q Consensus        15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~---~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~-~n~I~v   85 (151)
                      ...|.++.+.+  +.+.+|..||+|.+|+...   ++. +...+ ...+.. ..+|.++...   ++.|..|+ ++.|.+
T Consensus       483 ~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~-~~~~~-~~~~~~-~~~v~~l~~~~~~~~~las~~~Dg~v~l  559 (793)
T PLN00181        483 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR-DIHYP-VVELAS-RSKLSGICWNSYIKSQVASSNFEGVVQV  559 (793)
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccc-ccccc-eEEecc-cCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence            35799998864  4688899999999998642   110 11111 223332 3788888875   35677666 579999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      ||.++++....+.+|+.   .|.++.+.+  ..+++|++.|+.|++||.++.+.+..+..
T Consensus       560 Wd~~~~~~~~~~~~H~~---~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~  616 (793)
T PLN00181        560 WDVARSQLVTEMKEHEK---RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT  616 (793)
T ss_pred             EECCCCeEEEEecCCCC---CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence            99999999999999975   899999974  35689999999999999999888877753

>KOG0263|consensus

Probab=98.89  E-value=1.2e-08  Score=88.88  Aligned_cols=108  Identities=15%  Similarity=0.160  Sum_probs=86.8

Q ss_pred             CceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeCCEEEEEeC---CeEEEEeCC
Q psy16020         16 DTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYK---NKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~~~Lw~g~~---n~I~vid~~   89 (151)
                      +-|.|..|++|.  ++.|.+|-++.+|+...+        ..+.+. .++.||.++++...-.|.|+|   +.|.+||..
T Consensus       536 sDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G--------~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~  607 (707)
T KOG0263|consen  536 SDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG--------NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA  607 (707)
T ss_pred             cccceEEECCcccccccCCCCceEEEEEcCCC--------cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC
Confidence            468889998874  666667778888876533        234432 367999999998766666664   689999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCc
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t  134 (151)
                      +++...++.+|++   .|..|.++.+ +|+++++.|+.|++||...
T Consensus       608 ~~~~v~~l~~Ht~---ti~SlsFS~dg~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  608 NGSLVKQLKGHTG---TIYSLSFSRDGNVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             CCcchhhhhcccC---ceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence            9999999999975   9999999955 5599999999999999986

>KOG0647|consensus

Probab=98.87  E-value=4.5e-08  Score=78.13  Aligned_cols=123  Identities=19%  Similarity=0.223  Sum_probs=94.5

Q ss_pred             CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCC
Q psy16020         16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~   89 (151)
                      |+|-+|.+.+   +.+-+|.=||+|.+|+....|.-   .++...-  ...||-|....+  ++++.|+ ++.+.+||+.
T Consensus        28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~---~~ka~~~--~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~  102 (347)
T KOG0647|consen   28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL---VPKAQQS--HDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA  102 (347)
T ss_pred             cchheeEeccccCceEEecccCCceEEEEEecCCcc---cchhhhc--cCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence            7999999987   33557888999999999865542   2333222  248999999974  6788776 6789999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      |+|+ .++.+|..   +|.++.+.+.   ..+++++-|-+||.||++...++..+++-..+
T Consensus       103 S~Q~-~~v~~Hd~---pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRv  159 (347)
T KOG0647|consen  103 SGQV-SQVAAHDA---PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERV  159 (347)
T ss_pred             CCCe-eeeeeccc---ceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecccee
Confidence            9976 56777965   7777777643   35799999999999999999999988765443

>KOG1036|consensus

Probab=98.86  E-value=7.7e-08  Score=76.74  Aligned_cols=118  Identities=19%  Similarity=0.214  Sum_probs=93.1

Q ss_pred             eeeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCC-eEE
Q psy16020          9 YPLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKN-KIH   84 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n-~I~   84 (151)
                      ...++...|+++-.|.+ ..+|+|..||.|..|+++.+        ....+|.+..||+||...  .+.+-.|+++ +|.
T Consensus        48 ~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~--------~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik  119 (323)
T KOG1036|consen   48 KLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTG--------NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIK  119 (323)
T ss_pred             hhheecCCceeeeeccCCceEEEeccCceEEEEEecCC--------cceeeccCCCceEEEEeeccCCeEEEcccCccEE
Confidence            34556678999999876 57999999999999998632        345778777999999998  6889999965 899


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      +||+..-...-+++    ....|.+|...|+. ++-+..+..+.+||.++.+.-.
T Consensus       120 ~wD~R~~~~~~~~d----~~kkVy~~~v~g~~-LvVg~~~r~v~iyDLRn~~~~~  169 (323)
T KOG1036|consen  120 FWDPRNKVVVGTFD----QGKKVYCMDVSGNR-LVVGTSDRKVLIYDLRNLDEPF  169 (323)
T ss_pred             EEeccccccccccc----cCceEEEEeccCCE-EEEeecCceEEEEEcccccchh
Confidence            99999855554454    33499999998887 5566778899999999865443

>KOG0306|consensus

Probab=98.84  E-value=3.9e-08  Score=86.01  Aligned_cols=116  Identities=21%  Similarity=0.202  Sum_probs=97.6

Q ss_pred             CceeeeEEeCCeE--EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCCC
Q psy16020         16 DTALPPVHVQGRV--VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~~v--~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t   90 (151)
                      ..|+|+..+++.+  -||=+||.|-+|+..++       -..+.+..++..|++|.+-  +.+|.-|+. ..|.|||.-.
T Consensus        66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~-------~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~  138 (888)
T KOG0306|consen   66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESE-------EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVG  138 (888)
T ss_pred             ceEEEeeccCCcceEEEEecCceEEeeccCCC-------ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEecc
Confidence            5899999988865  99999999999987532       2356776678999999995  678888885 5799999988


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      -...-++.+|.+   +|+.+.+.+ +.+.+|++.|+.|++||.+|..+....
T Consensus       139 E~Gl~rL~GHkd---~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Th  187 (888)
T KOG0306|consen  139 EEGLFRLRGHKD---SITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETH  187 (888)
T ss_pred             ceeeEEeecchH---HHhHHhccCCCeEEEEeccCceEEEEecccceeeeEE
Confidence            888899999987   888888886 888999999999999999987766543

>PTZ00421 coronin; Provisional

Probab=98.84  E-value=4.1e-07  Score=77.96  Aligned_cols=125  Identities=14%  Similarity=0.174  Sum_probs=85.3

Q ss_pred             eeeeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-
Q psy16020          8 PYPLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-   80 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-   80 (151)
                      ++..++-+ ..|.++.+++   +.++.|..||+|.+|+...+       .....+..+..+|+++.+.  ++.|..|+. 
T Consensus       117 ~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg-------~~~~~l~~h~~~V~sla~spdG~lLatgs~D  189 (493)
T PTZ00421        117 PIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG-------KAVEVIKCHSDQITSLEWNLDGSLLCTTSKD  189 (493)
T ss_pred             ceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC-------eEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence            34444433 6899999975   36888899999999987531       1122344445899999997  356777775 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEE----cCCCeEEEEeCCccc-eeeeE
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSI----RLDSTLRMYNAHTYQ-HLQDV  141 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~----~~d~~l~lwd~~t~~-~l~~i  141 (151)
                      ++|++||+++++...++.+|...  .+....+. ..+..++.    +.|+.|++||.++.+ ++..+
T Consensus       190 g~IrIwD~rsg~~v~tl~~H~~~--~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~  254 (493)
T PTZ00421        190 KKLNIIDPRDGTIVSSVEAHASA--KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTV  254 (493)
T ss_pred             CEEEEEECCCCcEEEEEecCCCC--cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEe
Confidence            58999999999999999999642  22233333 23344444    357899999998754 44433

>KOG0281|consensus

Probab=98.83  E-value=1.5e-08  Score=82.45  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=95.8

Q ss_pred             eeeeeeCC----CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-Ce
Q psy16020          8 PYPLNKIL----DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NK   82 (151)
Q Consensus         8 ~l~~i~l~----~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~   82 (151)
                      .+..|.-|    +.|+|+.|.++.+..|+-|.+|.||+++.     +  ...-.|..+..+|-|+.+-+.-+--|+. .+
T Consensus       186 ~~~rinc~Se~skgVYClQYDD~kiVSGlrDnTikiWD~n~-----~--~c~~~L~GHtGSVLCLqyd~rviisGSSDsT  258 (499)
T KOG0281|consen  186 LLQRINCRSENSKGVYCLQYDDEKIVSGLRDNTIKIWDKNS-----L--ECLKILTGHTGSVLCLQYDERVIVSGSSDST  258 (499)
T ss_pred             eeeeecCCcccCCceEEEEecchhhhcccccCceEEecccc-----H--HHHHhhhcCCCcEEeeeccceEEEecCCCce
Confidence            35556555    59999999999999999999999999862     1  1222444556999999998876777774 58


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~  135 (151)
                      |.|||.+|++..+++-.|.+   .|-++.++ +|.-+++++|.++.+||..+-
T Consensus       259 vrvWDv~tge~l~tlihHce---aVLhlrf~-ng~mvtcSkDrsiaVWdm~sp  307 (499)
T KOG0281|consen  259 VRVWDVNTGEPLNTLIHHCE---AVLHLRFS-NGYMVTCSKDRSIAVWDMASP  307 (499)
T ss_pred             EEEEeccCCchhhHHhhhcc---eeEEEEEe-CCEEEEecCCceeEEEeccCc
Confidence            99999999999999999987   89999886 666889999999999998753

>KOG0310|consensus

Probab=98.82  E-value=1.2e-07  Score=79.29  Aligned_cols=124  Identities=20%  Similarity=0.180  Sum_probs=95.3

Q ss_pred             CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-EEEEEe-CCeEEEEeCCC
Q psy16020         16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-KVWCGY-KNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-~Lw~g~-~n~I~vid~~t   90 (151)
                      |.|-|+...+.   -|+.|.=||.|..|+....+      ....++. +..||-.+++..+ .+.+.+ ||.|.|||..+
T Consensus       154 DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~------~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~  226 (487)
T KOG0310|consen  154 DYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT------SRVVELN-HGCPVESVLALPSGSLIASAGGNSVKVWDLTT  226 (487)
T ss_pred             ceeEeeccccCCCeEEEecCCCceEEEEEeccCC------ceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEEEEEecC
Confidence            67878777654   58889999999999876432      3455664 3599999999864 555555 68999999985


Q ss_pred             -CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020         91 -LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK  149 (151)
Q Consensus        91 -~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~  149 (151)
                       ++....+.-|.   ..|+||.+.+++- ++|++-|+.+++||+.+++.........++-.
T Consensus       227 G~qll~~~~~H~---KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLs  284 (487)
T KOG0310|consen  227 GGQLLTSMFNHN---KTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLS  284 (487)
T ss_pred             Cceehhhhhccc---ceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceee
Confidence             55555555475   4899999997655 89999999999999999998888777766543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.82  E-value=3.4e-07  Score=82.12  Aligned_cols=120  Identities=14%  Similarity=0.124  Sum_probs=90.2

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVW   76 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw   76 (151)
                      .+.+.+..++-+ +.|.++.+++   +.+++|..||+|.+|+....     .....+.  . ..+|.|+.+.   +..|.
T Consensus       563 ~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~-----~~~~~~~--~-~~~v~~v~~~~~~g~~la  634 (793)
T PLN00181        563 ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG-----VSIGTIK--T-KANICCVQFPSESGRSLA  634 (793)
T ss_pred             CCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC-----cEEEEEe--c-CCCeEEEEEeCCCCCEEE
Confidence            345566666544 7899999963   46888999999999997532     1222232  2 2678888874   35688


Q ss_pred             EEeC-CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020         77 CGYK-NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        77 ~g~~-n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t  134 (151)
                      +|+. +.|++||.++.+ ...++.+|..   .|.++.+.....+++++.|++|++||.++
T Consensus       635 tgs~dg~I~iwD~~~~~~~~~~~~~h~~---~V~~v~f~~~~~lvs~s~D~~ikiWd~~~  691 (793)
T PLN00181        635 FGSADHKVYYYDLRNPKLPLCTMIGHSK---TVSYVRFVDSSTLVSSSTDNTLKLWDLSM  691 (793)
T ss_pred             EEeCCCeEEEEECCCCCccceEecCCCC---CEEEEEEeCCCEEEEEECCCEEEEEeCCC
Confidence            8875 689999998876 4677888875   89999988777789999999999999974

>KOG0278|consensus

Probab=98.82  E-value=9.5e-08  Score=74.92  Aligned_cols=124  Identities=17%  Similarity=0.149  Sum_probs=87.1

Q ss_pred             CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC--
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK--   80 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~--   80 (151)
                      .+.+.++++.++.+|.++.++..-=|+-.++|.=..|       ||......++-..-+..|.+-.+.. ..++++-|  
T Consensus       173 rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~F-------wdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged  245 (334)
T KOG0278|consen  173 RTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKF-------WDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGED  245 (334)
T ss_pred             ccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEE-------eccccccceeeccCccccccccccCCCceEEecCcc
Confidence            4667889999999999998876544555556653333       3333444444433225566656654 34555444  


Q ss_pred             CeEEEEeCCCCcEEEEE-EecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce
Q psy16020         81 NKIHVVDPKSLVVLKSF-DAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~-~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~  137 (151)
                      ..+|.||-.|+.-.-.+ .+|.   .+|+|+.++++|- +.|+++|++||||.+.-.+.
T Consensus       246 ~~~~kfDy~TgeEi~~~nkgh~---gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  246 FKVYKFDYNTGEEIGSYNKGHF---GPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             eEEEEEeccCCceeeecccCCC---CceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence            37999999999876665 6775   4999999998876 89999999999999875443

>KOG0272|consensus

Probab=98.80  E-value=7.8e-08  Score=79.45  Aligned_cols=123  Identities=16%  Similarity=0.187  Sum_probs=100.6

Q ss_pred             CceeeeEEeCC----eEEEEecCCcEEEEEcCC---------------------CC-------------CCCCCcceEE-
Q psy16020         16 DTALPPVHVQG----RVVCALADGSVAIFRRGP---------------------DG-------------QWDLSKYHTV-   56 (151)
Q Consensus        16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~---------------------~~-------------~wd~~~~~~i-   56 (151)
                      +.|.++.+++.    .+-.|.+||++.+|....                     +|             -||++....+ 
T Consensus       218 ~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL  297 (459)
T KOG0272|consen  218 SRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELL  297 (459)
T ss_pred             cceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhH
Confidence            68888888765    688999999999998763                     11             3677655433 


Q ss_pred             EeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC
Q psy16020         57 TLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA  132 (151)
Q Consensus        57 ~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~  132 (151)
                      ....+..+|.++++. ++.|.+.+|  +.=.|||+.||..+-.|++|..   +|..|.++++|- .++++.|+++++||.
T Consensus       298 ~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k---~I~~V~fsPNGy~lATgs~Dnt~kVWDL  374 (459)
T KOG0272|consen  298 LQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK---EILSVAFSPNGYHLATGSSDNTCKVWDL  374 (459)
T ss_pred             hhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEeccccc---ceeeEeECCCceEEeecCCCCcEEEeee
Confidence            223345999999997 577888776  4678999999999999999986   999999999988 899999999999999


Q ss_pred             CccceeeeE
Q psy16020        133 HTYQHLQDV  141 (151)
Q Consensus       133 ~t~~~l~~i  141 (151)
                      +.-+.+..|
T Consensus       375 R~r~~ly~i  383 (459)
T KOG0272|consen  375 RMRSELYTI  383 (459)
T ss_pred             cccccceec
Confidence            988887777

>KOG0265|consensus

Probab=98.78  E-value=1.1e-07  Score=75.91  Aligned_cols=117  Identities=11%  Similarity=0.129  Sum_probs=85.6

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCCC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t   90 (151)
                      ..|+.+.++++  .+..|..|-.|..|+..  |  |.++...++.  +...|.-+...  ++.|..+. +.+|++||++|
T Consensus        48 geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~--g--dceN~~~lkg--HsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~t  121 (338)
T KOG0265|consen   48 GEIYTIKFHPDGSCFASGGSDRAIVLWNVY--G--DCENFWVLKG--HSGAVMELHGMRDGSHILSCGTDKTVRGWDAET  121 (338)
T ss_pred             ceEEEEEECCCCCeEeecCCcceEEEEecc--c--cccceeeecc--ccceeEeeeeccCCCEEEEecCCceEEEEeccc
Confidence            57888888764  35556666678777643  2  3344444453  34788877776  35565444 56899999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++..+.+.+|++   -|+.|...  |.....|++.|+++||||.++.+.++.+
T Consensus       122 G~~~rk~k~h~~---~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~  171 (338)
T KOG0265|consen  122 GKRIRKHKGHTS---FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF  171 (338)
T ss_pred             ceeeehhccccc---eeeecCccccCCeEEEecCCCceEEEEeecccchhhcc
Confidence            999999999986   67777655  4455899999999999999977777766

>KOG1036|consensus

Probab=98.78  E-value=1.7e-07  Score=74.78  Aligned_cols=119  Identities=13%  Similarity=0.139  Sum_probs=92.3

Q ss_pred             CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCeEEEEeCCCC
Q psy16020         16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNKIHVVDPKSL   91 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~I~vid~~t~   91 (151)
                      |.|.++.|.  .+.+.|++=||+|.+|+....     +.  ..++ .++.|+.+.++.+ .++|.|+ +++|..+|..++
T Consensus        14 d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~-----~l--~~~~-~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~   85 (323)
T KOG1036|consen   14 DGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN-----SL--KLKF-KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTG   85 (323)
T ss_pred             hceeeEEEcCcCCcEEEEeccCcEEEEeccch-----hh--hhhe-ecCCceeeeeccCCceEEEeccCceEEEEEecCC
Confidence            789999987  457999999999999997632     11  1122 2359999999986 6799998 789999999988


Q ss_pred             cEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +..+ +..|..   .|.||... +.+..||++-|.+|++||++.......+|....
T Consensus        86 ~~~~-igth~~---~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kk  137 (323)
T KOG1036|consen   86 NEDQ-IGTHDE---GIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKK  137 (323)
T ss_pred             ccee-eccCCC---ceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCce
Confidence            7643 444754   89999998 567799999999999999997666666654443

>PTZ00420 coronin; Provisional

Probab=98.78  E-value=9e-07  Score=77.01  Aligned_cols=120  Identities=14%  Similarity=0.178  Sum_probs=80.5

Q ss_pred             CceeeeEEeCC--eE-EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCC
Q psy16020         16 DTALPPVHVQG--RV-VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~--~v-~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~   89 (151)
                      ..|.++.+++.  .+ ..|..||+|.+|+...+     .  ....+.. ..+|.++.+.  ++.|.++| +++|++||++
T Consensus       126 ~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg-----~--~~~~i~~-~~~V~SlswspdG~lLat~s~D~~IrIwD~R  197 (568)
T PTZ00420        126 KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENE-----K--RAFQINM-PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR  197 (568)
T ss_pred             CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCC-----c--EEEEEec-CCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence            68999999863  34 45678999999987532     1  1223322 3789999986  35566677 4689999999


Q ss_pred             CCcEEEEEEecCCCCCc--eeEEEEeCC-EEEEEEcCC----CeEEEEeCCc-cceeeeEeC
Q psy16020         90 SLVVLKSFDAHPRRESQ--VRQMTWAGD-GVWVSIRLD----STLRMYNAHT-YQHLQDVDI  143 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~--I~~m~~~~~-~vwis~~~d----~~l~lwd~~t-~~~l~~idi  143 (151)
                      ++++..++.+|......  +....++++ +.++|++.|    ..|+|||.++ .+++..+.+
T Consensus       198 sg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~l  259 (568)
T PTZ00420        198 KQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSI  259 (568)
T ss_pred             CCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEe
Confidence            99999999999752111  111112233 456776655    4799999995 667766544

>KOG0301|consensus

Probab=98.77  E-value=5.3e-08  Score=84.40  Aligned_cols=114  Identities=23%  Similarity=0.346  Sum_probs=89.1

Q ss_pred             eEEeC---CeEEEEecCCcEEEEEcCC--------------------------CCCCCCCcceEEE-------eCCCCCc
Q psy16020         21 PVHVQ---GRVVCALADGSVAIFRRGP--------------------------DGQWDLSKYHTVT-------LGLPHHS   64 (151)
Q Consensus        21 i~~~~---~~v~vgl~nG~l~v~~~~~--------------------------~~~wd~~~~~~i~-------l~~~~~p   64 (151)
                      ++|.+   +++++|+-|+.+++|.+..                          .|+||.. .+...       +-.++.+
T Consensus        64 i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~T-akvW~~~~l~~~l~gH~as  142 (745)
T KOG0301|consen   64 ICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDST-AKVWRIGELVYSLQGHTAS  142 (745)
T ss_pred             ceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccc-eEEecchhhhcccCCcchh
Confidence            56654   6799999999999998862                          3578743 22222       2335689


Q ss_pred             eEEEeeeC-CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         65 VRSLAAVY-NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        65 V~~m~~v~-~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |-+++..+ +++-.||++ .|++|+.  ++.+++|.+|+|   .|+.++..+++=++|+++|+.||+|+. +++.+.+.
T Consensus       143 VWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD---~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~  215 (745)
T KOG0301|consen  143 VWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTD---CVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEM  215 (745)
T ss_pred             eeeeeecCCCcEEeccCcceeeeccC--Cchhhhhccchh---heeeeEEecCCCeEeecCCceEEEEec-cCceeeee
Confidence            98888764 667788876 6999965  889999999998   999999998866999999999999999 57776654

>KOG0273|consensus

Probab=98.76  E-value=2.2e-07  Score=77.73  Aligned_cols=124  Identities=16%  Similarity=0.203  Sum_probs=93.2

Q ss_pred             CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCC-CCC--cceEEEeCC-CCCceEEEeeeCC-EEEEEeCCeEEEEe
Q psy16020         15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQW-DLS--KYHTVTLGL-PHHSVRSLAAVYN-KVWCGYKNKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~w-d~~--~~~~i~l~~-~~~pV~~m~~v~~-~Lw~g~~n~I~vid   87 (151)
                      ..+|.+|+|.  ..-+..+..||+|.+|++..++.- ++.  ......+.- |..|++.-...+. .+|++.++.|.+||
T Consensus       359 ~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd  438 (524)
T KOG0273|consen  359 HGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD  438 (524)
T ss_pred             cCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence            3689999998  445667777899999998754421 221  112223321 2355544333343 48888899999999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++.++...+|..|+.   +|..++++++|- ..|++.|+.|.+|+++++++.++.
T Consensus       439 v~~gv~i~~f~kH~~---pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~  490 (524)
T KOG0273|consen  439 VESGVPIHTLMKHQE---PVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSY  490 (524)
T ss_pred             ccCCceeEeeccCCC---ceEEEEecCCCcEEEecCCCCeeEeccccchheeEee
Confidence            999999999999986   999999998877 789999999999999999988875

>KOG0318|consensus

Probab=98.74  E-value=3e-07  Score=77.92  Aligned_cols=114  Identities=17%  Similarity=0.274  Sum_probs=92.8

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE--eCCCCCceEEEeeeC-CEEEE--EeCCeEEEEeCCCCcEEEEEE-
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT--LGLPHHSVRSLAAVY-NKVWC--GYKNKIHVVDPKSLVVLKSFD-   98 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~--l~~~~~pV~~m~~v~-~~Lw~--g~~n~I~vid~~t~~i~~~~~-   98 (151)
                      +-|+..|..|+++++|+=         +|..++  .+.+..=|+|+-+.. +..++  |++++|+++|-+|++....|+ 
T Consensus       160 PfRi~T~sdDn~v~ffeG---------PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~  230 (603)
T KOG0318|consen  160 PFRIATGSDDNTVAFFEG---------PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED  230 (603)
T ss_pred             ceEEEeccCCCeEEEeeC---------CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC
Confidence            336888888999999972         444444  445557899999974 55554  446899999999999999999 


Q ss_pred             --ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccccc
Q psy16020         99 --AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM  150 (151)
Q Consensus        99 --~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~  150 (151)
                        +|.   ..|..+.+++++- +++.+-|-++|+||+.+.++.+++.+...+.+|
T Consensus       231 ~~aHk---GsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dq  282 (603)
T KOG0318|consen  231 SDAHK---GSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQ  282 (603)
T ss_pred             CCCcc---ccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhce
Confidence              776   4899999997766 899999999999999999999999888776655

>KOG2110|consensus

Probab=98.73  E-value=7.2e-07  Score=72.76  Aligned_cols=124  Identities=17%  Similarity=0.278  Sum_probs=92.8

Q ss_pred             eeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC-CceEEEeeeCCEEEEEe---C--Ce
Q psy16020          9 YPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH-HSVRSLAAVYNKVWCGY---K--NK   82 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-~pV~~m~~v~~~Lw~g~---~--n~   82 (151)
                      +=.+..|.+|++.....+|+.|-| .++|.||+.+     |....+.|..-.++ .-+-.+.+..+.=|.++   .  +.
T Consensus        81 ICe~~fpt~IL~VrmNr~RLvV~L-ee~IyIydI~-----~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~Gd  154 (391)
T KOG2110|consen   81 ICEIFFPTSILAVRMNRKRLVVCL-EESIYIYDIK-----DMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGD  154 (391)
T ss_pred             EEEEecCCceEEEEEccceEEEEE-cccEEEEecc-----cceeehhhhccCCCccceEeeccCCCCceEEecCCCCCce
Confidence            345667889999999999999999 5569999886     34444444443221 33445555544334444   2  58


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcC-CCeEEEEeCCccceeeeE
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRL-DSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~-d~~l~lwd~~t~~~l~~i  141 (151)
                      |++||+.+++....+++|..   .+.+|+++.+|- ..+.++ ...||+|++.+++.+.++
T Consensus       155 V~l~d~~nl~~v~~I~aH~~---~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eF  212 (391)
T KOG2110|consen  155 VVLFDTINLQPVNTINAHKG---PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEF  212 (391)
T ss_pred             EEEEEcccceeeeEEEecCC---ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeee
Confidence            99999999999999999974   999999998887 555555 456999999999999987

>KOG0315|consensus

Probab=98.72  E-value=5.3e-07  Score=70.62  Aligned_cols=121  Identities=12%  Similarity=0.125  Sum_probs=91.5

Q ss_pred             CceeeeeeCCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-C
Q psy16020          6 PTPYPLNKILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-K   80 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~   80 (151)
                      +.|=+..+.+++|.+++-++|+  +++|-.+|.|.||+..++-.    ...  .+.+...||+++.+..  ..|-++. .
T Consensus       115 ~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c----~~~--liPe~~~~i~sl~v~~dgsml~a~nnk  188 (311)
T KOG0315|consen  115 LSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSC----THE--LIPEDDTSIQSLTVMPDGSMLAAANNK  188 (311)
T ss_pred             cccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcc----ccc--cCCCCCcceeeEEEcCCCcEEEEecCC
Confidence            5566667788999999998875  99999999999999874321    112  2233348999999973  4465555 4


Q ss_pred             CeEEEEeCCCCc------EEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc
Q psy16020         81 NKIHVVDPKSLV------VLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        81 n~I~vid~~t~~------i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~  135 (151)
                      ++-|||+.-+.+      .+..|.+|+.   .|..-.+++++- +++++.|-++++|.++++
T Consensus       189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~---~il~C~lSPd~k~lat~ssdktv~iwn~~~~  247 (311)
T KOG0315|consen  189 GNCYVWRLLNHQTASELEPVHKFQAHNG---HILRCLLSPDVKYLATCSSDKTVKIWNTDDF  247 (311)
T ss_pred             ccEEEEEccCCCccccceEhhheecccc---eEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence            789999987644      4556788874   777777777766 889999999999999987

>KOG0276|consensus

Probab=98.72  E-value=1.7e-07  Score=80.82  Aligned_cols=132  Identities=15%  Similarity=0.138  Sum_probs=106.5

Q ss_pred             CCCCCceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEE
Q psy16020          2 EYPHPTPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKV   75 (151)
Q Consensus         2 ~~~~~~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~L   75 (151)
                      ||-+.+.+++..- +|-|-||.-++.  ++..+..|=+|..|+|.  +.|....    ..-.+.+=|.++++..   ++.
T Consensus        83 nynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we--~~wa~~q----tfeGH~HyVMqv~fnPkD~ntF  156 (794)
T KOG0276|consen   83 NYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE--NEWACEQ----TFEGHEHYVMQVAFNPKDPNTF  156 (794)
T ss_pred             ecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeecc--Cceeeee----EEcCcceEEEEEEecCCCccce
Confidence            6778888899874 489999998876  57788878899999986  5564321    3334457888888873   445


Q ss_pred             EEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         76 WCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        76 w~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .-+| +.+|+||+..+-....++++|+.   .|+|+.+.+.|   -+||+++|.++++||-+|.+++|+++
T Consensus       157 aS~sLDrTVKVWslgs~~~nfTl~gHek---GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe  224 (794)
T KOG0276|consen  157 ASASLDRTVKVWSLGSPHPNFTLEGHEK---GVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE  224 (794)
T ss_pred             eeeeccccEEEEEcCCCCCceeeecccc---CcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh
Confidence            5455 67899999999999999999975   89999999776   69999999999999999999988873

>KOG0286|consensus

Probab=98.71  E-value=6.8e-07  Score=71.24  Aligned_cols=116  Identities=21%  Similarity=0.202  Sum_probs=93.2

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCC
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t   90 (151)
                      ..|+++....  +++..|..||.|.||+-     |.....+.|++..  .=|...++..  +.+.||- +|+-.|++..+
T Consensus        56 ~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs-----~TtnK~haipl~s--~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~  128 (343)
T KOG0286|consen   56 NKIYAMDWSTDSRRIVSASQDGKLIVWDS-----FTTNKVHAIPLPS--SWVMTCAYSPSGNFVACGGLDNKCSIYPLST  128 (343)
T ss_pred             cceeeeEecCCcCeEEeeccCCeEEEEEc-----ccccceeEEecCc--eeEEEEEECCCCCeEEecCcCceeEEEeccc
Confidence            5788887754  47999999999999985     3445567788876  7777777765  4455554 47777777775


Q ss_pred             C------cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         91 L------VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        91 ~------~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      -      ++.+.+.+|+.   ++.|-.+..++-.++.+.|.+.-+||.++++.++.+
T Consensus       129 ~d~~g~~~v~r~l~gHtg---ylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f  182 (343)
T KOG0286|consen  129 RDAEGNVRVSRELAGHTG---YLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVF  182 (343)
T ss_pred             ccccccceeeeeecCccc---eeEEEEEcCCCceEecCCCceEEEEEcccceEEEEe
Confidence            5      57888999985   999999999999999999999999999999999876

>KOG0296|consensus

Probab=98.71  E-value=1.5e-07  Score=76.61  Aligned_cols=95  Identities=14%  Similarity=0.223  Sum_probs=75.7

Q ss_pred             EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCC
Q psy16020         28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRES  105 (151)
Q Consensus        28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~  105 (151)
                      .-+|+.||+|++|+..+   |.   ++.+..  ++.+|..+...+ ..|+++|. ++|+.||++||+.+.+..+|..   
T Consensus       301 ~A~G~vdG~i~iyD~a~---~~---~R~~c~--he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~---  369 (399)
T KOG0296|consen  301 AACGSVDGTIAIYDLAA---ST---LRHICE--HEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTGHQM---  369 (399)
T ss_pred             hhcccccceEEEEeccc---ch---hheecc--CCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEecCch---
Confidence            44678899999999852   22   222222  236777777766 66999996 5999999999999999999986   


Q ss_pred             ceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020        106 QVRQMTWAGDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus       106 ~I~~m~~~~~~v-wis~~~d~~l~lwd~~  133 (151)
                      .|.++++++++- .++.+.|++.++|+..
T Consensus       370 ~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  370 GILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             heeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            899999997754 8899999999999864

>KOG0279|consensus

Probab=98.71  E-value=5.8e-07  Score=71.16  Aligned_cols=133  Identities=13%  Similarity=0.095  Sum_probs=99.9

Q ss_pred             ceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-C-CCceEEEeeeCC--E-EEEE
Q psy16020          7 TPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-P-HHSVRSLAAVYN--K-VWCG   78 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~-~~pV~~m~~v~~--~-Lw~g   78 (151)
                      ++-+++--+ .-|++..+..+  ++..|.-|-+|..|...        .....++++ . ..=|.|+-++.+  + +-+.
T Consensus        96 ~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~--------g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs  167 (315)
T KOG0279|consen   96 ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL--------GVCKYTIHEDSHREWVSCVRFSPNESNPIIVS  167 (315)
T ss_pred             cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec--------ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEE
Confidence            444444444 56777777543  68888888888887653        223445543 1 367999999864  3 3333


Q ss_pred             e-C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccccc
Q psy16020         79 Y-K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM  150 (151)
Q Consensus        79 ~-~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~~  150 (151)
                      + + ..|+|||.++.++..+|.+|+-   .++.|+++++|- .+|+++|+...|||....++++.++-...|+.+
T Consensus       168 ~s~DktvKvWnl~~~~l~~~~~gh~~---~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl  239 (315)
T KOG0279|consen  168 ASWDKTVKVWNLRNCQLRTTFIGHSG---YVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSL  239 (315)
T ss_pred             ccCCceEEEEccCCcchhhccccccc---cEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeE
Confidence            3 3 4799999999999999999974   999999998887 789999999999999999999998866666543

>KOG1446|consensus

Probab=98.70  E-value=9.8e-07  Score=70.55  Aligned_cols=121  Identities=14%  Similarity=0.178  Sum_probs=92.7

Q ss_pred             CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe---CCeEEEEe
Q psy16020         15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY---KNKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~---~n~I~vid   87 (151)
                      ...|.+|.|.++  .+.++..|-+|.+|+-..+.     ..+  .+..+++-|.+.-+.  .+.+-.++   ++.|+-++
T Consensus        14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~-----~~~--ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen   14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK-----QVK--TINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLS   86 (311)
T ss_pred             CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc-----eee--EeecccccccEEEEecCCceEEEccCCCCCceEEEE
Confidence            468999999654  67777888899999875321     222  333334556555554  46666666   35899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ..+-+.+|-|.+|.+   .|+.+..+ .+..++|.+.|.+|||||.++.++..-++..+
T Consensus        87 l~dNkylRYF~GH~~---~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~  142 (311)
T KOG1446|consen   87 LHDNKYLRYFPGHKK---RVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG  142 (311)
T ss_pred             eecCceEEEcCCCCc---eEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC
Confidence            999999999999986   99999998 44669999999999999999888887776654

>KOG0286|consensus

Probab=98.69  E-value=1.3e-06  Score=69.61  Aligned_cols=133  Identities=14%  Similarity=0.130  Sum_probs=103.6

Q ss_pred             CCceeeeeeCCC-ceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020          5 HPTPYPLNKILD-TALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK   80 (151)
Q Consensus         5 ~~~~l~~i~l~~-~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~   80 (151)
                      ++...+.|+||+ =|..-.|.+  +.|-+|.-|..-.||+...... +-..+..-.|..+..=+.|..+.+ ++|-.|+|
T Consensus        86 TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~-~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SG  164 (343)
T KOG0286|consen   86 TTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDA-EGNVRVSRELAGHTGYLSCCRFLDDNHILTGSG  164 (343)
T ss_pred             cccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccc-cccceeeeeecCccceeEEEEEcCCCceEecCC
Confidence            456688999994 677777754  5677888899999998862100 101222334655567788988885 67999998


Q ss_pred             C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         81 N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        81 n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      + +.-.||.++++..+.|.+|+-   -|-++..++ ++ -++|++-|..-+|||.+...+.|.+
T Consensus       165 D~TCalWDie~g~~~~~f~GH~g---DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF  225 (343)
T KOG0286|consen  165 DMTCALWDIETGQQTQVFHGHTG---DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTF  225 (343)
T ss_pred             CceEEEEEcccceEEEEecCCcc---cEEEEecCCCCCCeEEecccccceeeeeccCcceeEee
Confidence            7 799999999999999999974   688888887 43 3999999999999999999999987

>KOG0279|consensus

Probab=98.68  E-value=4.8e-07  Score=71.62  Aligned_cols=119  Identities=11%  Similarity=0.168  Sum_probs=93.1

Q ss_pred             CCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEe
Q psy16020         15 LDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid   87 (151)
                      .+=|.|+.++++    .+.-+..|++|.+|+..     +++. ..--+| ++.-++.|++. ++.|.+.-|  +.++.||
T Consensus       148 ~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~-----~~~l-~~~~~g-h~~~v~t~~vSpDGslcasGgkdg~~~Lwd  220 (315)
T KOG0279|consen  148 REWVSCVRFSPNESNPIIVSASWDKTVKVWNLR-----NCQL-RTTFIG-HSGYVNTVTVSPDGSLCASGGKDGEAMLWD  220 (315)
T ss_pred             cCcEEEEEEcCCCCCcEEEEccCCceEEEEccC-----Ccch-hhcccc-ccccEEEEEECCCCCEEecCCCCceEEEEE
Confidence            456999999988    36667788999998764     1111 122233 45889999996 456655443  6899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ...++...++++.    ..|+.++++++.-|+....+..|++||.++...+.++.++
T Consensus       221 L~~~k~lysl~a~----~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d  273 (315)
T KOG0279|consen  221 LNEGKNLYSLEAF----DIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLD  273 (315)
T ss_pred             ccCCceeEeccCC----CeEeeEEecCCceeEeeccCCceEEEeccchhhhhhcccc
Confidence            9999999999955    3899999999999999999999999999999998887543

>KOG0271|consensus

Probab=98.68  E-value=3.5e-07  Score=75.17  Aligned_cols=128  Identities=16%  Similarity=0.169  Sum_probs=97.8

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      +-++|-.+|.=+ .+|+|..|.+  .++..|.+|-++.+|+..      .+.|.. .+-.++.=|-|++...  +.|.-|
T Consensus       103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~------TeTp~~-t~KgH~~WVlcvawsPDgk~iASG  175 (480)
T KOG0271|consen  103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLD------TETPLF-TCKGHKNWVLCVAWSPDGKKIASG  175 (480)
T ss_pred             ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccC------CCCcce-eecCCccEEEEEEECCCcchhhcc
Confidence            445666666544 6999999976  478888888899998763      345433 3434468899999974  457777


Q ss_pred             eC-CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEe------CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         79 YK-NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWA------GDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        79 ~~-n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~------~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |. |.|.+||+++++ +-+.|.+|+.   -|+++++-      +...+.|.+.|+.+++||+...+++..+
T Consensus       176 ~~dg~I~lwdpktg~~~g~~l~gH~K---~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l  243 (480)
T KOG0271|consen  176 SKDGSIRLWDPKTGQQIGRALRGHKK---WITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL  243 (480)
T ss_pred             ccCCeEEEecCCCCCcccccccCccc---ceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence            74 689999999988 5677999974   89999886      3356899999999999999988877665

>KOG0643|consensus

Probab=98.68  E-value=1e-06  Score=69.60  Aligned_cols=143  Identities=15%  Similarity=0.184  Sum_probs=106.8

Q ss_pred             CCCCceeeeeeCCCceeeeEEe-CCeEEEEecC------CcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeee--C
Q psy16020          3 YPHPTPYPLNKILDTALPPVHV-QGRVVCALAD------GSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAV--Y   72 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~-~~~v~vgl~n------G~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v--~   72 (151)
                      +++.+++..++.+.+|-..-+. .+.+++...|      +.|.+|+...+. .-+-++| .+++-.+.+.++.+..-  +
T Consensus        81 v~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep-~~kI~t~~skit~a~Wg~l~  159 (327)
T KOG0643|consen   81 VETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEP-YLKIPTPDSKITSALWGPLG  159 (327)
T ss_pred             cCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCc-eEEecCCccceeeeeecccC
Confidence            5788999999999999988775 3345555445      568999876433 2222333 23343334666666653  4


Q ss_pred             CEEEEEe-CCeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020         73 NKVWCGY-KNKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK  149 (151)
Q Consensus        73 ~~Lw~g~-~n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~~  149 (151)
                      +.|.+|- .++|..||++++ +..++-+.|+.   .|+.|..+.+.- +++.+.|.+-+|||.+|++++++.-.+.+|+.
T Consensus       160 ~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~---~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~  236 (327)
T KOG0643|consen  160 ETIIAGHEDGSISIYDARTGKELVDSDEEHSS---KINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNT  236 (327)
T ss_pred             CEEEEecCCCcEEEEEcccCceeeechhhhcc---ccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccc
Confidence            5666555 469999999996 57777888974   999999998866 99999999999999999999999998888874

>KOG0313|consensus

Probab=98.67  E-value=6.3e-07  Score=73.39  Aligned_cols=116  Identities=18%  Similarity=0.257  Sum_probs=90.5

Q ss_pred             CceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCC
Q psy16020         16 DTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSL   91 (151)
Q Consensus        16 ~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~   91 (151)
                      ++|.++.+.+. .+|.+.-|-+|.+|+...++.       .-.+.. +.++.|+.+..  +.|.|||.. .|.+||++++
T Consensus       261 ~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~-------~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~  332 (423)
T KOG0313|consen  261 EPVSSVVWSDATVIYSVSWDHTIKVWDLETGGL-------KSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG  332 (423)
T ss_pred             cceeeEEEcCCCceEeecccceEEEEEeecccc-------eeeeec-CcceeEeecccccceeeecCCCCceeecCCCCC
Confidence            68888887654 588888888898887754332       112322 39999999975  558888865 6999999986


Q ss_pred             c---EEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccc-eeeeEe
Q psy16020         92 V---VLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ-HLQDVD  142 (151)
Q Consensus        92 ~---i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~-~l~~id  142 (151)
                      .   +.++|.+|++   -|..+..++.  ..++|++.|++++|||+++.+ ++.+|.
T Consensus       333 ~gs~v~~s~~gH~n---wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~  386 (423)
T KOG0313|consen  333 DGSVVSQSLIGHKN---WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA  386 (423)
T ss_pred             CCceeEEeeecchh---hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec
Confidence            6   7888999986   7888888744  569999999999999999977 888885

>KOG0294|consensus

Probab=98.67  E-value=4.8e-07  Score=72.71  Aligned_cols=80  Identities=16%  Similarity=0.209  Sum_probs=67.4

Q ss_pred             eEEEeee-CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCcc----
Q psy16020         65 VRSLAAV-YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTY----  135 (151)
Q Consensus        65 V~~m~~v-~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~----  135 (151)
                      +-|+.+. ++.|.+|-+| .|.++|.++..+...|.+|++   .|..|....+   .+++|.+.|+.|++||.+.-    
T Consensus       211 ~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~---RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~  287 (362)
T KOG0294|consen  211 ILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHEN---RVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKR  287 (362)
T ss_pred             ceeeeecCCceEEEecCCceEEEeccCCCccceeeecchh---heeeeEEEecCCceEEEEeccCceEEEEEccccccCC
Confidence            5666665 4789999887 799999999999999999987   8888886533   67999999999999999987    


Q ss_pred             -ceeeeEeCCccc
Q psy16020        136 -QHLQDVDIEPYV  147 (151)
Q Consensus       136 -~~l~~idi~~~v  147 (151)
                       +++.++|+...+
T Consensus       288 ~~~l~e~n~~~Rl  300 (362)
T KOG0294|consen  288 PTLLAELNTNVRL  300 (362)
T ss_pred             cceeEEeecCCcc
Confidence             799999885543

>KOG0284|consensus

Probab=98.66  E-value=4.4e-08  Score=80.71  Aligned_cols=116  Identities=11%  Similarity=0.191  Sum_probs=90.9

Q ss_pred             CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCC
Q psy16020         16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t   90 (151)
                      ++|.++.+.  +..+..|-.+|.|.+|+.+      ....+.++- .+.+.||+|++. ++..+++|  +|.|.|||..-
T Consensus       139 s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn------mnnVk~~~a-hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~  211 (464)
T KOG0284|consen  139 SPVRTMKWSHNGTWMISGDKGGMIKYWQPN------MNNVKIIQA-HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM  211 (464)
T ss_pred             ccceeEEEccCCCEEEEcCCCceEEecccc------hhhhHHhhH-hhhhhhheeccCCCCceeEEecCCCeEEEEeccC
Confidence            588888775  4468888888899998764      222222222 223899999997 45677777  57999999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+-++.+.+|.-   -|.++..-+. +..+|+++|+.|++||++|++++..+
T Consensus       212 ~kee~vL~GHgw---dVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tl  260 (464)
T KOG0284|consen  212 PKEERVLRGHGW---DVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATL  260 (464)
T ss_pred             CchhheeccCCC---CcceeccCCccceeEEccCCceeEeecCCCcchhhhh
Confidence            999999999964   7888888754 77899999999999999999998776

>KOG1273|consensus

Probab=98.66  E-value=6.6e-08  Score=77.77  Aligned_cols=82  Identities=13%  Similarity=0.272  Sum_probs=73.8

Q ss_pred             eEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020         65 VRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        65 V~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      -.|+.+.  ++.|.+||. ++|.|||..|..+-+.|.+|..   +|+++.++.+|- +++.++|..+.+||...+.+++.
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~---pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~r  102 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVR---PITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKR  102 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhcccc---ceeEEEecCCCCEeeeecCCceeEEEeccCCCceeE
Confidence            5677776  688999996 5999999999999999999986   999999997766 89999999999999999999999


Q ss_pred             EeCCccccc
Q psy16020        141 VDIEPYVSK  149 (151)
Q Consensus       141 idi~~~v~~  149 (151)
                      |-+..++-+
T Consensus       103 irf~spv~~  111 (405)
T KOG1273|consen  103 IRFDSPVWG  111 (405)
T ss_pred             EEccCccce
Confidence            999888754

>KOG0319|consensus

Probab=98.66  E-value=3.2e-07  Score=80.08  Aligned_cols=116  Identities=16%  Similarity=0.258  Sum_probs=86.7

Q ss_pred             ceeeeEEeCCeEEEEe--cCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC-CEEE-EEeC-CeEEEEeCCC
Q psy16020         17 TALPPVHVQGRVVCAL--ADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY-NKVW-CGYK-NKIHVVDPKS   90 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl--~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~-~~Lw-~g~~-n~I~vid~~t   90 (151)
                      -|.|..+.+|.-.+|+  .|-+..+        |+++..... .|.++..-|-|+.+.. +++- .+++ .+|++|...+
T Consensus       465 dIN~Vaia~ndkLiAT~SqDktaKi--------W~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~  536 (775)
T KOG0319|consen  465 DINCVAIAPNDKLIATGSQDKTAKI--------WDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST  536 (775)
T ss_pred             cccceEecCCCceEEecccccceee--------ecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc
Confidence            4566666666533333  3334444        555544333 5667789999999975 5544 4445 4799999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      +.+.++|++|+.   .|....+..+|- ++|++.|+.+++|+..|.++++.+|.
T Consensus       537 fSClkT~eGH~~---aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~  587 (775)
T KOG0319|consen  537 FSCLKTFEGHTS---AVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA  587 (775)
T ss_pred             ceeeeeecCccc---eeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh
Confidence            999999999975   787777775554 99999999999999999999999984

>KOG0265|consensus

Probab=98.66  E-value=4.3e-07  Score=72.47  Aligned_cols=126  Identities=17%  Similarity=0.221  Sum_probs=99.1

Q ss_pred             eeeeCC-CceeeeEEe--CCeEEEEecCCcEEEEEcCC--------------------------------CC---CCCCC
Q psy16020         10 PLNKIL-DTALPPVHV--QGRVVCALADGSVAIFRRGP--------------------------------DG---QWDLS   51 (151)
Q Consensus        10 ~~i~l~-~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~--------------------------------~~---~wd~~   51 (151)
                      |.+++. .+|..+.+.  ++.||.+..|-+|++|+-..                                |+   .||..
T Consensus        84 ~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R  163 (338)
T KOG0265|consen   84 WVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR  163 (338)
T ss_pred             eeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence            445665 699999885  45799999999999997652                                12   25555


Q ss_pred             cceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeE
Q psy16020         52 KYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTL  127 (151)
Q Consensus        52 ~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l  127 (151)
                      ....+++...+.++++..+.+  +++..|- +|.|.+||+...+....+.+|.|   .|+.|..+++|- .+|-+-|+++
T Consensus       164 ~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~D---tIt~lsls~~gs~llsnsMd~tv  240 (338)
T KOG0265|consen  164 KKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHAD---TITGLSLSRYGSFLLSNSMDNTV  240 (338)
T ss_pred             ccchhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccC---ceeeEEeccCCCccccccccceE
Confidence            555555554468888888874  7777766 78999999999999999999998   999999998877 7788899999


Q ss_pred             EEEeCCcccee
Q psy16020        128 RMYNAHTYQHL  138 (151)
Q Consensus       128 ~lwd~~t~~~l  138 (151)
                      ++||.+-+-+-
T Consensus       241 rvwd~rp~~p~  251 (338)
T KOG0265|consen  241 RVWDVRPFAPS  251 (338)
T ss_pred             EEEEecccCCC
Confidence            99999965443

>KOG0646|consensus

Probab=98.65  E-value=4.5e-07  Score=75.67  Aligned_cols=126  Identities=10%  Similarity=0.094  Sum_probs=96.8

Q ss_pred             eeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCCceEEEeeeC--CEEEEEe-CCeE
Q psy16020         10 PLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHHSVRSLAAVY--NKVWCGY-KNKI   83 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~pV~~m~~v~--~~Lw~g~-~n~I   83 (151)
                      +.+-+|.+|.||...+  .+|++|+-.|.|.+|+.+.+.        .+. +..+.++|+|+.+.+  ..+..|+ ++.|
T Consensus        76 q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~--------LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V  147 (476)
T KOG0646|consen   76 QYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGI--------LLNVLSAHYQSITCLKFSDDGSHIITGSKDGAV  147 (476)
T ss_pred             hhcccccceeeeecCCCceEEEeecccCcEEEEEecccc--------HHHHHHhhccceeEEEEeCCCcEEEecCCCccE
Confidence            3567899999998864  468888789999999986432        222 233459999999985  3466666 4689


Q ss_pred             EEEeCC---------CCcEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         84 HVVDPK---------SLVVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        84 ~vid~~---------t~~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +||+..         +-+..+.|..|+.   +|+.|.....   +..+|.+.|.++|+||...+.+|.+|-+-..
T Consensus       148 ~vW~l~~lv~a~~~~~~~p~~~f~~Htl---sITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~s  219 (476)
T KOG0646|consen  148 LVWLLTDLVSADNDHSVKPLHIFSDHTL---SITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSS  219 (476)
T ss_pred             EEEEEEeecccccCCCccceeeeccCcc---eeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCc
Confidence            999754         3346778888986   9999999844   4588999999999999999999999864433

>KOG0275|consensus

Probab=98.65  E-value=1.9e-08  Score=81.29  Aligned_cols=120  Identities=18%  Similarity=0.258  Sum_probs=93.9

Q ss_pred             CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeC
Q psy16020         14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~   88 (151)
                      +.++|+||.+..+  .+-.|..||.|.||+...+-+     ...+.- .+..-|+|+.+..  +++--++ +-.+.+--.
T Consensus       262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~C-----lRrFdr-AHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl  335 (508)
T KOG0275|consen  262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQC-----LRRFDR-AHTKGVTCLSFSRDNSQILSASFDQTVRIHGL  335 (508)
T ss_pred             cccceEEEeecccHHHhhccCcCCcEEEEEEecchH-----HHHhhh-hhccCeeEEEEccCcchhhcccccceEEEecc
Confidence            3479999999765  477888899999998753221     011111 1348899999974  4555555 567888889


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++|++++.|.+|+.   .|+...+..+|- .+|++.|+++++||..|.++++++.
T Consensus       336 KSGK~LKEfrGHsS---yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk  387 (508)
T KOG0275|consen  336 KSGKCLKEFRGHSS---YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFK  387 (508)
T ss_pred             ccchhHHHhcCccc---cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhcc
Confidence            99999999999974   899999997776 7899999999999999999998873

>KOG0263|consensus

Probab=98.64  E-value=3.6e-07  Score=79.93  Aligned_cols=115  Identities=13%  Similarity=0.133  Sum_probs=84.1

Q ss_pred             ceeeeEEeCC-eEE-EEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeC-CeEEEEeCCCC
Q psy16020         17 TALPPVHVQG-RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYK-NKIHVVDPKSL   91 (151)
Q Consensus        17 ~V~~i~~~~~-~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~-n~I~vid~~t~   91 (151)
                      ||=+..+.+. +-| .|..|++-++|.-+      ...|..+-.| +.+-|.|..++.|.  +..|+. ..+.+||..+|
T Consensus       495 PVwdV~F~P~GyYFatas~D~tArLWs~d------~~~PlRifag-hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G  567 (707)
T KOG0263|consen  495 PVWDVQFAPRGYYFATASHDQTARLWSTD------HNKPLRIFAG-HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG  567 (707)
T ss_pred             ceeeEEecCCceEEEecCCCceeeeeecc------cCCchhhhcc-cccccceEEECCcccccccCCCCceEEEEEcCCC
Confidence            4444455443 223 33445566666543      2334444444 35889999998755  555553 47999999999


Q ss_pred             cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ...|.|.+|+.   +|.+|++++.|. +.|++.|+.|++||..+++++..+
T Consensus       568 ~~VRiF~GH~~---~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l  615 (707)
T KOG0263|consen  568 NSVRIFTGHKG---PVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQL  615 (707)
T ss_pred             cEEEEecCCCC---ceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhh
Confidence            99999999985   999999999999 688999999999999998776554

>KOG0277|consensus

Probab=98.63  E-value=8.6e-07  Score=69.61  Aligned_cols=126  Identities=17%  Similarity=0.211  Sum_probs=90.4

Q ss_pred             eeeeeeCCCceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CC-EEEEEeC-
Q psy16020          8 PYPLNKILDTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YN-KVWCGYK-   80 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~-~Lw~g~~-   80 (151)
                      ...+....|.++++...   +++|+++.+||+|.+|+....     +.| ......++..|.++...  .+ .+-.+++ 
T Consensus        53 e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~-----s~P-i~~~kEH~~EV~Svdwn~~~r~~~ltsSWD  126 (311)
T KOG0277|consen   53 ECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMP-----SKP-IHKFKEHKREVYSVDWNTVRRRIFLTSSWD  126 (311)
T ss_pred             EEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCC-----Ccc-hhHHHhhhhheEEeccccccceeEEeeccC
Confidence            34445566899999775   568999999999999985421     111 11222345666666664  23 3556664 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++|++||+.-.+-.++|.+|.+   .|...+.++  .+++.|++.|+++++||.+..-.-+.|.
T Consensus       127 ~TiKLW~~~r~~Sv~Tf~gh~~---~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~  187 (311)
T KOG0277|consen  127 GTIKLWDPNRPNSVQTFNGHNS---CIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIE  187 (311)
T ss_pred             CceEeecCCCCcceEeecCCcc---EEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEE
Confidence            6999999999999999999965   788888874  4779999999999999999743333353

>KOG0640|consensus

Probab=98.62  E-value=1e-07  Score=76.71  Aligned_cols=120  Identities=13%  Similarity=0.232  Sum_probs=92.1

Q ss_pred             CCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCC
Q psy16020         15 LDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        15 ~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~   89 (151)
                      -|.|.++.+++..  +.-|.-|++|..|+..+     ....+.+++....+||||+.++  ++.|-+|.+ +.++++|.+
T Consensus       172 ~devn~l~FHPre~ILiS~srD~tvKlFDfsK-----~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~  246 (430)
T KOG0640|consen  172 VDEVNDLDFHPRETILISGSRDNTVKLFDFSK-----TSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVN  246 (430)
T ss_pred             cCcccceeecchhheEEeccCCCeEEEEeccc-----HHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEecc
Confidence            3789999998753  55666689999998852     1222345554334999999997  467999997 589999999


Q ss_pred             CCcEEEEEE---ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         90 SLVVLKSFD---AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        90 t~~i~~~~~---~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |.|+--+-.   .|+   ..|+++.++..|- +++++.|+.|+|||--+.+++..|.
T Consensus       247 T~QcfvsanPd~qht---~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~  300 (430)
T KOG0640|consen  247 TYQCFVSANPDDQHT---GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG  300 (430)
T ss_pred             ceeEeeecCcccccc---cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHH
Confidence            999754432   344   3799999997765 9999999999999999888887774

>KOG0303|consensus

Probab=98.59  E-value=6e-07  Score=73.99  Aligned_cols=121  Identities=19%  Similarity=0.210  Sum_probs=90.9

Q ss_pred             CceeeeEEe--CCeEEEE-ecCCcEEEEEcCCCCC-CCCCcceEEEeCCCCCceEEEeeeC---CE-EEEEeCCeEEEEe
Q psy16020         16 DTALPPVHV--QGRVVCA-LADGSVAIFRRGPDGQ-WDLSKYHTVTLGLPHHSVRSLAAVY---NK-VWCGYKNKIHVVD   87 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vg-l~nG~l~v~~~~~~~~-wd~~~~~~i~l~~~~~pV~~m~~v~---~~-Lw~g~~n~I~vid   87 (151)
                      .+|+++...  +++++++ ..|-+|.||+...+|. -++..| .+.|-.++..|--++.+.   |- +=+||+|.|.+||
T Consensus        82 ~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltep-vv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWn  160 (472)
T KOG0303|consen   82 APVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEP-VVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWN  160 (472)
T ss_pred             ccccccccCccCCceeecCCCCceEEEEECCCcccccCcccc-eEEEeecceeEEEEeecccchhhHhhccCCceEEEEe
Confidence            588888763  3456655 4556899999876553 233333 334444456676666653   44 3467789999999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ..|++..-++. |+|   .|..|.+.-+|- +++..+|-.||+||.++++.+++=
T Consensus       161 v~tgeali~l~-hpd---~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~  211 (472)
T KOG0303|consen  161 VGTGEALITLD-HPD---MVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG  211 (472)
T ss_pred             ccCCceeeecC-CCC---eEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec
Confidence            99999888888 987   999999996655 899999999999999999998875

>KOG0285|consensus

Probab=98.58  E-value=9.9e-07  Score=72.09  Aligned_cols=115  Identities=15%  Similarity=0.110  Sum_probs=85.7

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~   89 (151)
                      ..|-.+...+.  ++|.++.|+.|..|+.        +.-+.|.- ..+=+.|.|+.+..  +.|..|. +..+.|||.+
T Consensus       194 ~~vr~vavS~rHpYlFs~gedk~VKCwDL--------e~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR  265 (460)
T KOG0285|consen  194 ETVRGVAVSKRHPYLFSAGEDKQVKCWDL--------EYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR  265 (460)
T ss_pred             heeeeeeecccCceEEEecCCCeeEEEec--------hhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeec
Confidence            45555555443  7999999998877654        44445543 23348899999984  6676655 4689999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |......+.+|.+   .|..+.+- -++-.++++.|++|||||.+-++-...+
T Consensus       266 tr~~V~~l~GH~~---~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tl  315 (460)
T KOG0285|consen  266 TRASVHVLSGHTN---PVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITL  315 (460)
T ss_pred             ccceEEEecCCCC---cceeEEeecCCCceEEecCCceEEEeeeccCceeEee
Confidence            9999999999987   67776665 2444789999999999999977766554

>KOG0649|consensus

Probab=98.57  E-value=2.9e-06  Score=66.50  Aligned_cols=136  Identities=11%  Similarity=0.041  Sum_probs=97.5

Q ss_pred             CCCceeeeeeCCCce--------eeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcce-EEEeCCCCCceEEEeee-
Q psy16020          4 PHPTPYPLNKILDTA--------LPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAV-   71 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V--------~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~-~i~l~~~~~pV~~m~~v-   71 (151)
                      -+.+.+|+++.|..+        ..|.-  .+|.++.|.+||.+.-++..        .-+ ...+..+..=|.|++.- 
T Consensus        95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE--------~G~i~r~~rGHtDYvH~vv~R~  166 (325)
T KOG0649|consen   95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLE--------DGRIQREYRGHTDYVHSVVGRN  166 (325)
T ss_pred             ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEec--------CCEEEEEEcCCcceeeeeeecc
Confidence            356778888877433        33332  46677777788887777653        222 22444445667888773 


Q ss_pred             -CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCC-------CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         72 -YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR-------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        72 -~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~-------~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       +.++..|.. +.+++||++|.|..+.++...+.       .+-|-+++.  +.-|+-|+..+.+-|||.++-++.+.|.
T Consensus       167 ~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgGp~lslwhLrsse~t~vfp  244 (325)
T KOG0649|consen  167 ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGGPKLSLWHLRSSESTCVFP  244 (325)
T ss_pred             cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCCCceeEEeccCCCceEEEe
Confidence             478888885 79999999999999999976432       122445544  4449999999999999999999999999


Q ss_pred             CCccccc
Q psy16020        143 IEPYVSK  149 (151)
Q Consensus       143 i~~~v~~  149 (151)
                      |..+++.
T Consensus       245 ipa~v~~  251 (325)
T KOG0649|consen  245 IPARVHL  251 (325)
T ss_pred             cccceeE
Confidence            9887753

>KOG0284|consensus

Probab=98.55  E-value=1.9e-07  Score=76.97  Aligned_cols=116  Identities=16%  Similarity=0.187  Sum_probs=87.9

Q ss_pred             CceeeeEEeCC-eEE-EEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCC
Q psy16020         16 DTALPPVHVQG-RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~-~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t   90 (151)
                      .+|.|+.+.++ ..| .+..||+|.||+...       ....-.|..+..-|+|+.-+.  +.|..|+. |-|..||++|
T Consensus       181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~-------~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS  253 (464)
T KOG0284|consen  181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM-------PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS  253 (464)
T ss_pred             hhhheeccCCCCceeEEecCCCeEEEEeccC-------CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence            57888888644 344 455579999987541       111223455568899998875  55777774 6799999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++++.++.+|++   .|..+++.+++- ++++++|..+++||.++-+.++.+
T Consensus       254 g~cl~tlh~HKn---tVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~  302 (464)
T KOG0284|consen  254 GSCLATLHGHKN---TVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTY  302 (464)
T ss_pred             cchhhhhhhccc---eEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHh
Confidence            999999999986   899999997766 689999999999999976655544

>KOG0275|consensus

Probab=98.54  E-value=5.5e-08  Score=78.65  Aligned_cols=129  Identities=18%  Similarity=0.191  Sum_probs=100.5

Q ss_pred             eeeeeCC--CceeeeEEeC--CeEEEEecCCcEEEEEcCCCC-CCCCCcc--eEEEeCCCCCceEEEeeeCC-E-EEEEe
Q psy16020          9 YPLNKIL--DTALPPVHVQ--GRVVCALADGSVAIFRRGPDG-QWDLSKY--HTVTLGLPHHSVRSLAAVYN-K-VWCGY   79 (151)
Q Consensus         9 l~~i~l~--~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~-~wd~~~~--~~i~l~~~~~pV~~m~~v~~-~-Lw~g~   79 (151)
                      -++||..  +-+-|-.+.+  +++..|..||-|-||+.-.+. ..|++.+  ..+-.-+  .+|.||.+..+ + |..|+
T Consensus       205 ~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd--~aVlci~FSRDsEMlAsGs  282 (508)
T KOG0275|consen  205 ARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMD--DAVLCISFSRDSEMLASGS  282 (508)
T ss_pred             hhheecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecc--cceEEEeecccHHHhhccC
Confidence            3566665  5677777764  478999999999999886432 2333322  2333344  89999999853 3 66777


Q ss_pred             -CCeEEEEeCCCCcEEEEEE-ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         80 -KNKIHVVDPKSLVVLKSFD-AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 -~n~I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       +++|.||-.+||++.++|+ +|+.   .|+|+.++.++- .+|.+.|-++|+--..++++++++.
T Consensus       283 qDGkIKvWri~tG~ClRrFdrAHtk---Gvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfr  345 (508)
T KOG0275|consen  283 QDGKIKVWRIETGQCLRRFDRAHTK---GVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFR  345 (508)
T ss_pred             cCCcEEEEEEecchHHHHhhhhhcc---CeeEEEEccCcchhhcccccceEEEeccccchhHHHhc
Confidence             4799999999999999999 8975   899999997766 7899999999999999999998873

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=98.54  E-value=1.6e-05  Score=61.47  Aligned_cols=128  Identities=11%  Similarity=0.164  Sum_probs=80.9

Q ss_pred             ceeeeeeCCCceeeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCC---CC---CceEEEeee--CCEE
Q psy16020          7 TPYPLNKILDTALPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGL---PH---HSVRSLAAV--YNKV   75 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~--~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~---~~---~pV~~m~~v--~~~L   75 (151)
                      +++..+..+..+.++.+.  +..+|++.. +|.|.+|+...+.     ....+....   +.   .|. .+.+.  ++.+
T Consensus       148 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~-----~~~~~~~~~~~~~~~~~~~~-~i~~s~dg~~~  221 (300)
T TIGR03866       148 EIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRK-----VIKKITFEIPGVHPEAVQPV-GIKLTKDGKTA  221 (300)
T ss_pred             eEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcce-----eeeeeeecccccccccCCcc-ceEECCCCCEE
Confidence            334444444445555554  335766654 8899999875321     112222211   00   222 23343  4567


Q ss_pred             EEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         76 WCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        76 w~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      |++.+  ++|.+||.+++++.+.+..+    ..+.++.++++|  ++++.+.++.|++||.+++++++.|.+-
T Consensus       222 ~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~  290 (300)
T TIGR03866       222 FVALGPANRVAVVDAKTYEVLDYLLVG----QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG  290 (300)
T ss_pred             EEEcCCCCeEEEEECCCCcEEEEEEeC----CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence            87763  68999999999988776533    268888887654  4445567999999999999999988653

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0282|consensus

Probab=98.54  E-value=1.7e-07  Score=78.48  Aligned_cols=116  Identities=14%  Similarity=0.161  Sum_probs=89.7

Q ss_pred             CceeeeEEeCC--e-EEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC---CEEEEEeCCeEEEEeC
Q psy16020         16 DTALPPVHVQG--R-VVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY---NKVWCGYKNKIHVVDP   88 (151)
Q Consensus        16 ~~V~~i~~~~~--~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~---~~Lw~g~~n~I~vid~   88 (151)
                      ..|.+|.+.+.  + +..|..||.|.+|+.-.+       .+.+ ....+..||+.+.+..   .-|=+|++..|+.||+
T Consensus       215 kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~-------~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDt  287 (503)
T KOG0282|consen  215 KGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD-------RRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDT  287 (503)
T ss_pred             cccchhhhccceeeEEEecCCCceEEEEEEecC-------cceehhhhcchhhhhhhhccccCCeeeeeecceeeeeecc
Confidence            57777777653  3 556667899999986422       2233 2334569999999974   3366777899999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +||++..+|+-.    ..++|+.+-++  .+++++..|+.|+.||.++.+.+|++|
T Consensus       288 ETG~~~~~f~~~----~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd  339 (503)
T KOG0282|consen  288 ETGQVLSRFHLD----KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYD  339 (503)
T ss_pred             ccceEEEEEecC----CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHH
Confidence            999999999844    37888888755  579999999999999999999999875

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.53  E-value=5.9e-06  Score=67.67  Aligned_cols=128  Identities=20%  Similarity=0.140  Sum_probs=89.1

Q ss_pred             CCceeeeeeCCCce------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEE
Q psy16020          5 HPTPYPLNKILDTA------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~~~V------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~   77 (151)
                      +.+.+|+.++.+.+      ......++++|++..+|.|..|+...+. .|..+      ++.  ......+..++++|+
T Consensus        39 ~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~------~~~--~~~~~p~v~~~~v~v  110 (377)
T TIGR03300        39 KVDQVWSASVGDGVGHYYLRLQPAVAGGKVYAADADGTVVALDAETGKRLWRVD------LDE--RLSGGVGADGGLVFV  110 (377)
T ss_pred             cceeeeEEEcCCCcCccccccceEEECCEEEEECCCCeEEEEEccCCcEeeeec------CCC--CcccceEEcCCEEEE
Confidence            46789999998766      3567789999999999999999865322 46443      322  111223445789999


Q ss_pred             EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ++. +.++.+|++|+++.-+......   ........++.+ +....++.|..||.++++.+.+.+..
T Consensus       111 ~~~~g~l~ald~~tG~~~W~~~~~~~---~~~~p~v~~~~v-~v~~~~g~l~a~d~~tG~~~W~~~~~  174 (377)
T TIGR03300       111 GTEKGEVIALDAEDGKELWRAKLSSE---VLSPPLVANGLV-VVRTNDGRLTALDAATGERLWTYSRV  174 (377)
T ss_pred             EcCCCEEEEEECCCCcEeeeeccCce---eecCCEEECCEE-EEECCCCeEEEEEcCCCceeeEEccC
Confidence            985 6999999999998766553321   112222334544 45667899999999999988877654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2111|consensus

Probab=98.53  E-value=7.9e-06  Score=65.76  Aligned_cols=127  Identities=15%  Similarity=0.185  Sum_probs=96.4

Q ss_pred             CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCCEEEEEe-C---
Q psy16020          6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNKVWCGY-K---   80 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~~Lw~g~-~---   80 (151)
                      .+|+-++....+|.++....+++.|.| .+.|.||....    |++..+.+.... | .-+-+|....++-..+| |   
T Consensus        85 ~~~i~el~f~~~I~~V~l~r~riVvvl-~~~I~VytF~~----n~k~l~~~et~~NP-kGlC~~~~~~~k~~LafPg~k~  158 (346)
T KOG2111|consen   85 ERCIIELSFNSEIKAVKLRRDRIVVVL-ENKIYVYTFPD----NPKLLHVIETRSNP-KGLCSLCPTSNKSLLAFPGFKT  158 (346)
T ss_pred             CcEEEEEEeccceeeEEEcCCeEEEEe-cCeEEEEEcCC----ChhheeeeecccCC-CceEeecCCCCceEEEcCCCcc
Confidence            578889999999999999999999999 67999998863    233334444333 4 33666666656655555 3   


Q ss_pred             CeEEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEE-EEEEcCCC-eEEEEeCCccceeeeE
Q psy16020         81 NKIHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDS-TLRMYNAHTYQHLQDV  141 (151)
Q Consensus        81 n~I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~-~l~lwd~~t~~~l~~i  141 (151)
                      ++|.|.|....+.  -..+.||.   +.|.||...-+|- ..|++.-+ .||+||++++++++|+
T Consensus       159 GqvQi~dL~~~~~~~p~~I~AH~---s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~  220 (346)
T KOG2111|consen  159 GQVQIVDLASTKPNAPSIINAHD---SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQEL  220 (346)
T ss_pred             ceEEEEEhhhcCcCCceEEEccc---CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeee
Confidence            6899999887666  47788995   4899999996665 56666655 5899999999999986

>KOG1274|consensus

Probab=98.53  E-value=1.6e-06  Score=77.32  Aligned_cols=119  Identities=9%  Similarity=0.094  Sum_probs=97.6

Q ss_pred             CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EEEEEeCC-eEEEEeCCC
Q psy16020         14 ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGYKN-KIHVVDPKS   90 (151)
Q Consensus        14 l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~Lw~g~~n-~I~vid~~t   90 (151)
                      ..+.|.+|....+++.+|..+++|.+|...+.     +....+.=..  .|+|++++.++  .+.+|+++ -|.+++..+
T Consensus        55 ~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~-----~~~~iL~Rft--lp~r~~~v~g~g~~iaagsdD~~vK~~~~~D  127 (933)
T KOG1274|consen   55 SGELVSSIACYSNHFLTGSEQNTVLRYKFPSG-----EEDTILARFT--LPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD  127 (933)
T ss_pred             cCceeEEEeecccceEEeeccceEEEeeCCCC-----Cccceeeeee--ccceEEEEecCCcEEEeecCceeEEEEeccc
Confidence            55789999999999999999999999988632     2222333333  89999999864  57777766 699999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ...++.+.+|..   +|.++.+.+++- +.+..-||.|++||..++.+...+.
T Consensus       128 ~s~~~~lrgh~a---pVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~  177 (933)
T KOG1274|consen  128 SSQEKVLRGHDA---PVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT  177 (933)
T ss_pred             cchheeecccCC---ceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence            999999999964   999999998877 6777889999999999888776653

>KOG0289|consensus

Probab=98.53  E-value=3.4e-06  Score=70.25  Aligned_cols=121  Identities=13%  Similarity=0.240  Sum_probs=89.7

Q ss_pred             CceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeeeCCEEEEEeC---CeEEEEeC
Q psy16020         16 DTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAVYNKVWCGYK---NKIHVVDP   88 (151)
Q Consensus        16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v~~~Lw~g~~---n~I~vid~   88 (151)
                      .+|..+.-  .++++..+..||+.+..+...+.       ....+.+  +.-.+++.+++.+-|-.|.|   +.|.+||.
T Consensus       304 ~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~-------~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl  376 (506)
T KOG0289|consen  304 EPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS-------QLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL  376 (506)
T ss_pred             ccceeeeeccCCcEEEEecCCceEEEEEccCCc-------EEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence            34555543  34577777778888887764321       2233333  23558999999766555554   58999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEEEE-EEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      ++......|.+|+.   +|..+.++.+|-|+ +..+|+.|++||.+..+..++|.+...
T Consensus       377 ks~~~~a~Fpght~---~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~  432 (506)
T KOG0289|consen  377 KSQTNVAKFPGHTG---PVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEK  432 (506)
T ss_pred             CCccccccCCCCCC---ceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecccc
Confidence            99999999999985   99999999999865 556777799999999998888877654

>KOG0273|consensus

Probab=98.52  E-value=2.3e-06  Score=71.72  Aligned_cols=111  Identities=14%  Similarity=0.170  Sum_probs=82.1

Q ss_pred             CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE-eCCeEEEEeCC
Q psy16020         14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG-YKNKIHVVDPK   89 (151)
Q Consensus        14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g-~~n~I~vid~~   89 (151)
                      .+.||++|+..+  +++..|..||++.+|+... |.|    ...+++..  .|---+.-.+ ++..+. .++.|+|+-..
T Consensus       275 HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~-g~~----~q~f~~~s--~~~lDVdW~~~~~F~ts~td~~i~V~kv~  347 (524)
T KOG0273|consen  275 HKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT-GTV----KQQFEFHS--APALDVDWQSNDEFATSSTDGCIHVCKVG  347 (524)
T ss_pred             cCCceEEEEEcCCCCEEEeccCCccEEEEeccC-ceE----EEeeeecc--CCccceEEecCceEeecCCCceEEEEEec
Confidence            447999999975  5799999999999998643 322    23455554  5511122233 443332 25789999888


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t  134 (151)
                      --...++|.+|++   .|++|.+.+.|. +.|++.|+++++|+-..
T Consensus       348 ~~~P~~t~~GH~g---~V~alk~n~tg~LLaS~SdD~TlkiWs~~~  390 (524)
T KOG0273|consen  348 EDRPVKTFIGHHG---EVNALKWNPTGSLLASCSDDGTLKIWSMGQ  390 (524)
T ss_pred             CCCcceeeecccC---ceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence            8889999999986   999999996655 89999999999999543

>KOG0292|consensus

Probab=98.52  E-value=4.9e-07  Score=80.65  Aligned_cols=115  Identities=17%  Similarity=0.213  Sum_probs=94.5

Q ss_pred             CceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeCCE-EEEEeCC--eEEEEeCC
Q psy16020         16 DTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVYNK-VWCGYKN--KIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~~~-Lw~g~~n--~I~vid~~   89 (151)
                      +.|-.|.+++.+  +.++|-+|.|-.|++..+-        .+ +.-.+..|||.+.++..+ |+++.|+  +|.|||-+
T Consensus        10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~t--------li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk   81 (1202)
T KOG0292|consen   10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT--------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK   81 (1202)
T ss_pred             ccccceecCCCCCEEEEeecCceeeeehhhhhh--------HHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence            456778888876  9999999999998875321        11 233456999999999866 8888874  89999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCccceeeeE
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +.++.-++.+|-|   +|....+-...=| +|+++|-+||+|+..+.+++..+
T Consensus        82 ~rrclftL~GHlD---YVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavl  131 (1202)
T KOG0292|consen   82 TRRCLFTLLGHLD---YVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVL  131 (1202)
T ss_pred             cceehhhhccccc---eeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEE
Confidence            9999999999977   9999888866555 69999999999999999988765

>KOG2048|consensus

Probab=98.50  E-value=1.1e-05  Score=70.10  Aligned_cols=129  Identities=14%  Similarity=0.124  Sum_probs=100.2

Q ss_pred             CCceeeeeeCC--CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020          5 HPTPYPLNKIL--DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~l~--~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      .|=+...|..|  .+|-.|++. ++++|-...||+|.-|+..     +++....++...  .+|=+|+..+  +.+-+||
T Consensus        57 ~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~-----~lk~~~~~d~~g--g~IWsiai~p~~~~l~Igc  129 (691)
T KOG2048|consen   57 NWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLH-----TLKQKYNIDSNG--GAIWSIAINPENTILAIGC  129 (691)
T ss_pred             CceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecc-----cCceeEEecCCC--cceeEEEeCCccceEEeec
Confidence            34455666777  599999998 7799999999999999876     334444445544  8999999974  7799999


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      + +-++.++....+++....-- +..+.|.++.+.+++. .++++.|+.|++||+.+++-+.-+
T Consensus       130 ddGvl~~~s~~p~~I~~~r~l~-rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~  192 (691)
T KOG2048|consen  130 DDGVLYDFSIGPDKITYKRSLM-RQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHII  192 (691)
T ss_pred             CCceEEEEecCCceEEEEeecc-cccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEe
Confidence            6 47888888888776553321 2235899999999999 899999999999999998887733

>KOG0319|consensus

Probab=98.50  E-value=2.6e-06  Score=74.50  Aligned_cols=122  Identities=13%  Similarity=0.195  Sum_probs=93.2

Q ss_pred             CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC----CCCCceEEEeeeC-CEEEE-EeCC-eEEE
Q psy16020         16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG----LPHHSVRSLAAVY-NKVWC-GYKN-KIHV   85 (151)
Q Consensus        16 ~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~----~~~~pV~~m~~v~-~~Lw~-g~~n-~I~v   85 (151)
                      .+|.++....+   .+..+..|++|-+|....+.  +.+.|-.++..    .+..-|+|+++.+ ++|.| |+.+ ...+
T Consensus       412 ~svgava~~~~~asffvsvS~D~tlK~W~l~~s~--~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKi  489 (775)
T KOG0319|consen  412 NSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSK--ETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKI  489 (775)
T ss_pred             cccceeeecccCccEEEEecCCceEEEecCCCcc--cccccceehhhHHHHhhcccccceEecCCCceEEecccccceee
Confidence            46666665433   45566779999999987422  33344444322    1359999999985 55554 4444 6999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |+.+.++++.++.+|++   .|-++.++.. .+..+++.|.+|++|..++++++++++
T Consensus       490 W~le~~~l~~vLsGH~R---Gvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e  544 (775)
T KOG0319|consen  490 WDLEQLRLLGVLSGHTR---GVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE  544 (775)
T ss_pred             ecccCceEEEEeeCCcc---ceEEEEeccccceeEeccCCceEEEEEeccceeeeeec
Confidence            99999999999999987   8999999855 569999999999999999999999996

>KOG0299|consensus

Probab=98.49  E-value=5.2e-06  Score=69.36  Aligned_cols=134  Identities=16%  Similarity=0.216  Sum_probs=99.2

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCC----------------------------CC------CCCCCcc-eEEEe
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGP----------------------------DG------QWDLSKY-HTVTL   58 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~----------------------------~~------~wd~~~~-~~i~l   58 (151)
                      ++|.+|.+..+  ++|++..|+++.+|+.+.                            +|      -|++..- +.+--
T Consensus       245 ~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifr  324 (479)
T KOG0299|consen  245 GAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFR  324 (479)
T ss_pred             cceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeee
Confidence            79999998765  799999999999998762                            11      3555222 22222


Q ss_pred             CCCCCceEEEeeeC-CEEEEEeCC-eEEEEeCCCCcEEEEEE-ecCCCCC--------ceeEEEEe-CCEEEEEEcCCCe
Q psy16020         59 GLPHHSVRSLAAVY-NKVWCGYKN-KIHVVDPKSLVVLKSFD-AHPRRES--------QVRQMTWA-GDGVWVSIRLDST  126 (151)
Q Consensus        59 ~~~~~pV~~m~~v~-~~Lw~g~~n-~I~vid~~t~~i~~~~~-~h~~~~~--------~I~~m~~~-~~~vwis~~~d~~  126 (151)
                      + +..++-|.++++ +++-.|++| .|+.|++-..+++.+.. +|.....        =|+.++.. +..+.+|++.++-
T Consensus       325 g-~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~  403 (479)
T KOG0299|consen  325 G-GEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGC  403 (479)
T ss_pred             C-CCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCc
Confidence            3 246999999986 668889875 89999999999776654 5643222        35555555 7788999999999


Q ss_pred             EEEEeCCcc----ceeeeEeCCcccccc
Q psy16020        127 LRMYNAHTY----QHLQDVDIEPYVSKM  150 (151)
Q Consensus       127 l~lwd~~t~----~~l~~idi~~~v~~~  150 (151)
                      ||||-+.+.    +++.++.+.-+|+++
T Consensus       404 vrLW~i~~g~r~i~~l~~ls~~GfVNsl  431 (479)
T KOG0299|consen  404 VRLWKIEDGLRAINLLYSLSLVGFVNSL  431 (479)
T ss_pred             eEEEEecCCccccceeeecccccEEEEE
Confidence            999999874    888888887777653

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.43  E-value=8.2e-05  Score=56.46  Aligned_cols=134  Identities=16%  Similarity=0.094  Sum_probs=91.8

Q ss_pred             CCCCceeeeeeCC---Cceee-eEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEE-EeeeCCEEEE
Q psy16020          3 YPHPTPYPLNKIL---DTALP-PVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAVYNKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~---~~V~~-i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~-m~~v~~~Lw~   77 (151)
                      ..+.+.+|+.++.   ....+ ....++++|++..+|.|..|+... |    +......+..   ++.. ....++.+++
T Consensus        10 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~t-G----~~~W~~~~~~---~~~~~~~~~~~~v~v   81 (238)
T PF13360_consen   10 PRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKT-G----KVLWRFDLPG---PISGAPVVDGGRVYV   81 (238)
T ss_dssp             TTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTT-S----EEEEEEECSS---CGGSGEEEETTEEEE
T ss_pred             CCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCC-C----CEEEEeeccc---cccceeeeccccccc
Confidence            3578899999983   23332 334788999999999999999743 2    2233445533   2222 3667899999


Q ss_pred             EeC-CeEEEEeCCCCcEEEEE-EecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         78 GYK-NKIHVVDPKSLVVLKSF-DAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        78 g~~-n~I~vid~~t~~i~~~~-~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++. +.|+.+|++|+++.-++ ......  ..........++.+. ....++.|..+|.++++.+.+..+..
T Consensus        82 ~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~l~~~d~~tG~~~w~~~~~~  152 (238)
T PF13360_consen   82 GTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLY-VGTSSGKLVALDPKTGKLLWKYPVGE  152 (238)
T ss_dssp             EETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEE-EEETCSEEEEEETTTTEEEEEEESST
T ss_pred             ccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEE-EEeccCcEEEEecCCCcEEEEeecCC
Confidence            985 68999999999998885 433111  112334445566654 55559999999999999999887743

...

>KOG0294|consensus

Probab=98.42  E-value=4.6e-06  Score=67.12  Aligned_cols=120  Identities=18%  Similarity=0.142  Sum_probs=95.7

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEEEEeC-CeEEEEeCCC
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw~g~~-n~I~vid~~t   90 (151)
                      .++.++.-..-+|-.|..|-+|.+|+.....       +.=.|-.++..|+|+.+-.    +.|-.|++ +.|.+|+..+
T Consensus        44 ~sitavAVs~~~~aSGssDetI~IYDm~k~~-------qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~  116 (362)
T KOG0294|consen   44 GSITALAVSGPYVASGSSDETIHIYDMRKRK-------QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGS  116 (362)
T ss_pred             cceeEEEecceeEeccCCCCcEEEEeccchh-------hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCC
Confidence            5889998888889999999999999875211       1112223569999999964    36776664 6999999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .+..+++.+|+-   +|+.+..-+.+- =+|.++|..+|+|+.-+++.-...++..
T Consensus       117 W~~~~slK~H~~---~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~  169 (362)
T KOG0294|consen  117 WELLKSLKAHKG---QVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKN  169 (362)
T ss_pred             eEEeeeeccccc---ccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCC
Confidence            999999999975   799999998776 5899999999999999887766665544

>KOG1446|consensus

Probab=98.41  E-value=4.2e-05  Score=61.34  Aligned_cols=132  Identities=15%  Similarity=0.147  Sum_probs=87.8

Q ss_pred             CceeeeeeCCCceeeeEEeCCeEEEEecCC--cEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeC--CEEEEEeC
Q psy16020          6 PTPYPLNKILDTALPPVHVQGRVVCALADG--SVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVY--NKVWCGYK   80 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG--~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~--~~Lw~g~~   80 (151)
                      ++|..-+.++....+ .|.+.-++.|+++|  .|-+|+...-   |-.+-..+.+.. .....+.|.+.+  +.+-++..
T Consensus       132 ~~cqg~l~~~~~pi~-AfDp~GLifA~~~~~~~IkLyD~Rs~---dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~  207 (311)
T KOG1446|consen  132 KKCQGLLNLSGRPIA-AFDPEGLIFALANGSELIKLYDLRSF---DKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTN  207 (311)
T ss_pred             CCCceEEecCCCcce-eECCCCcEEEEecCCCeEEEEEeccc---CCCCceeEccCCCCccceeeeEEcCCCCEEEEEeC
Confidence            344444444433322 44444455555555  4888988632   223445666763 347788888863  45666664


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEE-EEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQM-TWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m-~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       +.++++|+-+|+++.+|+.+++... +... .+.+++- .+++++|++|.+|+.++++......
T Consensus       208 ~s~~~~lDAf~G~~~~tfs~~~~~~~-~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~  271 (311)
T KOG1446|consen  208 ASFIYLLDAFDGTVKSTFSGYPNAGN-LPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLR  271 (311)
T ss_pred             CCcEEEEEccCCcEeeeEeeccCCCC-cceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEec
Confidence             6899999999999999999987432 2222 3346665 6789999999999999998887764

>KOG0973|consensus

Probab=98.40  E-value=7e-06  Score=74.05  Aligned_cols=124  Identities=15%  Similarity=0.229  Sum_probs=93.4

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCC-CCCC---------CCCcceEEE-eCCCCCceEEEeee-CCEEEEEe--
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGP-DGQW---------DLSKYHTVT-LGLPHHSVRSLAAV-YNKVWCGY--   79 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~-~~~w---------d~~~~~~i~-l~~~~~pV~~m~~v-~~~Lw~g~--   79 (151)
                      .+|.|..+.++  ++..|..|+.|.||++.. ++.|         +.+..+.+. +..+..-|.-+.-. ++.+-+.+  
T Consensus        70 ~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~  149 (942)
T KOG0973|consen   70 GSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSL  149 (942)
T ss_pred             CceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecc
Confidence            68999988654  788899899999999983 1122         223333332 22334666555554 35555555  


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +|+|.+||..|++..+.+.+|..   .|.-+.+++-|- +.|.+.|.+|++|.+.+......|+
T Consensus       150 DnsViiwn~~tF~~~~vl~~H~s---~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It  210 (942)
T KOG0973|consen  150 DNSVIIWNAKTFELLKVLRGHQS---LVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSIT  210 (942)
T ss_pred             cceEEEEccccceeeeeeecccc---cccceEECCccCeeeeecCCceEEEEEcccceeeEeec
Confidence            58999999999999999999974   899999998888 7889999999999999888777775

>KOG0296|consensus

Probab=98.39  E-value=7.5e-06  Score=66.89  Aligned_cols=115  Identities=18%  Similarity=0.229  Sum_probs=86.5

Q ss_pred             CCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee---e--CCEEEEEeC-CeEE
Q psy16020         14 ILDTALPPVHVQGR--VVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA---V--YNKVWCGYK-NKIH   84 (151)
Q Consensus        14 l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~---v--~~~Lw~g~~-n~I~   84 (151)
                      -+|+|.|+.++-.-  +-.|-.+|.|.||.-..++ .|.+.           +++.-|.-   +  ...|.+|+. +.+.
T Consensus       105 HKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~-----------~e~~dieWl~WHp~a~illAG~~DGsvW  173 (399)
T KOG0296|consen  105 HKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD-----------QEVEDIEWLKWHPRAHILLAGSTDGSVW  173 (399)
T ss_pred             CCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee-----------cccCceEEEEecccccEEEeecCCCcEE
Confidence            34899999886544  4445556999999876443 33222           23333332   2  245888885 7999


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|.+.+....+.|.+|+.   ++++=.+.++|- .+++..|++|++|+..|++++-.+.
T Consensus       174 mw~ip~~~~~kv~~Gh~~---~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~  229 (399)
T KOG0296|consen  174 MWQIPSQALCKVMSGHNS---PCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT  229 (399)
T ss_pred             EEECCCcceeeEecCCCC---CcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence            999999999999999964   788877777777 7789999999999999999999886

>KOG0295|consensus

Probab=98.39  E-value=1.3e-05  Score=65.46  Aligned_cols=109  Identities=17%  Similarity=0.290  Sum_probs=82.0

Q ss_pred             eCCeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC------------C-----EEEEEeCC-eEE
Q psy16020         24 VQGRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY------------N-----KVWCGYKN-KIH   84 (151)
Q Consensus        24 ~~~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~------------~-----~Lw~g~~n-~I~   84 (151)
                      .++.++++.+|- +|.+|-.....       ....+..++.||.|++...            +     -+-.|+.+ .|+
T Consensus       245 ~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk  317 (406)
T KOG0295|consen  245 QDGTIIASCSNDQTLRVWVVATKQ-------CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIK  317 (406)
T ss_pred             CCeeEEEecCCCceEEEEEeccch-------hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEE
Confidence            355677776654 57777654211       1123445668888887741            1     35555654 799


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +||..|+.++-++.+|-+   -|..+++++.|- .+|+.+|.+|++||.+..+++..++
T Consensus       318 ~wdv~tg~cL~tL~ghdn---wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~  373 (406)
T KOG0295|consen  318 IWDVSTGMCLFTLVGHDN---WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE  373 (406)
T ss_pred             EEeccCCeEEEEEecccc---eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC
Confidence            999999999999999965   899999996666 7899999999999999999999887

>KOG0305|consensus

Probab=98.38  E-value=2.8e-06  Score=72.37  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=105.2

Q ss_pred             CceeeeeeC--CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCCceEEEeeeCCEEEEEeC--
Q psy16020          6 PTPYPLNKI--LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHHSVRSLAAVYNKVWCGYK--   80 (151)
Q Consensus         6 ~~~l~~i~l--~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~pV~~m~~v~~~Lw~g~~--   80 (151)
                      .+.+..+..  ..-|-||......+-.|..+|.|..++.....       ..+. +..+.+-|..|....+....++|  
T Consensus       249 ~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~-------~~~~~~~~H~qeVCgLkws~d~~~lASGgn  321 (484)
T KOG0305|consen  249 QKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQ-------HVVSTLQGHRQEVCGLKWSPDGNQLASGGN  321 (484)
T ss_pred             ccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecch-------hhhhhhhcccceeeeeEECCCCCeeccCCC
Confidence            344555555  46889999998899999999999999875321       1122 44456889889888665555553  


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcC--CCeEEEEeCCccceeeeEeCCcccccc
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRL--DSTLRMYNAHTYQHLQDVDIEPYVSKM  150 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~--d~~l~lwd~~t~~~l~~idi~~~v~~~  150 (151)
                       |.++|||..+.+.+.++..|..   .|.+|.+++  .+++++++.  |..|++||+.++++++.+|...-|..+
T Consensus       322 DN~~~Iwd~~~~~p~~~~~~H~a---AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL  393 (484)
T KOG0305|consen  322 DNVVFIWDGLSPEPKFTFTEHTA---AVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSL  393 (484)
T ss_pred             ccceEeccCCCccccEEEeccce---eeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeE
Confidence             6899999999999999999975   899999994  577877765  899999999999999999987766543

>KOG1445|consensus

Probab=98.38  E-value=1.4e-06  Score=75.74  Aligned_cols=120  Identities=18%  Similarity=0.198  Sum_probs=94.6

Q ss_pred             eeCCCceeeeEEe---CCeEEEEecCCcEEEEEcCCCCC-CCCCcc-eEEEeCCCCCceEEEeeeC---CEEEEEe-CCe
Q psy16020         12 NKILDTALPPVHV---QGRVVCALADGSVAIFRRGPDGQ-WDLSKY-HTVTLGLPHHSVRSLAAVY---NKVWCGY-KNK   82 (151)
Q Consensus        12 i~l~~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~-wd~~~~-~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~   82 (151)
                      +.-...|+++...   +.++-||..||.|.+|+..++|- =+...| +.++.+.  ..|.++-++.   +-|..++ +-.
T Consensus       624 l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~--eKI~slRfHPLAadvLa~asyd~T  701 (1012)
T KOG1445|consen  624 LFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHG--EKITSLRFHPLAADVLAVASYDST  701 (1012)
T ss_pred             cccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeeccc--ceEEEEEecchhhhHhhhhhccce
Confidence            3333456666553   45899999999999999986552 122233 4567766  8999998874   6677666 458


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                      |.+||..+++...+|.+|++   +|+.++++++|- ..+...|+.|++|..++.+
T Consensus       702 i~lWDl~~~~~~~~l~gHtd---qIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e  753 (1012)
T KOG1445|consen  702 IELWDLANAKLYSRLVGHTD---QIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE  753 (1012)
T ss_pred             eeeeehhhhhhhheeccCcC---ceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence            99999999999999999998   999999998887 7889999999999999743

>KOG3881|consensus

Probab=98.37  E-value=3.6e-06  Score=69.16  Aligned_cols=124  Identities=13%  Similarity=0.131  Sum_probs=94.4

Q ss_pred             ceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCC
Q psy16020         17 TALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        17 ~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~   89 (151)
                      =+++|.|.++    ++..++--|++.+|+...+.    .+...+.+..  .||.|+...  ++.+|+|.. +.+..||..
T Consensus       204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR----RPV~~fd~~E--~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r  277 (412)
T KOG3881|consen  204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR----RPVAQFDFLE--NPISSTGLTPSGNFIYTGNTKGQLAKFDLR  277 (412)
T ss_pred             eeccceecCCCCCceEEEEecceeEEEecCcccC----cceeEecccc--CcceeeeecCCCcEEEEecccchhheeccc
Confidence            4567777665    45566777999999876433    2445667776  999999986  578999985 789999999


Q ss_pred             CCcEEEE-EEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020         90 SLVVLKS-FDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK  149 (151)
Q Consensus        90 t~~i~~~-~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~  149 (151)
                      +++.... |.+-+-   +|..+.+.+. .+..|++-|..||++|+.|-+++..+=+....+.
T Consensus       278 ~~kl~g~~~kg~tG---sirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~  336 (412)
T KOG3881|consen  278 GGKLLGCGLKGITG---SIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTF  336 (412)
T ss_pred             CceeeccccCCccC---CcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccE
Confidence            9998777 776654   6666666666 6799999999999999999777776655554444

>KOG0301|consensus

Probab=98.37  E-value=5.3e-06  Score=72.27  Aligned_cols=112  Identities=22%  Similarity=0.332  Sum_probs=84.2

Q ss_pred             CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEE--EEeCCeEEEEeCCCCc
Q psy16020         16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVW--CGYKNKIHVVDPKSLV   92 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw--~g~~n~I~vid~~t~~   92 (151)
                      .+|-..... ++....|.||-+|.+|.-+       ...+  .+..+..-||.+++.++.=+  |+.++.|..||. +++
T Consensus       141 asVWAv~~l~e~~~vTgsaDKtIklWk~~-------~~l~--tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge  210 (745)
T KOG0301|consen  141 ASVWAVASLPENTYVTGSADKTIKLWKGG-------TLLK--TFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGE  210 (745)
T ss_pred             hheeeeeecCCCcEEeccCcceeeeccCC-------chhh--hhccchhheeeeEEecCCCeEeecCCceEEEEec-cCc
Confidence            345554443 4457788899999998532       1111  23335588999999976434  444568999988 899


Q ss_pred             EEEEEEecCCCCCceeEEE-EeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         93 VLKSFDAHPRRESQVRQMT-WAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        93 i~~~~~~h~~~~~~I~~m~-~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +..+..+|++   .|.+|. ..++++.+|+++|+++|+|+..  ++.|.|.
T Consensus       211 ~l~~~~ghtn---~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~  256 (745)
T KOG0301|consen  211 VLLEMHGHTN---FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVIT  256 (745)
T ss_pred             eeeeeeccce---EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEe
Confidence            9999999986   788888 4478889999999999999998  8888884

>KOG0264|consensus

Probab=98.34  E-value=4.5e-06  Score=69.35  Aligned_cols=108  Identities=13%  Similarity=0.218  Sum_probs=81.4

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCC-CCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC--CCcEEEEE
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK--SLVVLKSF   97 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd-~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~--t~~i~~~~   97 (151)
                      ++++..|..|++++.|+.++.+.=+ ...|+. ....+...|.-.++.  ...|+++++  +++.+||++  +-+..+.-
T Consensus       190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~-~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~  268 (422)
T KOG0264|consen  190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKT-IFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSV  268 (422)
T ss_pred             ceeEeeccCCCcEEEEeccccccCCccccceE-EeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccc
Confidence            4579999999999999998644311 112222 222345788777775  466888874  689999999  67788888


Q ss_pred             EecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccc
Q psy16020         98 DAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      .+|+.   .|+|+.+.  ++.++++++-|++|+|||.|...
T Consensus       269 ~ah~~---~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~  306 (422)
T KOG0264|consen  269 KAHSA---EVNCVAFNPFNEFILATGSADKTVALWDLRNLN  306 (422)
T ss_pred             cccCC---ceeEEEeCCCCCceEEeccCCCcEEEeechhcc
Confidence            89975   89999998  55778999999999999999643

>KOG0305|consensus

Probab=98.31  E-value=7.3e-06  Score=69.85  Aligned_cols=119  Identities=18%  Similarity=0.169  Sum_probs=94.1

Q ss_pred             CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCC-eEEEEeCCCC
Q psy16020         15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-KIHVVDPKSL   91 (151)
Q Consensus        15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n-~I~vid~~t~   91 (151)
                      .+.|+++.+.  ++.|-||..+|.|.+|+...     ......+..+ +..-|-|++-.+..+=+|+++ .|..+|....
T Consensus       217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~-----~k~~~~~~~~-h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~  290 (484)
T KOG0305|consen  217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE-----QKKTRTLRGS-HASRVGSLAWNSSVLSSGSRDGKILNHDVRIS  290 (484)
T ss_pred             CCceEEEEECCCCCEEEEeecCCeEEEEehhh-----ccccccccCC-cCceeEEEeccCceEEEecCCCcEEEEEEecc
Confidence            5789999887  66899999999999998752     2233333332 347788888887888899974 8999999877


Q ss_pred             cEEE-EEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         92 VVLK-SFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        92 ~i~~-~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +..- ++.+|.   +.|.-|+++.++. +.|+++|+.+.+||..+.++++.+.
T Consensus       291 ~~~~~~~~~H~---qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~  340 (484)
T KOG0305|consen  291 QHVVSTLQGHR---QEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFT  340 (484)
T ss_pred             hhhhhhhhccc---ceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEe
Confidence            7433 488886   4899999998887 8999999999999998888877764

>KOG2695|consensus

Probab=98.30  E-value=3.2e-06  Score=68.87  Aligned_cols=124  Identities=14%  Similarity=0.173  Sum_probs=96.1

Q ss_pred             CCceeeeEEe--CCeEEEEecCCcEEEEEcCCC---CCCCCCcceEEEeCCCCCceEEEeeeC--CE-EEEEe-CCeEEE
Q psy16020         15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPD---GQWDLSKYHTVTLGLPHHSVRSLAAVY--NK-VWCGY-KNKIHV   85 (151)
Q Consensus        15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~---~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~-Lw~g~-~n~I~v   85 (151)
                      ++-|+++.|.  ++-||.|+-||.|.+++....   ..|     ....+.. .+.|+||....  ++ |-++. .++|..
T Consensus       252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~-----~a~rlyh-~Ssvtslq~Lq~s~q~LmaS~M~gkikL  325 (425)
T KOG2695|consen  252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGW-----CAQRLYH-DSSVTSLQILQFSQQKLMASDMTGKIKL  325 (425)
T ss_pred             chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCc-----ceEEEEc-CcchhhhhhhccccceEeeccCcCceeE
Confidence            3456666664  478999999999999987532   234     2345543 38999998864  44 54444 589999


Q ss_pred             EeCCCCcE---EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         86 VDPKSLVV---LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        86 id~~t~~i---~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ||.+-.|.   ..+.|+|.+...++-...--.+|+-+|.++|...|+|-.+++.++-+|.+.
T Consensus       326 yD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~  387 (425)
T KOG2695|consen  326 YDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFP  387 (425)
T ss_pred             eeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCC
Confidence            99988777   899999998777766666668899889999999999999999999988643

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=98.30  E-value=5.6e-05  Score=58.36  Aligned_cols=103  Identities=13%  Similarity=0.221  Sum_probs=71.5

Q ss_pred             EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCC
Q psy16020         29 VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRE  104 (151)
Q Consensus        29 ~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~  104 (151)
                      +.+..||.|.+|+...+     +....+..+   ..++++.+..  +.+++++  .+.|++||..+++..+.+..+.+  
T Consensus         5 ~s~~~d~~v~~~d~~t~-----~~~~~~~~~---~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--   74 (300)
T TIGR03866         5 VSNEKDNTISVIDTATL-----EVTRTFPVG---QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD--   74 (300)
T ss_pred             EEecCCCEEEEEECCCC-----ceEEEEECC---CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC--
Confidence            35566899999987421     222344433   3356777753  4577654  36899999999999888876542  


Q ss_pred             CceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        105 SQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       105 ~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                        +..+.++++  .++++...++.|++||.++.+.+..++.
T Consensus        75 --~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~  113 (300)
T TIGR03866        75 --PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV  113 (300)
T ss_pred             --ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC
Confidence              345666644  4577778899999999999888887753

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0295|consensus

Probab=98.29  E-value=4.5e-06  Score=68.19  Aligned_cols=125  Identities=21%  Similarity=0.307  Sum_probs=93.3

Q ss_pred             CCCceeeeEEeCCeEEEEec--CCcEEEEEcCCC----------------------------------CCCCCCcc-eEE
Q psy16020         14 ILDTALPPVHVQGRVVCALA--DGSVAIFRRGPD----------------------------------GQWDLSKY-HTV   56 (151)
Q Consensus        14 l~~~V~~i~~~~~~v~vgl~--nG~l~v~~~~~~----------------------------------~~wd~~~~-~~i   56 (151)
                      ...+|..+.++++...++++  |++|.+|++..+                                  .-||++.. ..+
T Consensus       107 ~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~  186 (406)
T KOG0295|consen  107 HRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCI  186 (406)
T ss_pred             cccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHH
Confidence            34689999999998777777  999999988631                                  13555442 111


Q ss_pred             E-eCCCCCceEEEeee--CCEEE-EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020         57 T-LGLPHHSVRSLAAV--YNKVW-CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN  131 (151)
Q Consensus        57 ~-l~~~~~pV~~m~~v--~~~Lw-~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd  131 (151)
                      + +..+..-|.|..+.  ++.+- |+.++.|+.|+..|+-++++|.+|+.   -|..+...++|. ..|+++|.+|++|=
T Consensus       187 ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e---wvr~v~v~~DGti~As~s~dqtl~vW~  263 (406)
T KOG0295|consen  187 KSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE---WVRMVRVNQDGTIIASCSNDQTLRVWV  263 (406)
T ss_pred             HHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchH---hEEEEEecCCeeEEEecCCCceEEEEE
Confidence            1 12234667776664  56654 44468999999999999999999975   788888888887 88999999999999


Q ss_pred             CCccceeeeE
Q psy16020        132 AHTYQHLQDV  141 (151)
Q Consensus       132 ~~t~~~l~~i  141 (151)
                      ..+.++.+++
T Consensus       264 ~~t~~~k~~l  273 (406)
T KOG0295|consen  264 VATKQCKAEL  273 (406)
T ss_pred             eccchhhhhh
Confidence            9998655544

>KOG4283|consensus

Probab=98.29  E-value=1.5e-05  Score=63.96  Aligned_cols=66  Identities=15%  Similarity=0.294  Sum_probs=50.4

Q ss_pred             EEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCcc-ceeeeEeC
Q psy16020         75 VWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTY-QHLQDVDI  143 (151)
Q Consensus        75 Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~-~~l~~idi  143 (151)
                      +.+|.++ +|..-|..+|..-+++.+|.+   .|-++.+++  +.|+.+++-|+.+|+||.+.. -+...+|-
T Consensus       161 iA~gtr~~~VrLCDi~SGs~sH~LsGHr~---~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~  230 (397)
T KOG4283|consen  161 IAAGTRDVQVRLCDIASGSFSHTLSGHRD---GVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQ  230 (397)
T ss_pred             EEEecCCCcEEEEeccCCcceeeeccccC---ceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeec
Confidence            4556644 788888888888888888876   788888874  577889999999999999974 55555553

>KOG0282|consensus

Probab=98.27  E-value=4.7e-06  Score=69.98  Aligned_cols=139  Identities=14%  Similarity=0.114  Sum_probs=105.4

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC---CeEEEEecCCcEEEEEcCC-------------------------------CC--
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ---GRVVCALADGSVAIFRRGP-------------------------------DG--   46 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~-------------------------------~~--   46 (151)
                      .-+.+|+.+.++...++|+.+++   |.+++|++||.|.-|+..+                               ++  
T Consensus       287 tETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~  366 (503)
T KOG0282|consen  287 TETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSV  366 (503)
T ss_pred             cccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccE
Confidence            34789999999999999999975   4599999999999998763                               11  


Q ss_pred             -CCCCCcceEEEeC--CCCCceEEEeeeCCEEEEEe---CCeEEEEeCCC---CcEEEEEEecCCCCCceeEEEEeCCEE
Q psy16020         47 -QWDLSKYHTVTLG--LPHHSVRSLAAVYNKVWCGY---KNKIHVVDPKS---LVVLKSFDAHPRRESQVRQMTWAGDGV  117 (151)
Q Consensus        47 -~wd~~~~~~i~l~--~~~~pV~~m~~v~~~Lw~g~---~n~I~vid~~t---~~i~~~~~~h~~~~~~I~~m~~~~~~v  117 (151)
                       .|+.+.+-.++.-  ......+||....+.=|.+|   +|.|+++.+.-   +.-++.|++|.-. ..-..+.++++|-
T Consensus       367 riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~va-Gys~~v~fSpDG~  445 (503)
T KOG0282|consen  367 RIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVA-GYSCQVDFSPDGR  445 (503)
T ss_pred             EEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceecc-CceeeEEEcCCCC
Confidence             3665555444332  23477889988876656666   58999998653   4577889999754 4455567887765


Q ss_pred             -EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020        118 -WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       118 -wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       ++|++.|+.+.+||.+|.+++..+.
T Consensus       446 ~l~SGdsdG~v~~wdwkt~kl~~~lk  471 (503)
T KOG0282|consen  446 TLCSGDSDGKVNFWDWKTTKLVSKLK  471 (503)
T ss_pred             eEEeecCCccEEEeechhhhhhhccc
Confidence             8999999999999999988887774

>KOG0272|consensus

Probab=98.26  E-value=6.3e-06  Score=68.36  Aligned_cols=117  Identities=18%  Similarity=0.239  Sum_probs=86.5

Q ss_pred             CCceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC-C-EEEEEe-CCeEEEEeCC
Q psy16020         15 LDTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY-N-KVWCGY-KNKIHVVDPK   89 (151)
Q Consensus        15 ~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~-~-~Lw~g~-~n~I~vid~~   89 (151)
                      ...|++|.|..+ .|.+..+.-   -|    +..||+.....+ -|..+-.||..+.+.. + +|..|+ +|.+.|||.+
T Consensus       303 s~~v~~iaf~~DGSL~~tGGlD---~~----~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR  375 (459)
T KOG0272|consen  303 SKGVFSIAFQPDGSLAATGGLD---SL----GRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR  375 (459)
T ss_pred             ccccceeEecCCCceeeccCcc---ch----hheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeec
Confidence            358999988763 222222111   11    124777766544 5555669999999964 3 577776 4799999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeC-CE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~-~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      -.+...++.+|++   -|+.+.+++ .| -++|++.|+++++|-.+++++++.+
T Consensus       376 ~r~~ly~ipAH~n---lVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL  426 (459)
T KOG0272|consen  376 MRSELYTIPAHSN---LVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL  426 (459)
T ss_pred             ccccceecccccc---hhhheEecccCCeEEEEcccCcceeeecCCCcccchhh
Confidence            9999999999997   788888884 34 3899999999999999999998765

>KOG0318|consensus

Probab=98.24  E-value=2.7e-05  Score=66.26  Aligned_cols=111  Identities=17%  Similarity=0.171  Sum_probs=81.1

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE-EEEEe-C-CeEEEEeCCCCcE
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK-VWCGY-K-NKIHVVDPKSLVV   93 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~-Lw~g~-~-n~I~vid~~t~~i   93 (151)
                      +...+.-.++.+-||+.||.|-+|....+..    ..+...+ .+..||+++.+..+- ..++| . .+|.+||.++.+.
T Consensus       447 s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l----~ee~~~~-~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~  521 (603)
T KOG0318|consen  447 SAVAVSPDGSEVAVGGQDGKVHVYSLSGDEL----KEEAKLL-EHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV  521 (603)
T ss_pred             ceEEEcCCCCEEEEecccceEEEEEecCCcc----cceeeee-cccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce
Confidence            3333444466899999999999999874331    1122222 335999999998644 33333 3 4799999999997


Q ss_pred             EEEEEe-cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc
Q psy16020         94 LKSFDA-HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        94 ~~~~~~-h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~  135 (151)
                      ....-+ |+.   .|++|+++++.. ..+++-|..|.+|....-
T Consensus       522 ~~~~w~FHta---kI~~~aWsP~n~~vATGSlDt~Viiysv~kP  562 (603)
T KOG0318|consen  522 KTNRWAFHTA---KINCVAWSPNNKLVATGSLDTNVIIYSVKKP  562 (603)
T ss_pred             ecceeeeeee---eEEEEEeCCCceEEEeccccceEEEEEccCh
Confidence            555444 874   999999998877 888999999999999863

>KOG0278|consensus

Probab=98.24  E-value=4.4e-06  Score=65.69  Aligned_cols=129  Identities=11%  Similarity=0.153  Sum_probs=96.4

Q ss_pred             ceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEEEe-CC
Q psy16020          7 TPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGY-KN   81 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~g~-~n   81 (151)
                      ..|+++..+--|-...+.+  +++..|..+-.|.||+.+.-.    .+  ..+++.+...||..+.. +++ +--+. +.
T Consensus        92 delhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~----Ap--p~E~~ghtg~Ir~v~wc~eD~~iLSSadd~  165 (334)
T KOG0278|consen   92 DELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK----AP--PKEISGHTGGIRTVLWCHEDKCILSSADDK  165 (334)
T ss_pred             hhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCC----CC--chhhcCCCCcceeEEEeccCceEEeeccCC
Confidence            3455555555555555543  468888888889999775211    12  23555556899998885 444 44333 46


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .|+.||..|++..++++-.    ++|+.|.++.+|=.++....+.|+.||+.++++++..+.--
T Consensus       166 tVRLWD~rTgt~v~sL~~~----s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~  225 (334)
T KOG0278|consen  166 TVRLWDHRTGTEVQSLEFN----SPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPC  225 (334)
T ss_pred             ceEEEEeccCcEEEEEecC----CCCcceeeccCCCEEEEecCceeEEeccccccceeeccCcc
Confidence            8999999999999999954    48999999999999999999999999999999999987543

>KOG0641|consensus

Probab=98.19  E-value=0.00013  Score=56.92  Aligned_cols=123  Identities=12%  Similarity=0.187  Sum_probs=89.7

Q ss_pred             CCceeeeEEeC-CeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-----CEEEEEe--C-CeEE
Q psy16020         15 LDTALPPVHVQ-GRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-----NKVWCGY--K-NKIH   84 (151)
Q Consensus        15 ~~~V~~i~~~~-~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-----~~Lw~g~--~-n~I~   84 (151)
                      +.+|+|....+ +++++-.+| -+|.+...+++.. +. ....+++.-+...||-|++.+     +.+-++.  | ++||
T Consensus        89 kgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~-~~-~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy  166 (350)
T KOG0641|consen   89 KGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTC-NA-TGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIY  166 (350)
T ss_pred             CccEEEEEecCccCeEEecCCCceEEEEecccccc-cc-cCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEE
Confidence            36888888764 345544444 5688877765433 21 223345554459999999974     5555544  3 5999


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +-|..+++-.+-+.+|+.   .|..+-.=....++|++.|-+||+||.+--.++..+|
T Consensus       167 ~tdc~~g~~~~a~sghtg---hilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~  221 (350)
T KOG0641|consen  167 ITDCGRGQGFHALSGHTG---HILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLD  221 (350)
T ss_pred             EeecCCCCcceeecCCcc---cEEEEEEecCcEEEccCCCceEEEEeeeccceeeecc
Confidence            999999999999999985   7888766677779999999999999999777777665

>KOG0264|consensus

Probab=98.19  E-value=1.7e-05  Score=65.96  Aligned_cols=100  Identities=20%  Similarity=0.284  Sum_probs=76.2

Q ss_pred             eEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEeCCCCc-EEEEEEec
Q psy16020         27 RVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVDPKSLV-VLKSFDAH  100 (151)
Q Consensus        27 ~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid~~t~~-i~~~~~~h  100 (151)
                      .+|.+-+| |.|.+++...   |..+..+.++-.+  .+|.|+.+..   .-|..|+ +++|.+||++++. ...+|++|
T Consensus       241 ~lF~sv~dd~~L~iwD~R~---~~~~~~~~~~ah~--~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H  315 (422)
T KOG0264|consen  241 DLFGSVGDDGKLMIWDTRS---NTSKPSHSVKAHS--AEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGH  315 (422)
T ss_pred             hhheeecCCCeEEEEEcCC---CCCCCcccccccC--CceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCC
Confidence            57766655 6788888753   3222333334434  9999999973   3466665 5789999999877 88999999


Q ss_pred             CCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020        101 PRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus       101 ~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t  134 (151)
                      .+   .|.++.+++  +.|+.|.+.|+.+.+||...
T Consensus       316 ~d---ev~~V~WSPh~etvLASSg~D~rl~vWDls~  348 (422)
T KOG0264|consen  316 ED---EVFQVEWSPHNETVLASSGTDRRLNVWDLSR  348 (422)
T ss_pred             Cc---ceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence            87   899999995  48899999999999999986

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.17  E-value=0.00058  Score=51.75  Aligned_cols=134  Identities=19%  Similarity=0.166  Sum_probs=87.2

Q ss_pred             CCCCceeeeeeCCCceeee-EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCC---ceEEEeeeCCEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPP-VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHH---SVRSLAAVYNKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i-~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~---pV~~m~~v~~~Lw~   77 (151)
                      ..+.+.+|+..+++.+..- ...++++|++..+|.|..|+... |.    ....+.... +..   +.....+.++.+++
T Consensus        53 ~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~t-G~----~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (238)
T PF13360_consen   53 AKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKT-GK----VLWSIYLTSSPPAGVRSSSSPAVDGDRLYV  127 (238)
T ss_dssp             TTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTT-SC----EEEEEEE-SSCTCSTB--SEEEEETTEEEE
T ss_pred             CCCCCEEEEeeccccccceeeecccccccccceeeeEecccCC-cc----eeeeeccccccccccccccCceEecCEEEE
Confidence            4578899999998765544 77889999999999999998532 31    122221111 111   22334445899999


Q ss_pred             Ee-CCeEEEEeCCCCcEEEEEEecCCCC-Cce-------eEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         78 GY-KNKIHVVDPKSLVVLKSFDAHPRRE-SQV-------RQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        78 g~-~n~I~vid~~t~~i~~~~~~h~~~~-~~I-------~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++ ++.|+.+|++||++.-....+.... ..+       ..+...++.++++......+.+ |.++.+.+.+.+
T Consensus       128 ~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~-d~~tg~~~w~~~  200 (238)
T PF13360_consen  128 GTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGRVVAV-DLATGEKLWSKP  200 (238)
T ss_dssp             EETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSSEEEE-ETTTTEEEEEEC
T ss_pred             EeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCeEEEE-ECCCCCEEEEec
Confidence            99 6799999999999988888754321 111       3444445555655444446777 999998666544

...

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.17  E-value=0.00037  Score=57.76  Aligned_cols=138  Identities=13%  Similarity=0.133  Sum_probs=88.4

Q ss_pred             CCCCCceeeeeeCCCcee-eeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEE
Q psy16020          2 EYPHPTPYPLNKILDTAL-PPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVW   76 (151)
Q Consensus         2 ~~~~~~~l~~i~l~~~V~-~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw   76 (151)
                      +..+.+.+..|.....+. .+.+.+  .++|++..||.|.+++..     +.+....++.|.  .| +++++.  ++.++
T Consensus        22 D~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~-----~~~~v~~i~~G~--~~-~~i~~s~DG~~~~   93 (369)
T PF02239_consen   22 DGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLA-----TGKVVATIKVGG--NP-RGIAVSPDGKYVY   93 (369)
T ss_dssp             ETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETT-----SSSEEEEEE-SS--EE-EEEEE--TTTEEE
T ss_pred             ECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECC-----cccEEEEEecCC--Cc-ceEEEcCCCCEEE
Confidence            345678899998775543 345554  579999999999999975     334556788886  55 667775  46799


Q ss_pred             EEe--CCeEEEEeCCCCcEEEEEEecCC----CCCceeEEEEeCC-EEE-EEEcCCCeEEEEeCCcccee--eeEeCCcc
Q psy16020         77 CGY--KNKIHVVDPKSLVVLKSFDAHPR----RESQVRQMTWAGD-GVW-VSIRLDSTLRMYNAHTYQHL--QDVDIEPY  146 (151)
Q Consensus        77 ~g~--~n~I~vid~~t~~i~~~~~~h~~----~~~~I~~m~~~~~-~vw-is~~~d~~l~lwd~~t~~~l--~~idi~~~  146 (151)
                      +++  .+.+.|+|++|++..+++.....    .++.+..+..+.. .-| ++..+.+.|-+-|....+.+  ..++++.+
T Consensus        94 v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~  173 (369)
T PF02239_consen   94 VANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRF  173 (369)
T ss_dssp             EEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TT
T ss_pred             EEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccccc
Confidence            998  48999999999999999886532    2346777766633 324 57788899988887765543  45655444


Q ss_pred             c
Q psy16020        147 V  147 (151)
Q Consensus       147 v  147 (151)
                      .
T Consensus       174 ~  174 (369)
T PF02239_consen  174 P  174 (369)
T ss_dssp             E
T ss_pred             c
Confidence            3

...

>KOG0293|consensus

Probab=98.17  E-value=9.8e-06  Score=67.36  Aligned_cols=114  Identities=17%  Similarity=0.171  Sum_probs=79.7

Q ss_pred             eeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE------EeCCCCCceEEEeeeCC--EEEEE
Q psy16020          9 YPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV------TLGLPHHSVRSLAAVYN--KVWCG   78 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i------~l~~~~~pV~~m~~v~~--~Lw~g   78 (151)
                      ..-+...++|+++.-.+  ..+.+.|++-.+-.|+..        +.+.+      +.|.  .-||+.---.+  -+.-|
T Consensus       389 r~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~--------e~~lv~kY~Ghkq~~--fiIrSCFgg~~~~fiaSG  458 (519)
T KOG0293|consen  389 RGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLE--------ENKLVRKYFGHKQGH--FIIRSCFGGGNDKFIASG  458 (519)
T ss_pred             hccccccCceeEEEEcCCCcEEEEEcccCeeEEeecc--------hhhHHHHhhcccccc--eEEEeccCCCCcceEEec
Confidence            33455567777776654  357788888777777654        32222      2222  44555443333  35555


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EEEEcCCCeEEEEeCCcc
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~t~  135 (151)
                      +. ++||||+..+++....+.+|+.   .|+|+.+.+..-  +.|+++|++||+|-....
T Consensus       459 SED~kvyIWhr~sgkll~~LsGHs~---~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  459 SEDSKVYIWHRISGKLLAVLSGHSK---TVNCVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             CCCceEEEEEccCCceeEeecCCcc---eeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence            54 6999999999999999999985   899999986654  899999999999987643

>KOG1445|consensus

Probab=98.14  E-value=1.5e-05  Score=69.49  Aligned_cols=129  Identities=15%  Similarity=0.184  Sum_probs=100.4

Q ss_pred             eeeeeCC-CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeCC
Q psy16020          9 YPLNKIL-DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKN   81 (151)
Q Consensus         9 l~~i~l~-~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~n   81 (151)
                      +.-+.-+ |.|.++.|.   ++-+-.+..|-.+.+|....+..-.++.|. +.+|.-+-+|-|+-++   ++-|+.|.++
T Consensus        72 i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape-~~~g~~~~~vE~l~fHpTaDgil~s~a~g  150 (1012)
T KOG1445|consen   72 IGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPE-IDVGGGNVIVECLRFHPTADGILASGAHG  150 (1012)
T ss_pred             cceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcc-eeecCCceEEEEeecccCcCceEEeccCc
Confidence            3444333 789998774   445667788889999998755444554443 4566556899999997   5789999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT-YQHLQDV  141 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t-~~~l~~i  141 (151)
                      .+|++|+.|.+..-++.+|++   .|..+.++.+|- +.+...|-.|++||.++ .+++|..
T Consensus       151 ~v~i~D~stqk~~~el~~h~d---~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~t  209 (1012)
T KOG1445|consen  151 SVYITDISTQKTAVELSGHTD---KVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTT  209 (1012)
T ss_pred             eEEEEEcccCceeecccCCch---hhhccccccCCceEeeecCCcceEEeCCccCCCccccc
Confidence            999999999999999999998   999999998876 55567799999999996 6666654

>KOG0283|consensus

Probab=98.14  E-value=8.1e-05  Score=65.73  Aligned_cols=131  Identities=10%  Similarity=0.087  Sum_probs=100.6

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~   77 (151)
                      ....+||.-...+|-|+|+.+++   ++..-|.-||.+.+|+..        ..+.+.-.+.+.-|+++.+..  .-.-+
T Consensus       397 ~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~--------d~~Vv~W~Dl~~lITAvcy~PdGk~avI  468 (712)
T KOG0283|consen  397 PGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSIS--------DKKVVDWNDLRDLITAVCYSPDGKGAVI  468 (712)
T ss_pred             CCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecC--------cCeeEeehhhhhhheeEEeccCCceEEE
Confidence            35678999999999999999974   578888899999999874        223333344457788888863  34667


Q ss_pred             Ee-CCeEEEEeCCCCcEEEEEEecCCC-----CCceeEEEEeCCEE--EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         78 GY-KNKIHVVDPKSLVVLKSFDAHPRR-----ESQVRQMTWAGDGV--WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        78 g~-~n~I~vid~~t~~i~~~~~~h~~~-----~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |+ .+..++++++.++.+..++.+...     ...|+.+.+.+...  .+-.++|+.||+||.++.+++.++
T Consensus       469 Gt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~Kf  540 (712)
T KOG0283|consen  469 GTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKF  540 (712)
T ss_pred             EEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhh
Confidence            77 678999999999999999876321     23699988884433  668899999999999877766655

>KOG0772|consensus

Probab=98.13  E-value=1.1e-05  Score=68.61  Aligned_cols=106  Identities=21%  Similarity=0.274  Sum_probs=74.6

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE---eCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEE---
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT---LGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKS---   96 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~---l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~---   96 (151)
                      +....+.-||+|.+|+.+...    +..+.|+   -+...-|++..++..  +.+.+||. +.|.+||..+..+--.   
T Consensus       282 ~~FlT~s~DgtlRiWdv~~~k----~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~v  357 (641)
T KOG0772|consen  282 EEFLTCSYDGTLRIWDVNNTK----SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKV  357 (641)
T ss_pred             cceEEecCCCcEEEEecCCch----hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEe
Confidence            346666679999999876321    1223333   233347888888873  44778886 6999999876554333   


Q ss_pred             EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020         97 FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        97 ~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                      -.+|. ..+.|+++.++.+|- ++|.+.|.+|++||.+.++
T Consensus       358 k~AH~-~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  358 KDAHL-PGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             eeccC-CCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence            44675 356899999997765 8999999999999999744

>KOG0267|consensus

Probab=98.12  E-value=7.7e-06  Score=71.69  Aligned_cols=131  Identities=15%  Similarity=0.176  Sum_probs=93.2

Q ss_pred             eeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCC----------------------------------CCCCCCCcc
Q psy16020         11 LNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGP----------------------------------DGQWDLSKY   53 (151)
Q Consensus        11 ~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~----------------------------------~~~wd~~~~   53 (151)
                      ++... .+|-||.+...  -|-+|.++|+|.+|+...                                  -+.||....
T Consensus        65 S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~  144 (825)
T KOG0267|consen   65 SLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK  144 (825)
T ss_pred             eeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhcc
Confidence            44444 46667766433  466778889999998752                                  123554422


Q ss_pred             eEEE-eCCCCCceEEEeeeCCEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEE
Q psy16020         54 HTVT-LGLPHHSVRSLAAVYNKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLR  128 (151)
Q Consensus        54 ~~i~-l~~~~~pV~~m~~v~~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~  128 (151)
                      .... .+.+..-|+++.+..+-=|.+.|   +.+.+||..-|++.++|+.|+-   +|+.+...+..+ ..+++.|.+++
T Consensus       145 Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~---~v~sle~hp~e~Lla~Gs~d~tv~  221 (825)
T KOG0267|consen  145 GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEG---KVQSLEFHPLEVLLAPGSSDRTVR  221 (825)
T ss_pred             CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccc---cccccccCchhhhhccCCCCceee
Confidence            2222 22233668888887655465553   6799999999999999999974   888888877777 77889999999


Q ss_pred             EEeCCccceeeeEeCC
Q psy16020        129 MYNAHTYQHLQDVDIE  144 (151)
Q Consensus       129 lwd~~t~~~l~~idi~  144 (151)
                      +||.+|++.+...+-+
T Consensus       222 f~dletfe~I~s~~~~  237 (825)
T KOG0267|consen  222 FWDLETFEVISSGKPE  237 (825)
T ss_pred             eeccceeEEeeccCCc
Confidence            9999999998777543

>KOG2106|consensus

Probab=98.11  E-value=8.8e-05  Score=63.10  Aligned_cols=129  Identities=12%  Similarity=0.136  Sum_probs=97.2

Q ss_pred             eeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCe
Q psy16020          8 PYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNK   82 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~   82 (151)
                      .+..++-. +.|+.-.+++  ..+.+..+.|.+..|.+..++.-  +.+..++-.+ ++-|.||.+.+ +.+-.|- ++.
T Consensus       192 ~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~--k~~~~fek~e-kk~Vl~v~F~engdviTgDS~G~  268 (626)
T KOG2106|consen  192 KLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLV--KRQGIFEKRE-KKFVLCVTFLENGDVITGDSGGN  268 (626)
T ss_pred             ccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceE--EEeecccccc-ceEEEEEEEcCCCCEEeecCCce
Confidence            34455533 5666666664  36889999999999988643310  1112222222 47899999975 5677775 679


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |+||+..+-++.++..+|.   ..|.++...++|-++|+++|..|.+|| ..++.++++.+
T Consensus       269 i~Iw~~~~~~~~k~~~aH~---ggv~~L~~lr~GtllSGgKDRki~~Wd-~~y~k~r~~el  325 (626)
T KOG2106|consen  269 ILIWSKGTNRISKQVHAHD---GGVFSLCMLRDGTLLSGGKDRKIILWD-DNYRKLRETEL  325 (626)
T ss_pred             EEEEeCCCceEEeEeeecC---CceEEEEEecCccEeecCccceEEecc-ccccccccccC
Confidence            9999999999999888996   489999999999999999999999999 66888888864

>KOG0268|consensus

Probab=98.11  E-value=2.9e-05  Score=63.69  Aligned_cols=132  Identities=13%  Similarity=0.091  Sum_probs=99.4

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK   80 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~   80 (151)
                      .+...|++.++-. ..|..|.+..+..|....|-+|..|...  |     +|...=+|.  ..+.-+.... +.+++.||
T Consensus        96 lsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~--~-----~p~~tilg~--s~~~gIdh~~~~~~FaTcG  166 (433)
T KOG0268|consen   96 LSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKID--G-----PPLHTILGK--SVYLGIDHHRKNSVFATCG  166 (433)
T ss_pred             hhhhhhhheeecccCceeeEEecccceEEecCCcceeeeecc--C-----Ccceeeecc--ccccccccccccccccccC
Confidence            3556778888877 4888888887777777767788887653  2     122323343  4444444443 66899999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      -+|.|||..-...+++++-..|   .|.++.+.  ...++.+++.|..|.|||.++.++++++-+.-.
T Consensus       167 e~i~IWD~~R~~Pv~smswG~D---ti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mR  231 (433)
T KOG0268|consen  167 EQIDIWDEQRDNPVSSMSWGAD---SISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMR  231 (433)
T ss_pred             ceeeecccccCCccceeecCCC---ceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeecc
Confidence            9999999998889999987766   78888887  457799999999999999999999998865443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.11  E-value=0.00019  Score=58.75  Aligned_cols=132  Identities=11%  Similarity=-0.024  Sum_probs=87.6

Q ss_pred             CCCCceeeeeeCCCce-eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC
Q psy16020          3 YPHPTPYPLNKILDTA-LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK   80 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V-~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~   80 (151)
                      ..+.+.+|+.++++.+ -.....++++|++..+|.|..|+...+. .|...      ++.  .......+.++.++++++
T Consensus        82 ~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~------~~~--~~~~~p~v~~~~v~v~~~  153 (377)
T TIGR03300        82 AETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAK------LSS--EVLSPPLVANGLVVVRTN  153 (377)
T ss_pred             ccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeec------cCc--eeecCCEEECCEEEEECC
Confidence            4577899999998643 3455678899999999999999974322 46433      222  111122335788999885


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCC--CceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRE--SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~--~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                       +.|+.+|+++++..-+++......  .........++ ..+....++.+..+|.++++.+.+.++
T Consensus       154 ~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~-~v~~~~~~g~v~ald~~tG~~~W~~~~  218 (377)
T TIGR03300       154 DGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADG-GVLVGFAGGKLVALDLQTGQPLWEQRV  218 (377)
T ss_pred             CCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECC-EEEEECCCCEEEEEEccCCCEeeeecc
Confidence             689999999999877766443210  00112233344 445677788999999999988766543

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.10  E-value=0.00025  Score=58.84  Aligned_cols=107  Identities=15%  Similarity=0.175  Sum_probs=74.2

Q ss_pred             CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEE-Eeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020         26 GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        26 ~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~-m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h  100 (151)
                      |..||.. .+|+|+|++-.     ..+....++.+.  .+ .. +.+.  +..+|+++. +.|.+||+.++++.+++.+.
T Consensus         6 ~l~~V~~~~~~~v~viD~~-----t~~~~~~i~~~~--~~-h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G   77 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGA-----TNKVVARIPTGG--AP-HAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG   77 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETT-----T-SEEEEEE-ST--TE-EEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S
T ss_pred             cEEEEEecCCCEEEEEECC-----CCeEEEEEcCCC--Cc-eeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC
Confidence            3455655 47999999864     223445677664  44 33 3333  367999885 69999999999999999976


Q ss_pred             CCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020        101 PRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       101 ~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .    ....++.+  |..++++...++.+.++|++|+|+++.|...
T Consensus        78 ~----~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~  119 (369)
T PF02239_consen   78 G----NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTG  119 (369)
T ss_dssp             S----EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred             C----CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccc
Confidence            4    45667776  4557788888999999999999999999754

...

>KOG2445|consensus

Probab=98.09  E-value=0.00011  Score=59.23  Aligned_cols=142  Identities=17%  Similarity=0.221  Sum_probs=99.5

Q ss_pred             CCCCCCceeeeee--------CCCceeeeEEeCC----eEEEEecCC------cEEEEEcCCCC-CCCCCcceEEEeCCC
Q psy16020          1 MEYPHPTPYPLNK--------ILDTALPPVHVQG----RVVCALADG------SVAIFRRGPDG-QWDLSKYHTVTLGLP   61 (151)
Q Consensus         1 ~~~~~~~~l~~i~--------l~~~V~~i~~~~~----~v~vgl~nG------~l~v~~~~~~~-~wd~~~~~~i~l~~~   61 (151)
                      ||.+.++..++|+        -..+-+|+...+.    ..++-.+|-      .+.+|++++++ .|-    +.-+|.+.
T Consensus       147 ~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~----kva~L~d~  222 (361)
T KOG2445|consen  147 MNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWL----KVAELPDH  222 (361)
T ss_pred             cccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceee----eehhcCCC
Confidence            5667788888887        4457788877644    355555565      89999998777 452    22245566


Q ss_pred             CCceEEEeeeC------CEEEEEeCCeEEEEeCCC------------------CcEE--EEEEecCCCCCceeEEEEeCC
Q psy16020         62 HHSVRSLAAVY------NKVWCGYKNKIHVVDPKS------------------LVVL--KSFDAHPRRESQVRQMTWAGD  115 (151)
Q Consensus        62 ~~pV~~m~~v~------~~Lw~g~~n~I~vid~~t------------------~~i~--~~~~~h~~~~~~I~~m~~~~~  115 (151)
                      ..||+.+....      -.|.+||++-|+||+.+.                  ++++  ..|..|.   .+|=.|.+.-.
T Consensus       223 ~dpI~di~wAPn~Gr~y~~lAvA~kDgv~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~---~~VWrv~wNmt  299 (361)
T KOG2445|consen  223 TDPIRDISWAPNIGRSYHLLAVATKDGVRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHN---GEVWRVRWNMT  299 (361)
T ss_pred             CCcceeeeeccccCCceeeEEEeecCcEEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCC---CceEEEEEeee
Confidence            79999999963      248899976688888763                  2222  2344443   47888877733


Q ss_pred             -EEEEEEcCCCeEEEEeCC---ccceeeeEeCCccccc
Q psy16020        116 -GVWVSIRLDSTLRMYNAH---TYQHLQDVDIEPYVSK  149 (151)
Q Consensus       116 -~vwis~~~d~~l~lwd~~---t~~~l~~idi~~~v~~  149 (151)
                       .++.|.+.||.||||.+.   .++++..+..++++.|
T Consensus       300 GtiLsStGdDG~VRLWkany~n~~kC~sv~~~e~~~~~  337 (361)
T KOG2445|consen  300 GTILSSTGDDGCVRLWKANYNNLWKCTSVLKAEGSVTK  337 (361)
T ss_pred             eeEEeecCCCceeeehhhhhhhhheeeeEEeccCCCCC
Confidence             458999999999999986   4677777877777654

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.08  E-value=0.0002  Score=59.25  Aligned_cols=137  Identities=12%  Similarity=0.059  Sum_probs=89.8

Q ss_pred             CCCceeeeeeCCCcee------eeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCC--Cce-EEEeeeCC
Q psy16020          4 PHPTPYPLNKILDTAL------PPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSV-RSLAAVYN   73 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~------~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~--~pV-~~m~~v~~   73 (151)
                      ..++.+|+.++.+.+-      .-...+++||++..+|.|..|+...+. .|..+....-......  ..+ ...+..++
T Consensus        42 ~~~~~~W~~~~g~g~~~~~~~~sPvv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~  121 (394)
T PRK11138         42 FTPTTVWSTSVGDGVGDYYSRLHPAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGG  121 (394)
T ss_pred             CCcceeeEEEcCCCCccceeeeccEEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECC
Confidence            3567788988876542      345578999999999999999975432 4755433211110000  011 12455689


Q ss_pred             EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         74 KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        74 ~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +|++++. +.++.+|++|+++.=+......   ....-...++.|+ ....++.|..+|.+|++.+-..+..
T Consensus       122 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~---~~ssP~v~~~~v~-v~~~~g~l~ald~~tG~~~W~~~~~  189 (394)
T PRK11138        122 KVYIGSEKGQVYALNAEDGEVAWQTKVAGE---ALSRPVVSDGLVL-VHTSNGMLQALNESDGAVKWTVNLD  189 (394)
T ss_pred             EEEEEcCCCEEEEEECCCCCCcccccCCCc---eecCCEEECCEEE-EECCCCEEEEEEccCCCEeeeecCC
Confidence            9999986 5899999999998776664421   1111122344444 5667889999999999999887653

>KOG0269|consensus

Probab=98.06  E-value=3e-05  Score=68.46  Aligned_cols=123  Identities=15%  Similarity=0.155  Sum_probs=92.6

Q ss_pred             ceeeeEE---eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeC-CeEEEEeCC
Q psy16020         17 TALPPVH---VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        17 ~V~~i~~---~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~-n~I~vid~~   89 (151)
                      +|.++.+   .++.|..|..||+|-.|+...+..     ... --+. .++||-+.+.   +++...+.+ +.+..||++
T Consensus       135 s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S-----~~t-~~~n-SESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR  207 (839)
T KOG0269|consen  135 SANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS-----KST-FRSN-SESIRDVKFSPGYGNKFASIHDSGYLQLWDLR  207 (839)
T ss_pred             ceeeeeeccCCccEEEecCCCceEEEEeeecccc-----ccc-cccc-chhhhceeeccCCCceEEEecCCceEEEeecc
Confidence            6667766   467899999999999998864321     111 1122 2888888886   366777776 589999987


Q ss_pred             -CCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCc--cceeeeEeCCccccc
Q psy16020         90 -SLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHT--YQHLQDVDIEPYVSK  149 (151)
Q Consensus        90 -t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t--~~~l~~idi~~~v~~  149 (151)
                       .-+.++.|.||.   ++|.|+.+.+++.| .+++||..+++||..+  ..++..|+.-.+|.+
T Consensus       208 qp~r~~~k~~AH~---GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~r  268 (839)
T KOG0269|consen  208 QPDRCEKKLTAHN---GPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGR  268 (839)
T ss_pred             CchhHHHHhhccc---CceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeee
Confidence             677999999997   49999999999886 5788999999999985  555666665555554

>KOG0288|consensus

Probab=98.05  E-value=0.00013  Score=60.72  Aligned_cols=129  Identities=16%  Similarity=0.152  Sum_probs=97.3

Q ss_pred             CCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEE-cCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEE-EEeC
Q psy16020          5 HPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFR-RGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVW-CGYK   80 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~-~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw-~g~~   80 (151)
                      ...|.+++-..+.+++|+..+--++-|--|++|..|+ |.+      +....+++|   .-|+++.+.-  .+|- ++-+
T Consensus       292 k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~------~~~~sv~~g---g~vtSl~ls~~g~~lLsssRD  362 (459)
T KOG0288|consen  292 KAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSA------DKTRSVPLG---GRVTSLDLSMDGLELLSSSRD  362 (459)
T ss_pred             hhheeccccccccccceEecceeeeecccccceEEEeccCC------ceeeEeecC---cceeeEeeccCCeEEeeecCC
Confidence            3456777766689999998877889999999999998 432      223455665   5888988863  3443 4446


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCC-ceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRES-QVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~-~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |.+.+||..+.++..+|.+-..... -.+..++++++- ..+++-|+.|++|++.|.++-..+.
T Consensus       363 dtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~  426 (459)
T KOG0288|consen  363 DTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLS  426 (459)
T ss_pred             CceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEec
Confidence            8999999999999999987643322 388888887766 5678889999999999988776654

>KOG2055|consensus

Probab=98.04  E-value=6.3e-05  Score=63.19  Aligned_cols=126  Identities=15%  Similarity=0.147  Sum_probs=92.9

Q ss_pred             CceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EEEEEeCC-eEEEEeCC
Q psy16020         16 DTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWCGYKN-KIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~g~~n-~I~vid~~   89 (151)
                      ..|.++.++++.  +.+|.-||++.+|..+  |.-+. ..+.+.+..  .||.|..+..  . .+..+... -.|+||.+
T Consensus       214 ~~I~sv~FHp~~plllvaG~d~~lrifqvD--Gk~N~-~lqS~~l~~--fPi~~a~f~p~G~~~i~~s~rrky~ysyDle  288 (514)
T KOG2055|consen  214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVD--GKVNP-KLQSIHLEK--FPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE  288 (514)
T ss_pred             CCceEEEecCCCceEEEecCCCcEEEEEec--CccCh-hheeeeecc--CccceeeecCCCceEEEecccceEEEEeecc
Confidence            479999999875  8888889999999975  43222 234556665  9999999973  3 35555444 59999999


Q ss_pred             CCcEEEE--EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         90 SLVVLKS--FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        90 t~~i~~~--~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                      +.++.+-  ..+++  ...+...+++.++- .+..++.+.|.|-|+.|.+++..+-++-.|+
T Consensus       289 ~ak~~k~~~~~g~e--~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~  348 (514)
T KOG2055|consen  289 TAKVTKLKPPYGVE--EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVS  348 (514)
T ss_pred             ccccccccCCCCcc--cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEe
Confidence            9987654  33443  45677777775544 5567889999999999999999998776654

>KOG0283|consensus

Probab=98.03  E-value=0.0001  Score=65.09  Aligned_cols=117  Identities=15%  Similarity=0.186  Sum_probs=87.8

Q ss_pred             eCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcc--eEEEeCCC----CCceEEEeee---CCEEEEEe-C
Q psy16020         13 KILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKY--HTVTLGLP----HHSVRSLAAV---YNKVWCGY-K   80 (151)
Q Consensus        13 ~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~--~~i~l~~~----~~pV~~m~~v---~~~Lw~g~-~   80 (151)
                      -|++-|++++|.+  +.++||.=+|...+|+..     +++..  ..|.+...    ...|+.+.+.   .++|-+.+ +
T Consensus       449 Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~-----~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnD  523 (712)
T KOG0283|consen  449 DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTE-----GLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSND  523 (712)
T ss_pred             hhhhhheeEEeccCCceEEEEEeccEEEEEEcc-----CCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCC
Confidence            4678999999975  479999999999999865     22222  23344321    1468888886   26677666 5


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~  135 (151)
                      .+|.|||.++.+++..|.++.+..+++.+=-.. +|- .+++++|..|++|+....
T Consensus       524 SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~-Dgk~IVs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  524 SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSS-DGKHIVSASEDSWVYIWKNDSF  578 (712)
T ss_pred             CceEEEeccchhhhhhhcccccCCcceeeeEcc-CCCEEEEeecCceEEEEeCCCC
Confidence            799999999999999999988888888774443 444 779999999999997543

>KOG1539|consensus

Probab=98.03  E-value=0.00045  Score=61.69  Aligned_cols=123  Identities=13%  Similarity=0.201  Sum_probs=94.7

Q ss_pred             eeeeeCCCc-eeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020          9 YPLNKILDT-ALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY--NKVWCGYK-   80 (151)
Q Consensus         9 l~~i~l~~~-V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~--~~Lw~g~~-   80 (151)
                      +.-.+.... |.+|.|-   =|++.+|...|.+.+|....        -+.+ +.......|+++....  |-+.+|+. 
T Consensus       152 ~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt--------~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~  223 (910)
T KOG1539|consen  152 STFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRT--------GKVVYTFQEFFSRITAIEQSPALDVVAIGLEN  223 (910)
T ss_pred             ceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEecc--------CcEEEEecccccceeEeccCCcceEEEEeccC
Confidence            334445533 8888874   36899999999999997753        2222 3333348888888865  88999997 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++|.++|.+..++..+|+ |..  .+|+.+.+.  |..+..+++..|.+-+||.+..++...+.
T Consensus       224 G~ViifNlK~dkil~sFk-~d~--g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~  284 (910)
T KOG1539|consen  224 GTVIIFNLKFDKILMSFK-QDW--GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTR  284 (910)
T ss_pred             ceEEEEEcccCcEEEEEE-ccc--cceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeee
Confidence            599999999999999999 532  599999998  77778888888999999999766665554

>KOG0640|consensus

Probab=98.02  E-value=7.3e-05  Score=60.49  Aligned_cols=117  Identities=13%  Similarity=0.187  Sum_probs=92.0

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeC---CCCCceEEEeeeC-CEEEEE-e-CCeEEEE
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLG---LPHHSVRSLAAVY-NKVWCG-Y-KNKIHVV   86 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~---~~~~pV~~m~~v~-~~Lw~g-~-~n~I~vi   86 (151)
                      .+|.+|.+++  .++.+|..--++.+|+.+.        .+.+ .-.   .+...|+++-+.. +.||+. + ++.|.+|
T Consensus       217 ~~vrsiSfHPsGefllvgTdHp~~rlYdv~T--------~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Iklw  288 (430)
T KOG0640|consen  217 EPVRSISFHPSGEFLLVGTDHPTLRLYDVNT--------YQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLW  288 (430)
T ss_pred             ceeeeEeecCCCceEEEecCCCceeEEeccc--------eeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEee
Confidence            4889998875  5899999888999998752        2222 211   1347899998875 678854 3 5799999


Q ss_pred             eCCCCcEEEEEE-ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         87 DPKSLVVLKSFD-AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        87 d~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |--+.++.++|. +|  ..+.|...++..+|- .+|-+.|++++||...|++.+++.-
T Consensus       289 DGVS~rCv~t~~~AH--~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Yt  344 (430)
T KOG0640|consen  289 DGVSNRCVRTIGNAH--GGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYT  344 (430)
T ss_pred             ccccHHHHHHHHhhc--CCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEe
Confidence            999999999987 45  357899999997776 6788899999999999999998874

>KOG0973|consensus

Probab=98.02  E-value=6.2e-05  Score=68.12  Aligned_cols=124  Identities=18%  Similarity=0.268  Sum_probs=90.7

Q ss_pred             CceeeeEEeCC-eEEEE-e--cCCcEEEEEcCC----CCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEeCCe-E
Q psy16020         16 DTALPPVHVQG-RVVCA-L--ADGSVAIFRRGP----DGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGYKNK-I   83 (151)
Q Consensus        16 ~~V~~i~~~~~-~v~vg-l--~nG~l~v~~~~~----~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~~n~-I   83 (151)
                      .+|++|--+++ ..|+. +  .||.+.||+...    ...||...|+.+ +..++..+|+|.-+.  +..|+.|++++ |
T Consensus        14 ~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v   93 (942)
T KOG0973|consen   14 KSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLV   93 (942)
T ss_pred             eeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceE
Confidence            46888866654 33443 3  467788998763    223555434443 455566999999776  35688888875 6


Q ss_pred             EEEeCC------------------CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         84 HVVDPK------------------SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        84 ~vid~~------------------t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .||.-.                  ..+....+.+|+.   -|..+++++++. ++|++.|++|.+|+.+||+++..++
T Consensus        94 ~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~---DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~  168 (942)
T KOG0973|consen   94 MIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDS---DVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLR  168 (942)
T ss_pred             EEeeecccCCcccccccccccccceeeEEEEEecCCC---ccceeccCCCccEEEEecccceEEEEccccceeeeeee
Confidence            777654                  2347788899964   799999998877 8999999999999999999998885

>KOG1332|consensus

Probab=98.02  E-value=1.9e-05  Score=61.93  Aligned_cols=116  Identities=21%  Similarity=0.338  Sum_probs=79.5

Q ss_pred             CCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcc-eEEEeCC-----CCCceEE------EeeeCCEE-EE
Q psy16020         15 LDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKY-HTVTLGL-----PHHSVRS------LAAVYNKV-WC   77 (151)
Q Consensus        15 ~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~-~~i~l~~-----~~~pV~~------m~~v~~~L-w~   77 (151)
                      ..+|.++.+.+.    .|++|.+||+|.|++.+++|.|+.+.. ..-++|-     .+..+.-      ++---.+| =.
T Consensus       102 ~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSg  181 (299)
T KOG1332|consen  102 SASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSG  181 (299)
T ss_pred             cccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeecc
Confidence            468999988765    499999999999999999888976432 1112221     0010000      00001233 35


Q ss_pred             EeCCeEEEEeCCC--CcEEEEEEecCCCCCceeEEEEeCC-----EEEEEEcCCCeEEEEeCC
Q psy16020         78 GYKNKIHVVDPKS--LVVLKSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        78 g~~n~I~vid~~t--~~i~~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d~~l~lwd~~  133 (151)
                      ||+|.|.||+-++  .+.+++|++|+|   -|+.++..+.     .-..|++.|+++.+|-.+
T Consensus       182 GcDn~VkiW~~~~~~w~~e~~l~~H~d---wVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~  241 (299)
T KOG1332|consen  182 GCDNLVKIWKFDSDSWKLERTLEGHKD---WVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD  241 (299)
T ss_pred             CCccceeeeecCCcchhhhhhhhhcch---hhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence            7889899987665  568888999998   7777777744     237899999999999776

>KOG1188|consensus

Probab=98.01  E-value=5.2e-05  Score=61.63  Aligned_cols=136  Identities=14%  Similarity=0.168  Sum_probs=96.2

Q ss_pred             CceeeeeeCC-CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee--CCEEEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV--YNKVWC   77 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v--~~~Lw~   77 (151)
                      .+.+..++-+ +.+..+.+..    .-|+.+..||+|..|+....+     ....+.-. .+..|-.|+...  ++.+.|
T Consensus        60 g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~-----e~a~~~~~~~~~~~f~~ld~nck~~ii~~  134 (376)
T KOG1188|consen   60 GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQA-----ESARISWTQQSGTPFICLDLNCKKNIIAC  134 (376)
T ss_pred             hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecch-----hhhheeccCCCCCcceEeeccCcCCeEEe
Confidence            4566777744 6666666643    479999999999999876332     11223332 223789999995  456778


Q ss_pred             EeC----C-eEEEEeCCCCcE-EEE-EEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc----cceeeeEeCC
Q psy16020         78 GYK----N-KIHVVDPKSLVV-LKS-FDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT----YQHLQDVDIE  144 (151)
Q Consensus        78 g~~----n-~I~vid~~t~~i-~~~-~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t----~~~l~~idi~  144 (151)
                      |..    + .++.||.+.-+- .+. ++.|.|   -|+++.+-++  ..++|++-|+.+.|||+..    --+++.||..
T Consensus       135 GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~D---DVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~  211 (376)
T KOG1188|consen  135 GTELTRSDASVVLWDVRSEQQLLRQLNESHND---DVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHG  211 (376)
T ss_pred             ccccccCceEEEEEEeccccchhhhhhhhccC---cceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhccc
Confidence            873    3 699999987664 555 667877   7888888855  4599999999999999984    3356667766


Q ss_pred             ccccc
Q psy16020        145 PYVSK  149 (151)
Q Consensus       145 ~~v~~  149 (151)
                      ..+++
T Consensus       212 sSI~~  216 (376)
T KOG1188|consen  212 SSIHL  216 (376)
T ss_pred             ceeee
Confidence            66554

>KOG0645|consensus

Probab=98.00  E-value=0.00067  Score=53.90  Aligned_cols=120  Identities=15%  Similarity=0.278  Sum_probs=88.4

Q ss_pred             CceeeeEEeCCe---EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCC
Q psy16020         16 DTALPPVHVQGR---VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~~---v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~   89 (151)
                      +.+-.+..+++.   ++.+..|-.|.+|+..+...|.+.   .+-=..++..||+++..  +..|.+|+ +..+.||.-.
T Consensus        15 ~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck---~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~   91 (312)
T KOG0645|consen   15 DRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCK---TVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKE   91 (312)
T ss_pred             CcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEE---EeccccchheeeeeeecCCCcEEEEeeccceEEEeecC
Confidence            567777787773   666677778999998753345332   21112467999999994  56677777 5678788655


Q ss_pred             --CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc---cceeeeE
Q psy16020         90 --SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT---YQHLQDV  141 (151)
Q Consensus        90 --t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t---~~~l~~i  141 (151)
                        ++++..++|+|.+   .|.+++++.+|- +.+++||-.+=+|.+..   |++..-+
T Consensus        92 ~~efecv~~lEGHEn---EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL  146 (312)
T KOG0645|consen   92 DGEFECVATLEGHEN---EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVL  146 (312)
T ss_pred             CCceeEEeeeecccc---ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeee
Confidence              4678899999986   899999997765 89999999999999873   5554444

>KOG0299|consensus

Probab=97.99  E-value=4.1e-05  Score=64.14  Aligned_cols=118  Identities=14%  Similarity=0.189  Sum_probs=83.2

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCC----CCCCCcc---eE--EEeC--CCCCceEEEeeeCCEEEEEe---
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDG----QWDLSKY---HT--VTLG--LPHHSVRSLAAVYNKVWCGY---   79 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~----~wd~~~~---~~--i~l~--~~~~pV~~m~~v~~~Lw~g~---   79 (151)
                      -+|.|+...++  ++|-+.-||+|.-|....+.    .|.-+..   +.  ++.+  .+..-+-||++..+.=|.+.   
T Consensus       143 ~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~  222 (479)
T KOG0299|consen  143 LSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGR  222 (479)
T ss_pred             CcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCC
Confidence            47888877765  89999999999988764322    3322100   11  1112  22355677777654333333   


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccc
Q psy16020         80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      ++.|.|||++|++..+.|.+|.+   .|.++++- |..-++|++.|..+++|+.....
T Consensus       223 d~~v~Iw~~~t~ehv~~~~ghr~---~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s  277 (479)
T KOG0299|consen  223 DRHVQIWDCDTLEHVKVFKGHRG---AVSSLAFRKGTSELYSASADRSVKVWSIDQLS  277 (479)
T ss_pred             CceEEEecCcccchhhccccccc---ceeeeeeecCccceeeeecCCceEEEehhHhH
Confidence            35799999999999999999976   89888887 44448899999999999988543

>KOG1408|consensus

Probab=97.99  E-value=2.3e-05  Score=69.01  Aligned_cols=138  Identities=17%  Similarity=0.189  Sum_probs=95.4

Q ss_pred             CCCCceeeeee-CCCce---eeeEEeCCeEEEEecCCcEEEEEcCC----------------------CCC----CCCCc
Q psy16020          3 YPHPTPYPLNK-ILDTA---LPPVHVQGRVVCALADGSVAIFRRGP----------------------DGQ----WDLSK   52 (151)
Q Consensus         3 ~~~~~~l~~i~-l~~~V---~~i~~~~~~v~vgl~nG~l~v~~~~~----------------------~~~----wd~~~   52 (151)
                      ..|-+|+|.++ +|=.|   ..-+--++......+||+|.+|+...                      ++.    -|.+.
T Consensus       366 lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~  445 (1080)
T KOG1408|consen  366 LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASA  445 (1080)
T ss_pred             eeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccC
Confidence            35778999986 55111   11122244556677799999997752                      000    00000


Q ss_pred             c----eEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe----CCEEEEEE
Q psy16020         53 Y----HTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA----GDGVWVSI  121 (151)
Q Consensus        53 ~----~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~----~~~vwis~  121 (151)
                      +    ......++.--+||+.+..  .+|..|- +++++|+|+.+++....+++|.   +.|.|+.++    +..++.|+
T Consensus       446 ~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHe---sEilcLeyS~p~~~~kLLASa  522 (1080)
T KOG1408|consen  446 GIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHE---SEILCLEYSFPVLTNKLLASA  522 (1080)
T ss_pred             CcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheeccc---ceeEEEeecCchhhhHhhhhc
Confidence            0    0112223456789999975  4577665 4799999999999999999996   489999999    44669999


Q ss_pred             cCCCeEEEEeCCc-cceeeeEeC
Q psy16020        122 RLDSTLRMYNAHT-YQHLQDVDI  143 (151)
Q Consensus       122 ~~d~~l~lwd~~t-~~~l~~idi  143 (151)
                      ++|..|.+||+.. |.++|.+|=
T Consensus       523 srdRlIHV~Dv~rny~l~qtld~  545 (1080)
T KOG1408|consen  523 SRDRLIHVYDVKRNYDLVQTLDG  545 (1080)
T ss_pred             cCCceEEEEecccccchhhhhcc
Confidence            9999999999975 999998873

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=97.98  E-value=3.8e-05  Score=42.48  Aligned_cols=38  Identities=21%  Similarity=0.500  Sum_probs=33.8

Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEe
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYN  131 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd  131 (151)
                      ++++++|.+|+.   .|++|.+.++ ..++|++.|+.|++||
T Consensus         1 g~~~~~~~~h~~---~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSS---SINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSS---SEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCC---cEEEEEEecccccceeeCCCCEEEEEC
Confidence            467899999975   9999999977 5689999999999998

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0300|consensus

Probab=97.98  E-value=0.00012  Score=59.58  Aligned_cols=131  Identities=13%  Similarity=0.121  Sum_probs=82.7

Q ss_pred             CceeeeEEeCCe--EEEEecCCcEEEEEcC------C----------------CC-CCCCC------cce----EEEeCC
Q psy16020         16 DTALPPVHVQGR--VVCALADGSVAIFRRG------P----------------DG-QWDLS------KYH----TVTLGL   60 (151)
Q Consensus        16 ~~V~~i~~~~~~--v~vgl~nG~l~v~~~~------~----------------~~-~wd~~------~~~----~i~l~~   60 (151)
                      .+|.||++++..  +..|.+|++--+|...      .                |. .-|.+      .+.    ...+-.
T Consensus       191 GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltg  270 (481)
T KOG0300|consen  191 GSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTG  270 (481)
T ss_pred             cceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeec
Confidence            699999998765  5556666677777522      0                00 00110      000    112222


Q ss_pred             CCCceEEEee-e-CCEEEEEeCC-eEEEEeCCCCcEEEEEEe--------------------------------------
Q psy16020         61 PHHSVRSLAA-V-YNKVWCGYKN-KIHVVDPKSLVVLKSFDA--------------------------------------   99 (151)
Q Consensus        61 ~~~pV~~m~~-v-~~~Lw~g~~n-~I~vid~~t~~i~~~~~~--------------------------------------   99 (151)
                      +..+|-|..- + ++++-.|+++ .-.+||.+|+++.+.+.+                                      
T Consensus       271 H~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV  350 (481)
T KOG0300|consen  271 HRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSV  350 (481)
T ss_pred             cccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhccee
Confidence            3455554443 2 3567777765 467888888887765554                                      


Q ss_pred             -----cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc-cceeeeEeCCccccc
Q psy16020        100 -----HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEPYVSK  149 (151)
Q Consensus       100 -----h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t-~~~l~~idi~~~v~~  149 (151)
                           |++   .|+..++.-+.-.+|+++|.+|++||.+. ..++..|....++++
T Consensus       351 ~VFQGHtd---tVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NR  403 (481)
T KOG0300|consen  351 AVFQGHTD---TVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANR  403 (481)
T ss_pred             eeeccccc---ceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecCCccce
Confidence                 443   56666666555567999999999999987 778888887777665

>KOG1332|consensus

Probab=97.96  E-value=8.2e-05  Score=58.37  Aligned_cols=108  Identities=18%  Similarity=0.245  Sum_probs=81.6

Q ss_pred             EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe--CCeEEEEeCCCCcEEEE
Q psy16020         22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY--KNKIHVVDPKSLVVLKS   96 (151)
Q Consensus        22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~--~n~I~vid~~t~~i~~~   96 (151)
                      -|.+.++-.+.+||+|.||...+.++    .....+|-.+..||-.++...   +.+-++|  +++|.||.-++++-.+.
T Consensus        20 DyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~   95 (299)
T KOG1332|consen   20 DYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKA   95 (299)
T ss_pred             hhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhh
Confidence            46788999999999999999876553    334557776779999999864   5555555  78999999888864443


Q ss_pred             EEecCCCCCceeEEEEeCC--EE-EEEEcCCCeEEEEeCCc
Q psy16020         97 FDAHPRRESQVRQMTWAGD--GV-WVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        97 ~~~h~~~~~~I~~m~~~~~--~v-wis~~~d~~l~lwd~~t  134 (151)
                      .+ |+.-+.+|+++...+.  |. +.+++.|+.|.+.+.++
T Consensus        96 ~e-~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~  135 (299)
T KOG1332|consen   96 YE-HAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDS  135 (299)
T ss_pred             hh-hhhhcccceeecccccccceEEEEeeCCCcEEEEEEcC
Confidence            33 3333469999998855  44 78889999999988775

>KOG0302|consensus

Probab=97.95  E-value=0.00017  Score=59.50  Aligned_cols=111  Identities=14%  Similarity=0.223  Sum_probs=82.3

Q ss_pred             CceeeeEE---eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEeC-CeEEEEeCC
Q psy16020         16 DTALPPVH---VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGYK-NKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~---~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~~-n~I~vid~~   89 (151)
                      ++|-+|.+   ..+-++.+..||+|.||+..++..    .+.. ..-.++.-|+.+..+.+.  |..|.+ +.+.|||++
T Consensus       258 ~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~----~~~~-~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR  332 (440)
T KOG0302|consen  258 KSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPK----KAAV-STKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR  332 (440)
T ss_pred             cchhhhccCCccCceEEeeecCceEEEEEecCCCc----ccee-EeeccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence            68888888   344566677899999999865321    2222 223344788888887643  444444 589999998


Q ss_pred             CCc---EEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020         90 SLV---VLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        90 t~~---i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t  134 (151)
                      +++   ...+|.-|..   +|+++.+.  .+.+..+.+.|.+|.+||...
T Consensus       333 ~~~~~~pVA~fk~Hk~---pItsieW~p~e~s~iaasg~D~QitiWDlsv  379 (440)
T KOG0302|consen  333 QFKSGQPVATFKYHKA---PITSIEWHPHEDSVIAASGEDNQITIWDLSV  379 (440)
T ss_pred             hccCCCcceeEEeccC---CeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence            655   6678998875   99999998  468899999999999999874

>KOG0289|consensus

Probab=97.95  E-value=0.00019  Score=60.02  Aligned_cols=132  Identities=11%  Similarity=0.061  Sum_probs=95.4

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCE-EEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNK-VWC   77 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~-Lw~   77 (151)
                      ++-+.|..++=. -.|++..+++.  .++.|.+|-.|.||+..     +.+.+..+...  ++||+.+...  ++. ||+
T Consensus       249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~-----~~s~~~~~~~h--~~~V~~ls~h~tgeYllsA  321 (506)
T KOG0289|consen  249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVP-----LSSEPTSSRPH--EEPVTGLSLHPTGEYLLSA  321 (506)
T ss_pred             chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccc-----cccCccccccc--cccceeeeeccCCcEEEEe
Confidence            444444444433 47888888776  48999999999999864     22344444443  4999999986  344 677


Q ss_pred             EeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         78 GYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        78 g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      ..++..---|.+++........- -++..+++.++-++|. +.++..|+.|++||..+..-+..+..
T Consensus       322 s~d~~w~Fsd~~~g~~lt~vs~~-~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpg  387 (506)
T KOG0289|consen  322 SNDGTWAFSDISSGSQLTVVSDE-TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG  387 (506)
T ss_pred             cCCceEEEEEccCCcEEEEEeec-cccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCC
Confidence            66777777888898876665532 2345699999999998 78889999999999998877666643

>KOG1407|consensus

Probab=97.95  E-value=0.00025  Score=56.17  Aligned_cols=132  Identities=12%  Similarity=0.068  Sum_probs=99.0

Q ss_pred             CCceeeeeeCCCceeeeEE-eCCeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--e--CCEEEEE
Q psy16020          5 HPTPYPLNKILDTALPPVH-VQGRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--V--YNKVWCG   78 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~-~~~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v--~~~Lw~g   78 (151)
                      .++.+.+-+.+--+..|.. ..|.+|.. .++|+|-|.++.     .+++...|+-    +|..|+.+  -  +..+.+|
T Consensus       137 ~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyp-----sLkpv~si~A----H~snCicI~f~p~GryfA~G  207 (313)
T KOG1407|consen  137 TYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYP-----SLKPVQSIKA----HPSNCICIEFDPDGRYFATG  207 (313)
T ss_pred             ccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEecc-----cccccccccc----CCcceEEEEECCCCceEeec
Confidence            4566666666655555555 34455554 455899999886     3444444443    45555555  3  4668899


Q ss_pred             eCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         79 YKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        79 ~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                      +.+ .+-.||++.+-+++.|.-+.   -+|..+.++-+|- +.|+++|-.|-+=+++|++.+.+|.++.+..
T Consensus       208 sADAlvSLWD~~ELiC~R~isRld---wpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~  276 (313)
T KOG1407|consen  208 SADALVSLWDVDELICERCISRLD---WPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTF  276 (313)
T ss_pred             cccceeeccChhHhhhheeecccc---CceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCce
Confidence            876 79999999999999999774   5999999996665 8999999999999999999999999887654

>KOG1188|consensus

Probab=97.94  E-value=2.5e-05  Score=63.47  Aligned_cols=73  Identities=16%  Similarity=0.241  Sum_probs=56.0

Q ss_pred             CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         73 NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        73 ~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +.+.+++.| .|+++|..|++....|.+++.....|.-+..++..+.+|++.|++||+||+++......|+...
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~  114 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ  114 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence            568899875 8999999999999999999874334443333223446799999999999999988777665443

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.94  E-value=0.00036  Score=57.59  Aligned_cols=114  Identities=9%  Similarity=0.016  Sum_probs=81.3

Q ss_pred             eCCeEEEEecC-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-----------CeEEEEe
Q psy16020         24 VQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-----------NKIHVVD   87 (151)
Q Consensus        24 ~~~~v~vgl~n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-----------n~I~vid   87 (151)
                      ...++||--..     |+|.|++...     .+....++.|.  .|---+..-+++||+++.           +.|.|||
T Consensus        11 ~~~~v~V~d~~~~~~~~~v~ViD~~~-----~~v~g~i~~G~--~P~~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D   83 (352)
T TIGR02658        11 DARRVYVLDPGHFAATTQVYTIDGEA-----GRVLGMTDGGF--LPNPVVASDGSFFAHASTVYSRIARGKRTDYVEVID   83 (352)
T ss_pred             CCCEEEEECCcccccCceEEEEECCC-----CEEEEEEEccC--CCceeECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence            34567766655     8999998752     34556788886  554323333578998876           6899999


Q ss_pred             CCCCcEEEEEEecCCCC----CceeEEEEeCCEEEEEEcC---CCeEEEEeCCccceeeeEeCC
Q psy16020         88 PKSLVVLKSFDAHPRRE----SQVRQMTWAGDGVWVSIRL---DSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~----~~I~~m~~~~~~vwis~~~---d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +.|++..+++..-.+++    ..-..+.++++|-|+-..+   ++.|-+.|+.+.+.+.+|++-
T Consensus        84 ~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp  147 (352)
T TIGR02658        84 PQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP  147 (352)
T ss_pred             CccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC
Confidence            99999999999644322    2344666666665444333   899999999999999999874

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG0308|consensus

Probab=97.91  E-value=0.0003  Score=61.38  Aligned_cols=111  Identities=13%  Similarity=0.058  Sum_probs=87.3

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEE-EEeCCeEEEEeCCC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVW-CGYKNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw-~g~~n~I~vid~~t   90 (151)
                      ++|++|.-.++  -+..|..++.|.+|+...       ..+.++|..+...||++.+.+  .++- +++++.|.+||+.-
T Consensus       172 ~siYSLA~N~t~t~ivsGgtek~lr~wDprt-------~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq  244 (735)
T KOG0308|consen  172 DSIYSLAMNQTGTIIVSGGTEKDLRLWDPRT-------CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ  244 (735)
T ss_pred             cceeeeecCCcceEEEecCcccceEEecccc-------ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence            68888887766  455566678899987642       235677877779999999985  4555 45578999999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~  136 (151)
                      -+++.++.+|++   .|=++.++++ ...+|+++|+.|..=|.++++
T Consensus       245 QrCl~T~~vH~e---~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~  288 (735)
T KOG0308|consen  245 QRCLATYIVHKE---GVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA  288 (735)
T ss_pred             cceeeeEEeccC---ceEEEeeCCCcceEEecCCCCcEEecccCCch
Confidence            999999999987   5888877755 448899999999999999853

>KOG0288|consensus

Probab=97.90  E-value=2.3e-06  Score=70.76  Aligned_cols=123  Identities=12%  Similarity=0.084  Sum_probs=88.5

Q ss_pred             ceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE--EEEEeCCeEEEEeCCCC
Q psy16020         17 TALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK--VWCGYKNKIHVVDPKSL   91 (151)
Q Consensus        17 ~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~--Lw~g~~n~I~vid~~t~   91 (151)
                      -|.++.+..+  .++.|.+|-.|.+|+....+   .+.  .=.|..+..||+.|.+- +++  |..+.++..++||..++
T Consensus       177 ev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k---~~~--~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~  251 (459)
T KOG0288|consen  177 EVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK---SEL--ISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSL  251 (459)
T ss_pred             ccceeEEccCcchhhhcchhhhhhhhhcccch---hhh--hhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccch
Confidence            4555555443  68888888888888754222   111  11344455899999994 444  33444568999999999


Q ss_pred             cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      +...+|.+|++   .|++..+.-... -+|+++|.+|++||.....+..++.+....
T Consensus       252 r~~~TLsGHtd---kVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~c  305 (459)
T KOG0288|consen  252 RLRHTLSGHTD---KVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQC  305 (459)
T ss_pred             hhhhhhccccc---ceeeehhhccccceeeccccchhhhhhhhhhheeccccccccc
Confidence            99999999998   888888774444 789999999999999988888877655443

>KOG2106|consensus

Probab=97.89  E-value=0.0006  Score=58.18  Aligned_cols=122  Identities=15%  Similarity=0.087  Sum_probs=90.3

Q ss_pred             CCceeeeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-
Q psy16020          5 HPTPYPLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-   80 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-   80 (151)
                      ..+.+|+.+.-+++.|.-+++ |.|-+|.+.|...|++.        +....+.+....+|+.+|.+.  ++.|.+|+. 
T Consensus       397 ~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~--------e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d  468 (626)
T KOG2106|consen  397 DHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDT--------ETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD  468 (626)
T ss_pred             CCceeEEEEecCceeEeeccCcceEEEeeccceEEEEec--------ccceeEEEEecCCceEEEEEcCCCCEEEEecCC
Confidence            568899999999999998865 47889999999999975        344555555446999999996  578999995 


Q ss_pred             CeEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020         81 NKIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        81 n~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                      |.||++-.. ++......--++-  ++|+++.++.++- +.+-+-|-.|-.|.+....
T Consensus       469 ~~iyiy~Vs~~g~~y~r~~k~~g--s~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~  524 (626)
T KOG2106|consen  469 NHIYIYRVSANGRKYSRVGKCSG--SPITHLDWSSDSQFLVSNSGDYEILYWKPSECK  524 (626)
T ss_pred             CeEEEEEECCCCcEEEEeeeecC--ceeEEeeecCCCceEEeccCceEEEEEccccCc
Confidence            567666544 2332233332322  7999999997766 7788889999999666543

>KOG0313|consensus

Probab=97.89  E-value=0.00012  Score=60.30  Aligned_cols=117  Identities=18%  Similarity=0.153  Sum_probs=80.0

Q ss_pred             CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-C----CEEEEE
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-Y----NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~----~~Lw~g   78 (151)
                      +-|+.++.+.-+|=|-++.-.++.++.|.=||++.+|++.  |      -....+.++..||++.+-+ .    ..+-.|
T Consensus        94 ~aP~pl~~~~hdDWVSsv~~~~~~IltgsYDg~~riWd~~--G------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsa  165 (423)
T KOG0313|consen   94 TAPKPLQCFLHDDWVSSVKGASKWILTGSYDGTSRIWDLK--G------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSA  165 (423)
T ss_pred             CCCCccccccchhhhhhhcccCceEEEeecCCeeEEEecC--C------ceEEEEecCCcceeeeEEEecCCccceEEEe
Confidence            3455666666666666666667899999999999999875  2      1233444456999966654 2    225555


Q ss_pred             eCC-e--EEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020         79 YKN-K--IHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN  131 (151)
Q Consensus        79 ~~n-~--I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd  131 (151)
                      +.+ +  .+.|+......  ++.-.+|.+   .|.++...++|- .+|++-|..|++|+
T Consensus       166 s~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~---~V~sVsv~~sgtr~~SgS~D~~lkiWs  221 (423)
T KOG0313|consen  166 SMDQTLRLWKWNVGENKVKALKVCRGHKR---SVDSVSVDSSGTRFCSGSWDTMLKIWS  221 (423)
T ss_pred             cCCceEEEEEecCchhhhhHHhHhccccc---ceeEEEecCCCCeEEeecccceeeecc
Confidence            555 3  55555544433  333448976   899988776665 99999999999999

>KOG2445|consensus

Probab=97.88  E-value=0.00034  Score=56.42  Aligned_cols=111  Identities=20%  Similarity=0.271  Sum_probs=79.4

Q ss_pred             CceeeeEE--eCCeEEEEecCCcEEEEE-cCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe--CCeEEEEe
Q psy16020         16 DTALPPVH--VQGRVVCALADGSVAIFR-RGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY--KNKIHVVD   87 (151)
Q Consensus        16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~-~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~--~n~I~vid   87 (151)
                      |-|.|..|  ++.++-.+.+|+++.||+ .+..|.|....  ..+.++  .+|-.+.-..   +++-+.|  +..+.||.
T Consensus        14 DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts--~Wrah~--~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   14 DLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTS--SWRAHD--GSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             ceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEee--eEEecC--CcEEEEEecCccccceEEEEecCCceeeee
Confidence            56777766  577899999999999999 67788886543  456666  7776666642   5544444  56899996


Q ss_pred             CCCCcEEEEEEec----------CCCCCceeEEEEeCC--EE-EEEEcCCCeEEEEeCCc
Q psy16020         88 PKSLVVLKSFDAH----------PRRESQVRQMTWAGD--GV-WVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        88 ~~t~~i~~~~~~h----------~~~~~~I~~m~~~~~--~v-wis~~~d~~l~lwd~~t  134 (151)
                      -.    ++.+++|          .|..++|+.+.+.+.  |. ..+++.|++||+|++-.
T Consensus        90 E~----~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~d  145 (361)
T KOG2445|consen   90 EQ----EKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPD  145 (361)
T ss_pred             ec----ccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCC
Confidence            42    2223322          244578999999865  44 89999999999999864

>KOG0270|consensus

Probab=97.88  E-value=0.0001  Score=61.52  Aligned_cols=120  Identities=18%  Similarity=0.129  Sum_probs=86.0

Q ss_pred             eeeeeeCCCceeeeEEe---------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC------------------
Q psy16020          8 PYPLNKILDTALPPVHV---------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL------------------   60 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~---------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~------------------   60 (151)
                      +-|-+=||...+|+...         +|++-+|.-|-.|-||+..--   |.-.| .+.||.                  
T Consensus       166 vHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~---d~v~P-~~~LGs~~sk~~~k~~k~~~~~~g  241 (463)
T KOG0270|consen  166 VHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIV---DAVLP-CVTLGSKASKKKKKKGKRSNSASG  241 (463)
T ss_pred             EecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccc---ccccc-ceeechhhhhhhhhhccccccccc
Confidence            44566788888998663         468999999999999987511   11122 334542                  


Q ss_pred             CCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020         61 PHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        61 ~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t  134 (151)
                      +..-|-.|+.+.   +-|.-|+. .+|.+||..++++.++++.|..   .|++|.+-+  ..++++++.|+++.|+|.|.
T Consensus       242 HTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k---~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~  318 (463)
T KOG0270|consen  242 HTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGK---KVQTLEWHPYEPSVLLSGSYDGTVALKDCRD  318 (463)
T ss_pred             chHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCC---ceeEEEecCCCceEEEeccccceEEeeeccC
Confidence            111222333332   44666664 5899999999999999998865   999999984  46799999999999999994

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=97.87  E-value=0.0017  Score=52.08  Aligned_cols=129  Identities=10%  Similarity=0.104  Sum_probs=79.1

Q ss_pred             eeeeeCCCceeeeEEe--CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CC
Q psy16020          9 YPLNKILDTALPPVHV--QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KN   81 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~--~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n   81 (151)
                      +.++.+++.+..|...  ++++|++. .+|.|.+|+.+.+|...    ..+..........++.+.  ++.+|+++  +|
T Consensus        73 ~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~  148 (330)
T PRK11028         73 AAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPV----APIQIIEGLEGCHSANIDPDNRTLWVPCLKED  148 (330)
T ss_pred             eeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCC----CceeeccCCCcccEeEeCCCCCEEEEeeCCCC
Confidence            4445566566666665  44688876 47899999987555321    111111101334555554  35788887  37


Q ss_pred             eEEEEeCCC-CcEEE----EEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC----ccceeeeEeC
Q psy16020         82 KIHVVDPKS-LVVLK----SFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH----TYQHLQDVDI  143 (151)
Q Consensus        82 ~I~vid~~t-~~i~~----~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~----t~~~l~~idi  143 (151)
                      +|.+||.++ +++..    .....  .....++|.++++  .++++...++.|.+||..    +.+..++++.
T Consensus       149 ~v~v~d~~~~g~l~~~~~~~~~~~--~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~  219 (330)
T PRK11028        149 RIRLFTLSDDGHLVAQEPAEVTTV--EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDM  219 (330)
T ss_pred             EEEEEEECCCCcccccCCCceecC--CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEec
Confidence            999999976 33321    11211  1245678888866  556777779999999986    3466777754

>KOG2096|consensus

Probab=97.86  E-value=0.00037  Score=56.63  Aligned_cols=125  Identities=14%  Similarity=0.161  Sum_probs=78.1

Q ss_pred             CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcce--EEEeCCC-CCceEEEeeeCC----EEEEEeCCeEEEE
Q psy16020         16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYH--TVTLGLP-HHSVRSLAAVYN----KVWCGYKNKIHVV   86 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~--~i~l~~~-~~pV~~m~~v~~----~Lw~g~~n~I~vi   86 (151)
                      +.|+|+.+.  ++++-...+||+|.+|+..     |+....  .+...-+ ..| +.+.+.++    -+||..||++++|
T Consensus        87 ~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~-----DF~~~eHr~~R~nve~dhp-T~V~FapDc~s~vv~~~~g~~l~vy  160 (420)
T KOG2096|consen   87 KEVTDVAFSSDGKKLATISGDRSIRLWDVR-----DFENKEHRCIRQNVEYDHP-TRVVFAPDCKSVVVSVKRGNKLCVY  160 (420)
T ss_pred             CceeeeEEcCCCceeEEEeCCceEEEEecc-----hhhhhhhhHhhccccCCCc-eEEEECCCcceEEEEEccCCEEEEE
Confidence            699999985  3478888899999999886     443332  2221110 133 23344432    2778889999998


Q ss_pred             eCC---CCcEEEE------EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         87 DPK---SLVVLKS------FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        87 d~~---t~~i~~~------~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      -..   .|..-..      ++-|......|..+-..++++ .+|++.|..|.|||.+ ++.|+.||.....
T Consensus       161 k~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~  230 (420)
T KOG2096|consen  161 KLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSS  230 (420)
T ss_pred             EeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccccc
Confidence            643   1221111      111111112344455556666 7899999999999999 9999999965543

>KOG0643|consensus

Probab=97.85  E-value=0.00017  Score=57.26  Aligned_cols=90  Identities=13%  Similarity=0.078  Sum_probs=73.7

Q ss_pred             EEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEe
Q psy16020         56 VTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYN  131 (151)
Q Consensus        56 i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd  131 (151)
                      |.+-.+..|++-+-++ ++.|-..|  +...-||=..+|+.+.+..+|+.   .|-|+..+-+ .-.++++-|.+++|||
T Consensus         4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtG---avW~~Did~~s~~liTGSAD~t~kLWD   80 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTG---AVWCCDIDWDSKHLITGSADQTAKLWD   80 (327)
T ss_pred             cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCc---eEEEEEecCCcceeeeccccceeEEEE
Confidence            3444467999999997 45555555  35799999999999999999985   8999988844 3489999999999999


Q ss_pred             CCccceeeeEeCCcccc
Q psy16020        132 AHTYQHLQDVDIEPYVS  148 (151)
Q Consensus       132 ~~t~~~l~~idi~~~v~  148 (151)
                      +++++.+..++.-.+|.
T Consensus        81 v~tGk~la~~k~~~~Vk   97 (327)
T KOG0643|consen   81 VETGKQLATWKTNSPVK   97 (327)
T ss_pred             cCCCcEEEEeecCCeeE
Confidence            99999999998776664

>KOG0772|consensus

Probab=97.85  E-value=0.00031  Score=59.97  Aligned_cols=129  Identities=14%  Similarity=0.151  Sum_probs=86.4

Q ss_pred             eeeeCC---CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC-CCceEEEeee--CCEEEEEeCC
Q psy16020         10 PLNKIL---DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSLAAV--YNKVWCGYKN   81 (151)
Q Consensus        10 ~~i~l~---~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-~~pV~~m~~v--~~~Lw~g~~n   81 (151)
                      ++|+|+   ..|..|...  +-+++.|.-|-++..|+...   .|...+.--.|-.+ .++|+++.+.  ++++-|.+|+
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~g---Mdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~  235 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQG---MDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS  235 (641)
T ss_pred             ceEeccCCceEEEEeeecCCCceeeeccccceEEEEeccc---ccccchhhhccCcccccccceeeecCCCCeEEEEecC
Confidence            466666   367777664  34899999999999998861   12222221122211 2899999985  6889999987


Q ss_pred             -eEEEEeCCCCcEEEEEEecC------CCC---CceeEEEEeC--CEEEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020         82 -KIHVVDPKSLVVLKSFDAHP------RRE---SQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT-YQHLQDV  141 (151)
Q Consensus        82 -~I~vid~~t~~i~~~~~~h~------~~~---~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t-~~~l~~i  141 (151)
                       +..++|.+.+++.....+..      +..   ..++|-.+-+  .+.+++++.|+++|+||... .++++-|
T Consensus       236 aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVi  308 (641)
T KOG0772|consen  236 AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVI  308 (641)
T ss_pred             cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEE
Confidence             79999999888776655321      000   1344433332  24589999999999999985 5666666

>KOG0647|consensus

Probab=97.84  E-value=0.00059  Score=54.92  Aligned_cols=131  Identities=12%  Similarity=0.185  Sum_probs=91.6

Q ss_pred             CCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020          5 HPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KN   81 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n   81 (151)
                      +...+.+++||+.++++--....+.||+++-.|++|....+.    .+.+.++-. -+.-+||++...  +.-..|+ .+
T Consensus       146 ~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~----te~k~~~Sp-Lk~Q~R~va~f~d~~~~alGsiEG  220 (347)
T KOG0647|consen  146 SSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPP----TEFKRIESP-LKWQTRCVACFQDKDGFALGSIEG  220 (347)
T ss_pred             CCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCc----chhhhhcCc-ccceeeEEEEEecCCceEeeeecc
Confidence            456789999999999998777789999999999999885321    111222111 135678988863  2234555 68


Q ss_pred             eEEEEeCCCC--cEEEEEEecCCCC------CceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeee
Q psy16020         82 KIHVVDPKSL--VVLKSFDAHPRRE------SQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        82 ~I~vid~~t~--~i~~~~~~h~~~~------~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      ++.|...+..  +-.-+|..|.+.+      -.|+.+++-+ .|-+++.+.|++...||......|.+
T Consensus       221 rv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~  288 (347)
T KOG0647|consen  221 RVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKT  288 (347)
T ss_pred             eEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhc
Confidence            8777776665  5566688886422      2466666664 36699999999999999986655554

>KOG1007|consensus

Probab=97.84  E-value=0.0001  Score=59.06  Aligned_cols=119  Identities=15%  Similarity=0.173  Sum_probs=82.1

Q ss_pred             CceeeeEEeCCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC---CCceEEEee---e-CCEEEEEeCCeEEEEe
Q psy16020         16 DTALPPVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSVRSLAA---V-YNKVWCGYKNKIHVVD   87 (151)
Q Consensus        16 ~~V~~i~~~~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV~~m~~---v-~~~Lw~g~~n~I~vid   87 (151)
                      ..|.|+.+.+|. =.+++.+..|++|++.+...-    ...+....+   +...++-.-   . ++++-+..+.++..||
T Consensus       124 g~i~cvew~Pns~klasm~dn~i~l~~l~ess~~----vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D  199 (370)
T KOG1007|consen  124 GKINCVEWEPNSDKLASMDDNNIVLWSLDESSKI----VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWD  199 (370)
T ss_pred             CceeeEEEcCCCCeeEEeccCceEEEEcccCcch----heeecccccccccceecccccCCCCccceEEEeCCCcEEEEE
Confidence            478899998874 778888999999998743210    111111110   111111111   1 3667778888999999


Q ss_pred             CCCCcEEEEEE-ecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020         88 PKSLVVLKSFD-AHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT-YQHLQDV  141 (151)
Q Consensus        88 ~~t~~i~~~~~-~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t-~~~l~~i  141 (151)
                      .+|++..-+++ +|-   +.|..|.+-++  .+++|+++|+.||+||++. ..+++++
T Consensus       200 ~RT~~~~~sI~dAHg---q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el  254 (370)
T KOG1007|consen  200 LRTMKKNNSIEDAHG---QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQEL  254 (370)
T ss_pred             ccchhhhcchhhhhc---ceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccccc
Confidence            99998777766 453   47888888755  5699999999999999995 6677766

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.84  E-value=0.0046  Score=49.16  Aligned_cols=137  Identities=7%  Similarity=0.101  Sum_probs=91.0

Q ss_pred             CCCCceeeeeeCCCceee--eEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          3 YPHPTPYPLNKILDTALP--PVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      ..+.+.+.+.+||...|.  |...++++|.=. -+|...+|+.+     +++....++..   .-=-.|..-+++||.+.
T Consensus        75 ~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~-----tl~~~~~~~y~---~EGWGLt~dg~~Li~SD  146 (264)
T PF05096_consen   75 LETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPN-----TLKKIGTFPYP---GEGWGLTSDGKRLIMSD  146 (264)
T ss_dssp             TTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETT-----TTEEEEEEE-S---SS--EEEECSSCEEEE-
T ss_pred             CCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccc-----cceEEEEEecC---CcceEEEcCCCEEEEEC
Confidence            456678888888876653  455566666433 34667777764     34444444442   22234555567899999


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      | ++|+.+|+++++.++++++..+.  -..++-|++.+..+|.-.=.+..|-.-|..|++....||+++-.
T Consensus       147 GS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~  217 (264)
T PF05096_consen  147 GSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLR  217 (264)
T ss_dssp             SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHH
T ss_pred             CccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhh
Confidence            8 59999999999999999987432  33688899999999999999999999999999999999987643

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.84  E-value=0.0014  Score=54.25  Aligned_cols=142  Identities=18%  Similarity=0.254  Sum_probs=94.2

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC------CCceEEEee-eCCEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP------HHSVRSLAA-VYNKV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~------~~pV~~m~~-v~~~L   75 (151)
                      .++.+.+.+|.+|+-..-....+..-++-..||....+....+|.   ......++.+.      +.|  .... -+..+
T Consensus       135 ~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~---~~~~~~~vf~~~~~~v~~rP--~~~~~dg~~~  209 (352)
T TIGR02658       135 LEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGN---PKIKPTEVFHPEDEYLINHP--AYSNKSGRLV  209 (352)
T ss_pred             CCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCc---eEEeeeeeecCCccccccCC--ceEcCCCcEE
Confidence            567889999999986666666666666778899999998887775   12333444221      356  2233 24679


Q ss_pred             EEEeCCeEEEEe-----CCCCcEEEEEEecCC----CCCceeEEEEe--CCEEEEEE---------cCCCeEEEEeCCcc
Q psy16020         76 WCGYKNKIHVVD-----PKSLVVLKSFDAHPR----RESQVRQMTWA--GDGVWVSI---------RLDSTLRMYNAHTY  135 (151)
Q Consensus        76 w~g~~n~I~vid-----~~t~~i~~~~~~h~~----~~~~I~~m~~~--~~~vwis~---------~~d~~l~lwd~~t~  135 (151)
                      |+++.++|+++|     +..++....+.....    ....++-+++.  +..+|++.         ..++.|-++|+.|.
T Consensus       210 ~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~  289 (352)
T TIGR02658       210 WPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTG  289 (352)
T ss_pred             EEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCC
Confidence            999999999999     555555554432211    01122225555  66778854         33369999999999


Q ss_pred             ceeeeEeCCccccc
Q psy16020        136 QHLQDVDIEPYVSK  149 (151)
Q Consensus       136 ~~l~~idi~~~v~~  149 (151)
                      +.+..|.+......
T Consensus       290 kvi~~i~vG~~~~~  303 (352)
T TIGR02658       290 KRLRKIELGHEIDS  303 (352)
T ss_pred             eEEEEEeCCCceee
Confidence            99999987765543

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG0322|consensus

Probab=97.83  E-value=8.2e-05  Score=58.92  Aligned_cols=112  Identities=16%  Similarity=0.208  Sum_probs=82.3

Q ss_pred             CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEe--CCeEEEEe
Q psy16020         14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGY--KNKIHVVD   87 (151)
Q Consensus        14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~--~n~I~vid   87 (151)
                      +..+|+++-|..  ++=..|.++-.++.|+.+.+ |  .+..+..+++-+  .-|..+.+ .++++.+..  +++|+||+
T Consensus       204 h~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~g--slq~~~e~~lkn--pGv~gvrIRpD~KIlATAGWD~RiRVys  279 (323)
T KOG0322|consen  204 HKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTG--SLQIRKEITLKN--PGVSGVRIRPDGKILATAGWDHRIRVYS  279 (323)
T ss_pred             ccCcceeeeechhhcCCcCCCccccceeeeeccccC--cccccceEEecC--CCccceEEccCCcEEeecccCCcEEEEE
Confidence            446888888753  23455666668999998743 3  233445566655  33444444 466766555  37999999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeC
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNA  132 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~  132 (151)
                      -+|++.+..+.-|+.   .|++++++++ ++..+++.|+.|.||+.
T Consensus       280 wrtl~pLAVLkyHsa---gvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  280 WRTLNPLAVLKYHSA---GVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             eccCCchhhhhhhhc---ceeEEEeCCCCchhhhccCCceEEeeec
Confidence            999999999999975   8999999987 88999999999999974

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=97.83  E-value=0.00079  Score=55.73  Aligned_cols=118  Identities=10%  Similarity=-0.018  Sum_probs=78.7

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-   80 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-   80 (151)
                      ..+.+.+|+-+++.. ..+...+++||++..+|.|..++...+. .|..+.     +..  ....+.++.++.||++.. 
T Consensus       273 ~~tG~~~W~~~~~~~-~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~-----~~~--~~~~sp~v~~g~l~v~~~~  344 (394)
T PRK11138        273 LRSGQIVWKREYGSV-NDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSD-----LLH--RLLTAPVLYNGYLVVGDSE  344 (394)
T ss_pred             CCCCCEEEeecCCCc-cCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccc-----cCC--CcccCCEEECCEEEEEeCC
Confidence            456677888776543 3456678899999999999999985432 364322     111  222333457899999985 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYN  131 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd  131 (151)
                      +.|+++|++|++++-+......  .........++.++ -..+|+.|..+.
T Consensus       345 G~l~~ld~~tG~~~~~~~~~~~--~~~s~P~~~~~~l~-v~t~~G~l~~~~  392 (394)
T PRK11138        345 GYLHWINREDGRFVAQQKVDSS--GFLSEPVVADDKLL-IQARDGTVYAIT  392 (394)
T ss_pred             CEEEEEECCCCCEEEEEEcCCC--cceeCCEEECCEEE-EEeCCceEEEEe
Confidence            6899999999999888876422  12223334456644 557888888765

>KOG0277|consensus

Probab=97.82  E-value=0.00011  Score=57.99  Aligned_cols=99  Identities=18%  Similarity=0.262  Sum_probs=73.5

Q ss_pred             EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEeCCCCc-EEEEEEecCC
Q psy16020         28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVDPKSLV-VLKSFDAHPR  102 (151)
Q Consensus        28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid~~t~~-i~~~~~~h~~  102 (151)
                      +--+.+||++.+|+...-|     .+-.|+...  ..|.|+....   +-|+.|. +|.|++||...++ .+..+.+|.-
T Consensus       163 fas~Sgd~~l~lwdvr~~g-----k~~~i~ah~--~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~  235 (311)
T KOG0277|consen  163 FASASGDGTLRLWDVRSPG-----KFMSIEAHN--SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGL  235 (311)
T ss_pred             EEEccCCceEEEEEecCCC-----ceeEEEecc--ceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCce
Confidence            3344568999999875333     222345544  7899998863   4466665 5789999999877 6677788864


Q ss_pred             CCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccc
Q psy16020        103 RESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus       103 ~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~  136 (151)
                         .|..+++++.  .++.|++.|-++|+||.+..+
T Consensus       236 ---AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d  268 (311)
T KOG0277|consen  236 ---AVRKVKFSPHHASLLASASYDMTVRIWDPERQD  268 (311)
T ss_pred             ---EEEEEecCcchhhHhhhccccceEEecccccch
Confidence               7999999965  679999999999999998543

>KOG0642|consensus

Probab=97.79  E-value=0.00017  Score=61.82  Aligned_cols=108  Identities=16%  Similarity=0.240  Sum_probs=79.9

Q ss_pred             CCeEEEEecCCcEEEEEc---CCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEE------eCCC-C
Q psy16020         25 QGRVVCALADGSVAIFRR---GPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVV------DPKS-L   91 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~---~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vi------d~~t-~   91 (151)
                      +..++.|..||.|-+|..   .+.+.-++++  ...+..+..||-|+.+..  .++|-|. ++.|..|      |+.+ .
T Consensus       306 ep~lit~sed~~lk~WnLqk~~~s~~~~~ep--i~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~  383 (577)
T KOG0642|consen  306 EPVLITASEDGTLKLWNLQKAKKSAEKDVEP--ILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSY  383 (577)
T ss_pred             CCeEEEeccccchhhhhhcccCCccccceee--eEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCccccc
Confidence            456999999999999988   2222223332  445555679999999974  5688777 6899999      4332 2


Q ss_pred             ---cEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce
Q psy16020         92 ---VVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        92 ---~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~  137 (151)
                         .+...+.+|++   .|-.+++++..- ++|++-|+++|+|.....++
T Consensus       384 dp~vl~~~l~Ghtd---avw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~  430 (577)
T KOG0642|consen  384 DPSVLSGTLLGHTD---AVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP  430 (577)
T ss_pred             Ccchhccceecccc---ceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence               35677999998   887888874433 88999999999999986555

>KOG0645|consensus

Probab=97.75  E-value=0.0025  Score=50.76  Aligned_cols=121  Identities=17%  Similarity=0.316  Sum_probs=89.8

Q ss_pred             CceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCC-
Q psy16020         16 DTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK-   89 (151)
Q Consensus        16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~-   89 (151)
                      .+|-++..  ++++|-+|.=|+++.+|... ++.|.    ..-.|-.+...|.|++...  +.|...+.+ .|.||... 
T Consensus        62 rsVRsvAwsp~g~~La~aSFD~t~~Iw~k~-~~efe----cv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de  136 (312)
T KOG0645|consen   62 RSVRSVAWSPHGRYLASASFDATVVIWKKE-DGEFE----CVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE  136 (312)
T ss_pred             heeeeeeecCCCcEEEEeeccceEEEeecC-CCcee----EEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC
Confidence            46666666  56678888889999999864 44332    1335556679999999974  446555554 79999876 


Q ss_pred             --CCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCC---ccceeeeEeCC
Q psy16020         90 --SLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAH---TYQHLQDVDIE  144 (151)
Q Consensus        90 --t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~---t~~~l~~idi~  144 (151)
                        .+++...++.|+-   -|..+..-| .+++.|++.|++||+|.-.   ..+++|.|+-.
T Consensus       137 ddEfec~aVL~~Htq---DVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~  194 (312)
T KOG0645|consen  137 DDEFECIAVLQEHTQ---DVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGH  194 (312)
T ss_pred             CCcEEEEeeeccccc---cccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCc
Confidence              3557788999974   688877775 4889999999999999877   57888888743

>KOG0293|consensus

Probab=97.75  E-value=0.00017  Score=60.16  Aligned_cols=111  Identities=14%  Similarity=0.134  Sum_probs=82.3

Q ss_pred             EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-C-CeEEEEeCCCCcEEEEEE
Q psy16020         22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-K-NKIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~-n~I~vid~~t~~i~~~~~   98 (151)
                      .+.+..|+.-..|-.+.+|++.+.     .   ...+-.-+.||++..+.+ +++..-. . +.|+.||.+.-++.+.+.
T Consensus       363 t~Dgk~vl~v~~d~~i~l~~~e~~-----~---dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~  434 (519)
T KOG0293|consen  363 TYDGKYVLLVTVDKKIRLYNREAR-----V---DRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYF  434 (519)
T ss_pred             cCCCcEEEEEecccceeeechhhh-----h---hhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhh
Confidence            456778888889999999988521     1   111222248999999986 5566554 4 579999999999999999


Q ss_pred             ecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         99 AHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        99 ~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +|+.+ ..|-.-.+.|.  ..-+|+++|+.|++||-++++++.++
T Consensus       435 Ghkq~-~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L  478 (519)
T KOG0293|consen  435 GHKQG-HFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL  478 (519)
T ss_pred             ccccc-ceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee
Confidence            99753 33443344433  45789999999999999999999887

>KOG2096|consensus

Probab=97.72  E-value=0.0002  Score=58.12  Aligned_cols=114  Identities=14%  Similarity=0.223  Sum_probs=85.8

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC------CCCceEE-EeeeCCEEEEEeCCeEEEE
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL------PHHSVRS-LAAVYNKVWCGYKNKIHVV   86 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~------~~~pV~~-m~~v~~~Lw~g~~n~I~vi   86 (151)
                      ++|+.+.+.++  ++....-||+..+|+.+-.-.-+ +.|+.++.|.      -..|+|- |.+.++-|.++.|..+.++
T Consensus       279 saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~-qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~  357 (420)
T KOG2096|consen  279 SAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG-QDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVF  357 (420)
T ss_pred             hheeeeeeCCCcceeEEEecCCcEEEeeccceEecC-CCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEE
Confidence            68899888765  68888889999999876211000 2455555552      1288853 3334566888889999999


Q ss_pred             eCCCCcEEEEEE-ecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         87 DPKSLVVLKSFD-AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        87 d~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      ++++++.+.+++ +|+   ..|.++.++.+|-++..-.|..+++++..
T Consensus       358 ~se~g~~~~~~e~~h~---~~Is~is~~~~g~~~atcGdr~vrv~~nt  402 (420)
T KOG2096|consen  358 ASEDGKDYPELEDIHS---TTISSISYSSDGKYIATCGDRYVRVIRNT  402 (420)
T ss_pred             EcccCccchhHHHhhc---CceeeEEecCCCcEEeeecceeeeeecCC
Confidence            999999999988 465   38999999999998888899999998844

>KOG1273|consensus

Probab=97.72  E-value=0.00079  Score=54.67  Aligned_cols=128  Identities=17%  Similarity=0.115  Sum_probs=84.0

Q ss_pred             eeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEE
Q psy16020         10 PLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIH   84 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~   84 (151)
                      +.+.+|. ..|+.+.  +..|-+|++||.|++|+...     +..-+  .++.+-.||.|+.-..  ..|-.++ +++|.
T Consensus        19 ~tld~~~-a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T-----~~iar--~lsaH~~pi~sl~WS~dgr~LltsS~D~si~   90 (405)
T KOG1273|consen   19 HTLDNPL-AECCQFSRWGDYLAVGCANGRVVIYDFDT-----FRIAR--MLSAHVRPITSLCWSRDGRKLLTSSRDWSIK   90 (405)
T ss_pred             eeccCCc-cceEEeccCcceeeeeccCCcEEEEEccc-----cchhh--hhhccccceeEEEecCCCCEeeeecCCceeE
Confidence            4456666 7888886  45799999999999998752     11111  2344459999999873  4577777 57999


Q ss_pred             EEeCCCCcEEEEEE---------ecCCCCC---------cee-------------------------EEEEeCCEE-EEE
Q psy16020         85 VVDPKSLVVLKSFD---------AHPRRES---------QVR-------------------------QMTWAGDGV-WVS  120 (151)
Q Consensus        85 vid~~t~~i~~~~~---------~h~~~~~---------~I~-------------------------~m~~~~~~v-wis  120 (151)
                      .||...+.+.+++-         -|+....         +-.                         +-.+...|- -++
T Consensus        91 lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIit  170 (405)
T KOG1273|consen   91 LWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIIT  170 (405)
T ss_pred             EEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEE
Confidence            99999999888765         1221100         000                         011111222 356


Q ss_pred             EcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        121 IRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       121 ~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +..-|.+.+||++|.+++..+-+..
T Consensus       171 GtsKGkllv~~a~t~e~vas~rits  195 (405)
T KOG1273|consen  171 GTSKGKLLVYDAETLECVASFRITS  195 (405)
T ss_pred             ecCcceEEEEecchheeeeeeeech
Confidence            6667889999999999988776554

>KOG0269|consensus

Probab=97.71  E-value=0.00011  Score=65.07  Aligned_cols=103  Identities=12%  Similarity=0.198  Sum_probs=79.7

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h  100 (151)
                      .|.++++-.||.|.+|+.+..+    .++....+..+...++++.+..   +-|--|+. +.|+.||.+.-+-..+|-+.
T Consensus       100 ~NlIAT~s~nG~i~vWdlnk~~----rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n  175 (839)
T KOG0269|consen  100 SNLIATCSTNGVISVWDLNKSI----RNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN  175 (839)
T ss_pred             hhhheeecCCCcEEEEecCccc----cchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc
Confidence            4578899999999999987422    2322223344668999999973   56777885 69999999999988888876


Q ss_pred             CCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc
Q psy16020        101 PRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus       101 ~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t  134 (151)
                      ++   +|..+++++  ...+.|+.++|.|++||.+.
T Consensus       176 SE---SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq  208 (839)
T KOG0269|consen  176 SE---SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ  208 (839)
T ss_pred             ch---hhhceeeccCCCceEEEecCCceEEEeeccC
Confidence            54   788888883  34599999999999999995

>KOG0292|consensus

Probab=97.71  E-value=0.00047  Score=62.20  Aligned_cols=109  Identities=15%  Similarity=0.130  Sum_probs=85.6

Q ss_pred             CceeeeEEeCCe-EEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe--CC-eEEEEeCCC
Q psy16020         16 DTALPPVHVQGR-VVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY--KN-KIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~~~-v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~--~n-~I~vid~~t   90 (151)
                      .||--+.+++.+ +||+.+|- +|.||+.+.       ....++|-.+--=||...++...=|+=+  ++ +|.|||-.|
T Consensus        52 GpVRgv~FH~~qplFVSGGDDykIkVWnYk~-------rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs  124 (1202)
T KOG0292|consen   52 GPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-------RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS  124 (1202)
T ss_pred             CccceeeecCCCCeEEecCCccEEEEEeccc-------ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC
Confidence            588888888765 99988775 588887652       2233455444467888888887767544  44 799999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCc
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t  134 (151)
                      .++...+.+|.   .+|-|-.+-+ +..-+|++-|-+||+||..-
T Consensus       125 r~~iavltGHn---HYVMcAqFhptEDlIVSaSLDQTVRVWDisG  166 (1202)
T KOG0292|consen  125 RKCIAVLTGHN---HYVMCAQFHPTEDLIVSASLDQTVRVWDISG  166 (1202)
T ss_pred             CceEEEEecCc---eEEEeeccCCccceEEEecccceEEEEeecc
Confidence            99999999996   4888888877 67789999999999999974

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.71  E-value=0.0018  Score=56.07  Aligned_cols=143  Identities=15%  Similarity=0.069  Sum_probs=89.2

Q ss_pred             CCCCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCC---CCCceEEEeeeCCEE
Q psy16020          3 YPHPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGL---PHHSVRSLAAVYNKV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~---~~~pV~~m~~v~~~L   75 (151)
                      +..-+..|+.++++.   -..-...++.||++..+|.|..++...+ ..|..+.........   ...--+.+++.+++|
T Consensus        44 v~~L~~~W~~~~g~~~g~~stPvv~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v  123 (527)
T TIGR03075        44 VKKLQPAWTFSLGKLRGQESQPLVVDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKV  123 (527)
T ss_pred             hccceEEEEEECCCCCCcccCCEEECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEE
Confidence            344567788888632   1223446889999999999999987643 246543211000000   000013356678999


Q ss_pred             EEEe-CCeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeEeCCc
Q psy16020         76 WCGY-KNKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        76 w~g~-~n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++++ +++++.+|++|+++.=++..... ....+. .-.+.++.|++..+     .++.|..+|++|++.+-..+.-|
T Consensus       124 ~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p  201 (527)
T TIGR03075       124 FFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVP  201 (527)
T ss_pred             EEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcC
Confidence            9998 47999999999998876653211 011122 22233556665443     36899999999999999887654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1034|consensus

Probab=97.71  E-value=0.0006  Score=55.48  Aligned_cols=117  Identities=17%  Similarity=0.175  Sum_probs=80.1

Q ss_pred             ceeeeEEe------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCC-CceEEEeee---C-CEEE--EEeC
Q psy16020         17 TALPPVHV------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPH-HSVRSLAAV---Y-NKVW--CGYK   80 (151)
Q Consensus        17 ~V~~i~~~------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~-~pV~~m~~v---~-~~Lw--~g~~   80 (151)
                      +|+...+.      +-+||+--+...+.+|+...+| |    ...++..   ++. +--+|--.-   + +-+-  .|+.
T Consensus        40 ~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~-~----ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~  114 (385)
T KOG1034|consen   40 PIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDG-G----IRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL  114 (385)
T ss_pred             ccceeeeehhcCCCCCceEEEeCCcEEEEEEECCcc-c----eeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence            55555554      3357776666689999987655 1    1122211   111 223333332   1 2222  2334


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +-|+|||..++++.+.+-+|..   .|+.+...+..  ..+|++.|-.|||||.++..++.-|
T Consensus       115 GvIrVid~~~~~~~~~~~ghG~---sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf  174 (385)
T KOG1034|consen  115 GVIRVIDVVSGQCSKNYRGHGG---SINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF  174 (385)
T ss_pred             eEEEEEecchhhhccceeccCc---cchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe
Confidence            7899999999999999999975   89999998775  7899999999999999998877654

>KOG0302|consensus

Probab=97.71  E-value=0.00022  Score=58.79  Aligned_cols=96  Identities=19%  Similarity=0.298  Sum_probs=67.0

Q ss_pred             cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeCCCCcEEEE--EEecCCCCCceeE
Q psy16020         36 SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPKSLVVLKS--FDAHPRRESQVRQ  109 (151)
Q Consensus        36 ~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~~t~~i~~~--~~~h~~~~~~I~~  109 (151)
                      .|..|.+.. |.|.++..   ++-.+..+|--+.-.  ++.+.++|  ++.|.|||++++.-...  ..+|.   +-|+.
T Consensus       235 ~I~lw~~~~-g~W~vd~~---Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~---sDVNV  307 (440)
T KOG0302|consen  235 GIHLWEPST-GSWKVDQR---PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHN---SDVNV  307 (440)
T ss_pred             ceEeeeecc-CceeecCc---cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccC---Cceee
Confidence            466676655 88977643   222245777766664  46677655  67999999999842222  26674   37888


Q ss_pred             EEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020        110 MTWAGD-GVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus       110 m~~~~~-~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      +.+.+. ..++|+++++++++||.++++.-
T Consensus       308 ISWnr~~~lLasG~DdGt~~iwDLR~~~~~  337 (440)
T KOG0302|consen  308 ISWNRREPLLASGGDDGTLSIWDLRQFKSG  337 (440)
T ss_pred             EEccCCcceeeecCCCceEEEEEhhhccCC
Confidence            888744 45899999999999999986544

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.69  E-value=0.0098  Score=47.85  Aligned_cols=136  Identities=10%  Similarity=0.110  Sum_probs=85.1

Q ss_pred             ceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEE-
Q psy16020          7 TPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIH-   84 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~-   84 (151)
                      +.+++.+++.+|++|...++++.+|. ++.|.+|++..+..     .......+....+.+|...++.+++|.- ..|. 
T Consensus        80 ~~i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~-----l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~  153 (321)
T PF03178_consen   80 KLIHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKT-----LLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSL  153 (321)
T ss_dssp             EEEEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSS-----EEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCccc-----chhhheecceEEEEEEeccccEEEEEEcccCEEE
Confidence            45667788999999999999966666 89999999864320     1111222223688899999999999984 3444 


Q ss_pred             -EEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCC-----------ccceeeeEeCCcccccc
Q psy16020         85 -VVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAH-----------TYQHLQDVDIEPYVSKM  150 (151)
Q Consensus        85 -vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~-----------t~~~l~~idi~~~v~~~  150 (151)
                       -|+.+..+.. .+.-... ...+.++.+. .....+.++.++.|.++...           ..+....+.+...++++
T Consensus       154 ~~~~~~~~~l~-~va~d~~-~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~  230 (321)
T PF03178_consen  154 LRYDEENNKLI-LVARDYQ-PRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSF  230 (321)
T ss_dssp             EEEETTTE-EE-EEEEESS--BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEE
T ss_pred             EEEEccCCEEE-EEEecCC-CccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceE
Confidence             4576443332 2221211 2357777776 22368899999998887765           34455666666666554

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG2048|consensus

Probab=97.66  E-value=0.00052  Score=59.97  Aligned_cols=81  Identities=16%  Similarity=0.264  Sum_probs=70.6

Q ss_pred             CceEEEeeeC--CEEEEEeC-CeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         63 HSVRSLAAVY--NKVWCGYK-NKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        63 ~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      ++|+||+++.  ++|.+|-. +.|-+||+.. .-.+..+++++|  +.|..+++++++=+.|.+-++.|.-||..+++++
T Consensus        26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~d--rsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~  103 (691)
T KOG2048|consen   26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPED--RSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQK  103 (691)
T ss_pred             cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCC--CceeeEEEccCCeEEeecCCceEEEEecccCcee
Confidence            9999999984  77888874 6999999885 567888888876  7999999997777889999999999999999999


Q ss_pred             eeEeCCc
Q psy16020        139 QDVDIEP  145 (151)
Q Consensus       139 ~~idi~~  145 (151)
                      ..+|+..
T Consensus       104 ~~~d~~g  110 (691)
T KOG2048|consen  104 YNIDSNG  110 (691)
T ss_pred             EEecCCC
Confidence            9988643

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=97.66  E-value=0.0048  Score=46.60  Aligned_cols=120  Identities=9%  Similarity=0.185  Sum_probs=84.2

Q ss_pred             eeeeeCC--CceeeeEEeCC--e--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-
Q psy16020          9 YPLNKIL--DTALPPVHVQG--R--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-   79 (151)
Q Consensus         9 l~~i~l~--~~V~~i~~~~~--~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-   79 (151)
                      ...+++.  .+|.++...++  +  +..|-.++.+.+|+..        ......++.  .+++.+...  ++.|.+|. 
T Consensus        51 ~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~--------~~~i~~~~~--~~~n~i~wsP~G~~l~~~g~  120 (194)
T PF08662_consen   51 VESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK--------GKKIFSFGT--QPRNTISWSPDGRFLVLAGF  120 (194)
T ss_pred             cceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc--------ccEeEeecC--CCceEEEECCCCCEEEEEEc
Confidence            4555665  47999998764  3  2334456789998763        223456665  788888876  35555543 


Q ss_pred             C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE-EEc------CCCeEEEEeCCccceeeeEeCC
Q psy16020         80 K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIR------LDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        80 ~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~------~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +   +.|.+||.++++...+++ |.    .++.+..+++|-++ +..      .|+-+++|+.. ++++.+.++.
T Consensus       121 ~n~~G~l~~wd~~~~~~i~~~~-~~----~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~~~~  189 (194)
T PF08662_consen  121 GNLNGDLEFWDVRKKKKISTFE-HS----DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKKPFD  189 (194)
T ss_pred             cCCCcEEEEEECCCCEEeeccc-cC----cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEecchh
Confidence            4   359999999999988887 43    57899999887633 222      37889999985 8899888764

>KOG2444|consensus

Probab=97.65  E-value=0.00025  Score=55.02  Aligned_cols=108  Identities=19%  Similarity=0.209  Sum_probs=77.6

Q ss_pred             EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16020         22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSF   97 (151)
Q Consensus        22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~   97 (151)
                      .-....+++|.++|.|.+|.++-.|.    .-..+..+.  ++|-||.+..   +..|+|++ ++|+.++++=.+.+...
T Consensus        67 ~~~~~~~~vG~~dg~v~~~n~n~~g~----~~d~~~s~~--e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~  140 (238)
T KOG2444|consen   67 VTASAKLMVGTSDGAVYVFNWNLEGA----HSDRVCSGE--ESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV  140 (238)
T ss_pred             cccCceEEeecccceEEEecCCccch----HHHhhhccc--ccceeccccccccceeEEeccCCceeeeccccCceeeee
Confidence            33456899999999999998752221    112344555  9999999984   37999997 58999999988888888


Q ss_pred             EecCCCCCceeEEEEeCCEEEEEE--cCCCeEEEEeCCccc
Q psy16020         98 DAHPRRESQVRQMTWAGDGVWVSI--RLDSTLRMYNAHTYQ  136 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~vwis~--~~d~~l~lwd~~t~~  136 (151)
                      -.|+. +.-...++..++.+..+.  +.|..++.|+....+
T Consensus       141 g~h~~-~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~  180 (238)
T KOG2444|consen  141 GQHNF-ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK  180 (238)
T ss_pred             ccccC-CCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence            77763 333444444455555555  789999999988543

>KOG0307|consensus

Probab=97.64  E-value=0.00025  Score=64.75  Aligned_cols=126  Identities=19%  Similarity=0.277  Sum_probs=89.6

Q ss_pred             CCCceeeeEEeC---CeEEEEecCCcEEEEEcCC----------------------------------CC---CCCCCcc
Q psy16020         14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGP----------------------------------DG---QWDLSKY   53 (151)
Q Consensus        14 l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~----------------------------------~~---~wd~~~~   53 (151)
                      .+.+|..|.++.   |-+-.|..||+|.+|+.++                                  .|   .||+..-
T Consensus       115 h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~  194 (1049)
T KOG0307|consen  115 HTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKK  194 (1049)
T ss_pred             cCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCC
Confidence            457888887753   3455556679999998873                                  11   3666533


Q ss_pred             -eEEEeCCCCCceEE--Eeee---CCEEEEEeCC----eEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE--EEEE
Q psy16020         54 -HTVTLGLPHHSVRS--LAAV---YNKVWCGYKN----KIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVS  120 (151)
Q Consensus        54 -~~i~l~~~~~pV~~--m~~v---~~~Lw~g~~n----~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis  120 (151)
                       ..|++++...-.+|  +.-+   ..+||++++.    .|..||.+ .....+.+++|..   .|.+|.+++.+  .++|
T Consensus       195 ~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~---GilslsWc~~D~~lllS  271 (1049)
T KOG0307|consen  195 KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQR---GILSLSWCPQDPRLLLS  271 (1049)
T ss_pred             CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhccccc---ceeeeccCCCCchhhhc
Confidence             35566652221222  2222   2679999962    59999976 4557788899975   89999999554  5899


Q ss_pred             EcCCCeEEEEeCCccceeeeEe
Q psy16020        121 IRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       121 ~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++.|+.+.+|+.+|+|.+.++-
T Consensus       272 sgkD~~ii~wN~~tgEvl~~~p  293 (1049)
T KOG0307|consen  272 SGKDNRIICWNPNTGEVLGELP  293 (1049)
T ss_pred             ccCCCCeeEecCCCceEeeecC
Confidence            9999999999999999999884

>KOG0268|consensus

Probab=97.64  E-value=0.00035  Score=57.43  Aligned_cols=133  Identities=13%  Similarity=0.134  Sum_probs=90.6

Q ss_pred             CceeeeeeCC-CceeeeEEeCC--eEEEEe-cCCcEEEEEcCC--------------CCCCCCCcceEEEeCC-------
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQG--RVVCAL-ADGSVAIFRRGP--------------DGQWDLSKYHTVTLGL-------   60 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl-~nG~l~v~~~~~--------------~~~wd~~~~~~i~l~~-------   60 (151)
                      ..++.+++.. |+|.++.+++.  .++++. +|+.|.+|+...              .-+|+. +-..+..++       
T Consensus       177 ~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF~~a~ED~nlY~  255 (433)
T KOG0268|consen  177 DNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNFVAANEDHNLYT  255 (433)
T ss_pred             CCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCc-cccceeecccccccee
Confidence            3467777877 89999999765  355555 899999998752              235765 322333222       


Q ss_pred             ---------------CCCceEEEeee--CCEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEE
Q psy16020         61 ---------------PHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSI  121 (151)
Q Consensus        61 ---------------~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~  121 (151)
                                     +-+.|..+.+.  +.++..|+ +.+|.||...-++- +.. -|+...+.|.++.++-+.- -+|+
T Consensus       256 ~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S-Rdi-YhtkRMq~V~~Vk~S~Dskyi~SG  333 (433)
T KOG0268|consen  256 YDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS-RDI-YHTKRMQHVFCVKYSMDSKYIISG  333 (433)
T ss_pred             hhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc-hhh-hhHhhhheeeEEEEeccccEEEec
Confidence                           12345555554  45555555 66899998775543 222 2666788999999996654 6899


Q ss_pred             cCCCeEEEEeCCccceeeeE
Q psy16020        122 RLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       122 ~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++|+.||||-+.-.+.+.-+
T Consensus       334 Sdd~nvRlWka~Aseklgv~  353 (433)
T KOG0268|consen  334 SDDGNVRLWKAKASEKLGVI  353 (433)
T ss_pred             CCCcceeeeecchhhhcCCC
Confidence            99999999999877766554

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.64  E-value=0.0019  Score=55.29  Aligned_cols=141  Identities=14%  Similarity=0.084  Sum_probs=86.5

Q ss_pred             CCCceeeeeeCCC---ceeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE
Q psy16020          4 PHPTPYPLNKILD---TALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l~~---~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g   78 (151)
                      ...+..|+.++++   .-..-...+++||++.++|.|..++...+ ..|..+......-..+...-+...+.+ ++++++
T Consensus        37 ~~~~~~W~~~~~~~~~~~~sPvv~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~  116 (488)
T cd00216          37 KKLKVAWTFSTGDERGQEGTPLVVDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFG  116 (488)
T ss_pred             hcceeeEEEECCCCCCcccCCEEECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEe
Confidence            4466788888762   12233567889999999999999987542 257554321100000000111233446 899999


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCC--CCce-eEEEEeCCEEEEEE--------cCCCeEEEEeCCccceeeeEeCC
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRR--ESQV-RQMTWAGDGVWVSI--------RLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~--~~~I-~~m~~~~~~vwis~--------~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +. +.|+.+|++|++.+=+++.....  ...+ ....+.+.-+.+..        ..++.|..+|+.|++.+-..+..
T Consensus       117 ~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~  194 (488)
T cd00216         117 TFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTT  194 (488)
T ss_pred             cCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeecc
Confidence            85 69999999999998887754320  0001 11122233333322        24688999999999999988764

The alignment model contains an 8-bladed beta-propeller.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.63  E-value=0.0033  Score=50.57  Aligned_cols=125  Identities=14%  Similarity=0.154  Sum_probs=86.3

Q ss_pred             CCCceeeeeeCCC--ceeeeEEe---------CCeEEEEec---------C-CcEEEEEcCCCC--CCCCCcceEEEeCC
Q psy16020          4 PHPTPYPLNKILD--TALPPVHV---------QGRVVCALA---------D-GSVAIFRRGPDG--QWDLSKYHTVTLGL   60 (151)
Q Consensus         4 ~~~~~l~~i~l~~--~V~~i~~~---------~~~v~vgl~---------n-G~l~v~~~~~~~--~wd~~~~~~i~l~~   60 (151)
                      .+.+.+.++.|++  .|.++...         ..++.||++         . |.|.+|+....+  .+.++.....++  
T Consensus        10 ~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~--   87 (321)
T PF03178_consen   10 TTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEV--   87 (321)
T ss_dssp             TTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEE--
T ss_pred             CCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEee--
Confidence            3566788888884  77777553         246888887         2 999999987531  122222222333  


Q ss_pred             CCCceEEEeeeCCEEEEEeCCeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCe-EEEEeCC
Q psy16020         61 PHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDST-LRMYNAH  133 (151)
Q Consensus        61 ~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~-l~lwd~~  133 (151)
                       +.||++|...+++|.+|.|++|++++.+..+ +.+.-..+..  ..+.+|...++-++++-..++. +.-|+..
T Consensus        88 -~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~--~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~  159 (321)
T PF03178_consen   88 -KGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSP--FYITSLSVFKNYILVGDAMKSVSLLRYDEE  159 (321)
T ss_dssp             -SS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE-BS--SSEEEEEEETTEEEEEESSSSEEEEEEETT
T ss_pred             -cCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheecce--EEEEEEeccccEEEEEEcccCEEEEEEEcc
Confidence             3899999999999999999999999988777 6655554433  3899999999988877766655 3446653

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.58  E-value=0.0053  Score=48.81  Aligned_cols=117  Identities=12%  Similarity=0.135  Sum_probs=75.5

Q ss_pred             CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCce---EEEeeeCCEEEEEeC--
Q psy16020          6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV---RSLAAVYNKVWCGYK--   80 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV---~~m~~v~~~Lw~g~~--   80 (151)
                      -+.+.+++.+..==-|++.+++++++-+...|..++..     +++..+.+++.+...||   +-|..+++.|||-..  
T Consensus       120 l~~~~~~~y~~EGWGLt~dg~~Li~SDGS~~L~~~dP~-----~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~t  194 (264)
T PF05096_consen  120 LKKIGTFPYPGEGWGLTSDGKRLIMSDGSSRLYFLDPE-----TFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQT  194 (264)
T ss_dssp             TEEEEEEE-SSS--EEEECSSCEEEE-SSSEEEEE-TT-----T-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTS
T ss_pred             ceEEEEEecCCcceEEEcCCCEEEEECCccceEEECCc-----ccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCC
Confidence            44555555555444556777788887766677776643     56677777775433555   557778999999996  


Q ss_pred             CeEEEEeCCCCcEEEEEEecC------------CCCCceeEEEEe--CCEEEEEEcCCCeE
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHP------------RRESQVRQMTWA--GDGVWVSIRLDSTL  127 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~------------~~~~~I~~m~~~--~~~vwis~~~d~~l  127 (151)
                      +.|.+||++||+++..+....            ....-.+-+++.  ++..|+++.+=+.+
T Consensus       195 d~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~l  255 (264)
T PF05096_consen  195 DRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKL  255 (264)
T ss_dssp             SEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEE
T ss_pred             CeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCce
Confidence            799999999999999886321            113468999995  66789999875554

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG0290|consensus

Probab=97.57  E-value=0.0014  Score=52.70  Aligned_cols=124  Identities=13%  Similarity=0.139  Sum_probs=82.7

Q ss_pred             CCCceeeeEEeCCeE-----EEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeeeC---CEEEEEe-CC
Q psy16020         14 ILDTALPPVHVQGRV-----VCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAVY---NKVWCGY-KN   81 (151)
Q Consensus        14 l~~~V~~i~~~~~~v-----~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v~---~~Lw~g~-~n   81 (151)
                      +|=+++.|.+.+...     ..|.++-.|.+|+...+.. ++.....+...   ....|+++..-.+   +.+=.++ +-
T Consensus        95 ~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~-~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDT  173 (364)
T KOG0290|consen   95 HPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEES-RVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDT  173 (364)
T ss_pred             CCCCccceEecCCccccCcchhhcccCeEEEEeccCcCC-ceehhhhhccCcccccCCcccccccccCCcceeEeecccC
Confidence            344566666655431     2344466899998864211 11111111111   1238898888764   3344444 45


Q ss_pred             eEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         82 KIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        82 ~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +-.|||.+++   .++.++-+|-   ..|+.+++..  .+++.|++.|+.+|+||.+..+|-..|
T Consensus       174 TCTiWdie~~~~~~vkTQLIAHD---KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTII  235 (364)
T KOG0290|consen  174 TCTIWDIETGVSGTVKTQLIAHD---KEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTII  235 (364)
T ss_pred             eEEEEEEeeccccceeeEEEecC---cceeEEEeccCccceEEEecCCCcEEEEEecccccceEE
Confidence            7889999985   4688899994   5899999996  577999999999999999998887666

>KOG0639|consensus

Probab=97.57  E-value=0.00014  Score=61.96  Aligned_cols=103  Identities=16%  Similarity=0.269  Sum_probs=77.9

Q ss_pred             eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCCCCcEEE
Q psy16020         20 PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKSLVVLK   95 (151)
Q Consensus        20 ~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t~~i~~   95 (151)
                      +|.-..+-.|..++||.|+||+..        +...+ ++..+.--+.|+.+.  +.+||.|- +|.|+.||..++.-..
T Consensus       516 a~spDakvcFsccsdGnI~vwDLh--------nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlq  587 (705)
T KOG0639|consen  516 AISPDAKVCFSCCSDGNIAVWDLH--------NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQ  587 (705)
T ss_pred             hcCCccceeeeeccCCcEEEEEcc--------cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhh
Confidence            333345679999999999999775        32232 454556788999998  57899987 7999999998776433


Q ss_pred             EEEecCCCCCceeEEEEeCCEEEEEEcC-CCeEEEEeCCc
Q psy16020         96 SFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHT  134 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~-d~~l~lwd~~t  134 (151)
                      +   | ++.++|+.+-+++.+=|++.+- .+.+.+-|+..
T Consensus       588 q---h-dF~SQIfSLg~cP~~dWlavGMens~vevlh~sk  623 (705)
T KOG0639|consen  588 Q---H-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSK  623 (705)
T ss_pred             h---h-hhhhhheecccCCCccceeeecccCcEEEEecCC
Confidence            2   3 4567999999999988887764 67788888875

>KOG3914|consensus

Probab=97.51  E-value=0.0012  Score=54.62  Aligned_cols=133  Identities=17%  Similarity=0.112  Sum_probs=86.8

Q ss_pred             eeeeeeCCCceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe--CCe
Q psy16020          8 PYPLNKILDTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY--KNK   82 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~--~n~   82 (151)
                      ++....+|...+.|.+  .+..+.++..-|.+.-|+..+...|.    ....+|. -+-+.-+++.. ++.-+-+  +.+
T Consensus       100 l~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~----~~~~lGh-vSml~dVavS~D~~~IitaDRDEk  174 (390)
T KOG3914|consen  100 LLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR----CEPILGH-VSMLLDVAVSPDDQFIITADRDEK  174 (390)
T ss_pred             eeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC----cchhhhh-hhhhheeeecCCCCEEEEecCCce
Confidence            3333345544444433  23467777777776666653322121    2223443 25556666653 4444444  358


Q ss_pred             EEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         83 IHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        83 I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                      |.|.... +.-++.-+-+|+.   -|..|.+..+..++|++.|++|++||.++++.|.+.|.+....
T Consensus       175 IRvs~ypa~f~IesfclGH~e---FVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L~t~dl~s~~~  238 (390)
T KOG3914|consen  175 IRVSRYPATFVIESFCLGHKE---FVSTISLTDNYLLLSGSGDKTLRLWDITSGKLLDTCDLSSLVI  238 (390)
T ss_pred             EEEEecCcccchhhhccccHh---heeeeeeccCceeeecCCCCcEEEEecccCCcccccchhHhhh
Confidence            9888754 5666666667986   8999999988888899999999999999999999998776544

>KOG0321|consensus

Probab=97.49  E-value=0.0013  Score=57.50  Aligned_cols=126  Identities=12%  Similarity=0.077  Sum_probs=81.3

Q ss_pred             eeCCCceeeeEEeCCe-EEEEec-CCcEEEEEcCCCCC-CCCCcceEEEeCCC---CCceEEEee--eCCEEEEEe-CCe
Q psy16020         12 NKILDTALPPVHVQGR-VVCALA-DGSVAIFRRGPDGQ-WDLSKYHTVTLGLP---HHSVRSLAA--VYNKVWCGY-KNK   82 (151)
Q Consensus        12 i~l~~~V~~i~~~~~~-v~vgl~-nG~l~v~~~~~~~~-wd~~~~~~i~l~~~---~~pV~~m~~--v~~~Lw~g~-~n~   82 (151)
                      -.+.++|+.+.+-++. |..+.+ ||.|.||+....-+ -..+.....++..+   ..-+.|+..  .+.+|++.| +|+
T Consensus       215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s  294 (720)
T KOG0321|consen  215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS  294 (720)
T ss_pred             CceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc
Confidence            3344567777776554 444444 99999998863211 00111111122211   134555555  358899999 689


Q ss_pred             EEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020         83 IHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        83 I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      ||.||..++.  ....|.++.+..-.|..+..-.+.-.+|++-|...++|.+.+.+.
T Consensus       295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~  351 (720)
T KOG0321|consen  295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA  351 (720)
T ss_pred             EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC
Confidence            9999999876  566677777655567776654444488999999999999987654

>KOG2111|consensus

Probab=97.48  E-value=0.0057  Score=49.59  Aligned_cols=112  Identities=10%  Similarity=0.167  Sum_probs=77.7

Q ss_pred             ceeeeEEeCCe---EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEEEeC-C-eEEEEeCC
Q psy16020         17 TALPPVHVQGR---VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGYK-N-KIHVVDPK   89 (151)
Q Consensus        17 ~V~~i~~~~~~---v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~g~~-n-~I~vid~~   89 (151)
                      -.-++.+..+.   +|=|.--|+|-+.+......   ..|..|+-.+  ++|.||++. .+. |..|+. + -|+|||++
T Consensus       138 GlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~---~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~  212 (346)
T KOG2111|consen  138 GLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKP---NAPSIINAHD--SDIACVALNLQGTLVATASTKGTLIRIFDTE  212 (346)
T ss_pred             ceEeecCCCCceEEEcCCCccceEEEEEhhhcCc---CCceEEEccc--CceeEEEEcCCccEEEEeccCcEEEEEEEcC
Confidence            34444444332   44456667777777653211   1456666655  999999997 344 555553 4 59999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCCEEEEEE-cCCCeEEEEeCCc
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHT  134 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~-~~d~~l~lwd~~t  134 (151)
                      +++..++|.-..+ ...|.+|+++++..|++. ++-++|.+|-.+.
T Consensus       213 ~g~~l~E~RRG~d-~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  213 DGTLLQELRRGVD-RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             CCcEeeeeecCCc-hheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence            9999999875443 357999999999987665 4568999998774

>KOG0321|consensus

Probab=97.47  E-value=0.00039  Score=60.55  Aligned_cols=104  Identities=13%  Similarity=0.098  Sum_probs=71.1

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCCcEEEE--EEecC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLVVLKS--FDAHP  101 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~~i~~~--~~~h~  101 (151)
                      .+|+|..+|.|..|+...... .++......---+..-|.-+.-+.  .+|--++|+ +|+.||.++.++...  +-+|+
T Consensus        66 iLavadE~G~i~l~dt~~~~f-r~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~  144 (720)
T KOG0321|consen   66 ILAVADEDGGIILFDTKSIVF-RLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHT  144 (720)
T ss_pred             eEEEecCCCceeeecchhhhc-chhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccc
Confidence            499999999999998763210 111110000001124444444442  456667776 799999999988877  88998


Q ss_pred             CCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020        102 RRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus       102 ~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t  134 (151)
                      .   +|..+++.  +..|++++++|+.+.|||.+-
T Consensus       145 ~---SvkS~cf~~~n~~vF~tGgRDg~illWD~R~  176 (720)
T KOG0321|consen  145 G---SVKSECFMPTNPAVFCTGGRDGEILLWDCRC  176 (720)
T ss_pred             c---ccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence            5   66666665  568899999999999999984

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=97.47  E-value=0.022  Score=45.72  Aligned_cols=124  Identities=12%  Similarity=0.130  Sum_probs=73.5

Q ss_pred             ceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEE--eCCCCCceEEEeeeC--CEEEEEeC--CeEEEEe
Q psy16020         17 TALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT--LGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVD   87 (151)
Q Consensus        17 ~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~--l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid   87 (151)
                      .+.++...+  +++|++. .++.|.+|+...+|.........+.  .|.  . .+.|.+..  ..||+++.  |+|.+||
T Consensus       127 ~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~--~-p~~~~~~pdg~~lyv~~~~~~~v~v~~  203 (330)
T PRK11028        127 GCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGA--G-PRHMVFHPNQQYAYCVNELNSSVDVWQ  203 (330)
T ss_pred             cccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCC--C-CceEEECCCCCEEEEEecCCCEEEEEE
Confidence            345554443  4787655 4589999998765532211112222  333  3 46777764  47999984  7899999


Q ss_pred             CC--CC--cEEEEEEecCCC---CCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc----cceeeeEeC
Q psy16020         88 PK--SL--VVLKSFDAHPRR---ESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT----YQHLQDVDI  143 (151)
Q Consensus        88 ~~--t~--~i~~~~~~h~~~---~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t----~~~l~~idi  143 (151)
                      .+  ++  +..+++..++..   ......|.++++  .++++.+.++.|.+||..+    .+..+.+..
T Consensus       204 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~  272 (330)
T PRK11028        204 LKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT  272 (330)
T ss_pred             EeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec
Confidence            76  33  445555543321   122335666655  4577777899999999743    344555543

>KOG4547|consensus

Probab=97.43  E-value=0.0031  Score=54.28  Aligned_cols=106  Identities=11%  Similarity=0.144  Sum_probs=81.8

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR  103 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~  103 (151)
                      .+.-|..+|.|..|+..+++     ....+.-+.+..+|+++.-..  +.+|-+.+ .++..|+.++.++.+.+.+.+. 
T Consensus        72 ~lvlgt~~g~v~~ys~~~g~-----it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~-  145 (541)
T KOG4547|consen   72 MLVLGTPQGSVLLYSVAGGE-----ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKP-  145 (541)
T ss_pred             EEEeecCCccEEEEEecCCe-----EEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCC-
Confidence            47778889999999986543     223344455569999988654  45664444 5899999999999999998875 


Q ss_pred             CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020        104 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       104 ~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                        .+..++.+++| =+...-+..|++||.++.|.++.+
T Consensus       146 --~~~sl~is~D~-~~l~~as~~ik~~~~~~kevv~~f  180 (541)
T KOG4547|consen  146 --LVSSLCISPDG-KILLTASRQIKVLDIETKEVVITF  180 (541)
T ss_pred             --ccceEEEcCCC-CEEEeccceEEEEEccCceEEEEe
Confidence              78888999885 345556789999999999999887

>KOG1275|consensus

Probab=97.42  E-value=0.00093  Score=60.43  Aligned_cols=105  Identities=14%  Similarity=0.305  Sum_probs=79.2

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRES  105 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~  105 (151)
                      .+..|.---.++.|+.+.     ....+...++.  ..|.=|-..+..+.||.. ++|.+-|+++.+.+++|.+|++   
T Consensus       149 ~~i~Gg~Q~~li~~Dl~~-----~~e~r~~~v~a--~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~---  218 (1118)
T KOG1275|consen  149 TLIMGGLQEKLIHIDLNT-----EKETRTTNVSA--SGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG---  218 (1118)
T ss_pred             ceeecchhhheeeeeccc-----ceeeeeeeccC--CceEEEEecCcEEEeecccceEEeecCCcCceeeeeecccc---
Confidence            344443344677777652     23444556665  447777778888999995 7999999999999999999987   


Q ss_pred             ceeEEEEeCCEEEEEEcC---------CCeEEEEeCCccceeeeEe
Q psy16020        106 QVRQMTWAGDGVWVSIRL---------DSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       106 ~I~~m~~~~~~vwis~~~---------d~~l~lwd~~t~~~l~~id  142 (151)
                      +|..+.+.|+- ++||+-         |+.|++||.+..+.+.-|.
T Consensus       219 siSDfDv~GNl-LitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~  263 (1118)
T KOG1275|consen  219 SISDFDVQGNL-LITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ  263 (1118)
T ss_pred             ceeeeeccCCe-EEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence            89999987776 666654         7789999999988877664

>KOG1408|consensus

Probab=97.42  E-value=0.0025  Score=56.72  Aligned_cols=121  Identities=20%  Similarity=0.241  Sum_probs=84.7

Q ss_pred             CCceeeeEEeCC----eEEEEecCCcEEEEEcC---CCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEE
Q psy16020         15 LDTALPPVHVQG----RVVCALADGSVAIFRRG---PDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIH   84 (151)
Q Consensus        15 ~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~---~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~   84 (151)
                      .++|+++++..+    +.+...||-.| .|+..   .+|.  +-...+-.++.  ..+.-|.+-.  +.+..+|.+ +|.
T Consensus       547 SssITsvKFa~~gln~~MiscGADksi-mFr~~qk~~~g~--~f~r~t~t~~k--tTlYDm~Vdp~~k~v~t~cQDrnir  621 (1080)
T KOG1408|consen  547 SSSITSVKFACNGLNRKMISCGADKSI-MFRVNQKASSGR--LFPRHTQTLSK--TTLYDMAVDPTSKLVVTVCQDRNIR  621 (1080)
T ss_pred             ccceeEEEEeecCCceEEEeccCchhh-heehhccccCce--ecccccccccc--ceEEEeeeCCCcceEEEEecccceE
Confidence            468888888533    46666666543 33322   2231  11111223333  6777777743  678899976 799


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc-CCCeEEEEeCCccceeee
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~-~d~~l~lwd~~t~~~l~~  140 (151)
                      |||+++++..++|.+..+.+...--+..++.|++++++ .|-+|.+||--++|++..
T Consensus       622 if~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~  678 (1080)
T KOG1408|consen  622 IFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQ  678 (1080)
T ss_pred             EEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhh
Confidence            99999999999999987776777777888999976665 588999999999998764

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=97.40  E-value=0.017  Score=47.40  Aligned_cols=135  Identities=15%  Similarity=0.102  Sum_probs=89.5

Q ss_pred             CCCCceeeeeeCCC----ceee--eEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcce-EEEeCCCCCceEEEeeeCCE
Q psy16020          3 YPHPTPYPLNKILD----TALP--PVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYH-TVTLGLPHHSVRSLAAVYNK   74 (151)
Q Consensus         3 ~~~~~~l~~i~l~~----~V~~--i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~-~i~l~~~~~pV~~m~~v~~~   74 (151)
                      ..+.+.+|+.++..    ....  ..+.++.+|++..+|.|..++..... .|...... .-.++   .|+.   ..+++
T Consensus        40 ~~~g~~~W~~~~~~~~~~~~~~~~~~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~---~~~~---~~~G~  113 (370)
T COG1520          40 NTSGTLLWSVSLGSGGGGIYAGPAPADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLS---GPIL---GSDGK  113 (370)
T ss_pred             ccCcceeeeeecccCccceEeccccEeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceecc---CceE---EeCCe
Confidence            44566777765442    2222  36678899999999999999876544 47554332 11221   3322   22788


Q ss_pred             EEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         75 VWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        75 Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ||+|..+ ++|++|+++++.+-++.... ..............||... .++.+...|..|++..-+.+..+
T Consensus       114 i~~g~~~g~~y~ld~~~G~~~W~~~~~~-~~~~~~~~v~~~~~v~~~s-~~g~~~al~~~tG~~~W~~~~~~  183 (370)
T COG1520         114 IYVGSWDGKLYALDASTGTLVWSRNVGG-SPYYASPPVVGDGTVYVGT-DDGHLYALNADTGTLKWTYETPA  183 (370)
T ss_pred             EEEecccceEEEEECCCCcEEEEEecCC-CeEEecCcEEcCcEEEEec-CCCeEEEEEccCCcEEEEEecCC
Confidence            9999976 59999999999988888775 1112233333344444333 88999999999999988877654

>KOG1538|consensus

Probab=97.40  E-value=0.0005  Score=60.55  Aligned_cols=68  Identities=18%  Similarity=0.293  Sum_probs=61.3

Q ss_pred             CceEEEeee--CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020         63 HSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~  133 (151)
                      +.|..+++.  +.+|-.+.|++++++|+..|...+++.+|.|   .|.|++++.+|- +.|++.|-.+.+|...
T Consensus        13 hci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKD---tVycVAys~dGkrFASG~aDK~VI~W~~k   83 (1081)
T KOG1538|consen   13 HCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKD---TVYCVAYAKDGKRFASGSADKSVIIWTSK   83 (1081)
T ss_pred             cchheeEECCCCceEEEecCCEEEEEeCCCcccccccccccc---eEEEEEEccCCceeccCCCceeEEEeccc
Confidence            466677775  4789999999999999999999999999998   999999998877 9999999999999876

>KOG4328|consensus

Probab=97.40  E-value=0.00074  Score=56.84  Aligned_cols=108  Identities=16%  Similarity=0.217  Sum_probs=78.5

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEEEeCCCCcEEEE--EE
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPKSLVVLKS--FD   98 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~t~~i~~~--~~   98 (151)
                      +..|+.|.--|...+|++..+|.    +...+.+..  ..|+.|+++.  ..+.+.+  +....|||++.+.-+++  +.
T Consensus       291 ~~~vl~~~~~G~f~~iD~R~~~s----~~~~~~lh~--kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~ls  364 (498)
T KOG4328|consen  291 SRSVLFGDNVGNFNVIDLRTDGS----EYENLRLHK--KKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLS  364 (498)
T ss_pred             CccEEEeecccceEEEEeecCCc----cchhhhhhh--cccceeecCCCCchheeecccCcceeeeehhhhcCCCCccee
Confidence            44577777678888888876663    344556655  7899999874  4444444  46899999998887665  22


Q ss_pred             --ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC----CccceeeeE
Q psy16020         99 --AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA----HTYQHLQDV  141 (151)
Q Consensus        99 --~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~----~t~~~l~~i  141 (151)
                        .|.   .+|+...+++.+- +++...|+.||+||.    ...+++.+|
T Consensus       365 t~~Hr---rsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I  411 (498)
T KOG4328|consen  365 TLPHR---RSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTI  411 (498)
T ss_pred             ccccc---ceeeeeEEcCCCCceEeeccCCceEEeecccccccCCcccee
Confidence              354   4899999986544 889999999999999    456666666

>KOG0270|consensus

Probab=97.38  E-value=0.0063  Score=51.14  Aligned_cols=122  Identities=11%  Similarity=0.075  Sum_probs=87.8

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEE
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~L   75 (151)
                      .++.+|-.++... +.|.++.+++.   .+..|..||++++++...-+    ......++-   .-|-.++..   ++..
T Consensus       273 ~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~----~s~~~wk~~---g~VEkv~w~~~se~~f  345 (463)
T KOG0270|consen  273 VDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPS----NSGKEWKFD---GEVEKVAWDPHSENSF  345 (463)
T ss_pred             cCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcc----ccCceEEec---cceEEEEecCCCceeE
Confidence            3566777888744 79999988754   68999999999999875211    111222332   334444442   2456


Q ss_pred             EEEeC-CeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020         76 WCGYK-NKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t  134 (151)
                      .||.+ +.+|=+|++.. +...++.+|.+   .|..+.+.+.  +...+.+.|.+++||+..-
T Consensus       346 ~~~tddG~v~~~D~R~~~~~vwt~~AHd~---~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~  405 (463)
T KOG0270|consen  346 FVSTDDGTVYYFDIRNPGKPVWTLKAHDD---EISGLSVNIQTPGLLSTASTDKVVKLWKFDV  405 (463)
T ss_pred             EEecCCceEEeeecCCCCCceeEEEeccC---CcceEEecCCCCcceeeccccceEEEEeecC
Confidence            67775 69999999965 89999999965   8888888743  6688999999999999873

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.38  E-value=0.0077  Score=54.48  Aligned_cols=142  Identities=12%  Similarity=0.107  Sum_probs=84.6

Q ss_pred             CCCCceeeeeeCCCce-----------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee
Q psy16020          3 YPHPTPYPLNKILDTA-----------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA   70 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V-----------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~   70 (151)
                      +..-+..|+.+..+..           ..-...++.||++..+|.|..++...+. .|.++......-+......|.+.+
T Consensus       161 V~~L~~aWt~~tGd~~~~~~~~~~~~e~TPlvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay  240 (764)
T TIGR03074       161 VGNLKVAWTYHTGDLKTPDDPGEATFQATPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSY  240 (764)
T ss_pred             ccCceEEEEEECCCccccccccccccccCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEE
Confidence            4455667777665421           1123358899999999999999976433 475543221111000011222333


Q ss_pred             ------------------eCCEEEEEe-CCeEEEEeCCCCcEEEEEEecCC------------CCCceeE-EEEeCCEEE
Q psy16020         71 ------------------VYNKVWCGY-KNKIHVVDPKSLVVLKSFDAHPR------------RESQVRQ-MTWAGDGVW  118 (151)
Q Consensus        71 ------------------v~~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~------------~~~~I~~-m~~~~~~vw  118 (151)
                                        .+++|+.+. +++++.+|++|++..-.|.....            ..-.++. -.+.++.|.
T Consensus       241 ~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VI  320 (764)
T TIGR03074       241 YDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVV  320 (764)
T ss_pred             ecCCcccccccccccccccCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEE
Confidence                              235899887 56999999999999887753210            0000111 122244555


Q ss_pred             EEEc---------CCCeEEEEeCCccceeeeEeCC
Q psy16020        119 VSIR---------LDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       119 is~~---------~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +..+         -++.|+-+|++|++++-..+..
T Consensus       321 vG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g  355 (764)
T TIGR03074       321 IGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPG  355 (764)
T ss_pred             EEecccccccccCCCcEEEEEECCCCcEeeEEecC
Confidence            4322         2789999999999999999864

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG1517|consensus

Probab=97.37  E-value=0.0026  Score=58.52  Aligned_cols=117  Identities=15%  Similarity=0.143  Sum_probs=82.9

Q ss_pred             CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC---CCce---EEEee----eCCEEEEEeCC
Q psy16020         16 DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSV---RSLAA----VYNKVWCGYKN   81 (151)
Q Consensus        16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV---~~m~~----v~~~Lw~g~~n   81 (151)
                      ..|.+|.+.++    -+.+|..||.|.||+.-.++ |  +.++.++--.+   ..|.   ..|++    -.+.|.++.+.
T Consensus      1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~-~--~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~ 1186 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADK-W--KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDV 1186 (1387)
T ss_pred             CccceeeeecccchhheeeeccCceEEEecccccc-c--CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCe
Confidence            47888888765    39999999999999865443 3  34554432110   1111   11222    14789988875


Q ss_pred             -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccce
Q psy16020         82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                       .|.|||++.-++.+.+...++  ..|+.|..+  +.++.+++-.||.||+||.+.-.+
T Consensus      1187 r~IRIWDa~~E~~~~diP~~s~--t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ 1243 (1387)
T KOG1517|consen 1187 RSIRIWDAHKEQVVADIPYGSS--TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP 1243 (1387)
T ss_pred             eEEEEEecccceeEeecccCCC--ccceeecccccCCceEEEeecCCceEEeecccCCc
Confidence             599999999999888886654  689988776  446788999999999999996444

>KOG2055|consensus

Probab=97.31  E-value=0.0052  Score=51.97  Aligned_cols=104  Identities=9%  Similarity=0.102  Sum_probs=71.6

Q ss_pred             eEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEE
Q psy16020         21 PVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSF   97 (151)
Q Consensus        21 i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~   97 (151)
                      +.+..+.+..++-+|.|.+-.-.. +    +....+++.   ..|+.+.+.  +.+||+.|+ +.|+|||.+..+++++|
T Consensus       311 VShd~~fia~~G~~G~I~lLhakT-~----eli~s~Kie---G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf  382 (514)
T KOG2055|consen  311 VSHDSNFIAIAGNNGHIHLLHAKT-K----ELITSFKIE---GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRF  382 (514)
T ss_pred             ecCCCCeEEEcccCceEEeehhhh-h----hhhheeeec---cEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEE
Confidence            345566777777789888876532 1    122344553   677788775  356998886 69999999999999999


Q ss_pred             EecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020         98 DAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t  134 (151)
                      ...-  .-.=++++.+.++- +.++++++.|.+||-.+
T Consensus       383 ~D~G--~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s  418 (514)
T KOG2055|consen  383 VDDG--SVHGTSLCISLNGSYLATGSDSGIVNIYDGNS  418 (514)
T ss_pred             eecC--ccceeeeeecCCCceEEeccCcceEEEeccch
Confidence            8542  12334455554544 67788899999999553

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.27  E-value=0.056  Score=42.13  Aligned_cols=126  Identities=7%  Similarity=0.044  Sum_probs=81.7

Q ss_pred             ceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC----------CCCceEEEeeeCCEEE
Q psy16020          7 TPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL----------PHHSVRSLAAVYNKVW   76 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~----------~~~pV~~m~~v~~~Lw   76 (151)
                      +.++++.+|+.+.+|.+.++.+++|..+| ..+++...+..-     .....++          ...|+....+.++++-
T Consensus       130 ~~~ke~~lp~~~~~i~~~~~~i~v~~~~~-f~~idl~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~L  203 (275)
T PF00780_consen  130 KLLKEISLPDPPSSIAFLGNKICVGTSKG-FYLIDLNTGSPS-----ELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFL  203 (275)
T ss_pred             ceeEEEEcCCCcEEEEEeCCEEEEEeCCc-eEEEecCCCCce-----EEeCccCCcchhhhcccCCCceEEEEeCCceEE
Confidence            67899999999999999999999999554 677776532211     1111111          1145544444556666


Q ss_pred             EEeCCeEEEEeCCCCcEEE--EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         77 CGYKNKIHVVDPKSLVVLK--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        77 ~g~~n~I~vid~~t~~i~~--~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ..+++.-..+|. .|+..+  +++=    ...+..+++....+. .+.. ..|.+|+..+++++|.|+...
T Consensus       204 l~~~~~g~fv~~-~G~~~r~~~i~W----~~~p~~~~~~~pyli-~~~~-~~iEV~~~~~~~lvQ~i~~~~  267 (275)
T PF00780_consen  204 LCYDNIGVFVNK-NGEPSRKSTIQW----SSAPQSVAYSSPYLI-AFSS-NSIEVRSLETGELVQTIPLPN  267 (275)
T ss_pred             EEecceEEEEcC-CCCcCcccEEEc----CCchhEEEEECCEEE-EECC-CEEEEEECcCCcEEEEEECCC
Confidence            666665445554 455444  2321    136677777777644 4544 459999999999999998654

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1009|consensus

Probab=97.27  E-value=0.0069  Score=50.47  Aligned_cols=126  Identities=17%  Similarity=0.231  Sum_probs=88.9

Q ss_pred             CCCceeeeEEeCC---eEEEEecCCcEEEEEcCCC--CCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe--CCeEEE
Q psy16020         14 ILDTALPPVHVQG---RVVCALADGSVAIFRRGPD--GQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY--KNKIHV   85 (151)
Q Consensus        14 l~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~--~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~--~n~I~v   85 (151)
                      -+.+|.++.+.+|   ++..|++|-.|.+|....+  +.=+.+.-..=.|+.+...|+++-+.. +.|-+++  ++.|++
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l   91 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL   91 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence            3468888888655   6788888889999977532  110111111224566679999999974 4454444  357888


Q ss_pred             EeCC--------C--------CcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         86 VDPK--------S--------LVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        86 id~~--------t--------~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |-..        +        ..+.+.+-+|.+   -|..+..++++- .++.+-|+.+++||+.+++.++..|
T Consensus        92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~---diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~  162 (434)
T KOG1009|consen   92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRD---DIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILD  162 (434)
T ss_pred             EEecCcCCccccchhhhCccceEEEEEeccccc---chhhhhccCCCceeeeeeccceEEEEEeccceeEeecc
Confidence            8654        3        456667777754   688888887766 7899999999999999999988775

>KOG1274|consensus

Probab=97.25  E-value=0.0055  Score=55.36  Aligned_cols=104  Identities=17%  Similarity=0.216  Sum_probs=80.3

Q ss_pred             EEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEeCCCCc---EEEEE
Q psy16020         22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVDPKSLV---VLKSF   97 (151)
Q Consensus        22 ~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid~~t~~---i~~~~   97 (151)
                      ...++.++++.+||.|.+|.-..    |.+.|..+....  .+|.+++...+++-.|+ +|.|.++.-.+++   ++.+|
T Consensus        22 d~~gefi~tcgsdg~ir~~~~~s----d~e~P~ti~~~g--~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rf   95 (933)
T KOG1274|consen   22 DPDGEFICTCGSDGDIRKWKTNS----DEEEPETIDISG--ELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARF   95 (933)
T ss_pred             cCCCCEEEEecCCCceEEeecCC----cccCCchhhccC--ceeEEEeecccceEEeeccceEEEeeCCCCCccceeeee
Confidence            33566899999999999998764    337888888544  89999999998888888 4789888877766   44555


Q ss_pred             EecCCCCCceeEEEEeCCEEEE-EEcCCCeEEEEeCCccce
Q psy16020         98 DAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~vwi-s~~~d~~l~lwd~~t~~~  137 (151)
                      +      -++++++++++|-|+ .++.|-.|++-+..+...
T Consensus        96 t------lp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~  130 (933)
T KOG1274|consen   96 T------LPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ  130 (933)
T ss_pred             e------ccceEEEEecCCcEEEeecCceeEEEEeccccch
Confidence            5      378999999998865 556678888888775443

>KOG4378|consensus

Probab=97.24  E-value=0.0014  Score=56.05  Aligned_cols=106  Identities=10%  Similarity=0.053  Sum_probs=78.4

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC--EEEEEe-CCeEEEEeCCCCcEEEEEEecCCC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGY-KNKIHVVDPKSLVVLKSFDAHPRR  103 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~--~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~  103 (151)
                      ++..|..+|.|.+|+..+       ...+-.+-+++..|+||.+..+  .|..++ |+-|.|.++.|++--.+|. |. .
T Consensus        93 y~~sgG~~~~Vkiwdl~~-------kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~-~~-s  163 (673)
T KOG4378|consen   93 YEISGGQSGCVKIWDLRA-------KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT-ID-S  163 (673)
T ss_pred             eeeccCcCceeeehhhHH-------HHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee-cC-C
Confidence            567777788888876542       1122356677899999999853  465555 5789999999999888888 43 2


Q ss_pred             CCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020        104 ESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       104 ~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+.|..+.++..  ..+.+.++++.+.|||+..-.+....
T Consensus       164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~  203 (673)
T KOG4378|consen  164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA  203 (673)
T ss_pred             CCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccch
Confidence            467889998855  45889999999999999876555443

>KOG0974|consensus

Probab=97.24  E-value=0.0044  Score=56.44  Aligned_cols=110  Identities=12%  Similarity=0.099  Sum_probs=76.2

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee---CCEEEEEeC---CeEEEEeCCCCcEEEEE
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV---YNKVWCGYK---NKIHVVDPKSLVVLKSF   97 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v---~~~Lw~g~~---n~I~vid~~t~~i~~~~   97 (151)
                      ++++++++.+..+.+++.+  +.|-     ..++. +...+.-++...   .+++++++|   |.|++|++.--..-..+
T Consensus        99 ~k~i~l~~~~ns~~i~d~~--~~~~-----~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l  171 (967)
T KOG0974|consen   99 NKKIALVTSRNSLLIRDSK--NSSV-----LSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRL  171 (967)
T ss_pred             cceEEEEEcCceEEEEecc--cCce-----ehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCccee
Confidence            4578888888889998865  2221     11222 112444555554   478888887   78999998822222257


Q ss_pred             EecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         98 DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .+|..   .|+.|..+.+| ..+|+++|.++|+|+..+.+.+.--.+.
T Consensus       172 ~GHeG---~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg  216 (967)
T KOG0974|consen  172 KGHEG---SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG  216 (967)
T ss_pred             cccCC---ceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc
Confidence            88964   99999997544 4889999999999999998877643333

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=97.23  E-value=0.0077  Score=45.47  Aligned_cols=97  Identities=16%  Similarity=0.310  Sum_probs=66.4

Q ss_pred             CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeE
Q psy16020         35 GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQ  109 (151)
Q Consensus        35 G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~  109 (151)
                      |...+|..+..+    .+...+++.. ..||..+.-.  ++++.+.+|   .+|.+||.+ ++...+|..     .+++.
T Consensus        37 ~~~~l~~~~~~~----~~~~~i~l~~-~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~-----~~~n~  105 (194)
T PF08662_consen   37 GEFELFYLNEKN----IPVESIELKK-EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGT-----QPRNT  105 (194)
T ss_pred             eeEEEEEEecCC----CccceeeccC-CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecC-----CCceE
Confidence            556777764322    2335566654 3689999886  467766654   479999997 555566652     37789


Q ss_pred             EEEeCCEEEEEE-c---CCCeEEEEeCCccceeeeEe
Q psy16020        110 MTWAGDGVWVSI-R---LDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       110 m~~~~~~vwis~-~---~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.+++.|-++.. +   -.+.|++||.++.+.+.+.+
T Consensus       106 i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~  142 (194)
T PF08662_consen  106 ISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE  142 (194)
T ss_pred             EEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc
Confidence            999977754333 2   24679999999999988874

>KOG1517|consensus

Probab=97.21  E-value=0.0082  Score=55.42  Aligned_cols=119  Identities=14%  Similarity=0.124  Sum_probs=77.6

Q ss_pred             ceeeeE---EeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeee--C-CEEEEEeC-CeEEEE
Q psy16020         17 TALPPV---HVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAV--Y-NKVWCGYK-NKIHVV   86 (151)
Q Consensus        17 ~V~~i~---~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v--~-~~Lw~g~~-n~I~vi   86 (151)
                      .|++|.   .++|.+.+|.+||.|.+|++.-...   +  ..+..   +...+||..+.+-  + ++|..||. +.|+++
T Consensus      1210 ~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~---d--s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~ 1284 (1387)
T KOG1517|consen 1210 LVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP---D--SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLL 1284 (1387)
T ss_pred             cceeecccccCCceEEEeecCCceEEeecccCCc---c--ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEE
Confidence            455553   2468899999999999999863211   1  12222   2223557666664  2 57999995 699999


Q ss_pred             eCCCCcEEEE--EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         87 DPKSLVVLKS--FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        87 d~~t~~i~~~--~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |++.-..+..  +..|-+-++..++|.+-...=.++++....|++|+.. ++.+..|
T Consensus      1285 DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy~~~-G~~l~~~ 1340 (1387)
T KOG1517|consen 1285 DLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIYSLS-GEQLNII 1340 (1387)
T ss_pred             ecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEEecC-hhhhccc
Confidence            9986332222  3334333345888888766555666666999999998 6666655

>KOG0290|consensus

Probab=97.20  E-value=0.0066  Score=48.92  Aligned_cols=110  Identities=17%  Similarity=0.240  Sum_probs=76.8

Q ss_pred             CceeeeEEeC--CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeeeC-CE----EEEEeCCeEEE
Q psy16020         16 DTALPPVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAVY-NK----VWCGYKNKIHV   85 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v~-~~----Lw~g~~n~I~v   85 (151)
                      ..|++|.+.+  -++|++ .+||++.+|+...     ++. ..|-..+  +..|.-.+.-.. +-    ..+.-.++|.+
T Consensus       197 KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~-----leH-STIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~i  270 (364)
T KOG0290|consen  197 KEVYDIAFLKGSRDVFASVGADGSVRMFDLRS-----LEH-STIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVI  270 (364)
T ss_pred             cceeEEEeccCccceEEEecCCCcEEEEEecc-----ccc-ceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEE
Confidence            5899999987  468876 4699999999862     221 2222222  125555555443 11    12233578999


Q ss_pred             EeCCC-CcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020         86 VDPKS-LVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        86 id~~t-~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t  134 (151)
                      +|.+. .....++..|..   .|+.++..+.  ...+|+++|...-+||..+
T Consensus       271 LDiR~P~tpva~L~~H~a---~VNgIaWaPhS~~hictaGDD~qaliWDl~q  319 (364)
T KOG0290|consen  271 LDIRVPCTPVARLRNHQA---SVNGIAWAPHSSSHICTAGDDCQALIWDLQQ  319 (364)
T ss_pred             EEecCCCcceehhhcCcc---cccceEecCCCCceeeecCCcceEEEEeccc
Confidence            99885 568888999974   8999999854  4488999999999999985

>KOG1407|consensus

Probab=97.16  E-value=0.011  Score=46.97  Aligned_cols=74  Identities=15%  Similarity=0.239  Sum_probs=56.4

Q ss_pred             eEEEeee-CCEEE-EEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020         65 VRSLAAV-YNKVW-CGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        65 V~~m~~v-~~~Lw-~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      ++-+... .+.++ .-.| +.|.|+.=.+++.++++.+|+.   .-.|+++++.|- +.+++-|+.+.|||+...-++..
T Consensus       150 ~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s---nCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~  226 (313)
T KOG1407|consen  150 VNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS---NCICIEFDPDGRYFATGSADALVSLWDVDELICERC  226 (313)
T ss_pred             eeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCc---ceEEEEECCCCceEeeccccceeeccChhHhhhhee
Confidence            3444443 45555 4457 6899998889999999999973   677888888887 78888999999999997655554


Q ss_pred             E
Q psy16020        141 V  141 (151)
Q Consensus       141 i  141 (151)
                      |
T Consensus       227 i  227 (313)
T KOG1407|consen  227 I  227 (313)
T ss_pred             e
Confidence            4

>KOG0303|consensus

Probab=97.10  E-value=0.0072  Score=50.40  Aligned_cols=120  Identities=18%  Similarity=0.266  Sum_probs=80.7

Q ss_pred             CceeeeEEeC-------------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC
Q psy16020         16 DTALPPVHVQ-------------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK   80 (151)
Q Consensus        16 ~~V~~i~~~~-------------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~   80 (151)
                      .+|.+|..+.             |-++.+.+|.++.+|+...+.       ..+.+. ++--|.+|.+.  ++.+..+|.
T Consensus       122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tge-------ali~l~-hpd~i~S~sfn~dGs~l~Ttck  193 (472)
T KOG0303|consen  122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGE-------ALITLD-HPDMVYSMSFNRDGSLLCTTCK  193 (472)
T ss_pred             cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCc-------eeeecC-CCCeEEEEEeccCCceeeeecc
Confidence            4666665553             346677778888888765322       355666 34778888886  467888887


Q ss_pred             C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc----CCCeEEEEeCCccc---eeeeEeCCc
Q psy16020         81 N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR----LDSTLRMYNAHTYQ---HLQDVDIEP  145 (151)
Q Consensus        81 n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~----~d~~l~lwd~~t~~---~l~~idi~~  145 (151)
                      + +|.|||+.+++++..-.+|.-  ..-....+.++|-..+.+    .+..+-|||....+   -++++|-+.
T Consensus       194 DKkvRv~dpr~~~~v~e~~~heG--~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSn  264 (472)
T KOG0303|consen  194 DKKVRVIDPRRGTVVSEGVAHEG--AKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSN  264 (472)
T ss_pred             cceeEEEcCCCCcEeeecccccC--CCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCC
Confidence            5 799999999999999888863  233334445555544443    46789999998643   345555443

>KOG2321|consensus

Probab=97.05  E-value=0.01  Score=51.57  Aligned_cols=124  Identities=11%  Similarity=0.125  Sum_probs=89.1

Q ss_pred             eeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeE
Q psy16020          9 YPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKI   83 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I   83 (151)
                      -..+++|..=.+|+|+.-  -+|+|.+.-.|.-|.. ..|+|  =.  .+.+-.  .+++++.+.+  +-|.||. .+.|
T Consensus       127 hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNL-EqGrf--L~--P~~~~~--~~lN~v~in~~hgLla~Gt~~g~V  199 (703)
T KOG2321|consen  127 HYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNL-EQGRF--LN--PFETDS--GELNVVSINEEHGLLACGTEDGVV  199 (703)
T ss_pred             eeeeecCcCCccccccCCCccEEEeecCcceEEEEc-ccccc--cc--cccccc--ccceeeeecCccceEEecccCceE
Confidence            346788888888888643  4888887666666654 34544  12  223323  7888888875  5577777 5799


Q ss_pred             EEEeCCCCcEEEEEEecCC--------CCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceee
Q psy16020         84 HVVDPKSLVVLKSFDAHPR--------RESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~--------~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~  139 (151)
                      -.||+.+.+...++++-+.        ....|+++.+.++|+ ..-+..++.+.+||.++.+++.
T Consensus       200 EfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~  264 (703)
T KOG2321|consen  200 EFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLL  264 (703)
T ss_pred             EEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCcee
Confidence            9999999998888875432        233599999999899 5566678999999999987764

>KOG1034|consensus

Probab=97.03  E-value=0.0067  Score=49.51  Aligned_cols=107  Identities=12%  Similarity=0.144  Sum_probs=75.0

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCcEEEEEE---e
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLVVLKSFD---A   99 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~---~   99 (151)
                      .+-+|+.-|.|.|++..+...    ....+..   ...|+.+-...   +-|-+|+. ..|.+||.++..+...|-   +
T Consensus       107 ~la~~G~~GvIrVid~~~~~~----~~~~~gh---G~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~eg  179 (385)
T KOG1034|consen  107 FLAAGGYLGVIRVIDVVSGQC----SKNYRGH---GGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEG  179 (385)
T ss_pred             eEEeecceeEEEEEecchhhh----ccceecc---CccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccccc
Confidence            455666678999998753211    1112222   36777777764   23556665 489999999999888765   6


Q ss_pred             cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        100 HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       100 h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |.+   .|-.+.++++|- .+|++-|-.|++|+..+.+.-..|..
T Consensus       180 Hrd---eVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~  221 (385)
T KOG1034|consen  180 HRD---EVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLEL  221 (385)
T ss_pred             ccC---cEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhh
Confidence            765   899999987766 88999999999999996555554443

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.01  E-value=0.022  Score=48.76  Aligned_cols=107  Identities=19%  Similarity=0.109  Sum_probs=69.0

Q ss_pred             eEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEE-------------------eCCeEEEE
Q psy16020         27 RVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG-------------------YKNKIHVV   86 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g-------------------~~n~I~vi   86 (151)
                      .||+|..+|.|..+++..+. .|..+..    ...       +....+.++++                   ..++++.+
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~----~~~-------~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~Al  371 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEV----EQP-------MAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAAL  371 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEee----ccc-------cccCCceEEEccccccccCcccccCCCCCCCceEEEEE
Confidence            59999999999999986533 3643221    000       11112445543                   24689999


Q ss_pred             eCCCCcEEEEEEecCCC-------CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         87 DPKSLVVLKSFDAHPRR-------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        87 d~~t~~i~~~~~~h~~~-------~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      |++|++++=+.......       ...-..++..++. .+.++.|+.|+.+|+.|++.+.+.++..
T Consensus       372 D~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~-v~~g~~dG~l~ald~~tG~~lW~~~~~~  436 (488)
T cd00216         372 DPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNL-VFAGAADGYFRAFDATTGKELWKFRTPS  436 (488)
T ss_pred             eCCCCcEeeEeeCCccccccccCCcccCcceEecCCe-EEEECCCCeEEEEECCCCceeeEEECCC
Confidence            99999977666643110       0111234555554 4466789999999999999999998743

The alignment model contains an 8-bladed beta-propeller.

>KOG2110|consensus

Probab=97.00  E-value=0.018  Score=47.57  Aligned_cols=96  Identities=14%  Similarity=0.156  Sum_probs=74.0

Q ss_pred             cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-C-eEEEEeCCCCcEEEEEEecCCCCCcee
Q psy16020         33 ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-N-KIHVVDPKSLVVLKSFDAHPRRESQVR  108 (151)
Q Consensus        33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n-~I~vid~~t~~i~~~~~~h~~~~~~I~  108 (151)
                      ..|.|.+|+..     ++.+...|..  ++.|+-||++.  +..|..|++ + -|+||+..+++-..+|--... ...|.
T Consensus       151 t~GdV~l~d~~-----nl~~v~~I~a--H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~-~~~Iy  222 (391)
T KOG2110|consen  151 TSGDVVLFDTI-----NLQPVNTINA--HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY-PVSIY  222 (391)
T ss_pred             CCceEEEEEcc-----cceeeeEEEe--cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce-eeEEE
Confidence            35889999865     5555556664  44999999997  355888885 4 599999999999999984443 45799


Q ss_pred             EEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020        109 QMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus       109 ~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                      .++++.++- +.+.++..+|++|-.++-.
T Consensus       223 SL~Fs~ds~~L~~sS~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  223 SLSFSPDSQFLAASSNTETVHIFKLEKVS  251 (391)
T ss_pred             EEEECCCCCeEEEecCCCeEEEEEecccc
Confidence            999997766 6777888999999887543

>KOG1963|consensus

Probab=96.99  E-value=0.013  Score=52.68  Aligned_cols=121  Identities=10%  Similarity=0.147  Sum_probs=89.6

Q ss_pred             CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC-CEEEEEe--CCeEEEEeCC
Q psy16020         16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY-NKVWCGY--KNKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~-~~Lw~g~--~n~I~vid~~   89 (151)
                      +.|.+|.+.  +.+||.|+..|-++.|+...++      ++.+ ++|   +||..+.+.+ +.+++-+  +|+|+++.+.
T Consensus       252 ~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~------kqfLPRLg---s~I~~i~vS~ds~~~sl~~~DNqI~li~~~  322 (792)
T KOG1963|consen  252 DEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK------KQFLPRLG---SPILHIVVSPDSDLYSLVLEDNQIHLIKAS  322 (792)
T ss_pred             cccceeEEecCCceEeecccceEEEEEeecCCC------cccccccC---CeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence            788888775  5589999999999999875322      2333 455   7999988874 5566554  6899999999


Q ss_pred             CCcEEEEEEecCCC--------CCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         90 SLVVLKSFDAHPRR--------ESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        90 t~~i~~~~~~h~~~--------~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++.++.++.+-...        .+-.+.+.+++ .+..+-..+.+.|++||.-+-+.+.++++..
T Consensus       323 dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~  387 (792)
T KOG1963|consen  323 DLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCD  387 (792)
T ss_pred             chhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEe
Confidence            99999998864322        22344555554 5567778899999999999988888776643

>KOG1272|consensus

Probab=96.95  E-value=0.0012  Score=55.85  Aligned_cols=119  Identities=9%  Similarity=0.141  Sum_probs=82.1

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG   78 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g   78 (151)
                      +|+.+.+.++... ..+..|..++-  -+-+|.+||+|..|+.++      ..| .+++-.+..||+++++-. ++.-+.
T Consensus       238 VS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s------keP-LvKiLcH~g~V~siAv~~~G~YMaT  310 (545)
T KOG1272|consen  238 VSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS------KEP-LVKILCHRGPVSSIAVDRGGRYMAT  310 (545)
T ss_pred             echhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCC------cch-HHHHHhcCCCcceEEECCCCcEEee
Confidence            5666777777776 46666666553  367788999999998753      232 223333459999999974 554443


Q ss_pred             e--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         79 Y--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        79 ~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      .  ++++.|||..++.-..+... +   -....+.++..| .++++..+.+.+|--.
T Consensus       311 tG~Dr~~kIWDlR~~~ql~t~~t-p---~~a~~ls~Sqkg-lLA~~~G~~v~iw~d~  362 (545)
T KOG1272|consen  311 TGLDRKVKIWDLRNFYQLHTYRT-P---HPASNLSLSQKG-LLALSYGDHVQIWKDA  362 (545)
T ss_pred             cccccceeEeeeccccccceeec-C---CCcccccccccc-ceeeecCCeeeeehhh
Confidence            3  47899999998875555443 1   267788888788 5689999999999543

>KOG1587|consensus

Probab=96.94  E-value=0.0076  Score=52.63  Aligned_cols=123  Identities=13%  Similarity=0.116  Sum_probs=86.0

Q ss_pred             CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCC----CcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEE
Q psy16020         16 DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDL----SKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHV   85 (151)
Q Consensus        16 ~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~----~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~v   85 (151)
                      -.++++.+.   +++.+||...|.|..=.|.. ..-..    +.+.....+.  .||+++..+.  -.+..++|+ .+.+
T Consensus       348 ~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g-~~~~~~~~~~~~~~~~~h~--g~v~~v~~nPF~~k~fls~gDW~vri  424 (555)
T KOG1587|consen  348 VGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG-YTPAPEVSYKGHSTFITHI--GPVYAVSRNPFYPKNFLSVGDWTVRI  424 (555)
T ss_pred             cceeeEeeccCCCceEEEEcCCcEEEEEeccC-CcccccccccccccccccC--cceEeeecCCCccceeeeeccceeEe
Confidence            366777774   56899999999988854531 11011    1111233444  9999999985  556666654 8999


Q ss_pred             EeCC-CCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCc--cceeeeEeCC
Q psy16020         86 VDPK-SLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHT--YQHLQDVDIE  144 (151)
Q Consensus        86 id~~-t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t--~~~l~~idi~  144 (151)
                      |..+ .....-.++-+.+   +|+.+++++  ..|+++.+.+|.|.+||...  .++...+.+.
T Consensus       425 Ws~~~~~~Pl~~~~~~~~---~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~  485 (555)
T KOG1587|consen  425 WSEDVIASPLLSLDSSPD---YVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVC  485 (555)
T ss_pred             ccccCCCCcchhhhhccc---eeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccccc
Confidence            9887 5667777776765   799999994  47899999999999999873  6666665433

>KOG2919|consensus

Probab=96.90  E-value=0.019  Score=46.98  Aligned_cols=112  Identities=17%  Similarity=0.298  Sum_probs=78.3

Q ss_pred             ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeeeC---CEEEEEe-CCeEEEEe
Q psy16020         17 TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAVY---NKVWCGY-KNKIHVVD   87 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid   87 (151)
                      +..||.+.  +.++|+|- +-.|.||+...-|+ +......+.-   |- ..=|.|+++..   +.+.+|+ ++++=+++
T Consensus       160 aAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr-~c~vy~t~~~~k~gq-~giisc~a~sP~~~~~~a~gsY~q~~giy~  236 (406)
T KOG2919|consen  160 AAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGR-DCPVYTTVTKGKFGQ-KGIISCFAFSPMDSKTLAVGSYGQRVGIYN  236 (406)
T ss_pred             hheeEEecCCCCeEeecc-cceEEEeeccCCCC-CCcchhhhhcccccc-cceeeeeeccCCCCcceeeecccceeeeEe
Confidence            45666665  34899998 88999999865454 3333333322   21 24456777753   3566665 77888887


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t  134 (151)
                      -..+.....+-+|..   .|+++.+.++|  .+.-.+.|..|..||.+.
T Consensus       237 ~~~~~pl~llggh~g---GvThL~~~edGn~lfsGaRk~dkIl~WDiR~  282 (406)
T KOG2919|consen  237 DDGRRPLQLLGGHGG---GVTHLQWCEDGNKLFSGARKDDKILCWDIRY  282 (406)
T ss_pred             cCCCCceeeecccCC---CeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence            788888888889975   89999999554  455556699999999984

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=96.82  E-value=0.055  Score=41.78  Aligned_cols=98  Identities=24%  Similarity=0.277  Sum_probs=70.4

Q ss_pred             cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C-EEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCcee
Q psy16020         33 ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N-KVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVR  108 (151)
Q Consensus        33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~-~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~  108 (151)
                      .+|.+.+|+...      .......+..+...|+++.+.. + .+..+.  ++.+.+|+..+......+..|..   .|.
T Consensus       132 ~d~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~  202 (466)
T COG2319         132 LDGTVKLWDLST------PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD---PVS  202 (466)
T ss_pred             CCccEEEEEecC------CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCC---ceE
Confidence            367788877642      0112223333458889888875 3 344443  56899999999999999998865   899


Q ss_pred             EEEEeCCE--EEEEEcCCCeEEEEeCCccceee
Q psy16020        109 QMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus       109 ~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      ++.+.+.+  ..++.+.|+.+++||..+.+.+.
T Consensus       203 ~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~  235 (466)
T COG2319         203 SLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLR  235 (466)
T ss_pred             EEEEcCCcceEEEEecCCCcEEEEECCCCcEEe
Confidence            99988776  45555899999999988777766

>KOG4283|consensus

Probab=96.80  E-value=0.044  Score=44.46  Aligned_cols=90  Identities=17%  Similarity=0.116  Sum_probs=60.9

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCCe---EEEEecCCcEEEEEcCC-CCCC---CCCc---ceEEEeCC-CCCceEEEee
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQGR---VVCALADGSVAIFRRGP-DGQW---DLSK---YHTVTLGL-PHHSVRSLAA   70 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~~---v~vgl~nG~l~v~~~~~-~~~w---d~~~---~~~i~l~~-~~~pV~~m~~   70 (151)
                      +.+..|-|.++=+ +-|++....+..   ++.|.+||.+..|+... .|+.   |..+   |..++-.. +...|+.++.
T Consensus       175 i~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~  254 (397)
T KOG4283|consen  175 IASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW  254 (397)
T ss_pred             ccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence            4566677777644 889999887764   88899999999998752 2321   2222   22233111 2377888888


Q ss_pred             eC--CEEE-EEeCCeEEEEeCCCCc
Q psy16020         71 VY--NKVW-CGYKNKIHVVDPKSLV   92 (151)
Q Consensus        71 v~--~~Lw-~g~~n~I~vid~~t~~   92 (151)
                      ..  .++| ||.++++.+|+.++|.
T Consensus       255 tSd~~~l~~~gtd~r~r~wn~~~G~  279 (397)
T KOG4283|consen  255 TSDARYLASCGTDDRIRVWNMESGR  279 (397)
T ss_pred             cccchhhhhccCccceEEeecccCc
Confidence            63  5566 7778999999999876

>KOG1240|consensus

Probab=96.79  E-value=0.019  Score=53.69  Aligned_cols=123  Identities=13%  Similarity=0.087  Sum_probs=88.6

Q ss_pred             ceeeeeeCC---CceeeeEEeCC--eEEEEecCCcEEEEEcC---CCCCCCCCcceEEEeCCCCCceEEEeee--C---C
Q psy16020          7 TPYPLNKIL---DTALPPVHVQG--RVVCALADGSVAIFRRG---PDGQWDLSKYHTVTLGLPHHSVRSLAAV--Y---N   73 (151)
Q Consensus         7 ~~l~~i~l~---~~V~~i~~~~~--~v~vgl~nG~l~v~~~~---~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~---~   73 (151)
                      ..+|++|.+   ..|++++-.+.  -+.+|.+.|.+..|+..   .-..|        +.+ ...|++.|...  .   .
T Consensus      1184 ~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw--------~~P-~~~~i~~v~~~~~~~~~S 1254 (1431)
T KOG1240|consen 1184 HDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSW--------EHP-ARAPIRHVWLCPTYPQES 1254 (1431)
T ss_pred             hhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecc--------cCc-ccCCcceEEeeccCCCCc
Confidence            456777766   68999988654  58899999999999864   11123        222 13777777764  1   1


Q ss_pred             -EEEEEe-C-CeEEEEeCCCCcEEEEEEec-----------------CCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         74 -KVWCGY-K-NKIHVVDPKSLVVLKSFDAH-----------------PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        74 -~Lw~g~-~-n~I~vid~~t~~i~~~~~~h-----------------~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                       .+-+|. + |-|-+||.+++...+.|-+.                 +.....+.+-...++++.++++.|..||.||..
T Consensus      1255 ~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1255 VSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred             eEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence             245555 4 46999999999999888766                 233345777777899999999999999999998


Q ss_pred             cccee
Q psy16020        134 TYQHL  138 (151)
Q Consensus       134 t~~~l  138 (151)
                      +-+..
T Consensus      1335 ~p~~s 1339 (1431)
T KOG1240|consen 1335 RPEIS 1339 (1431)
T ss_pred             Ccccc
Confidence            65544

>KOG1063|consensus

Probab=96.78  E-value=0.0053  Score=54.13  Aligned_cols=124  Identities=15%  Similarity=0.219  Sum_probs=74.8

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC-CceEEEeee--CCEEEEEe
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH-HSVRSLAAV--YNKVWCGY   79 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-~pV~~m~~v--~~~Lw~g~   79 (151)
                      ...+|+..+++. ..+.|+.-......+..++|++.+|+...+.   +--...+.+.... -| .|++..  ++..-.+|
T Consensus        89 ~~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e---~~~~~~~rf~~k~~ip-LcL~~~~~~~~~lla~  164 (764)
T KOG1063|consen   89 EYLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVWDKQQDE---VFLLAVLRFEIKEAIP-LCLAALKNNKTFLLAC  164 (764)
T ss_pred             hheEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEeecCCCc---eeeehheehhhhhHhh-HHHhhhccCCcEEEEe
Confidence            344566666662 4666665555455555689999999873221   0001122222111 22 244444  35666677


Q ss_pred             CCe---EEEEe--CCCCcEEEEEEecCCCCCceeEEEEe---C-CEEEEEEcCCCeEEEEeCCc
Q psy16020         80 KNK---IHVVD--PKSLVVLKSFDAHPRRESQVRQMTWA---G-DGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        80 ~n~---I~vid--~~t~~i~~~~~~h~~~~~~I~~m~~~---~-~~vwis~~~d~~l~lwd~~t  134 (151)
                      |+.   |.++.  +.+++...++++|+|   -|+.+++.   + +-.+.|++.|..||+|-..-
T Consensus       165 Ggs~~~v~~~s~~~d~f~~v~el~GH~D---WIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~  225 (764)
T KOG1063|consen  165 GGSKFVVDLYSSSADSFARVAELEGHTD---WIRSLAFARLGGDDLLLASSSQDRYIRIWRIVL  225 (764)
T ss_pred             cCcceEEEEeccCCcceeEEEEeeccch---hhhhhhhhccCCCcEEEEecCCceEEEEEEEEe
Confidence            654   33333  234568888999998   77777776   3 45589999999999998763

>KOG1272|consensus

Probab=96.75  E-value=0.0023  Score=54.13  Aligned_cols=127  Identities=13%  Similarity=0.146  Sum_probs=83.6

Q ss_pred             ceeeeeeCCCceeeeEEeCCe-EEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C-EEEEEeC-C
Q psy16020          7 TPYPLNKILDTALPPVHVQGR-VVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N-KVWCGYK-N   81 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~~-v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~-~Lw~g~~-n   81 (151)
                      ..||.++=...|..|.|.+.. ++|+.++ |-|.--+. +-|.    ....+..+.  .+++.|..+. | -+-.|-. +
T Consensus       201 tElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DV-S~Gk----lVa~~~t~~--G~~~vm~qNP~NaVih~GhsnG  273 (545)
T KOG1272|consen  201 TELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDV-STGK----LVASIRTGA--GRTDVMKQNPYNAVIHLGHSNG  273 (545)
T ss_pred             cEEeehhhcCchhhhcccchhheeeecccCCceEEEee-chhh----hhHHHHccC--CccchhhcCCccceEEEcCCCc
Confidence            345666666666666666553 4444333 33332222 1121    111223333  6777777764 3 3445554 5


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      .|..|.+.+-+.+-.+..|.   ++|..+++..+|- -++.+-|..+++||.+.+..+..+-.
T Consensus       274 tVSlWSP~skePLvKiLcH~---g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t  333 (545)
T KOG1272|consen  274 TVSLWSPNSKEPLVKILCHR---GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT  333 (545)
T ss_pred             eEEecCCCCcchHHHHHhcC---CCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence            89999999999888888896   4899999998877 57778899999999999988888864

>KOG3881|consensus

Probab=96.71  E-value=0.03  Score=46.54  Aligned_cols=124  Identities=12%  Similarity=0.201  Sum_probs=83.2

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-C--CeEEEEeCC
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-K--NKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~--n~I~vid~~   89 (151)
                      .+|-.+.+.++.|..+.++|.|.++....+   |+..-..+.+.. ..++--|-..+   +-+..|- .  |.+.+||++
T Consensus       106 ~~I~gl~~~dg~Litc~~sG~l~~~~~k~~---d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle  181 (412)
T KOG3881|consen  106 KSIKGLKLADGTLITCVSSGNLQVRHDKSG---DLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLE  181 (412)
T ss_pred             ccccchhhcCCEEEEEecCCcEEEEeccCC---ccccccceeeec-CCceeeeccCCCCCceEecCchhcccceeeeecc
Confidence            589999999999999999999999987532   322222333322 03444444443   2233343 3  568999988


Q ss_pred             CCcEEEEEEecCCCCC--------ceeEEEEe-C--CEEEEEEcCCCeEEEEeCCc-cceeeeEeCCc
Q psy16020         90 SLVVLKSFDAHPRRES--------QVRQMTWA-G--DGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEP  145 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~--------~I~~m~~~-~--~~vwis~~~d~~l~lwd~~t-~~~l~~idi~~  145 (151)
                      ..  ++.|++-.-+..        -++.+.+. |  ...++++.+-+.+|+||++. .+++..||+..
T Consensus       182 ~~--~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E  247 (412)
T KOG3881|consen  182 QS--KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE  247 (412)
T ss_pred             cc--eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEecccc
Confidence            76  788887643211        13344444 3  57799999999999999997 67888888764

>KOG4328|consensus

Probab=96.71  E-value=0.012  Score=49.66  Aligned_cols=127  Identities=13%  Similarity=0.139  Sum_probs=77.1

Q ss_pred             CceeeeeeCC-CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC-CCceEEEeeeC---CEEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSLAAVY---NKVW   76 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-~~pV~~m~~v~---~~Lw   76 (151)
                      ......++.. ..|+++.+++    +-|.+|---|+|-+|+....+ -|.   ..+-++.+ ..||.||.+..   ++++
T Consensus       176 ~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~-~d~---d~v~~f~~hs~~Vs~l~F~P~n~s~i~  251 (498)
T KOG4328|consen  176 YRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE-KDK---DGVYLFTPHSGPVSGLKFSPANTSQIY  251 (498)
T ss_pred             ceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCC-Ccc---CceEEeccCCccccceEecCCChhhee
Confidence            4445566655 6899998875    347777777999998874111 111   12333332 27777777742   5555


Q ss_pred             EEe-CCeEEEEeCCCCcEE---------------------------------------------EEEEecCCCCCceeEE
Q psy16020         77 CGY-KNKIHVVDPKSLVVL---------------------------------------------KSFDAHPRRESQVRQM  110 (151)
Q Consensus        77 ~g~-~n~I~vid~~t~~i~---------------------------------------------~~~~~h~~~~~~I~~m  110 (151)
                      .++ ++.|..-|.+++..+                                             -.+..|.   ..|+.|
T Consensus       252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~---kKI~sv  328 (498)
T KOG4328|consen  252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHK---KKITSV  328 (498)
T ss_pred             eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhh---ccccee
Confidence            444 566666665543311                                             0111232   368888


Q ss_pred             EEeCC--EEEEEEcCCCeEEEEeCCccceee
Q psy16020        111 TWAGD--GVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus       111 ~~~~~--~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      .+-+.  .++++++.|.+.++||++....-.
T Consensus       329 ~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~  359 (498)
T KOG4328|consen  329 ALNPVCPWFLATASLDQTAKIWDLRQLRGKA  359 (498)
T ss_pred             ecCCCCchheeecccCcceeeeehhhhcCCC
Confidence            77643  557999999999999999754433

>KOG1645|consensus

Probab=96.66  E-value=0.071  Score=44.70  Aligned_cols=141  Identities=12%  Similarity=0.107  Sum_probs=77.0

Q ss_pred             CCceeeeeeCCCceeeeEEe---CCeEEEEecCCcEEEEEcCC-CC----------------------------------
Q psy16020          5 HPTPYPLNKILDTALPPVHV---QGRVVCALADGSVAIFRRGP-DG----------------------------------   46 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~-~~----------------------------------   46 (151)
                      +.-+..+..++.++-+..+.   .+.+|+|+.||-|.||+... .+                                  
T Consensus       225 t~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~  304 (463)
T KOG1645|consen  225 TSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVF  304 (463)
T ss_pred             cceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEe
Confidence            33444455555555555553   45799999999999998752 00                                  


Q ss_pred             ------CCCCC-----cceEEEeCCCCCceEEEeeeC--CEEEEEeCC-----e---EEE-EeCCCCc-EEEEEEecCCC
Q psy16020         47 ------QWDLS-----KYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-----K---IHV-VDPKSLV-VLKSFDAHPRR  103 (151)
Q Consensus        47 ------~wd~~-----~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-----~---I~v-id~~t~~-i~~~~~~h~~~  103 (151)
                            .|+..     .|...+++. ..++.+|...+  +++-+.+..     +   |.+ +|-.+|. +...-.++..+
T Consensus       305 ~lt~l~f~ei~~s~~~~p~vlele~-pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs  383 (463)
T KOG1645|consen  305 ALTVLQFYEIVFSAECLPCVLELEP-PGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGS  383 (463)
T ss_pred             eehhhhhhhhhccccCCCcccccCC-CcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCC
Confidence                  12111     112234443 26667777754  777777642     1   111 1111222 22222223110


Q ss_pred             -------CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020        104 -------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus       104 -------~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                             ...|.... ..+.+...++....+.+||+.+++.+|++.+..+|
T Consensus       384 ~~~kl~t~~ai~~~~-~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~epv  433 (463)
T KOG1645|consen  384 KQTKLSTTQAIRAVE-DNNYIVVVGDSTNELILQDPHSFEVVQTLALSEPV  433 (463)
T ss_pred             cccccccccceeccc-cccEEEEecCCcceeEEeccchhheeeecccCcce
Confidence                   01222211 12445666668889999999999999998776554

>KOG1007|consensus

Probab=96.64  E-value=0.017  Score=46.59  Aligned_cols=104  Identities=15%  Similarity=0.181  Sum_probs=72.9

Q ss_pred             eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCCE--EEEEeC--CeEEEEeCC-CCcEEEEE
Q psy16020         24 VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNK--VWCGYK--NKIHVVDPK-SLVVLKSF   97 (151)
Q Consensus        24 ~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~~--Lw~g~~--n~I~vid~~-t~~i~~~~   97 (151)
                      +++.-++.+.++++-.|+.....       +...+.+ +.+-||.|.++.++  +-+.||  +.|++||++ +....+++
T Consensus       182 Hdgnqv~tt~d~tl~~~D~RT~~-------~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el  254 (370)
T KOG1007|consen  182 HDGNQVATTSDSTLQFWDLRTMK-------KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQEL  254 (370)
T ss_pred             CccceEEEeCCCcEEEEEccchh-------hhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccccc
Confidence            44567777778888888764211       2234443 23779999998643  556665  689999988 45588889


Q ss_pred             EecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccce
Q psy16020         98 DAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      ++|+-   =|=++.+-  -+.+.+|++.|+.+.||-+.+-..
T Consensus       255 ~~HsH---WvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSS  293 (370)
T KOG1007|consen  255 PGHSH---WVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSS  293 (370)
T ss_pred             CCCce---EEEEEEecCccceEEEecCCCceeEEEecccccc
Confidence            98863   46666655  346688999999999999886443

>KOG0771|consensus

Probab=96.61  E-value=0.023  Score=47.32  Aligned_cols=118  Identities=15%  Similarity=0.180  Sum_probs=74.2

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCeEEEEeCCCCcEE
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNKIHVVDPKSLVVL   94 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~I~vid~~t~~i~   94 (151)
                      .+.+.-+.+..+=+|..||++.||++.+..       ..+....+...|++|.+.. +++-+.- ++.-.|||.+++...
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~-------t~l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~  220 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML-------TILEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVNTGAAL  220 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcch-------hhhhhHhhcCccccceeCCCCcEEEEecCCceEEEEeccCchh
Confidence            455555566678899999999999975211       1112222347777777764 3332222 347777777776211


Q ss_pred             EEEE--------------------------e---------------c----------CCCCCceeEEEEeCCEEEEE-Ec
Q psy16020         95 KSFD--------------------------A---------------H----------PRRESQVRQMTWAGDGVWVS-IR  122 (151)
Q Consensus        95 ~~~~--------------------------~---------------h----------~~~~~~I~~m~~~~~~vwis-~~  122 (151)
                      .+.+                          .               |          ......|.+|.++.+|-+++ +.
T Consensus       221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT  300 (398)
T KOG0771|consen  221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGT  300 (398)
T ss_pred             hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence            1111                          0               0          00134899999998888554 55


Q ss_pred             CCCeEEEEeCCccceeeeE
Q psy16020        123 LDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       123 ~d~~l~lwd~~t~~~l~~i  141 (151)
                      .|+.|-++++.+.+.++-+
T Consensus       301 ~dGsVai~~~~~lq~~~~v  319 (398)
T KOG0771|consen  301 MDGSVAIYDAKSLQRLQYV  319 (398)
T ss_pred             cCCcEEEEEeceeeeeEee
Confidence            6999999999999888765

>KOG0307|consensus

Probab=96.61  E-value=0.0019  Score=59.19  Aligned_cols=112  Identities=12%  Similarity=0.099  Sum_probs=73.9

Q ss_pred             EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EEEEEeC-CeEEEEeCCCCcEEEEEEecCCC
Q psy16020         28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR  103 (151)
Q Consensus        28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~  103 (151)
                      +--|+.||.|..|+..+.- -+-+....-+...+..+|+.+.++.  + -|.-|.+ +.|+|||....+.--+.. ....
T Consensus        83 IaGG~edG~I~ly~p~~~~-~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-~~~~  160 (1049)
T KOG0307|consen   83 IAGGLEDGNIVLYDPASII-ANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-SQAP  160 (1049)
T ss_pred             eeccccCCceEEecchhhc-cCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-CCCC
Confidence            6678999999999876420 0112222234455669999999974  2 2333332 489999998755433332 2223


Q ss_pred             CCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020        104 ESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       104 ~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      -+.|.++.+-.  ..|+.|++.++..-+||.+..+++-++
T Consensus       161 ~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~l  200 (1049)
T KOG0307|consen  161 PSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKL  200 (1049)
T ss_pred             cccceEeccchhhhHHhhccCCCCCceeccccCCCccccc
Confidence            45788888863  356999999999999999977655444

>KOG4378|consensus

Probab=96.60  E-value=0.051  Score=46.77  Aligned_cols=127  Identities=12%  Similarity=0.085  Sum_probs=84.6

Q ss_pred             CCceeeeeeCC--CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--eCCEEE-
Q psy16020          5 HPTPYPLNKIL--DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--VYNKVW-   76 (151)
Q Consensus         5 ~~~~l~~i~l~--~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v~~~Lw-   76 (151)
                      +.+.-..++.+  ++|-=+.|+..   .+-.+.-+|.|.+|+..  |.    .|..--...+..|.+.+.+  ++..|. 
T Consensus       152 t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~--g~----sp~~~~~~~HsAP~~gicfspsne~l~v  225 (673)
T KOG4378|consen  152 TKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ--GM----SPIFHASEAHSAPCRGICFSPSNEALLV  225 (673)
T ss_pred             cCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEecc--CC----CcccchhhhccCCcCcceecCCccceEE
Confidence            44444556666  34545566543   36677779999999875  21    1211111112367665544  555565 


Q ss_pred             -EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020         77 -CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT-YQHLQDV  141 (151)
Q Consensus        77 -~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t-~~~l~~i  141 (151)
                       +|++.+|++||..+.+...++...+    +...+++.+.|- ++++...+.|..||.+. .+++..+
T Consensus       226 sVG~Dkki~~yD~~s~~s~~~l~y~~----Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~  289 (673)
T KOG4378|consen  226 SVGYDKKINIYDIRSQASTDRLTYSH----PLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVR  289 (673)
T ss_pred             EecccceEEEeecccccccceeeecC----CcceeeecCCceEEEeecCCceEEEEecccCCCCceEe
Confidence             4556899999999998888888653    788888888877 67777789999999995 5566555

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=96.58  E-value=0.0074  Score=33.79  Aligned_cols=37  Identities=16%  Similarity=0.126  Sum_probs=26.7

Q ss_pred             ceeeeeeCCCce-eeeEEeCCeEEEEecCCcEEEEEcC
Q psy16020          7 TPYPLNKILDTA-LPPVHVQGRVVCALADGSVAIFRRG   43 (151)
Q Consensus         7 ~~l~~i~l~~~V-~~i~~~~~~v~vgl~nG~l~v~~~~   43 (151)
                      +.+|+.+++.++ ..+...+++||++..||.|.+++..
T Consensus         2 ~~~W~~~~~~~~~~~~~v~~g~vyv~~~dg~l~ald~~   39 (40)
T PF13570_consen    2 KVLWSYDTGGPIWSSPAVAGGRVYVGTGDGNLYALDAA   39 (40)
T ss_dssp             -EEEEEE-SS---S--EECTSEEEEE-TTSEEEEEETT
T ss_pred             ceeEEEECCCCcCcCCEEECCEEEEEcCCCEEEEEeCC
Confidence            678999999766 5578889999999999999999863

>KOG4190|consensus

Probab=96.57  E-value=0.0097  Score=51.83  Aligned_cols=121  Identities=12%  Similarity=0.233  Sum_probs=84.5

Q ss_pred             eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-EEEEEeCCeEEEEeCCCCcEEEEEEecCC
Q psy16020         24 VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-KVWCGYKNKIHVVDPKSLVVLKSFDAHPR  102 (151)
Q Consensus        24 ~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-~Lw~g~~n~I~vid~~t~~i~~~~~~h~~  102 (151)
                      .+|....+..|-++..|+..+.|.=--.....++...++.||..+-+..+ +--++|++-|++||+--+....+.+-.+.
T Consensus       746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk  825 (1034)
T KOG4190|consen  746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPK  825 (1034)
T ss_pred             cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCcc
Confidence            34556677778999999988655200012234455556799999999864 46678899999999998887776654332


Q ss_pred             --CCCceeEEEEeCCEEEEEE-cCCCeEEEEeCCccceeeeEeCC
Q psy16020        103 --RESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       103 --~~~~I~~m~~~~~~vwis~-~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                        ....|.|+......+.+++ +-.++++++|+++++-..+..+.
T Consensus       826 ~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVc  870 (1034)
T KOG4190|consen  826 EGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVC  870 (1034)
T ss_pred             cCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEec
Confidence              1234666665555666665 88999999999998877776554

>KOG4547|consensus

Probab=96.52  E-value=0.056  Score=46.76  Aligned_cols=110  Identities=19%  Similarity=0.200  Sum_probs=72.3

Q ss_pred             eCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeeeCC-EEEEEeCCeEEEEeC
Q psy16020         13 KILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYN-KVWCGYKNKIHVVDP   88 (151)
Q Consensus        13 ~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v~~-~Lw~g~~n~I~vid~   88 (151)
                      +.+..|.++.-..  +.+|.+.+|+.+..+...        ....+..-. .+..+-++.+..+ .+-.....+|.+||+
T Consensus       100 ~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~--------~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~~ik~~~~  171 (541)
T KOG4547|consen  100 KHYGNVNEILDAQRLGCIYSVGADLKVVYILEK--------EKVIIRIWKEQKPLVSSLCISPDGKILLTASRQIKVLDI  171 (541)
T ss_pred             CCCCcceeeecccccCceEecCCceeEEEEecc--------cceeeeeeccCCCccceEEEcCCCCEEEeccceEEEEEc
Confidence            4556788887544  369999999999888754        222333221 1255556666543 333333468999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEe-------CCEEEEEEcCCCeEEEEeCC
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWA-------GDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~-------~~~vwis~~~d~~l~lwd~~  133 (151)
                      +|+++..+|++|..   +|+++.+.       |..|+-+..-...+-.|-.+
T Consensus       172 ~~kevv~~ftgh~s---~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~  220 (541)
T KOG4547|consen  172 ETKEVVITFTGHGS---PVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE  220 (541)
T ss_pred             cCceEEEEecCCCc---ceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence            99999999999974   78887776       34556555556666666555

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.52  E-value=0.059  Score=37.46  Aligned_cols=69  Identities=23%  Similarity=0.357  Sum_probs=49.9

Q ss_pred             CCceeeeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC------CEEEE
Q psy16020          5 HPTPYPLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY------NKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~------~~Lw~   77 (151)
                      ..+.+.+++-++.|.+|.+.. ++..-||+||+|-+|++. ...|        .+.. ++.+.||...+      .+|-+
T Consensus        32 ~~e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~-~RlW--------RiKS-K~~~~~~~~~D~~gdG~~eLI~  101 (111)
T PF14783_consen   32 GDEIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDRS-QRLW--------RIKS-KNQVTSMAFYDINGDGVPELIV  101 (111)
T ss_pred             CCcEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeCc-ceee--------eecc-CCCeEEEEEEcCCCCCceEEEE
Confidence            346789999999999999865 467789999999999873 2345        3322 35577888864      26777


Q ss_pred             EeCC-eE
Q psy16020         78 GYKN-KI   83 (151)
Q Consensus        78 g~~n-~I   83 (151)
                      |..| +|
T Consensus       102 GwsnGkv  108 (111)
T PF14783_consen  102 GWSNGKV  108 (111)
T ss_pred             EecCCeE
Confidence            7753 55

>KOG0280|consensus

Probab=96.49  E-value=0.066  Score=43.27  Aligned_cols=110  Identities=12%  Similarity=0.196  Sum_probs=69.9

Q ss_pred             EEeCCeEEEEecCCcEE-EEEcC----CCCCCCCCcceEEEeC-CCCCceEEEeeeCCEEEEEeC-CeEEEEeCC-CCc-
Q psy16020         22 VHVQGRVVCALADGSVA-IFRRG----PDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYK-NKIHVVDPK-SLV-   92 (151)
Q Consensus        22 ~~~~~~v~vgl~nG~l~-v~~~~----~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~-t~~-   92 (151)
                      ...+.++|+++++|.+. |+...    +...|........... +.++|        +-+|.|.+ +++..||.+ ..+ 
T Consensus       130 ~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~p--------nlvytGgDD~~l~~~D~R~p~~~  201 (339)
T KOG0280|consen  130 STSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEP--------NLVYTGGDDGSLSCWDIRIPKTF  201 (339)
T ss_pred             eccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCC--------ceEEecCCCceEEEEEecCCcce
Confidence            33466899999999998 44332    1123433322222111 11233        56788885 589999988 232 


Q ss_pred             EEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc-cceeeeEe
Q psy16020         93 VLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT-YQHLQDVD  142 (151)
Q Consensus        93 i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t-~~~l~~id  142 (151)
                      +.+.-..|+.   .|.++..++.  ...++++.|-.|++||++. ++++.+=.
T Consensus       202 i~~n~kvH~~---GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~  251 (339)
T KOG0280|consen  202 IWHNSKVHTS---GVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK  251 (339)
T ss_pred             eeecceeeec---ceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc
Confidence            3333456653   7888888754  2367999999999999995 77776543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=96.49  E-value=0.27  Score=37.89  Aligned_cols=121  Identities=16%  Similarity=0.220  Sum_probs=82.2

Q ss_pred             CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEee-e--CCEEEEE--e-CCeEE
Q psy16020         14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAA-V--YNKVWCG--Y-KNKIH   84 (151)
Q Consensus        14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~-v--~~~Lw~g--~-~n~I~   84 (151)
                      ..+.+.++.+...  .+..+..+|.+.+|+.....      .....+.. ...++..+.. .  .+....+  . .+.+.
T Consensus        64 ~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  137 (466)
T COG2319          64 HEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE------KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVK  137 (466)
T ss_pred             ccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc------eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEE
Confidence            4467777777533  35555569999999875321      12222222 1136666665 3  2323433  3 35899


Q ss_pred             EEeCCC-CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcC-CCeEEEEeCCccceeeeEeC
Q psy16020         85 VVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRL-DSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        85 vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~-d~~l~lwd~~t~~~l~~idi  143 (151)
                      +||..+ ......+..|..   .|..+.+.+++ .+++.+. |+.+++|+..+.+.++.+..
T Consensus       138 ~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (466)
T COG2319         138 LWDLSTPGKLIRTLEGHSE---SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG  196 (466)
T ss_pred             EEEecCCCeEEEEEecCcc---cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc
Confidence            999998 899999999975   88899999887 4666665 99999999998777776653

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.49  E-value=0.17  Score=44.04  Aligned_cols=136  Identities=14%  Similarity=0.151  Sum_probs=83.7

Q ss_pred             CCCCceeeeeeCCCc-----ee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcce---------------
Q psy16020          3 YPHPTPYPLNKILDT-----AL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYH---------------   54 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~-----V~-~i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~---------------   54 (151)
                      ..+.+.+|+.++.+.     +. .-...++.||++.+      +|.|..|+...+. .|......               
T Consensus       137 a~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~  216 (527)
T TIGR03075       137 AKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGG  216 (527)
T ss_pred             CCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCccccccccccccc
Confidence            456788888876531     21 22345789999975      6899999885432 35433210               


Q ss_pred             ----------EEEeCCCCCceE-EEee--eCCEEEEEeCC-----------------eEEEEeCCCCcEEEEEEecC-C-
Q psy16020         55 ----------TVTLGLPHHSVR-SLAA--VYNKVWCGYKN-----------------KIHVVDPKSLVVLKSFDAHP-R-  102 (151)
Q Consensus        55 ----------~i~l~~~~~pV~-~m~~--v~~~Lw~g~~n-----------------~I~vid~~t~~i~~~~~~h~-~-  102 (151)
                                ..+.+.  .++= .|.+  ..+.||.+.||                 .|..+|++|++++=.|+..+ | 
T Consensus       217 ~~~~~tw~~~~~~~gg--~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~  294 (527)
T TIGR03075       217 EPGAKTWPGDAWKTGG--GATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDE  294 (527)
T ss_pred             ccccCCCCCCccccCC--CCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCC
Confidence                      001111  1121 1122  23567777744                 89999999999987777532 1 


Q ss_pred             ----CCCc--eeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeee
Q psy16020        103 ----RESQ--VRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus       103 ----~~~~--I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                          ...+  +..+...|.  .+.+...+++.+.+.|.+|++++..
T Consensus       295 wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~  340 (527)
T TIGR03075       295 WDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSA  340 (527)
T ss_pred             ccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceecc
Confidence                1122  233333444  4688999999999999999999743

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1310|consensus

Probab=96.47  E-value=0.018  Score=50.02  Aligned_cols=110  Identities=17%  Similarity=0.251  Sum_probs=73.3

Q ss_pred             CceeeeEEeC-CeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEe-CC-eEEEEeC
Q psy16020         16 DTALPPVHVQ-GRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGY-KN-KIHVVDP   88 (151)
Q Consensus        16 ~~V~~i~~~~-~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~-~n-~I~vid~   88 (151)
                      .=|.||.... +.++++++|- .+.||+..     ..+..+.|.-|. ...|.|..++   ++++-+.+ |+ .|+++|+
T Consensus        51 GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~-----~~KllhsI~TgH-taNIFsvKFvP~tnnriv~sgAgDk~i~lfdl  124 (758)
T KOG1310|consen   51 GCVNCLEWNADGELLASGSDDTRLIVWDPF-----EYKLLHSISTGH-TANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL  124 (758)
T ss_pred             ceecceeecCCCCEEeecCCcceEEeecch-----hcceeeeeeccc-ccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence            3577777753 4555555554 46666543     112334455553 5889999997   46655554 55 6999999


Q ss_pred             CCCc----------EEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc
Q psy16020         89 KSLV----------VLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        89 ~t~~----------i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t  134 (151)
                      .+.+          ..+.+..|++   .|..++..+++  ++.|+++|++||=||.+.
T Consensus       125 ~~~~~~~~d~~~~~~~~~~~cht~---rVKria~~p~~PhtfwsasEDGtirQyDiRE  179 (758)
T KOG1310|consen  125 DSSKEGGMDHGMEETTRCWSCHTD---RVKRIATAPNGPHTFWSASEDGTIRQYDIRE  179 (758)
T ss_pred             ccccccccccCccchhhhhhhhhh---hhhheecCCCCCceEEEecCCcceeeecccC
Confidence            8622          3345778887   78888887543  444999999999999985

>KOG0267|consensus

Probab=96.44  E-value=0.0054  Score=54.34  Aligned_cols=93  Identities=18%  Similarity=0.287  Sum_probs=69.8

Q ss_pred             CCCCCcceEE-EeCCCCCceEEEeeeCCEEEEEe---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE-E
Q psy16020         47 QWDLSKYHTV-TLGLPHHSVRSLAAVYNKVWCGY---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS-I  121 (151)
Q Consensus        47 ~wd~~~~~~i-~l~~~~~pV~~m~~v~~~Lw~g~---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis-~  121 (151)
                      .||++.-+.+ .|-.+..++.++.+..-.=|.++   +..+.+||.+-.-+.+.+.+|+.   .|..+.++++|-|+. +
T Consensus        96 ~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~---vv~~l~lsP~Gr~v~~g  172 (825)
T KOG0267|consen   96 VWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR---VVDVLRLSPDGRWVASG  172 (825)
T ss_pred             eeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcc---eeEEEeecCCCceeecc
Confidence            5888876644 33333477778777653323333   35799999998889999999975   899999999997655 4


Q ss_pred             cCCCeEEEEeCCccceeeeEe
Q psy16020        122 RLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       122 ~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .+|.++++||...++.+.+++
T Consensus       173 ~ed~tvki~d~~agk~~~ef~  193 (825)
T KOG0267|consen  173 GEDNTVKIWDLTAGKLSKEFK  193 (825)
T ss_pred             CCcceeeeecccccccccccc
Confidence            556999999999888887775

>KOG2139|consensus

Probab=96.42  E-value=0.025  Score=46.88  Aligned_cols=108  Identities=19%  Similarity=0.306  Sum_probs=71.9

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeCCeEEEEeCC-CCcEEEE---EEe
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKNKIHVVDPK-SLVVLKS---FDA   99 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~n~I~vid~~-t~~i~~~---~~~   99 (151)
                      ..-+|+-|-.|.+|+.+.      +.|..++- ..+.-|+||+.-   ...|.+||..-|-+|... ++..-+.   ...
T Consensus       112 ~fava~nddvVriy~kss------t~pt~Lks-~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~  184 (445)
T KOG2139|consen  112 AFAVATNDDVVRIYDKSS------TCPTKLKS-VSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMST  184 (445)
T ss_pred             hhhhhccCcEEEEeccCC------CCCceecc-hhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccc
Confidence            344566688999998753      23344443 236899999995   478999999988888655 3332221   111


Q ss_pred             cC------CCCCceeEEEEeCCEE-EEEEcC-CCeEEEEeCCccceeeeE
Q psy16020        100 HP------RRESQVRQMTWAGDGV-WVSIRL-DSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       100 h~------~~~~~I~~m~~~~~~v-wis~~~-d~~l~lwd~~t~~~l~~i  141 (151)
                      |.      ...-+|+.|.+.++|- |++.+- |+.|++||..|++...-+
T Consensus       185 ~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~  234 (445)
T KOG2139|consen  185 HHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI  234 (445)
T ss_pred             cchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc
Confidence            10      1124899999997766 777664 788999999987654433

>KOG2321|consensus

Probab=96.42  E-value=0.01  Score=51.58  Aligned_cols=83  Identities=10%  Similarity=0.181  Sum_probs=66.0

Q ss_pred             CceEEEeeeC--CEEE-EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         63 HSVRSLAAVY--NKVW-CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        63 ~pV~~m~~v~--~~Lw-~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      .+-|.|.+..  -.|| +|+|+.||=+|++-|..++.|+....   .++++... -+|+..++..++.+..||.++.+.+
T Consensus       134 ~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~---~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv  210 (703)
T KOG2321|consen  134 KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSG---ELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV  210 (703)
T ss_pred             cCCccccccCCCccEEEeecCcceEEEEccccccccccccccc---cceeeeecCccceEEecccCceEEEecchhhhhh
Confidence            5667787764  2355 56688999999999999999997653   67776666 4566666667999999999999999


Q ss_pred             eeEeCCcccc
Q psy16020        139 QDVDIEPYVS  148 (151)
Q Consensus       139 ~~idi~~~v~  148 (151)
                      ..+|+...|+
T Consensus       211 ~~l~~~~~v~  220 (703)
T KOG2321|consen  211 GTLDAASSVN  220 (703)
T ss_pred             eeeecccccC
Confidence            9999988754

>KOG1587|consensus

Probab=96.37  E-value=0.058  Score=47.22  Aligned_cols=134  Identities=18%  Similarity=0.092  Sum_probs=86.5

Q ss_pred             CceeeeeeCCCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC----------CCCceEEEeee
Q psy16020          6 PTPYPLNKILDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL----------PHHSVRSLAAV   71 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~----------~~~pV~~m~~v   71 (151)
                      +-+..+...++++..++...+    .+|.+.+||.|+-|+..     .+..|....+..          ....+++|.+.
T Consensus       282 ~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~-----~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~  356 (555)
T KOG1587|consen  282 GLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTD-----MLSLPVEGLLLESKKHKGQQSSKAVGATSLKFE  356 (555)
T ss_pred             ccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeecc-----ccccchhhcccccccccccccccccceeeEeec
Confidence            345556677789999988543    49999999999999765     222322111111          12567888885


Q ss_pred             ---CCEEEEEeC-CeEEEEeCCCCcEEE--EEEec---CCCCCceeEEEEeCCEE--EEEEcCCCeEEEEeCC-ccceee
Q psy16020         72 ---YNKVWCGYK-NKIHVVDPKSLVVLK--SFDAH---PRRESQVRQMTWAGDGV--WVSIRLDSTLRMYNAH-TYQHLQ  139 (151)
Q Consensus        72 ---~~~Lw~g~~-n~I~vid~~t~~i~~--~~~~h---~~~~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~-t~~~l~  139 (151)
                         .++..+|.+ |.|+.-+...++..-  .+++|   .-....|.++...+-+.  ++|++ |-++++|+.. ...++.
T Consensus       357 ~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~  435 (555)
T KOG1587|consen  357 PTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLL  435 (555)
T ss_pred             cCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcch
Confidence               367888885 788887666544322  22222   22245889888886654  66666 9999999998 566665


Q ss_pred             eEeCCc
Q psy16020        140 DVDIEP  145 (151)
Q Consensus       140 ~idi~~  145 (151)
                      ..+-++
T Consensus       436 ~~~~~~  441 (555)
T KOG1587|consen  436 SLDSSP  441 (555)
T ss_pred             hhhhcc
Confidence            555433

>KOG0771|consensus

Probab=96.24  E-value=0.0092  Score=49.64  Aligned_cols=72  Identities=22%  Similarity=0.266  Sum_probs=57.8

Q ss_pred             EEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         66 RSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        66 ~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+|++..  ..|-+|. ++.++||+-.+++.+..+.+|..   .|.+|.++++| .++|.+.| ..++|++.++-+++..
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~---eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~  223 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHA---EVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARK  223 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcC---ccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhc
Confidence            6777763  5677775 67999999666776666666753   89999999999 58899999 9999999999777765

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=96.20  E-value=0.025  Score=30.71  Aligned_cols=36  Identities=6%  Similarity=-0.002  Sum_probs=30.5

Q ss_pred             CceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFR   41 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~   41 (151)
                      ++++++++-+ ++|.+|.+.++  .+.+|..||+|.+|+
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            3678888866 89999999765  799999999999995

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>smart00320 WD40 WD40 repeats

Probab=96.18  E-value=0.025  Score=28.52  Aligned_cols=38  Identities=21%  Similarity=0.371  Sum_probs=30.1

Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEe
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYN  131 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd  131 (151)
                      ++....+.+|.+   .|.++.+.+. ..+++++.|+.+++||
T Consensus         2 ~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTG---PVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCC---ceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            456677777764   8999988754 5588999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG0641|consensus

Probab=96.17  E-value=0.2  Score=39.36  Aligned_cols=84  Identities=14%  Similarity=0.262  Sum_probs=60.4

Q ss_pred             CCCCCcceEEE-eCC-------CCCceEEEeee-CCEEEEEe-C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC
Q psy16020         47 QWDLSKYHTVT-LGL-------PHHSVRSLAAV-YNKVWCGY-K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD  115 (151)
Q Consensus        47 ~wd~~~~~~i~-l~~-------~~~pV~~m~~v-~~~Lw~g~-~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~  115 (151)
                      .||+..+..+. +++       -.+.|.++++- .++|-+.. . ..-..+|.+.+...++|..|+.   -|.|+.+++.
T Consensus       208 fwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsa---dir~vrfsp~  284 (350)
T KOG0641|consen  208 FWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSA---DIRCVRFSPG  284 (350)
T ss_pred             EEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCcc---ceeEEEeCCC
Confidence            36776665443 222       11456655553 35655443 3 4677889999999999999975   8999999976


Q ss_pred             EE-EEEEcCCCeEEEEeCC
Q psy16020        116 GV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus       116 ~v-wis~~~d~~l~lwd~~  133 (151)
                      .- .++++.|..|++-|.+
T Consensus       285 a~yllt~syd~~ikltdlq  303 (350)
T KOG0641|consen  285 AHYLLTCSYDMKIKLTDLQ  303 (350)
T ss_pred             ceEEEEecccceEEEeecc
Confidence            55 7899999999999987

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.15  E-value=0.11  Score=47.38  Aligned_cols=127  Identities=11%  Similarity=0.095  Sum_probs=88.8

Q ss_pred             CCCCCceeeeeeCCC--ceeeeEEe-------CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC
Q psy16020          2 EYPHPTPYPLNKILD--TALPPVHV-------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY   72 (151)
Q Consensus         2 ~~~~~~~l~~i~l~~--~V~~i~~~-------~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~   72 (151)
                      .+...+.+.+-++.+  +|.++...       +.+.|+|+++..|.-++..-.|.--...  ...-...+..-.|++..+
T Consensus       510 DLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~--~~k~Y~~~~~Fs~~aTt~  587 (794)
T PF08553_consen  510 DLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS--QSKQYSSKNNFSCFATTE  587 (794)
T ss_pred             ecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec--cccccccCCCceEEEecC
Confidence            345566666667663  46777553       4579999999999888765433100000  011122347788998875


Q ss_pred             -CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         73 -NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        73 -~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                       +.|.+|+. |.|+.||.....-+..|.+-   ..+|.+|.++.+|-|+-+--+..|-|+|+.
T Consensus       588 ~G~iavgs~~G~IRLyd~~g~~AKT~lp~l---G~pI~~iDvt~DGkwilaTc~tyLlLi~t~  647 (794)
T PF08553_consen  588 DGYIAVGSNKGDIRLYDRLGKRAKTALPGL---GDPIIGIDVTADGKWILATCKTYLLLIDTL  647 (794)
T ss_pred             CceEEEEeCCCcEEeecccchhhhhcCCCC---CCCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence             89999995 79999996544444445543   349999999999999999999999999985

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=96.15  E-value=0.28  Score=41.19  Aligned_cols=116  Identities=16%  Similarity=0.246  Sum_probs=68.9

Q ss_pred             eeeeEEeC--CeEEEEecCCcEEEEEcCCCCCC---------CCC---------cceEEEeCC-----------------
Q psy16020         18 ALPPVHVQ--GRVVCALADGSVAIFRRGPDGQW---------DLS---------KYHTVTLGL-----------------   60 (151)
Q Consensus        18 V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~w---------d~~---------~~~~i~l~~-----------------   60 (151)
                      |..+.+..  ..+.||+.+|.+++|++.....-         |..         ....+.+.+                 
T Consensus         4 v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~   83 (395)
T PF08596_consen    4 VTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLD   83 (395)
T ss_dssp             EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE-
T ss_pred             EEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhee
Confidence            45555543  57999999999999988632111         000         011111111                 


Q ss_pred             -CCCceEEEeeeC-CEEEEEeC-CeEEEEeCCCCcEEEEEEecC-----CCCCceeEEEEe-----CCE---E-EEEEcC
Q psy16020         61 -PHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLVVLKSFDAHP-----RRESQVRQMTWA-----GDG---V-WVSIRL  123 (151)
Q Consensus        61 -~~~pV~~m~~v~-~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~-----~~~~~I~~m~~~-----~~~---v-wis~~~  123 (151)
                       .+.||+++...+ +-+.+||. +++.|+|.+.=.+..+-....     .....|++|++.     +++   + .+.+.+
T Consensus        84 ~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn  163 (395)
T PF08596_consen   84 AKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN  163 (395)
T ss_dssp             --S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred             ccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence             148999999977 89999995 699999999888877744332     234568888776     332   3 445566


Q ss_pred             CCeEEEEeCC
Q psy16020        124 DSTLRMYNAH  133 (151)
Q Consensus       124 d~~l~lwd~~  133 (151)
                      .+.+..|...
T Consensus       164 ~G~v~~fkIl  173 (395)
T PF08596_consen  164 SGNVLTFKIL  173 (395)
T ss_dssp             TSEEEEEEEE
T ss_pred             CCCEEEEEEe
Confidence            6888777543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.10  E-value=0.21  Score=38.82  Aligned_cols=119  Identities=14%  Similarity=0.167  Sum_probs=72.5

Q ss_pred             eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEEeCCCCcEEEEE
Q psy16020         20 PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSLVVLKSF   97 (151)
Q Consensus        20 ~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vid~~t~~i~~~~   97 (151)
                      |....++++|+|+.+| |.+|+....     ..  ..++.. ..+|+-|..++  +.|-+=+++.++++|..++......
T Consensus         2 c~~~~~~~L~vGt~~G-l~~~~~~~~-----~~--~~~i~~-~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~   72 (275)
T PF00780_consen    2 CADSWGDRLLVGTEDG-LYVYDLSDP-----SK--PTRILK-LSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTS   72 (275)
T ss_pred             CcccCCCEEEEEECCC-EEEEEecCC-----cc--ceeEee-cceEEEEEEecccCEEEEEcCCccEEEEchhhcccccc
Confidence            5567788999999888 888887211     11  112221 15699999987  6777778899999999988765522


Q ss_pred             E----------e-cCCCCCceeEEE---EeCC--EEEEEEcCCCeEEEEeCC----cc-ceeeeEeCCccccc
Q psy16020         98 D----------A-HPRRESQVRQMT---WAGD--GVWVSIRLDSTLRMYNAH----TY-QHLQDVDIEPYVSK  149 (151)
Q Consensus        98 ~----------~-h~~~~~~I~~m~---~~~~--~vwis~~~d~~l~lwd~~----t~-~~l~~idi~~~v~~  149 (151)
                      .          . .-.....++..+   ....  -+-++.++  .|.+|...    .+ +..++|.+......
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk--~i~i~~~~~~~~~f~~~~ke~~lp~~~~~  143 (275)
T PF00780_consen   73 APLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKK--KILIYEWNDPRNSFSKLLKEISLPDPPSS  143 (275)
T ss_pred             ccccccccccccccccccCCeeEEeeccccccceEEEEEECC--EEEEEEEECCcccccceeEEEEcCCCcEE
Confidence            1          0 001112344444   1122  22344444  66666554    35 78899988765543

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2919|consensus

Probab=96.09  E-value=0.053  Score=44.44  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=57.7

Q ss_pred             EeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC-CCcEEEEEEecCC-CCCceeEEEEeCCE-EEEEEcCCCeEEE
Q psy16020         57 TLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK-SLVVLKSFDAHPR-RESQVRQMTWAGDG-VWVSIRLDSTLRM  129 (151)
Q Consensus        57 ~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~-t~~i~~~~~~h~~-~~~~I~~m~~~~~~-vwis~~~d~~l~l  129 (151)
                      .++.++.-|+-+...  +++|+.|..  .+|.+||++ +.+.+-.++.|.. ..+.|.- ...+.+ .+.|++.|+.|++
T Consensus       245 llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~F-Dld~~~~~LasG~tdG~V~v  323 (406)
T KOG2919|consen  245 LLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILF-DLDPKGEILASGDTDGSVRV  323 (406)
T ss_pred             eecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEE-ecCCCCceeeccCCCccEEE
Confidence            455667899999997  489999985  599999988 6778888888865 3444432 222333 3667779999999


Q ss_pred             EeCCc
Q psy16020        130 YNAHT  134 (151)
Q Consensus       130 wd~~t  134 (151)
                      ||..+
T Consensus       324 wdlk~  328 (406)
T KOG2919|consen  324 WDLKD  328 (406)
T ss_pred             EecCC
Confidence            99998

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=96.08  E-value=0.31  Score=45.86  Aligned_cols=119  Identities=13%  Similarity=0.111  Sum_probs=71.4

Q ss_pred             eeeeEEeC--CeEEEEec-CCcEEEEEcCCCCC-C----CC-CcceEEEeCCC---------CCceEEEeee-CCEEEEE
Q psy16020         18 ALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQ-W----DL-SKYHTVTLGLP---------HHSVRSLAAV-YNKVWCG   78 (151)
Q Consensus        18 V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~-w----d~-~~~~~i~l~~~---------~~pV~~m~~v-~~~Lw~g   78 (151)
                      +..|...+  +++|++-. |+.|.+|+...++. +    +. ........|+.         ..| ..|++. ++.||++
T Consensus       742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P-~Gvavd~dG~LYVA  820 (1057)
T PLN02919        742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHP-LGVLCAKDGQIYVA  820 (1057)
T ss_pred             ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCC-ceeeEeCCCcEEEE
Confidence            33455543  45888765 47899998753321 0    00 00001112210         134 355654 4679998


Q ss_pred             eC--CeEEEEeCCCCcEEEEEEec----C------CCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020         79 YK--NKIHVVDPKSLVVLKSFDAH----P------RRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        79 ~~--n~I~vid~~t~~i~~~~~~h----~------~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      ..  ++|.+||++++.+......-    .      ........|+++++ .++++-..++.|++||..+.+.
T Consensus       821 Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        821 DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            73  58999999998876443211    0      01124667777744 4699999999999999998765

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.06  E-value=0.22  Score=38.28  Aligned_cols=99  Identities=17%  Similarity=0.217  Sum_probs=62.2

Q ss_pred             eeeEEeC--CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCC
Q psy16020         19 LPPVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSL   91 (151)
Q Consensus        19 ~~i~~~~--~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~   91 (151)
                      .-|.+.+  +.+|++ ...+.|..|+.+.++. .+..++.+ .+.....-...|++- ++.||+++  +++|+++|++ +
T Consensus       137 NGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G  214 (246)
T PF08450_consen  137 NGIAFSPDGKTLYVADSFNGRIWRFDLDADGG-ELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-G  214 (246)
T ss_dssp             EEEEEETTSSEEEEEETTTTEEEEEEEETTTC-CEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-S
T ss_pred             cceEECCcchheeecccccceeEEEecccccc-ceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-c
Confidence            3455543  358865 4567799998865442 22333333 444311124566663 68999996  5799999998 9


Q ss_pred             cEEEEEEecCCCCCceeEEEEeCC---EEEEEEc
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWAGD---GVWVSIR  122 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~  122 (151)
                      ++...++.-.   ..++++++.|.   .+|++..
T Consensus       215 ~~~~~i~~p~---~~~t~~~fgg~~~~~L~vTta  245 (246)
T PF08450_consen  215 KLLREIELPV---PRPTNCAFGGPDGKTLYVTTA  245 (246)
T ss_dssp             CEEEEEE-SS---SSEEEEEEESTTSSEEEEEEB
T ss_pred             cEEEEEcCCC---CCEEEEEEECCCCCEEEEEeC
Confidence            9999888653   38899999643   4687765

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG0644|consensus

Probab=96.04  E-value=0.004  Score=56.10  Aligned_cols=105  Identities=14%  Similarity=0.125  Sum_probs=77.8

Q ss_pred             CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE--Ee-CCeEEEEeCCC
Q psy16020         16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC--GY-KNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~--g~-~n~I~vid~~t   90 (151)
                      .+|+|-.+.  +.+|+.|.-|-.+.||+-. ++      .+.-.+..+..-|+-|++..+.+-.  |+ +.-|.||...+
T Consensus       191 naVyca~fDrtg~~Iitgsdd~lvKiwS~e-t~------~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~  263 (1113)
T KOG0644|consen  191 NAVYCAIFDRTGRYIITGSDDRLVKIWSME-TA------RCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD  263 (1113)
T ss_pred             hheeeeeeccccceEeecCccceeeeeecc-ch------hhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence            467776663  4468888777777787732 11      1222444456889999998655433  33 33599999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      +.....+.+|+-   .|+++++++-.   |.+.|+++++||++
T Consensus       264 ~~pvsvLrghtg---avtaiafsP~~---sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  264 GAPVSVLRGHTG---AVTAIAFSPRA---SSSDDGTCRIWDAR  300 (1113)
T ss_pred             CchHHHHhcccc---ceeeeccCccc---cCCCCCceEecccc
Confidence            999999999985   99999999877   89999999999999

>KOG1409|consensus

Probab=96.02  E-value=0.17  Score=41.75  Aligned_cols=126  Identities=17%  Similarity=0.270  Sum_probs=77.0

Q ss_pred             CCCceeeeee--CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCC-------CC------------CCCcceEEE---
Q psy16020          4 PHPTPYPLNK--ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDG-------QW------------DLSKYHTVT---   57 (151)
Q Consensus         4 ~~~~~l~~i~--l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~-------~w------------d~~~~~~i~---   57 (151)
                      -+.|.=++|+  .|+++.++.|..+  ++|+|+-||++.-|....+=       .|            ++..-..+.   
T Consensus        55 ds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~  134 (404)
T KOG1409|consen   55 DSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGK  134 (404)
T ss_pred             cccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEecc
Confidence            3445555664  6789999999765  69999999999999775310       00            000000000   


Q ss_pred             --------------eCCCCCceEEEeeeC----CEEEEEe-CCeEEE--EeCCCCcEEEEEEecCCCCCceeEEEEe-CC
Q psy16020         58 --------------LGLPHHSVRSLAAVY----NKVWCGY-KNKIHV--VDPKSLVVLKSFDAHPRRESQVRQMTWA-GD  115 (151)
Q Consensus        58 --------------l~~~~~pV~~m~~v~----~~Lw~g~-~n~I~v--id~~t~~i~~~~~~h~~~~~~I~~m~~~-~~  115 (151)
                                    +|.  +-..|+..-.    ...++|- .++|..  +.........++.+|++   .+.++... ++
T Consensus       135 dk~~~~hc~e~~~~lg~--Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~---~~~~l~Wd~~~  209 (404)
T KOG1409|consen  135 DKQFAWHCTESGNRLGG--YNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTG---EVTCLKWDPGQ  209 (404)
T ss_pred             ccceEEEeeccCCcccc--eEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCccc---ceEEEEEcCCC
Confidence                          111  0001111100    1223332 233333  33557778888999987   89999998 66


Q ss_pred             EEEEEEcCCCeEEEEeCCc
Q psy16020        116 GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus       116 ~vwis~~~d~~l~lwd~~t  134 (151)
                      +++.|+..|..+.+||.--
T Consensus       210 ~~LfSg~~d~~vi~wdigg  228 (404)
T KOG1409|consen  210 RLLFSGASDHSVIMWDIGG  228 (404)
T ss_pred             cEEEeccccCceEEEeccC
Confidence            8899999999999999874

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.02  E-value=0.47  Score=36.41  Aligned_cols=100  Identities=14%  Similarity=0.128  Sum_probs=66.2

Q ss_pred             CCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeCCeEEEEeCCCCcEEEEEEec--
Q psy16020         25 QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNKIHVVDPKSLVVLKSFDAH--  100 (151)
Q Consensus        25 ~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h--  100 (151)
                      .+. .|+...+|.|..|+...      .....+.+.   .|.-+... -++.||++..+.+.++|+++++++.-+...  
T Consensus        11 ~g~l~~~D~~~~~i~~~~~~~------~~~~~~~~~---~~~G~~~~~~~g~l~v~~~~~~~~~d~~~g~~~~~~~~~~~   81 (246)
T PF08450_consen   11 DGRLYWVDIPGGRIYRVDPDT------GEVEVIDLP---GPNGMAFDRPDGRLYVADSGGIAVVDPDTGKVTVLADLPDG   81 (246)
T ss_dssp             TTEEEEEETTTTEEEEEETTT------TEEEEEESS---SEEEEEEECTTSEEEEEETTCEEEEETTTTEEEEEEEEETT
T ss_pred             CCEEEEEEcCCCEEEEEECCC------CeEEEEecC---CCceEEEEccCCEEEEEEcCceEEEecCCCcEEEEeeccCC
Confidence            345 45555688888887642      122233443   35444444 368999999988888899999887776652  


Q ss_pred             CCCCCceeEEEEeCCE-EEEEEcCC--------CeEEEEeCC
Q psy16020        101 PRRESQVRQMTWAGDG-VWVSIRLD--------STLRMYNAH  133 (151)
Q Consensus       101 ~~~~~~I~~m~~~~~~-vwis~~~d--------~~l~lwd~~  133 (151)
                      .......+.+++.++| +|++....        +.|..++..
T Consensus        82 ~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~  123 (246)
T PF08450_consen   82 GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD  123 (246)
T ss_dssp             CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT
T ss_pred             CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC
Confidence            2134679999999777 68887654        557777777

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1963|consensus

Probab=95.97  E-value=0.021  Score=51.35  Aligned_cols=77  Identities=16%  Similarity=0.163  Sum_probs=60.2

Q ss_pred             CEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020         73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK  149 (151)
Q Consensus        73 ~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~~  149 (151)
                      ..+.+-++|+|.|+...|+++.+.++.|..+.-++........ .-.++++.|+.|++||-+..+++..++..-+++.
T Consensus        29 k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~  106 (792)
T KOG1963|consen   29 KFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHA  106 (792)
T ss_pred             cEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeE
Confidence            4588888999999999999999999999874444433333332 2255999999999999999999999987766553

>KOG0300|consensus

Probab=95.94  E-value=0.22  Score=40.87  Aligned_cols=89  Identities=15%  Similarity=0.253  Sum_probs=61.4

Q ss_pred             CCCCc-ceEEEeC-CCCCceEEEeee-CCEEEEEeCC-eEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCE-EEEEE
Q psy16020         48 WDLSK-YHTVTLG-LPHHSVRSLAAV-YNKVWCGYKN-KIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDG-VWVSI  121 (151)
Q Consensus        48 wd~~~-~~~i~l~-~~~~pV~~m~~v-~~~Lw~g~~n-~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~-vwis~  121 (151)
                      ||+.+ .+.+.+. .+...|++..+. ++++.-|+++ .|+|||.+++. .+.++...    ++++.++++-.+ +..--
T Consensus       341 WDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtd----S~~NRvavs~g~~iIAiP  416 (481)
T KOG0300|consen  341 WDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTD----SPANRVAVSKGHPIIAIP  416 (481)
T ss_pred             ccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecC----CccceeEeecCCceEEec
Confidence            55542 2333332 456999999996 6889999986 79999999876 55555533    589999998555 44444


Q ss_pred             cCCCeEEEEeCCccceeeeE
Q psy16020        122 RLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       122 ~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+...|||||.. +..+..+
T Consensus       417 hDNRqvRlfDln-G~RlaRl  435 (481)
T KOG0300|consen  417 HDNRQVRLFDLN-GNRLARL  435 (481)
T ss_pred             cCCceEEEEecC-CCccccC
Confidence            555679999987 4444433

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=95.91  E-value=0.29  Score=40.28  Aligned_cols=121  Identities=19%  Similarity=0.221  Sum_probs=79.7

Q ss_pred             CCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCC-C----CCc-eEEEeee-CC-EEEEEe-C-CeEEEEeCCCCcE
Q psy16020         25 QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGL-P----HHS-VRSLAAV-YN-KVWCGY-K-NKIHVVDPKSLVV   93 (151)
Q Consensus        25 ~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~-~----~~p-V~~m~~v-~~-~Lw~g~-~-n~I~vid~~t~~i   93 (151)
                      +..||+|.=. |.|.||...++|.-..-.......+. |    .+| +.+..+- ++ .||+-+ | ++|++++.+.++.
T Consensus       100 g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L  179 (346)
T COG2706         100 GRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKL  179 (346)
T ss_pred             CCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcc
Confidence            3468877633 78999999887742111111111221 1    133 5565554 34 455444 3 7999999998887


Q ss_pred             EEEEEecCCCCCceeEEEEeCCEE--EEEEcCCCeEEEEeCCc----cceeeeEeCCc
Q psy16020         94 LKSFDAHPRRESQVRQMTWAGDGV--WVSIRLDSTLRMYNAHT----YQHLQDVDIEP  145 (151)
Q Consensus        94 ~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d~~l~lwd~~t----~~~l~~idi~~  145 (151)
                      ...-++.-.....-++|++.+++-  ++..--+++|.+|....    ++.+|.|+.-|
T Consensus       180 ~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP  237 (346)
T COG2706         180 TPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLP  237 (346)
T ss_pred             ccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCc
Confidence            766555545567789999997654  78888899999998765    67888887654

>KOG2695|consensus

Probab=95.86  E-value=0.026  Score=46.55  Aligned_cols=117  Identities=13%  Similarity=0.094  Sum_probs=72.9

Q ss_pred             eeeeeeCCCceeeeEEeCCeE--EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCC-e
Q psy16020          8 PYPLNKILDTALPPVHVQGRV--VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKN-K   82 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~~~~v--~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n-~   82 (151)
                      .+.++++|++-.|+-..+-.-  |....+-.+.+-++..+      ..+.+.   .++-|-++.+.  ++-|.+||.| .
T Consensus       205 ~~~SlQi~~a~~CawSlni~gyhfs~G~sqqv~L~nvetg------~~qsf~---sksDVfAlQf~~s~nLv~~GcRnge  275 (425)
T KOG2695|consen  205 MLCSLQIPKAWSCAWSLNIMGYHFSVGLSQQVLLTNVETG------HQQSFQ---SKSDVFALQFAGSDNLVFNGCRNGE  275 (425)
T ss_pred             ceeeecCCcchhhhhhhccceeeecccccceeEEEEeecc------cccccc---cchhHHHHHhcccCCeeEecccCCc
Confidence            356777777777654333222  32333444555554321      112222   23667777775  4679999986 7


Q ss_pred             EEEEeCCCC-----cEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccce
Q psy16020         83 IHVVDPKSL-----VVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        83 I~vid~~t~-----~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      |+++|.+..     ...++|. |.   +.|++|....  +.-+++-+-++.|+|||.+--++
T Consensus       276 I~~iDLR~rnqG~~~~a~rly-h~---Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~  333 (425)
T KOG2695|consen  276 IFVIDLRCRNQGNGWCAQRLY-HD---SSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKC  333 (425)
T ss_pred             EEEEEeeecccCCCcceEEEE-cC---cchhhhhhhccccceEeeccCcCceeEeeehhhhc
Confidence            999998864     3445555 53   4777776653  33388889999999999997666

>KOG1063|consensus

Probab=95.73  E-value=0.02  Score=50.63  Aligned_cols=74  Identities=20%  Similarity=0.292  Sum_probs=61.4

Q ss_pred             EeCCCCCceEEEeeeC--CEEEEEeC-----C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeE
Q psy16020         57 TLGLPHHSVRSLAAVY--NKVWCGYK-----N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTL  127 (151)
Q Consensus        57 ~l~~~~~pV~~m~~v~--~~Lw~g~~-----n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l  127 (151)
                      +|..+..-|.|++...  +-+.-+|.     + -|.+|++.+....+.++.|+-   .|+.|+++++|- ++|.++|.+.
T Consensus       520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsL---TVT~l~FSpdg~~LLsvsRDRt~  596 (764)
T KOG1063|consen  520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSL---TVTRLAFSPDGRYLLSVSRDRTV  596 (764)
T ss_pred             HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccce---EEEEEEECCCCcEEEEeecCceE
Confidence            4555568899999974  44666663     2 499999999999999999975   899999998877 8999999999


Q ss_pred             EEEeCC
Q psy16020        128 RMYNAH  133 (151)
Q Consensus       128 ~lwd~~  133 (151)
                      .||...
T Consensus       597 sl~~~~  602 (764)
T KOG1063|consen  597 SLYEVQ  602 (764)
T ss_pred             Eeeeee
Confidence            999875

>KOG1240|consensus

Probab=95.70  E-value=0.25  Score=46.66  Aligned_cols=125  Identities=13%  Similarity=0.029  Sum_probs=80.0

Q ss_pred             CceeeeEE--eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEee-e---CC-EEEEEeC-CeEEEE
Q psy16020         16 DTALPPVH--VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAA-V---YN-KVWCGYK-NKIHVV   86 (151)
Q Consensus        16 ~~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~-v---~~-~Lw~g~~-n~I~vi   86 (151)
                      ..+.++..  ..+++-+|..||.|.+++.+....-............ ...++..|.- .   .. .|-.+.. +.|..|
T Consensus      1099 sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1099 SRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred             CceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEe
Confidence            45655544  4557888999999999998742100000000111111 1255555544 2   24 3445554 689999


Q ss_pred             eCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCccceeeeE
Q psy16020         87 DPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |+.+....-+++ ++.....|+.++.++.+-| +.+...|.+-+||.+-..++...
T Consensus      1179 D~r~~~~~w~lk-~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw 1233 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLK-NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSW 1233 (1431)
T ss_pred             cchhhhhHHhhh-cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecc
Confidence            999988777777 3344678999999977665 66777999999999966665544

>PHA02713 hypothetical protein; Provisional

Probab=95.62  E-value=0.16  Score=44.42  Aligned_cols=66  Identities=8%  Similarity=0.100  Sum_probs=46.8

Q ss_pred             EEeeeCCEEEEEeC--------CeEEEEeCCC-CcE--EEEEEecCCCCCceeEEEEeCCEEEEEEcCCC--eEEEEeCC
Q psy16020         67 SLAAVYNKVWCGYK--------NKIHVVDPKS-LVV--LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS--TLRMYNAH  133 (151)
Q Consensus        67 ~m~~v~~~Lw~g~~--------n~I~vid~~t-~~i--~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~--~l~lwd~~  133 (151)
                      +++..+++||+-.|        +.+..+|+++ .+=  ...+..    ...-..++..++.+++.++.++  .+..||..
T Consensus       458 ~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~----~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~  533 (557)
T PHA02713        458 GVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES----RLSALHTILHDNTIMMLHCYESYMLQDTFNVY  533 (557)
T ss_pred             cEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc----ccccceeEEECCEEEEEeeecceeehhhcCcc
Confidence            57778999997654        2478999997 442  233321    2355677777999999999888  78888888


Q ss_pred             ccc
Q psy16020        134 TYQ  136 (151)
Q Consensus       134 t~~  136 (151)
                      |.+
T Consensus       534 ~~~  536 (557)
T PHA02713        534 TYE  536 (557)
T ss_pred             ccc
Confidence            754

>KOG4190|consensus

Probab=95.62  E-value=0.063  Score=46.95  Aligned_cols=131  Identities=12%  Similarity=0.107  Sum_probs=94.0

Q ss_pred             CCCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCC-----CCCCCcceEEEeCCCCCceEEEeeeCCE-
Q psy16020          2 EYPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDG-----QWDLSKYHTVTLGLPHHSVRSLAAVYNK-   74 (151)
Q Consensus         2 ~~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-----~wd~~~~~~i~l~~~~~pV~~m~~v~~~-   74 (151)
                      |+-+.+|-+..+-. .+|.+|-+....-+++.-||-|-+|+.-.+.     .|+.+      -| ...-|.|+.-++.. 
T Consensus       770 ~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk------~~-a~~~ikcl~nv~~~i  842 (1034)
T KOG4190|consen  770 EIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPK------EG-AGGNIKCLENVDRHI  842 (1034)
T ss_pred             ccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCcc------cC-CCceeEecccCcchh
Confidence            45556677777644 6899998887766788889999999864221     12211      11 12678888888876 


Q ss_pred             EEEEeC--CeEEEEeCCCCcEEEEEEec--CCCCCceeEEEEeCCEEEEEEcC-CCeEEEEeCCccceee
Q psy16020         75 VWCGYK--NKIHVVDPKSLVVLKSFDAH--PRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        75 Lw~g~~--n~I~vid~~t~~i~~~~~~h--~~~~~~I~~m~~~~~~vwis~~~-d~~l~lwd~~t~~~l~  139 (151)
                      |-+||.  .+|+.+|+++.+-...+.+.  +-+...+.++++.+.|-|++..- .+.|-.-|+++++.+.
T Consensus       843 liAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vIN  912 (1034)
T KOG4190|consen  843 LIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVIN  912 (1034)
T ss_pred             eeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceec
Confidence            667873  68999999999988888766  33446799999998888866554 5678888888887654

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=95.59  E-value=1  Score=36.70  Aligned_cols=117  Identities=15%  Similarity=0.161  Sum_probs=75.6

Q ss_pred             CCceeeeEE--eCCeEEEEec----CCcEEEEEcCCC-CCCCCCcceEEE-eCCCCCceEEEee--eCCEEEEEe--CCe
Q psy16020         15 LDTALPPVH--VQGRVVCALA----DGSVAIFRRGPD-GQWDLSKYHTVT-LGLPHHSVRSLAA--VYNKVWCGY--KNK   82 (151)
Q Consensus        15 ~~~V~~i~~--~~~~v~vgl~----nG~l~v~~~~~~-~~wd~~~~~~i~-l~~~~~pV~~m~~--v~~~Lw~g~--~n~   82 (151)
                      ......|..  .+++||+...    +|.|..|+...+ |..  +....+. .|.  .|+. +.+  -++.|+++.  ++.
T Consensus        36 ~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L--~~~~~~~~~g~--~p~~-i~~~~~g~~l~vany~~g~  110 (345)
T PF10282_consen   36 GENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTL--TLLNSVPSGGS--SPCH-IAVDPDGRFLYVANYGGGS  110 (345)
T ss_dssp             SSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEE--EEEEEEEESSS--CEEE-EEECTTSSEEEEEETTTTE
T ss_pred             CCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCccee--EEeeeeccCCC--CcEE-EEEecCCCEEEEEEccCCe
Confidence            345555555  5668999987    579999998765 432  2223344 333  6664 333  246799987  578


Q ss_pred             EEEEeCCC-CcEEEEEE--ec----C----CCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccc
Q psy16020         83 IHVVDPKS-LVVLKSFD--AH----P----RRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        83 I~vid~~t-~~i~~~~~--~h----~----~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~  136 (151)
                      |.+++... +++.....  .|    +    ......+++..+++  .+|++......|++|+.....
T Consensus       111 v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~  177 (345)
T PF10282_consen  111 VSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDT  177 (345)
T ss_dssp             EEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS
T ss_pred             EEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCC
Confidence            99998875 66555422  12    1    12346889988855  678888888899999997643

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG1310|consensus

Probab=95.51  E-value=0.092  Score=45.79  Aligned_cols=74  Identities=16%  Similarity=0.229  Sum_probs=58.8

Q ss_pred             eCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCCcEEEEEE-ecCCCCCceeEEEEe---CCEEEEEEcCCCeEEEE
Q psy16020         58 LGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLVVLKSFD-AHPRRESQVRQMTWA---GDGVWVSIRLDSTLRMY  130 (151)
Q Consensus        58 l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~---~~~vwis~~~d~~l~lw  130 (151)
                      |-.++.=|+|+.-..  +-|.-|+++ ++.|||+-..|....+. +|+.   .|++.++.   ++.+.+|+..|..|+||
T Consensus        46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHta---NIFsvKFvP~tnnriv~sgAgDk~i~lf  122 (758)
T KOG1310|consen   46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTA---NIFSVKFVPYTNNRIVLSGAGDKLIKLF  122 (758)
T ss_pred             hccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeeccccc---ceeEEeeeccCCCeEEEeccCcceEEEE
Confidence            334568899999975  335556655 79999999999888876 5764   78888877   67889999999999999


Q ss_pred             eCCc
Q psy16020        131 NAHT  134 (151)
Q Consensus       131 d~~t  134 (151)
                      |...
T Consensus       123 dl~~  126 (758)
T KOG1310|consen  123 DLDS  126 (758)
T ss_pred             eccc
Confidence            9985

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=95.49  E-value=1.1  Score=36.48  Aligned_cols=127  Identities=16%  Similarity=0.144  Sum_probs=79.9

Q ss_pred             CceeeeEE--eCCeEEEEe-cCCcEEEEEcCCCCCCCCCcc-eEEEe---CC-----CCCceEEEeee--CCEEEEEe-C
Q psy16020         16 DTALPPVH--VQGRVVCAL-ADGSVAIFRRGPDGQWDLSKY-HTVTL---GL-----PHHSVRSLAAV--YNKVWCGY-K   80 (151)
Q Consensus        16 ~~V~~i~~--~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~-~~i~l---~~-----~~~pV~~m~~v--~~~Lw~g~-~   80 (151)
                      ...-.|..  .++++|++- .+|++.+|+.+.+|.-  ... ..+..   +.     ...-..++.+.  ++.||+.. |
T Consensus        87 ~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l--~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG  164 (345)
T PF10282_consen   87 SSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSL--GEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG  164 (345)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEE--EEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred             CCcEEEEEecCCCEEEEEEccCCeEEEEEccCCccc--ceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence            44445555  355799986 5899999999876521  111 11211   10     01234566665  36799887 3


Q ss_pred             -CeEEEEeCCCC--cEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC----ccceeeeEeCC
Q psy16020         81 -NKIHVVDPKSL--VVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH----TYQHLQDVDIE  144 (151)
Q Consensus        81 -n~I~vid~~t~--~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~----t~~~l~~idi~  144 (151)
                       ++|++++.+..  ++...-.........-++|++.++  -+++....++.|.+|+..    +++.++.+..-
T Consensus       165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~  237 (345)
T PF10282_consen  165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTL  237 (345)
T ss_dssp             TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESC
T ss_pred             CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeec
Confidence             68888887643  354432222334567999999866  568999999999999998    56677777654

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG0650|consensus

Probab=95.42  E-value=0.03  Score=49.02  Aligned_cols=111  Identities=16%  Similarity=0.180  Sum_probs=82.5

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCC-
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPK-   89 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~-   89 (151)
                      ..|.+.+|++-  ++|||+.+ .|.+|+....     ...+.+.-|.  .=|..|++.  ++.|.+|+ ++++..+|.. 
T Consensus       567 G~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kq-----elvKkL~tg~--kwiS~msihp~GDnli~gs~d~k~~WfDldl  638 (733)
T KOG0650|consen  567 GLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQ-----ELVKKLLTGS--KWISSMSIHPNGDNLILGSYDKKMCWFDLDL  638 (733)
T ss_pred             CceeEEEecCCCceEEEEecc-ceEEEehhHH-----HHHHHHhcCC--eeeeeeeecCCCCeEEEecCCCeeEEEEccc
Confidence            57888888765  69999955 8999987521     1222223333  567788886  48888888 6799999987 


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      +-+.-+++.-|++   .++.+++-+. .++.|++.|+++.+||.+=|.-
T Consensus       639 sskPyk~lr~H~~---avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~D  684 (733)
T KOG0650|consen  639 SSKPYKTLRLHEK---AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYND  684 (733)
T ss_pred             CcchhHHhhhhhh---hhhhhhhccccceeeeecCCCcEEEEeeeeehh
Confidence            5668888888876   6777776644 5689999999999999986543

>KOG2079|consensus

Probab=95.41  E-value=0.12  Score=48.00  Aligned_cols=106  Identities=14%  Similarity=0.087  Sum_probs=73.8

Q ss_pred             CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCC
Q psy16020         15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSL   91 (151)
Q Consensus        15 ~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~   91 (151)
                      +..+.+..+...-+-+|.+-|+++.++..    |++... +-.. ..+.||+|+++..  ..+-+|.+ |-|.+||..+.
T Consensus        89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~----~nL~~~-~~ne-~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~  162 (1206)
T KOG2079|consen   89 AAGVISSAIVVVPIVIGTSHGHVLLSDMT----GNLGPL-HQNE-RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA  162 (1206)
T ss_pred             CcceeeeeeeeeeEEEEcCchhhhhhhhh----cccchh-hcCC-ccCCcceeeEecCCCceeccccCCCcEEEEEccCC
Confidence            34566667777778899999999998864    443320 1011 1359999999973  45778875 68999999999


Q ss_pred             cEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCe
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDST  126 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~  126 (151)
                      ++.+.+.-|.-+...|....+. ++.+.++..+.|.
T Consensus       163 k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  163 KILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             cceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence            9999988776555554444444 4455778888776

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=95.31  E-value=0.11  Score=28.59  Aligned_cols=30  Identities=17%  Similarity=0.251  Sum_probs=25.6

Q ss_pred             CCEEEEEeC--CeEEEEeCCCCcEEEEEEecC
Q psy16020         72 YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHP  101 (151)
Q Consensus        72 ~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~  101 (151)
                      +++||+++.  ++|.++|+.++++.+++....
T Consensus         3 ~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~   34 (42)
T TIGR02276         3 GTKLYVTNSGSNTVSVIDTATNKVIATIPVGG   34 (42)
T ss_pred             CCEEEEEeCCCCEEEEEECCCCeEEEEEECCC
Confidence            467999994  799999999999999998753

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>KOG4499|consensus

Probab=95.29  E-value=0.77  Score=36.43  Aligned_cols=49  Identities=14%  Similarity=0.309  Sum_probs=39.9

Q ss_pred             CCEEEEEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EE-EEEEcC
Q psy16020         72 YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GV-WVSIRL  123 (151)
Q Consensus        72 ~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~v-wis~~~  123 (151)
                      ++.||+++  +++|+-+|+.|+++++++.--++   +|++-++.|.  .+ ++++.+
T Consensus       222 eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~---qitsccFgGkn~d~~yvT~aa  275 (310)
T KOG4499|consen  222 EGNLYVATFNGGTVQKVDPTTGKILLEIKLPTP---QITSCCFGGKNLDILYVTTAA  275 (310)
T ss_pred             CCcEEEEEecCcEEEEECCCCCcEEEEEEcCCC---ceEEEEecCCCccEEEEEehh
Confidence            57899999  46999999999999999997765   8999999877  33 455443

>KOG4714|consensus

Probab=95.18  E-value=0.058  Score=43.02  Aligned_cols=117  Identities=17%  Similarity=0.178  Sum_probs=64.4

Q ss_pred             CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE-EeC--CeEEEEeCCCC
Q psy16020         15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC-GYK--NKIHVVDPKSL   91 (151)
Q Consensus        15 ~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~-g~~--n~I~vid~~t~   91 (151)
                      |+|-....-..+.|.+|.+||.+++|+-..    ++.....++.-....-=+|..-..+-|-. +||  |.+=-+-+.++
T Consensus        91 p~p~~~~s~~~t~V~~~~~dg~~~v~s~~~----~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~  166 (319)
T KOG4714|consen   91 IDPNDACTMTDNRVCIGYADGSLAVFSTDK----DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTL  166 (319)
T ss_pred             CCCcccccccCCceEecCCCceEEEEechH----HHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecc
Confidence            356666666678999999999999998642    22222222211100011121112222211 122  11111113456


Q ss_pred             cEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCcc
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~  135 (151)
                      +.+++|-...-....|+++...  .+.+.+.+.+|+.+-|||++..
T Consensus       167 ~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~  212 (319)
T KOG4714|consen  167 DPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV  212 (319)
T ss_pred             cccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccc
Confidence            6666666544344457777766  4466889999999999999853

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=95.11  E-value=1.6  Score=36.19  Aligned_cols=127  Identities=15%  Similarity=0.081  Sum_probs=86.2

Q ss_pred             CCCceeeeeeCCCceeeeEEe--CCeEEEEec---CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEE
Q psy16020          4 PHPTPYPLNKILDTALPPVHV--QGRVVCALA---DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVW   76 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~--~~~v~vgl~---nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw   76 (151)
                      .+.++++++.+......+.+.  ++++||+-+   ++++.+++....     .....+..|.  .| ..+++-  ++++|
T Consensus       104 ~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~-----~~~~~~~vG~--~P-~~~a~~p~g~~vy  175 (381)
T COG3391         104 ATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN-----KVTATIPVGN--TP-TGVAVDPDGNKVY  175 (381)
T ss_pred             cccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC-----eEEEEEecCC--Cc-ceEEECCCCCeEE
Confidence            456778888888777777664  568999998   578888876421     2223467776  67 555553  57799


Q ss_pred             EEe--CCeEEEEeCCCCcEEE-----EEEecCCCCCceeEEEEeCCEEEEEEcCC--CeEEEEeCCccceeee
Q psy16020         77 CGY--KNKIHVVDPKSLVVLK-----SFDAHPRRESQVRQMTWAGDGVWVSIRLD--STLRMYNAHTYQHLQD  140 (151)
Q Consensus        77 ~g~--~n~I~vid~~t~~i~~-----~~~~h~~~~~~I~~m~~~~~~vwis~~~d--~~l~lwd~~t~~~l~~  140 (151)
                      +..  .|.|.++|+.+..+.+     .......  -.-..+...|..++++...+  ..+...|+.+......
T Consensus       176 v~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~--P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~  246 (381)
T COG3391         176 VTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTG--PAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT  246 (381)
T ss_pred             EEecCCCeEEEEeCCCcceeccccccccccCCC--CceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence            998  5899999988888775     1222221  12333333466778887777  6899999998776665

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=94.91  E-value=0.21  Score=43.43  Aligned_cols=66  Identities=20%  Similarity=0.235  Sum_probs=50.3

Q ss_pred             CceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCC
Q psy16020         63 HSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~  133 (151)
                      .+|.|.+..  +++|-.||. +.|.+||..+...+.. . +   .-..+.+++-++ .+.+.+++.|.|.+||..
T Consensus       260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k-a---~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K-A---EFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             CcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e-e---cccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            678888886  477999994 6999999987654433 2 2   136777888755 458899999999999987

>KOG0974|consensus

Probab=94.90  E-value=0.36  Score=44.48  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=68.8

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CC-EEEEEeCC-eEEEEeCCCCcEEE-EEEecCC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YN-KVWCGYKN-KIHVVDPKSLVVLK-SFDAHPR  102 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~-~Lw~g~~n-~I~vid~~t~~i~~-~~~~h~~  102 (151)
                      ++.+|++-|.|.+|....+.     .| . .+-.+...|-.|... ++ .+...+++ .|.+|+.+|.+... +-=+|+.
T Consensus       147 ~i~~gsv~~~iivW~~~~dn-----~p-~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsa  219 (967)
T KOG0974|consen  147 YIASGSVFGEIIVWKPHEDN-----KP-I-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSA  219 (967)
T ss_pred             EEEeccccccEEEEeccccC-----Cc-c-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccc
Confidence            68888899999999886321     22 2 333345888888885 34 45555566 69999999999877 4445864


Q ss_pred             CCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020        103 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus       103 ~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                         .|-.....++ -.++.+.|.+.++|+..
T Consensus       220 ---Rvw~~~~~~n-~i~t~gedctcrvW~~~  246 (967)
T KOG0974|consen  220 ---RVWACCFLPN-RIITVGEDCTCRVWGVN  246 (967)
T ss_pred             ---eeEEEEeccc-eeEEeccceEEEEEecc
Confidence               5555556566 68899999999999544

>KOG4227|consensus

Probab=94.75  E-value=0.57  Score=39.57  Aligned_cols=116  Identities=10%  Similarity=0.038  Sum_probs=80.1

Q ss_pred             eeeeEEeC-Ce-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CC-CceEEEeee-CC-EEEEEe-CCeEEEEeCCC
Q psy16020         18 ALPPVHVQ-GR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PH-HSVRSLAAV-YN-KVWCGY-KNKIHVVDPKS   90 (151)
Q Consensus        18 V~~i~~~~-~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~-~pV~~m~~v-~~-~Lw~g~-~n~I~vid~~t   90 (151)
                      |..|.+.. ++ +..|..|-.+.+|....  .---..|+.|.+-. +. +.|.|+++. ++ .||-|- +++|..-|.+|
T Consensus        59 iNAlqFS~N~~~L~SGGDD~~~~~W~~de--~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt  136 (609)
T KOG4227|consen   59 INALQFSHNDRFLASGGDDMHGRVWNVDE--LMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET  136 (609)
T ss_pred             cceeeeccCCeEEeecCCcceeeeechHH--HHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc
Confidence            44444433 34 44444445677775431  11113556666643 33 789999996 44 488776 46899999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~  136 (151)
                      .+....+. |.+....|..|...+. ..+++..+++.+.+||.+..+
T Consensus       137 ~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~  182 (609)
T KOG4227|consen  137 KQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ  182 (609)
T ss_pred             ceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence            99888876 7776678999988854 569999999999999999755

>KOG0322|consensus

Probab=94.73  E-value=0.14  Score=40.92  Aligned_cols=122  Identities=12%  Similarity=0.117  Sum_probs=72.2

Q ss_pred             CceeeeEE--e-CC--eEEEEecCCcEEEEEcCCCCCCCCCcceEE----EeCCCCCceEEEeeeC--CEEEEEe-CCeE
Q psy16020         16 DTALPPVH--V-QG--RVVCALADGSVAIFRRGPDGQWDLSKYHTV----TLGLPHHSVRSLAAVY--NKVWCGY-KNKI   83 (151)
Q Consensus        16 ~~V~~i~~--~-~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i----~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I   83 (151)
                      ++|+|...  . +.  .+.+|-.+|.+..|+.+.+ .--++.|..-    ....+++||.++.+-.  ++=-.|+ +.++
T Consensus       151 gsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~-~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl  229 (323)
T KOG0322|consen  151 GSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTG-DKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKL  229 (323)
T ss_pred             CceeeeeccccccceEEEEEeccCCeEEEEEccCC-ceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccc
Confidence            36777752  1 12  3778889999999998642 1112222111    2223468999988853  3323344 3455


Q ss_pred             EEEeC--CCCcEE--EEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         84 HVVDP--KSLVVL--KSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        84 ~vid~--~t~~i~--~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ..|+.  .+++..  ++++.. +.  .|..+..- ...++.+.+-|..||+|+.+|.++|.-+
T Consensus       230 ~~~Sl~~s~gslq~~~e~~lk-np--Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL  289 (323)
T KOG0322|consen  230 VMYSLNHSTGSLQIRKEITLK-NP--GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL  289 (323)
T ss_pred             eeeeeccccCcccccceEEec-CC--CccceEEccCCcEEeecccCCcEEEEEeccCCchhhh
Confidence            55553  344433  333322 21  34444333 4567999999999999999999998754

>KOG0882|consensus

Probab=94.71  E-value=0.3  Score=41.69  Aligned_cols=119  Identities=13%  Similarity=0.168  Sum_probs=77.4

Q ss_pred             eeEEeCC----eEEEEecC-CcEEEEEcCCCCCCCCCcceE-EEeCCCCCceEEEeeeC--CE-EEEEeCCeEEEEeCC-
Q psy16020         20 PPVHVQG----RVVCALAD-GSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAVY--NK-VWCGYKNKIHVVDPK-   89 (151)
Q Consensus        20 ~i~~~~~----~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~-i~l~~~~~pV~~m~~v~--~~-Lw~g~~n~I~vid~~-   89 (151)
                      ++.|.++    .|-|++.+ |.+-||+-..++    .++.. .++.  .+||.+|-++.  +. +-..-++.|--|.++ 
T Consensus       102 ~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~----~q~~~fkklH--~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~  175 (558)
T KOG0882|consen  102 EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDF----CQDGYFKKLH--FSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG  175 (558)
T ss_pred             EEecCCCCeeeeEEeecccCCCcEEECCcCCc----Cccceecccc--cCceEEEEeeccccceeeccccceeEeecCCC
Confidence            3445566    56666654 778888755433    22222 2343  49999999973  33 222235789889877 


Q ss_pred             CCcEEEE-----------EEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         90 SLVVLKS-----------FDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        90 t~~i~~~-----------~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .+|--++           +.+.........++.++..+- |-....|..||.++..|+++.|+||=.
T Consensus       176 ~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~  242 (558)
T KOG0882|consen  176 PFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEV  242 (558)
T ss_pred             cccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhcc
Confidence            3432222           112222234678888888777 889999999999999999999999843

>KOG2315|consensus

Probab=94.68  E-value=1  Score=39.28  Aligned_cols=115  Identities=17%  Similarity=0.232  Sum_probs=76.9

Q ss_pred             eeeCC--CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCE-EEEEeCC
Q psy16020         11 LNKIL--DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNK-VWCGYKN   81 (151)
Q Consensus        11 ~i~l~--~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~-Lw~g~~n   81 (151)
                      +++|+  .+|.|.....+    -|.-|-.=.++++|+..-        --.+.++.  .|=++|.+.  ++- +.||-||
T Consensus       264 ~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~--------~~v~df~e--gpRN~~~fnp~g~ii~lAGFGN  333 (566)
T KOG2315|consen  264 SVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG--------KPVFDFPE--GPRNTAFFNPHGNIILLAGFGN  333 (566)
T ss_pred             EEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC--------CEeEeCCC--CCccceEECCCCCEEEEeecCC
Confidence            45566  68888888654    255555556788887642        12456665  898999986  344 5677775


Q ss_pred             ---eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEE-EEEc------CCCeEEEEeCCccceeeeE
Q psy16020         82 ---KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVW-VSIR------LDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        82 ---~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vw-is~~------~d~~l~lwd~~t~~~l~~i  141 (151)
                         .|-|||..+.+...++++-.   ..+..  ++++|-| +++.      -|+-+++||.. +..+.+-
T Consensus       334 L~G~mEvwDv~n~K~i~~~~a~~---tt~~e--W~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~  397 (566)
T KOG2315|consen  334 LPGDMEVWDVPNRKLIAKFKAAN---TTVFE--WSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEK  397 (566)
T ss_pred             CCCceEEEeccchhhccccccCC---ceEEE--EcCCCcEEEEEeccccEEecCCeEEEEec-Cceeehh
Confidence               79999999999999999763   34554  5555543 2322      37789999986 5555443

>KOG0650|consensus

Probab=94.66  E-value=0.064  Score=47.01  Aligned_cols=50  Identities=22%  Similarity=0.403  Sum_probs=42.0

Q ss_pred             EEecCCCCCceeEEEEeCCEEE-EEEcCCCeEEEEeCCccceeeeEeCCccccc
Q psy16020         97 FDAHPRRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK  149 (151)
Q Consensus        97 ~~~h~~~~~~I~~m~~~~~~vw-is~~~d~~l~lwd~~t~~~l~~idi~~~v~~  149 (151)
                      +.+|+.   .|.++.....|-| .|++.|++||+|-..|+.++..+.+...+.+
T Consensus       396 yrGHtg---~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~  446 (733)
T KOG0650|consen  396 YRGHTG---LVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRS  446 (733)
T ss_pred             EeccCC---eEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEE
Confidence            568875   8999999977775 6889999999999999999999887665543

>KOG2139|consensus

Probab=94.62  E-value=1  Score=37.60  Aligned_cols=121  Identities=13%  Similarity=0.138  Sum_probs=78.1

Q ss_pred             ceeeeeeCC--CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCC----cceEEEeC-C-CCCceEEEeeeC-CE
Q psy16020          7 TPYPLNKIL--DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLS----KYHTVTLG-L-PHHSVRSLAAVY-NK   74 (151)
Q Consensus         7 ~~l~~i~l~--~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~----~~~~i~l~-~-~~~pV~~m~~v~-~~   74 (151)
                      +|-..+|-+  ..|.|+.+.+.   .+-||. -+-|++|..+.-+.-+..    .-...++. + -+.||++|.-.+ +.
T Consensus       130 t~pt~Lks~sQrnvtclawRPlsaselavgC-r~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt  208 (445)
T KOG2139|consen  130 TCPTKLKSVSQRNVTCLAWRPLSASELAVGC-RAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGT  208 (445)
T ss_pred             CCCceecchhhcceeEEEeccCCcceeeeee-cceeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCC
Confidence            555666644  58999999764   577787 566899976532211110    00111111 1 139999999985 44


Q ss_pred             EEEE-e-CC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020         75 VWCG-Y-KN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN  131 (151)
Q Consensus        75 Lw~g-~-~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd  131 (151)
                      .|+. + ++ .|.|||+++++...-.   ..+...+..+..+++|= +.+.+-|+.-+||+
T Consensus       209 ~l~tAS~gsssi~iWdpdtg~~~pL~---~~glgg~slLkwSPdgd~lfaAt~davfrlw~  266 (445)
T KOG2139|consen  209 ILVTASFGSSSIMIWDPDTGQKIPLI---PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQ  266 (445)
T ss_pred             EEeecccCcceEEEEcCCCCCccccc---ccCCCceeeEEEcCCCCEEEEecccceeeeeh
Confidence            5543 3 54 7999999998854433   22345789999997765 56777799999993

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=94.59  E-value=1  Score=31.31  Aligned_cols=88  Identities=17%  Similarity=0.273  Sum_probs=58.4

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCC
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRR  103 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~  103 (151)
                      +.|+||..|..|.||+-.       +.  ..++.. ...|.+|...+ ++...|-.| +|=|++-.    ++-+-..+  
T Consensus        16 ~eLlvGs~D~~IRvf~~~-------e~--~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~----~RlWRiKS--   79 (111)
T PF14783_consen   16 NELLVGSDDFEIRVFKGD-------EI--VAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDRS----QRLWRIKS--   79 (111)
T ss_pred             ceEEEecCCcEEEEEeCC-------cE--EEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeCc----ceeeeecc--
Confidence            579999999999999853       12  223433 26788888875 666666664 89999762    23333332  


Q ss_pred             CCceeEEEEe---CCEE--EEEEcCCCeEEE
Q psy16020        104 ESQVRQMTWA---GDGV--WVSIRLDSTLRM  129 (151)
Q Consensus       104 ~~~I~~m~~~---~~~v--wis~~~d~~l~l  129 (151)
                      ..++++|...   ++|+  +|++..++.|.+
T Consensus        80 K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   80 KNQVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence            2367777766   5555  888888887753

>KOG0280|consensus

Probab=94.58  E-value=0.34  Score=39.25  Aligned_cols=113  Identities=19%  Similarity=0.224  Sum_probs=69.2

Q ss_pred             CceeeeEEe----CC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceE-EEee----eCCEEEEEeC-CeE
Q psy16020         16 DTALPPVHV----QG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR-SLAA----VYNKVWCGYK-NKI   83 (151)
Q Consensus        16 ~~V~~i~~~----~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~-~m~~----v~~~Lw~g~~-n~I   83 (151)
                      +.+++|+..    ++  .+..+-+.|.|-+|+.....    +....-.|...+..+. ++.+    .+.+++++-. +++
T Consensus        70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~----ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~  145 (339)
T KOG0280|consen   70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDE----SSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSI  145 (339)
T ss_pred             cccceeeeeeccCCccceeeeccccceEEEEeeccce----eeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcE
Confidence            356666553    22  36677788999999875321    1222223333223333 2222    2467888864 688


Q ss_pred             EEEeCCCCcEEE--EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         84 HVVDPKSLVVLK--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        84 ~vid~~t~~i~~--~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      .+++-..+.+++  ++++|.- +.=+-....-...+..++++|+.+..||.+
T Consensus       146 ~~v~~t~~~le~vq~wk~He~-E~Wta~f~~~~pnlvytGgDD~~l~~~D~R  196 (339)
T KOG0280|consen  146 SGVYETEMVLEKVQTWKVHEF-EAWTAKFSDKEPNLVYTGGDDGSLSCWDIR  196 (339)
T ss_pred             EEEecceeeeeecccccccce-eeeeeecccCCCceEEecCCCceEEEEEec
Confidence            888888777777  8888853 111222222244667799999999999999

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=94.54  E-value=2.4  Score=39.56  Aligned_cols=132  Identities=17%  Similarity=0.165  Sum_probs=80.5

Q ss_pred             CCCCCceeeeeeCCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceE---EEe--------CCCCCceEEE
Q psy16020          2 EYPHPTPYPLNKILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHT---VTL--------GLPHHSVRSL   68 (151)
Q Consensus         2 ~~~~~~~l~~i~l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~---i~l--------~~~~~pV~~m   68 (151)
                      .+|=|=+..++++|++|.++.+..+.  +.+-++||+|.+|.+.....|....|..   +..        ......++.+
T Consensus       413 ~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (928)
T PF04762_consen  413 VVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQL  492 (928)
T ss_pred             CCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEE
Confidence            46667788999999999999997665  9999999999999987666664433322   111        1123567777


Q ss_pred             eeeC-CEEEEEe-C----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020         69 AAVY-NKVWCGY-K----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus        69 ~~v~-~~Lw~g~-~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~  133 (151)
                      ...+ +.+.+-. .    +.|.+++....+...........+..+......+..- ++.-..+|.+...+..
T Consensus       493 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~  564 (928)
T PF04762_consen  493 AWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSD  564 (928)
T ss_pred             EEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecC
Confidence            7775 5544333 2    3677777643332222222222233555555554432 4555557777655544

>KOG2114|consensus

Probab=94.52  E-value=1.5  Score=40.18  Aligned_cols=135  Identities=10%  Similarity=0.061  Sum_probs=82.2

Q ss_pred             CCcee--eee---eCC---CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C
Q psy16020          5 HPTPY--PLN---KIL---DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N   73 (151)
Q Consensus         5 ~~~~l--~~i---~l~---~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~   73 (151)
                      +|+|+  +++   +.|   .++.+|.-+  -+.+.+|.+||.|..|+=+.  .=|-.....+.. ..+.||+.+++.. .
T Consensus       107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi--~RDrgsr~~~~~-~~~~pITgL~~~~d~  183 (933)
T KOG2114|consen  107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDI--LRDRGSRQDYSH-RGKEPITGLALRSDG  183 (933)
T ss_pred             CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcc--hhccccceeeec-cCCCCceeeEEecCC
Confidence            37888  222   233   244444433  34799999999999985321  001111111222 1249999999964 2


Q ss_pred             --EEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         74 --KVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        74 --~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                        .|+++.-++|.++... ++- -..+.+.+.+.+++|-..+...-=+-+.++..|.+||+..-.+...+++.
T Consensus       184 ~s~lFv~Tt~~V~~y~l~-gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~~~cfaf~~g  254 (933)
T KOG2114|consen  184 KSVLFVATTEQVMLYSLS-GRT-PSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGRGPCFAFEVG  254 (933)
T ss_pred             ceeEEEEecceeEEEEec-CCC-cceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCCcceeeeecCC
Confidence              3799999988888776 333 22222333346888888774432235667888999999987777777643

>PRK02888 nitrous-oxide reductase; Validated

Probab=94.38  E-value=0.53  Score=41.83  Aligned_cols=120  Identities=9%  Similarity=0.019  Sum_probs=77.7

Q ss_pred             CCCceeeeeeCCCce--eeeEEeCCeEEEEecC----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE
Q psy16020          4 PHPTPYPLNKILDTA--LPPVHVQGRVVCALAD----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC   77 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V--~~i~~~~~~v~vgl~n----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~   77 (151)
                      .+.+..|+|.++...  ..+-+.++++|+..-|    +++...+.+.       ....+.+.-  .-+......++..|+
T Consensus       223 etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e-------~d~~vvfni--~~iea~vkdGK~~~V  293 (635)
T PRK02888        223 ETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAE-------RDWVVVFNI--ARIEEAVKAGKFKTI  293 (635)
T ss_pred             ccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeecccc-------CceEEEEch--HHHHHhhhCCCEEEE
Confidence            345677888887533  2334456688888632    3566665431       112333322  222233333566777


Q ss_pred             EeCCeEEEEeCCC-----CcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccce
Q psy16020         78 GYKNKIHVVDPKS-----LVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        78 g~~n~I~vid~~t-----~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~  137 (151)
                      + +|+|.|+|..+     .++.+.+..-.    ..+.+..+++|  ++++...|+++-+.|+++.+.
T Consensus       294 ~-gn~V~VID~~t~~~~~~~v~~yIPVGK----sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~  355 (635)
T PRK02888        294 G-GSKVPVVDGRKAANAGSALTRYVPVPK----NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD  355 (635)
T ss_pred             C-CCEEEEEECCccccCCcceEEEEECCC----CccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence            4 78999999999     67888888653    67778888665  477888899999999998764

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=94.29  E-value=0.2  Score=29.33  Aligned_cols=41  Identities=12%  Similarity=0.148  Sum_probs=31.5

Q ss_pred             eeeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCC
Q psy16020          8 PYPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQW   48 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~w   48 (151)
                      .+..=.+++.|.++.+++.  -+-+|..+|.|.+|+.+-...|
T Consensus         4 ~~~~k~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~qriw   46 (47)
T PF12894_consen    4 QLGEKNLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQRIW   46 (47)
T ss_pred             eecccCCCCcEEEEEECCCCCEEEEEECCCeEEEEECCCcCcc
Confidence            3445568889999999876  4889999999999998533333

>PHA03098 kelch-like protein; Provisional

Probab=94.23  E-value=1.3  Score=38.00  Aligned_cols=120  Identities=13%  Similarity=0.079  Sum_probs=68.1

Q ss_pred             ceeeeeeCCCceeeeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          7 TPYPLNKILDTALPPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~n-------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      +.+..+..|-.-.+....++++|+.++-       ..+-.|+.. .+.|..-.+  ++.+   ..-.++...+++||+-.
T Consensus       371 ~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~--~p~~---r~~~~~~~~~~~iyv~G  444 (534)
T PHA03098        371 REEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLN-TNKWSKGSP--LPIS---HYGGCAIYHDGKIYVIG  444 (534)
T ss_pred             eeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCC-CCeeeecCC--CCcc---ccCceEEEECCEEEEEC
Confidence            3333343443334455678899987651       246777654 356753221  1111   11235677789988765


Q ss_pred             C----------CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020         80 K----------NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY  135 (151)
Q Consensus        80 ~----------n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~  135 (151)
                      |          +.++++|+++.+-...-.. .++   .-..+...++.+++.++.+     +.+..||..+.
T Consensus       445 G~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        445 GISYIDNIKVYNIVESYNPVTNKWTELSSLNFPR---INASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CccCCCCCcccceEEEecCCCCceeeCCCCCccc---ccceEEEECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence            4          2399999998764332111 111   2223444578888777654     57899998864

>KOG1409|consensus

Probab=94.21  E-value=0.5  Score=39.10  Aligned_cols=99  Identities=13%  Similarity=0.160  Sum_probs=70.3

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCc-EEEEEEecCC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLV-VLKSFDAHPR  102 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~-i~~~~~~h~~  102 (151)
                      +.|+|--.|.+..-+....+     .+-...+.++..+++|+.-.+  ..|+-|+ +.+|.+||.--.+ +...+.+|.+
T Consensus       167 ~~fvGd~~gqvt~lr~~~~~-----~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~  241 (404)
T KOG1409|consen  167 YAFVGDHSGQITMLKLEQNG-----CQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHND  241 (404)
T ss_pred             EEEecccccceEEEEEeecC-----CceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchh
Confidence            78888888877776654211     222335555558999998875  4577665 5689999987554 6677888876


Q ss_pred             CCCceeEEEEeCC-EEEEEEcCCCeEEEEeCC
Q psy16020        103 RESQVRQMTWAGD-GVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus       103 ~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~  133 (151)
                         .|+.+.+... .+++|++.|+.|.+||..
T Consensus       242 ---kV~~l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  242 ---KVQALSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             ---hhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence               6666655533 459999999999999976

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=94.20  E-value=1.4  Score=37.65  Aligned_cols=133  Identities=13%  Similarity=0.123  Sum_probs=63.4

Q ss_pred             ceeeeeeCCCceeeeEEe----------------CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEEeCCC--------
Q psy16020          7 TPYPLNKILDTALPPVHV----------------QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLP--------   61 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~----------------~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~--------   61 (151)
                      +.++++.+|..=..+.|.                .+++++ ||-.+.|.||+...+.    ..|+..++-.+        
T Consensus        53 qVIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dP----r~P~l~KvIe~~ev~~k~g  128 (461)
T PF05694_consen   53 QVIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDP----RKPRLHKVIEPEEVFEKTG  128 (461)
T ss_dssp             SEEEEEE-SSS---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-T----TS-EEEEEE-HHHHHHHH-
T ss_pred             cEEEEEeCCCCCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCC----CCCceEeeeCHHHHHhhcC
Confidence            677888888654555442                335555 5577899999987543    45555443221        


Q ss_pred             ---CCceEEEeeeCCEEEEEe-----C---CeEEEEeCCCCcEEEEEEecCCCCC---------ceeEEEEeCCEEE---
Q psy16020         62 ---HHSVRSLAAVYNKVWCGY-----K---NKIHVVDPKSLVVLKSFDAHPRRES---------QVRQMTWAGDGVW---  118 (151)
Q Consensus        62 ---~~pV~~m~~v~~~Lw~g~-----~---n~I~vid~~t~~i~~~~~~h~~~~~---------~I~~m~~~~~~vw---  118 (151)
                         .+.++|+.  ++++++++     |   +.+..+|.+|+++..+++.......         .=+.|..+.=|.+   
T Consensus       129 ~s~PHT~Hclp--~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~  206 (461)
T PF05694_consen  129 LSRPHTVHCLP--DGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMF  206 (461)
T ss_dssp             EEEEEEEEE-S--S--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHH
T ss_pred             CCCCceeeecC--CccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhc
Confidence               14455554  56666665     2   4699999999999999986432111         1112333211111   


Q ss_pred             ---------EEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        119 ---------VSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       119 ---------is~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                               ...+-...|.+||.++.+++|.||+-+
T Consensus       207 ~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~  242 (461)
T PF05694_consen  207 EKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGE  242 (461)
T ss_dssp             TT---TTTHHHH-S--EEEEEETTTTEEEEEEES-T
T ss_pred             ccCCChhHhhcccccCeEEEEECCCCcEeeEEecCC
Confidence                     111247889999999999999999853

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=94.17  E-value=0.38  Score=39.72  Aligned_cols=57  Identities=18%  Similarity=0.262  Sum_probs=43.2

Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEE-cCCCeEEEEeCCccceeeeEe
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSI-RLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~-~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|.++|++|++..++++.-.    .+..|.++.+  -.+++. ..++.|.+||+.|++++.+++
T Consensus       270 eVWv~D~~t~krv~Ri~l~~----~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~  329 (342)
T PF06433_consen  270 EVWVYDLKTHKRVARIPLEH----PIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE  329 (342)
T ss_dssp             EEEEEETTTTEEEEEEEEEE----EESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred             EEEEEECCCCeEEEEEeCCC----ccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence            59999999999999999532    5777888744  345554 568999999999999999885

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PHA03098 kelch-like protein; Provisional

Probab=94.13  E-value=1.2  Score=38.17  Aligned_cols=111  Identities=11%  Similarity=0.096  Sum_probs=63.7

Q ss_pred             eeeeEEeCCeEEEEecCC------cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--------CeE
Q psy16020         18 ALPPVHVQGRVVCALADG------SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--------NKI   83 (151)
Q Consensus        18 V~~i~~~~~~v~vgl~nG------~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--------n~I   83 (151)
                      -.+....++++|+-++.+      ++-.|+.. .++|....+  ++..   ..-.+++..++++|+..|        +.+
T Consensus       335 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--lp~~---r~~~~~~~~~~~iYv~GG~~~~~~~~~~v  408 (534)
T PHA03098        335 NPGVTVFNNRIYVIGGIYNSISLNTVESWKPG-ESKWREEPP--LIFP---RYNPCVVNVNNLIYVIGGISKNDELLKTV  408 (534)
T ss_pred             cceEEEECCEEEEEeCCCCCEecceEEEEcCC-CCceeeCCC--cCcC---CccceEEEECCEEEEECCcCCCCcccceE
Confidence            345556788888766532      35566653 456753221  1111   111244567899987654        469


Q ss_pred             EEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC--------CeEEEEeCCccc
Q psy16020         84 HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD--------STLRMYNAHTYQ  136 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d--------~~l~lwd~~t~~  136 (151)
                      +++|+.+.+-... ..-+ ....-.+++..++.+++.++.+        +.+..||..+.+
T Consensus       409 ~~yd~~t~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        409 ECFSLNTNKWSKG-SPLP-ISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             EEEeCCCCeeeec-CCCC-ccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            9999987654322 1111 1123345666688888877643        248899988643

>KOG3914|consensus

Probab=93.94  E-value=0.13  Score=42.78  Aligned_cols=79  Identities=16%  Similarity=0.133  Sum_probs=58.8

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE-EEEEeC-CeEEEEeCCCC
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK-VWCGYK-NKIHVVDPKSL   91 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~-Lw~g~~-n~I~vid~~t~   91 (151)
                      +.++++...++  ++..+=-|+.|.|-+..+     ....+.+.+|. ++=|..|.+.+++ ||-|+| +++++||.+++
T Consensus       152 Sml~dVavS~D~~~IitaDRDEkIRvs~ypa-----~f~IesfclGH-~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sg  225 (390)
T KOG3914|consen  152 SMLLDVAVSPDDQFIITADRDEKIRVSRYPA-----TFVIESFCLGH-KEFVSTISLTDNYLLLSGSGDKTLRLWDITSG  225 (390)
T ss_pred             hhhheeeecCCCCEEEEecCCceEEEEecCc-----ccchhhhcccc-HhheeeeeeccCceeeecCCCCcEEEEecccC
Confidence            56667766554  577777788888887652     12334567775 5889999999876 688887 58999999999


Q ss_pred             cEEEEEEec
Q psy16020         92 VVLKSFDAH  100 (151)
Q Consensus        92 ~i~~~~~~h  100 (151)
                      +..+++...
T Consensus       226 k~L~t~dl~  234 (390)
T KOG3914|consen  226 KLLDTCDLS  234 (390)
T ss_pred             Ccccccchh
Confidence            999888744

>KOG4649|consensus

Probab=93.84  E-value=2.2  Score=34.45  Aligned_cols=107  Identities=19%  Similarity=0.204  Sum_probs=72.2

Q ss_pred             CCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecC
Q psy16020         25 QGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHP  101 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~  101 (151)
                      +-.||+|.-.|.+...+..++. .|..      -+|.   .+.|-+. ++|.+-.||- +.+|+++.+||.....|.+-.
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~------ilg~---RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~   93 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEA------ILGV---RIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE   93 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeeh------hhCc---eeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehh
Confidence            4579999999988887765432 3532      2332   2223222 7999999996 589999999996656666442


Q ss_pred             CCCCcee-EEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        102 RRESQVR-QMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       102 ~~~~~I~-~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      .  -.+. .|..++.-+| .++.|...+.-|.+++.++.+..+
T Consensus        94 ~--vk~~a~~d~~~glIy-cgshd~~~yalD~~~~~cVykskc  133 (354)
T KOG4649|consen   94 T--VKVRAQCDFDGGLIY-CGSHDGNFYALDPKTYGCVYKSKC  133 (354)
T ss_pred             h--hccceEEcCCCceEE-EecCCCcEEEecccccceEEeccc
Confidence            2  1222 2344445556 889999999999999988876443

>KOG4714|consensus

Probab=93.79  E-value=0.078  Score=42.32  Aligned_cols=88  Identities=17%  Similarity=0.168  Sum_probs=59.4

Q ss_pred             CCCCCCcceEEEeCC-CCCceEEEeeeC---CEEEEEeC-CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEE
Q psy16020         46 GQWDLSKYHTVTLGL-PHHSVRSLAAVY---NKVWCGYK-NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWV  119 (151)
Q Consensus        46 ~~wd~~~~~~i~l~~-~~~pV~~m~~v~---~~Lw~g~~-n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwi  119 (151)
                      -.|++++.+.+.... .-..|.++....   ..+.||.+ +.|-+||.+.+. +...+.+|+.....|.---..++. +.
T Consensus       162 ~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~-Lf  240 (319)
T KOG4714|consen  162 YANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH-LF  240 (319)
T ss_pred             eeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh-ee
Confidence            457777766554332 113477777764   45888886 689999999875 344466887644455443344555 66


Q ss_pred             EEcCCCeEEEEeCCc
Q psy16020        120 SIRLDSTLRMYNAHT  134 (151)
Q Consensus       120 s~~~d~~l~lwd~~t  134 (151)
                      ++++|+.|--||+.+
T Consensus       241 t~sedGslw~wdas~  255 (319)
T KOG4714|consen  241 TCSEDGSLWHWDAST  255 (319)
T ss_pred             EecCCCcEEEEcCCC
Confidence            999999999999995

>PHA02790 Kelch-like protein; Provisional

Probab=93.79  E-value=1.8  Score=37.00  Aligned_cols=107  Identities=10%  Similarity=0.093  Sum_probs=62.8

Q ss_pred             eeeeEEeCCeEEEEec-CC---cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcE
Q psy16020         18 ALPPVHVQGRVVCALA-DG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVV   93 (151)
Q Consensus        18 V~~i~~~~~~v~vgl~-nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i   93 (151)
                      =.+....++++||-++ ++   ++-.|+.. ...|....+-..+     ..-.+++.++++||+..| ...++|+++.+=
T Consensus       355 ~~~~~~~~g~IYviGG~~~~~~~ve~ydp~-~~~W~~~~~m~~~-----r~~~~~~~~~~~IYv~GG-~~e~ydp~~~~W  427 (480)
T PHA02790        355 NPAVASINNVIYVIGGHSETDTTTEYLLPN-HDQWQFGPSTYYP-----HYKSCALVFGRRLFLVGR-NAEFYCESSNTW  427 (480)
T ss_pred             ccEEEEECCEEEEecCcCCCCccEEEEeCC-CCEEEeCCCCCCc-----cccceEEEECCEEEEECC-ceEEecCCCCcE
Confidence            3455667889998654 22   35667653 4567543321111     112366778999998654 467788887553


Q ss_pred             E--EEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020         94 L--KSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY  135 (151)
Q Consensus        94 ~--~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~  135 (151)
                      .  ..+. +++   .=..++..++.+++.++.+     ..+..||..+.
T Consensus       428 ~~~~~m~-~~r---~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        428 TLIDDPI-YPR---DNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             eEcCCCC-CCc---cccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence            2  2221 222   2234556688888888754     46788887754

>smart00320 WD40 WD40 repeats

Probab=93.75  E-value=0.24  Score=24.54  Aligned_cols=36  Identities=11%  Similarity=0.060  Sum_probs=26.9

Q ss_pred             CceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFR   41 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~   41 (151)
                      .+++..++.+ +.|.++.+.++  .+.+|..||.+.+|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3556666644 68999988654  788888899998874

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1524|consensus

Probab=93.66  E-value=2.5  Score=37.12  Aligned_cols=102  Identities=19%  Similarity=0.344  Sum_probs=69.1

Q ss_pred             eEEEEecCCcEEEEEcCC--------------CCCCCCCcceEEEeCCC-------------------CCceEEEeeeC-
Q psy16020         27 RVVCALADGSVAIFRRGP--------------DGQWDLSKYHTVTLGLP-------------------HHSVRSLAAVY-   72 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~--------------~~~wd~~~~~~i~l~~~-------------------~~pV~~m~~v~-   72 (151)
                      .+.+..+||.+.+.++..              .|.|+.+....+..|..                   ..||+|..--. 
T Consensus        77 ~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~  156 (737)
T KOG1524|consen   77 TLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPN  156 (737)
T ss_pred             eEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCC
Confidence            466777789998887762              46888877766666531                   37888888742 


Q ss_pred             --CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCC
Q psy16020         73 --NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        73 --~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~  133 (151)
                        +-|||..+. .|.-+-+. - -.-++.+|-   .-|-++.++. +.+-+|+++|-.-++||..
T Consensus       157 S~~vl~c~g~h~~IKpL~~n-~-k~i~WkAHD---GiiL~~~W~~~s~lI~sgGED~kfKvWD~~  216 (737)
T KOG1524|consen  157 SNSIVFCQGGHISIKPLAAN-S-KIIRWRAHD---GLVLSLSWSTQSNIIASGGEDFRFKIWDAQ  216 (737)
T ss_pred             CCceEEecCCeEEEeecccc-c-ceeEEeccC---cEEEEeecCccccceeecCCceeEEeeccc
Confidence              447766543 34433222 2 223577883   4788887774 4568899999999999998

>KOG1064|consensus

Probab=93.58  E-value=0.42  Score=47.03  Aligned_cols=55  Identities=9%  Similarity=0.201  Sum_probs=38.7

Q ss_pred             eEEEEeCC--CC-cEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         82 KIHVVDPK--SL-VVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        82 ~I~vid~~--t~-~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++-.||+.  .+ ....  .+|   +..++++++.+. .+++|++++|.++|||++..++...+
T Consensus      2316 n~~lwDtl~~~~~s~v~--~~H---~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2316 NVCLWDTLLPPMNSLVH--TCH---DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred             cccchhcccCcccceee--eec---CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence            46666643  11 1222  455   358999999965 56999999999999999977665544

>KOG0642|consensus

Probab=93.30  E-value=0.14  Score=44.37  Aligned_cols=70  Identities=17%  Similarity=0.251  Sum_probs=59.7

Q ss_pred             CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         73 NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        73 ~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +..+.+-.+ +|.++|-.++++..+..+|.+   .+++++..++|. +++++.|+.+++|......+.+++...+
T Consensus       502 ~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~---svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  502 DITFTAHEDRSIRFFDNKTGKILHSMVAHKD---SVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             CeeEecccCCceecccccccccchheeeccc---eecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence            445555555 799999999999999999987   899999997766 8999999999999999888888886443

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=93.11  E-value=3.1  Score=33.36  Aligned_cols=100  Identities=8%  Similarity=-0.040  Sum_probs=52.1

Q ss_pred             eeeEEeCCeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC------CeEEEE
Q psy16020         19 LPPVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------NKIHVV   86 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------n~I~vi   86 (151)
                      .+....++++|+..+.      ..+.+|+.. ...|..-.    ++......-.+++..+++||+-.|      +.++++
T Consensus       117 ~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~-~~~W~~~~----~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~y  191 (323)
T TIGR03548       117 GSACYKDGTLYVGGGNRNGKPSNKSYLFNLE-TQEWFELP----DFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKY  191 (323)
T ss_pred             ceEEEECCEEEEEeCcCCCccCceEEEEcCC-CCCeeECC----CCCCCCCCcceEEEECCEEEEEcCCCCccccceEEE
Confidence            4455678889887653      246667654 34574211    111100112245567889887654      247899


Q ss_pred             eCCCCcEEEEEEe----c-CCCCCceeEEEEeCCEEEEEEcCC
Q psy16020         87 DPKSLVVLKSFDA----H-PRRESQVRQMTWAGDGVWVSIRLD  124 (151)
Q Consensus        87 d~~t~~i~~~~~~----h-~~~~~~I~~m~~~~~~vwis~~~d  124 (151)
                      |+++.+-.. +..    + +.....-..++..++.+++.++.+
T Consensus       192 d~~~~~W~~-~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~  233 (323)
T TIGR03548       192 SPKKNQWQK-VADPTTDSEPISLLGAASIKINESLLLCIGGFN  233 (323)
T ss_pred             ecCCCeeEE-CCCCCCCCCceeccceeEEEECCCEEEEECCcC
Confidence            998765322 111    0 100011222344466778887765

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PRK02888 nitrous-oxide reductase; Validated

Probab=93.09  E-value=2.1  Score=38.16  Aligned_cols=110  Identities=14%  Similarity=0.143  Sum_probs=72.2

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCCCCc--------
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLV--------   92 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~--------   92 (151)
                      +++.|+  ++++|.|++-.....-+......|+++.  .| ..|.+.  +..++++.+  +.|.|||.++++        
T Consensus       288 GK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK--sP-HGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~  362 (635)
T PRK02888        288 GKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK--NP-HGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIK  362 (635)
T ss_pred             CCEEEE--CCCEEEEEECCccccCCcceEEEEECCC--Cc-cceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCC
Confidence            446666  3567999986531000123446677775  33 444554  467999885  789999999977        


Q ss_pred             ----EEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc----------cceeeeEeC
Q psy16020         93 ----VLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT----------YQHLQDVDI  143 (151)
Q Consensus        93 ----i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t----------~~~l~~idi  143 (151)
                          +..+.+.-    ..-.+-.+++.| .+.|.--|+.|-.|+..+          ...++.+|+
T Consensus       363 ~~~~vvaevevG----lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV  424 (635)
T PRK02888        363 PRDAVVAEPELG----LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDV  424 (635)
T ss_pred             ccceEEEeeccC----CCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccC
Confidence                35555543    233444677774 499999999999999987          355666654

>KOG1912|consensus

Probab=93.02  E-value=0.2  Score=45.42  Aligned_cols=110  Identities=16%  Similarity=0.235  Sum_probs=72.9

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCE--EEEEe----------CCeEEEEeCCCCcEE
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK--VWCGY----------KNKIHVVDPKSLVVL   94 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~--Lw~g~----------~n~I~vid~~t~~i~   94 (151)
                      -+-+|+.+|+|-|++...+.     ....+.+..  .-|+|+.-.++.  +=.||          .|.+.|-|..||.-+
T Consensus       439 LvAvGT~sGTV~vvdvst~~-----v~~~fsvht--~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk  511 (1062)
T KOG1912|consen  439 LVAVGTNSGTVDVVDVSTNA-----VAASFSVHT--SLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSK  511 (1062)
T ss_pred             eEEeecCCceEEEEEecchh-----hhhhhcccc--cceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccc
Confidence            47889999999999986321     223334433  677777665532  22332          378999999999865


Q ss_pred             EEEEecCCCCCceeEEEEeCCEEEE-EEcCCCeEEEEeCCccceeeeEeC
Q psy16020         95 KSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        95 ~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      +--.-....+++|..+..+..|-++ -.=++-.+.+||.+|..++++...
T Consensus       512 ~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~mS~  561 (1062)
T KOG1912|consen  512 RFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLMSL  561 (1062)
T ss_pred             ccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHHhh
Confidence            4432344457889999988555432 233567799999998888776543

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=92.95  E-value=4.6  Score=33.41  Aligned_cols=143  Identities=12%  Similarity=0.069  Sum_probs=88.6

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCC-CCceEEEee-e--CCE-EEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSLAA-V--YNK-VWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-~~pV~~m~~-v--~~~-Lw~   77 (151)
                      ....+.+.+|.+|+=++-.-.-+...+.-++||++.-+..+++|.-.   .+.-++.++ +.|+..-.. .  +++ +|.
T Consensus       125 l~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~---~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~  201 (342)
T PF06433_consen  125 LAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEA---QKSTKVFDPDDDPLFEHPAYSRDGGRLYFV  201 (342)
T ss_dssp             TTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEE---EEEEEESSTTTS-B-S--EEETTTTEEEEE
T ss_pred             CCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEe---EeeccccCCCCcccccccceECCCCeEEEE
Confidence            35678888999998666666667788899999999999999888532   233345442 356543332 2  355 678


Q ss_pred             EeCCeEEEEeCCCCc--EEEEEEecCC---------CCCceeEEEEeCCEEEEEEcC---------CCeEEEEeCCccce
Q psy16020         78 GYKNKIHVVDPKSLV--VLKSFDAHPR---------RESQVRQMTWAGDGVWVSIRL---------DSTLRMYNAHTYQH  137 (151)
Q Consensus        78 g~~n~I~vid~~t~~--i~~~~~~h~~---------~~~~I~~m~~~~~~vwis~~~---------d~~l~lwd~~t~~~  137 (151)
                      .+.++||-.|...-+  ..+.++.-++         ...++.......+.+++-...         +..|=+||..|.+.
T Consensus       202 Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~kr  281 (342)
T PF06433_consen  202 SYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKR  281 (342)
T ss_dssp             BTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEE
T ss_pred             ecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeE
Confidence            889999999876444  5556653321         112333322223333333322         23477889999999


Q ss_pred             eeeEeCCcccc
Q psy16020        138 LQDVDIEPYVS  148 (151)
Q Consensus       138 l~~idi~~~v~  148 (151)
                      +..|+++..+.
T Consensus       282 v~Ri~l~~~~~  292 (342)
T PF06433_consen  282 VARIPLEHPID  292 (342)
T ss_dssp             EEEEEEEEEES
T ss_pred             EEEEeCCCccc
Confidence            99998876543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG2394|consensus

Probab=92.90  E-value=1.5  Score=38.35  Aligned_cols=123  Identities=10%  Similarity=0.072  Sum_probs=81.2

Q ss_pred             CCceeeeEEeC---CeEEEEecCCcEEEEEcCC-----CCCCCC-CcceEEEeCC-----CCCceEEEe----------e
Q psy16020         15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGP-----DGQWDL-SKYHTVTLGL-----PHHSVRSLA----------A   70 (151)
Q Consensus        15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~-----~~~wd~-~~~~~i~l~~-----~~~pV~~m~----------~   70 (151)
                      +++|+||+...   +...++-++|.+..|+...     ...|.. ..+..+.+..     ...||.+..          +
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F  298 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF  298 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence            37999999865   4688999999999996531     112211 1111222211     014554444          4


Q ss_pred             eC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020         71 VY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        71 v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      .+  ..|.+-+ ++.++|||=.+.++...+...   .....|+.++++|- .+++++|-.|.+|-....+.+.-
T Consensus       299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY---FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR  369 (636)
T KOG2394|consen  299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSY---FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR  369 (636)
T ss_pred             cCCCceEEEEecCceEEEeeccHHHHHHHHHhh---ccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence            32  4577777 468999998888876655432   24688999999988 56788999999999887766543

>KOG4649|consensus

Probab=92.82  E-value=2.6  Score=33.97  Aligned_cols=88  Identities=14%  Similarity=0.101  Sum_probs=57.8

Q ss_pred             CCceeeeeeCCCceeeeE-EeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCC-
Q psy16020          5 HPTPYPLNKILDTALPPV-HVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-   81 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~-~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n-   81 (151)
                      +....|+--|.+.+-+=. -.+++|.+|.-+|.|.+...+.+ ..|++.....++..    |  -|.+-++-+|||+.+ 
T Consensus        42 sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~----a--~~d~~~glIycgshd~  115 (354)
T KOG4649|consen   42 SGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR----A--QCDFDGGLIYCGSHDG  115 (354)
T ss_pred             CCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc----e--EEcCCCceEEEecCCC
Confidence            445556665655444321 16889999999999999887765 35765433222221    1  244456789999965 


Q ss_pred             eEEEEeCCCCcEEEEEE
Q psy16020         82 KIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~   98 (151)
                      +.|++|+++..+....+
T Consensus       116 ~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen  116 NFYALDPKTYGCVYKSK  132 (354)
T ss_pred             cEEEecccccceEEecc
Confidence            89999999988665543

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=92.70  E-value=4.8  Score=32.95  Aligned_cols=134  Identities=14%  Similarity=0.140  Sum_probs=87.4

Q ss_pred             CCceeeeeeCCC---ceeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC
Q psy16020          5 HPTPYPLNKILD---TALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK   80 (151)
Q Consensus         5 ~~~~l~~i~l~~---~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~   80 (151)
                      +.+.+|+-+++.   -+-.....++.+|++..+|.+..++...+. .|..+.+..+.+.....|+    ..++.++.++.
T Consensus       130 ~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~----~~~~~vy~~~~  205 (370)
T COG1520         130 TGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPA----IASGTVYVGSD  205 (370)
T ss_pred             CCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCce----eecceEEEecC
Confidence            567788888888   333334456789999878999998875322 4653322112222212444    56788998887


Q ss_pred             C---eEEEEeCCCCcEEEEEEecCCCCCc-e-------eEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         81 N---KIHVVDPKSLVVLKSFDAHPRRESQ-V-------RQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        81 n---~I~vid~~t~~i~~~~~~h~~~~~~-I-------~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      +   .++.+|+++++..-+...+...... +       ......+.++ .....++.+...|..+++.+-+.+.
T Consensus       206 ~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~g~~~~l~~~~G~~~W~~~~  278 (370)
T COG1520         206 GYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGV-YAGSYGGKLLCLDADTGELIWSFPA  278 (370)
T ss_pred             CCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcE-EEEecCCeEEEEEcCCCceEEEEec
Confidence            4   7999999999988876544322211 1       1223335555 4666777799999999999999876

>KOG1334|consensus

Probab=92.70  E-value=0.16  Score=43.55  Aligned_cols=121  Identities=16%  Similarity=0.161  Sum_probs=84.5

Q ss_pred             CCceeeeEEe--CCeEEEEecCCcEEEEEcCC-CC-CCCCCc---ceEEE--eCC-CCCceEEEeeeC---CEEEEEeCC
Q psy16020         15 LDTALPPVHV--QGRVVCALADGSVAIFRRGP-DG-QWDLSK---YHTVT--LGL-PHHSVRSLAAVY---NKVWCGYKN   81 (151)
Q Consensus        15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~-~~-~wd~~~---~~~i~--l~~-~~~pV~~m~~v~---~~Lw~g~~n   81 (151)
                      |--|+|+.|.  ++.+.++-+|-.|..|+... .| .-+...   +..-.  -|. ....|.+.-+-+   +.+--|+++
T Consensus       336 ~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDC  415 (559)
T KOG1334|consen  336 PVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDC  415 (559)
T ss_pred             cccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCcc
Confidence            4578999997  45799999999999995542 22 112222   11111  121 125577777765   446677774


Q ss_pred             -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020         82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                       .|++|+-+++++.+-+++..   .-|+||.--+. -|+.|.+-|--||+|-..+-+..
T Consensus       416 GhIFiW~K~t~eii~~MegDr---~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~  471 (559)
T KOG1334|consen  416 GHIFIWDKKTGEIIRFMEGDR---HVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERA  471 (559)
T ss_pred             ceEEEEecchhHHHHHhhccc---ceEeccCCCCCCchhhccCCccceeeecCCccccc
Confidence             89999999999999999764   28999877654 66889999999999998665544

>PRK05137 tolB translocation protein TolB; Provisional

Probab=92.66  E-value=4.1  Score=34.14  Aligned_cols=80  Identities=11%  Similarity=0.047  Sum_probs=49.0

Q ss_pred             cceEEEeCCCCCceEEEeee--CCEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC
Q psy16020         52 KYHTVTLGLPHHSVRSLAAV--YNKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL  123 (151)
Q Consensus        52 ~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~  123 (151)
                      .++.+.-+.  .++.+....  +++|...+ .   ..|+++|.++++.. .+..+.   ..+....++++|  +.++.+.
T Consensus       193 ~~~~lt~~~--~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~---g~~~~~~~SPDG~~la~~~~~  266 (435)
T PRK05137        193 NVRYLTDGS--SLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFP---GMTFAPRFSPDGRKVVMSLSQ  266 (435)
T ss_pred             CcEEEecCC--CCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCC---CcccCcEECCCCCEEEEEEec
Confidence            344444443  788888776  35555443 2   47999999998864 344333   245566677555  4445554


Q ss_pred             C--CeEEEEeCCccce
Q psy16020        124 D--STLRMYNAHTYQH  137 (151)
Q Consensus       124 d--~~l~lwd~~t~~~  137 (151)
                      +  ..|.+||..+.+.
T Consensus       267 ~g~~~Iy~~d~~~~~~  282 (435)
T PRK05137        267 GGNTDIYTMDLRSGTT  282 (435)
T ss_pred             CCCceEEEEECCCCce
Confidence            4  4588889887654

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=92.57  E-value=1.9  Score=33.68  Aligned_cols=78  Identities=17%  Similarity=0.171  Sum_probs=50.9

Q ss_pred             CCCcceEEEeCCCCCceE---EEeeeCCEEEEEeC--CeEEEEeCCCCcEEEEEEecC---------CCCCceeEEEEeC
Q psy16020         49 DLSKYHTVTLGLPHHSVR---SLAAVYNKVWCGYK--NKIHVVDPKSLVVLKSFDAHP---------RRESQVRQMTWAG  114 (151)
Q Consensus        49 d~~~~~~i~l~~~~~pV~---~m~~v~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~---------~~~~~I~~m~~~~  114 (151)
                      ++.....+++-....||+   -+..|++.||+.-+  ++|-.||++||++...++...         +.....+-+++.+
T Consensus       159 tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~  238 (262)
T COG3823         159 TFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDP  238 (262)
T ss_pred             HhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecC
Confidence            455555666543235654   45567899998875  799999999999999988542         1122455566653


Q ss_pred             --CEEEEEEcCCCe
Q psy16020        115 --DGVWVSIRLDST  126 (151)
Q Consensus       115 --~~vwis~~~d~~  126 (151)
                        +..++++.+=+.
T Consensus       239 ~~~r~~iTGK~wp~  252 (262)
T COG3823         239 QQDRFLITGKLWPL  252 (262)
T ss_pred             cCCeEEEecCcCce
Confidence              345677665443

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=92.42  E-value=6.5  Score=34.21  Aligned_cols=103  Identities=14%  Similarity=0.293  Sum_probs=71.1

Q ss_pred             CCeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCC-eEEEEeCCCCcEEEEEEec
Q psy16020         25 QGRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        25 ~~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n-~I~vid~~t~~i~~~~~~h  100 (151)
                      ++.+.+|.-|| .|.||+...      ...+.+.-+-  .-|-+|....  +.+.+|..+ .|.++|.+|+.+. .++  
T Consensus       371 ~e~~vigt~dgD~l~iyd~~~------~e~kr~e~~l--g~I~av~vs~dGK~~vvaNdr~el~vididngnv~-~id--  439 (668)
T COG4946         371 PEGDVIGTNDGDKLGIYDKDG------GEVKRIEKDL--GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVR-LID--  439 (668)
T ss_pred             CcceEEeccCCceEEEEecCC------ceEEEeeCCc--cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCee-Eec--
Confidence            45788999999 799998642      1223333222  5577777753  457788765 7999999999863 222  


Q ss_pred             CCCCCceeEEEEeCCEEEEEEcC-----CCeEEEEeCCcccee
Q psy16020        101 PRRESQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHL  138 (151)
Q Consensus       101 ~~~~~~I~~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l  138 (151)
                      ......|+....++++-|++-+-     -..|+|||..+.+..
T Consensus       440 kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy  482 (668)
T COG4946         440 KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIY  482 (668)
T ss_pred             ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEE
Confidence            22346899999998888987664     346999999976543

>PLN02153 epithiospecifier protein

Probab=92.42  E-value=5  Score=32.46  Aligned_cols=112  Identities=16%  Similarity=0.139  Sum_probs=62.4

Q ss_pred             eeEEeCCeEEEEecC---C---------cEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeeeCCEEEEEeC-----
Q psy16020         20 PPVHVQGRVVCALAD---G---------SVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAVYNKVWCGYK-----   80 (151)
Q Consensus        20 ~i~~~~~~v~vgl~n---G---------~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v~~~Lw~g~~-----   80 (151)
                      +....++++|+-.+-   |         ++-+|+.. ...|..-.+    .+.  +...-.+++..+++||+-.|     
T Consensus       132 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~-~~~W~~l~~----~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~  206 (341)
T PLN02153        132 SMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIA-DGKWVQLPD----PGENFEKRGGAGFAVVQGKIWVVYGFATSI  206 (341)
T ss_pred             EEEEECCEEEEECCccCCCccCCCcccceEEEEECC-CCeEeeCCC----CCCCCCCCCcceEEEECCeEEEEecccccc
Confidence            345567777775442   1         46677654 345742111    111  01112356677888886321     


Q ss_pred             ----------CeEEEEeCCCCcEEEEEE-ecCCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCcc
Q psy16020         81 ----------NKIHVVDPKSLVVLKSFD-AHPRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTY  135 (151)
Q Consensus        81 ----------n~I~vid~~t~~i~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~  135 (151)
                                +.++++|+++.+=.+.-. +........+.++..++.+++.++..              +.+..||..+.
T Consensus       207 ~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~  286 (341)
T PLN02153        207 LPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL  286 (341)
T ss_pred             ccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence                      469999999877433211 11111234556667788888888852              36888998764


Q ss_pred             c
Q psy16020        136 Q  136 (151)
Q Consensus       136 ~  136 (151)
                      +
T Consensus       287 ~  287 (341)
T PLN02153        287 V  287 (341)
T ss_pred             E
Confidence            3

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=92.37  E-value=1.8  Score=36.71  Aligned_cols=84  Identities=6%  Similarity=0.031  Sum_probs=58.6

Q ss_pred             CCCCceEEEeeeC-CEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-------------------CEE
Q psy16020         60 LPHHSVRSLAAVY-NKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-------------------DGV  117 (151)
Q Consensus        60 ~~~~pV~~m~~v~-~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-------------------~~v  117 (151)
                      +...-+.++.+.. ++|.+.++  ++|.++|..++.+.+-+.+-.|.  +..=+....                   -.+
T Consensus       305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA--qc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L  382 (415)
T PF14655_consen  305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA--QCGWIEVPEEGDRDRSNSNSPKSSSRFALFL  382 (415)
T ss_pred             cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc--eEEEEEeecccccccccccccCCCCcceEEE
Confidence            3334456666654 45555566  59999999999999999877542  222222211                   123


Q ss_pred             EEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        118 WVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       118 wis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .|-.-+-+.|.+|+.+++..+..+++.+
T Consensus       383 vIyaprRg~lEvW~~~~g~Rv~a~~v~k  410 (415)
T PF14655_consen  383 VIYAPRRGILEVWSMRQGPRVAAFNVGK  410 (415)
T ss_pred             EEEeccCCeEEEEecCCCCEEEEEEeCC
Confidence            5677889999999999999999998855

>KOG3621|consensus

Probab=92.37  E-value=0.64  Score=41.50  Aligned_cols=112  Identities=13%  Similarity=0.162  Sum_probs=69.0

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe--CCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCc-
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--GLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLV-   92 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l--~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~-   92 (151)
                      .-+|.-..++++-+|.+-|.|..|.|..+      ....++-  ++...-++|+..++.-+.+|++ ++|-|+-....+ 
T Consensus        37 ~lTc~dst~~~l~~GsS~G~lyl~~R~~~------~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p  110 (726)
T KOG3621|consen   37 KLTCVDATEEYLAMGSSAGSVYLYNRHTG------EMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP  110 (726)
T ss_pred             EEEEeecCCceEEEecccceEEEEecCch------hhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence            44566667889999999999999999632      1112222  1111223333334455778886 578777655422 


Q ss_pred             EEEEEEecCCC--CCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020         93 VLKSFDAHPRR--ESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        93 i~~~~~~h~~~--~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t  134 (151)
                      -....-.|.+.  ...|+++.++.++. +.+++..|.|.+--..+
T Consensus       111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            11112222222  45899999998877 78999999987655443

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=92.34  E-value=1.3  Score=40.38  Aligned_cols=73  Identities=16%  Similarity=0.144  Sum_probs=50.6

Q ss_pred             eeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeE-----EE------------------EeCCEEEEEEcCC
Q psy16020         69 AAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQ-----MT------------------WAGDGVWVSIRLD  124 (151)
Q Consensus        69 ~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~-----m~------------------~~~~~vwis~~~d  124 (151)
                      +++++.||+++. ++|+.+|++|++.+=++............     +.                  .++..| +....|
T Consensus       191 lvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV-~~~T~D  269 (764)
T TIGR03074       191 LKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRI-ILPTSD  269 (764)
T ss_pred             EEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEE-EEecCC
Confidence            346899999885 79999999999988887755332111111     11                  112243 456679


Q ss_pred             CeEEEEeCCccceeeeEe
Q psy16020        125 STLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       125 ~~l~lwd~~t~~~l~~id  142 (151)
                      +.|.-.|++|++.+.+++
T Consensus       270 g~LiALDA~TGk~~W~fg  287 (764)
T TIGR03074       270 ARLIALDADTGKLCEDFG  287 (764)
T ss_pred             CeEEEEECCCCCEEEEec
Confidence            999999999999997653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=92.25  E-value=0.42  Score=26.42  Aligned_cols=24  Identities=21%  Similarity=0.314  Sum_probs=17.8

Q ss_pred             EEeeeCCEEEEEeC-CeEEEEeCCC
Q psy16020         67 SLAAVYNKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        67 ~m~~v~~~Lw~g~~-n~I~vid~~t   90 (151)
                      .+++.++.|++++. ++++.+|++|
T Consensus        16 ~~~v~~g~vyv~~~dg~l~ald~~t   40 (40)
T PF13570_consen   16 SPAVAGGRVYVGTGDGNLYALDAAT   40 (40)
T ss_dssp             --EECTSEEEEE-TTSEEEEEETT-
T ss_pred             CCEEECCEEEEEcCCCEEEEEeCCC
Confidence            34677899999996 6999999976

>KOG1334|consensus

Probab=92.18  E-value=0.32  Score=41.83  Aligned_cols=79  Identities=13%  Similarity=0.191  Sum_probs=61.3

Q ss_pred             CceEEEeee--CCEEEEEeCC-eEEEEeCC--CC----------cEEEE-EEecCCCCCceeEEEEeC--CEEEEEEcCC
Q psy16020         63 HSVRSLAAV--YNKVWCGYKN-KIHVVDPK--SL----------VVLKS-FDAHPRRESQVRQMTWAG--DGVWVSIRLD  124 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~n-~I~vid~~--t~----------~i~~~-~~~h~~~~~~I~~m~~~~--~~vwis~~~d  124 (151)
                      --|+|+++.  +++|-+++.. .||.++..  -|          +..++ +.+|.+. ..|..+.+-|  ..-.+|+++-
T Consensus       337 v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~-~TVKgVNFfGPrsEyVvSGSDC  415 (559)
T KOG1334|consen  337 VNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNS-RTVKGVNFFGPRSEYVVSGSDC  415 (559)
T ss_pred             ccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccc-cccceeeeccCccceEEecCcc
Confidence            668999997  3678888865 79999644  24          33444 8899774 4588888887  4447899999


Q ss_pred             CeEEEEeCCccceeeeEe
Q psy16020        125 STLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       125 ~~l~lwd~~t~~~l~~id  142 (151)
                      +.|-+|+-.++++++-..
T Consensus       416 GhIFiW~K~t~eii~~Me  433 (559)
T KOG1334|consen  416 GHIFIWDKKTGEIIRFME  433 (559)
T ss_pred             ceEEEEecchhHHHHHhh
Confidence            999999999999987654

>PHA02713 hypothetical protein; Provisional

Probab=92.17  E-value=3.1  Score=36.44  Aligned_cols=108  Identities=10%  Similarity=0.161  Sum_probs=62.1

Q ss_pred             ceeeeEEeCCeEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCce--EEEeeeCCEEEEEeC--------
Q psy16020         17 TALPPVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK--------   80 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~m~~v~~~Lw~g~~--------   80 (151)
                      .=.+....++++|+-++ +|     ++-.|+... ..|..-.+    +   ..|.  .+++..+++||+-.|        
T Consensus       343 ~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~-~~W~~~~~----m---p~~r~~~~~~~~~g~IYviGG~~~~~~~~  414 (557)
T PHA02713        343 CRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGD-DKWKMLPD----M---PIALSSYGMCVLDQYIYIIGGRTEHIDYT  414 (557)
T ss_pred             hceeEEEECCEEEEECCcCCCCCCceEEEEECCC-CeEEECCC----C---CcccccccEEEECCEEEEEeCCCcccccc
Confidence            34456677889988554 33     366676543 45743221    1   1122  244556889887543        


Q ss_pred             -----------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC------CeEEEEeCCc
Q psy16020         81 -----------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD------STLRMYNAHT  134 (151)
Q Consensus        81 -----------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d------~~l~lwd~~t  134 (151)
                                       +.+..+|+++.+=...-.-...  ..=..++..++.+++.++.+      +.+..||.++
T Consensus       415 ~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~--r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~  489 (557)
T PHA02713        415 SVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTG--TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT  489 (557)
T ss_pred             cccccccccccccccccceEEEECCCCCeEeecCCCCcc--cccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence                             3588999987653322111111  12235666788888887754      3578899887

>PF01011 PQQ: PQQ enzyme repeat family

Probab=92.16  E-value=0.52  Score=25.88  Aligned_cols=28  Identities=25%  Similarity=0.361  Sum_probs=23.2

Q ss_pred             CEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020         73 NKVWCGYK-NKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        73 ~~Lw~g~~-n~I~vid~~t~~i~~~~~~h  100 (151)
                      +.+++++. +.|+.+|++||+++=+++.-
T Consensus         1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~   29 (38)
T PF01011_consen    1 GRVYVGTPDGYLYALDAKTGKVLWKFQTG   29 (38)
T ss_dssp             TEEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred             CEEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence            46888874 69999999999998887754

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=91.90  E-value=2.3  Score=35.73  Aligned_cols=126  Identities=17%  Similarity=0.197  Sum_probs=67.8

Q ss_pred             ceeeeEEe----C--C----eEEEEecCCcEEEEEcC--CCCCCCCCcceEEEeCCCCCceEEEeeeC------------
Q psy16020         17 TALPPVHV----Q--G----RVVCALADGSVAIFRRG--PDGQWDLSKYHTVTLGLPHHSVRSLAAVY------------   72 (151)
Q Consensus        17 ~V~~i~~~----~--~----~v~vgl~nG~l~v~~~~--~~~~wd~~~~~~i~l~~~~~pV~~m~~v~------------   72 (151)
                      .|.+|.+.    +  +    .+|||...|.+.+|...  .+|.|..+........+  .||..|...+            
T Consensus       137 ~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~--~~i~~I~~i~~~~G~~a~At~~  214 (395)
T PF08596_consen  137 YVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHD--SPILSIIPINADTGESALATIS  214 (395)
T ss_dssp             -EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS------EEEEEETTT--B-B-BHH
T ss_pred             CeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCC--CceEEEEEEECCCCCcccCchh
Confidence            67677653    2  2    69999999999999775  44666544333331222  5555444331            


Q ss_pred             -----------CEEEEEe-CCeEEEEeCCCCcEE-EEEEecCCCCCceeEEE---EeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020         73 -----------NKVWCGY-KNKIHVVDPKSLVVL-KSFDAHPRRESQVRQMT---WAGDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        73 -----------~~Lw~g~-~n~I~vid~~t~~i~-~~~~~h~~~~~~I~~m~---~~~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                                 ..+++.+ ...|+|+.+-+.+.- +.|+.+. ....+..+.   ..+...++..-.++.+++|-.-..+
T Consensus       215 ~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~-~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk  293 (395)
T PF08596_consen  215 AMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPF-LCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK  293 (395)
T ss_dssp             HHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-E-EEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--
T ss_pred             HhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeecccc-ccceEEEEeecccCCceEEEEEECCCcEEEEECCCch
Confidence                       2355555 578999998876643 3342110 001111111   2245558999999999999999999


Q ss_pred             eeeeEeCCc
Q psy16020        137 HLQDVDIEP  145 (151)
Q Consensus       137 ~l~~idi~~  145 (151)
                      .+.++++-+
T Consensus       294 ei~~~~l~~  302 (395)
T PF08596_consen  294 EIKSVSLPP  302 (395)
T ss_dssp             EEEEEE-SS
T ss_pred             HhhcccCCC
Confidence            999998743

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2066|consensus

Probab=91.82  E-value=5.5  Score=36.38  Aligned_cols=107  Identities=18%  Similarity=0.243  Sum_probs=66.8

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-------EEEEEeCCeEEEEeCCCCcEEEEE
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-------KVWCGYKNKIHVVDPKSLVVLKSF   97 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-------~Lw~g~~n~I~vid~~t~~i~~~~   97 (151)
                      +.++-.+.-||++.|.....+     ++......   +.|+.++++..+       +...|..-.++.....=+.-+.+.
T Consensus        83 Gey~asCS~DGkv~I~sl~~~-----~~~~~~df---~rpiksial~Pd~~~~~sk~fv~GG~aglvL~er~wlgnk~~v  154 (846)
T KOG2066|consen   83 GEYVASCSDDGKVVIGSLFTD-----DEITQYDF---KRPIKSIALHPDFSRQQSKQFVSGGMAGLVLSERNWLGNKDSV  154 (846)
T ss_pred             CceEEEecCCCcEEEeeccCC-----ccceeEec---CCcceeEEeccchhhhhhhheeecCcceEEEehhhhhcCccce
Confidence            334555555566666554311     12222222   478899888643       344443212555443335555666


Q ss_pred             EecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         98 DAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ..|. .+.+|.++.+-|+  +|+-.+|-=+++||+.+.+.+..|.
T Consensus       155 ~l~~-~eG~I~~i~W~g~--lIAWand~Gv~vyd~~~~~~l~~i~  196 (846)
T KOG2066|consen  155 VLSE-GEGPIHSIKWRGN--LIAWANDDGVKVYDTPTRQRLTNIP  196 (846)
T ss_pred             eeec-CccceEEEEecCc--EEEEecCCCcEEEeccccceeeccC
Confidence            6664 4789999999777  5666788889999999999998883

>KOG1354|consensus

Probab=91.55  E-value=1.6  Score=36.34  Aligned_cols=40  Identities=20%  Similarity=0.255  Sum_probs=29.6

Q ss_pred             ceeEEEEeCCEEEEEEcCCCeEEEEeCCc-cceeeeEeCCc
Q psy16020        106 QVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEP  145 (151)
Q Consensus       106 ~I~~m~~~~~~vwis~~~d~~l~lwd~~t-~~~l~~idi~~  145 (151)
                      .|+.+.+..++--.--.+|=.|.||+.+- -+.-..+||.|
T Consensus       166 hiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP  206 (433)
T KOG1354|consen  166 HINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKP  206 (433)
T ss_pred             EeeeeeecCccceEeeccceeeeeccccccCCceeEEEccc
Confidence            57777777666533445688899999984 66677788888

>KOG1524|consensus

Probab=91.41  E-value=0.13  Score=44.77  Aligned_cols=55  Identities=20%  Similarity=0.450  Sum_probs=43.8

Q ss_pred             EEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020         75 VWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus        75 Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~  133 (151)
                      +-|.+++++.++ .+++++|++.++|..   .|.+=.++++|- +++.++|+.|++|--.
T Consensus        79 ~i~s~DGkf~il-~k~~rVE~sv~AH~~---A~~~gRW~~dGtgLlt~GEDG~iKiWSrs  134 (737)
T KOG1524|consen   79 LICSNDGRFVIL-NKSARVERSISAHAA---AISSGRWSPDGAGLLTAGEDGVIKIWSRS  134 (737)
T ss_pred             EEEcCCceEEEe-cccchhhhhhhhhhh---hhhhcccCCCCceeeeecCCceEEEEecc
Confidence            556668899888 568999999999964   666666665544 7899999999999754

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=91.32  E-value=13  Score=35.18  Aligned_cols=121  Identities=12%  Similarity=0.086  Sum_probs=67.3

Q ss_pred             eeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCC-cceEEEe-CC-----CCCceEEEeee--CCEEEEEeC--CeEE
Q psy16020         19 LPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLS-KYHTVTL-GL-----PHHSVRSLAAV--YNKVWCGYK--NKIH   84 (151)
Q Consensus        19 ~~i~~~--~~~v~vgl~-nG~l~v~~~~~~~~wd~~-~~~~i~l-~~-----~~~pV~~m~~v--~~~Lw~g~~--n~I~   84 (151)
                      .++...  ++.+|++-+ ++.|.+|+...+..-.+. ....... +.     .-..-+.|++.  ++.||++..  ++|.
T Consensus       686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Ir  765 (1057)
T PLN02919        686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIR  765 (1057)
T ss_pred             eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEE
Confidence            455555  468888864 567888876421100000 0000000 00     00122456665  356998873  5899


Q ss_pred             EEeCCCCcEEEEEEecC------------C------CCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020         85 VVDPKSLVVLKSFDAHP------------R------RESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~------------~------~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      +||++++.......+..            +      .......|+++++| +|++-..+..|++||..+.....
T Consensus       766 v~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t  839 (1057)
T PLN02919        766 ALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT  839 (1057)
T ss_pred             EEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE
Confidence            99999876421111000            0      01124567777654 79999999999999998766553

>KOG2063|consensus

Probab=91.30  E-value=0.084  Score=48.40  Aligned_cols=81  Identities=9%  Similarity=0.012  Sum_probs=58.8

Q ss_pred             eCCCcee-eeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCc----ceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEE
Q psy16020         13 KILDTAL-PPVHVQGRVVCALADGSVAIFRRGPDGQWDLSK----YHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHV   85 (151)
Q Consensus        13 ~l~~~V~-~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~----~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~v   85 (151)
                      ++|..|. |+.-.++.||+|+-+|+|..|...+.+.-+...    +..+.-.-.++||+.|....  +.+.+-|++.|.+
T Consensus        13 ~~~~~vd~~va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~dsqi~~   92 (877)
T KOG2063|consen   13 RLPLEVDLCVAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILSDSQIAV   92 (877)
T ss_pred             hcCCccchHHHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheecCCccee
Confidence            4666777 999999999999999999999887543211111    01111111259999999975  6689999999999


Q ss_pred             EeCCCCcE
Q psy16020         86 VDPKSLVV   93 (151)
Q Consensus        86 id~~t~~i   93 (151)
                      .+..+++-
T Consensus        93 ~~l~~~~~  100 (877)
T KOG2063|consen   93 HKLPELEP  100 (877)
T ss_pred             eecCcccc
Confidence            99887775

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=91.24  E-value=0.82  Score=24.95  Aligned_cols=32  Identities=13%  Similarity=0.248  Sum_probs=28.3

Q ss_pred             CCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        114 GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       114 ~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +..+|++...++.|.++|+.+++.+..|++..
T Consensus         3 ~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~   34 (42)
T TIGR02276         3 GTKLYVTNSGSNTVSVIDTATNKVIATIPVGG   34 (42)
T ss_pred             CCEEEEEeCCCCEEEEEECCCCeEEEEEECCC
Confidence            56689999999999999999999999998753

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=91.23  E-value=4.5  Score=34.57  Aligned_cols=65  Identities=15%  Similarity=0.299  Sum_probs=37.7

Q ss_pred             CE-EEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE--EEcCCCeEEEEeCC------------ccce
Q psy16020         73 NK-VWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV--SIRLDSTLRMYNAH------------TYQH  137 (151)
Q Consensus        73 ~~-Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi--s~~~d~~l~lwd~~------------t~~~  137 (151)
                      +. |-+.+.+.|..+|.+++++.+++...     .|..+.++++|-.+  .+++.-.|.=+|.+            .++.
T Consensus       117 G~LL~~~~~~~i~~yDw~~~~~i~~i~v~-----~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~  191 (443)
T PF04053_consen  117 GNLLGVKSSDFICFYDWETGKLIRRIDVS-----AVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFEL  191 (443)
T ss_dssp             SSSEEEEETTEEEEE-TTT--EEEEESS------E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEE
T ss_pred             CcEEEEECCCCEEEEEhhHcceeeEEecC-----CCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEE
Confidence            44 44444567999999999999999955     58999999664444  44444444446666            6677


Q ss_pred             eeeEe
Q psy16020        138 LQDVD  142 (151)
Q Consensus       138 l~~id  142 (151)
                      +.+|+
T Consensus       192 ~~E~~  196 (443)
T PF04053_consen  192 IHEIS  196 (443)
T ss_dssp             EEEE-
T ss_pred             EEEec
Confidence            77764

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PLN02193 nitrile-specifier protein

Probab=91.01  E-value=8.7  Score=32.79  Aligned_cols=112  Identities=16%  Similarity=0.105  Sum_probs=63.8

Q ss_pred             eeeEEeCCeEEEEecC-C-----cEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeeeCCEEEEEeC------CeEE
Q psy16020         19 LPPVHVQGRVVCALAD-G-----SVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAVYNKVWCGYK------NKIH   84 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~n-G-----~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v~~~Lw~g~~------n~I~   84 (151)
                      .++...++++|+-.+- +     .+-+|+.. ...|..-.+    .+..  ...-.+++.+++++|+-.|      +.++
T Consensus       272 h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~-t~~W~~~~~----~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~  346 (470)
T PLN02193        272 HSMAADEENVYVFGGVSATARLKTLDSYNIV-DKKWFHCST----PGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVH  346 (470)
T ss_pred             eEEEEECCEEEEECCCCCCCCcceEEEEECC-CCEEEeCCC----CCCCCCCCCCcEEEEECCcEEEEECCCCCccCceE
Confidence            3445567777776543 2     35566653 345642111    0110  0112345667888886544      6799


Q ss_pred             EEeCCCCcEEEEEEec--CCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCccc
Q psy16020         85 VVDPKSLVVLKSFDAH--PRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTYQ  136 (151)
Q Consensus        85 vid~~t~~i~~~~~~h--~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~~  136 (151)
                      ++|+++.+-.+. ...  ......-.+++..++.+++.++.+              +.+..||..|.+
T Consensus       347 ~yD~~t~~W~~~-~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~  413 (470)
T PLN02193        347 YYDPVQDKWTQV-ETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQ  413 (470)
T ss_pred             EEECCCCEEEEe-ccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCE
Confidence            999998775432 211  111234556666788888888853              358899998754

>KOG4227|consensus

Probab=90.97  E-value=1.2  Score=37.77  Aligned_cols=80  Identities=13%  Similarity=0.046  Sum_probs=58.0

Q ss_pred             CCCceEEEeeeCCEEEEEeCC---eEEEEeCCCC------cEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEE
Q psy16020         61 PHHSVRSLAAVYNKVWCGYKN---KIHVVDPKSL------VVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMY  130 (151)
Q Consensus        61 ~~~pV~~m~~v~~~Lw~g~~n---~I~vid~~t~------~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lw  130 (151)
                      +..=|+.+.+.++-=|.++|+   .+.+|+.+-+      +...-.+-|.+  +.|+|+++. ++....|+.+++++.+-
T Consensus        55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~--SNIF~L~F~~~N~~~~SG~~~~~VI~H  132 (609)
T KOG4227|consen   55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHR--SNIFSLEFDLENRFLYSGERWGTVIKH  132 (609)
T ss_pred             hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccc--cceEEEEEccCCeeEecCCCcceeEee
Confidence            457788899987666777753   6999997643      33333333332  589999998 56668899999999999


Q ss_pred             eCCccceeeeEe
Q psy16020        131 NAHTYQHLQDVD  142 (151)
Q Consensus       131 d~~t~~~l~~id  142 (151)
                      |++|.+.+.-.+
T Consensus       133 DiEt~qsi~V~~  144 (609)
T KOG4227|consen  133 DIETKQSIYVAN  144 (609)
T ss_pred             ecccceeeeeec
Confidence            999987765543

>KOG2394|consensus

Probab=90.80  E-value=1.8  Score=37.82  Aligned_cols=110  Identities=17%  Similarity=0.295  Sum_probs=66.5

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeCC-------------
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPK-------------   89 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~~-------------   89 (151)
                      .+.+|...|.+..++...   -++.........-.+..|+|+.-+  ++.++...  .+..|++|.+             
T Consensus       187 dllIGf~tGqvq~idp~~---~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~  263 (636)
T KOG2394|consen  187 DLLIGFTTGQVQLIDPIN---FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQAL  263 (636)
T ss_pred             ceEEeeccCceEEecchh---hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccccc
Confidence            488888889988887542   011110011111124889999887  24455443  3678888532             


Q ss_pred             ----CCcEEEEEEecCC--------CCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceee
Q psy16020         90 ----SLVVLKSFDAHPR--------RESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        90 ----t~~i~~~~~~h~~--------~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~  139 (151)
                          .+.+...+...++        ....|+...++++|- +.+.++|+.||+||-.+-+++.
T Consensus       264 k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg  326 (636)
T KOG2394|consen  264 KDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLG  326 (636)
T ss_pred             CCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHH
Confidence                1222222221111        134788888888888 7889999999999999877654

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=90.68  E-value=1.9  Score=33.19  Aligned_cols=41  Identities=5%  Similarity=-0.076  Sum_probs=36.8

Q ss_pred             CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCC
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGP   44 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~   44 (151)
                      +..+.+..|.|+.++..|...++++.+=+++|.+.||+...
T Consensus         1 sGrrl~P~i~Lgs~~~~l~~~~~~Ll~iT~~G~l~vWnl~~   41 (219)
T PF07569_consen    1 SGRRLLPPIVLGSPVSFLECNGSYLLAITSSGLLYVWNLKK   41 (219)
T ss_pred             CCccccCcEecCCceEEEEeCCCEEEEEeCCCeEEEEECCC
Confidence            35677899999999999999999999999999999998864

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=90.68  E-value=12  Score=33.65  Aligned_cols=136  Identities=14%  Similarity=0.138  Sum_probs=88.9

Q ss_pred             eeeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEc---------CC----CCC-------CCCC---------------
Q psy16020          9 YPLNKILDTALPPVHV--QGRVVCALADGSVAIFRR---------GP----DGQ-------WDLS---------------   51 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~---------~~----~~~-------wd~~---------------   51 (151)
                      .-++++.+.|..|+..  ++.+|+-+.||.|-.|+.         .-    .+.       -+++               
T Consensus       123 ~~~~kl~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~  202 (670)
T PF10395_consen  123 EFELKLDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLS  202 (670)
T ss_pred             eEEEEcccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcC
Confidence            4467888999999987  568999999999999999         20    000       0000               


Q ss_pred             ----cceEEEeCCCCCceEEE---------------eeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecC----CCCCcee
Q psy16020         52 ----KYHTVTLGLPHHSVRSL---------------AAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHP----RRESQVR  108 (151)
Q Consensus        52 ----~~~~i~l~~~~~pV~~m---------------~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~----~~~~~I~  108 (151)
                          ..+.+.++....|+.-+               .+..++||+=.++.|++++..+++++++++.-.    ..+..|.
T Consensus       203 ~~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vS  282 (670)
T PF10395_consen  203 NSKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQLSKKTISSYSIPNFQIQKTISLPSIIDKESDDLVS  282 (670)
T ss_pred             CCcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEEeCCEEEEEEcCCceEEEEEEechhhccccccceE
Confidence                11233442222333332               223578888788899999999999999998651    1123444


Q ss_pred             EEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020        109 QMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus       109 ~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      -...+.+.|+++  .++.|+|.|..=...+.+++..++
T Consensus       283 l~~~s~nRvLLs--~~nkIyLld~~~~siLse~~~s~~  318 (670)
T PF10395_consen  283 LKPPSPNRVLLS--VNNKIYLLDLKFESILSEFELSHP  318 (670)
T ss_pred             eecCCCCeEEEE--cCCEEEEEeehhhhhhhhhhccCC
Confidence            445557777655  567899999886666777664443

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=90.56  E-value=7.9  Score=31.21  Aligned_cols=100  Identities=13%  Similarity=0.074  Sum_probs=50.1

Q ss_pred             eEEeCCeEEEEecCC--cEEEEEcC-CCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------------CeEE
Q psy16020         21 PVHVQGRVVCALADG--SVAIFRRG-PDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------------NKIH   84 (151)
Q Consensus        21 i~~~~~~v~vgl~nG--~l~v~~~~-~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------------n~I~   84 (151)
                      -...+++||+..+..  .+.+|+.. ....|..-.    ++......-.+++.++++||+-.|             +.++
T Consensus        13 ~~~~~~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~----~~p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~   88 (346)
T TIGR03547        13 GAIIGDKVYVGLGSAGTSWYKLDLKKPSKGWQKIA----DFPGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVY   88 (346)
T ss_pred             EEEECCEEEEEccccCCeeEEEECCCCCCCceECC----CCCCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEE
Confidence            334588999965432  35555542 234563211    111000112356667899987654             2488


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD  124 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d  124 (151)
                      .+|+.+.+=.+.-...+........+...+..+++.++.+
T Consensus        89 ~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~  128 (346)
T TIGR03547        89 RYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN  128 (346)
T ss_pred             EEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence            8998876533321112211111222224577888877653

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=90.47  E-value=0.45  Score=41.17  Aligned_cols=31  Identities=29%  Similarity=0.420  Sum_probs=28.5

Q ss_pred             CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020        114 GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       114 ~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +....++..+|..||+||..|+++++.+|+-
T Consensus       229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~~  259 (547)
T PF11715_consen  229 DDTFLFTLSRDHTLRIWSLETGQCLATIDLL  259 (547)
T ss_dssp             TTTEEEEEETTSEEEEEETTTTCEEEEEETT
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEeccc
Confidence            6777889999999999999999999999875

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PRK01742 tolB translocation protein TolB; Provisional

Probab=90.31  E-value=9.2  Score=32.04  Aligned_cols=69  Identities=19%  Similarity=0.146  Sum_probs=40.7

Q ss_pred             CceEEEeee--CCEEE-EEeC---CeEEEEeCCCCcEE--EEEEecCCCCCceeEEEEeCCEE--EEEEcCCCe--EEEE
Q psy16020         63 HSVRSLAAV--YNKVW-CGYK---NKIHVVDPKSLVVL--KSFDAHPRRESQVRQMTWAGDGV--WVSIRLDST--LRMY  130 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw-~g~~---n~I~vid~~t~~i~--~~~~~h~~~~~~I~~m~~~~~~v--wis~~~d~~--l~lw  130 (151)
                      .++......  +++|. ++.+   ..|+++|.++++..  ..+.+|      .....++++|-  .++.++++.  |.+|
T Consensus       204 ~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~------~~~~~wSPDG~~La~~~~~~g~~~Iy~~  277 (429)
T PRK01742        204 QPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH------NGAPAFSPDGSRLAFASSKDGVLNIYVM  277 (429)
T ss_pred             CccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc------cCceeECCCCCEEEEEEecCCcEEEEEE
Confidence            778877776  35554 4443   36999999988643  223333      23466776654  334445665  4555


Q ss_pred             eCCccce
Q psy16020        131 NAHTYQH  137 (151)
Q Consensus       131 d~~t~~~  137 (151)
                      |..+.+.
T Consensus       278 d~~~~~~  284 (429)
T PRK01742        278 GANGGTP  284 (429)
T ss_pred             ECCCCCe
Confidence            7665543

>KOG0644|consensus

Probab=90.30  E-value=0.15  Score=46.37  Aligned_cols=75  Identities=9%  Similarity=0.110  Sum_probs=61.8

Q ss_pred             CceEEEeee--CCEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcccee
Q psy16020         63 HSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l  138 (151)
                      ..|.|.++-  +-.+..|+++ .++||..+|..+..+.-+|+-   -|+.|+++.+.. -.+.++|-+||+|-..++.++
T Consensus       191 naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~---ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv  267 (1113)
T KOG0644|consen  191 NAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSG---DITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV  267 (1113)
T ss_pred             hheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCcc---ccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence            557776663  4568888876 699999999999999999974   899999986666 678999999999999988776


Q ss_pred             ee
Q psy16020        139 QD  140 (151)
Q Consensus       139 ~~  140 (151)
                      .-
T Consensus       268 sv  269 (1113)
T KOG0644|consen  268 SV  269 (1113)
T ss_pred             HH
Confidence            53

>smart00564 PQQ beta-propeller repeat

Probab=90.29  E-value=1.1  Score=23.16  Aligned_cols=26  Identities=19%  Similarity=0.265  Sum_probs=20.8

Q ss_pred             eCCEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16020         71 VYNKVWCGYK-NKIHVVDPKSLVVLKS   96 (151)
Q Consensus        71 v~~~Lw~g~~-n~I~vid~~t~~i~~~   96 (151)
                      .++.++++.. +.++.+|++++++.=+
T Consensus         5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        5 SDGTVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             ECCEEEEEcCCCEEEEEEcccCcEEEE
Confidence            3568898885 6999999999987644

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>KOG1009|consensus

Probab=90.28  E-value=2.4  Score=35.72  Aligned_cols=123  Identities=16%  Similarity=0.161  Sum_probs=74.6

Q ss_pred             CceeeeEEeCC-eEEEE-ecCCcEEEEEcCCCCCCCCCc--------ce-EEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020         16 DTALPPVHVQG-RVVCA-LADGSVAIFRRGPDGQWDLSK--------YH-TVTLGLPHHSVRSLAAVY--NKVWCGY-KN   81 (151)
Q Consensus        16 ~~V~~i~~~~~-~v~vg-l~nG~l~v~~~~~~~~wd~~~--------~~-~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n   81 (151)
                      .+|.++.+.++ .+.++ ..+|.+.+|...+-..-+.+.        .. ...++.+..-|.-++-..  +.+-.|+ +|
T Consensus        66 ~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn  145 (434)
T KOG1009|consen   66 RAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN  145 (434)
T ss_pred             ceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc
Confidence            47888888654 45554 445688888665211101111        11 123443334444444433  3466666 47


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .++.||...|++++.+..|..   .|+-.++++.+- ..+.+.|...+.+.+...+.++-+
T Consensus       146 s~~l~Dv~~G~l~~~~~dh~~---yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~  203 (434)
T KOG1009|consen  146 SVRLWDVHAGQLLAILDDHEH---YVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRH  203 (434)
T ss_pred             eEEEEEeccceeEeecccccc---ccceeecchhhhhhhhhccCcccceeeeeeeeeeeee
Confidence            899999999999999999964   777777775544 345666666777776665555544

>KOG2395|consensus

Probab=89.73  E-value=5.3  Score=35.09  Aligned_cols=100  Identities=17%  Similarity=0.223  Sum_probs=71.6

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCC----CCCCcceEEEeCCCCCceEEEeeeC-CEEEEEe-CCeEEEEeCCCCcEEEE-E
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY-KNKIHVVDPKSLVVLKS-F   97 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~----wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~-~n~I~vid~~t~~i~~~-~   97 (151)
                      ..+-|+||+|..|+-++....|.    |+-..    +... +..-.|.+..+ +.+.+|+ ++.|..+|. .+.--++ |
T Consensus       394 ~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~k----qy~~-k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAl  467 (644)
T KOG2395|consen  394 SEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSK----QYST-KNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTAL  467 (644)
T ss_pred             ccccEEeecCCceEEecccccCcceeeeeecc----cccc-ccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcc
Confidence            34689999999988887654443    32111    1111 25566777764 7899888 689999998 5554343 4


Q ss_pred             EecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         98 DAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      .+-   ...|.++..+-+|-||-+--++.|.|-|+.
T Consensus       468 PgL---G~~I~hVdvtadGKwil~Tc~tyLlLi~t~  500 (644)
T KOG2395|consen  468 PGL---GDAIKHVDVTADGKWILATCKTYLLLIDTL  500 (644)
T ss_pred             ccc---CCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence            444   458999999999999999999999999886

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=89.66  E-value=1.3  Score=38.37  Aligned_cols=76  Identities=14%  Similarity=0.239  Sum_probs=44.2

Q ss_pred             eCCeEEEEecCCcEEEEEcCC----CCCCCCCcceEE----------EeC-----CCCCceEEEee-----e-CCEEEEE
Q psy16020         24 VQGRVVCALADGSVAIFRRGP----DGQWDLSKYHTV----------TLG-----LPHHSVRSLAA-----V-YNKVWCG   78 (151)
Q Consensus        24 ~~~~v~vgl~nG~l~v~~~~~----~~~wd~~~~~~i----------~l~-----~~~~pV~~m~~-----v-~~~Lw~g   78 (151)
                      .++.+++++.||.|..+.+..    ++.|.......-          ...     ..........+     . .+.|++-
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl  236 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL  236 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence            577899999999999999985    334533221100          000     00122222222     1 3678888


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEe
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDA   99 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~   99 (151)
                      |. +++++||++|+++.+++..
T Consensus       237 ~~D~~LRiW~l~t~~~~~~~~~  258 (547)
T PF11715_consen  237 SRDHTLRIWSLETGQCLATIDL  258 (547)
T ss_dssp             ETTSEEEEEETTTTCEEEEEET
T ss_pred             eCCCeEEEEECCCCeEEEEecc
Confidence            96 5899999999999777643

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=89.51  E-value=3  Score=33.19  Aligned_cols=64  Identities=14%  Similarity=0.162  Sum_probs=44.4

Q ss_pred             CCceeeeEEeC---------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee------eCCEEEEEe
Q psy16020         15 LDTALPPVHVQ---------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA------VYNKVWCGY   79 (151)
Q Consensus        15 ~~~V~~i~~~~---------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~------v~~~Lw~g~   79 (151)
                      ++.|+||....         ..+.+|+.+|.|.|.+-.     .+.....+++..  -|+ +|..      ++-++.++|
T Consensus       176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~-----af~il~~~~lps--vPv-~i~~~G~~devdyRI~Va~  247 (257)
T PF14779_consen  176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQ-----AFTILKQVQLPS--VPV-FISVSGQYDEVDYRIVVAC  247 (257)
T ss_pred             CceeEEeeeecccccCCCCcceEEEEecCCeEEEECch-----hheeEEEEecCC--Cce-EEEEEeeeeccceEEEEEe
Confidence            36788886642         269999999999999864     234445667765  555 2222      456899999


Q ss_pred             C-CeEEEE
Q psy16020         80 K-NKIHVV   86 (151)
Q Consensus        80 ~-n~I~vi   86 (151)
                      + ++||.+
T Consensus       248 Rdg~iy~i  255 (257)
T PF14779_consen  248 RDGKIYTI  255 (257)
T ss_pred             CCCEEEEE
Confidence            6 589987

>KOG1523|consensus

Probab=89.37  E-value=3.8  Score=33.71  Aligned_cols=123  Identities=15%  Similarity=0.157  Sum_probs=82.2

Q ss_pred             CCceeeeeeCCC-ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee--eCCEEEEEe
Q psy16020          5 HPTPYPLNKILD-TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA--VYNKVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~l~~-~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~--v~~~Lw~g~   79 (151)
                      +++..+.++-+| .|+.|...  .|++..+..|-.-.||+..++|.|.- .+..+.+.   .-.+|+.-  .+|+..+|+
T Consensus        44 ~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkp-tlvLlRiN---rAAt~V~WsP~enkFAVgS  119 (361)
T KOG1523|consen   44 LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKP-TLVLLRIN---RAATCVKWSPKENKFAVGS  119 (361)
T ss_pred             CceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecc-ceeEEEec---cceeeEeecCcCceEEecc
Confidence            377888888775 77777664  46899999999999999888999953 22334443   55666655  468899999


Q ss_pred             CCeEEEEeCCCCcEEEEEE--ec--CCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020         80 KNKIHVVDPKSLVVLKSFD--AH--PRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus        80 ~n~I~vid~~t~~i~~~~~--~h--~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~  133 (151)
                      |.++.-+.-  ++-|..+=  -|  ..-.+.|+++..-+++| +.+++.|...|+|-+-
T Consensus       120 gar~isVcy--~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSay  176 (361)
T KOG1523|consen  120 GARLISVCY--YEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAY  176 (361)
T ss_pred             CccEEEEEE--EecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEe
Confidence            876443322  22222220  01  11135799999999998 5566678888888664

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=89.30  E-value=11  Score=31.01  Aligned_cols=100  Identities=11%  Similarity=0.015  Sum_probs=50.5

Q ss_pred             eeEEeCCeEEEEecC--CcEEEEEcCC-CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------------CeE
Q psy16020         20 PPVHVQGRVVCALAD--GSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------------NKI   83 (151)
Q Consensus        20 ~i~~~~~~v~vgl~n--G~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------------n~I   83 (151)
                      +....++.||++++.  ..+.+|+... .+.|..-.    ++..+...-.+++..+++||+-.|             +.+
T Consensus        33 ~~~~~~~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~----~~p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v  108 (376)
T PRK14131         33 TGAIDNNTVYVGLGSAGTSWYKLDLNAPSKGWTKIA----AFPGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDV  108 (376)
T ss_pred             eEEEECCEEEEEeCCCCCeEEEEECCCCCCCeEECC----cCCCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccE
Confidence            344468899995543  3456666542 34563111    111101112245567889887543             348


Q ss_pred             EEEeCCCCcEEEEEEecCCCCCceeEEEE-eCCEEEEEEcCC
Q psy16020         84 HVVDPKSLVVLKSFDAHPRRESQVRQMTW-AGDGVWVSIRLD  124 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~-~~~~vwis~~~d  124 (151)
                      +.||+.+.+-.+. .........=+.++. .++.+++.++.+
T Consensus       109 ~~YD~~~n~W~~~-~~~~p~~~~~~~~~~~~~~~IYv~GG~~  149 (376)
T PRK14131        109 YKYDPKTNSWQKL-DTRSPVGLAGHVAVSLHNGKAYITGGVN  149 (376)
T ss_pred             EEEeCCCCEEEeC-CCCCCCcccceEEEEeeCCEEEEECCCC
Confidence            8999887653332 111111111123333 577888887753

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=89.20  E-value=14  Score=32.18  Aligned_cols=107  Identities=21%  Similarity=0.300  Sum_probs=68.3

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEEEeCCCCcEEEEEEecC
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPKSLVVLKSFDAHP  101 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~  101 (151)
                      +..++--+-|+..+++     .|+   ...++++.+ .-||.--+-  ++.+..|.  |+.+-|+|.++++.++--+.- 
T Consensus       332 Gd~ia~VSRGkaFi~~-----~~~---~~~iqv~~~-~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~l-  401 (668)
T COG4946         332 GDYIALVSRGKAFIMR-----PWD---GYSIQVGKK-GGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDL-  401 (668)
T ss_pred             CcEEEEEecCcEEEEC-----CCC---CeeEEcCCC-CceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCc-
Confidence            3444445556666664     242   357888864 558877664  34577776  469999999999987655533 


Q ss_pred             CCCCceeEEEEeCCEEEEEEcCC-----------CeEEEEeCCccceeeeEeCCc
Q psy16020        102 RRESQVRQMTWAGDGVWVSIRLD-----------STLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       102 ~~~~~I~~m~~~~~~vwis~~~d-----------~~l~lwd~~t~~~l~~idi~~  145 (151)
                         ..|.+|.++.+|-.+..+++           +.+++-|-..+-++-++++.|
T Consensus       402 ---g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~  453 (668)
T COG4946         402 ---GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHP  453 (668)
T ss_pred             ---cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcC
Confidence               47999999988765444443           334444444455666666555

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=88.96  E-value=4.9  Score=31.95  Aligned_cols=64  Identities=17%  Similarity=0.266  Sum_probs=43.9

Q ss_pred             CCceEEEeeeC---------CEEEEEeCC-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-----EEEEEEcCCCe
Q psy16020         62 HHSVRSLAAVY---------NKVWCGYKN-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDST  126 (151)
Q Consensus        62 ~~pV~~m~~v~---------~~Lw~g~~n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d~~  126 (151)
                      +..|+||....         +.|.+|..+ .|||+|++.+++.+++..-+-   ++ .|...|.     .-.+-..||+.
T Consensus       176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsv---Pv-~i~~~G~~devdyRI~Va~Rdg~  251 (257)
T PF14779_consen  176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSV---PV-FISVSGQYDEVDYRIVVACRDGK  251 (257)
T ss_pred             CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCC---ce-EEEEEeeeeccceEEEEEeCCCE
Confidence            36889999851         579999974 899999999999999886642   33 4444442     22344445555


Q ss_pred             EEE
Q psy16020        127 LRM  129 (151)
Q Consensus       127 l~l  129 (151)
                      |++
T Consensus       252 iy~  254 (257)
T PF14779_consen  252 IYT  254 (257)
T ss_pred             EEE
Confidence            543

>KOG4640|consensus

Probab=88.83  E-value=4.2  Score=36.17  Aligned_cols=97  Identities=19%  Similarity=0.179  Sum_probs=66.6

Q ss_pred             ceeeeeeCCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceE-EEeee--CCEEEEEeC-
Q psy16020          7 TPYPLNKILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR-SLAAV--YNKVWCGYK-   80 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~-~m~~v--~~~Lw~g~~-   80 (151)
                      +.....++|.-+-.+.+++.+  +-.+..+|.|++++.+-..-|        .+..|..+++ |+.--  ++-|.+|.. 
T Consensus        12 ~~~~~~~l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlw--------tip~p~~~v~~sL~W~~DGkllaVg~kd   83 (665)
T KOG4640|consen   12 ETNGVMSLPINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLW--------TIPIPGENVTASLCWRPDGKLLAVGFKD   83 (665)
T ss_pred             hhhhhhccccceEEEEEcCccchhheeccCCcEEEEEeccceeE--------eccCCCCccceeeeecCCCCEEEEEecC
Confidence            344556778888888998876  555677899999987633333        3333448887 76664  355889996 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA  113 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~  113 (151)
                      ++|.+.|.+++.....+....  +..|.++.++
T Consensus        84 G~I~L~Dve~~~~l~~~~~s~--e~~is~~~w~  114 (665)
T KOG4640|consen   84 GTIRLHDVEKGGRLVSFLFSV--ETDISKGIWD  114 (665)
T ss_pred             CeEEEEEccCCCceecccccc--ccchheeecc
Confidence            599999999999888843221  2356666554

>PRK03629 tolB translocation protein TolB; Provisional

Probab=88.80  E-value=13  Score=31.22  Aligned_cols=101  Identities=14%  Similarity=0.060  Sum_probs=57.3

Q ss_pred             eEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe---C-CeEEEEeCCCCcEEE
Q psy16020         27 RVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY---K-NKIHVVDPKSLVVLK   95 (151)
Q Consensus        27 ~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~---~-n~I~vid~~t~~i~~   95 (151)
                      -+|+.-..+     .|.+++.+  |    .+++.+.-+.  .++.+.....  ++|...+   + ..|+++|..+++..+
T Consensus       166 iayv~~~~~~~~~~~l~~~d~d--g----~~~~~lt~~~--~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~  237 (429)
T PRK03629        166 IAYVVQTNGGQFPYELRVSDYD--G----YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ  237 (429)
T ss_pred             EEEEEeeCCCCcceeEEEEcCC--C----CCCEEeecCC--CceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE
Confidence            356665433     46665542  2    2344444443  6787777763  4554432   2 479999999987544


Q ss_pred             EEEecCCCCCceeEEEEeCCEEEEE--EcCC--CeEEEEeCCccceee
Q psy16020         96 SFDAHPRRESQVRQMTWAGDGVWVS--IRLD--STLRMYNAHTYQHLQ  139 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~vwis--~~~d--~~l~lwd~~t~~~l~  139 (151)
                      -.. ...   .+....++++|-.+.  .+.+  ..|.+||..+.+..+
T Consensus       238 l~~-~~~---~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~  281 (429)
T PRK03629        238 VAS-FPR---HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ  281 (429)
T ss_pred             ccC-CCC---CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE
Confidence            322 111   233466776664333  3333  469999998866543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=88.74  E-value=4.4  Score=35.53  Aligned_cols=72  Identities=10%  Similarity=0.061  Sum_probs=46.4

Q ss_pred             eeeeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCE-EEEEeC-CeE
Q psy16020          9 YPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGYK-NKI   83 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~-Lw~g~~-n~I   83 (151)
                      +.+|.|++.|.|-...  +.++.+|..||+|.+|+...+      .....+..   -..+.++-+ ++. +-+|++ |.+
T Consensus       253 vtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~------~t~~~ka~---~~P~~iaWHp~gai~~V~s~qGel  323 (545)
T PF11768_consen  253 VTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG------VTLLAKAE---FIPTLIAWHPDGAIFVVGSEQGEL  323 (545)
T ss_pred             EEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCC------eeeeeeec---ccceEEEEcCCCcEEEEEcCCceE
Confidence            4567788888887764  557999999999999997532      11222222   222344444 344 445554 789


Q ss_pred             EEEeCC
Q psy16020         84 HVVDPK   89 (151)
Q Consensus        84 ~vid~~   89 (151)
                      .+||..
T Consensus       324 Q~FD~A  329 (545)
T PF11768_consen  324 QCFDMA  329 (545)
T ss_pred             EEEEee
Confidence            999965

>PRK04922 tolB translocation protein TolB; Provisional

Probab=88.74  E-value=12  Score=31.26  Aligned_cols=82  Identities=13%  Similarity=0.019  Sum_probs=48.6

Q ss_pred             cceEEEeCCCCCceEEEeee--CCEEEEEe---C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC
Q psy16020         52 KYHTVTLGLPHHSVRSLAAV--YNKVWCGY---K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL  123 (151)
Q Consensus        52 ~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~---~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~  123 (151)
                      .++.+.-+.  .++.+....  +++|+..+   + ..|+++|..+++..+ +....   .......++++|  +.++.+.
T Consensus       195 ~~~~lt~~~--~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~---g~~~~~~~SpDG~~l~~~~s~  268 (433)
T PRK04922        195 NPQTILRSA--EPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFR---GINGAPSFSPDGRRLALTLSR  268 (433)
T ss_pred             CceEeecCC--CccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCC---CCccCceECCCCCEEEEEEeC
Confidence            344444333  677776665  35666554   2 369999999887643 22222   233456677555  4444444


Q ss_pred             C--CeEEEEeCCccceee
Q psy16020        124 D--STLRMYNAHTYQHLQ  139 (151)
Q Consensus       124 d--~~l~lwd~~t~~~l~  139 (151)
                      +  ..|++||..+.+..+
T Consensus       269 ~g~~~Iy~~d~~~g~~~~  286 (433)
T PRK04922        269 DGNPEIYVMDLGSRQLTR  286 (433)
T ss_pred             CCCceEEEEECCCCCeEE
Confidence            3  479999998876443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=88.54  E-value=12  Score=30.42  Aligned_cols=94  Identities=9%  Similarity=0.154  Sum_probs=59.4

Q ss_pred             CeEEEEecC-CcEEEEEcC-CCCCCCCCcce-EEEeC-CCCCceEEEeeeCCEEEE-EeCC--eEEEEeCCCCcEEEEEE
Q psy16020         26 GRVVCALAD-GSVAIFRRG-PDGQWDLSKYH-TVTLG-LPHHSVRSLAAVYNKVWC-GYKN--KIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        26 ~~v~vgl~n-G~l~v~~~~-~~~~wd~~~~~-~i~l~-~~~~pV~~m~~v~~~Lw~-g~~n--~I~vid~~t~~i~~~~~   98 (151)
                      +.+|++-+- +.|..|+.. .++.  ..... .+... .+..|=-.-.=.++.||+ +.++  +|.+|+++ ++....++
T Consensus       175 ~tly~aDT~~~~i~r~~~d~~~g~--~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~  251 (307)
T COG3386         175 KTLYVADTPANRIHRYDLDPATGP--IGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIK  251 (307)
T ss_pred             CEEEEEeCCCCeEEEEecCcccCc--cCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEE
Confidence            368887764 678888775 2232  12221 12221 122444333335789994 4443  99999999 99888888


Q ss_pred             ecCCCCCceeEEEEeC---CEEEEEEcCCC
Q psy16020         99 AHPRRESQVRQMTWAG---DGVWVSIRLDS  125 (151)
Q Consensus        99 ~h~~~~~~I~~m~~~~---~~vwis~~~d~  125 (151)
                      ...   ..+++.++.|   +.++++..+.+
T Consensus       252 lP~---~~~t~~~FgG~~~~~L~iTs~~~~  278 (307)
T COG3386         252 LPV---KRPTNPAFGGPDLNTLYITSARSG  278 (307)
T ss_pred             CCC---CCCccceEeCCCcCEEEEEecCCC
Confidence            663   3788888887   67788877763

>smart00564 PQQ beta-propeller repeat

Probab=88.39  E-value=1.1  Score=23.20  Aligned_cols=23  Identities=22%  Similarity=0.303  Sum_probs=18.9

Q ss_pred             EEeCCeEEEEecCCcEEEEEcCC
Q psy16020         22 VHVQGRVVCALADGSVAIFRRGP   44 (151)
Q Consensus        22 ~~~~~~v~vgl~nG~l~v~~~~~   44 (151)
                      ...++.+|++..+|.|.+++...
T Consensus         3 ~~~~~~v~~~~~~g~l~a~d~~~   25 (33)
T smart00564        3 VLSDGTVYVGSTDGTLYALDAKT   25 (33)
T ss_pred             EEECCEEEEEcCCCEEEEEEccc
Confidence            34566899999999999999753

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=88.37  E-value=4.4  Score=32.44  Aligned_cols=61  Identities=13%  Similarity=0.140  Sum_probs=46.8

Q ss_pred             CCeEEEEeCCCCcEEEEEEecCC---CCCceeEEEEeC-------CEEEEEEcCCCeEEEEeCCccceeee
Q psy16020         80 KNKIHVVDPKSLVVLKSFDAHPR---RESQVRQMTWAG-------DGVWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        80 ~n~I~vid~~t~~i~~~~~~h~~---~~~~I~~m~~~~-------~~vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      +.+|.+||++|.++.+++.-..+   ..+.++.+++..       .-++|+-...+-|-+||..+.+--.-
T Consensus        33 ~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv  103 (287)
T PF03022_consen   33 PPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRV  103 (287)
T ss_dssp             --EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEE
T ss_pred             CcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEE
Confidence            35999999999999999885432   356899999985       24699999999999999998665443

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=88.19  E-value=4.7  Score=31.06  Aligned_cols=76  Identities=13%  Similarity=0.109  Sum_probs=50.9

Q ss_pred             EEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEeCCCCcEEEEE-Ee----cC------CCCCceeEEEEeCCEE-EEEE
Q psy16020         55 TVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVDPKSLVVLKSF-DA----HP------RRESQVRQMTWAGDGV-WVSI  121 (151)
Q Consensus        55 ~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid~~t~~i~~~~-~~----h~------~~~~~I~~m~~~~~~v-wis~  121 (151)
                      .+.+|   +|+-.|...++.|-|-+ .+.+||||.++++..-.- ..    ..      .....|.......+|+ .++.
T Consensus         8 ~i~Lg---s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l   84 (219)
T PF07569_consen    8 PIVLG---SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL   84 (219)
T ss_pred             cEecC---CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE
Confidence            35565   56666777777755554 689999999998854332 10    00      2334677777877787 7777


Q ss_pred             cCCCeEEEEeCCc
Q psy16020        122 RLDSTLRMYNAHT  134 (151)
Q Consensus       122 ~~d~~l~lwd~~t  134 (151)
                      ++ +..+.||..-
T Consensus        85 sn-g~~y~y~~~L   96 (219)
T PF07569_consen   85 SN-GDSYSYSPDL   96 (219)
T ss_pred             eC-CCEEEecccc
Confidence            76 5678888773

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=87.93  E-value=3.1  Score=35.64  Aligned_cols=86  Identities=9%  Similarity=0.144  Sum_probs=51.4

Q ss_pred             CCCCceeeeeeCC---CceeeeEEeC----CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCC-----C-c----
Q psy16020          3 YPHPTPYPLNKIL---DTALPPVHVQ----GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPH-----H-S----   64 (151)
Q Consensus         3 ~~~~~~l~~i~l~---~~V~~i~~~~----~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~-----~-p----   64 (151)
                      .+.++.++.|.|+   ..++.|.+.-    ++-|||.+ .++|-.|-+..+|.|..+  +.+++...+     . +    
T Consensus       229 ~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~--kVi~ip~~~v~~~~lp~ml~~  306 (461)
T PF05694_consen  229 WSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAE--KVIDIPAKKVEGWILPEMLKP  306 (461)
T ss_dssp             TTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEE--EEEEE--EE--SS---GGGGG
T ss_pred             CCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeee--EEEECCCcccCcccccccccc
Confidence            3567889999999   3788888743    35555554 346777767678999654  566665410     1 1    


Q ss_pred             -------eEEEeee-CC-EEEEEeC--CeEEEEeCCC
Q psy16020         65 -------VRSLAAV-YN-KVWCGYK--NKIHVVDPKS   90 (151)
Q Consensus        65 -------V~~m~~v-~~-~Lw~g~~--n~I~vid~~t   90 (151)
                             |+-|.+. ++ .||++|.  +.|.-+|...
T Consensus       307 ~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD  343 (461)
T PF05694_consen  307 FGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD  343 (461)
T ss_dssp             G-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred             cccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence                   3555554 44 4999996  6899999764

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PRK05137 tolB translocation protein TolB; Provisional

Probab=87.91  E-value=15  Score=30.78  Aligned_cols=70  Identities=16%  Similarity=0.083  Sum_probs=40.5

Q ss_pred             CceEEEeee--CCEEEEEe---C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE--EEcC--CCeEEEEeC
Q psy16020         63 HSVRSLAAV--YNKVWCGY---K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV--SIRL--DSTLRMYNA  132 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~---~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi--s~~~--d~~l~lwd~  132 (151)
                      .++.+....  +++|....   + ..||++|+++++.. ++..+.   .......++++|-++  +..+  +..|.++|.
T Consensus       246 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~---~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~  321 (435)
T PRK05137        246 GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSP---AIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA  321 (435)
T ss_pred             CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE-EccCCC---CccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence            445444454  45665443   2 36999999998764 354343   234456667655333  3223  347888898


Q ss_pred             Cccc
Q psy16020        133 HTYQ  136 (151)
Q Consensus       133 ~t~~  136 (151)
                      .+.+
T Consensus       322 ~g~~  325 (435)
T PRK05137        322 DGSN  325 (435)
T ss_pred             CCCC
Confidence            7654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=87.68  E-value=16  Score=30.77  Aligned_cols=71  Identities=8%  Similarity=-0.043  Sum_probs=40.5

Q ss_pred             CceEEEeee--CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEE--EEcCC--CeEEEEeC
Q psy16020         63 HSVRSLAAV--YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWV--SIRLD--STLRMYNA  132 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwi--s~~~d--~~l~lwd~  132 (151)
                      ..+......  +++|...+.    .+||++|+++++..+ +..+.   .......++++|-++  +..++  ..|.+||.
T Consensus       287 ~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~-lt~~~---~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl  362 (429)
T PRK03629        287 SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQR-ITWEG---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL  362 (429)
T ss_pred             CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEE-eecCC---CCccCEEECCCCCEEEEEEccCCCceEEEEEC
Confidence            344444444  356766653    279999999887643 33222   234455666655433  33332  46889998


Q ss_pred             Cccce
Q psy16020        133 HTYQH  137 (151)
Q Consensus       133 ~t~~~  137 (151)
                      .+.+.
T Consensus       363 ~~g~~  367 (429)
T PRK03629        363 ATGGV  367 (429)
T ss_pred             CCCCe
Confidence            87653

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=87.29  E-value=16  Score=30.35  Aligned_cols=103  Identities=16%  Similarity=0.213  Sum_probs=69.7

Q ss_pred             CCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeC----CeEEEEeCCCCcEEEEEE
Q psy16020         25 QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYK----NKIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        25 ~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~----n~I~vid~~t~~i~~~~~   98 (151)
                      .+++|+...+ +.+.+++...     ....+.+.+|.  .|..--.- .++.+|++-.    ++|.++|..|.++.++..
T Consensus        85 ~~~vyv~~~~~~~v~vid~~~-----~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~  157 (381)
T COG3391          85 GNKVYVTTGDSNTVSVIDTAT-----NTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP  157 (381)
T ss_pred             CCeEEEecCCCCeEEEEcCcc-----cceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe
Confidence            4568888866 7788887321     12334556665  44322222 2468998874    589999999999888855


Q ss_pred             ecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         99 AHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        99 ~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      .-..   + ..++..  |..+|++-..++.|.+.|..+-+..
T Consensus       158 vG~~---P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         158 VGNT---P-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             cCCC---c-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence            4432   3 556666  5557888889999999998876555

>KOG1912|consensus

Probab=86.98  E-value=1.5  Score=40.00  Aligned_cols=70  Identities=20%  Similarity=0.286  Sum_probs=55.6

Q ss_pred             CEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-----CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         73 NKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-----GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        73 ~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-----~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .++-.+++   ++|.++|-........|+-|.+   +|..|.+.     ...++++...+++|-||++.|++.+.+.|-+
T Consensus        78 ~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~---~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys  154 (1062)
T KOG1912|consen   78 SQLLIASADISGRIILVDFVLASVINWLSHSND---SVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYS  154 (1062)
T ss_pred             cceeEEeccccCcEEEEEehhhhhhhhhcCCCc---chhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccC
Confidence            34555553   6899999999999999996665   77887776     2267899999999999999999988776654


Q ss_pred             c
Q psy16020        145 P  145 (151)
Q Consensus       145 ~  145 (151)
                      +
T Consensus       155 ~  155 (1062)
T KOG1912|consen  155 H  155 (1062)
T ss_pred             C
Confidence            4

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=86.95  E-value=19  Score=30.88  Aligned_cols=68  Identities=9%  Similarity=0.024  Sum_probs=37.7

Q ss_pred             eeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeeeC--CEEEEEeCCeEEEE
Q psy16020         10 PLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY--NKVWCGYKNKIHVV   86 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vi   86 (151)
                      .++++|-++..|..  |.++.-.+++.|+.|++..        .+.+ ++.-  .||+.+.-.+  +.+...+.+.|+++
T Consensus       103 k~i~~~~~~~~If~--G~LL~~~~~~~i~~yDw~~--------~~~i~~i~v--~~vk~V~Ws~~g~~val~t~~~i~il  170 (443)
T PF04053_consen  103 KSIKLPFSVEKIFG--GNLLGVKSSDFICFYDWET--------GKLIRRIDV--SAVKYVIWSDDGELVALVTKDSIYIL  170 (443)
T ss_dssp             -----SS-EEEEE---SSSEEEEETTEEEEE-TTT----------EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEE
T ss_pred             eEEcCCcccceEEc--CcEEEEECCCCEEEEEhhH--------cceeeEEec--CCCcEEEEECCCCEEEEEeCCeEEEE
Confidence            46777777888877  6776666788999998752        2233 3333  5688888874  57888888888888


Q ss_pred             eCC
Q psy16020         87 DPK   89 (151)
Q Consensus        87 d~~   89 (151)
                      +-+
T Consensus       171 ~~~  173 (443)
T PF04053_consen  171 KYN  173 (443)
T ss_dssp             EE-
T ss_pred             Eec
Confidence            643

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=86.44  E-value=14  Score=28.95  Aligned_cols=136  Identities=10%  Similarity=0.142  Sum_probs=80.6

Q ss_pred             CCCCceeeeeeCC-Cceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020          3 YPHPTPYPLNKIL-DTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG   78 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g   78 (151)
                      ..+.+.+++-+|+ +.+|-  |.-.++++|.=.= +|.-.+|+.+     +++....+...   .-=-.+..-++.||-+
T Consensus        75 L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~-----t~~~lg~~~y~---GeGWgLt~d~~~Lims  146 (262)
T COG3823          75 LTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDAD-----TLEELGRFSYE---GEGWGLTSDDKNLIMS  146 (262)
T ss_pred             ccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChH-----HhhhhcccccC---CcceeeecCCcceEee
Confidence            3455777777777 44442  3334445554332 2333333322     11111111111   1112233335679999


Q ss_pred             eCC-eEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         79 YKN-KIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        79 ~~n-~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      .|+ .++--|++|+...++.++.-+  +-+.++-+++...-++.-.=.+..|-.-|..+++.+.-||+++-
T Consensus       147 dGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L  217 (262)
T COG3823         147 DGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWIDLSGL  217 (262)
T ss_pred             CCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEEccCC
Confidence            997 799999999998888775422  13356777777665555555566788889999999999998864

>KOG1645|consensus

Probab=86.29  E-value=4.2  Score=34.46  Aligned_cols=68  Identities=22%  Similarity=0.258  Sum_probs=53.2

Q ss_pred             CceEEEeeeC-CE--EEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020         63 HSVRSLAAVY-NK--VWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        63 ~pV~~m~~v~-~~--Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t  134 (151)
                      .-||.|++.. ++  +-.++ ||+|.|+|.+|-.+..++.+|.    ++-...++  ...+..++...+.|.+||.+.
T Consensus       194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~----~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~  267 (463)
T KOG1645|consen  194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYN----QIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ  267 (463)
T ss_pred             hhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccC----CceeeeeccCCcceeEEeccCceEEEEEccC
Confidence            6788888864 33  44444 8999999999999999999994    55554444  556677999999999999995

>KOG2066|consensus

Probab=86.25  E-value=16  Score=33.50  Aligned_cols=88  Identities=14%  Similarity=0.058  Sum_probs=63.5

Q ss_pred             CceeeeeeCCCceeeeEEeCC-------eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020          6 PTPYPLNKILDTALPPVHVQG-------RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG   78 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~-------~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g   78 (151)
                      .+-.+++...-++.+|..+++       +.++|+--| |..|+++=-|.|+     .+.+..-..||+|+.-.++-+.-+
T Consensus       103 ~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~-----~v~l~~~eG~I~~i~W~g~lIAWa  176 (846)
T KOG2066|consen  103 DDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD-----SVVLSEGEGPIHSIKWRGNLIAWA  176 (846)
T ss_pred             CccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc-----ceeeecCccceEEEEecCcEEEEe
Confidence            334455556667777766654       577777778 9999987555553     223443359999999999987667


Q ss_pred             eCCeEEEEeCCCCcEEEEEEe
Q psy16020         79 YKNKIHVVDPKSLVVLKSFDA   99 (151)
Q Consensus        79 ~~n~I~vid~~t~~i~~~~~~   99 (151)
                      .+--|.|+|+.+.+....++-
T Consensus       177 nd~Gv~vyd~~~~~~l~~i~~  197 (846)
T KOG2066|consen  177 NDDGVKVYDTPTRQRLTNIPP  197 (846)
T ss_pred             cCCCcEEEeccccceeeccCC
Confidence            777899999999998888773

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=85.98  E-value=18  Score=29.77  Aligned_cols=136  Identities=10%  Similarity=0.022  Sum_probs=88.1

Q ss_pred             CCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-CCe
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNK   82 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~   82 (151)
                      ++.-.|-.|.+++.+.++...++++|++=.+.-|.+++..     +.+.|..+..-+-..=-++..+.++..|++- .+-
T Consensus        75 t~~~l~~~i~~~~l~~Dv~vse~yvyvad~ssGL~IvDIS-----~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddg  149 (370)
T COG5276          75 THDVLLSVINARDLFADVRVSEEYVYVADWSSGLRIVDIS-----TPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDG  149 (370)
T ss_pred             cCcceEEEEehhhhhheeEecccEEEEEcCCCceEEEecc-----CCCCcceeccccCCceEEEEEecCCEEEEeeccCc
Confidence            3566778889999999999999999999888889999875     3344443322110011245555578899988 456


Q ss_pred             EEEEeCCC---CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC---ccceeeeEeCCcccc
Q psy16020         83 IHVVDPKS---LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH---TYQHLQDVDIEPYVS  148 (151)
Q Consensus        83 I~vid~~t---~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~---t~~~l~~idi~~~v~  148 (151)
                      ..++|..+   =++..+.+...   .--+.+..+|+.-+++..+.+ |.+-|..   +-.++...|..|.++
T Consensus       150 fLivdvsdpssP~lagrya~~~---~d~~~v~ISGn~AYvA~~d~G-L~ivDVSnp~sPvli~~~n~g~g~~  217 (370)
T COG5276         150 FLIVDVSDPSSPQLAGRYALPG---GDTHDVAISGNYAYVAWRDGG-LTIVDVSNPHSPVLIGSYNTGPGTY  217 (370)
T ss_pred             EEEEECCCCCCceeeeeeccCC---CCceeEEEecCeEEEEEeCCC-eEEEEccCCCCCeEEEEEecCCceE
Confidence            66777553   34555555332   123677788888777765544 5555554   466666677665443

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=85.55  E-value=2.6  Score=37.24  Aligned_cols=97  Identities=16%  Similarity=0.347  Sum_probs=64.1

Q ss_pred             CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CC-CceEEEee-eCCEEEEEeCCeEEEEeCCCC
Q psy16020         16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PH-HSVRSLAA-VYNKVWCGYKNKIHVVDPKSL   91 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~-~pV~~m~~-v~~~Lw~g~~n~I~vid~~t~   91 (151)
                      .+|..|... .|.+|+|.-+| |..|+-        ..-+.+.+.. +. ++|..|.. ..++||+|.+.-|++.++++-
T Consensus       165 ~~V~aLv~D~~g~lWvgT~dG-L~~fd~--------~~gkalql~s~~~dk~I~al~~d~qg~LWVGTdqGv~~~e~~G~  235 (671)
T COG3292         165 TPVVALVFDANGRLWVGTPDG-LSYFDA--------GRGKALQLASPPLDKAINALIADVQGRLWVGTDQGVYLQEAEGW  235 (671)
T ss_pred             ccceeeeeeccCcEEEecCCc-ceEEcc--------ccceEEEcCCCcchhhHHHHHHHhcCcEEEEeccceEEEchhhc
Confidence            478888774 56899999777 455543        2335566654 22 67777776 478999999999999998884


Q ss_pred             cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcC
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRL  123 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~  123 (151)
                      .....+..-+  ...|..+..++.| .|+...+
T Consensus       236 ~~sn~~~~lp--~~~I~ll~qD~qG~lWiGTen  266 (671)
T COG3292         236 RASNWGPMLP--SGNILLLVQDAQGELWIGTEN  266 (671)
T ss_pred             cccccCCCCc--chheeeeecccCCCEEEeecc
Confidence            4433333222  3467777777554 3766554

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=85.53  E-value=3.9  Score=23.51  Aligned_cols=36  Identities=11%  Similarity=0.219  Sum_probs=27.5

Q ss_pred             ceeEEEEeC-CE---EEEEEcCCCeEEEEeCC-ccceeeeE
Q psy16020        106 QVRQMTWAG-DG---VWVSIRLDSTLRMYNAH-TYQHLQDV  141 (151)
Q Consensus       106 ~I~~m~~~~-~~---vwis~~~d~~l~lwd~~-t~~~l~~i  141 (151)
                      .|.+|.+++ .+   +++-....+.+.++|++ ++..-|-|
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~f~~~QVi   42 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSNFMRRQVI   42 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccCccceEee
Confidence            578899983 33   66667778999999999 57766655

It contains a characteristic DLL sequence motif.

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=85.03  E-value=2.7  Score=37.14  Aligned_cols=105  Identities=21%  Similarity=0.374  Sum_probs=68.1

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEE--ecC
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFD--AHP  101 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~--~h~  101 (151)
                      ++.+|+|..+.-|.-|+.+.  .|-   +..-.-+-+.++|+.|..- ++.||+|..+-|.-.+++.++++..+.  .|.
T Consensus       386 ~g~lWlgs~q~GLsrl~n~n--~~a---vlde~agl~ss~V~aived~dnsLWIGTs~Glvk~~pe~~~v~n~ln~~~~~  460 (671)
T COG3292         386 RGRLWLGSMQNGLSRLDNKN--EWA---VLDEDAGLPSSEVSAIVEDPDNSLWIGTSGGLVKRDPESGRVLNLLNPGSHG  460 (671)
T ss_pred             CCcEEEEecccchhhhccCC--ccc---ccccccCCcccceeeeeecCCCCEEEeccCCeEecCccccchhcccccccCc
Confidence            66899999885555555432  231   1111223345888888774 577999999888888999988877754  444


Q ss_pred             CCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020        102 RRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus       102 ~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                      ...+.|..+.+..+|- |++...  -|..|+.+..-
T Consensus       461 l~~s~~~~lg~~~~g~Lw~a~g~--gva~~~sq~~~  494 (671)
T COG3292         461 LDGSRVEQLGLGPDGRLWLAAGS--GVAAWESQRRM  494 (671)
T ss_pred             CCcchhhhhccCCCCceEEEecc--eeeeeccccce
Confidence            4456677777776554 765543  24777776533

>PRK01742 tolB translocation protein TolB; Provisional

Probab=84.45  E-value=20  Score=30.00  Aligned_cols=65  Identities=5%  Similarity=-0.129  Sum_probs=40.5

Q ss_pred             CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC--ccceeeeE
Q psy16020         72 YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH--TYQHLQDV  141 (151)
Q Consensus        72 ~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~--t~~~l~~i  141 (151)
                      ++.|+.++++.|+++|+.+++.+.-...+.     .....++++|- +++.+.++..++|+..  +++..+.+
T Consensus       344 G~~ia~~~~~~i~~~Dl~~g~~~~lt~~~~-----~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l  411 (429)
T PRK01742        344 GKTLVMINGDNVVKQDLTSGSTEVLSSTFL-----DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARL  411 (429)
T ss_pred             CCEEEEEcCCCEEEEECCCCCeEEecCCCC-----CCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEc
Confidence            466887777889999999988654333221     23344666654 4555566766766643  36666655

>KOG0379|consensus

Probab=84.03  E-value=26  Score=30.17  Aligned_cols=110  Identities=15%  Similarity=0.083  Sum_probs=65.2

Q ss_pred             eeEEeCCeEEEEecCC-------cEEEEEcCCCCCCCCCcceEEEeCC-C-CCceEEEeeeCCEEEEE--e------CCe
Q psy16020         20 PPVHVQGRVVCALADG-------SVAIFRRGPDGQWDLSKYHTVTLGL-P-HHSVRSLAAVYNKVWCG--Y------KNK   82 (151)
Q Consensus        20 ~i~~~~~~v~vgl~nG-------~l~v~~~~~~~~wd~~~~~~i~l~~-~-~~pV~~m~~v~~~Lw~g--~------~n~   82 (151)
                      ++...++++|+-.+.-       .|..|+.. .+.|.+-.+    .++ | ..-=.+++.++++||+=  +      -|.
T Consensus       117 ~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~-t~~W~~l~~----~~~~P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~nd  191 (482)
T KOG0379|consen  117 SLSAVGDKLYLFGGTDKKYRNLNELHSLDLS-TRTWSLLSP----TGDPPPPRAGHSATVVGTKLVVFGGIGGTGDSLND  191 (482)
T ss_pred             eEEEECCeEEEEccccCCCCChhheEeccCC-CCcEEEecC----cCCCCCCcccceEEEECCEEEEECCccCcccceee
Confidence            3444455655544443       56666653 355643322    222 1 13335666678887642  2      267


Q ss_pred             EEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCC------CeEEEEeCCc
Q psy16020         83 IHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLD------STLRMYNAHT  134 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d------~~l~lwd~~t  134 (151)
                      ++++|+++.+-.+-... .......=+.|+..++..|+.++.+      +-+.+.|..+
T Consensus       192 l~i~d~~~~~W~~~~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~~~l~D~~~ldl~~  250 (482)
T KOG0379|consen  192 LHIYDLETSTWSELDTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGDVYLNDVHILDLST  250 (482)
T ss_pred             eeeeccccccceecccCCCCCCCCCCceEEEECCeEEEEeccccCCceecceEeeeccc
Confidence            99999999884443332 2222345678888899999888887      3466677766

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=83.90  E-value=7.6  Score=35.26  Aligned_cols=70  Identities=24%  Similarity=0.405  Sum_probs=50.2

Q ss_pred             CceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEE------EEE--------------ecCCCCCceeEEEEe---CCEEEE
Q psy16020         63 HSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLK------SFD--------------AHPRRESQVRQMTWA---GDGVWV  119 (151)
Q Consensus        63 ~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~------~~~--------------~h~~~~~~I~~m~~~---~~~vwi  119 (151)
                      .-..|+.. .+-|++|+++.|+|++++...-..      .+.              ..+ ....|+.|...   +..|++
T Consensus        41 NNLtalsq-~n~LFiA~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p-~PHtIN~i~v~~lg~~EVLl  118 (717)
T PF08728_consen   41 NNLTALSQ-RNLLFIAYQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWP-FPHTINFIKVGDLGGEEVLL  118 (717)
T ss_pred             cceeEEec-CCEEEEEECCEEEEEecCCcccccccccccccccCccccccccccccCCC-CCceeeEEEecccCCeeEEE
Confidence            44555555 778999999999999987543211      111              011 23569999887   678899


Q ss_pred             EEcCCCeEEEEeCCc
Q psy16020        120 SIRLDSTLRMYNAHT  134 (151)
Q Consensus       120 s~~~d~~l~lwd~~t  134 (151)
                      .+.+||.|.+|-+++
T Consensus       119 ~c~DdG~V~~Yyt~~  133 (717)
T PF08728_consen  119 LCTDDGDVLAYYTET  133 (717)
T ss_pred             EEecCCeEEEEEHHH
Confidence            999999999998864

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=83.81  E-value=14  Score=26.62  Aligned_cols=106  Identities=17%  Similarity=0.196  Sum_probs=69.0

Q ss_pred             eEEEEecCCcEEEEEcCCCCC----CCCCcceEEEeCCCCCceEEEeee-------CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020         27 RVVCALADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAV-------YNKVWCGYKNKIHVVDPKSLVVLK   95 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~----wd~~~~~~i~l~~~~~pV~~m~~v-------~~~Lw~g~~n~I~vid~~t~~i~~   95 (151)
                      .+-+|..-|+|.|++....+.    ++ +....+.++   +.|+||+.-       .+.|.+|+.+.+.++|.+.-.-.-
T Consensus        12 cL~~aT~~gKV~IH~ph~~~~~~~~~~-~~i~~LNin---~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~F   87 (136)
T PF14781_consen   12 CLACATTGGKVFIHNPHERGQRTGRQD-SDISFLNIN---QEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLF   87 (136)
T ss_pred             eEEEEecCCEEEEECCCcccccccccc-CceeEEECC---CceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhh
Confidence            577888899999997653221    21 122344554   789999763       267999999999999988544222


Q ss_pred             EEEecCCCCCceeEEEEe--C--CEEEEEEcCCCeEEEEeCCccceeee
Q psy16020         96 SFDAHPRRESQVRQMTWA--G--DGVWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~--~--~~vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      .-+.+ |   -|++|.+.  +  ..-|+-.+..+.|.=||.+--|....
T Consensus        88 yke~~-D---Gvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   88 YKEVP-D---GVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             hhhCc-c---ceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence            22222 3   67777774  1  12367777778888888775555443

>KOG1538|consensus

Probab=83.80  E-value=3.7  Score=37.09  Aligned_cols=123  Identities=15%  Similarity=0.179  Sum_probs=72.9

Q ss_pred             CCceeeeeeCC-CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020          5 HPTPYPLNKIL-DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK   80 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~   80 (151)
                      ....|+.+|=+ |.|.|..|. ++..|++.+ |-.+.+|+-.-.        ..++.+ +...|.||.++. ++.-++|.
T Consensus        42 dG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE--------G~LkYS-H~D~IQCMsFNP~~h~LasCs  112 (1081)
T KOG1538|consen   42 DGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE--------GILKYS-HNDAIQCMSFNPITHQLASCS  112 (1081)
T ss_pred             CcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccc--------ceeeec-cCCeeeEeecCchHHHhhhcc
Confidence            45567778744 899999995 557777654 445666654322        344544 347899999986 55556665


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       +..-.|.++...+.+    |. ....+.+-.+..+|- ++-+--+++|.+-+.. +|.--.|+
T Consensus       113 LsdFglWS~~qK~V~K----~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~  170 (1081)
T KOG1538|consen  113 LSDFGLWSPEQKSVSK----HK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIE  170 (1081)
T ss_pred             hhhccccChhhhhHHh----hh-hheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEe
Confidence             455566665443322    21 122455555556665 5555567887777543 55544443

>KOG1523|consensus

Probab=83.46  E-value=23  Score=29.31  Aligned_cols=115  Identities=11%  Similarity=0.078  Sum_probs=75.9

Q ss_pred             CCCceeeeEEeCCe--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeC
Q psy16020         14 ILDTALPPVHVQGR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~   88 (151)
                      +..+|+|..+..++  +-++-.|-.|-||+......|..  .+  .+..+..+|+++.-.  .++|-.++ +.+=|||..
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~--~h--tls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEP--AH--TLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCcee--ce--ehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence            66899999997664  66677677999999875544632  12  444455899997775  36766555 457899987


Q ss_pred             -CCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCC
Q psy16020         89 -KSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus        89 -~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~  133 (151)
                       +.++=+.++..- +-....+++..++..- +..++....|.+|=-+
T Consensus        85 ~~~~~WkptlvLl-RiNrAAt~V~WsP~enkFAVgSgar~isVcy~E  130 (361)
T KOG1523|consen   85 PSGGTWKPTLVLL-RINRAATCVKWSPKENKFAVGSGARLISVCYYE  130 (361)
T ss_pred             CCCCeeccceeEE-EeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence             555555554421 1124888888885543 6667777777776444

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=83.24  E-value=19  Score=30.90  Aligned_cols=100  Identities=16%  Similarity=0.214  Sum_probs=63.6

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C--EEEEEe--CC-eEEEEeCCCCcEEEEEE
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N--KVWCGY--KN-KIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~--~Lw~g~--~n-~I~vid~~t~~i~~~~~   98 (151)
                      ..+++.+..+|.|.......++.    ....-.+|.-..+-.++...+ +  .|++|+  |+ .++-+....+++..++.
T Consensus       222 ~~~~lL~~e~G~l~~l~l~~~~~----~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~  297 (504)
T PF10433_consen  222 GDRILLQDEDGDLYLLTLDNDGG----SISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP  297 (504)
T ss_dssp             SSEEEEEETTSEEEEEEEEEEEE----EEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE-
T ss_pred             CCEEEEEeCCCeEEEEEEEECCC----eEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc
Confidence            45799999999999988765442    112233442125667888875 5  899999  34 68888888888888888


Q ss_pred             ecCCCCCceeEEEEeCC------------EEEEEEc--CCCeEEEEeC
Q psy16020         99 AHPRRESQVRQMTWAGD------------GVWVSIR--LDSTLRMYNA  132 (151)
Q Consensus        99 ~h~~~~~~I~~m~~~~~------------~vwis~~--~d~~l~lwd~  132 (151)
                      --    .+|..|+....            .+|.+.+  +++.|++..-
T Consensus       298 N~----~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~  341 (504)
T PF10433_consen  298 NW----GPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN  341 (504)
T ss_dssp             -------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE
T ss_pred             Cc----CCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec
Confidence            44    48888888622            4555544  4777887643

...

>KOG2114|consensus

Probab=83.21  E-value=33  Score=31.86  Aligned_cols=83  Identities=10%  Similarity=0.038  Sum_probs=62.4

Q ss_pred             eeCCCceeeeEEeCC-e--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEE
Q psy16020         12 NKILDTALPPVHVQG-R--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVV   86 (151)
Q Consensus        12 i~l~~~V~~i~~~~~-~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vi   86 (151)
                      .+..+||+-|.+... .  +||++ --.|..|...  |.    .|....+.....|++|-.+.+  .++-||.++.++.+
T Consensus       168 ~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~--gr----~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY  240 (933)
T KOG2114|consen  168 HRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLS--GR----TPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFY  240 (933)
T ss_pred             ccCCCCceeeEEecCCceeEEEEe-cceeEEEEec--CC----CcceeeeccCCccceeeecCCCCccEEEecCceEEEE
Confidence            345579999988543 2  69999 4588888875  31    244444555458999999985  45889999999999


Q ss_pred             eCCCCcEEEEEE-ecC
Q psy16020         87 DPKSLVVLKSFD-AHP  101 (151)
Q Consensus        87 d~~t~~i~~~~~-~h~  101 (151)
                      |++..+..-.|+ +|+
T Consensus       241 ~sd~~~~cfaf~~g~k  256 (933)
T KOG2114|consen  241 DSDGRGPCFAFEVGEK  256 (933)
T ss_pred             cCCCcceeeeecCCCe
Confidence            999999999999 664

>KOG1064|consensus

Probab=83.01  E-value=1.8  Score=42.88  Aligned_cols=72  Identities=11%  Similarity=0.177  Sum_probs=55.3

Q ss_pred             CCceEEEeeeCCE-EEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         62 HHSVRSLAAVYNK-VWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        62 ~~pV~~m~~v~~~-Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      .+.++|++++.++ |...+|  +.|++||++-.|..++|++          +  ....-+++++..+.+++|+...+.++
T Consensus      2336 ~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~----------~--~~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2336 DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA----------L--DTREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred             CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh----------h--hhhheeeccCcccceEEEEccccchh
Confidence            3889999999754 776665  6899999998887776665          1  12333778899999999999999888


Q ss_pred             eeEeCCc
Q psy16020        139 QDVDIEP  145 (151)
Q Consensus       139 ~~idi~~  145 (151)
                      ..+-.+.
T Consensus      2404 ~~~p~e~ 2410 (2439)
T KOG1064|consen 2404 HTFPSEH 2410 (2439)
T ss_pred             hcCchhh
Confidence            8775443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=82.93  E-value=27  Score=29.28  Aligned_cols=69  Identities=19%  Similarity=0.125  Sum_probs=41.7

Q ss_pred             CceEEEeee--CCEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEE--eC
Q psy16020         63 HSVRSLAAV--YNKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMY--NA  132 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lw--d~  132 (151)
                      .++.+....  +++|...+ +   ..|+++|..+++..+ +....   ..+....++++|  +.++.++++..++|  |.
T Consensus       196 ~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~---g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~  271 (427)
T PRK02889        196 EPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFK---GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNA  271 (427)
T ss_pred             CCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCC---CCccceEECCCCCEEEEEEccCCCceEEEEEC
Confidence            677776665  35666554 2   369999999998654 33222   245567777665  44455666654544  55


Q ss_pred             Ccc
Q psy16020        133 HTY  135 (151)
Q Consensus       133 ~t~  135 (151)
                      .+.
T Consensus       272 ~~~  274 (427)
T PRK02889        272 DGS  274 (427)
T ss_pred             CCC
Confidence            443

>KOG1354|consensus

Probab=82.93  E-value=7.1  Score=32.62  Aligned_cols=72  Identities=11%  Similarity=0.282  Sum_probs=50.9

Q ss_pred             CceEEEeee--CCEEEEEeC-CeEEEEeCC-CCc----EEEEEEecCCC---------CCceeEEEEe---CCEEEEEEc
Q psy16020         63 HSVRSLAAV--YNKVWCGYK-NKIHVVDPK-SLV----VLKSFDAHPRR---------ESQVRQMTWA---GDGVWVSIR  122 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~-n~I~vid~~-t~~----i~~~~~~h~~~---------~~~I~~m~~~---~~~vwis~~  122 (151)
                      .-|.++.+.  ++.|+.|++ ++|.++.-+ +.+    ....|+.|...         +..|+.+...   +...++-..
T Consensus        26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlst  105 (433)
T KOG1354|consen   26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLST  105 (433)
T ss_pred             cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEec
Confidence            556777775  688999995 688888644 333    66778878643         2356666665   334478888


Q ss_pred             CCCeEEEEeCCc
Q psy16020        123 LDSTLRMYNAHT  134 (151)
Q Consensus       123 ~d~~l~lwd~~t  134 (151)
                      +|-+|++|-.+.
T Consensus       106 NdktiKlWKi~e  117 (433)
T KOG1354|consen  106 NDKTIKLWKIRE  117 (433)
T ss_pred             CCcceeeeeeec
Confidence            999999999874

>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical

Probab=82.69  E-value=6.8  Score=22.23  Aligned_cols=27  Identities=11%  Similarity=-0.034  Sum_probs=22.3

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcC
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRG   43 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~   43 (151)
                      .+.++.-.++++|++-.++-|.|++..
T Consensus         3 ~a~~v~v~g~yaYva~~~~Gl~IvDIS   29 (42)
T PF08309_consen    3 DARDVAVSGNYAYVADGNNGLVIVDIS   29 (42)
T ss_pred             eEEEEEEECCEEEEEeCCCCEEEEECC
Confidence            456777889999999888889999875

The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.

>KOG1275|consensus

Probab=81.54  E-value=8.1  Score=36.05  Aligned_cols=68  Identities=10%  Similarity=0.184  Sum_probs=57.1

Q ss_pred             CEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         73 NKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        73 ~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .-+|.|-.+.+..+|..+.+..+.......   .|+-|.. .+.++.+++..|+|-|-|..+++...++|.-
T Consensus       149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~---~v~imR~-Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH  216 (1118)
T KOG1275|consen  149 TLIMGGLQEKLIHIDLNTEKETRTTNVSAS---GVTIMRY-NNRNLFCGDTRGTVFLRDPNSFETIHTFDAH  216 (1118)
T ss_pred             ceeecchhhheeeeecccceeeeeeeccCC---ceEEEEe-cCcEEEeecccceEEeecCCcCceeeeeecc
Confidence            347777789999999999999888887643   5888877 4566889999999999999999999999853

>PHA02790 Kelch-like protein; Provisional

Probab=81.48  E-value=23  Score=30.31  Aligned_cols=111  Identities=12%  Similarity=0.038  Sum_probs=60.6

Q ss_pred             eeeeCCCceeeeEEeCCeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCCCCCce--EEEeeeCCEEEEEeC----
Q psy16020         10 PLNKILDTALPPVHVQGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK----   80 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~~~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~m~~v~~~Lw~g~~----   80 (151)
                      .++.-|-.-.+....++++|+.++.   .++-.|+. ..+.|..       +..-..|.  .+++..+++||+-.|    
T Consensus       303 ~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp-~~n~W~~-------~~~l~~~r~~~~~~~~~g~IYviGG~~~~  374 (480)
T PHA02790        303 PPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFH-GDAAWVN-------MPSLLKPRCNPAVASINNVIYVIGGHSET  374 (480)
T ss_pred             CCCCchhhcceEEEECCEEEEECCcCCCCceEEEEC-CCCeEEE-------CCCCCCCCcccEEEEECCEEEEecCcCCC
Confidence            3333333335566678899987764   23445543 2345632       21111233  245566899997654    


Q ss_pred             -CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020         81 -NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t  134 (151)
                       +.+..+|+++.+=...-.. .++   .-.+++..++.+++.++   ....||.++
T Consensus       375 ~~~ve~ydp~~~~W~~~~~m~~~r---~~~~~~~~~~~IYv~GG---~~e~ydp~~  424 (480)
T PHA02790        375 DTTTEYLLPNHDQWQFGPSTYYPH---YKSCALVFGRRLFLVGR---NAEFYCESS  424 (480)
T ss_pred             CccEEEEeCCCCEEEeCCCCCCcc---ccceEEEECCEEEEECC---ceEEecCCC
Confidence             4577888887553221111 111   22355566788887764   467788875

>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats

Probab=81.33  E-value=2.4  Score=20.91  Aligned_cols=19  Identities=21%  Similarity=0.405  Sum_probs=14.9

Q ss_pred             CceEEEeee-CCEEEEEeCC
Q psy16020         63 HSVRSLAAV-YNKVWCGYKN   81 (151)
Q Consensus        63 ~pV~~m~~v-~~~Lw~g~~n   81 (151)
                      ..|+||..- ++.||+|..|
T Consensus         5 n~I~~i~~D~~G~lWigT~~   24 (24)
T PF07494_consen    5 NNIYSIYEDSDGNLWIGTYN   24 (24)
T ss_dssp             SCEEEEEE-TTSCEEEEETS
T ss_pred             CeEEEEEEcCCcCEEEEeCC
Confidence            789998885 5889999864

These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=81.31  E-value=26  Score=27.99  Aligned_cols=111  Identities=14%  Similarity=0.059  Sum_probs=59.6

Q ss_pred             eeeEEeCCeEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCce--EEEeeeCCEEEEEeC-------CeE
Q psy16020         19 LPPVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK-------NKI   83 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV--~~m~~v~~~Lw~g~~-------n~I   83 (151)
                      .+....++++|+-.+ ++     .+..|+... ..|+.   ....+..-..|.  .+++..+++||+..|       +.+
T Consensus        66 ~~~~~~~~~lyviGG~~~~~~~~~v~~~d~~~-~~w~~---~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v  141 (323)
T TIGR03548        66 GASVSVENGIYYIGGSNSSERFSSVYRITLDE-SKEEL---ICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKS  141 (323)
T ss_pred             eEEEEECCEEEEEcCCCCCCCceeEEEEEEcC-Cceee---eeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceE
Confidence            344555778777543 22     344555432 33421   011233211233  345566899887654       479


Q ss_pred             EEEeCCCCcEEEE--EEecCCCCCceeEEEEeCCEEEEEEcCCC----eEEEEeCCccc
Q psy16020         84 HVVDPKSLVVLKS--FDAHPRRESQVRQMTWAGDGVWVSIRLDS----TLRMYNAHTYQ  136 (151)
Q Consensus        84 ~vid~~t~~i~~~--~~~h~~~~~~I~~m~~~~~~vwis~~~d~----~l~lwd~~t~~  136 (151)
                      +++|+++.+=.+.  +....   ..-..++..++.+++.++.++    .+..||.++.+
T Consensus       142 ~~yd~~~~~W~~~~~~p~~~---r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~  197 (323)
T TIGR03548       142 YLFNLETQEWFELPDFPGEP---RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ  197 (323)
T ss_pred             EEEcCCCCCeeECCCCCCCC---CCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence            9999987663321  21111   122344556888888887653    35688887643

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=80.65  E-value=3.6  Score=21.25  Aligned_cols=25  Identities=20%  Similarity=0.159  Sum_probs=22.2

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEE
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFR   41 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~   41 (151)
                      .|.+|...++.+.|+.+.+-|.+|+
T Consensus         3 ~i~aia~g~~~vavaTS~~~lRifs   27 (27)
T PF12341_consen    3 EIEAIAAGDSWVAVATSAGYLRIFS   27 (27)
T ss_pred             eEEEEEccCCEEEEEeCCCeEEecC
Confidence            5788888999999999999999984

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=80.60  E-value=30  Score=28.28  Aligned_cols=71  Identities=18%  Similarity=0.046  Sum_probs=43.6

Q ss_pred             CceEEEeee--CCEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCC--CeEEEEeC
Q psy16020         63 HSVRSLAAV--YNKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLD--STLRMYNA  132 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d--~~l~lwd~  132 (151)
                      .++.+....  ++.|+.++ +   ..|+++|.++++...... +.   ..+..+.++++  .+.++.+.+  ..|++||.
T Consensus       190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~-~~---~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~  265 (417)
T TIGR02800       190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS-FP---GMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDL  265 (417)
T ss_pred             CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec-CC---CCccceEECCCCCEEEEEECCCCCccEEEEEC
Confidence            566666665  35565544 2   479999999987654332 32   23445666655  455555544  46999998


Q ss_pred             Cccce
Q psy16020        133 HTYQH  137 (151)
Q Consensus       133 ~t~~~  137 (151)
                      .+.+.
T Consensus       266 ~~~~~  270 (417)
T TIGR02800       266 DGKQL  270 (417)
T ss_pred             CCCCE
Confidence            87543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1900|consensus

Probab=80.27  E-value=5.6  Score=38.16  Aligned_cols=97  Identities=18%  Similarity=0.185  Sum_probs=60.1

Q ss_pred             eeCC---CceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEe
Q psy16020         12 NKIL---DTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVD   87 (151)
Q Consensus        12 i~l~---~~V~~i~~-~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid   87 (151)
                      ++++   ..|.||.| .+|++|.|+.||.|.=+.+.....|-.+-.+.+.++.  +-.-.|...             ++ 
T Consensus       172 ~~i~~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~--s~ls~lvPs-------------~~-  235 (1311)
T KOG1900|consen  172 FKISVDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTK--SVLSSLVPS-------------LL-  235 (1311)
T ss_pred             eeeecCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCch--hHHHHhhhh-------------hh-
Confidence            5555   48999996 4679999999997665555666678665455555543  111111110             00 


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCc
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t  134 (151)
                             +.+-.+.   .+|..|+.+.+ ++..+.++-++++.||..+
T Consensus       236 -------~~~~~~~---dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  236 -------SVPGSSK---DPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             -------cCCCCCC---CcceeeEeccccceeeeeccCceEEEEEccC
Confidence                   1111122   37888888744 6678888888888888875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	151
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.53
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.45
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.42
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.41
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.4
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.39
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.39
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.38
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.37
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.37
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.37
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.37
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.36
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.36
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.36
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.36
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.35
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.35
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.34
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.34
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.33
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.33
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.32
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.31
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.31
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.3
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.3
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.3
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.29
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.28
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.28
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.28
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.28
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.27
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.27
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.26
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.26
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.26
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.26
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.25
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.25
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.23
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.23
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.23
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.22
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.21
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.21
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.21
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.21
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.21
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.21
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.21
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.2
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.2
2pm7_B	297	Protein transport protein SEC13, protein transport	99.2
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.2
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.2
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.19
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.18
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.18
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.18
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.18
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.17
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.17
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.15
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.15
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.15
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.15
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.14
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.14
2pm7_B	297	Protein transport protein SEC13, protein transport	99.12
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.12
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.12
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.11
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.11
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.11
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.11
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.11
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.1
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.1
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.1
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.09
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.08
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.08
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.08
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.08
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.08
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.07
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.07
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.07
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.07
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.06
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.06
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.05
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.05
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.04
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.04
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.04
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.04
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.03
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.03
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.03
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.02
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.02
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.01
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.01
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	98.99
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	98.98
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	98.98
3jro_A	753	Fusion protein of protein transport protein SEC13	98.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	98.97
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	98.97
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.96
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.96
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.95
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	98.95
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	98.93
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.93
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	98.93
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	98.92
3jro_A	753	Fusion protein of protein transport protein SEC13	98.92
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	98.91
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	98.91
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.9
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	98.89
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.87
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	98.87
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.85
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	98.85
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	98.85
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.83
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	98.82
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	98.8
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	98.78
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.76
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.76
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.75
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	98.74
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	98.72
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.69
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.61
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	98.59
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	98.57
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.54
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.53
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.5
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	98.49
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	98.48
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	98.45
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	98.43
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	98.4
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	98.39
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	98.36
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.32
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	98.32
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.22
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	98.11
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.1
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.09
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.06
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.01
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.0
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	97.98
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	97.98
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	97.98
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	97.97
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	97.94
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	97.94
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.93
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	97.92
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	97.92
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	97.91
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.91
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	97.87
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.87
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	97.76
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	97.75
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	97.75
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.75
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.74
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	97.74
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	97.73
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	97.73
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.72
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	97.7
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	97.69
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	97.69
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.69
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	97.69
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.67
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	97.64
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	97.63
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.62
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.61
3ott_A	758	Two-component system sensor histidine kinase; beta	97.6
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.59
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.57
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	97.54
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.53
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.53
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	97.52
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.48
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	97.46
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	97.45
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.45
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.45
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	97.44
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.42
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	97.39
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.34
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	97.29
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.26
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.26
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.26
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	97.26
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.26
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	97.24
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	97.17
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	97.15
3ott_A	758	Two-component system sensor histidine kinase; beta	97.12
1k32_A	1045	Tricorn protease; protein degradation, substrate g	97.1
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	97.08
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	97.04
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	97.0
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.97
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	96.97
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	96.91
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	96.89
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	96.84
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	96.81
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	96.69
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	96.67
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	96.51
1k32_A	1045	Tricorn protease; protein degradation, substrate g	96.47
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	96.46
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	96.45
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	96.36
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	96.35
2ece_A	462	462AA long hypothetical selenium-binding protein;	96.12
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	95.99
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	95.73
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	95.7
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	95.51
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	95.45
2qe8_A	343	Uncharacterized protein; structural genomics, join	95.42
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	95.41
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	95.08
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	94.72
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	94.65
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	94.62
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	94.52
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	94.19
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	94.18
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	94.17
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	94.16
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	93.75
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	93.64
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	93.64
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	93.57
2p4o_A	306	Hypothetical protein; putative lactonase, structur	93.47
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	93.32
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	93.3
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	93.27
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	93.16
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	93.05
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	93.03
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	93.0
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	92.9
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	92.86
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	92.71
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	92.69
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	92.48
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	92.39
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	91.78
3kya_A	496	Putative phosphatase; structural genomics, joint c	91.6
3v65_B	386	Low-density lipoprotein receptor-related protein;	91.46
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	91.43
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	91.17
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	90.67
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	90.29
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	89.87
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	89.82
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	89.65
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	89.63
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	89.6
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	89.43
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	89.36
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	88.83
1q47_A	495	Semaphorin 3A; beta propeller, signaling protein;	88.62
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	88.41
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	87.94
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	87.34
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	87.07
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	86.74
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	86.51
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	85.53
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	85.23
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	85.22
3s9j_A	369	Member of DUF4221 family; 6-bladed beta-propeller,	85.09
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	84.33
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	84.14
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	82.23
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	81.09
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	80.15

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.53  E-value=6.9e-13  Score=105.89  Aligned_cols=127  Identities=17%  Similarity=0.151  Sum_probs=99.6

Q ss_pred             eeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEE
Q psy16020         11 LNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVV   86 (151)
Q Consensus        11 ~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vi   86 (151)
                      .++..+.|.++.+.+ +++++|..||+|.+|+...+..   .......+..+..+|+|+.+..  +.|..|+. +.|++|
T Consensus        78 ~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~---~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw  154 (344)
T 4gqb_B           78 GVQTEAGVADLTWVGERGILVASDSGAVELWELDENET---LIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW  154 (344)
T ss_dssp             EEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSS---CEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCc---eeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            344456899999875 5799999999999999864321   1111223333468999999973  56888875 689999


Q ss_pred             eCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         87 DPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |+++++..+++.+|++   .|.++.++++  .+++|++.|+.|++||.++.++...+..
T Consensus       155 d~~~~~~~~~~~~h~~---~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~  210 (344)
T 4gqb_B          155 DLAQQVVLSSYRAHAA---QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC  210 (344)
T ss_dssp             ETTTTEEEEEECCCSS---CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred             ECCCCcEEEEEcCcCC---ceEEEEecCCCCCceeeeccccccccccccccceeeeeec
Confidence            9999999999999975   8999999855  4789999999999999999998887743

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.45  E-value=1.8e-11  Score=99.18  Aligned_cols=130  Identities=14%  Similarity=0.126  Sum_probs=101.1

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcce-EEEeCCCCCceEEEeeeCCEEEEEeC-
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAVYNKVWCGYK-   80 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~-~i~l~~~~~pV~~m~~v~~~Lw~g~~-   80 (151)
                      .+.+++..++-+ ++|.++.+.++.+++|..||+|.+|+.....     ... ...+..+..+|+++.+.++.|.+|+. 
T Consensus       201 ~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d  275 (435)
T 1p22_A          201 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT-----DITLRRVLVGHRAAVNVVDFDDKYIVSASGD  275 (435)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSS-----CCEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred             CCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCC-----CceeeeEecCCCCcEEEEEeCCCEEEEEeCC
Confidence            345566666544 6777787777778888888888888765322     111 12333445899999998899999985 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.|++||.++++..+++.+|..   .|.++...+. ..++++.|+.|++||.++++++..+.
T Consensus       276 g~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~  333 (435)
T 1p22_A          276 RTIKVWNTSTCEFVRTLNGHKR---GIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVLE  333 (435)
T ss_dssp             SEEEEEETTTCCEEEEEECCSS---CEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             CeEEEEECCcCcEEEEEcCCCC---cEEEEEeCCC-EEEEEeCCCeEEEEECCCCCEEEEEe
Confidence            6899999999999999999975   8999999765 47799999999999999999998875

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.42  E-value=2.4e-11  Score=98.39  Aligned_cols=128  Identities=15%  Similarity=0.119  Sum_probs=104.3

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-C
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-N   81 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n   81 (151)
                      .+.+++..++-+ ++|.++.+.++.+++|..||+|.+|+...+     +  ....+..+..+|+|+.+.++.+.+|+. +
T Consensus       147 ~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~-----~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg  219 (445)
T 2ovr_B          147 VTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG-----E--CIHTLYGHTSTVRCMHLHEKRVVSGSRDA  219 (445)
T ss_dssp             TTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT-----E--EEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred             CCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcC-----c--EEEEECCCCCcEEEEEecCCEEEEEeCCC
Confidence            456677777644 799999999999999999999999987521     1  122344455899999999999888885 6


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|++||.++++....+.+|..   .|.++...+. ..++++.|+.|++||.++.+.+..+.
T Consensus       220 ~i~~wd~~~~~~~~~~~~~~~---~v~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~  276 (445)
T 2ovr_B          220 TLRVWDIETGQCLHVLMGHVA---AVRCVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQ  276 (445)
T ss_dssp             EEEEEESSSCCEEEEEECCSS---CEEEEEECSS-CEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred             EEEEEECCCCcEEEEEcCCcc---cEEEEEECCC-EEEEEcCCCEEEEEECCCCcEeEEec
Confidence            899999999999999999875   8999998554 47799999999999999999888875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.41  E-value=1.9e-11  Score=94.89  Aligned_cols=113  Identities=18%  Similarity=0.180  Sum_probs=91.6

Q ss_pred             CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020         14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~   88 (151)
                      -.+.|.+|.++++  .+++|..||+|.+|+....     .....+..  +..||+++.+..  +.|..|+. +.|++||.
T Consensus        12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-----~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A           12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-----VEVRSIQV--TETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----EEEEEEEC--CSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-----ceeEEeec--cCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence            3479999999754  6999999999999987521     12233333  348999999974  67888885 68999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                      ++++...++++|++   .|.++.+++++ .++|++.|++|++||.++..
T Consensus        85 ~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~  130 (304)
T 2ynn_A           85 NTGEKVVDFEAHPD---YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW  130 (304)
T ss_dssp             TTCCEEEEEECCSS---CEEEEEECSSSSEEEEEETTSCEEEEEGGGTT
T ss_pred             CCCcEEEEEeCCCC---cEEEEEEcCCCCEEEEECCCCeEEEEECCCCc
Confidence            99999999999986   89999999765 58899999999999998763

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.40  E-value=4.9e-11  Score=93.27  Aligned_cols=133  Identities=12%  Similarity=0.107  Sum_probs=105.4

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-------
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-------   73 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-------   73 (151)
                      .+.+++..++-+ ++|.++.+.++  .++.|..||+|.+|+..        ......+..+..+|+++.+..+       
T Consensus        95 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~  166 (319)
T 3frx_A           95 ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--------GQCLATLLGHNDWVSQVRVVPNEKADDDS  166 (319)
T ss_dssp             TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--------SCEEEEECCCSSCEEEEEECCC------C
T ss_pred             CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence            456677777644 79999998654  69999999999999864        2233445455689999988642       


Q ss_pred             -EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         74 -KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        74 -~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                       .+..|+. +.|++||.++++.+..+.+|..   .|.++.+++++ ..++++.|+.|++||.++.+.+..+.....+
T Consensus       167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v  240 (319)
T 3frx_A          167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNS---NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV  240 (319)
T ss_dssp             CEEEEEETTSCEEEEETTTTEEEEEECCCCS---CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCE
T ss_pred             cEEEEEeCCCEEEEEECCcchhheeecCCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcE
Confidence             5777764 6899999999999999999975   89999999776 4789999999999999999998888654443

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.39  E-value=3.2e-11  Score=94.74  Aligned_cols=127  Identities=15%  Similarity=0.114  Sum_probs=100.1

Q ss_pred             CCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      +.+....+.-+ ..|.++.+.+  +.+.+|..||.|.+|+...+       .....+..+..||+++.+..  ..|..|+
T Consensus       153 ~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~spd~~~l~s~s  225 (321)
T 3ow8_A          153 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-------KLLHTLEGHAMPIRSLTFSPDSQLLVTAS  225 (321)
T ss_dssp             TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCCCEEEECTTSCEEEEEC
T ss_pred             CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEcccCCceeEEEEcCCCCEEEEEc
Confidence            34455555544 5788998875  47899999999999987421       11224444568999999974  4577777


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      . +.|++||.++++...++.+|+.   .|.++.+++++ .++|++.|+.|++||.++.++++.+
T Consensus       226 ~dg~i~iwd~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~  286 (321)
T 3ow8_A          226 DDGYIKIYDVQHANLAGTLSGHAS---WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF  286 (321)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             CCCeEEEEECCCcceeEEEcCCCC---ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence            5 6899999999999999999975   89999999765 5889999999999999999988877

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.39  E-value=6.2e-11  Score=95.97  Aligned_cols=129  Identities=13%  Similarity=0.124  Sum_probs=101.8

Q ss_pred             CCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-Ce
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NK   82 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~   82 (151)
                      +.+++..++-+ ++|.++.+.++.+++|..||.|.+|+...+     +  ....+..+..++.++.+.++.|.+|+. +.
T Consensus       268 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  340 (445)
T 2ovr_B          268 TETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-----N--CIHTLTGHQSLTSGMELKDNILVSGNADST  340 (445)
T ss_dssp             GTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC-----C--EEEEECCCCSCEEEEEEETTEEEEEETTSC
T ss_pred             CCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCC-----C--EEEEEcCCcccEEEEEEeCCEEEEEeCCCe
Confidence            44566666644 688888887778888888888888876421     1  122344445899999999999999885 68


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |++||.++++..+++..+......|.++.+++ ..+++++.|+.|++||..+++.+..+
T Consensus       341 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~  398 (445)
T 2ovr_B          341 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTGEFIRNL  398 (445)
T ss_dssp             EEEEETTTCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EEEEECCCCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEEEEECCCCceeeee
Confidence            99999999999999998544446899999975 45889999999999999999998887

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.38  E-value=1.9e-11  Score=97.51  Aligned_cols=130  Identities=12%  Similarity=0.098  Sum_probs=94.6

Q ss_pred             CCCCceeeeeeC-CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EE
Q psy16020          3 YPHPTPYPLNKI-LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l-~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~L   75 (151)
                      ..+.+++..++- .+.|.++.+.++   .+..|..||+|.+|+....     +....+....+...++++.+..  + .|
T Consensus       156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~l  230 (344)
T 4gqb_B          156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP-----KPASQIGCSAPGYLPTSLAWHPQQSEVF  230 (344)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS-----SCEEECC----CCCEEEEEECSSCTTEE
T ss_pred             CCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc-----ceeeeeecceeeccceeeeecCCCCcce
Confidence            356677888774 479999998643   3556788999999987522     1222222222336789998863  3 46


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeee
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      .+|+. +.|++||.++++..+++.+|.+   .|+++++++++  +.+|++.|++|++||.++.+++..
T Consensus       231 ~sg~~dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~  295 (344)
T 4gqb_B          231 VFGDENGTVSLVDTKSTSCVLSSAVHSQ---CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS  295 (344)
T ss_dssp             EEEETTSEEEEEESCC--CCEEEECCSS---CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred             EEeccCCcEEEEECCCCcEEEEEcCCCC---CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence            66775 6899999999999999999975   89999998664  578999999999999999877643

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.37  E-value=9.1e-11  Score=92.35  Aligned_cols=133  Identities=12%  Similarity=0.074  Sum_probs=104.0

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY   79 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~   79 (151)
                      .+.+++..++.+ +.|.++.+.+  +.+.+|..||.+.+|+...... .  ......+..+..+|.|+.+. ++++..|+
T Consensus        85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~-~--~~~~~~~~~h~~~v~~~~~~~~~~l~s~s  161 (340)
T 1got_B           85 YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG-N--VRVSRELAGHTGYLSCCRFLDDNQIVTSS  161 (340)
T ss_dssp             TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB-S--CEEEEEEECCSSCEEEEEEEETTEEEEEE
T ss_pred             CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC-c--ceeEEEecCCCccEEEEEECCCCcEEEEE
Confidence            455677777766 6899998865  4788999999999999753210 1  11122343445899999986 57788877


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      + +.|++||.++++...++.+|+.   .|.++.+++++ .+++++.|+.|++||.++.++.+.+.
T Consensus       162 ~d~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~  223 (340)
T 1got_B          162 GDTTCALWDIETGQQTTTFTGHTG---DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT  223 (340)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred             CCCcEEEEECCCCcEEEEEcCCCC---ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence            5 6899999999999999999975   89999999765 58899999999999999988887764

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.37  E-value=1.6e-11  Score=97.77  Aligned_cols=126  Identities=16%  Similarity=0.177  Sum_probs=95.1

Q ss_pred             eeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEe
Q psy16020         12 NKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVD   87 (151)
Q Consensus        12 i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid   87 (151)
                      ....+.|.++.+.+ +++++|..||+|.+|+...+..   .....+....+..+|+|+.+..  +.|..|+. +.|++||
T Consensus        91 ~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~---~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd  167 (357)
T 4g56_B           91 VQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES---LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD  167 (357)
T ss_dssp             EECSSCEEEEEEETTTEEEEEETTSCEEEC-----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             CCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce---eEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            34557899999875 5799999999999998753221   1111233434468999999974  56877775 6899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      .++++....+.+|+.   .|+++.++++  .++++++.|+.|++||.++.++...+..
T Consensus       168 ~~~~~~~~~~~~h~~---~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~  222 (357)
T 4g56_B          168 LSQKAVLKSYNAHSS---EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF  222 (357)
T ss_dssp             TTTTEEEEEECCCSS---CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC
T ss_pred             CCCCcEEEEEcCCCC---CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee
Confidence            999999999999975   8999999854  4789999999999999999888776643

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.37  E-value=4.7e-11  Score=90.79  Aligned_cols=131  Identities=8%  Similarity=0.060  Sum_probs=98.7

Q ss_pred             ceeeeee--CCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC-C
Q psy16020          7 TPYPLNK--ILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK-N   81 (151)
Q Consensus         7 ~~l~~i~--l~~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~-n   81 (151)
                      +.+..++  .+..|.++.+. ++++++|..||.|.+|+....     +...  .+..+..+|+++.+.. ++|.+|+. +
T Consensus       174 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~-----~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg  246 (313)
T 3odt_A          174 KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG-----DVLR--TYEGHESFVYCIKLLPNGDIVSCGEDR  246 (313)
T ss_dssp             EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC-----CEEE--EEECCSSCEEEEEECTTSCEEEEETTS
T ss_pred             ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch-----hhhh--hhhcCCceEEEEEEecCCCEEEEecCC
Confidence            3445555  34789999886 457999999999999987531     2222  3333459999999985 47887774 6


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      .|++||.++++..+.+..|..   .|.++.+++++-+++++.|+.|++||.++.+...+......+
T Consensus       247 ~v~iwd~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  309 (313)
T 3odt_A          247 TVRIWSKENGSLKQVITLPAI---SIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDEIKGEL  309 (313)
T ss_dssp             EEEEECTTTCCEEEEEECSSS---CEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC--------
T ss_pred             EEEEEECCCCceeEEEeccCc---eEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhhhhhhh
Confidence            999999999999999999864   899999998877889999999999999999988887665543

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.37  E-value=5.6e-11  Score=92.07  Aligned_cols=130  Identities=12%  Similarity=0.160  Sum_probs=99.2

Q ss_pred             ceeeeee--CCCceeeeEEeC------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-----
Q psy16020          7 TPYPLNK--ILDTALPPVHVQ------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-----   73 (151)
Q Consensus         7 ~~l~~i~--l~~~V~~i~~~~------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-----   73 (151)
                      ++...+.  ..++|.+|.+.+      ..++++.++|.|.+|+...++..  .......-..+..+|+++.+..+     
T Consensus         8 ~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~   85 (366)
T 3k26_A            8 KCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI--RLLQSYVDADADENFYTCAWTYDSNTSH   85 (366)
T ss_dssp             EEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEECTTTCC
T ss_pred             EEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE--EeeeeccccCCCCcEEEEEeccCCCCCC
Confidence            3444555  347999999984      45999999999999998643211  11111222223488999999743     


Q ss_pred             -EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         74 -KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        74 -~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                       .|.+|+. +.|++||.++++..+++.+|..   .|.++.+++  ...+++++.|+.|++||.++.+.+..+
T Consensus        86 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  154 (366)
T 3k26_A           86 PLLAVAGSRGIIRIINPITMQCIKHYVGHGN---AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF  154 (366)
T ss_dssp             EEEEEEETTCEEEEECTTTCCEEEEEESCCS---CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             CEEEEecCCCEEEEEEchhceEeeeecCCCC---cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence             5777775 6899999999999999999975   899999986  356889999999999999999888877

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.36  E-value=1.5e-10  Score=88.04  Aligned_cols=126  Identities=20%  Similarity=0.197  Sum_probs=101.1

Q ss_pred             ceeeeeeCC-CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee-CCEEEEEeC
Q psy16020          7 TPYPLNKIL-DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV-YNKVWCGYK   80 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v-~~~Lw~g~~   80 (151)
                      +.+..++.+ .+|.++.+.   ++.+++|..||.|.+|+..        .+ ...+.. +..+|+++.+. ++++.+|+.
T Consensus       133 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--------~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~  203 (313)
T 3odt_A          133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--------KV-IKTFSGIHNDVVRHLAVVDDGHFISCSN  203 (313)
T ss_dssp             EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--------EE-EEEECSSCSSCEEEEEEEETTEEEEEET
T ss_pred             cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--------ce-EEEEeccCcccEEEEEEcCCCeEEEccC
Confidence            445556544 688888874   5689999999999999832        21 222222 45999999997 467888875


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                       +.|++||.++++..+++.+|..   .|.++.+++++.+++++.|+.|++||.++.++++.+...
T Consensus       204 dg~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~  265 (313)
T 3odt_A          204 DGLIKLVDMHTGDVLRTYEGHES---FVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLP  265 (313)
T ss_dssp             TSEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred             CCeEEEEECCchhhhhhhhcCCc---eEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEecc
Confidence             6899999999999999999975   899999998888999999999999999999999888643

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.36  E-value=4.5e-11  Score=96.74  Aligned_cols=129  Identities=17%  Similarity=0.133  Sum_probs=102.5

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~   77 (151)
                      +.+.+++..++-+ ++|.++.+.+  +.+++|..||+|.+|+....       .....+..+..+|+++.+..  +.|..
T Consensus       137 ~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~~~l~s  209 (410)
T 1vyh_C          137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNGDHIVS  209 (410)
T ss_dssp             TTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS-------CEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred             CCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-------ceeEEEcCCCCCEEEEEEeCCCCEEEE
Confidence            3455677777755 7999999874  46899999999999987421       11223444568999999974  56887


Q ss_pred             EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |+. +.|++||.++++..++|.+|..   .|.++.+.+++ .+++++.|+.|++||.++.+....+
T Consensus       210 ~s~D~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~  272 (410)
T 1vyh_C          210 ASRDKTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL  272 (410)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             EeCCCeEEEEECCCCcEEEEEeCCCc---cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence            775 6899999999999999999975   89999998665 4789999999999999998887766

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.36  E-value=1.1e-10  Score=90.52  Aligned_cols=120  Identities=15%  Similarity=0.187  Sum_probs=95.7

Q ss_pred             CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEEEEeC-CeEEEE
Q psy16020         15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYK-NKIHVV   86 (151)
Q Consensus        15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw~g~~-n~I~vi   86 (151)
                      ...|.++.+.+   +.+.+|..||+|.+|+....     .....+..+ +..+|.++.+..    ..|..|+. +.|++|
T Consensus       140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~-----~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW  213 (304)
T 2ynn_A          140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----TPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIW  213 (304)
T ss_dssp             CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS-----SCSEEEECC-CTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred             CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-----CccceeccC-CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence            36899999975   36888999999999997521     122233333 347888888752    35777774 689999


Q ss_pred             eCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         87 DPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        87 d~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |.++++..+++++|..   .|.++.+++++ ..+|++.|+.|++||.+++++++.++.
T Consensus       214 d~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~  268 (304)
T 2ynn_A          214 DYQTKSCVATLEGHMS---NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV  268 (304)
T ss_dssp             ETTTTEEEEEEECCSS---CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             eCCCCccceeeCCCCC---CEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC
Confidence            9999999999999975   89999999765 588999999999999999999998864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.36  E-value=8.4e-11  Score=95.19  Aligned_cols=128  Identities=16%  Similarity=0.088  Sum_probs=102.2

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-C
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-N   81 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n   81 (151)
                      .+.++++.++-+ ++|.++.+.++.+++|..||+|.+|+...+     +  ..-.+..+..+|.++.+.++.+.+|+. +
T Consensus       161 ~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~-----~--~~~~~~~h~~~v~~l~~~~~~l~s~s~dg  233 (435)
T 1p22_A          161 NTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG-----E--MLNTLIHHCEAVLHLRFNNGMMVTCSKDR  233 (435)
T ss_dssp             SSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSC-----C--EEEEECCCCSCEEEEECCTTEEEEEETTS
T ss_pred             CCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCC-----c--EEEEEcCCCCcEEEEEEcCCEEEEeeCCC
Confidence            455667777644 799999998888999999999999987532     1  122344455999999999999998885 6


Q ss_pred             eEEEEeCCCCcEE---EEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         82 KIHVVDPKSLVVL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 ~I~vid~~t~~i~---~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|++||.++++..   +.+.+|..   .|.++...+.. .++++.|+.|++||.++.+.+..+.
T Consensus       234 ~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~  293 (435)
T 1p22_A          234 SIAVWDMASPTDITLRRVLVGHRA---AVNVVDFDDKY-IVSASGDRTIKVWNTSTCEFVRTLN  293 (435)
T ss_dssp             CEEEEECSSSSCCEEEEEECCCSS---CEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             cEEEEeCCCCCCceeeeEecCCCC---cEEEEEeCCCE-EEEEeCCCeEEEEECCcCcEEEEEc
Confidence            8999999987754   66777864   89999997665 6799999999999999999998885

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.35  E-value=1.5e-11  Score=98.00  Aligned_cols=131  Identities=11%  Similarity=0.144  Sum_probs=101.3

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEE
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~L   75 (151)
                      ..+.+++..++-+ +.|.++.+.++   .+.++..||+|.+|+....     +....+.......+++++.+..   ..|
T Consensus       168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~-----~~~~~~~~~~~~~~v~~v~~sp~~~~~l  242 (357)
T 4g56_B          168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP-----KPATRIDFCASDTIPTSVTWHPEKDDTF  242 (357)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS-----SCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred             CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC-----ceeeeeeeccccccccchhhhhcccceE
Confidence            3566778888765 79999998642   5778888999999876421     1222333444458899999863   357


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+|+. +.|++||.++++..+++.+|..   .|+++++++++  +++|++.|++|++||.++.++++.+
T Consensus       243 a~g~~d~~i~~wd~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~  308 (357)
T 4g56_B          243 ACGDETGNVSLVNIKNPDSAQTSAVHSQ---NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL  308 (357)
T ss_dssp             EEEESSSCEEEEESSCGGGCEEECCCSS---CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred             EEeecccceeEEECCCCcEeEEEeccce---eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence            77775 6899999999999999999975   89999998654  5789999999999999999888765

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.35  E-value=1.3e-10  Score=94.00  Aligned_cols=129  Identities=15%  Similarity=0.109  Sum_probs=102.2

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--------
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--------   72 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--------   72 (151)
                      .+.+++..++-+ +.|.++.+.+  +.+++|..||+|.+|+....       .....+..+..+|+|+.+..        
T Consensus       222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~  294 (410)
T 1vyh_C          222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-------ECKAELREHRHVVECISWAPESSYSSIS  294 (410)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred             CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------ceeeEecCCCceEEEEEEcCcccccchh
Confidence            455677777654 6788888864  36888999999999987532       12234444568999998863        


Q ss_pred             --------------CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020         73 --------------NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        73 --------------~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                                    ..|.+|+. +.|++||..+++...++.+|.+   .|+++.+++++- .+|++.|+.|++||..+.+
T Consensus       295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~---~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~  371 (410)
T 1vyh_C          295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKR  371 (410)
T ss_dssp             GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS---CEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred             hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence                          35888885 6899999999999999999975   899999986654 7899999999999999999


Q ss_pred             eeeeEe
Q psy16020        137 HLQDVD  142 (151)
Q Consensus       137 ~l~~id  142 (151)
                      +++.+.
T Consensus       372 ~~~~~~  377 (410)
T 1vyh_C          372 CMKTLN  377 (410)
T ss_dssp             CCEEEE
T ss_pred             eEEEEc
Confidence            888875

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.34  E-value=1e-10  Score=92.89  Aligned_cols=130  Identities=15%  Similarity=0.168  Sum_probs=100.6

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCC-------------------------C-------CCCC
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPD-------------------------G-------QWDL   50 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-------------------------~-------~wd~   50 (151)
                      ..+.+++..++.+++|.++.+.++.++++. +|.|.+|+....                         |       .||+
T Consensus        88 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~  166 (355)
T 3vu4_A           88 DVKKQDVSRIKVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKL  166 (355)
T ss_dssp             TTTTEEEEEEECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEEC
T ss_pred             CCCCcEEEEEECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEEC
Confidence            345678888888899999999888877775 788888877543                         2       1665


Q ss_pred             Ccce-----------------EEEeCCCCCceEEEeeeC--CEEEEEeC-Ce-EEEEeCCCCcEEEEEE-e-cCCCCCce
Q psy16020         51 SKYH-----------------TVTLGLPHHSVRSLAAVY--NKVWCGYK-NK-IHVVDPKSLVVLKSFD-A-HPRRESQV  107 (151)
Q Consensus        51 ~~~~-----------------~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~-I~vid~~t~~i~~~~~-~-h~~~~~~I  107 (151)
                      ....                 ...+..+..+|+++.+..  ..|..|+. ++ |++||.++++..+++. + |..   .|
T Consensus       167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~---~v  243 (355)
T 3vu4_A          167 QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA---DV  243 (355)
T ss_dssp             CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS---CE
T ss_pred             CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC---cE
Confidence            5422                 334555569999999974  45777775 56 9999999999999999 5 764   89


Q ss_pred             eEEEEeCCEE-EEEEcCCCeEEEEeCCccc
Q psy16020        108 RQMTWAGDGV-WVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus       108 ~~m~~~~~~v-wis~~~d~~l~lwd~~t~~  136 (151)
                      +++.+++++- +++++.|+.|++||.++.+
T Consensus       244 ~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          244 VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             EEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred             EEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence            9999997654 7899999999999998653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.34  E-value=8.3e-11  Score=92.39  Aligned_cols=128  Identities=15%  Similarity=0.153  Sum_probs=101.1

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      .+.+++..+... ..+.++.+.+  +.+++|..+|.|.+|+...+     +  ....+..+..+|+++.+..  +.|.+|
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-----~--~~~~~~~~~~~v~~~~~spdg~~lasg  182 (321)
T 3ow8_A          110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-----K--KEYSLDTRGKFILSIAYSPDGKYLASG  182 (321)
T ss_dssp             TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-----S--EEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred             CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-----c--eeEEecCCCceEEEEEECCCCCEEEEE
Confidence            455677777655 6788888865  47899999999999987532     1  2223333348899999974  568877


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +. +.|++||.++++..+++++|..   .|.++.+++++ .+++++.|+.|++||.++.+.+..+
T Consensus       183 ~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~  244 (321)
T 3ow8_A          183 AIDGIINIFDIATGKLLHTLEGHAM---PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL  244 (321)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSS---CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred             cCCCeEEEEECCCCcEEEEEcccCC---ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence            74 6899999999999999999975   89999999765 4889999999999999998887765

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.33  E-value=2.9e-10  Score=87.64  Aligned_cols=126  Identities=15%  Similarity=0.111  Sum_probs=98.6

Q ss_pred             ceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020          7 TPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-   80 (151)
Q Consensus         7 ~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-   80 (151)
                      +....++= .++|.++.+.++  .+++|..||.|.+|+... +    +  ....+..+..+|+++.+..  +.|.+|+. 
T Consensus        14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-~----~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d   86 (312)
T 4ery_A           14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-G----K--FEKTISGHKLGISDVAWSSDSNLLVSASDD   86 (312)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-C----C--EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-c----c--cchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence            33344432 379999999754  688999999999998742 1    1  1223444558999999974  56777775 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.|++||.++++..+++.+|..   .|.++.+.+++ .+++++.|+.|++||.++.+.++.+.
T Consensus        87 ~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  146 (312)
T 4ery_A           87 KTLKIWDVSSGKCLKTLKGHSN---YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP  146 (312)
T ss_dssp             SEEEEEETTTCCEEEEEECCSS---CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             CEEEEEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence            6899999999999999999975   89999998664 58899999999999999998887774

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.33  E-value=2.6e-10  Score=88.17  Aligned_cols=129  Identities=12%  Similarity=0.108  Sum_probs=98.1

Q ss_pred             eeeeeeCC-CceeeeEEeCC-----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020          8 PYPLNKIL-DTALPPVHVQG-----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~~~-----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      .+..++-+ +.|.+|.+.++     .+++|..||.|.+|+....+     ......+..+..+|+++.+..  +.|.+|+
T Consensus        31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  105 (368)
T 3mmy_A           31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-----QTIPKAQQMHTGPVLDVCWSDDGSKVFTAS  105 (368)
T ss_dssp             CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-----CEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred             eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-----ceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence            33444333 79999999864     68889999999999986422     111123333459999999974  5688887


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEE--eCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTW--AGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~--~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      . +.|++||.++++..+. ..|..   .|.++.+  .+++ .+++++.|+.|++||.++.++++.+....
T Consensus       106 ~dg~v~iwd~~~~~~~~~-~~~~~---~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  171 (368)
T 3mmy_A          106 CDKTAKMWDLSSNQAIQI-AQHDA---PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE  171 (368)
T ss_dssp             TTSEEEEEETTTTEEEEE-EECSS---CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred             CCCcEEEEEcCCCCceee-ccccC---ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence            4 6899999999998774 45764   8999998  6554 48899999999999999999998887543

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.32  E-value=2.9e-10  Score=87.04  Aligned_cols=127  Identities=14%  Similarity=0.150  Sum_probs=99.8

Q ss_pred             CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020         14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~   88 (151)
                      ...+|.++.+.++  .+++|..||.|.+|+....     +......+..+..+|+++.+..  +.|++|+. +.|++||.
T Consensus        96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~  170 (337)
T 1gxr_A           96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP-----TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL  170 (337)
T ss_dssp             TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-----CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence            3478999999754  6999999999999987532     1112233444458999999974  56888875 68999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                      ++++..+++..|..   .|.++.+++++ .+++++.|+.|++||.++.+.+..++....+.
T Consensus       171 ~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~  228 (337)
T 1gxr_A          171 HNQTLVRQFQGHTD---GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF  228 (337)
T ss_dssp             TTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred             CCCceeeeeecccC---ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceE
Confidence            99999999998865   89999998665 57889999999999999999998887655443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.31  E-value=3.1e-10  Score=90.90  Aligned_cols=136  Identities=15%  Similarity=0.077  Sum_probs=107.3

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK   80 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~   80 (151)
                      .+.+++..++-+ +.|.++.+.++.+++|..||.|.+|+....+      .....+..+..+|.++.+..  +.|.+|+.
T Consensus       164 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  237 (401)
T 4aez_A          164 ESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIAN------HQIGTLQGHSSEVCGLAWRSDGLQLASGGN  237 (401)
T ss_dssp             TTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS------CEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             cCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCc------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence            455677777644 7999999999999999999999999875322      12223333459999999974  56887775


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEc--CCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIR--LDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~--~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                       +.|++||.++++...++..|..   .|.++.++++  .++++++  .|+.|++||.++.+++..++....+.
T Consensus       238 d~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~  307 (401)
T 4aez_A          238 DNVVQIWDARSSIPKFTKTNHNA---AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVT  307 (401)
T ss_dssp             TSCEEEEETTCSSEEEEECCCSS---CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEE
T ss_pred             CCeEEEccCCCCCccEEecCCcc---eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence             6899999999999999998864   8999999863  5676765  79999999999999999987655443

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.31  E-value=1.7e-10  Score=93.34  Aligned_cols=136  Identities=15%  Similarity=0.125  Sum_probs=106.1

Q ss_pred             CCCceeeeee-CCCceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCC-C--------------Ccc-eEEEeCCCC
Q psy16020          4 PHPTPYPLNK-ILDTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWD-L--------------SKY-HTVTLGLPH   62 (151)
Q Consensus         4 ~~~~~l~~i~-l~~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd-~--------------~~~-~~i~l~~~~   62 (151)
                      .+.+++..++ ..++|.++.+.+    +.+++|..||+|.+|+......-. .              ..+ ..-.+..+.
T Consensus       191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (464)
T 3v7d_B          191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM  270 (464)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred             CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence            4566777777 447999998862    469999999999999986432100 0              000 122333445


Q ss_pred             CceEEEeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeee
Q psy16020         63 HSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        63 ~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      .+|.++...++.+.+|+. +.|++||..+++...++.+|..   .|.++.+++++ .+++++.|+.|++||.+++++++.
T Consensus       271 ~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~  347 (464)
T 3v7d_B          271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD---RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT  347 (464)
T ss_dssp             SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS---CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC---CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence            899999888999999885 6899999999999999999975   89999999664 588999999999999999999988


Q ss_pred             Ee
Q psy16020        141 VD  142 (151)
Q Consensus       141 id  142 (151)
                      +.
T Consensus       348 ~~  349 (464)
T 3v7d_B          348 LQ  349 (464)
T ss_dssp             EC
T ss_pred             Ee
Confidence            84

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.30  E-value=1.3e-10  Score=88.65  Aligned_cols=124  Identities=12%  Similarity=0.072  Sum_probs=94.3

Q ss_pred             CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEeC-CeEEEE
Q psy16020         14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK-NKIHVV   86 (151)
Q Consensus        14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~~-n~I~vi   86 (151)
                      ..++|.+|.+.+  +.+++|..||+|.+|+...+..   .......+..+..+|+++.+.    ++.|.+|+. +.|++|
T Consensus        10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw   86 (351)
T 3f3f_A           10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS---NWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW   86 (351)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSC---CEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred             cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC---cceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence            347999999965  4699999999999999863221   001122333445999999996    356887775 689999


Q ss_pred             eCCCC---------cEEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         87 DPKSL---------VVLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        87 d~~t~---------~i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |.+++         +....+..|..   .|.++.+.++   ...++++.|+.|++||.++.+.++.+..
T Consensus        87 d~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  152 (351)
T 3f3f_A           87 EEDPDQEECSGRRWNKLCTLNDSKG---SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL  152 (351)
T ss_dssp             EECTTSCTTSSCSEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred             ecCCCcccccccCcceeeeecccCC---ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence            99987         56778888864   8999999975   4588999999999999999887766553

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.30  E-value=3.2e-10  Score=89.15  Aligned_cols=125  Identities=15%  Similarity=0.104  Sum_probs=93.4

Q ss_pred             ceeeeeeC-CCceeeeEE--------eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEE
Q psy16020          7 TPYPLNKI-LDTALPPVH--------VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKV   75 (151)
Q Consensus         7 ~~l~~i~l-~~~V~~i~~--------~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~L   75 (151)
                      ++...++= .++|.++.+        .++.++.|..||+|.+|+......-.........+..+..+|+++.+..  ..|
T Consensus        12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l   91 (343)
T 2xzm_R           12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA   91 (343)
T ss_dssp             EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred             eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence            34455553 379999987        3346889999999999998632210000111234555569999999974  457


Q ss_pred             EEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020         76 WCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        76 w~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t  134 (151)
                      ..|+ ++.|++||.++++..+++.+|+.   .|.++.+++++ ..++++.|+.|++||...
T Consensus        92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~---~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~  149 (343)
T 2xzm_R           92 ISSSWDKTLRLWDLRTGTTYKRFVGHQS---EVYSVAFSPDNRQILSAGAEREIKLWNILG  149 (343)
T ss_dssp             EEEETTSEEEEEETTSSCEEEEEECCCS---CEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred             EEEcCCCcEEEEECCCCcEEEEEcCCCC---cEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence            7776 46899999999999999999975   89999999665 478999999999999873

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.30  E-value=3.2e-10  Score=87.38  Aligned_cols=127  Identities=19%  Similarity=0.112  Sum_probs=99.1

Q ss_pred             CCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      ..++...++-. .+|.++.+.+  +.+++|..||.|.+|+...+     +.  ...+..+..+|+++.+..  +.|..|+
T Consensus        54 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~-----~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~  126 (312)
T 4ery_A           54 DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG-----KC--LKTLKGHSNYVFCCNFNPQSNLIVSGS  126 (312)
T ss_dssp             TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CE--EEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred             CcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC-----cE--EEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence            34555566544 6899999875  47889999999999987532     12  223333458999999974  5677777


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      . +.|++||.++++..+.+..|..   .|.++.+++++ .+++++.|+.|++||.++.+.+..+
T Consensus       127 ~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~  187 (312)
T 4ery_A          127 FDESVRIWDVKTGKCLKTLPAHSD---PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL  187 (312)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             CCCcEEEEECCCCEEEEEecCCCC---cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence            4 6899999999999999999975   89999998664 5789999999999999998887766

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.29  E-value=1.6e-10  Score=92.41  Aligned_cols=123  Identities=18%  Similarity=0.186  Sum_probs=96.1

Q ss_pred             CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCC-CCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEEE
Q psy16020         15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQW-DLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVV   86 (151)
Q Consensus        15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~w-d~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~vi   86 (151)
                      .++|.++.+.+   +.+++|..||+|.+|+...++.. ....+ ...+..+..+|+++.+..   +.|..|+. +.|++|
T Consensus        81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw  159 (402)
T 2aq5_A           81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREP-VITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW  159 (402)
T ss_dssp             SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSC-SEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred             CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCc-eEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence            36999999965   57899999999999998654321 11111 123333459999999974   35777774 689999


Q ss_pred             eCCCCcEEEEE--EecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         87 DPKSLVVLKSF--DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        87 d~~t~~i~~~~--~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      |.++++...++  ..|..   .|.++.+++++ .+++++.|+.|++||.++.+.+..+
T Consensus       160 d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  214 (402)
T 2aq5_A          160 DVGTGAAVLTLGPDVHPD---TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK  214 (402)
T ss_dssp             ETTTTEEEEEECTTTCCS---CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             ECCCCCccEEEecCCCCC---ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence            99999999999  77864   89999999665 4889999999999999999998887

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.28  E-value=3.2e-10  Score=88.94  Aligned_cols=124  Identities=13%  Similarity=0.199  Sum_probs=91.5

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK   80 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~   80 (151)
                      ++.++++.++-+ ++|.++.+.++.+.+|..||+|.+|+...+.   ......+..+.+..+|+++.+..  +.|..|+.
T Consensus         2 ~~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~   78 (330)
T 2hes_X            2 ASINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDD---FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF   78 (330)
T ss_dssp             -CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSC---CEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred             cccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCC---eEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence            456778888865 7999999999999999999999999875321   11112222333568999999974  56777774


Q ss_pred             -CeEEEEeCC-------CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCC
Q psy16020         81 -NKIHVVDPK-------SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        81 -n~I~vid~~-------t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~  133 (151)
                       +.|++||.+       +++..+.+.+|+.   .|.++.+++++ .++|++.|+.|++||.+
T Consensus        79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~sp~g~~las~s~D~~v~iwd~~  137 (330)
T 2hes_X           79 DSTVSIWAKEESADRTFEMDLLAIIEGHEN---EVKGVAWSNDGYYLATCSRDKSVWIWETD  137 (330)
T ss_dssp             TSCEEEEEC-------CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred             CCcEEEEEcccCcCccccceeEEEEcCCCC---cEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence             689999984       3567788999975   89999999765 48899999999999994

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.28  E-value=7.9e-11  Score=92.53  Aligned_cols=128  Identities=10%  Similarity=-0.015  Sum_probs=94.6

Q ss_pred             CCCceeeeeeCC--CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEE
Q psy16020          4 PHPTPYPLNKIL--DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKV   75 (151)
Q Consensus         4 ~~~~~l~~i~l~--~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~L   75 (151)
                      .+.++++..+++  ++|.++.+++    +.+.+|..||+|.+|+...+.      ...+..+....+|+|+.+..  ..|
T Consensus       112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~------~~~~~~~~~~~~i~~~~~~pdg~~l  185 (343)
T 3lrv_A          112 KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS------QYIVHSAKSDVEYSSGVLHKDSLLL  185 (343)
T ss_dssp             TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC------EEEEECCCSSCCCCEEEECTTSCEE
T ss_pred             CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc------EEEEEecCCCCceEEEEECCCCCEE
Confidence            345557777766  6799999866    467779999999999875321      11222233346899999974  456


Q ss_pred             EEEe-CCeEEEEeCCCCcEE-EEEEe-cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         76 WCGY-KNKIHVVDPKSLVVL-KSFDA-HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        76 w~g~-~n~I~vid~~t~~i~-~~~~~-h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+|+ ++.|++||.++++.. .+|++ |..   .|+++.+++++- +++++ ++.|++||.++.+..+.+
T Consensus       186 asg~~dg~i~iwd~~~~~~~~~~~~~~h~~---~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~  251 (343)
T 3lrv_A          186 ALYSPDGILDVYNLSSPDQASSRFPVDEEA---KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY  251 (343)
T ss_dssp             EEECTTSCEEEEESSCTTSCCEECCCCTTS---CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred             EEEcCCCEEEEEECCCCCCCccEEeccCCC---CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence            6666 468999999999987 88988 864   999999998776 45555 559999999998776554

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.28  E-value=7.2e-10  Score=88.77  Aligned_cols=130  Identities=15%  Similarity=0.171  Sum_probs=104.2

Q ss_pred             CCCCceeeeeeC--CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020          3 YPHPTPYPLNKI--LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG   78 (151)
Q Consensus         3 ~~~~~~l~~i~l--~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g   78 (151)
                      ..+.++...+..  .+.|.++.+.+  +.+++|..||.|.+|+...+     +  ....+..+..+|.++...++.|.+|
T Consensus       120 ~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~-----~--~~~~~~~~~~~v~~~~~~~~~l~~~  192 (401)
T 4aez_A          120 ADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ-----T--KLRTMAGHQARVGCLSWNRHVLSSG  192 (401)
T ss_dssp             TTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC-----C--EEEEECCCSSCEEEEEEETTEEEEE
T ss_pred             CCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC-----e--EEEEecCCCCceEEEEECCCEEEEE
Confidence            345667777776  47899999975  47999999999999987532     1  2223444569999999988899988


Q ss_pred             eC-CeEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         79 YK-NKIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        79 ~~-n~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +. +.|++||.+ ..+....+.+|..   .|.++.+++++ .+++++.|+.|++||.++.+++..+.
T Consensus       193 ~~dg~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~  256 (401)
T 4aez_A          193 SRSGAIHHHDVRIANHQIGTLQGHSS---EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT  256 (401)
T ss_dssp             ETTSEEEEEETTSSSCEEEEEECCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred             cCCCCEEEEecccCcceeeEEcCCCC---CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence            85 689999999 5778888999975   89999999664 58899999999999999988887763

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.28  E-value=9.4e-10  Score=89.00  Aligned_cols=118  Identities=13%  Similarity=0.088  Sum_probs=97.0

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCc
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLV   92 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~   92 (151)
                      .+|.++...++.+++|..||.|.+|+....       .....+..+..+|+++.+..  +.|.+|+. +.|++||.++++
T Consensus       271 ~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~  343 (464)
T 3v7d_B          271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQM-------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE  343 (464)
T ss_dssp             SCEEEEEEETTEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred             ceEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence            688899888999999999999999987521       12234444569999999974  57888885 689999999999


Q ss_pred             EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         93 VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        93 i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ..+++.+|+.   .|.++.+++ ...++++.|+.|++||.++.+....+.-.
T Consensus       344 ~~~~~~~h~~---~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~  391 (464)
T 3v7d_B          344 LMYTLQGHTA---LVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSYHHT  391 (464)
T ss_dssp             EEEEECCCSS---CEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEECT
T ss_pred             EEEEEeCCCC---cEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeeecCC
Confidence            9999999975   899999985 45789999999999999998877776533

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.27  E-value=3.4e-10  Score=89.23  Aligned_cols=123  Identities=12%  Similarity=0.115  Sum_probs=97.2

Q ss_pred             CCCceeeeeeC-------CCceeeeEEeC--CeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCC-----------
Q psy16020          4 PHPTPYPLNKI-------LDTALPPVHVQ--GRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGL-----------   60 (151)
Q Consensus         4 ~~~~~l~~i~l-------~~~V~~i~~~~--~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~-----------   60 (151)
                      .+.+++..++.       ..+|.++.+.+  +.+++|..|   |.|.+|+....     +...  .+..           
T Consensus       215 ~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-----~~~~--~~~~~~~~~~~~~~~  287 (397)
T 1sq9_A          215 STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-----ERIG--SLSVPTHSSQASLGE  287 (397)
T ss_dssp             TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-----CEEE--EECBC--------CC
T ss_pred             CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-----cccc--eeccCcccccccccc
Confidence            45677888887       77999999864  578889989   99999997532     1222  2322           


Q ss_pred             --CCCceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEE------ec---------------CCCCCceeEEEEeC
Q psy16020         61 --PHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFD------AH---------------PRRESQVRQMTWAG  114 (151)
Q Consensus        61 --~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~------~h---------------~~~~~~I~~m~~~~  114 (151)
                        +..+|+++.+.  ++.|.+|+. +.|++||.++++...++.      +|               .   ..|+++.+++
T Consensus       288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~v~~~~~~~  364 (397)
T 1sq9_A          288 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE---PGVFDVKFLK  364 (397)
T ss_dssp             BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS---CCEEEEEEEC
T ss_pred             cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC---CceeEEEecc
Confidence              45899999997  456888874 689999999999999999      76               4   4899999998


Q ss_pred             CE-----------EEEEEcCCCeEEEEeCCccc
Q psy16020        115 DG-----------VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus       115 ~~-----------vwis~~~d~~l~lwd~~t~~  136 (151)
                      ++           .+++++.|+.|++||..+++
T Consensus       365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            85           89999999999999998763

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.27  E-value=5.9e-10  Score=88.48  Aligned_cols=134  Identities=13%  Similarity=0.123  Sum_probs=103.3

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCC-CcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDL-SKYHTVTLGLPHHSVRSLAAVY--NKVWC   77 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~-~~~~~i~l~~~~~pV~~m~~v~--~~Lw~   77 (151)
                      .+.++.+.+..+ ..|.++.+.+  +.+.+|..||.+.+|+...+..-.. .....+..  +..+|.++.+..  ..|..
T Consensus        94 ~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t  171 (354)
T 2pbi_B           94 FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM--HTNYLSACSFTNSDMQILT  171 (354)
T ss_dssp             TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE--CSSCEEEEEECSSSSEEEE
T ss_pred             CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeec--cCCcEEEEEEeCCCCEEEE
Confidence            455677778777 6888888865  4789999999999998754321111 12233333  348999999974  57888


Q ss_pred             EeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--C-EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         78 GYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--D-GVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~-~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |++ +.|++||.++++..++|.+|..   .|.++.+.+  + ..+++++.|+.|++||.++.++++.+.
T Consensus       172 ~s~D~~v~lwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~  237 (354)
T 2pbi_B          172 ASGDGTCALWDVESGQLLQSFHGHGA---DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE  237 (354)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSS---CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             EeCCCcEEEEeCCCCeEEEEEcCCCC---CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence            875 6899999999999999999975   899988864  2 468899999999999999998887764

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.26  E-value=3.6e-10  Score=87.20  Aligned_cols=133  Identities=12%  Similarity=0.109  Sum_probs=104.0

Q ss_pred             CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-C
Q psy16020          6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-N   81 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n   81 (151)
                      .++++.++.+..|.++.+.++.+++|..+|.|.+|+....+    ..+..........+|+++.+..   +.+.+|+. +
T Consensus       141 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg  216 (342)
T 1yfq_A          141 NLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE----DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG  216 (342)
T ss_dssp             ESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCT----TCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred             CCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccc----cccceeeecCCCCceeEEEECCCCCCEEEEEecCC
Confidence            45667777889999999999999999999999999986312    1212222333358999999974   56888775 6


Q ss_pred             eEEEEeCCCC------cEEEEEEecCCC------CCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         82 KIHVVDPKSL------VVLKSFDAHPRR------ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 ~I~vid~~t~------~i~~~~~~h~~~------~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|++||.++.      +....+..|...      ...|.++.+++++ .+++++.|+.|++||..+.+++..+.
T Consensus       217 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  290 (342)
T 1yfq_A          217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA  290 (342)
T ss_dssp             EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred             cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence            8999998876      888899988531      2389999998755 37899999999999999999988875

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.26  E-value=5.1e-10  Score=88.85  Aligned_cols=122  Identities=17%  Similarity=0.173  Sum_probs=94.2

Q ss_pred             eeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEEEEeC-C
Q psy16020         10 PLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYK-N   81 (151)
Q Consensus        10 ~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw~g~~-n   81 (151)
                      ..+..+ +.|.++.+.++  ++++|..||+|.+|+...+     +.  ...+..+..+|.|+.+..    +.|+.|+. +
T Consensus       148 ~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-----~~--~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg  220 (354)
T 2pbi_B          148 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-----QL--LQSFHGHGADVLCLDLAPSETGNTFVSGGCDK  220 (354)
T ss_dssp             EEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-----CE--EEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred             eeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-----eE--EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence            334333 67888888654  7999999999999987532     11  223333458999998852    57888874 6


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +|++||.++++..+++++|+.   .|+++.+++++ .+++++.|++|++||.++.+.+..+
T Consensus       221 ~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~  278 (354)
T 2pbi_B          221 KAMVWDMRSGQCVQAFETHES---DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY  278 (354)
T ss_dssp             CEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             eEEEEECCCCcEEEEecCCCC---CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence            899999999999999999975   89999998654 5889999999999999987766554

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.26  E-value=2.3e-10  Score=88.12  Aligned_cols=122  Identities=11%  Similarity=0.105  Sum_probs=88.6

Q ss_pred             CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEE-
Q psy16020          4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCG-   78 (151)
Q Consensus         4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g-   78 (151)
                      ...+++..+.- .++|.+|.+.+  +.+++|..||+|.+|+...        .+.+..-....+|+++.+.. +.+.++ 
T Consensus       203 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~  274 (340)
T 4aow_A          203 ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE--------GKHLYTLDGGDIINALCFSPNRYWLCAA  274 (340)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT--------TEEEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred             CCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc--------CceeeeecCCceEEeeecCCCCceeecc
Confidence            34455555553 37899999875  4688899999999998752        22222111237899999975 344444 


Q ss_pred             eCCeEEEEeCCCCcEEEEEE---------ecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         79 YKNKIHVVDPKSLVVLKSFD---------AHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        79 ~~n~I~vid~~t~~i~~~~~---------~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                      .++.|++||.++++...++.         +|.   ..|+++++++++ .+++++.|+.|++||++|++
T Consensus       275 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          275 TGPSIKIWDLEGKIIVDELKQEVISTSSKAEP---PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             ETTEEEEEETTTTEEEEEECCC-------CCC---CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             CCCEEEEEECCCCeEEEeccccceeeeccCCC---CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            46899999999998877765         343   489999999775 48899999999999999876

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.26  E-value=1e-09  Score=86.64  Aligned_cols=128  Identities=7%  Similarity=0.015  Sum_probs=98.0

Q ss_pred             CCceeeeee---CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC--CEE
Q psy16020          5 HPTPYPLNK---ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY--NKV   75 (151)
Q Consensus         5 ~~~~l~~i~---l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~--~~L   75 (151)
                      +.+....++   ..+.|.++.+.+   +.+++|..||.|.+|+...      .....+.-. ....+|+++.+..  +.|
T Consensus       105 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l  178 (383)
T 3ei3_B          105 VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG------SVIQVFAKTDSWDYWYCCVDVSVSRQML  178 (383)
T ss_dssp             STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS------CEEEEEECCCCSSCCEEEEEEETTTTEE
T ss_pred             CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC------CceEEEeccCCCCCCeEEEEECCCCCEE
Confidence            345555555   347999999977   4789999999999998752      122222222 2237899999974  678


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc----cceeeeEe
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT----YQHLQDVD  142 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t----~~~l~~id  142 (151)
                      .+|+. +.|++||. +++...++.+|..   .|.++.+++++  ++++++.|+.|++||.++    .+++..+.
T Consensus       179 ~~~~~d~~i~i~d~-~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~  248 (383)
T 3ei3_B          179 ATGDSTGRLLLLGL-DGHEIFKEKLHKA---KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP  248 (383)
T ss_dssp             EEEETTSEEEEEET-TSCEEEEEECSSS---CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE
T ss_pred             EEECCCCCEEEEEC-CCCEEEEeccCCC---cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec
Confidence            88885 68999999 6888899999975   89999999776  789999999999999998    56666554

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.25  E-value=1.3e-09  Score=85.66  Aligned_cols=125  Identities=19%  Similarity=0.158  Sum_probs=97.4

Q ss_pred             eeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CC
Q psy16020          8 PYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KN   81 (151)
Q Consensus         8 ~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n   81 (151)
                      +...++= .++|.++.+.++  .++.|..||+|.+|+....     .....++...  .+|.++.+..  +.|.+|+ ++
T Consensus        47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-----~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~  119 (340)
T 1got_B           47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-----NKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDN  119 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-----CEEEEEECSS--SCEEEEEECTTSSEEEEEETTC
T ss_pred             hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-----CcceEeecCC--ccEEEEEECCCCCEEEEEeCCC
Confidence            3444543 379999999754  7999999999999986521     2333444444  8999999974  5677777 46


Q ss_pred             eEEEEeCCCC----cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         82 KIHVVDPKSL----VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 ~I~vid~~t~----~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|++||..+.    +..+.+.+|+.   .|.++.+.+++..++++.|+.|++||.++.+++..+.
T Consensus       120 ~v~iw~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~  181 (340)
T 1got_B          120 ICSIYNLKTREGNVRVSRELAGHTG---YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT  181 (340)
T ss_dssp             EEEEEETTTCSBSCEEEEEEECCSS---CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             eEEEEECccCCCcceeEEEecCCCc---cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEc
Confidence            8999998875    47788889975   8999999888889999999999999999998887763

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.25  E-value=4.6e-10  Score=90.18  Aligned_cols=134  Identities=8%  Similarity=0.042  Sum_probs=102.4

Q ss_pred             CCCCceeeeeeC---CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----C-
Q psy16020          3 YPHPTPYPLNKI---LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----Y-   72 (151)
Q Consensus         3 ~~~~~~l~~i~l---~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~-   72 (151)
                      ..+.++++.++.   .+.|.++.+.+  +.+++|..||+|.+|+...+     +....+.++. ..+|+++...    . 
T Consensus       199 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~-~~~v~~~~~~~~~s~~  272 (437)
T 3gre_A          199 IRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN-----VLIRSWSFGD-HAPITHVEVCQFYGKN  272 (437)
T ss_dssp             TTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT-----EEEEEEBCTT-CEEEEEEEECTTTCTT
T ss_pred             CCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc-----cEEEEEecCC-CCceEEEEeccccCCC
Confidence            345678888876   37999999964  46999999999999987521     1222333343 4799999654    2 


Q ss_pred             C-EEEEEeC-CeEEEEeCCCCcEEEEEEecCC-----------------------CCCceeEEEEeCCEEEEEEcCCCeE
Q psy16020         73 N-KVWCGYK-NKIHVVDPKSLVVLKSFDAHPR-----------------------RESQVRQMTWAGDGVWVSIRLDSTL  127 (151)
Q Consensus        73 ~-~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~-----------------------~~~~I~~m~~~~~~vwis~~~d~~l  127 (151)
                      + .|.+|+. +.|++||.++++..+++.+|..                       ....|.++.+++...+++++.|+.|
T Consensus       273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i  352 (437)
T 3gre_A          273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSI  352 (437)
T ss_dssp             EEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEE
T ss_pred             ccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeE
Confidence            2 4666765 5799999999999999997742                       2235889999977789999999999


Q ss_pred             EEEeCCccceeeeEe
Q psy16020        128 RMYNAHTYQHLQDVD  142 (151)
Q Consensus       128 ~lwd~~t~~~l~~id  142 (151)
                      ++||..+.+.++.+.
T Consensus       353 ~~wd~~~~~~~~~~~  367 (437)
T 3gre_A          353 VMFSLNELSSSKAVI  367 (437)
T ss_dssp             EEEETTCGGGCEEEE
T ss_pred             EEEECCCcccceEEe
Confidence            999999999888774

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.23  E-value=1.7e-10  Score=89.29  Aligned_cols=116  Identities=11%  Similarity=0.114  Sum_probs=91.8

Q ss_pred             CceeeeEEeCC------eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-CeEEE
Q psy16020         16 DTALPPVHVQG------RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHV   85 (151)
Q Consensus        16 ~~V~~i~~~~~------~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n~I~v   85 (151)
                      ..|.++.+.++      .+++|..||.|.+|+....     +....  +..+..+|+++.+..   +.|.+|+. +.|++
T Consensus        70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-----~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i  142 (366)
T 3k26_A           70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM-----QCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDHALRL  142 (366)
T ss_dssp             CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC-----CEEEE--EESCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred             CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc-----eEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence            67999999765      6999999999999986521     22223  333459999999964   56888774 68999


Q ss_pred             EeCCCCcEEEEE---EecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         86 VDPKSLVVLKSF---DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        86 id~~t~~i~~~~---~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ||.++++....+   ..|.   ..|.++.+++++ .+++++.|+.|++||.++.+.++.+
T Consensus       143 wd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  199 (366)
T 3k26_A          143 WNIQTDTLVAIFGGVEGHR---DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI  199 (366)
T ss_dssp             EETTTTEEEEEECSTTSCS---SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred             EEeecCeEEEEeccccccc---CceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence            999999999998   5665   489999998665 5889999999999999988766544

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.23  E-value=6.1e-10  Score=87.66  Aligned_cols=130  Identities=12%  Similarity=0.155  Sum_probs=102.4

Q ss_pred             CCCceeeeeeCCC-c---------------eeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceE
Q psy16020          4 PHPTPYPLNKILD-T---------------ALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR   66 (151)
Q Consensus         4 ~~~~~l~~i~l~~-~---------------V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~   66 (151)
                      .+.+++..++.+. .               +.++.+. ++.+++|..+|.|.+|+....     +....  +..+..+|+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~-----~~~~~--~~~~~~~i~  251 (425)
T 1r5m_A          179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK-----TPTGK--LIGHHGPIS  251 (425)
T ss_dssp             TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS-----SCSEE--ECCCSSCEE
T ss_pred             CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC-----ceeee--eccCCCceE
Confidence            3455666666663 3               8888775 557999999999999998632     12223  333458999


Q ss_pred             EEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         67 SLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        67 ~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      ++.+..  +.|.+|+. +.|++||.++++....+..|..   .|.++.+++++.+++++.|+.|++||.++.+.+..+..
T Consensus       252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  328 (425)
T 1r5m_A          252 VLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ---SIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV  328 (425)
T ss_dssp             EEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS---CEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             EEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc---cEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc
Confidence            999974  56888884 6899999999999999988864   89999999888899999999999999999998888764

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.23  E-value=5e-10  Score=87.45  Aligned_cols=124  Identities=12%  Similarity=0.044  Sum_probs=93.4

Q ss_pred             eeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcc-eEEEeCCCCCceEEEeeeC--CEEEEEeC-C
Q psy16020         10 PLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKY-HTVTLGLPHHSVRSLAAVY--NKVWCGYK-N   81 (151)
Q Consensus        10 ~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~-~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n   81 (151)
                      ..++=+ ++|.+|.+.+   +.++.|..||+|.+|+...+..   ... ....+..+..+|+++.+..  +.|..|+. +
T Consensus        11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~   87 (319)
T 3frx_A           11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK   87 (319)
T ss_dssp             EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence            344433 7999999874   4699999999999998752211   111 1223444569999999974  56777774 6


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeee
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      .|++||.++++..+++.+|..   .|.++.+++++ .++|++.|+.|++||.+. +.+..
T Consensus        88 ~v~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~  143 (319)
T 3frx_A           88 TLRLWDVATGETYQRFVGHKS---DVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLAT  143 (319)
T ss_dssp             EEEEEETTTTEEEEEEECCSS---CEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEE
T ss_pred             EEEEEECCCCCeeEEEccCCC---cEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEE
Confidence            899999999999999999975   89999998665 588999999999999874 34433

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.22  E-value=1e-09  Score=88.08  Aligned_cols=134  Identities=15%  Similarity=0.124  Sum_probs=94.6

Q ss_pred             eeeeCCCceeeeEEeC-CeEEEEecCCcEEEEEcCCCCC-CCCC-------cceEEEeC---CCCCceEEEeeeC--CEE
Q psy16020         10 PLNKILDTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQ-WDLS-------KYHTVTLG---LPHHSVRSLAAVY--NKV   75 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~-wd~~-------~~~~i~l~---~~~~pV~~m~~v~--~~L   75 (151)
                      +.+..++.|.|+.+.+ ++.++..+++++.+|+...+.. ..+.       .+..+...   .....|+++.+..  +.|
T Consensus        59 ~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l  138 (393)
T 1erj_A           59 KSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL  138 (393)
T ss_dssp             EEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred             EecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence            3345668999999975 3555666699999998753210 0000       00000000   1113599999973  567


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      ..|+. +.|++||.++++..+.+.+|..   .|.++.+++++ .+++++.|+.|++||.++.+....+.....
T Consensus       139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~  208 (393)
T 1erj_A          139 ATGAEDRLIRIWDIENRKIVMILQGHEQ---DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG  208 (393)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred             EEEcCCCeEEEEECCCCcEEEEEccCCC---CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCC
Confidence            77775 6899999999999999999975   89999998664 488999999999999999988877765443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.21  E-value=2.1e-09  Score=82.17  Aligned_cols=129  Identities=11%  Similarity=0.090  Sum_probs=96.6

Q ss_pred             eeeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-Ce
Q psy16020          8 PYPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NK   82 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~   82 (151)
                      .+.....+++|.++.+.++  .+++|. ||.|.+|+....+.  ......+....+..+|+++.+..  +.|.+|+. +.
T Consensus        44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  120 (337)
T 1gxr_A           44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST  120 (337)
T ss_dssp             EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC--CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred             cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc--eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence            3444556689999998754  455555 99999999865432  12334444434569999999984  56888875 68


Q ss_pred             EEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         83 IHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        83 I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |++||.++++  ....+..|..   .|.++.+++++ .+++++.|+.|++||.++.+.+..+.
T Consensus       121 i~~~d~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~  180 (337)
T 1gxr_A          121 LSIWDLAAPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ  180 (337)
T ss_dssp             EEEEECCCC--EEEEEEECSSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEEECCCCCcceeeecccCCC---ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee
Confidence            9999999988  6677777764   89999998664 57889999999999999998888774

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.21  E-value=2.6e-09  Score=84.89  Aligned_cols=132  Identities=8%  Similarity=0.080  Sum_probs=100.7

Q ss_pred             CCCceeeeee-CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          4 PHPTPYPLNK-ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~-l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      .+.+++..++ .+++|.++.+.++  .+++|..||+|.+|+....     +....+.  .+..+|+++.+..  +.|..|
T Consensus       127 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~~~~~~~--~h~~~v~~~~~~~~~~~l~s~  199 (420)
T 3vl1_A          127 NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----SNPRTLI--GHRATVTDIAIIDRGRNVLSA  199 (420)
T ss_dssp             TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CCCEEEE--CCSSCEEEEEEETTTTEEEEE
T ss_pred             CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----cCceEEc--CCCCcEEEEEEcCCCCEEEEE
Confidence            3445555553 4479999999754  7999999999999998632     2233333  3459999999974  568887


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe---------------------CC-EEEEEEcCCCeEEEEeCCcc
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA---------------------GD-GVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~---------------------~~-~vwis~~~d~~l~lwd~~t~  135 (151)
                      +. +.|++||.++++..+++..|......|.++.+.                     ++ ...++++.|+.|++||.++.
T Consensus       200 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~  279 (420)
T 3vl1_A          200 SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK  279 (420)
T ss_dssp             ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred             cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence            75 689999999999999999876655677777763                     33 35789999999999999999


Q ss_pred             ceeeeEe
Q psy16020        136 QHLQDVD  142 (151)
Q Consensus       136 ~~l~~id  142 (151)
                      +.+..+.
T Consensus       280 ~~~~~~~  286 (420)
T 3vl1_A          280 EQTIQLP  286 (420)
T ss_dssp             CEEEEEC
T ss_pred             ceeEEcc
Confidence            8887774

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.21  E-value=5.3e-10  Score=89.32  Aligned_cols=127  Identities=14%  Similarity=0.113  Sum_probs=89.0

Q ss_pred             CCCceeeeeeCCCceeeeEEeCC-eEEEEecCCcEEEEEcCCC---------------------------------C---
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQG-RVVCALADGSVAIFRRGPD---------------------------------G---   46 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~---------------------------------~---   46 (151)
                      .+.+++..++.+..|.++.+.++ +.++..+++.+.+|....+                                 +   
T Consensus       165 ~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~  244 (365)
T 4h5i_A          165 SDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG  244 (365)
T ss_dssp             TTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred             CCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence            45566677776777888887643 4555555666666644311                                 0   


Q ss_pred             ----CCCCCcce-----EEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEE-EecCCCCCceeEEEEe
Q psy16020         47 ----QWDLSKYH-----TVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSF-DAHPRRESQVRQMTWA  113 (151)
Q Consensus        47 ----~wd~~~~~-----~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~-~~h~~~~~~I~~m~~~  113 (151)
                          .|+.....     ...+..+..+|+||++..  ..|..|+. +.|++||+++++..+++ ++|+.   .|++++++
T Consensus       245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~---~V~~v~fS  321 (365)
T 4h5i_A          245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSF---AITEVTIS  321 (365)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSS---CEEEEEEC
T ss_pred             eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccC---CEEEEEEC
Confidence                12221111     112333458999999974  45777875 68999999999999986 68975   89999999


Q ss_pred             CCEE-EEEEcCCCeEEEEeCC
Q psy16020        114 GDGV-WVSIRLDSTLRMYNAH  133 (151)
Q Consensus       114 ~~~v-wis~~~d~~l~lwd~~  133 (151)
                      ++|- ++|++.|++||+||..
T Consensus       322 pdg~~laS~S~D~tvrvw~ip  342 (365)
T 4h5i_A          322 PDSTYVASVSAANTIHIIKLP  342 (365)
T ss_dssp             TTSCEEEEEETTSEEEEEECC
T ss_pred             CCCCEEEEEeCCCeEEEEEcC
Confidence            8875 8899999999999985

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.21  E-value=6e-10  Score=86.62  Aligned_cols=124  Identities=11%  Similarity=0.053  Sum_probs=93.1

Q ss_pred             eeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEeC
Q psy16020          8 PYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK   80 (151)
Q Consensus         8 ~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~~   80 (151)
                      ++..++- .++|.+|.+.+  +++++|..||.|.+|+....     .......+..+..+|+++.+.    ++.|..|+.
T Consensus         3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~   77 (379)
T 3jrp_A            3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY   77 (379)
T ss_dssp             --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred             ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-----cceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence            3444543 47999999874  46888889999999987421     111223455556999999996    467888875


Q ss_pred             -CeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccceee
Q psy16020         81 -NKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        81 -n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                       +.|++||.++++  ....+..|..   .|.++.++++   ..+++++.|+.|++||.++.+...
T Consensus        78 dg~v~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~  139 (379)
T 3jrp_A           78 DGKVLIWKEENGRWSQIAVHAVHSA---SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS  139 (379)
T ss_dssp             TSCEEEEEEETTEEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred             CCEEEEEEcCCCceeEeeeecCCCc---ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence             689999999997  6677777764   8999999975   468899999999999999874433

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.21  E-value=6.2e-10  Score=90.57  Aligned_cols=134  Identities=10%  Similarity=0.033  Sum_probs=100.2

Q ss_pred             CCceeeee---eCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC-----E
Q psy16020          5 HPTPYPLN---KILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-----K   74 (151)
Q Consensus         5 ~~~~l~~i---~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~-----~   74 (151)
                      +.+++..+   ..+..|.++.+.++  .+++|..+|.+.+|+......-. .....+.  .+..+|+++.+..+     .
T Consensus       136 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-~~~~~~~--~h~~~v~~~~~sp~~~~~~~  212 (450)
T 2vdu_B          136 SKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK-FTQEPIL--GHVSMLTDVHLIKDSDGHQF  212 (450)
T ss_dssp             SSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS-CCCCCSE--ECSSCEEEEEEEECTTSCEE
T ss_pred             CCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc-ccceeee--cccCceEEEEEcCCCCCCcE
Confidence            45667776   46689999999754  79999999999999875322110 0111122  23489999999754     5


Q ss_pred             EEEEeC-CeEEEEeCCCCcEEEE-EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         75 VWCGYK-NKIHVVDPKSLVVLKS-FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        75 Lw~g~~-n~I~vid~~t~~i~~~-~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      |..|+. +.|++||..+++..++ +.+|..   .|.++.++....+++++.|+.|++||.+++++++.+...
T Consensus       213 l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~---~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~  281 (450)
T 2vdu_B          213 IITSDRDEHIKISHYPQCFIVDKWLFGHKH---FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN  281 (450)
T ss_dssp             EEEEETTSCEEEEEESCTTCEEEECCCCSS---CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred             EEEEcCCCcEEEEECCCCceeeeeecCCCC---ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence            777774 6899999999998887 447864   899999983345889999999999999999999998754

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.21  E-value=4.3e-10  Score=89.43  Aligned_cols=108  Identities=12%  Similarity=0.165  Sum_probs=88.9

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~~~~h  100 (151)
                      ++.+.+|..||.|.+|+..        ....+.. ..+..+|+++.+..  +.|..|+. +.|++||.++++..+++.+|
T Consensus       109 ~~~l~~~~~dg~i~iwd~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h  180 (420)
T 3vl1_A          109 MRRFILGTTEGDIKVLDSN--------FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH  180 (420)
T ss_dssp             SCEEEEEETTSCEEEECTT--------SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred             CCEEEEEECCCCEEEEeCC--------CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence            4578999999999999754        2233333 34569999999974  56888875 68999999999999999999


Q ss_pred             CCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        101 PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       101 ~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      ..   .|.++.+++++ .+++++.|+.|++||.++.+.++.+..
T Consensus       181 ~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~  221 (420)
T 3vl1_A          181 RA---TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR  221 (420)
T ss_dssp             SS---CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB
T ss_pred             CC---cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec
Confidence            75   89999999664 478999999999999999999998863

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.21  E-value=1.3e-09  Score=83.12  Aligned_cols=119  Identities=17%  Similarity=0.252  Sum_probs=84.3

Q ss_pred             CceeeeEEe--CCeEEEEecCCcEEEEEcCCCC-----------------------------------------CCCCCc
Q psy16020         16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDG-----------------------------------------QWDLSK   52 (151)
Q Consensus        16 ~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~-----------------------------------------~wd~~~   52 (151)
                      +.+.++.+.  ++.++.|..||+|.+|+...+.                                         .||...
T Consensus       151 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~  230 (318)
T 4ggc_A          151 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS  230 (318)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred             CceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence            566666654  3468888889999999764210                                         122222


Q ss_pred             ceEEEeCCCCCceEEEeee--CCEEEEEeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCe
Q psy16020         53 YHTVTLGLPHHSVRSLAAV--YNKVWCGYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDST  126 (151)
Q Consensus        53 ~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~  126 (151)
                      ...........++.++.+.  ++.+.++++   +.|++||.++++..+++.+|++   .|++|++++++ .++|++.|++
T Consensus       231 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~---~V~~l~~spdg~~l~S~s~D~~  307 (318)
T 4ggc_A          231 GACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS---RVLSLTMSPDGATVASAAADET  307 (318)
T ss_dssp             CCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTTE
T ss_pred             ccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEecCCe
Confidence            1111111123566777775  367777653   6899999999999999999975   89999999765 4889999999


Q ss_pred             EEEEeCCccce
Q psy16020        127 LRMYNAHTYQH  137 (151)
Q Consensus       127 l~lwd~~t~~~  137 (151)
                      |++||..+.+|
T Consensus       308 v~iWd~~~~dP  318 (318)
T 4ggc_A          308 LRLWRCFELDP  318 (318)
T ss_dssp             EEEECCSCCCC
T ss_pred             EEEEECCCCCC
Confidence            99999987653

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.20  E-value=3.3e-09  Score=81.93  Aligned_cols=142  Identities=15%  Similarity=0.117  Sum_probs=106.9

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCC--eEEEEecC-----CcEEEEEcCCCCCC------CCCcceEEEeCCCCCceEEEe
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQG--RVVCALAD-----GSVAIFRRGPDGQW------DLSKYHTVTLGLPHHSVRSLA   69 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~--~v~vgl~n-----G~l~v~~~~~~~~w------d~~~~~~i~l~~~~~pV~~m~   69 (151)
                      ..+.+++..++.+.+|.++.+.++  .++++..+     |.|.+|+......-      .......+.......+++++.
T Consensus       103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (369)
T 3zwl_B          103 VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG  182 (369)
T ss_dssp             TTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred             CCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence            456788888998899999999754  68888888     99999998643210      001112222222123899999


Q ss_pred             eeC--CEEEEEeC-CeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         70 AVY--NKVWCGYK-NKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        70 ~v~--~~Lw~g~~-n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +..  +.|.+|+. +.|++||..+ .+..+.+..|..   .|.++.+++++ .+++++.|+.|++||.++.+.+..+...
T Consensus       183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~  259 (369)
T 3zwl_B          183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK---SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD  259 (369)
T ss_dssp             ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred             EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC---ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC
Confidence            863  57888875 6899999999 889999999864   89999998665 4778899999999999999999888754


Q ss_pred             ccc
Q psy16020        145 PYV  147 (151)
Q Consensus       145 ~~v  147 (151)
                      ..+
T Consensus       260 ~~~  262 (369)
T 3zwl_B          260 CPL  262 (369)
T ss_dssp             SCE
T ss_pred             CCc
Confidence            433

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.20  E-value=5.7e-10  Score=86.22  Aligned_cols=130  Identities=10%  Similarity=0.130  Sum_probs=92.7

Q ss_pred             CCCceeeeeeCCCceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCC---EE
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN---KV   75 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~-----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~---~L   75 (151)
                      .+.++......+..|.++.+.+     +.+++|..||.|.+|+......  ........+..+..+|+++.+..+   .+
T Consensus       198 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  275 (357)
T 3i2n_A          198 RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP--TKGFASVSEKAHKSTVWQVRHLPQNRELF  275 (357)
T ss_dssp             TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET--TTEEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred             ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc--ccceeeeccCCCcCCEEEEEECCCCCcEE
Confidence            3455666667788999999975     6799999999999998753211  111111122234599999999863   36


Q ss_pred             EEEeC-CeEEEEeCCCC-------------------cEEEEEEecCCCCCceeEEEEeCCEE-EE-EEcCCCeEEEEeCC
Q psy16020         76 WCGYK-NKIHVVDPKSL-------------------VVLKSFDAHPRRESQVRQMTWAGDGV-WV-SIRLDSTLRMYNAH  133 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~-------------------~i~~~~~~h~~~~~~I~~m~~~~~~v-wi-s~~~d~~l~lwd~~  133 (151)
                      .+|+. +.|++||.++.                   +...++.+|..   .|.++.+++++- ++ |++.|+.|++||..
T Consensus       276 ~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~  352 (357)
T 3i2n_A          276 LTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ---PISSLDWSPDKRGLCVCSSFDQTVRVLIVT  352 (357)
T ss_dssp             EEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS---CEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred             EEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC---CeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence            66664 68999998753                   56778888864   899999997764 44 89999999999999


Q ss_pred             cccee
Q psy16020        134 TYQHL  138 (151)
Q Consensus       134 t~~~l  138 (151)
                      +++.+
T Consensus       353 ~~~~i  357 (357)
T 3i2n_A          353 KLNKI  357 (357)
T ss_dssp             C----
T ss_pred             CcccC
Confidence            87653

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.20  E-value=9.8e-10  Score=84.86  Aligned_cols=120  Identities=15%  Similarity=0.169  Sum_probs=90.7

Q ss_pred             eeeeeeCC-CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----------
Q psy16020          8 PYPLNKIL-DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----------   72 (151)
Q Consensus         8 ~l~~i~l~-~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----------   72 (151)
                      ++..++.+ ++|.++.+.+    +.+.+|..||+|.+|+....+.+   .+.  .+..+..+|+++.+..          
T Consensus        91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~---~~~--~~~~h~~~v~~~~~~p~~~~~~~~~~  165 (297)
T 2pm7_B           91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT---SPI--IIDAHAIGVNSASWAPATIEEDGEHN  165 (297)
T ss_dssp             CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB---CCE--EEECCSSCEEEEEECCCC--------
T ss_pred             EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce---eee--eeecccCccceEeecCCcccccccCC
Confidence            33444433 6899999875    47889999999999998643322   122  2333348899998864          


Q ss_pred             -----CEEEEEeC-CeEEEEeCCCCc----EEEEEEecCCCCCceeEEEEeCC----EEEEEEcCCCeEEEEeCCcc
Q psy16020         73 -----NKVWCGYK-NKIHVVDPKSLV----VLKSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        73 -----~~Lw~g~~-n~I~vid~~t~~----i~~~~~~h~~~~~~I~~m~~~~~----~vwis~~~d~~l~lwd~~t~  135 (151)
                           ..|..|+. ++|++||.++.+    ..+++.+|++   .|.++.++++    ..++|++.|++|++||.++.
T Consensus       166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~---~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~  239 (297)
T 2pm7_B          166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD---WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE  239 (297)
T ss_dssp             ----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS---CEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred             CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC---ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence                 36777774 689999988766    7788999975   8999999986    57899999999999998864

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.20  E-value=7.2e-10  Score=91.78  Aligned_cols=128  Identities=13%  Similarity=0.101  Sum_probs=103.2

Q ss_pred             CCceeeeeeCCCceeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020          5 HPTPYPLNKILDTALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-   80 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-   80 (151)
                      ..+++..++.+.++.++.+.++.+++|.. ||.|.+|+....      ......+..+..+|+++.+..  ..|.+|+. 
T Consensus       436 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d  509 (615)
T 1pgu_A          436 TGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL------EVSFDLKTPLRAKPSYISISPSETYIAAGDVM  509 (615)
T ss_dssp             TCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE------EEEEECSSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCc------cccccccCCccCceEEEEECCCCCEEEEcCCC
Confidence            56788888888999999999888999998 999999987521      000033444568999999963  56888875 


Q ss_pred             CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeC----------C-EEEEEEcCCCeEEEEeCCcc-ceeeeE
Q psy16020         81 NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAG----------D-GVWVSIRLDSTLRMYNAHTY-QHLQDV  141 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~----------~-~vwis~~~d~~l~lwd~~t~-~~l~~i  141 (151)
                      +.|++||.++++..+++.+ |..   .|+++.+++          + ..+++++.|+.|++||..+. ++++.+
T Consensus       510 g~i~iw~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  580 (615)
T 1pgu_A          510 GKILLYDLQSREVKTSRWAFRTS---KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL  580 (615)
T ss_dssp             SCEEEEETTTTEEEECCSCCCSS---CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET
T ss_pred             CeEEEeeCCCCcceeEeecCCCC---ceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhh
Confidence            6899999999999999887 864   899999987          4 45889999999999999987 666654

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.20  E-value=1.3e-09  Score=92.40  Aligned_cols=119  Identities=21%  Similarity=0.228  Sum_probs=96.1

Q ss_pred             CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020         16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~   89 (151)
                      +.|.++.+.++   ++..|..||+|.+|+...       ......+..+..+|+++.+..  +.|..|+. +.|++||..
T Consensus       148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~  220 (611)
T 1nr0_A          148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV  220 (611)
T ss_dssp             SCEEEEEECSSSSCEEEEEETTSCEEEEETTT-------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CCceEEEECCCCCeEEEEEeCCCeEEEEECCC-------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence            68999999875   488999999999998531       112234566679999999974  45776774 689999999


Q ss_pred             CCcEEEEEE-------ecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         90 SLVVLKSFD-------AHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        90 t~~i~~~~~-------~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +++..+.+.       +|+.   .|.++.+++++ .++|++.|++|++||.++++.++.+...
T Consensus       221 ~g~~~~~~~~~~~~~~~h~~---~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~  280 (611)
T 1nr0_A          221 DGTKTGVFEDDSLKNVAHSG---SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG  280 (611)
T ss_dssp             TCCEEEECBCTTSSSCSSSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             CCcEeeeeccccccccccCC---CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence            999999985       6864   89999999775 4889999999999999999999888643

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.19  E-value=2.4e-09  Score=88.59  Aligned_cols=124  Identities=19%  Similarity=0.206  Sum_probs=96.1

Q ss_pred             CceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK   80 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~   80 (151)
                      .+.++.++-+ ++|.++.+.++  .+.+|..||+|.+|+..  +      .....+..+..+|++|.+..  ..|..|+.
T Consensus       416 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~------~~~~~~~~~~~~v~~~~~spd~~~las~~~  487 (577)
T 2ymu_A          416 GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--G------QLLQTLTGHSSSVRGVAFSPDGQTIASASD  487 (577)
T ss_dssp             CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--S------CEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred             CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--C------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence            4566666644 79999998753  68889999999999853  1      12223334459999999974  45777775


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       +.|++||. +++..+++.+|..   .|+++++++++- +++++.|+.|++||. ++++++.+.
T Consensus       488 d~~i~iw~~-~~~~~~~~~~h~~---~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~  546 (577)
T 2ymu_A          488 DKTVKLWNR-NGQLLQTLTGHSS---SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT  546 (577)
T ss_dssp             TSEEEEEET-TSCEEEEEECCSS---CEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred             CCEEEEEcC-CCCEEEEEeCCCC---CEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence             58999994 7899999999975   899999997765 789999999999995 578777764

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.18  E-value=2.2e-09  Score=81.63  Aligned_cols=133  Identities=15%  Similarity=0.210  Sum_probs=95.9

Q ss_pred             ceeeeeeC-CCceeeeEEeC----CeEEEEecCCcEEEEEcCCCC---CCC-----------------------------
Q psy16020          7 TPYPLNKI-LDTALPPVHVQ----GRVVCALADGSVAIFRRGPDG---QWD-----------------------------   49 (151)
Q Consensus         7 ~~l~~i~l-~~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~---~wd-----------------------------   49 (151)
                      +++..++- +++|.++.+.+    +.+++|..||.|.+|+.....   .|.                             
T Consensus       101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  180 (351)
T 3f3f_A          101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF  180 (351)
T ss_dssp             EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS
T ss_pred             ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC
Confidence            45666654 37999999975    469999999999999965321   010                             


Q ss_pred             ------------------CCcc---eEEEeCCCCCceEEEeeeCC-----E-EEEEeC-CeEEEEeCCCC----------
Q psy16020         50 ------------------LSKY---HTVTLGLPHHSVRSLAAVYN-----K-VWCGYK-NKIHVVDPKSL----------   91 (151)
Q Consensus        50 ------------------~~~~---~~i~l~~~~~pV~~m~~v~~-----~-Lw~g~~-n~I~vid~~t~----------   91 (151)
                                        ....   ....+..+..+|+++.+..+     + |..|+. +.|++||..+.          
T Consensus       181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  260 (351)
T 3f3f_A          181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL  260 (351)
T ss_dssp             SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred             CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence                              0000   12234445689999999754     4 666664 68999998875          


Q ss_pred             ------------------------------------cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020         92 ------------------------------------VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        92 ------------------------------------~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t  134 (151)
                                                          +...++.+|..   .|+++.+++++ .+++++.|+.|++||..+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~  337 (351)
T 3f3f_A          261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG---EVWSVSWNLTGTILSSAGDDGKVRLWKATY  337 (351)
T ss_dssp             ------------------------------CCSEEEEEEEEECTTSS---CEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc---cEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence                                                66777788864   89999999765 488999999999999998


Q ss_pred             cceeeeEe
Q psy16020        135 YQHLQDVD  142 (151)
Q Consensus       135 ~~~l~~id  142 (151)
                      .+.++.+.
T Consensus       338 ~~~~~~~~  345 (351)
T 3f3f_A          338 SNEFKCMS  345 (351)
T ss_dssp             TSCEEEEE
T ss_pred             Ccchhhee
Confidence            76666553

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.18  E-value=1.6e-09  Score=87.03  Aligned_cols=133  Identities=7%  Similarity=0.050  Sum_probs=98.1

Q ss_pred             eeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcC--CCCCCC----CCcceEEEeCC--CCCceEEEeee----CC
Q psy16020          8 PYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRG--PDGQWD----LSKYHTVTLGL--PHHSVRSLAAV----YN   73 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~--~~~~wd----~~~~~~i~l~~--~~~pV~~m~~v----~~   73 (151)
                      +.......++|.++.+.+  +.+++|..||+|.+|+..  ..+.--    ......+.+..  ....+.|+...    ++
T Consensus       104 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (437)
T 3gre_A          104 SSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS  183 (437)
T ss_dssp             CSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred             eeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence            444556678999999976  469999999999999874  112100    00111222221  23677788754    45


Q ss_pred             EEEEEeC-CeEEEEeCCCCcEEEEEEe--cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         74 KVWCGYK-NKIHVVDPKSLVVLKSFDA--HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        74 ~Lw~g~~-n~I~vid~~t~~i~~~~~~--h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      .|.+|+. +.|++||.++++..+++.+  |..   .|+++.+++++- +++++.|+.|++||.++.++++.+.+
T Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  254 (437)
T 3gre_A          184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHG---AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF  254 (437)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCGGGC---CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred             EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC---ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec
Confidence            6777775 6999999999999999998  654   899999986654 78899999999999999999988754

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.18  E-value=9.9e-10  Score=86.55  Aligned_cols=120  Identities=14%  Similarity=0.133  Sum_probs=95.6

Q ss_pred             CCceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCC---CCceEEEeee--CCEEEEEeC----CeE
Q psy16020         15 LDTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLP---HHSVRSLAAV--YNKVWCGYK----NKI   83 (151)
Q Consensus        15 ~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~---~~pV~~m~~v--~~~Lw~g~~----n~I   83 (151)
                      ...|.++.+.++ .+++|..||.|.+|+....     +....+.. ..+   ..+|+++.+.  ++.|.+|+.    +.|
T Consensus       186 ~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i  260 (397)
T 1sq9_A          186 SQFATSVDISERGLIATGFNNGTVQISELSTL-----RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI  260 (397)
T ss_dssp             CCCCCEEEECTTSEEEEECTTSEEEEEETTTT-----EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEE
T ss_pred             CCCceEEEECCCceEEEEeCCCcEEEEECCCC-----ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceE
Confidence            478999998755 8888899999999987521     22223333 003   4899999996  466888875    589


Q ss_pred             EEEeCCCCcEEEEEEe-------------cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         84 HVVDPKSLVVLKSFDA-------------HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~-------------h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++||..+++...++.+             |..   .|.++.+++++ .+++++.|+.|++||.++.+++..+.
T Consensus       261 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  330 (397)
T 1sq9_A          261 TLYETEFGERIGSLSVPTHSSQASLGEFAHSS---WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN  330 (397)
T ss_dssp             EEEETTTCCEEEEECBC--------CCBSBSS---CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             EEEECCCCcccceeccCcccccccccccccCC---cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence            9999999999999998             764   89999998554 57899999999999999999999997

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.18  E-value=1.4e-09  Score=87.29  Aligned_cols=131  Identities=11%  Similarity=0.000  Sum_probs=97.6

Q ss_pred             CCCceeeeeeCCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEE-----eCCCCCceEEEeeeC--C
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVT-----LGLPHHSVRSLAAVY--N   73 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-----l~~~~~pV~~m~~v~--~   73 (151)
                      .+.++...+...+.+.++.+.+   +.+.+|..||+|.+|+...+.     ....+.     ...+..+|+++.+..  .
T Consensus       195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~v~~~~~g~  269 (393)
T 1erj_A          195 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-----LVERLDSENESGTGHKDSVYSVVFTRDGQ  269 (393)
T ss_dssp             TTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-----EEEEEC------CCCSSCEEEEEECTTSS
T ss_pred             CCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----EEEeecccccCCCCCCCCEEEEEECCCCC
Confidence            4566777788888999998864   468889999999999875321     111111     123458999999973  5


Q ss_pred             EEEEEe-CCeEEEEeCCC------------CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020         74 KVWCGY-KNKIHVVDPKS------------LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        74 ~Lw~g~-~n~I~vid~~t------------~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      .|..|+ ++.|++||.++            +.+..++.+|.+   .|.++.+++++ ..+|++.|+.|++||.++++++.
T Consensus       270 ~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~  346 (393)
T 1erj_A          270 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD---FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL  346 (393)
T ss_dssp             EEEEEETTSEEEEEEC---------------CEEEEEECCSS---CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred             EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC---cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence            688777 46899999875            345678888975   89999998665 47899999999999999999887


Q ss_pred             eEe
Q psy16020        140 DVD  142 (151)
Q Consensus       140 ~id  142 (151)
                      .+.
T Consensus       347 ~l~  349 (393)
T 1erj_A          347 MLQ  349 (393)
T ss_dssp             EEE
T ss_pred             EEC
Confidence            774

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.17  E-value=6.9e-10  Score=85.61  Aligned_cols=119  Identities=11%  Similarity=0.130  Sum_probs=91.9

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CC-EEEEEeC-CeEEEEeC-
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YN-KVWCGYK-NKIHVVDP-   88 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~-~Lw~g~~-n~I~vid~-   88 (151)
                      ++|.++.+.+  +.+++|..||.|.+|+.......  .....+.  .+..+|+++.+.  ++ .|++|+. +.|++||. 
T Consensus        12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~--~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~   87 (342)
T 1yfq_A           12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN--VDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI   87 (342)
T ss_dssp             SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE--EEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred             CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc--ccceeee--ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence            6899999874  47999999999999998632210  0112222  335899999997  45 7888885 68999999 


Q ss_pred             CCCcEEEEEEe--cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc---------cceeeeEe
Q psy16020         89 KSLVVLKSFDA--HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT---------YQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~--h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t---------~~~l~~id  142 (151)
                      ++++. ..+.+  |..   .|.++.+++...+++++.|+.|++||.++         .+++..+.
T Consensus        88 ~~~~~-~~~~~~~~~~---~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  148 (342)
T 1yfq_A           88 GSPSF-QALTNNEANL---GICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK  148 (342)
T ss_dssp             SSSSE-EECBSCCCCS---CEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred             cCCce-EeccccCCCC---ceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence            88876 67777  764   89999999766688999999999999998         77776664

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.17  E-value=1.6e-09  Score=85.01  Aligned_cols=124  Identities=10%  Similarity=0.152  Sum_probs=86.0

Q ss_pred             CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020         15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~   89 (151)
                      .++|.++.+.+  +.+.+|..||+|.+|+......-.........+..+..+|+++.+..  +.|..|+. +.|++||..
T Consensus        58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~  137 (330)
T 2hes_X           58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD  137 (330)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred             cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence            36899999875  46888999999999987422110011112234445569999999974  56777774 689999984


Q ss_pred             ----CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCcc--ceeeeE
Q psy16020         90 ----SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY--QHLQDV  141 (151)
Q Consensus        90 ----t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~--~~l~~i  141 (151)
                          ..+..+.+.+|..   .|.++.+++++ .++|++.|+.|++||..+.  ++++.+
T Consensus       138 ~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~  193 (330)
T 2hes_X          138 ESGEEYECISVLQEHSQ---DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL  193 (330)
T ss_dssp             TTCCCCEEEEEECCCSS---CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred             CCCCCeEEEEEeccCCC---ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence                2467788999975   89999998654 5899999999999998764  455544

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.15  E-value=1.4e-09  Score=93.17  Aligned_cols=132  Identities=11%  Similarity=0.051  Sum_probs=102.1

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC----CCCCceEEEeeeC----
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG----LPHHSVRSLAAVY----   72 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~----~~~~pV~~m~~v~----   72 (151)
                      .+.++++.+.-+ +.|.++.+++  ++++.|..||+|.+|+...        .....+.    .+..+|+|+.+..    
T Consensus       460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~--------~~~~~~~~~~~~h~~~v~~~~~~~~~~~  531 (694)
T 3dm0_A          460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG--------ECKYTISEGGEGHRDWVSCVRFSPNTLQ  531 (694)
T ss_dssp             TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS--------CEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred             CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC--------CcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence            445666666544 7999999875  4699999999999997531        1222221    2347899999974    


Q ss_pred             CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         73 NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        73 ~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      ..|..|+. +.|++||..+.+..+++.+|..   .|.++.+++++ .++|++.|+.|++||.++.+.+..+.....
T Consensus       532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~---~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~  604 (694)
T 3dm0_A          532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTG---YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV  604 (694)
T ss_dssp             CEEEEEETTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC
T ss_pred             ceEEEEeCCCeEEEEECCCCcEEEEEcCCCC---CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc
Confidence            35777774 6899999999999999999975   89999999765 478999999999999999998887754433

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.15  E-value=3.4e-09  Score=82.46  Aligned_cols=125  Identities=13%  Similarity=0.032  Sum_probs=96.3

Q ss_pred             CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020         14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~   88 (151)
                      ....|.++.+.+  +.+++|..||.|.+|+......|.  ....+ ...+..+|+++.+..  +.|.+|+. +.|++||.
T Consensus        95 ~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~--~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~  171 (372)
T 1k8k_C           95 INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW--VCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA  171 (372)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE--EEEEE-CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce--eeeee-ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence            346899999864  479999999999999886433221  11111 123358999999974  56888774 68999994


Q ss_pred             ------------------CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         89 ------------------KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        89 ------------------~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                                        .+++..+++.+|..   .|.++.+++++ .+++++.|+.|++||.++.+++..+...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  243 (372)
T 1k8k_C          172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCG---WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE  243 (372)
T ss_dssp             CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS---CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred             ccccccccccccccccccchhhheEecCCCCC---eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence                              47889999988864   89999998765 6889999999999999999999888643

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.15  E-value=2.4e-09  Score=84.23  Aligned_cols=122  Identities=15%  Similarity=0.076  Sum_probs=95.0

Q ss_pred             CCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK   80 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~   80 (151)
                      ..+.+..++-+ .+|.++.+.++  .+++|..||.|.+|+....     +....  +..+..+|+++.+.. +.+.+++.
T Consensus       236 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~  308 (425)
T 1r5m_A          236 EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-----NSQNC--FYGHSQSIVSASWVGDDKVISCSM  308 (425)
T ss_dssp             CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-----SCSEE--ECCCSSCEEEEEEETTTEEEEEET
T ss_pred             CCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----ccceE--ecCCCccEEEEEECCCCEEEEEeC
Confidence            34555566544 78999998743  6999999999999987531     12222  333458999999985 47777774


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                       +.|++||.++++....+..|..   .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus       309 d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~  363 (425)
T 1r5m_A          309 DGSVRLWSLKQNTLLALSIVDGV---PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN  363 (425)
T ss_dssp             TSEEEEEETTTTEEEEEEECTTC---CEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred             CCcEEEEECCCCcEeEecccCCc---cEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence             6899999999999999998864   89999999664 47788999999999999988

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.15  E-value=3.4e-09  Score=82.29  Aligned_cols=123  Identities=15%  Similarity=0.098  Sum_probs=92.4

Q ss_pred             CceeeeeeCC-CceeeeEEe----CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----CEEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVW   76 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~----~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----~~Lw   76 (151)
                      .+++..++-+ ++|.++.+.    ++.+++|..||.|.+|+...+ .    ......+..+..+|+++.+..    +.|.
T Consensus        45 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~  119 (379)
T 3jrp_A           45 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-R----WSQIAVHAVHSASVNSVQWAPHEYGPLLL  119 (379)
T ss_dssp             EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-E----EEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred             ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-c----eeEeeeecCCCcceEEEEeCCCCCCCEEE
Confidence            3455555533 799999986    568999999999999987531 1    112334444559999999974    4688


Q ss_pred             EEeC-CeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEeC--------------CEEEEEEcCCCeEEEEeCCccc
Q psy16020         77 CGYK-NKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWAG--------------DGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        77 ~g~~-n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~~--------------~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      +|+. +.|++||.++.+  ....+..|..   .|.++.+.+              ....++++.|+.|++||.++.+
T Consensus       120 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  193 (379)
T 3jrp_A          120 VASSDGKVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA  193 (379)
T ss_dssp             EEETTSEEEEEECCTTSCCCEEEEECCTT---CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred             EecCCCcEEEEecCCCCceeeEEecCCCC---ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence            7775 689999999874  4456677764   899999987              4668899999999999998754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.14  E-value=5.3e-09  Score=86.55  Aligned_cols=129  Identities=19%  Similarity=0.176  Sum_probs=100.0

Q ss_pred             CceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC---ceEEEeeeC---CEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH---SVRSLAAVY---NKV   75 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~---pV~~m~~v~---~~L   75 (151)
                      .+++..++-+ +.|.++.+.++   .+++|..||.|.+|+...       ......+..+..   +|+++.+..   +.|
T Consensus       150 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  222 (615)
T 1pgu_A          150 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-------FKFSASDRTHHKQGSFVRDVEFSPDSGEFV  222 (615)
T ss_dssp             CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-------BEEEEEECSSSCTTCCEEEEEECSTTCCEE
T ss_pred             CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-------cceeeeecccCCCCceEEEEEECCCCCCEE
Confidence            3455555544 68999999776   699999999999998642       111223443446   999999974   468


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEE-E---ecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSF-D---AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~-~---~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .+|+. +.|++||.++++..+++ .   .|..   .|.++.++....+++++.|+.|++||.++.+.++.+...
T Consensus       223 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  293 (615)
T 1pgu_A          223 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG---GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD  293 (615)
T ss_dssp             EEEETTCCEEEEETTTCCEEEECCBTTBCCCS---CEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEEeCCCeEEEEECCCCCEeEEecccccccCC---ceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence            87775 68999999999999999 5   6764   899999984445889999999999999999999988765

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.14  E-value=1e-08  Score=80.48  Aligned_cols=126  Identities=10%  Similarity=0.055  Sum_probs=93.4

Q ss_pred             CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeeeC-----
Q psy16020          4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAVY-----   72 (151)
Q Consensus         4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v~-----   72 (151)
                      .+.+++..++- +++|.++.+.+  +++++|..||+|.+|+...        .......   .+..+|+|+.+..     
T Consensus       106 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~  177 (343)
T 2xzm_R          106 RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--------ECKFSSAEKENHSDWVSCVRYSPIMKSA  177 (343)
T ss_dssp             TSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--------CEEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred             CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--------CceeeeecccCCCceeeeeeeccccccc
Confidence            45567777764 47999999974  4799999999999998741        1122222   3447899998864     


Q ss_pred             -------CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc-cceeeeE
Q psy16020         73 -------NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT-YQHLQDV  141 (151)
Q Consensus        73 -------~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t-~~~l~~i  141 (151)
                             ..+..|+ ++.|++|| .+.+...++.+|..   .|.++.+++++ .+++++.|+.|++||..+ ......+
T Consensus       178 ~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~---~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~  252 (343)
T 2xzm_R          178 NKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHES---NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF  252 (343)
T ss_dssp             SCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSS---CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred             cccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccc---cceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee
Confidence                   3577776 46999999 56788889999975   89999999776 478999999999999943 3344443

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.12  E-value=3.7e-09  Score=81.56  Aligned_cols=114  Identities=12%  Similarity=0.077  Sum_probs=86.9

Q ss_pred             CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEe-CCeEEEEe
Q psy16020         15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGY-KNKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~-~n~I~vid   87 (151)
                      .++|.++.+.+  +++.+|..||+|.+|+..... .  +  ....+..+..||+++.+.    ++.|..|+ +++|++||
T Consensus         9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~--~--~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-H--K--LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-B--C--CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             cCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-c--E--EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            36899998864  579999999999999975311 1  1  122444556999999985    35677777 46999999


Q ss_pred             CCCCc--EEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccc
Q psy16020         88 PKSLV--VLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        88 ~~t~~--i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~  136 (151)
                      .++++  ....+.+|+.   .|.++.++++   ..+++++.|+.|++||.++.+
T Consensus        84 ~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~  134 (297)
T 2pm7_B           84 EENGRWSQIAVHAVHSA---SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG  134 (297)
T ss_dssp             BSSSCBCCCEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred             cCCCceEEEEEeecCCC---ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence            99874  5566777864   8999999874   468899999999999998653

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.12  E-value=1.4e-08  Score=80.04  Aligned_cols=131  Identities=12%  Similarity=0.122  Sum_probs=99.6

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~   77 (151)
                      ..+.++++.+..+..|.++.+.+  +++|++.. +|.|.+|+...+     +....+..   ...+.++.+..  +.||+
T Consensus        61 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~-----~~~~~~~~---~~~~~~~~~s~dg~~l~~  132 (391)
T 1l0q_A           61 TATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN-----TVAGTVKT---GKSPLGLALSPDGKKLYV  132 (391)
T ss_dssp             TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-----EEEEEEEC---SSSEEEEEECTTSSEEEE
T ss_pred             CCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC-----eEEEEEeC---CCCcceEEECCCCCEEEE
Confidence            35678888999999999999974  46877664 599999987521     12222332   25678888863  46875


Q ss_pred             Ee--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         78 GY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        78 g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++  ++.|++||+.+++..+.+..|.    .+..+.+++++  +|++.+.++.|++||.++.+....+....
T Consensus       133 ~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~  200 (391)
T 1l0q_A          133 TNNGDKTVSVINTVTKAVINTVSVGR----SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA  200 (391)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECCS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred             EeCCCCEEEEEECCCCcEEEEEecCC----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC
Confidence            55  3689999999999999998764    57888888554  67899999999999999999888876543

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.12  E-value=7.1e-10  Score=87.06  Aligned_cols=133  Identities=7%  Similarity=0.002  Sum_probs=95.4

Q ss_pred             CceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcce---EEEeCCCCCceEEEeeeC----CEEEE
Q psy16020          6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYH---TVTLGLPHHSVRSLAAVY----NKVWC   77 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~---~i~l~~~~~pV~~m~~v~----~~Lw~   77 (151)
                      .+++..++ ..+|.++.+++. ++.|..||+|.+|+.... ..|++...+   .+..+. ..+|.++.+..    +.+..
T Consensus        68 ~~~~~~~~-~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s  144 (343)
T 3lrv_A           68 SKTITTIT-TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-ANEIIYMYGHNEVNTEYFIW  144 (343)
T ss_dssp             SSCEEEEE-EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-SSCEEEEECCC---CCEEEE
T ss_pred             CcEEEEEe-cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-CCCEEEEEcCCCCCCCEEEE
Confidence            44455554 356777777776 888888899999876421 125554444   333433 47899999864    45665


Q ss_pred             Ee-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCcccee-eeEeC
Q psy16020         78 GY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHL-QDVDI  143 (151)
Q Consensus        78 g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l-~~idi  143 (151)
                      |+ ++.|++||.++++..+.+..+..  ..|.++.+++++- +++++.|+.|++||.++.+.+ ..+..
T Consensus       145 ~s~dg~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~  211 (343)
T 3lrv_A          145 ADNRGTIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV  211 (343)
T ss_dssp             EETTCCEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred             EeCCCcEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence            66 46899999999999777765543  4699999998766 666799999999999998877 66654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.11  E-value=1.7e-08  Score=79.58  Aligned_cols=131  Identities=17%  Similarity=0.175  Sum_probs=100.6

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCC--eEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQG--RVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~--~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~   77 (151)
                      ..+.++++.++.+..+.++.+.++  ++|++ ..||+|.+|+...+     +....+..+   .+++++.+.  ++.|++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-----~~~~~~~~~---~~v~~~~~spdg~~l~~   90 (391)
T 1l0q_A           19 VTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN-----NVIATVPAG---SSPQGVAVSPDGKQVYV   90 (391)
T ss_dssp             TTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-----EEEEEEECS---SSEEEEEECTTSSEEEE
T ss_pred             CCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC-----eEEEEEECC---CCccceEECCCCCEEEE
Confidence            346678888998888999999754  57554 47999999987421     122233332   588999997  356887


Q ss_pred             Ee--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         78 GY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        78 g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++  ++.|++||+++++....+..|.    .+..+.++++  .++++.+.++.|++||..+.+.+..+....
T Consensus        91 ~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~  158 (391)
T 1l0q_A           91 TNMASSTLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR  158 (391)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred             EECCCCEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence            76  3699999999999999998663    6899999855  567899999999999999999888876543

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.11  E-value=4.7e-09  Score=89.94  Aligned_cols=120  Identities=18%  Similarity=0.178  Sum_probs=91.9

Q ss_pred             eeeeCC-CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCe
Q psy16020         10 PLNKIL-DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNK   82 (151)
Q Consensus        10 ~~i~l~-~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~   82 (151)
                      ..++-+ +.|.+|.+..   +.++.|..||+|.+|+...+.. .. ......+..+..+|+++.+..  +.|..|+ ++.
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~-~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~  453 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK-AY-GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE  453 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT-CS-CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc-cc-ccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence            345544 7999999863   3588899999999999864321 11 111223444569999999974  5677777 468


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t  134 (151)
                      |++||..+++..+++.+|+.   .|.++.+++++- .+|++.|++|++||...
T Consensus       454 v~vwd~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~  503 (694)
T 3dm0_A          454 LRLWDLAAGVSTRRFVGHTK---DVLSVAFSLDNRQIVSASRDRTIKLWNTLG  503 (694)
T ss_dssp             EEEEETTTTEEEEEEECCSS---CEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred             EEEEECCCCcceeEEeCCCC---CEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence            99999999999999999975   899999996654 88999999999999864

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.11  E-value=6.3e-09  Score=83.01  Aligned_cols=122  Identities=10%  Similarity=0.154  Sum_probs=93.7

Q ss_pred             ceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEe--CCCCCceEEEeeeC--CEEEEE
Q psy16020          7 TPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--GLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l--~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      +++..++-+ +.|.++.++++   .+++|..||+|.+|+...+       .....+  ..+..+|+++.+..  +.|.+|
T Consensus       122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  194 (402)
T 2aq5_A          122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-------AAVLTLGPDVHPDTIYSVDWSRDGALICTS  194 (402)
T ss_dssp             SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-------EEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred             CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-------CccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence            556666644 79999999754   6888999999999987521       122344  44568999999973  568888


Q ss_pred             eC-CeEEEEeCCCCcEEEEE-EecCCCCCceeEEEEeCCEEEEE-E---cCCCeEEEEeCCccce
Q psy16020         79 YK-NKIHVVDPKSLVVLKSF-DAHPRRESQVRQMTWAGDGVWVS-I---RLDSTLRMYNAHTYQH  137 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~-~~h~~~~~~I~~m~~~~~~vwis-~---~~d~~l~lwd~~t~~~  137 (151)
                      +. +.|++||+++++..+++ .+|..  ..+.++.+++++-+++ +   +.|+.|++||.++.+.
T Consensus       195 ~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~  257 (402)
T 2aq5_A          195 CRDKRVRVIEPRKGTVVAEKDRPHEG--TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE  257 (402)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECSSCS--SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred             ecCCcEEEEeCCCCceeeeeccCCCC--CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence            85 68999999999999999 67754  3588899987776444 4   5899999999998664

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.11  E-value=5.1e-09  Score=94.41  Aligned_cols=118  Identities=14%  Similarity=0.169  Sum_probs=96.1

Q ss_pred             CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020         15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~   89 (151)
                      .+.|.++.+.++  .+.+|..||+|.+|+...+       .....+..+..+|+|+.+..  +.|.+|+. +.|++||..
T Consensus       615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-------~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~  687 (1249)
T 3sfz_A          615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETG-------EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA  687 (1249)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             cccEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence            379999999754  6888999999999987532       12334545569999999974  56777775 689999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeC--C-EEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAG--D-GVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~--~-~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +++..+++.+|..   .|.++.+++  + .+.++++.|+.|++||..+.+.+..+.
T Consensus       688 ~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~  740 (1249)
T 3sfz_A          688 TGKLVHTYDEHSE---QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF  740 (1249)
T ss_dssp             TCCEEEEEECCSS---CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred             CCceEEEEcCCCC---cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence            9999999999975   899999986  3 358899999999999999998887663

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.11  E-value=1.2e-08  Score=80.54  Aligned_cols=130  Identities=7%  Similarity=-0.028  Sum_probs=96.5

Q ss_pred             CceeeeeeC-CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEE
Q psy16020          6 PTPYPLNKI-LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCG   78 (151)
Q Consensus         6 ~~~l~~i~l-~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g   78 (151)
                      .+....+.- ++.|.++.+.++   .+++|..||+|.+|+....     +....+.+..+..+|+++.+..   +.|.+|
T Consensus        63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  137 (383)
T 3ei3_B           63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-----NKTSFIQGMGPGDAITGMKFNQFNTNQLFVS  137 (383)
T ss_dssp             CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST-----TCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred             cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-----ccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence            444555543 379999999764   6999999999999998632     2333444434569999999975   357777


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +. +.|++||.++ +..+.+..|......|.++.+++++ .+++++.|+.|++||.+ .+.+..+.
T Consensus       138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~  201 (383)
T 3ei3_B          138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK  201 (383)
T ss_dssp             ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE
T ss_pred             eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec
Confidence            64 6899999996 6667777776555689999999654 48899999999999994 66666653

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.10  E-value=1.8e-09  Score=85.34  Aligned_cols=129  Identities=13%  Similarity=0.105  Sum_probs=98.9

Q ss_pred             CCCceeeeeeC-------CCceeeeEEeCC---eEEEEecCC---cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee
Q psy16020          4 PHPTPYPLNKI-------LDTALPPVHVQG---RVVCALADG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA   70 (151)
Q Consensus         4 ~~~~~l~~i~l-------~~~V~~i~~~~~---~v~vgl~nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~   70 (151)
                      .+.+++..++.       ..+|.++.+.++   .+++|..||   .|.+|+......    ....+.. .+..+|+++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~----~~~~~~~-~~~~~v~~~~~  270 (416)
T 2pm9_A          196 KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT----PLQTLNQ-GHQKGILSLDW  270 (416)
T ss_dssp             TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS----CSBCCCS-CCSSCEEEEEE
T ss_pred             CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC----CcEEeec-CccCceeEEEe
Confidence            45566777776       468999999864   588888888   999999864221    1111221 33589999999


Q ss_pred             eC---CEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeee
Q psy16020         71 VY---NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        71 v~---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      ..   +.|.+|+. +.|++||.++++..+++.+|..   .|.++.+++++  .+++++.|+.|++||..+.+..+.
T Consensus       271 s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~  343 (416)
T 2pm9_A          271 CHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN---WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD  343 (416)
T ss_dssp             CSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS---CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred             CCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC---ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence            63   45777774 6999999999999999999975   89999999765  789999999999999998765544

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.10  E-value=7.4e-09  Score=81.11  Aligned_cols=135  Identities=10%  Similarity=0.072  Sum_probs=109.5

Q ss_pred             CCCCCceeeeeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020          2 EYPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG   78 (151)
Q Consensus         2 ~~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g   78 (151)
                      +..+.+.++++ |+...+.  |...+++||++.- ++.+.+|+..     +++....++.+.  ++. .++.-+++||++
T Consensus        81 D~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~-----Tl~~~~ti~~~~--eGw-GLt~Dg~~L~vS  151 (268)
T 3nok_A           81 SLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM-----PPQRERTTRYSG--EGW-GLCYWNGKLVRS  151 (268)
T ss_dssp             CSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT-----TTEEEEEEECSS--CCC-CEEEETTEEEEE
T ss_pred             ECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC-----cCcEEEEEeCCC--cee-EEecCCCEEEEE
Confidence            45678889999 9988776  8888999999853 6789999976     455666777754  443 445567899999


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .+ ++|+++|++|+++++++++..+.  -..++.|.+.+..+|+..-.+..|.+-|++|++.+..||++.
T Consensus       152 dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~  221 (268)
T 3nok_A          152 DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASA  221 (268)
T ss_dssp             CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred             CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence            96 69999999999999999975432  235788899888899999999999999999999999999873

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.10  E-value=2.6e-09  Score=90.28  Aligned_cols=122  Identities=12%  Similarity=0.147  Sum_probs=90.2

Q ss_pred             CceeeeEEeCC--------eEEEEecCCcEEEEEcCCCCCC-----CCCcceEEEeCCCCCceEEEeeeC-CEEEEEeC-
Q psy16020         16 DTALPPVHVQG--------RVVCALADGSVAIFRRGPDGQW-----DLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK-   80 (151)
Q Consensus        16 ~~V~~i~~~~~--------~v~vgl~nG~l~v~~~~~~~~w-----d~~~~~~i~l~~~~~pV~~m~~v~-~~Lw~g~~-   80 (151)
                      +.|.++.+.+.        .+..|..||+|.+|+...+..-     ....+ ...+..+..+|+|+.+.. +.|.+|+. 
T Consensus       208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p-~~~l~~h~~~v~sv~~s~~~~lasgs~D  286 (524)
T 2j04_B          208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP-SLTLSLADSLITTFDFLSPTTVVCGFKN  286 (524)
T ss_dssp             CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC-SEEECCTTTCEEEEEESSSSEEEEEETT
T ss_pred             CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc-eEEEEcCCCCEEEEEecCCCeEEEEeCC
Confidence            67899998763        6777899999999998643210     01111 123444459999999864 67888886 


Q ss_pred             CeEEEEeCCCCc-EEEEEEecCCCCCceeEE--EEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         81 NKIHVVDPKSLV-VLKSFDAHPRRESQVRQM--TWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        81 n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m--~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +.|.+||.++++ ....+.+|+.   .|.++  .++++  .+++|++.|++|+|||.++.++++.+
T Consensus       287 gtV~lWD~~~~~~~~~~~~~H~~---~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~  349 (524)
T 2j04_B          287 GFVAEFDLTDPEVPSFYDQVHDS---YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT  349 (524)
T ss_dssp             SEEEEEETTBCSSCSEEEECSSS---CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred             CEEEEEECCCCCCceEEeecccc---cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence            699999999774 4567889975   89999  44565  47899999999999999987765443

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.09  E-value=6.2e-09  Score=89.46  Aligned_cols=118  Identities=19%  Similarity=0.178  Sum_probs=94.0

Q ss_pred             CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020         14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~   88 (151)
                      -++.|.++.++++  .+.+|..||.|.+|+...+     .....+.  .+..||+++.+..  +.|.+|+. +.|++||.
T Consensus        12 h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-----~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~   84 (814)
T 3mkq_A           12 RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-----VEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (814)
T ss_dssp             ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----EEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-----ceEEEEe--cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence            3479999999754  6999999999999987521     1222333  3459999999974  66888875 68999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCcc-ceeeeE
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY-QHLQDV  141 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~-~~l~~i  141 (151)
                      ++++...++.+|..   .|.++.+++++ .+++++.|+.|++||..+. +..+.+
T Consensus        85 ~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~  136 (814)
T 3mkq_A           85 NTGEKVVDFEAHPD---YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF  136 (814)
T ss_dssp             TTCCEEEEEECCSS---CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred             CCCcEEEEEecCCC---CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence            99999999999975   89999999776 4789999999999999986 444444

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.08  E-value=5.3e-09  Score=84.31  Aligned_cols=116  Identities=16%  Similarity=0.216  Sum_probs=85.1

Q ss_pred             CCceeeeEEeCC---eEEEE--ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC---CeEE
Q psy16020         15 LDTALPPVHVQG---RVVCA--LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK---NKIH   84 (151)
Q Consensus        15 ~~~V~~i~~~~~---~v~vg--l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~---n~I~   84 (151)
                      ..+|.++.+.+.   .+.+|  ..||+|.+|+...+     .....+..   ..++.++...  ++.+.+++|   +.|+
T Consensus       276 ~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-----~~~~~~~~---~~~v~~~~~~~~~~~lv~~sg~~d~~I~  347 (420)
T 4gga_A          276 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-----ACLSAVDA---HSQVCSILWSPHYKELISGHGFAQNQLV  347 (420)
T ss_dssp             SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-----EEEEEEEC---SSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred             CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-----ccceeecc---ccceeeeeecCCCCeEEEEEecCCCEEE
Confidence            368888888653   34443  36899999987521     11122222   2677777776  467887763   6899


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +||..+++...+|.+|+.   .|.+|+++++| .++|++.|++|++||..+.++.++.
T Consensus       348 iwd~~~~~~v~~l~gH~~---~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~  402 (420)
T 4gga_A          348 IWKYPTMAKVAELKGHTS---RVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR  402 (420)
T ss_dssp             EEETTTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---
T ss_pred             EEECCCCcEEEEEcCCCC---CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchh
Confidence            999999999999999975   89999999776 4889999999999999877665554

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.08  E-value=6.8e-09  Score=80.15  Aligned_cols=126  Identities=6%  Similarity=-0.058  Sum_probs=98.6

Q ss_pred             CceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK   80 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~   80 (151)
                      .+.+..+..+ .+|.++.+.+  +.+++|..||.|.+|+....     +....+.   ...+++++.+..  ..+++|++
T Consensus       208 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~  279 (369)
T 3zwl_B          208 YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL-----QVLKKYE---TDCPLNTAVITPLKEFIILGGG  279 (369)
T ss_dssp             TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEEEEE---CSSCEEEEEECSSSSEEEEEEC
T ss_pred             cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC-----ceeeeec---CCCCceeEEecCCCceEEEeec
Confidence            5667777755 7899999864  46889999999999987521     2223333   238899999873  66888775


Q ss_pred             -C--------------eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 -N--------------KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 -n--------------~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                       +              .|++||..+++....+.+|..   .|+++.+++++ .+++++.|+.|++||.++......++
T Consensus       280 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~  354 (369)
T 3zwl_B          280 QEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG---PLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD  354 (369)
T ss_dssp             CC-------------CEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCH
T ss_pred             CCCceEEEEecCCCcceeEEEecCCCcchhheecccC---cEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHH
Confidence             3              799999999999999999975   89999999664 58899999999999999876655554

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.08  E-value=4.7e-09  Score=82.75  Aligned_cols=125  Identities=13%  Similarity=0.147  Sum_probs=93.3

Q ss_pred             CCceeeeeeCC-C-ceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          5 HPTPYPLNKIL-D-TALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         5 ~~~~l~~i~l~-~-~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      ..++++.++-+ + .|.+|.+.++  .+.+|..||+|.+|+...+ .|   .........+..+|+++.+..  +.|..|
T Consensus         4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~-~~---~~~~~~~~~h~~~v~~~~~sp~g~~l~s~   79 (345)
T 3fm0_A            4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD-SW---ICKSVLSEGHQRTVRKVAWSPCGNYLASA   79 (345)
T ss_dssp             CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT-EE---EEEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred             cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC-cc---eeeeeeccccCCcEEEEEECCCCCEEEEE
Confidence            34667777643 5 8999999754  6888999999999987421 11   011222234568999999974  568877


Q ss_pred             eC-CeEEEEeCCCC--cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         79 YK-NKIHVVDPKSL--VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        79 ~~-n~I~vid~~t~--~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                      +. +.|++||..+.  +...++.+|+.   .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus        80 s~D~~v~iw~~~~~~~~~~~~~~~h~~---~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~  138 (345)
T 3fm0_A           80 SFDATTCIWKKNQDDFECVTTLEGHEN---EVKSVAWAPSGNLLATCSRDKSVWVWEVDEED  138 (345)
T ss_dssp             ETTSCEEEEEECCC-EEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred             ECCCcEEEEEccCCCeEEEEEccCCCC---CceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence            74 68999998766  46788999975   89999999665 58899999999999998654

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.08  E-value=6.2e-09  Score=86.10  Aligned_cols=114  Identities=18%  Similarity=0.208  Sum_probs=88.4

Q ss_pred             CceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC
Q psy16020          6 PTPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK   80 (151)
Q Consensus         6 ~~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~   80 (151)
                      .+++..+.- +++|.++.+.++  .+.+|..||+|.+|+..  |    +..+  .+..+..+|+++.+..  ..|..|+.
T Consensus       457 ~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~----~~~~--~~~~h~~~v~~l~~s~dg~~l~s~~~  528 (577)
T 2ymu_A          457 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--G----QLLQ--TLTGHSSSVRGVAFSPDGQTIASASD  528 (577)
T ss_dssp             SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--S----CEEE--EEECCSSCEEEEEECTTSSCEEEEET
T ss_pred             CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--C----CEEE--EEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence            455666654 479999998754  68888999999999853  2    2222  3333458999999974  45777775


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEe
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYN  131 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd  131 (151)
                       +.|++||. +++..+++.+|+.   .|.++.+++++- ++|++.|+.|++||
T Consensus       529 dg~v~lwd~-~~~~~~~~~~h~~---~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          529 DKTVKLWNR-NGQLLQTLTGHSS---SVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             TSEEEEECT-TSCEEEEEECCSS---CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cCEEEEEeC-CCCEEEEEcCCCC---CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence             58999995 7889999999975   899999997764 78999999999998

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.08  E-value=6.2e-09  Score=84.40  Aligned_cols=132  Identities=11%  Similarity=0.068  Sum_probs=96.6

Q ss_pred             CceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCC--CCCCcceEEEeCCCCCceEEEeeeC---CEEE
Q psy16020          6 PTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQ--WDLSKYHTVTLGLPHHSVRSLAAVY---NKVW   76 (151)
Q Consensus         6 ~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~--wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw   76 (151)
                      .+++..++-+ +.|.+|.+.++   .+++|..||+|.+|+....+.  +.+...  ..+..+..+|.++.+..   +.+.
T Consensus       171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~~l~  248 (430)
T 2xyi_A          171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAK--NIFTGHTAVVEDVAWHLLHESLFG  248 (430)
T ss_dssp             CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECS--EEECCCSSCEEEEEECSSCTTEEE
T ss_pred             CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccc--eeecCCCCCEeeeEEeCCCCCEEE
Confidence            3455566544 68999998754   788999999999999875321  111111  12333458999999963   4466


Q ss_pred             EEe-CCeEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc-cceeeeEe
Q psy16020         77 CGY-KNKIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT-YQHLQDVD  142 (151)
Q Consensus        77 ~g~-~n~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t-~~~l~~id  142 (151)
                      +++ +++|++||.++.   +....+.+|..   .|++|.+.+++  ++++++.|+.|++||.++ .+++..+.
T Consensus       249 s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~  318 (430)
T 2xyi_A          249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTA---EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE  318 (430)
T ss_dssp             EEETTSEEEEEETTCSCSSSCSEEEECCSS---CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred             EEeCCCeEEEEECCCCCCCcceeEeecCCC---CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee
Confidence            666 469999999987   57778888864   89999999655  788999999999999998 55566654

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.07  E-value=3.3e-09  Score=94.59  Aligned_cols=133  Identities=12%  Similarity=0.080  Sum_probs=101.1

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE--------EeCCCCCceEEEeeeC
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV--------TLGLPHHSVRSLAAVY   72 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i--------~l~~~~~pV~~m~~v~   72 (151)
                      ..+.+++..++.++.|.++.+.+  +.+++|..||+|.+|+......    .+..+        .+..+..+|+++.+..
T Consensus        86 ~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~----~~~~i~~~~~~~~~~~~h~~~V~sl~~sp  161 (902)
T 2oaj_A           86 LYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL----SSFKLDNLQKSSFFPAARLSPIVSIQWNP  161 (902)
T ss_dssp             TTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE----EEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred             CCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc----ccceeccccccccccccCCCCeEEEEEcc
Confidence            34567888888888999999865  4799999999999998753210    00111        1123458999999985


Q ss_pred             ---CEEEEEeC-CeEEEEeCCCCcEEEEEEecCC---------------CCCceeEEEEeCCE-EEEEEcCCCeEEEEeC
Q psy16020         73 ---NKVWCGYK-NKIHVVDPKSLVVLKSFDAHPR---------------RESQVRQMTWAGDG-VWVSIRLDSTLRMYNA  132 (151)
Q Consensus        73 ---~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~---------------~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~  132 (151)
                         +.|.+|++ +.| +||.++++..+++..|..               ....|+++.++++| .+++++.|+.|++||.
T Consensus       162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~  240 (902)
T 2oaj_A          162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA  240 (902)
T ss_dssp             TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred             CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence               35778875 578 999999999999987711               02469999999776 4889999999999999


Q ss_pred             Cccceeee
Q psy16020        133 HTYQHLQD  140 (151)
Q Consensus       133 ~t~~~l~~  140 (151)
                      +++++++.
T Consensus       241 ~~g~~~~~  248 (902)
T 2oaj_A          241 NSGHMIMA  248 (902)
T ss_dssp             TTCCEEEE
T ss_pred             CCCcEEEE
Confidence            99887764

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.07  E-value=1.9e-08  Score=78.65  Aligned_cols=136  Identities=8%  Similarity=0.128  Sum_probs=109.8

Q ss_pred             CCCCCceeeeeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020          2 EYPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCG   78 (151)
Q Consensus         2 ~~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g   78 (151)
                      +..+.+.+.++.++...+.  |...+++||++.- ++.+.+|+..     +++....++.+.  ++. .+..-+++||.+
T Consensus        71 D~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~-----t~~~~~ti~~~~--eG~-glt~dg~~L~~S  142 (262)
T 3nol_A           71 DIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR-----NLRQVRSFNYDG--EGW-GLTHNDQYLIMS  142 (262)
T ss_dssp             CTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-----TCCEEEEEECSS--CCC-CEEECSSCEEEC
T ss_pred             ECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc-----cCcEEEEEECCC--Cce-EEecCCCEEEEE
Confidence            3467889999999988766  7888999999974 6789999986     455666777754  443 333446789999


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .+ ++|+++|++|+++++++++..+  +-..++.|.+.+..+|+..-.+..|.+.|++|++.+..||++.
T Consensus       143 dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~  212 (262)
T 3nol_A          143 DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNG  212 (262)
T ss_dssp             CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred             CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence            86 6899999999999999998532  1235677888888899999999999999999999999999864

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.07  E-value=2.1e-08  Score=77.56  Aligned_cols=135  Identities=10%  Similarity=0.121  Sum_probs=109.4

Q ss_pred             CCCCceeeeeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          3 YPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~--i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      ..+.+.+.+++++..++.  |...++++|+..- +|.+.+|+..     +++....++.+.  .+. .+..-+++||++.
T Consensus        50 ~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~-----tl~~~~ti~~~~--~Gw-glt~dg~~L~vSd  121 (243)
T 3mbr_X           50 LETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA-----TLTPRARFRYPG--EGW-ALTSDDSHLYMSD  121 (243)
T ss_dssp             TTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-----TTEEEEEEECSS--CCC-EEEECSSCEEEEC
T ss_pred             CCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-----cCcEEEEEeCCC--Cce-EEeeCCCEEEEEC
Confidence            457789999999987754  4777899999852 6789999986     455666777765  554 4455578899998


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      | ++|+++|++|+++++++++..+.  -..++.|.+.+..+|+..-.+..|.+-|++|++.+..||++.
T Consensus       122 gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~  190 (243)
T 3mbr_X          122 GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQA  190 (243)
T ss_dssp             SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred             CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence            7 58999999999999999975432  236788999988899999899999999999999999999774

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.07  E-value=8.2e-09  Score=93.05  Aligned_cols=132  Identities=16%  Similarity=0.146  Sum_probs=104.3

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C--EE
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N--KV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~--~L   75 (151)
                      ..+.+++..++-+ +.|.++.+.++  .+.+|..||+|.+|+...+     +...  .+..+..+|.|+.+..  +  .+
T Consensus       644 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-----~~~~--~~~~~~~~v~~~~~~~~~~~~~l  716 (1249)
T 3sfz_A          644 AETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG-----KLVH--TYDEHSEQVNCCHFTNKSNHLLL  716 (1249)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEE--EEECCSSCEEEEEECSSSSCCEE
T ss_pred             CCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-----ceEE--EEcCCCCcEEEEEEecCCCceEE
Confidence            3556777888754 79999999754  7899999999999987532     1222  3333459999999974  3  35


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ..|+. +.|++||.++++...++.+|..   .|+++.+++++ .+++++.|+.|++||.++.+....+...
T Consensus       717 ~sg~~d~~v~vwd~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~  784 (1249)
T 3sfz_A          717 ATGSNDFFLKLWDLNQKECRNTMFGHTN---SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVK  784 (1249)
T ss_dssp             EEEETTSCEEEEETTSSSEEEEECCCSS---CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECC
T ss_pred             EEEeCCCeEEEEECCCcchhheecCCCC---CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccc
Confidence            55654 6899999999999999999975   89999999665 5889999999999999999988888654

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.06  E-value=3.3e-09  Score=84.70  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=90.9

Q ss_pred             CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe---CCCCCceEEEeee---CCEEEEEe-CCeEEE
Q psy16020         16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAV---YNKVWCGY-KNKIHV   85 (151)
Q Consensus        16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l---~~~~~pV~~m~~v---~~~Lw~g~-~n~I~v   85 (151)
                      +.|.++.+.+   .+++.|..||+|.+|+...+.     ....+..   ..+..+|.++.+.   ++.+..|+ ++.|++
T Consensus       158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~  232 (380)
T 3iz6_a          158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-----RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL  232 (380)
T ss_dssp             SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-----EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEE
T ss_pred             cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-----EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEE
Confidence            4667777654   369999999999999865321     1111111   2235889999885   35577666 468999


Q ss_pred             EeCC-CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         86 VDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        86 id~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ||.+ +.+..+++.+|..   .|+++.+++++ .++|++.|++|++||.++.+.++.++..
T Consensus       233 wd~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~  290 (380)
T 3iz6_a          233 WDLRITSRAVRTYHGHEG---DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE  290 (380)
T ss_dssp             EETTTTCCCCEEECCCSS---CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred             EECCCCCcceEEECCcCC---CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence            9998 5678899999975   89999999775 4889999999999999999988877644

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.06  E-value=3e-09  Score=82.88  Aligned_cols=113  Identities=17%  Similarity=0.124  Sum_probs=86.7

Q ss_pred             CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEe-CCeEEEEe
Q psy16020         15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGY-KNKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~-~n~I~vid   87 (151)
                      .++|.++.+.  ++++.+|..||+|.+|+...++     ......+..+..+|+++.+.    ++.|..|+ +++|++||
T Consensus        13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A           13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            4799999986  4579999999999999875321     11123444556999999985    35677777 46899999


Q ss_pred             CCCCc--EEEEEEecCCCCCceeEEEEeCC--E-EEEEEcCCCeEEEEeCCcc
Q psy16020         88 PKSLV--VLKSFDAHPRRESQVRQMTWAGD--G-VWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        88 ~~t~~--i~~~~~~h~~~~~~I~~m~~~~~--~-vwis~~~d~~l~lwd~~t~  135 (151)
                      .++++  ...++.+|+.   .|+++.++++  + .+++++.|+.|++||.++.
T Consensus        88 ~~~~~~~~~~~~~~h~~---~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~  137 (316)
T 3bg1_A           88 EENGTWEKSHEHAGHDS---SVNSVCWAPHDYGLILACGSSDGAISLLTYTGE  137 (316)
T ss_dssp             CSSSCCCEEEEECCCSS---CCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred             CCCCcceEEEEccCCCC---ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence            99874  6667888875   8999999875  3 5889999999999999865

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.05  E-value=7.2e-09  Score=80.57  Aligned_cols=117  Identities=10%  Similarity=0.061  Sum_probs=90.1

Q ss_pred             CCceeeeEEeCC--eEEEEecCCcEEEEEcCCC--------CCCCC--Ccce-EEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020         15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPD--------GQWDL--SKYH-TVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus        15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~--------~~wd~--~~~~-~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      .+.|.+|.+.++  .+++|..||.|.+|+....        ..|..  .... ...+..+..+|+++.+..  +.|++|+
T Consensus       142 ~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  221 (372)
T 1k8k_C          142 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS  221 (372)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE
T ss_pred             CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe
Confidence            468999998754  6888999999999995311        11211  1112 234444558999999964  5788888


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t  134 (151)
                      . +.|++||.++++..+++..|..   .|.++.+++++-+++.+.|+.|++||..+
T Consensus       222 ~d~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~d~~i~i~~~~~  274 (372)
T 1k8k_C          222 HDSTVCLADADKKMAVATLASETL---PLLAVTFITESSLVAAGHDCFPVLFTYDS  274 (372)
T ss_dssp             TTTEEEEEEGGGTTEEEEEECSSC---CEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred             CCCEEEEEECCCCceeEEEccCCC---CeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence            5 6899999999999999998864   89999999877777777999999999987

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.05  E-value=2.2e-08  Score=76.84  Aligned_cols=116  Identities=8%  Similarity=0.045  Sum_probs=90.7

Q ss_pred             CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020         16 DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~   88 (151)
                      +.|.++.+..+    .++.|..||.|.+|+....       .....+..+..+|+++.+..  +.|..|+. +.|++||.
T Consensus       172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~-------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~  244 (340)
T 4aow_A          172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC-------KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL  244 (340)
T ss_dssp             SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             CcccceEEccCCCCcEEEEEcCCCEEEEEECCCC-------ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence            57777776532    4667788999999987521       12223444568999999974  56777774 68999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .+.+..+.+..+.    .|.++.+++++.+++++.|+.|++||.++.+.+.++.
T Consensus       245 ~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~  294 (340)
T 4aow_A          245 NEGKHLYTLDGGD----IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK  294 (340)
T ss_dssp             TTTEEEEEEECSS----CEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEC
T ss_pred             ccCceeeeecCCc----eEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecc
Confidence            9999999998663    7999999988889999999999999999988877764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.04  E-value=3.9e-09  Score=82.78  Aligned_cols=124  Identities=12%  Similarity=0.098  Sum_probs=81.1

Q ss_pred             CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--C-CEEEEEeCCeEEEEeCC
Q psy16020         15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--Y-NKVWCGYKNKIHVVDPK   89 (151)
Q Consensus        15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~-~~Lw~g~~n~I~vid~~   89 (151)
                      ..+|.++.+.++  .+++|..||.|.+|+......- ...... .......++......  . .-++++.++.|++||..
T Consensus       245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~  322 (408)
T 4a11_B          245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT-LVNYGK-VCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY  322 (408)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC-CCCCCC-CCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred             cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc-eecccc-ccccccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence            368999998654  7999999999999998643210 000000 001111222222222  2 34555567899999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      +++...++.+|..   .|.++.+++++ .+++++.|+.|++||.++++++..++-
T Consensus       323 ~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~  374 (408)
T 4a11_B          323 SGEQITMLKGHYK---TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE  374 (408)
T ss_dssp             TCCEEEEECCCSS---CEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred             CCcceeeeccCCC---eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence            9999999999975   89999999764 578999999999999999998887653

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.04  E-value=8.6e-09  Score=80.78  Aligned_cols=112  Identities=13%  Similarity=0.143  Sum_probs=88.2

Q ss_pred             CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-----CEEEEEeC-CeEE
Q psy16020         14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-----NKVWCGYK-NKIH   84 (151)
Q Consensus        14 l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-----~~Lw~g~~-n~I~   84 (151)
                      ...+|.++.+.+   +.+++|..||.|.+|+....     +....+.   ...++.++....     ..+.+|+. +.|+
T Consensus        98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  169 (408)
T 4a11_B           98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL-----QTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQ  169 (408)
T ss_dssp             CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT-----EEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred             CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC-----ccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence            457999999976   36888888999999987521     1222233   237888888863     26777775 6899


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~  136 (151)
                      +||.++++..+.+.+|..   .|.++.+++++  ++++++.|+.|++||.++.+
T Consensus       170 ~~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~  220 (408)
T 4a11_B          170 LCDLKSGSCSHILQGHRQ---EILAVSWSPRYDYILATASADSRVKLWDVRRAS  220 (408)
T ss_dssp             EEESSSSCCCEEECCCCS---CEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred             EEeCCCcceeeeecCCCC---cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence            999999999999999875   89999999776  68899999999999998755

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.04  E-value=2.3e-09  Score=85.67  Aligned_cols=119  Identities=6%  Similarity=0.086  Sum_probs=86.5

Q ss_pred             CceeeeEEeCC----eEEEEecCCcEEEEEcCCCCC----CC----------------CCcce-------------EEEe
Q psy16020         16 DTALPPVHVQG----RVVCALADGSVAIFRRGPDGQ----WD----------------LSKYH-------------TVTL   58 (151)
Q Consensus        16 ~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~----wd----------------~~~~~-------------~i~l   58 (151)
                      ++|.+|.+.++    .+++|..||+|.+|+......    ++                +..+.             ..-.
T Consensus        94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (447)
T 3dw8_B           94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA  173 (447)
T ss_dssp             CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred             CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence            78999999764    699999999999998752110    00                00110             0112


Q ss_pred             CCCCCceEEEeeeC--CEEEEEeCCeEEEEeCC-CCcEEEE-------EEecCCCCCceeEEEEeCCE--EEEEEcCCCe
Q psy16020         59 GLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPK-SLVVLKS-------FDAHPRRESQVRQMTWAGDG--VWVSIRLDST  126 (151)
Q Consensus        59 ~~~~~pV~~m~~v~--~~Lw~g~~n~I~vid~~-t~~i~~~-------~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~  126 (151)
                      ..+..+|+++.+..  +.|..|.++.|++||.+ +.+..+.       +.+|..   .|.++.+++++  .+++++.|+.
T Consensus       174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~s~~~dg~  250 (447)
T 3dw8_B          174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTE---VITAAEFHPNSCNTFVYSSSKGT  250 (447)
T ss_dssp             SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCC---CEEEEEECSSCTTEEEEEETTSC
T ss_pred             cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCc---ceEEEEECCCCCcEEEEEeCCCe
Confidence            34569999999974  56777766799999999 4445553       345654   89999999875  7899999999


Q ss_pred             EEEEeCCccce
Q psy16020        127 LRMYNAHTYQH  137 (151)
Q Consensus       127 l~lwd~~t~~~  137 (151)
                      |++||.++.+.
T Consensus       251 i~iwd~~~~~~  261 (447)
T 3dw8_B          251 IRLCDMRASAL  261 (447)
T ss_dssp             EEEEETTTCSS
T ss_pred             EEEEECcCCcc
Confidence            99999998876

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.04  E-value=1.9e-08  Score=80.19  Aligned_cols=120  Identities=10%  Similarity=0.114  Sum_probs=91.4

Q ss_pred             CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020         16 DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~---~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~   89 (151)
                      ..|.++.+.   ++.++.|..||+|.+|+....+     . ....+..+..+|+++.+..  ..|..|+. +.|++||..
T Consensus       206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-----~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~  279 (380)
T 3iz6_a          206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-----R-AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR  279 (380)
T ss_dssp             SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-----C-CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred             cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-----c-ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence            578888874   4578889999999999875322     1 1223444568999999974  56777775 689999999


Q ss_pred             CCcEEEEEEecCCC----CCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         90 SLVVLKSFDAHPRR----ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        90 t~~i~~~~~~h~~~----~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +++..+.+..+...    ...|++++++++| .+++++.|+.|++||..+.+.+..+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~  336 (380)
T 3iz6_a          280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL  336 (380)
T ss_dssp             TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred             CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence            99999998876432    1248999998665 4788999999999999988887766

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.03  E-value=1.5e-08  Score=85.84  Aligned_cols=133  Identities=16%  Similarity=0.212  Sum_probs=97.1

Q ss_pred             CceeeeeeC-CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCC-----------------CCCCCcceE----------
Q psy16020          6 PTPYPLNKI-LDTALPPVHVQG--RVVCALADGSVAIFRRGPDG-----------------QWDLSKYHT----------   55 (151)
Q Consensus         6 ~~~l~~i~l-~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~-----------------~wd~~~~~~----------   55 (151)
                      .+.+..++- .+.|.++.+.++  ++..|..||+|.+|+.....                 .|+.+....          
T Consensus        49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~  128 (611)
T 1nr0_A           49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF  128 (611)
T ss_dssp             SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred             cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence            344444543 378999999754  68888899999999864210                 011111111          


Q ss_pred             --E----------EeCCCCCceEEEeeeCC---EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EE
Q psy16020         56 --V----------TLGLPHHSVRSLAAVYN---KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VW  118 (151)
Q Consensus        56 --i----------~l~~~~~pV~~m~~v~~---~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vw  118 (151)
                        +          .+..+..+|+++.+..+   .|..|+. +.|++||.++++..+++.+|++   .|.++.+++++ .+
T Consensus       129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~---~V~~v~fspdg~~l  205 (611)
T 1nr0_A          129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK---FVHSVRYNPDGSLF  205 (611)
T ss_dssp             EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS---CEEEEEECTTSSEE
T ss_pred             eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC---ceEEEEECCCCCEE
Confidence              1          12224578999998752   4777774 6899999999999999999975   89999999776 48


Q ss_pred             EEEcCCCeEEEEeCCccceeeeE
Q psy16020        119 VSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       119 is~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +|++.|++|++||..+++.+..+
T Consensus       206 as~s~D~~i~lwd~~~g~~~~~~  228 (611)
T 1nr0_A          206 ASTGGDGTIVLYNGVDGTKTGVF  228 (611)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEC
T ss_pred             EEEECCCcEEEEECCCCcEeeee
Confidence            89999999999999998887766

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.03  E-value=5.7e-09  Score=84.60  Aligned_cols=113  Identities=12%  Similarity=0.043  Sum_probs=84.3

Q ss_pred             CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeC-CeEEEEeC
Q psy16020         16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~-n~I~vid~   88 (151)
                      +.|+||.+++   +.|.+|..||+|.+|+...+     +....+.+..+..+|+||.+.   ++.|..|+. +.|.+||.
T Consensus       120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-----~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~  194 (435)
T 4e54_B          120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-----DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF  194 (435)
T ss_dssp             SCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-----SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred             CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-----CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence            5799999975   35888999999999987522     233455555567999999996   256777774 68999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t  134 (151)
                      ++..... +..+......+.++.+++++ ..++++.|+.|++||.++
T Consensus       195 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~  240 (435)
T 4e54_B          195 KGNILRV-FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG  240 (435)
T ss_dssp             TSCEEEE-EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred             cCCceeE-EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence            8765544 44343444568888888664 478999999999999874

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.03  E-value=7.8e-09  Score=79.79  Aligned_cols=134  Identities=10%  Similarity=0.096  Sum_probs=101.8

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee--C----CEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV--Y----NKV   75 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v--~----~~L   75 (151)
                      ..+.+++..++.+..+.++....+.++++..+|.+.+|+.....      .....+.. ...+++++.+.  .    +.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (368)
T 3mmy_A          158 TRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP------SEFRRIESPLKHQHRCVAIFKDKQNKPTGF  231 (368)
T ss_dssp             SSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC------EEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred             CCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc------chhhhccccccCCCceEEEcccCCCCCCeE
Confidence            45677888999999999999999999999999999999875321      11112221 23666777664  2    227


Q ss_pred             EEEeC-CeEEEEeCCCC---cEEEEEEecCCCC---------CceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         76 WCGYK-NKIHVVDPKSL---VVLKSFDAHPRRE---------SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~---~i~~~~~~h~~~~---------~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .+|+. +.|++||.++.   +....+.+|....         ..|+++.+++++ .+++++.|+.|++||.+++++++.+
T Consensus       232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~  311 (368)
T 3mmy_A          232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS  311 (368)
T ss_dssp             EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred             EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence            77775 68999999987   6778888885311         159999999765 5889999999999999999998887


Q ss_pred             e
Q psy16020        142 D  142 (151)
Q Consensus       142 d  142 (151)
                      .
T Consensus       312 ~  312 (368)
T 3mmy_A          312 E  312 (368)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.02  E-value=2.7e-08  Score=85.47  Aligned_cols=131  Identities=14%  Similarity=0.161  Sum_probs=102.3

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~   77 (151)
                      +.+.+++..++.+ .+|.++.+.+  +.+.+|..||.|.+|+...+     +.  ...+..+..+|+++.+..  ..|..
T Consensus        42 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~-----~~--~~~~~~~~~~v~~~~~s~~~~~l~~  114 (814)
T 3mkq_A           42 YETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG-----EK--VVDFEAHPDYIRSIAVHPTKPYVLS  114 (814)
T ss_dssp             TTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC-----CE--EEEEECCSSCEEEEEECSSSSEEEE
T ss_pred             CCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-----cE--EEEEecCCCCEEEEEEeCCCCEEEE
Confidence            3456777888754 7999999975  46999999999999987532     12  223333458999999974  46888


Q ss_pred             EeC-CeEEEEeCCCC-cEEEEEEecCCCCCceeEEEEeC-CE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         78 GYK-NKIHVVDPKSL-VVLKSFDAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        78 g~~-n~I~vid~~t~-~i~~~~~~h~~~~~~I~~m~~~~-~~-vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |+. +.|.+||.++. ...+.+.+|..   .|.++.+++ ++ .+++++.|+.|++||..+.+....+..
T Consensus       115 ~~~dg~i~vw~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~  181 (814)
T 3mkq_A          115 GSDDLTVKLWNWENNWALEQTFEGHEH---FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT  181 (814)
T ss_dssp             EETTSEEEEEEGGGTSEEEEEEECCSS---CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred             EcCCCEEEEEECCCCceEEEEEcCCCC---cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence            875 68999999987 78888998864   899999997 44 688999999999999988777766643

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.02  E-value=4.7e-09  Score=82.95  Aligned_cols=121  Identities=12%  Similarity=0.190  Sum_probs=92.7

Q ss_pred             CCCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC----CCCceEEEeeeC---CEEEEEeCC--
Q psy16020         14 ILDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAVY---NKVWCGYKN--   81 (151)
Q Consensus        14 l~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~----~~~pV~~m~~v~---~~Lw~g~~n--   81 (151)
                      ..+.|.++.+.++   .+++|..||.|.+|+....     +....+....    +..+|+++.+..   ..+.+|+.+  
T Consensus       164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  238 (416)
T 2pm9_A          164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-----KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN  238 (416)
T ss_dssp             SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-----EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred             CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-----CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence            3478999999754   6888899999999987531     1112222221    048999999974   357777754  


Q ss_pred             --eEEEEeCCCC-cEEEEEE-ecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         82 --KIHVVDPKSL-VVLKSFD-AHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        82 --~I~vid~~t~-~i~~~~~-~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                        .|++||.+++ +..+.+. +|..   .|.++.+++  ...+++++.|+.|++||.++.+++..+.
T Consensus       239 ~~~i~~~d~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~  302 (416)
T 2pm9_A          239 DPSILIWDLRNANTPLQTLNQGHQK---GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP  302 (416)
T ss_dssp             SCCCCEEETTSTTSCSBCCCSCCSS---CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred             CceEEEEeCCCCCCCcEEeecCccC---ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence              8999999987 6777787 8864   899999985  4458899999999999999999988875

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.01  E-value=2.8e-08  Score=76.63  Aligned_cols=129  Identities=7%  Similarity=0.091  Sum_probs=94.3

Q ss_pred             eCCCceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--------CCEEEEEe
Q psy16020         13 KILDTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--------YNKVWCGY   79 (151)
Q Consensus        13 ~l~~~V~~i~~~~-----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--------~~~Lw~g~   79 (151)
                      .-+++|.++.+.+     +.+++|..||.|.+|+.....    ....  .+..+..+|+++...        ++.|..|+
T Consensus        63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~--~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~  136 (357)
T 3i2n_A           63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE----MPVY--SVKGHKEIINAIDGIGGLGIGEGAPEIVTGS  136 (357)
T ss_dssp             EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS----SCSE--EECCCSSCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred             cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC----ccEE--EEEecccceEEEeeccccccCCCccEEEEEe
Confidence            4457999999975     568999999999999876322    0222  333445999999653        35788877


Q ss_pred             C-CeEEEEeCCCCc-EEEEEEecCCC-CCceeEEEE----e-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         80 K-NKIHVVDPKSLV-VLKSFDAHPRR-ESQVRQMTW----A-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        80 ~-n~I~vid~~t~~-i~~~~~~h~~~-~~~I~~m~~----~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      . +.|++||.++++ ..+.+..|... ...|.++.+    + ....+++++.|+.|++||.++.+..........+
T Consensus       137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v  212 (357)
T 3i2n_A          137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV  212 (357)
T ss_dssp             TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE
T ss_pred             CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCce
Confidence            5 689999999987 78888876542 347888883    3 3345788999999999999998887666544443

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.01  E-value=2.5e-09  Score=83.97  Aligned_cols=120  Identities=15%  Similarity=0.125  Sum_probs=85.7

Q ss_pred             ceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020          7 TPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-   80 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-   80 (151)
                      +++..++-+ ++|.++.+.+  +++++|..||+|.+|+...+..|    .....+..+..+|+++.+..  +.|.+|+. 
T Consensus        46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  121 (377)
T 3dwl_C           46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW----KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA  121 (377)
T ss_dssp             EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC----CCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred             EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce----eeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence            455566543 7999999975  47889999999999987643312    12344545569999999974  56777775 


Q ss_pred             CeEEEEeCCCCc---EEEEEEe-cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCC
Q psy16020         81 NKIHVVDPKSLV---VLKSFDA-HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        81 n~I~vid~~t~~---i~~~~~~-h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~  133 (151)
                      +.|++||.++.+   +.+.+.. |..   .|.++.+++++ .+++++.|+.|++||.+
T Consensus       122 ~~i~iwd~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  176 (377)
T 3dwl_C          122 RVISVCYFEQENDWWVSKHLKRPLRS---TILSLDWHPNNVLLAAGCADRKAYVLSAY  176 (377)
T ss_dssp             SCEEECCC-----CCCCEEECSSCCS---CEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred             CeEEEEEECCcccceeeeEeecccCC---CeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence            689999999887   5788887 764   89999999765 58899999999999985

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=98.99  E-value=2.4e-08  Score=78.62  Aligned_cols=114  Identities=17%  Similarity=0.226  Sum_probs=87.7

Q ss_pred             CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCC
Q psy16020         15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK   89 (151)
Q Consensus        15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~   89 (151)
                      .++|.++.+.+  +++++|..||++.+|+...+.     ......+..+..+|+++.+..  +.|..|+. +.|++||.+
T Consensus        61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~  135 (345)
T 3fm0_A           61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD  135 (345)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred             CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence            36899999875  478999999999999875321     112335555669999999973  56777774 689999988


Q ss_pred             CC---cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         90 SL---VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        90 t~---~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                      +.   +....+.+|..   .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus       136 ~~~~~~~~~~~~~h~~---~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~  183 (345)
T 3fm0_A          136 EEDEYECVSVLNSHTQ---DVKHVVWHPSQELLASASYDDTVKLYREEEDD  183 (345)
T ss_dssp             TTSCEEEEEEECCCCS---CEEEEEECSSSSCEEEEETTSCEEEEEEETTE
T ss_pred             CCCCeEEEEEecCcCC---CeEEEEECCCCCEEEEEeCCCcEEEEEecCCC
Confidence            75   45667778865   89999999765 48899999999999998764

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=98.98  E-value=9.1e-08  Score=72.71  Aligned_cols=109  Identities=15%  Similarity=0.192  Sum_probs=85.0

Q ss_pred             eeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEE
Q psy16020         19 LPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLK   95 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~   95 (151)
                      .+|.+..+.+++...||+|.+|+...+     +..+.+++..+..+|+|+.+..  +.|..|+. +.|++||.++++..+
T Consensus        29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg-----~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~  103 (318)
T 4ggc_A           29 NLVDWSSGNVLAVALDNSVYLWSASSG-----DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR  103 (318)
T ss_dssp             BCEEECTTSEEEEEETTEEEEEETTTC-----CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             eEEEECCCCEEEEEeCCEEEEEECCCC-----CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence            446676666666666999999986521     2334566666668999999974  56888875 689999999999999


Q ss_pred             EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020         96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      ++.+|+.   .+.++...+.. .++++.++.+++|+..+..
T Consensus       104 ~~~~h~~---~~~~~~~~~~~-l~s~~~~~~~~~~~~~~~~  140 (318)
T 4ggc_A          104 NMTSHSA---RVGSLSWNSYI-LSSGSRSGHIHHHDVRVAE  140 (318)
T ss_dssp             EEECCSS---CEEEEEEETTE-EEEEETTSEEEEEETTSSS
T ss_pred             EecCccc---eEEEeecCCCE-EEEEecCCceEeeecCCCc
Confidence            9999975   78888877664 7799999999999998743

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=98.98  E-value=3.2e-09  Score=83.38  Aligned_cols=122  Identities=11%  Similarity=0.062  Sum_probs=88.3

Q ss_pred             CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeC
Q psy16020         14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~   88 (151)
                      ..+.|.++.+.+  +.+++|..||+|.+|+...+..|..  ...+.- .+..+|+++.+..  +.|.+|+. +.|++||.
T Consensus        99 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  175 (377)
T 3dwl_C           99 LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV--SKHLKR-PLRSTILSLDWHPNNVLLAAGCADRKAYVLSA  175 (377)
T ss_dssp             CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC--CEEECS-SCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred             cCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee--eeEeec-ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence            447999999874  4799999999999998765443322  222222 1459999999974  46887775 68999998


Q ss_pred             C------------------CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce----eeeEe
Q psy16020         89 K------------------SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH----LQDVD  142 (151)
Q Consensus        89 ~------------------t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~----l~~id  142 (151)
                      +                  +++..+++ .|..   .|.++.+++++- +++++.|+.|++||.++.+.    ++.+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  248 (377)
T 3dwl_C          176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG---WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK  248 (377)
T ss_dssp             CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS---SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred             EecccCCCccccccccccchhhhhhcc-cCCc---eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence            5                  45566677 6754   899999997764 88999999999999999877    55553

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.97  E-value=1.1e-08  Score=89.04  Aligned_cols=115  Identities=12%  Similarity=0.054  Sum_probs=89.4

Q ss_pred             CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee----CCEEEEEeC-CeEEEEe
Q psy16020         15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK-NKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v----~~~Lw~g~~-n~I~vid   87 (151)
                      .++|.++.+.+  +.+++|..||+|.+|+... +.    ......+..+..+|++|.+.    ++.|..|+. +.|++||
T Consensus         9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~-~~----~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A            9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEG-ET----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   83 (753)
T ss_dssp             CCCEEEECCCSSSCCEEEEETTTEEEEEEEET-TE----EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred             cceeEEEEECCCCCeEEEEECCCcEEEEecCC-CC----CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence            37899998864  4699999999999998742 11    11223455556999999996    456877774 6899999


Q ss_pred             CCCCc--EEEEEEecCCCCCceeEEEEeCC---EEEEEEcCCCeEEEEeCCccce
Q psy16020         88 PKSLV--VLKSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        88 ~~t~~--i~~~~~~h~~~~~~I~~m~~~~~---~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      .++++  ....+.+|..   .|+++.++++   ..+++++.|+.|++||.++.+.
T Consensus        84 ~~~~~~~~~~~~~~h~~---~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~  135 (753)
T 3jro_A           84 EENGRWSQIAVHAVHSA---SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT  135 (753)
T ss_dssp             EETTEEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred             CCCCcccccccccCCCC---CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence            99987  6677777864   8999999975   4689999999999999987643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=98.97  E-value=2.1e-08  Score=80.03  Aligned_cols=130  Identities=14%  Similarity=0.142  Sum_probs=96.6

Q ss_pred             ceeeeeeCCCceeeeEEeC-CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEE---eCCCCCceEEEeee-CCEEEEEe-
Q psy16020          7 TPYPLNKILDTALPPVHVQ-GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT---LGLPHHSVRSLAAV-YNKVWCGY-   79 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~-~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~---l~~~~~pV~~m~~v-~~~Lw~g~-   79 (151)
                      +.+..++.+..+.++.+.+ ++++++. .+|+|.+|+...+.     ....+.   +..+..+|.++.+. ++++|+++ 
T Consensus       114 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~  188 (433)
T 3bws_A          114 RFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQ-----TVRLSPPEKYKKKLGFVETISIPEHNELWVSQM  188 (433)
T ss_dssp             EEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCC-----EEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG
T ss_pred             eEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCe-----EeeecCcccccccCCceeEEEEcCCCEEEEEEC
Confidence            6677778888888998874 4566555 46789999875321     111111   11334789999985 47777666 


Q ss_pred             -CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         80 -KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        80 -~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                       ++.|++||+++++...++..|..   .+.++.+++++  ++++...|+.|++||.++.+.+..+...
T Consensus       189 ~d~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~  253 (433)
T 3bws_A          189 QANAVHVFDLKTLAYKATVDLTGK---WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI  253 (433)
T ss_dssp             GGTEEEEEETTTCCEEEEEECSSS---SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred             CCCEEEEEECCCceEEEEEcCCCC---CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence             37999999999999999998764   89999999654  6778889999999999999888877543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=98.97  E-value=3.4e-09  Score=82.56  Aligned_cols=120  Identities=15%  Similarity=0.232  Sum_probs=86.8

Q ss_pred             eeeeee-CCCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----------
Q psy16020          8 PYPLNK-ILDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----------   72 (151)
Q Consensus         8 ~l~~i~-l~~~V~~i~~~~~----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----------   72 (151)
                      ++..++ ..++|.++.+.++    .+.+|..||+|.+|+....+.|+...    .+..+..+|+++.+..          
T Consensus        95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~~  170 (316)
T 3bg1_A           95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK----INNAHTIGCNAVSWAPAVVPGSLIDH  170 (316)
T ss_dssp             EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC----BTTSSSSCBCCCEECCCCCC------
T ss_pred             EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee----eeccccCCcceEEEccccCCcccccc
Confidence            344443 3368999999763    68889999999999987544442110    1222346777776643          


Q ss_pred             ---------CEEEEEe-CCeEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeCC-----EEEEEEcCCCeEEEEeCCc
Q psy16020         73 ---------NKVWCGY-KNKIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        73 ---------~~Lw~g~-~n~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~~-----~vwis~~~d~~l~lwd~~t  134 (151)
                               ..|..|+ ++.|++||.++.   +..+++.+|++   .|.++.++++     ..++|++.|++|++||.++
T Consensus       171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~---~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD---WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS---CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred             ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC---ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence                     2466666 468999998754   56778889975   8999999876     4689999999999999876

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.96  E-value=7.6e-08  Score=78.13  Aligned_cols=124  Identities=14%  Similarity=-0.004  Sum_probs=90.9

Q ss_pred             CCceeeeEEeCC-----eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC-CeEEEEe
Q psy16020         15 LDTALPPVHVQG-----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~~~-----~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid   87 (151)
                      .+.|.++.+.++     .+++|..||+|.+|+....     .....+ +..+..+|+++.+. ++.|+.|+. +.|++||
T Consensus       195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-----~~~~~~-~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd  268 (450)
T 2vdu_B          195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-----FIVDKW-LFGHKHFVSSICCGKDYLLLSAGGDDKIFAWD  268 (450)
T ss_dssp             SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-----TCEEEE-CCCCSSCEEEEEECSTTEEEEEESSSEEEEEE
T ss_pred             cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-----ceeeee-ecCCCCceEEEEECCCCEEEEEeCCCeEEEEE
Confidence            378999998875     7999999999999987532     111121 32345899999997 456877774 6999999


Q ss_pred             CCCCcEEEEEEecC----------------------CCCCceeEEEEeCC--EEEEEEcCCCeEEEEeC--Ccc---cee
Q psy16020         88 PKSLVVLKSFDAHP----------------------RRESQVRQMTWAGD--GVWVSIRLDSTLRMYNA--HTY---QHL  138 (151)
Q Consensus        88 ~~t~~i~~~~~~h~----------------------~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~--~t~---~~l  138 (151)
                      ..+++..+++..+.                      .....|..+.+.++  .+.++.+.++.|++||.  .+.   +.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~  348 (450)
T 2vdu_B          269 WKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALK  348 (450)
T ss_dssp             TTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEE
T ss_pred             CCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeec
Confidence            99999999998552                      22346888888854  44444448999999999  554   777


Q ss_pred             eeEeCC
Q psy16020        139 QDVDIE  144 (151)
Q Consensus       139 ~~idi~  144 (151)
                      +.+...
T Consensus       349 ~~~~~~  354 (450)
T 2vdu_B          349 QIITFP  354 (450)
T ss_dssp             EEEECS
T ss_pred             cEeccC
Confidence            777544

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.96  E-value=2.6e-08  Score=80.72  Aligned_cols=128  Identities=12%  Similarity=0.073  Sum_probs=93.2

Q ss_pred             eeeeeCCCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCC-----CCCCcceEEEeCCCCCceEEEeeeC--C-EEEE
Q psy16020          9 YPLNKILDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQ-----WDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWC   77 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~-----wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~   77 (151)
                      ...+..++.|.+|.+.+.   .+++|..+|.|.+|+......     -.......+.  .+..+|.++....  . .|.+
T Consensus       122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s  199 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGYLLS  199 (430)
T ss_dssp             EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTEEEE
T ss_pred             EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCeEEE
Confidence            455667789999999874   577888899999999864110     0012223333  3458999999974  3 6777


Q ss_pred             Ee-CCeEEEEeCCCCc----E---EEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCcc---ceeeeE
Q psy16020         78 GY-KNKIHVVDPKSLV----V---LKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTY---QHLQDV  141 (151)
Q Consensus        78 g~-~n~I~vid~~t~~----i---~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~---~~l~~i  141 (151)
                      |+ ++.|++||..+..    .   .+.+.+|..   .|+++.+++  ..++++++.|+.|++||.++.   +.+..+
T Consensus       200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~  273 (430)
T 2xyi_A          200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTA---VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV  273 (430)
T ss_dssp             ECTTSCEEEEETTSCCBGGGEEECSEEECCCSS---CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred             EeCCCeEEEEeCCCCCCCCceeccceeecCCCC---CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence            77 4689999998732    2   456777764   899999985  567889999999999999986   455554

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.95  E-value=1.9e-07  Score=73.47  Aligned_cols=125  Identities=14%  Similarity=0.128  Sum_probs=95.9

Q ss_pred             CCCceeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEe--CCeEEEEeCC
Q psy16020         14 ILDTALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGY--KNKIHVVDPK   89 (151)
Q Consensus        14 l~~~V~~i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~--~n~I~vid~~   89 (151)
                      |.+.+.+|...++++|++.. +|.|.+++...     .+....++.+   ...+.|++ .+++||++.  ++.|++||++
T Consensus        42 lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t-----~~~~~~i~~~---~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~  113 (328)
T 3dsm_A           42 LGDVAQSMVIRDGIGWIVVNNSHVIFAIDINT-----FKEVGRITGF---TSPRYIHFLSDEKAYVTQIWDYRIFIINPK  113 (328)
T ss_dssp             CBSCEEEEEEETTEEEEEEGGGTEEEEEETTT-----CCEEEEEECC---SSEEEEEEEETTEEEEEEBSCSEEEEEETT
T ss_pred             cCccceEEEEECCEEEEEEcCCCEEEEEECcc-----cEEEEEcCCC---CCCcEEEEeCCCeEEEEECCCCeEEEEECC
Confidence            44667888888999999987 48899998752     2233445433   45578888 678999998  5799999999


Q ss_pred             CCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEc-CCCeEEEEeCCccceeeeEeCCcc
Q psy16020         90 SLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        90 t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~-~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      |+++.+++.....  .......|+..+..+|++.. .++.|.+||..+.+.++.|.....
T Consensus       114 t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~  173 (328)
T 3dsm_A          114 TYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ  173 (328)
T ss_dssp             TTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC
T ss_pred             CCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC
Confidence            9999999986541  01145567778889999987 599999999999999999976543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=98.95  E-value=1.7e-08  Score=80.06  Aligned_cols=114  Identities=13%  Similarity=0.142  Sum_probs=76.0

Q ss_pred             eeeeEEeCCeE-EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCe--------------
Q psy16020         18 ALPPVHVQGRV-VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNK--------------   82 (151)
Q Consensus        18 V~~i~~~~~~v-~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~--------------   82 (151)
                      +.++.+..+.+ ++|..+|+|.+|+...+     +....+.   ...+|+++.+..+.+.++.+++              
T Consensus        63 ~~~~~~~~~~~~~~~~~d~~v~iWd~~~~-----~~~~~~~---~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~  134 (355)
T 3vu4_A           63 KVRMLHRTNYVAFVTGVKEVVHIWDDVKK-----QDVSRIK---VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRIT  134 (355)
T ss_dssp             EEEECTTSSEEEEECSSTTEEEEEETTTT-----EEEEEEE---CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSS
T ss_pred             EEEEcCCCCEEEEEECCccEEEEEECCCC-----cEEEEEE---CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeE
Confidence            33444445555 66788899999986521     1112222   1257777777665555544444              


Q ss_pred             --------------------------EEEEeCCCCc----------------EEEEEEecCCCCCceeEEEEeCCEE-EE
Q psy16020         83 --------------------------IHVVDPKSLV----------------VLKSFDAHPRRESQVRQMTWAGDGV-WV  119 (151)
Q Consensus        83 --------------------------I~vid~~t~~----------------i~~~~~~h~~~~~~I~~m~~~~~~v-wi  119 (151)
                                                |++||.++++                ..+.+.+|..   .|+++.+++++- ++
T Consensus       135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~---~v~~~~~s~~g~~l~  211 (355)
T 3vu4_A          135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN---PIKMVRLNRKSDMVA  211 (355)
T ss_dssp             CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSS---CEEEEEECTTSSEEE
T ss_pred             EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC---ceEEEEECCCCCEEE
Confidence                                      5555544433                1566788864   899999997764 88


Q ss_pred             EEcCCCe-EEEEeCCccceeeeEe
Q psy16020        120 SIRLDST-LRMYNAHTYQHLQDVD  142 (151)
Q Consensus       120 s~~~d~~-l~lwd~~t~~~l~~id  142 (151)
                      |++.|++ |++||.++++++..+.
T Consensus       212 s~s~d~~~v~iwd~~~~~~~~~~~  235 (355)
T 3vu4_A          212 TCSQDGTIIRVFKTEDGVLVREFR  235 (355)
T ss_dssp             EEETTCSEEEEEETTTCCEEEEEE
T ss_pred             EEeCCCCEEEEEECCCCcEEEEEE
Confidence            9999998 9999999999999886

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=98.93  E-value=8.5e-09  Score=83.58  Aligned_cols=117  Identities=9%  Similarity=0.049  Sum_probs=86.3

Q ss_pred             CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC--CEEEEEeC-CeEEEEe
Q psy16020         15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY--NKVWCGYK-NKIHVVD   87 (151)
Q Consensus        15 ~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid   87 (151)
                      .++|.+|.+.+   +.++.|..||+|.+|+...      .....+.-. ....++.++.+..  ..|.+|+. +.|++||
T Consensus       164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd  237 (435)
T 4e54_B          164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG------NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN  237 (435)
T ss_dssp             SCCCCEEEECSSCTTEEEEECSSSCEEEEETTS------CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred             CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC------CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence            37999999863   4799999999999998642      122222222 2235678888864  56888875 6899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .++ +...++.+|..   .|+++.++++  .+.++++.|+.|++||.++.+....+
T Consensus       238 ~~~-~~~~~~~~h~~---~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~  289 (435)
T 4e54_B          238 MDG-KELWNLRMHKK---KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF  289 (435)
T ss_dssp             SSS-CBCCCSBCCSS---CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred             cCc-ceeEEEecccc---eEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence            875 44567888875   8999999854  47889999999999999886654443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.93  E-value=7.4e-08  Score=75.82  Aligned_cols=132  Identities=10%  Similarity=0.014  Sum_probs=99.7

Q ss_pred             CCCCceeeeeeCCCceeeeEE-eCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCC---CceEEEeeeCCEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVH-VQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSVRSLAAVYNKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~-~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~---~pV~~m~~v~~~Lw~   77 (151)
                      ..+.+.++++.....+..|.. .++++|++. .+|.|.+|+...     .+....++++...   .....|++.+++||+
T Consensus        71 ~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-----~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv  145 (328)
T 3dsm_A           71 INTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-----YEITGYIECPDMDMESGSTEQMVQYGKYVYV  145 (328)
T ss_dssp             TTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT-----TEEEEEEECTTCCTTTCBCCCEEEETTEEEE
T ss_pred             CcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC-----CeEEEEEEcCCccccCCCcceEEEECCEEEE
Confidence            345677788876677888888 778999998 789999998752     1233456665410   134567778899999


Q ss_pred             Ee---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCC----------CeEEEEeCCccceeeeEeC
Q psy16020         78 GY---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLD----------STLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        78 g~---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d----------~~l~lwd~~t~~~l~~idi  143 (151)
                      +.   ++.|.+||++|+++++++....    ....+..+++ .+|++...+          +.|.++|..+++..+.+++
T Consensus       146 ~~~~~~~~v~viD~~t~~~~~~i~~g~----~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~  221 (328)
T 3dsm_A          146 NCWSYQNRILKIDTETDKVVDELTIGI----QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF  221 (328)
T ss_dssp             EECTTCCEEEEEETTTTEEEEEEECSS----CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred             EcCCCCCEEEEEECCCCeEEEEEEcCC----CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence            96   4689999999999999998643    4567777764 468887765          8999999999999988876

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=98.93  E-value=8.1e-08  Score=77.31  Aligned_cols=106  Identities=15%  Similarity=0.226  Sum_probs=83.1

Q ss_pred             eEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCCcEEEE
Q psy16020         21 PVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLVVLKS   96 (151)
Q Consensus        21 i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~~i~~~   96 (151)
                      |-+.. |.|-||+ |++|.+|+...+     +..+.+++..+..+|+|+.+..  +.|.+|+. +.|.+||.++++..++
T Consensus       111 l~wS~~n~lAvgl-d~tV~lWd~~tg-----~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~  184 (420)
T 4gga_A          111 VDWSSGNVLAVAL-DNSVYLWSASSG-----DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  184 (420)
T ss_dssp             EEECTTSEEEEEE-TTEEEEEETTTC-----CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             EEECCCCEEEEEe-CCEEEEEECCCC-----CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence            44443 4566666 999999987532     2334566666668999999974  56888885 6899999999999999


Q ss_pred             EEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020         97 FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        97 ~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      +.+|+.   .+.++...+. +.++++.|+.+++||..+..
T Consensus       185 ~~~h~~---~v~~~s~~~~-~l~sgs~d~~i~~~d~~~~~  220 (420)
T 4gga_A          185 MTSHSA---RVGSLSWNSY-ILSSGSRSGHIHHHDVRVAE  220 (420)
T ss_dssp             ECCCSS---CEEEEEEETT-EEEEEETTSEEEEEETTSSS
T ss_pred             EeCCCC---ceEEEeeCCC-EEEEEeCCCceeEeeecccc
Confidence            999975   8999988765 47799999999999988633

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=98.92  E-value=2.6e-07  Score=73.61  Aligned_cols=131  Identities=8%  Similarity=0.060  Sum_probs=96.8

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC   77 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~   77 (151)
                      .+.++++.++.+ ..+.++.+.+  +.+|++. .+|.|.+|+...        .+.+..-.....+.++.+.  ++.||+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~--------~~~~~~~~~~~~~~~~~~~~~g~~l~~  270 (433)
T 3bws_A          199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT--------KLEIRKTDKIGLPRGLLLSKDGKELYI  270 (433)
T ss_dssp             TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT--------TEEEEECCCCSEEEEEEECTTSSEEEE
T ss_pred             CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC--------CcEEEEecCCCCceEEEEcCCCCEEEE
Confidence            455677777754 6899998875  3587666 689999998742        1222222223668888886  357998


Q ss_pred             Ee---------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         78 GY---------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        78 g~---------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      ++         ++.|++||+.+++....+. |..   .+..+.++++  .++++...++.|++||..+.+.++.+.....
T Consensus       271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~---~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~  346 (433)
T 3bws_A          271 AQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPG---NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDK  346 (433)
T ss_dssp             EEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEE---CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred             EECCCCccccCCCeEEEEECCCCcEEeecc-CCC---CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCC
Confidence            87         3589999999999888775 432   7888888865  4789999999999999999998888865433

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.92  E-value=3.6e-08  Score=85.88  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=92.6

Q ss_pred             eeeeee-CCCceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC----------
Q psy16020          8 PYPLNK-ILDTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----------   72 (151)
Q Consensus         8 ~l~~i~-l~~~V~~i~~~~----~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~----------   72 (151)
                      ++..+. ..++|.++.+.+    +.+++|..||+|.+|+......     .....+..+..+|+++.+..          
T Consensus        91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-----~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~  165 (753)
T 3jro_A           91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIEEDGEHN  165 (753)
T ss_dssp             EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-----CCCEEEECCSSCEEEEEECCCC--------
T ss_pred             ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-----cceeEeecCCCceEEEEecCcccccccccc
Confidence            444444 337999999974    4799999999999999864321     12223333458999999864          


Q ss_pred             -----CEEEEEeC-CeEEEEeCCCC----cEEEEEEecCCCCCceeEEEEeCC----EEEEEEcCCCeEEEEeCCccc
Q psy16020         73 -----NKVWCGYK-NKIHVVDPKSL----VVLKSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        73 -----~~Lw~g~~-n~I~vid~~t~----~i~~~~~~h~~~~~~I~~m~~~~~----~vwis~~~d~~l~lwd~~t~~  136 (151)
                           +.+.+|+. +.|++||..++    ++..++.+|..   .|+++.++++    ...++++.|+.|++||.++.+
T Consensus       166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~---~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~  240 (753)
T 3jro_A          166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD---WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ  240 (753)
T ss_dssp             -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS---CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred             cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC---cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence                 45777774 68999998876    67778888875   8999999976    568999999999999999864

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=98.91  E-value=3.1e-08  Score=88.33  Aligned_cols=126  Identities=15%  Similarity=0.028  Sum_probs=94.5

Q ss_pred             CceeeeeeCCCceeeeEEeCCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-C
Q psy16020          6 PTPYPLNKILDTALPPVHVQGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-N   81 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n   81 (151)
                      .+++....-.++|.+|.+.+++ ++.|..||+|.+|+...+     +....+.   +..+|+++.+.  ++.|.+|+. +
T Consensus        49 ~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~-----~~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg  120 (902)
T 2oaj_A           49 VEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQ-----KVLTTVF---VPGKITSIDTDASLDWMLIGLQNG  120 (902)
T ss_dssp             CEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTC-----SEEEEEE---CSSCEEEEECCTTCSEEEEEETTS
T ss_pred             cEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCC-----cEEEEEc---CCCCEEEEEECCCCCEEEEEcCCC
Confidence            3444444445799999998776 888999999999987532     1222232   23789999997  367888885 6


Q ss_pred             eEEEEeCCCCcEE-----------EEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         82 KIHVVDPKSLVVL-----------KSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        82 ~I~vid~~t~~i~-----------~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      .|++||.++++..           ..+.+|.   ..|.+++++++  +..++++.|+.+ +||.++.++++.+..
T Consensus       121 ~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~---~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~  191 (902)
T 2oaj_A          121 SMIVYDIDRDQLSSFKLDNLQKSSFFPAARL---SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIY  191 (902)
T ss_dssp             CEEEEETTTTEEEEEEECCHHHHHTCSSSCC---CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECC
T ss_pred             cEEEEECCCCccccceeccccccccccccCC---CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEec
Confidence            8999999998864           1123454   48999999985  568899999999 999999988877753

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.91  E-value=2.5e-08  Score=84.22  Aligned_cols=118  Identities=14%  Similarity=0.103  Sum_probs=88.3

Q ss_pred             CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcc-eEEEeCCCCCceEEEe--eeC-C-E-EEEEe-CCeEEEEe
Q psy16020         16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKY-HTVTLGLPHHSVRSLA--AVY-N-K-VWCGY-KNKIHVVD   87 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~-~~i~l~~~~~pV~~m~--~v~-~-~-Lw~g~-~n~I~vid   87 (151)
                      .+|.++.+. ++.+.+|..||+|.+|+....     ..+ ..+..  +..+|+++.  +.. + + |..|+ +++|++||
T Consensus       267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~-----~~~~~~~~~--H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD  339 (524)
T 2j04_B          267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDP-----EVPSFYDQV--HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN  339 (524)
T ss_dssp             TCEEEEEESSSSEEEEEETTSEEEEEETTBC-----SSCSEEEEC--SSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred             CCEEEEEecCCCeEEEEeCCCEEEEEECCCC-----CCceEEeec--ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence            689999885 468999999999999998532     122 22333  349999994  343 3 4 56565 46899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      .++++..+++.+|.. ...|.++++++++ .+++++.|.+|++||.++++++..+
T Consensus       340 ~~~~~~~~~~~~~~~-~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l  393 (524)
T 2j04_B          340 PKDIATTKTTVSRFR-GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL  393 (524)
T ss_dssp             GGGHHHHCEEEEECS-CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE
T ss_pred             CCCCCcccccccccc-cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee
Confidence            999998888888863 2347889999754 5889999999999999987765443

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.90  E-value=3.2e-07  Score=70.86  Aligned_cols=130  Identities=11%  Similarity=0.017  Sum_probs=100.9

Q ss_pred             CCCCceeeeeeCCCc--eeeeEEeCCeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeCCEEE
Q psy16020          3 YPHPTPYPLNKILDT--ALPPVHVQGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVW   76 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~--V~~i~~~~~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw   76 (151)
                      .-.++.+.++..+..  ..-|.|.++++|++.+.   ..|.+++...+     +....+++..  .+- -.+++.+++||
T Consensus         6 ~~~~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tg-----kv~~~~~l~~--~~fgeGi~~~~~~ly   78 (243)
T 3mbr_X            6 TQGYRVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETG-----RILQRAEVPP--PYFGAGIVAWRDRLI   78 (243)
T ss_dssp             BCCEEEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTC-----CEEEEEECCT--TCCEEEEEEETTEEE
T ss_pred             ccceEEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCC-----CEEEEEeCCC--CcceeEEEEeCCEEE
Confidence            345678888877744  55899999999999877   38999988632     3445566654  332 35677899999


Q ss_pred             EEe--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         77 CGY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        77 ~g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ...  .+.++|+|++|++.+++|.....   . -.+...+..+|+|- .++.|.++|+.|++.+..|.+.
T Consensus        79 ~ltw~~~~v~v~D~~tl~~~~ti~~~~~---G-wglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~  143 (243)
T 3mbr_X           79 QLTWRNHEGFVYDLATLTPRARFRYPGE---G-WALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVT  143 (243)
T ss_dssp             EEESSSSEEEEEETTTTEEEEEEECSSC---C-CEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred             EEEeeCCEEEEEECCcCcEEEEEeCCCC---c-eEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEc
Confidence            999  47999999999999999996532   2 34556777888886 5999999999999999999875

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=98.89  E-value=2.6e-07  Score=78.10  Aligned_cols=137  Identities=10%  Similarity=0.093  Sum_probs=102.3

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-----C-CE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-----Y-NK   74 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-----~-~~   74 (151)
                      ..+.++++.++....+.++.+.+  +++|++..+|+|.+|+....   +.+....++.+.   ..+.+++.     + +.
T Consensus       166 ~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~---t~~~~~~i~~g~---~p~~va~sp~~~~dg~~  239 (543)
T 1nir_A          166 GDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK---EPTKVAEIKIGI---EARSVESSKFKGYEDRY  239 (543)
T ss_dssp             TTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCEEEEEEECCS---EEEEEEECCSTTCTTTE
T ss_pred             CCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCC---CCcEEEEEecCC---CcceEEeCCCcCCCCCE
Confidence            45678899998876788887764  47999999999999997210   123334566553   45888886     3 56


Q ss_pred             EEEEe--CCeEEEEeCCCCcEEEEEEecCC--------CCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceee--e
Q psy16020         75 VWCGY--KNKIHVVDPKSLVVLKSFDAHPR--------RESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQ--D  140 (151)
Q Consensus        75 Lw~g~--~n~I~vid~~t~~i~~~~~~h~~--------~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~--~  140 (151)
                      ||+++  .+.|.|||..|+++.+++..+..        .+..+..+..++  ..++++.+.++.|.+||..+.+.++  .
T Consensus       240 l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~  319 (543)
T 1nir_A          240 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS  319 (543)
T ss_dssp             EEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEE
T ss_pred             EEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEE
Confidence            99998  47999999999999999986421        123688888884  4568899999999999999876655  5


Q ss_pred             EeCCc
Q psy16020        141 VDIEP  145 (151)
Q Consensus       141 idi~~  145 (151)
                      |+...
T Consensus       320 i~~~~  324 (543)
T 1nir_A          320 IGAAP  324 (543)
T ss_dssp             EECCS
T ss_pred             eccCc
Confidence            55433

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.87  E-value=2.9e-08  Score=79.28  Aligned_cols=123  Identities=12%  Similarity=0.179  Sum_probs=88.6

Q ss_pred             CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC------------ceEEEeeeC--CEEE
Q psy16020         14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH------------SVRSLAAVY--NKVW   76 (151)
Q Consensus        14 l~~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~------------pV~~m~~v~--~~Lw   76 (151)
                      ..+.|.++.+.+   +.+++|..||+|.+|+........ .....+.  .+..            +|+++.+..  ..|.
T Consensus       225 ~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  301 (447)
T 3dw8_B          225 LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD-RHSKLFE--EPEDPSNRSFFSEIISSISDVKFSHSGRYMM  301 (447)
T ss_dssp             CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC-TTCEEEC--CC-----CCHHHHHTTCEEEEEECTTSSEEE
T ss_pred             cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc-ceeeEec--cCCCccccccccccCceEEEEEECCCCCEEE
Confidence            346899999986   469999999999999976432110 1112222  2223            899999974  4677


Q ss_pred             EEeCCeEEEEeCCC-CcEEEEEEecCCCCC------------ceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceee
Q psy16020         77 CGYKNKIHVVDPKS-LVVLKSFDAHPRRES------------QVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        77 ~g~~n~I~vid~~t-~~i~~~~~~h~~~~~------------~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      +|+.+.|++||.++ ++..+++.+|.....            .+..+.+++++ .+++++.|+.|++||..+.+.+.
T Consensus       302 ~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~  378 (447)
T 3dw8_B          302 TRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT  378 (447)
T ss_dssp             EEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred             EeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence            77788999999997 899999999853111            13347787664 37899999999999999987763

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=98.87  E-value=6.1e-08  Score=77.81  Aligned_cols=109  Identities=6%  Similarity=0.026  Sum_probs=77.3

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCCCCCceEEEeee---------CCE-EEEEe-CCeEEEEeCCCCcEE
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAV---------YNK-VWCGY-KNKIHVVDPKSLVVL   94 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~~pV~~m~~v---------~~~-Lw~g~-~n~I~vid~~t~~i~   94 (151)
                      .+..|..||+|.+|+...+.   ......+ .+..+..+|+++.+.         +++ |..|+ +++|++||.++.+..
T Consensus       103 ~las~~~d~~v~lw~~~~~~---~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~  179 (393)
T 4gq1_A          103 FLACVCQDNTVRLIITKNET---IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI  179 (393)
T ss_dssp             EEEEEETTSCEEEEEEETTE---EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred             EEEEEeCCCcEEEEECCCCc---cceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence            47778889999999875321   0011111 133456999999996         344 55444 468999999988877


Q ss_pred             EEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         95 KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        95 ~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ..+..|..   .|.++.+.+++  .+++++.|++|++||.++.+...+.
T Consensus       180 ~~~~~~~~---~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~  225 (393)
T 4gq1_A          180 LAGYPLSS---PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN  225 (393)
T ss_dssp             EEEEECSS---CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred             eeecCCCC---CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence            77777864   89999999765  5899999999999999988766554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.85  E-value=4e-07  Score=71.16  Aligned_cols=135  Identities=13%  Similarity=0.147  Sum_probs=104.7

Q ss_pred             CCCCceeeeeeCCCcee--eeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          3 YPHPTPYPLNKILDTAL--PPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~--~i~~~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      ..+.+.+.++.+++..+  -+...++++|++.- +|.+.+|+..     +++....++.+ ...+.. +..-+++||++.
T Consensus        51 ~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~-----t~~v~~~i~~g-~~~g~g-lt~Dg~~l~vs~  123 (266)
T 2iwa_A           51 LQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR-----TLSNIKNFTHQ-MKDGWG-LATDGKILYGSD  123 (266)
T ss_dssp             TTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT-----TTEEEEEEECC-SSSCCE-EEECSSSEEEEC
T ss_pred             CCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC-----CCcEEEEEECC-CCCeEE-EEECCCEEEEEC
Confidence            45778889998886433  45667889999874 5789999875     34455667777 124432 455567899988


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCC--CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~--~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      + ++|+++|++|+++.+++.+..+  +...++.|.+.+..+|++...++.|.+-|+.|++.++.|++.
T Consensus       124 gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~  191 (266)
T 2iwa_A          124 GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLP  191 (266)
T ss_dssp             SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred             CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence            6 6999999999999999997643  122478888887778999999999999999999999999975

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=98.85  E-value=1.2e-07  Score=76.94  Aligned_cols=56  Identities=11%  Similarity=0.088  Sum_probs=44.5

Q ss_pred             EEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC
Q psy16020         75 VWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA  132 (151)
Q Consensus        75 Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~  132 (151)
                      +..|+ +++|++||..++++.+++++|++  ..+..++++++|- ++|++.|++||+||.
T Consensus       298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~--~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          298 AAAILTSGTIAIWDLLLGQCTALLPPVSD--QHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEEEETTSCEEEEETTTCSEEEEECCC----CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EEEEcCCCcEEEEECCCCcEEEEecCCCC--CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            34444 56899999999999999999975  2345688998764 789999999999995

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=98.85  E-value=3.4e-07  Score=70.62  Aligned_cols=132  Identities=12%  Similarity=0.100  Sum_probs=97.9

Q ss_pred             CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEEEeee--CCEEE
Q psy16020          4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAV--YNKVW   76 (151)
Q Consensus         4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~m~~v--~~~Lw   76 (151)
                      .+.+.++.++. ...+.++.+.+  +++|++..+|.|.+|+...+     +....+..+.  +...+..+.+.  ++.||
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~  246 (353)
T 3vgz_A          172 GNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN-----KILSRKKLLDDGKEHFFINISLDTARQRAF  246 (353)
T ss_dssp             TTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT-----EEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred             CCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC-----eEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence            45667777773 35688888764  57999999999999987521     2334455533  23456677776  46799


Q ss_pred             EEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         77 CGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        77 ~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +++.  +.|++||+++++..+.+.....     ..+.+++  ..+|++...++.|.+||..+++.++.+....
T Consensus       247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~  314 (353)
T 3vgz_A          247 ITDSKAAEVLVVDTRNGNILAKVAAPES-----LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT  314 (353)
T ss_dssp             EEESSSSEEEEEETTTCCEEEEEECSSC-----CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred             EEeCCCCEEEEEECCCCcEEEEEEcCCC-----ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC
Confidence            9884  6899999999999999986532     3466664  4589999999999999999999999887643

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.83  E-value=4.2e-07  Score=71.01  Aligned_cols=131  Identities=13%  Similarity=0.058  Sum_probs=100.5

Q ss_pred             CCCceeeeeeCCCc--eeeeEEeC-CeEEEEec---CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEE
Q psy16020          4 PHPTPYPLNKILDT--ALPPVHVQ-GRVVCALA---DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWC   77 (151)
Q Consensus         4 ~~~~~l~~i~l~~~--V~~i~~~~-~~v~vgl~---nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~   77 (151)
                      .+++.+.++.++..  ..-|.+.+ +++|++.+   ++.|.+++...+     +....++++....+ -.+++.+++||.
T Consensus         7 ~~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-----~v~~~i~l~~~~fg-eGi~~~g~~lyv   80 (266)
T 2iwa_A            7 YIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG-----KVENIHKMDDSYFG-EGLTLLNEKLYQ   80 (266)
T ss_dssp             EEEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC-----CEEEEEECCTTCCE-EEEEEETTEEEE
T ss_pred             cCceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC-----CEEEEEecCCCcce-EEEEEeCCEEEE
Confidence            35678899998854  56899887 89999976   478999998632     34456677652122 357778999999


Q ss_pred             Ee--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         78 GY--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        78 g~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +.  ++.+.++|++|+++.++|..- ..+ . -.+...|..+|+|- .++.|.++|+.|++.+..|.+.
T Consensus        81 ~t~~~~~v~viD~~t~~v~~~i~~g-~~~-g-~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg  145 (266)
T 2iwa_A           81 VVWLKNIGFIYDRRTLSNIKNFTHQ-MKD-G-WGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVK  145 (266)
T ss_dssp             EETTCSEEEEEETTTTEEEEEEECC-SSS-C-CEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred             EEecCCEEEEEECCCCcEEEEEECC-CCC-e-EEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEEC
Confidence            99  479999999999999999854 111 2 33666788888876 6899999999999999999875

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=98.82  E-value=4.8e-07  Score=69.80  Aligned_cols=133  Identities=11%  Similarity=0.041  Sum_probs=97.5

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCC-------ceEEEeee-
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHH-------SVRSLAAV-   71 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~-------pV~~m~~v-   71 (151)
                      ..+.+.++.++.+..+..+.+.+  +++|++.. +|.|.+|+...+     +....++++....       ..+++.+. 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  150 (353)
T 3vgz_A           76 PVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG-----EVKGRLVLDDRKRTEEVRPLQPRELVADD  150 (353)
T ss_dssp             TTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC-----CEEEEEESCCCCCCSSCCCCEEEEEEEET
T ss_pred             CCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC-----eeEEEEecCCCccccccCCCCCceEEECC
Confidence            34677888888888888888865  46888766 589999987532     2334566654222       15778886 


Q ss_pred             -CCEEEEEe---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         72 -YNKVWCGY---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        72 -~~~Lw~g~---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                       ++.+|++.   ++.|++||+++++..+.+..+..   .+..+.+++++ .++....++.|.+||..+.+.++.+..
T Consensus       151 dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~  224 (353)
T 3vgz_A          151 ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK---MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL  224 (353)
T ss_dssp             TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT---TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred             CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC---ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc
Confidence             46799887   35799999999999999885432   57777887553 244556689999999999999988876

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=98.80  E-value=1.6e-07  Score=79.39  Aligned_cols=135  Identities=19%  Similarity=0.235  Sum_probs=94.7

Q ss_pred             CCCceeeeeeCC-----CceeeeEEeC-CeEEEEe--cCCcEEEEEcCCCCC----CCCCcceEEEeCCCCCceEEEeee
Q psy16020          4 PHPTPYPLNKIL-----DTALPPVHVQ-GRVVCAL--ADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAV   71 (151)
Q Consensus         4 ~~~~~l~~i~l~-----~~V~~i~~~~-~~v~vgl--~nG~l~v~~~~~~~~----wd~~~~~~i~l~~~~~pV~~m~~v   71 (151)
                      .+.+++..+...     .....+.+-+ +++|+..  .|++|.+|+....+.    |  +..+.++...  ..+..+.+.
T Consensus       354 ~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~--~~v~~l~~~g--~~~~~v~~~  429 (543)
T 1nir_A          354 KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW--KKVAELQGQG--GGSLFIKTH  429 (543)
T ss_dssp             TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT--SEEEEEECSC--SCCCCEECC
T ss_pred             CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcC--eEEEEEEcCC--CCceEEEcC
Confidence            456677777652     2233443333 6788875  579999999875332    4  3345556543  556666665


Q ss_pred             --CCEEEEEe--------CCeEEEEeCCCCcEE-EEEEec-----CCCCCceeEEEEe--CCEEEEEEc----CCCeEEE
Q psy16020         72 --YNKVWCGY--------KNKIHVVDPKSLVVL-KSFDAH-----PRRESQVRQMTWA--GDGVWVSIR----LDSTLRM  129 (151)
Q Consensus        72 --~~~Lw~g~--------~n~I~vid~~t~~i~-~~~~~h-----~~~~~~I~~m~~~--~~~vwis~~----~d~~l~l  129 (151)
                        +..||++.        ++.|.|||.+|++.. +.+...     +.....+.+++++  |.-+|+|..    .++.|.+
T Consensus       430 pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v  509 (543)
T 1nir_A          430 PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV  509 (543)
T ss_dssp             TTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEE
T ss_pred             CCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEE
Confidence              46799998        459999999999987 555321     1223579999998  667798864    5899999


Q ss_pred             EeCCccceeeeEe
Q psy16020        130 YNAHTYQHLQDVD  142 (151)
Q Consensus       130 wd~~t~~~l~~id  142 (151)
                      ||.+|+++++.|.
T Consensus       510 ~D~~t~~~~~~i~  522 (543)
T 1nir_A          510 VDDKTLKLKAVVK  522 (543)
T ss_dssp             EETTTTEEEEEEC
T ss_pred             EECCCceEEEeec
Confidence            9999999999996

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=98.78  E-value=2.9e-07  Score=74.70  Aligned_cols=104  Identities=17%  Similarity=0.143  Sum_probs=67.8

Q ss_pred             CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeE
Q psy16020         34 DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQ  109 (151)
Q Consensus        34 nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~  109 (151)
                      |+.|.+|...++|.    ....+.+..+...+-++..++   ..|.-|+ ++.|++||++|++..++|++|...-..+.+
T Consensus       156 d~~V~~~~~s~dG~----~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~  231 (356)
T 2w18_A          156 DQQVEVMTFAEDGG----GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCH  231 (356)
T ss_dssp             TCEEEEEEECTTSC----EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEE
T ss_pred             CCcEEEEEECCCCc----eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEE
Confidence            66777777655442    223344444334444455542   3455556 468999999999999999987544457888


Q ss_pred             EEEeCCEEE-------------EEEcCCCeEEEEeCCccceeeeE
Q psy16020        110 MTWAGDGVW-------------VSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       110 m~~~~~~vw-------------is~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++++++|..             .|++.|.+|++||..+++.+..+
T Consensus       232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~  276 (356)
T 2w18_A          232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM  276 (356)
T ss_dssp             EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred             EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence            888877763             46788999999999999887654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.76  E-value=8.9e-07  Score=69.29  Aligned_cols=126  Identities=8%  Similarity=-0.057  Sum_probs=95.6

Q ss_pred             ceeeeeeCCCce--eeeEEeCCeEEEEecC-CcEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeCCEEEEEe--C
Q psy16020          7 TPYPLNKILDTA--LPPVHVQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCGY--K   80 (151)
Q Consensus         7 ~~l~~i~l~~~V--~~i~~~~~~v~vgl~n-G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw~g~--~   80 (151)
                      +.+.++......  .-|.+.++++|++.++ |.|.+++...+     +....+ +..  .+- -.+++.+++||.+.  +
T Consensus        44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tg-----kv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~~  115 (268)
T 3nok_A           44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESA-----QPVWME-RLG--NIFAEGLASDGERLYQLTWTE  115 (268)
T ss_dssp             EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCS-----SCSEEE-ECT--TCCEEEEEECSSCEEEEESSS
T ss_pred             EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCC-----cEEeEE-CCC--CcceeEEEEeCCEEEEEEccC
Confidence            456667665444  6888999999999887 68888887532     344555 654  332 34777889999999  5


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +.++|||++|++.+++|..-.. .   -.+...+..+|+|- .++.|.++|+.|++.+..|.+..
T Consensus       116 ~~v~V~D~~Tl~~~~ti~~~~e-G---wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~  175 (268)
T 3nok_A          116 GLLFTWSGMPPQRERTTRYSGE-G---WGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL  175 (268)
T ss_dssp             CEEEEEETTTTEEEEEEECSSC-C---CCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred             CEEEEEECCcCcEEEEEeCCCc-e---eEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC
Confidence            7999999999999999996432 1   34456788888886 59999999999999999998743

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.76  E-value=4.4e-07  Score=70.84  Aligned_cols=128  Identities=12%  Similarity=0.039  Sum_probs=96.7

Q ss_pred             CCceeeeeeCCCce--eeeEEeCCeEEEEecC-C--cEEEEEcCCCCCCCCCcceEEEeCCCCCce-EEEeeeCCEEEEE
Q psy16020          5 HPTPYPLNKILDTA--LPPVHVQGRVVCALAD-G--SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCG   78 (151)
Q Consensus         5 ~~~~l~~i~l~~~V--~~i~~~~~~v~vgl~n-G--~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw~g   78 (151)
                      .++.+.++......  .-|.+.++++|++.++ |  .|.+++...+     +....+++..  .+- -.+++.+++||..
T Consensus        30 ~~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tg-----kv~~~~~l~~--~~FgeGit~~g~~ly~l  102 (262)
T 3nol_A           30 DYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESG-----KTLQQIELGK--RYFGEGISDWKDKIVGL  102 (262)
T ss_dssp             EEEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTC-----CEEEEEECCT--TCCEEEEEEETTEEEEE
T ss_pred             ceEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCC-----cEEEEEecCC--ccceeEEEEeCCEEEEE
Confidence            45667777666444  7788889999999976 4  8999987532     3445566654  332 3477789999999


Q ss_pred             e--CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         79 Y--KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        79 ~--~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .  ++.++++|++|++.+++|..-.. .   -.+...+..+|+|- .++.|.++|+.|++.+..|.+.
T Consensus       103 tw~~~~v~v~D~~t~~~~~ti~~~~e-G---~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~  165 (262)
T 3nol_A          103 TWKNGLGFVWNIRNLRQVRSFNYDGE-G---WGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVT  165 (262)
T ss_dssp             ESSSSEEEEEETTTCCEEEEEECSSC-C---CCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECE
T ss_pred             EeeCCEEEEEECccCcEEEEEECCCC-c---eEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEec
Confidence            9  47999999999999999996432 1   23446677778775 4899999999999999999874

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.75  E-value=2.7e-07  Score=79.27  Aligned_cols=111  Identities=11%  Similarity=0.108  Sum_probs=85.5

Q ss_pred             CCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEE-eCCCCC-----ceEEEeeeC--CEEEEEeC-CeE
Q psy16020         15 LDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHH-----SVRSLAAVY--NKVWCGYK-NKI   83 (151)
Q Consensus        15 ~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~-l~~~~~-----pV~~m~~v~--~~Lw~g~~-n~I   83 (151)
                      .+.|.++.+.++  .+-++..||++.+|++.  +        .+. +. +..     .|+++++..  +.|..|+. ++|
T Consensus        85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~--~--------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV  153 (588)
T 2j04_A           85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN--K--------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL  153 (588)
T ss_dssp             SCCEEEEEECSSSSCEEEEETTSCEEEEETT--E--------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCcEEEEeCC--c--------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence            378999999754  69999999999999853  1        222 22 223     599999973  56888884 799


Q ss_pred             EEEeCCCCcE-------EEEEEecCC-CCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020         84 HVVDPKSLVV-------LKSFDAHPR-RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        84 ~vid~~t~~i-------~~~~~~h~~-~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      .+||++++++       .+++..|.. ....|.+++++++| .++.+.|..+++||..+.+.
T Consensus       154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~  214 (588)
T 2j04_A          154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH  214 (588)
T ss_dssp             EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS
T ss_pred             EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc
Confidence            9999999863       678743321 02389999999999 89999999999999988663

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=98.74  E-value=9.5e-08  Score=78.45  Aligned_cols=128  Identities=12%  Similarity=0.001  Sum_probs=90.9

Q ss_pred             eeeCCCceeeeEEeCC--eEE----EEecCCcEEEEEcCCC--CCCCC-CcceEEEe-CCCCCceEEEeeeC---CEEEE
Q psy16020         11 LNKILDTALPPVHVQG--RVV----CALADGSVAIFRRGPD--GQWDL-SKYHTVTL-GLPHHSVRSLAAVY---NKVWC   77 (151)
Q Consensus        11 ~i~l~~~V~~i~~~~~--~v~----vgl~nG~l~v~~~~~~--~~wd~-~~~~~i~l-~~~~~pV~~m~~v~---~~Lw~   77 (151)
                      .++++..|.++.+.++  +++    .|..||+|.+|+....  +.+.. +....+.. ..+..+|+++.+..   +.|..
T Consensus        88 ~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las  167 (434)
T 2oit_A           88 LVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV  167 (434)
T ss_dssp             EECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred             cccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence            4566778999999753  566    3556899999987531  11111 11123343 22458999999974   35666


Q ss_pred             Ee-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         78 GY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        78 g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      |+ +++|++||.++++.......|..   .|.++.++++|- +++++.|+.|++||.+ .+....+.
T Consensus       168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~---~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~  230 (434)
T 2oit_A          168 CLADGSIAVLQVTETVKVCATLPSTV---AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP  230 (434)
T ss_dssp             EETTSCEEEEEESSSEEEEEEECGGG---CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred             EECCCeEEEEEcCCCcceeeccCCCC---ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence            66 46899999999987777777754   899999997654 7899999999999998 55555553

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=98.72  E-value=4e-07  Score=72.49  Aligned_cols=137  Identities=12%  Similarity=0.151  Sum_probs=89.1

Q ss_pred             eeeCCCceeeeEEeC-CeEEEEecCC--------cEEEEEcCCCCCC---CCCcceEEEeCCCCCceEEEeeeCCEEEEE
Q psy16020         11 LNKILDTALPPVHVQ-GRVVCALADG--------SVAIFRRGPDGQW---DLSKYHTVTLGLPHHSVRSLAAVYNKVWCG   78 (151)
Q Consensus        11 ~i~l~~~V~~i~~~~-~~v~vgl~nG--------~l~v~~~~~~~~w---d~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g   78 (151)
                      +.++.-||+|+.+.+ ++++++.+.|        .|.+|+...+..-   .+.....+.+......|.|+.+.++.+.+|
T Consensus        10 ~~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g   89 (365)
T 4h5i_A           10 SYNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVG   89 (365)
T ss_dssp             EEECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEE
T ss_pred             ecCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEE
Confidence            445667999999864 4666665433        4999987643311   011122345655457889999988888887


Q ss_pred             e------------CCeEEEEeCCCCcEE----EEEE--ecCCCCCceeEEEEeCCEEE---EEEcCCCeEEEEeCCccce
Q psy16020         79 Y------------KNKIHVVDPKSLVVL----KSFD--AHPRRESQVRQMTWAGDGVW---VSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        79 ~------------~n~I~vid~~t~~i~----~~~~--~h~~~~~~I~~m~~~~~~vw---is~~~d~~l~lwd~~t~~~  137 (151)
                      +            ++.+.+|+.++.+-.    ....  .+.+.+..+..++++++|-+   .|.+.|++|++||++++++
T Consensus        90 ~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~  169 (365)
T 4h5i_A           90 CNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE  169 (365)
T ss_dssp             CCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred             ECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence            5            235788876554322    1111  12333457899999988753   3556799999999999999


Q ss_pred             eeeEeCCccc
Q psy16020        138 LQDVDIEPYV  147 (151)
Q Consensus       138 l~~idi~~~v  147 (151)
                      +.+++-...|
T Consensus       170 ~~~~~~~~~V  179 (365)
T 4h5i_A          170 KFEIETRGEV  179 (365)
T ss_dssp             EEEEECSSCC
T ss_pred             EEEeCCCCce
Confidence            9888644433

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.69  E-value=1.1e-06  Score=75.40  Aligned_cols=113  Identities=11%  Similarity=0.045  Sum_probs=84.2

Q ss_pred             ceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcc-----eEEEe--CCCCCceEEEeeeCCEEEEEe-CCeEEEE
Q psy16020         17 TALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKY-----HTVTL--GLPHHSVRSLAAVYNKVWCGY-KNKIHVV   86 (151)
Q Consensus        17 ~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~-----~~i~l--~~~~~pV~~m~~v~~~Lw~g~-~n~I~vi   86 (151)
                      +|.++.++++  .+++|..||+|.+|+...+   .+..|     +.++.  +++..+|.+++...+.+.+++ ++.|++|
T Consensus       131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~---~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlW  207 (588)
T 2j04_A          131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKN---SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSM  207 (588)
T ss_dssp             CEEEEEECSSSSCEEEEETTSEEEEEECCCC---TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEE
T ss_pred             cEEEEEEcCCCCEEEEEcCCCEEEEEECCCC---ccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEE
Confidence            5999998754  7999999999999998642   22223     33332  334579999999865566666 4689999


Q ss_pred             eCCCCcE---EEEEE-ecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce
Q psy16020         87 DPKSLVV---LKSFD-AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        87 d~~t~~i---~~~~~-~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      |..+.+.   .+++. +|..   .|..++++| ...++++ ++.|++||..+.+.
T Consensus       208 d~~~~~~~~~~~tL~~~h~~---~V~svaFsg-~~LASa~-~~tIkLWd~~~~~~  257 (588)
T 2j04_A          208 TVSASSHQPVSRMIQNASRR---KITDLKIVD-YKVVLTC-PGYVHKIDLKNYSI  257 (588)
T ss_dssp             CCCSSSSCCCEEEEECCCSS---CCCCEEEET-TEEEEEC-SSEEEEEETTTTEE
T ss_pred             ECCCCccccceeeecccccC---cEEEEEEEC-CEEEEEe-CCeEEEEECCCCeE
Confidence            9998773   46774 6654   899999995 5566776 69999999997666

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.61  E-value=5.8e-06  Score=65.31  Aligned_cols=137  Identities=12%  Similarity=0.050  Sum_probs=92.3

Q ss_pred             CCceeeeeeCCCce------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCC-CCCceE-EEeeeCCEE
Q psy16020          5 HPTPYPLNKILDTA------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGL-PHHSVR-SLAAVYNKV   75 (151)
Q Consensus         5 ~~~~l~~i~l~~~V------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~-~~~pV~-~m~~v~~~L   75 (151)
                      ..+.+|+.++++.+      ......+++||++..+|.|..|+...+. .|..+.+....... ...++. .....++.|
T Consensus        27 ~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  106 (376)
T 3q7m_A           27 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHV  106 (376)
T ss_dssp             CCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEE
T ss_pred             cceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEE
Confidence            45788999988532      2556678999999999999999975322 34322211100000 013443 344568999


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      |+++. +.|+.+|++|++..-++......   .......++.+| ....++.|..+|++|++.+...+...
T Consensus       107 ~v~~~~g~l~a~d~~tG~~~W~~~~~~~~---~~~p~~~~~~v~-v~~~~g~l~~~d~~tG~~~W~~~~~~  173 (376)
T 3q7m_A          107 YIGSEKAQVYALNTSDGTVAWQTKVAGEA---LSRPVVSDGLVL-IHTSNGQLQALNEADGAVKWTVNLDM  173 (376)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECSSCC---CSCCEEETTEEE-EECTTSEEEEEETTTCCEEEEEECCC
T ss_pred             EEEcCCCEEEEEECCCCCEEEEEeCCCce---EcCCEEECCEEE-EEcCCCeEEEEECCCCcEEEEEeCCC
Confidence            99996 58999999999998777765331   222234466666 45678899999999999998887643

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=98.59  E-value=2.4e-06  Score=65.10  Aligned_cols=131  Identities=18%  Similarity=0.226  Sum_probs=93.9

Q ss_pred             CCCCceeeeeeCCC---ceeeeEEeCC--eEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCC---CCceEEEeee--
Q psy16020          3 YPHPTPYPLNKILD---TALPPVHVQG--RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSVRSLAAV--   71 (151)
Q Consensus         3 ~~~~~~l~~i~l~~---~V~~i~~~~~--~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV~~m~~v--   71 (151)
                      ..+.+.++.+.++.   .+.++.+.++  ++|++.. +|.|.+|+....     +....+.++.+   ...+.++.+.  
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~d   92 (337)
T 1pby_B           18 TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-----ETLGRIDLSTPEERVKSLFGAALSPD   92 (337)
T ss_dssp             TTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-----CEEEEEECCBTTEEEECTTCEEECTT
T ss_pred             CCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-----CeEeeEEcCCcccccccccceEECCC
Confidence            34667888999987   7889988653  6777654 679999987521     22234555421   0145667775  


Q ss_pred             CCEEEEEe-------------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020         72 YNKVWCGY-------------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        72 ~~~Lw~g~-------------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~  136 (151)
                      ++.||++.             .+.|++||+++++..+.+...    ..+..+.+++++  ++++   ++.|++||..+.+
T Consensus        93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~  165 (337)
T 1pby_B           93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP----RQITMLAWARDGSKLYGL---GRDLHVMDPEAGT  165 (337)
T ss_dssp             SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC----SSCCCEEECTTSSCEEEE---SSSEEEEETTTTE
T ss_pred             CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC----CCcceeEECCCCCEEEEe---CCeEEEEECCCCc
Confidence            35799885             479999999999999888853    257788888665  4444   6889999999999


Q ss_pred             eeeeEeCCc
Q psy16020        137 HLQDVDIEP  145 (151)
Q Consensus       137 ~l~~idi~~  145 (151)
                      ....+....
T Consensus       166 ~~~~~~~~~  174 (337)
T 1pby_B          166 LVEDKPIQS  174 (337)
T ss_dssp             EEEEECSTT
T ss_pred             Eeeeeeccc
Confidence            988876543

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=98.57  E-value=3.7e-06  Score=64.52  Aligned_cols=130  Identities=13%  Similarity=0.096  Sum_probs=93.6

Q ss_pred             CCCceeeeeeCCCceeeeEEeCC--eEEEEecC-Cc-EEEEEcCCCCCC-CCCcceEEEeCCCCCceEEEeeeC--CEEE
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQG--RVVCALAD-GS-VAIFRRGPDGQW-DLSKYHTVTLGLPHHSVRSLAAVY--NKVW   76 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~--~v~vgl~n-G~-l~v~~~~~~~~w-d~~~~~~i~l~~~~~pV~~m~~v~--~~Lw   76 (151)
                      .+.+.+..++.+..+.++.+.++  ++|++..+ +. |.+|+...+|.. +.. ...+..+   ...+++.+..  +.||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~---~~~~~~~~spdg~~l~  191 (331)
T 3u4y_A          116 LKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISGG---TRPFNITFTPDGNFAF  191 (331)
T ss_dssp             TTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECSS---SSEEEEEECTTSSEEE
T ss_pred             CCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccCC---CCccceEECCCCCEEE
Confidence            45677788888888889988765  58887554 78 999998765531 111 1222222   4457888863  4699


Q ss_pred             EEeC--CeEEEEeCCCCcE---EEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccce--eeeE
Q psy16020         77 CGYK--NKIHVVDPKSLVV---LKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQH--LQDV  141 (151)
Q Consensus        77 ~g~~--n~I~vid~~t~~i---~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~--l~~i  141 (151)
                      +++.  +.|++||+++++.   .+++..+    ..+..|.++++|  +|++...++.|.+||..+++.  ++.+
T Consensus       192 v~~~~~~~v~v~d~~~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~  261 (331)
T 3u4y_A          192 VANLIGNSIGILETQNPENITLLNAVGTN----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF  261 (331)
T ss_dssp             EEETTTTEEEEEECSSTTSCEEEEEEECS----SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred             EEeCCCCeEEEEECCCCcccceeeeccCC----CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence            9883  6899999999998   7777754    367888888554  577777889999999998877  4444

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.54  E-value=1.1e-05  Score=66.12  Aligned_cols=118  Identities=14%  Similarity=0.088  Sum_probs=90.7

Q ss_pred             eeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe-CCeEEEEe
Q psy16020          9 YPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KNKIHVVD   87 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~-~n~I~vid   87 (151)
                      ...+.+|+ |..|.+.++.++++ .+|.|.+|+..+     +.....++...  .++.++......+.++. ++.|++||
T Consensus        82 ~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~s-----l~~~~~~~~~~--~~v~~i~~~~p~~av~~~dG~L~v~d  152 (388)
T 1xip_A           82 KWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEE-----LSEFRTVTSFE--KPVFQLKNVNNTLVILNSVNDLSALD  152 (388)
T ss_dssp             SEEEECTT-EEEEEEETTEEEEE-ESSEEEEEESSS-----TTCEEEEEECS--SCEEEEEECSSEEEEEETTSEEEEEE
T ss_pred             eEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchh-----hhccCccceee--cceeeEEecCCCEEEEECCCCEEEEE
Confidence            35667899 99999977789998 899999999763     22333444444  77888877766666655 57999999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccce--eeeEeC
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH--LQDVDI  143 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~--l~~idi  143 (151)
                      .++++.++    +.   ..|+++++++.| .+.+..|+.+++|+..+++.  ..+|..
T Consensus       153 l~~~~~~~----~~---~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~  202 (388)
T 1xip_A          153 LRTKSTKQ----LA---QNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSL  202 (388)
T ss_dssp             TTTCCEEE----EE---ESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred             ccCCcccc----cc---CCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecC
Confidence            99988764    21   389999999999 67788899999999988776  667743

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.53  E-value=7.9e-06  Score=64.53  Aligned_cols=133  Identities=8%  Similarity=-0.067  Sum_probs=91.2

Q ss_pred             CCCCceeeeeeCCC----------ce-eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCceEEEee
Q psy16020          3 YPHPTPYPLNKILD----------TA-LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA   70 (151)
Q Consensus         3 ~~~~~~l~~i~l~~----------~V-~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV~~m~~   70 (151)
                      ..+.+.+|+.+++.          .+ ..+...+++||++..+|.|..|+...+. .|      ..+++.  ........
T Consensus        70 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W------~~~~~~--~~~~~p~~  141 (376)
T 3q7m_A           70 ADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAW------QTKVAG--EALSRPVV  141 (376)
T ss_dssp             TTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE------EEECSS--CCCSCCEE
T ss_pred             ccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEE------EEeCCC--ceEcCCEE
Confidence            35678899998842          23 3456678999999999999999975322 24      334433  22222345


Q ss_pred             eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCC--CceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         71 VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRE--SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        71 v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~--~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .++.||+++. +.|+.+|++|++..-++.......  .........++.+|+ +..++.|..+|..+++.+.+.+..
T Consensus       142 ~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~  217 (376)
T 3q7m_A          142 SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV-GGDNGRVSAVLMEQGQMIWQQRIS  217 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-CCTTTEEEEEETTTCCEEEEEECC
T ss_pred             ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-EcCCCEEEEEECCCCcEEEEEecc
Confidence            6899999985 589999999999988877543210  001233444666665 567889999999999998887654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.50  E-value=1.9e-05  Score=67.40  Aligned_cols=135  Identities=10%  Similarity=0.003  Sum_probs=98.3

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-----C-CE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-----Y-NK   74 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-----~-~~   74 (151)
                      ..+.+.+.+|.+...+..+.+.+  +++|++..+|.|.+|+....   ..+....+++|.  .| +.|.+.     + +.
T Consensus       184 ~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~---t~~~v~~i~~G~--~P-~~ia~s~~~~pDGk~  257 (567)
T 1qks_A          184 GSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK---EPTTVAEIKIGS--EA-RSIETSKMEGWEDKY  257 (567)
T ss_dssp             TTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCCEEEEEECCS--EE-EEEEECCSTTCTTTE
T ss_pred             CCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCC---CCcEeEEEecCC--CC-ceeEEccccCCCCCE
Confidence            35678889999888888888864  47999999999999997310   223445677775  55 577776     3 57


Q ss_pred             EEEEe--CCeEEEEeCCCCcEEEEEEecC----------CC---------------------------------------
Q psy16020         75 VWCGY--KNKIHVVDPKSLVVLKSFDAHP----------RR---------------------------------------  103 (151)
Q Consensus        75 Lw~g~--~n~I~vid~~t~~i~~~~~~h~----------~~---------------------------------------  103 (151)
                      +|+++  .++|.|||+.|+++.+++....          ..                                       
T Consensus       258 l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~  337 (567)
T 1qks_A          258 AIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE  337 (567)
T ss_dssp             EEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE
T ss_pred             EEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee
Confidence            99988  4899999999999999877421          10                                       


Q ss_pred             ---CCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        104 ---ESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       104 ---~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                         ....+.+.+++  ..++++...++.|.++|+.+.+.+..+++
T Consensus       338 i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v  382 (567)
T 1qks_A          338 ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT  382 (567)
T ss_dssp             EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred             eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence               00112333443  34577888899999999999999998887

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=98.49  E-value=2.5e-06  Score=69.89  Aligned_cols=113  Identities=18%  Similarity=0.129  Sum_probs=81.9

Q ss_pred             CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeC
Q psy16020         15 LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        15 ~~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~   88 (151)
                      .++|.++.++++   .+.+|..||+|.+|+....       ........+..+|+|+...  ++.|++|+. ++|++||+
T Consensus       149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~  221 (434)
T 2oit_A          149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP  221 (434)
T ss_dssp             GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence            479999999753   5777999999999987532       1122222234799999997  467998985 58999999


Q ss_pred             CCCcEEEEEEecCCCC----CceeEEEEeCCEEEE---EEcC-----CCeEEEEeCCcc
Q psy16020         89 KSLVVLKSFDAHPRRE----SQVRQMTWAGDGVWV---SIRL-----DSTLRMYNAHTY  135 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~----~~I~~m~~~~~~vwi---s~~~-----d~~l~lwd~~t~  135 (151)
                      + ++..+++..|....    ..|.++.+.+++.++   +..+     ...+++||.++.
T Consensus       222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            8 77888887775422    278999999887766   2222     235999999864

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=98.48  E-value=1.9e-05  Score=60.43  Aligned_cols=119  Identities=7%  Similarity=-0.021  Sum_probs=87.7

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCc-ceEEEeCCCCCceEEEeee--CCEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSK-YHTVTLGLPHHSVRSLAAV--YNKVW   76 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~-nG~l~v~~~~~~~~wd~~~-~~~i~l~~~~~pV~~m~~v--~~~Lw   76 (151)
                      .+.+.+..+..+ ..+ ++.+.+  +++|++.. ++.|.+|+...+     +. ...+..+.  .|..++.+.  ++.|+
T Consensus        28 ~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~--~~~~~~~~s~dg~~l~   99 (331)
T 3u4y_A           28 DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE-----PPKVVAIQEGQ--SSMADVDITPDDQFAV   99 (331)
T ss_dssp             TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-----SCEEEEEEECS--SCCCCEEECTTSSEEE
T ss_pred             cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-----ceeEEecccCC--CCccceEECCCCCEEE
Confidence            456777788876 455 887754  35888876 789999987532     12 34455555  777757775  35788


Q ss_pred             EEeCC----eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCe-EEEEeCCc
Q psy16020         77 CGYKN----KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDST-LRMYNAHT  134 (151)
Q Consensus        77 ~g~~n----~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~-l~lwd~~t  134 (151)
                      ++.++    .|++||+++++..+.+..+.    ..+.+.++++|  ++++...+.. |++|+...
T Consensus       100 ~~~~~~~~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~  160 (331)
T 3u4y_A          100 TVTGLNHPFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNGLILIDRSSANTVRRFKIDA  160 (331)
T ss_dssp             ECCCSSSSCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred             EecCCCCcccEEEEECCCCCeEEEEECCC----CccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence            77765    89999999999999888653    56899999775  6778788788 99999775

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=98.45  E-value=2.8e-06  Score=68.05  Aligned_cols=119  Identities=11%  Similarity=0.075  Sum_probs=72.6

Q ss_pred             CceeeeEEeC----------CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC---CEEEEEeC-C
Q psy16020         16 DTALPPVHVQ----------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-N   81 (151)
Q Consensus        16 ~~V~~i~~~~----------~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~---~~Lw~g~~-n   81 (151)
                      +.|.++.+.+          +.+..|..|++|.+|+...++       ....+..+..||.++.+..   +.|..|+. +
T Consensus       137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~  209 (393)
T 4gq1_A          137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQLIVGERNG  209 (393)
T ss_dssp             SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred             CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence            6899999863          356677889999999874221       2223322348999999974   24777774 6


Q ss_pred             eEEEEeCCCCcEEEEEEecCC----------------------CCCceeEEEEe-CC-EEEEEEcCCCeEEEEeCCccce
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPR----------------------RESQVRQMTWA-GD-GVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~----------------------~~~~I~~m~~~-~~-~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      .|++||.++++...++..+..                      ....|.++.+. .+ ...++++.|+.+++||..+.+.
T Consensus       210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~  289 (393)
T 4gq1_A          210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND  289 (393)
T ss_dssp             EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred             EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence            899999999886655442211                      12367777776 23 3478999999999999998776


Q ss_pred             eeeE
Q psy16020        138 LQDV  141 (151)
Q Consensus       138 l~~i  141 (151)
                      ...+
T Consensus       290 ~~~l  293 (393)
T 4gq1_A          290 YNEI  293 (393)
T ss_dssp             ----
T ss_pred             CceE
Confidence            6655

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=98.43  E-value=1.7e-05  Score=60.46  Aligned_cols=134  Identities=13%  Similarity=0.135  Sum_probs=87.4

Q ss_pred             ceeeeeeCCCceeeeEEeCC--eEEEEe-cCCcEEEEEcCCCCCCCCCcce--EEEeCCCCCceEEEeeeC--CEEEEEe
Q psy16020          7 TPYPLNKILDTALPPVHVQG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYH--TVTLGLPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~--~v~vgl-~nG~l~v~~~~~~~~wd~~~~~--~i~l~~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      +.+..+.....+.++.+.++  ++|++. .+|.|.+|+...++..  ....  .+.... ...++++.+..  +.||+++
T Consensus       120 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~pdg~~l~~~~  196 (343)
T 1ri6_A          120 GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--VAQDPAEVTTVE-GAGPRHMVFHPNEQYAYCVN  196 (343)
T ss_dssp             EEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEEECST-TCCEEEEEECTTSSEEEEEE
T ss_pred             cccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--eeecccccccCC-CCCcceEEECCCCCEEEEEe
Confidence            34455555567888888754  688887 8999999998754432  1111  223322 25677888863  4688877


Q ss_pred             --CCeEEEEeCC--CCcE--EEEEEecCC---CCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC----ccceeeeEeC
Q psy16020         80 --KNKIHVVDPK--SLVV--LKSFDAHPR---RESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH----TYQHLQDVDI  143 (151)
Q Consensus        80 --~n~I~vid~~--t~~i--~~~~~~h~~---~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~----t~~~l~~idi  143 (151)
                        +++|++||.+  +++.  .+.+...+.   ....+..+.+++++  ++++.+.++.|++||..    +.+.+..+..
T Consensus       197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~  275 (343)
T 1ri6_A          197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT  275 (343)
T ss_dssp             TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred             CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence              3689999984  4544  333432211   12357788888654  67788899999999998    4566666654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=98.40  E-value=1.1e-05  Score=61.47  Aligned_cols=114  Identities=8%  Similarity=0.070  Sum_probs=78.9

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC--CeEEEEeCCCCcEEEEEEecC
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKSLVVLKSFDAHP  101 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~  101 (151)
                      +.++++..+|+|.+|+....     +....+.++.....++++.+..  +.+|+++.  +.|++||+.+++..+++....
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~   76 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKM-----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST   76 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTT-----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred             cEEEEcCCCCeEEEEECCCC-----cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC
Confidence            36788889999999987521     2334455553111467777763  47888774  589999999999998887532


Q ss_pred             CC--CCceeEEEEeCCE--EEEEEc-----------CCCeEEEEeCCccceeeeEeCC
Q psy16020        102 RR--ESQVRQMTWAGDG--VWVSIR-----------LDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       102 ~~--~~~I~~m~~~~~~--vwis~~-----------~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ..  ...+..+.++++|  ++++..           .++.|++||..+.+.++.+...
T Consensus        77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~  134 (337)
T 1pby_B           77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP  134 (337)
T ss_dssp             TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC
T ss_pred             cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC
Confidence            10  1246678888665  444431           5799999999999998888654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=98.39  E-value=7.8e-06  Score=62.65  Aligned_cols=131  Identities=14%  Similarity=0.070  Sum_probs=88.4

Q ss_pred             CCCCceeeeeeCCC--ceeeeEEeCC--eEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCC----CCceEEEeee--
Q psy16020          3 YPHPTPYPLNKILD--TALPPVHVQG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLP----HHSVRSLAAV--   71 (151)
Q Consensus         3 ~~~~~~l~~i~l~~--~V~~i~~~~~--~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~----~~pV~~m~~v--   71 (151)
                      ..+.+.++.+.++.  .+..+.+.++  ++|++. .+|.|.+|+... +    +....++++..    ...++++.+.  
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~----~~~~~~~~~~~~~~~~~~~~~~~~spd  102 (349)
T 1jmx_B           28 VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-C----KNTFHANLSSVPGEVGRSMYSFAISPD  102 (349)
T ss_dssp             TTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-T----EEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred             CCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-C----cEEEEEEcccccccccccccceEECCC
Confidence            35677888898887  7888887643  587775 578999998642 1    22234455431    1226777775  


Q ss_pred             CCEEEEEe-------------CCeEEEEeCCCCcE---EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcc
Q psy16020         72 YNKVWCGY-------------KNKIHVVDPKSLVV---LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        72 ~~~Lw~g~-------------~n~I~vid~~t~~i---~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~  135 (151)
                      ++.|+++.             .+.|++||+++++.   .+.+..+    ..+.++.++++|-++..+.  .|++||..++
T Consensus       103 g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~  176 (349)
T 1jmx_B          103 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP----RQVYLMRAADDGSLYVAGP--DIYKMDVKTG  176 (349)
T ss_dssp             SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC----SSCCCEEECTTSCEEEESS--SEEEECTTTC
T ss_pred             CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC----CcccceeECCCCcEEEccC--cEEEEeCCCC
Confidence            35788888             47999999998554   3444432    2688888886653333443  3999999999


Q ss_pred             ceeeeEeCC
Q psy16020        136 QHLQDVDIE  144 (151)
Q Consensus       136 ~~l~~idi~  144 (151)
                      +..+.+...
T Consensus       177 ~~~~~~~~~  185 (349)
T 1jmx_B          177 KYTVALPLR  185 (349)
T ss_dssp             CEEEEECST
T ss_pred             ceecccccc
Confidence            998887654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=98.36  E-value=5.6e-06  Score=63.46  Aligned_cols=91  Identities=9%  Similarity=0.017  Sum_probs=60.5

Q ss_pred             CCCceeeeeeCCCc-------eeeeEEeCC--eEEEEecC------------CcEEEEEcCCCCCCCCCcceEEEeCCCC
Q psy16020          4 PHPTPYPLNKILDT-------ALPPVHVQG--RVVCALAD------------GSVAIFRRGPDGQWDLSKYHTVTLGLPH   62 (151)
Q Consensus         4 ~~~~~l~~i~l~~~-------V~~i~~~~~--~v~vgl~n------------G~l~v~~~~~~~~wd~~~~~~i~l~~~~   62 (151)
                      .+.+.++.++++..       +.++.+.++  ++|++..+            +.|.+|+...+..  .........   .
T Consensus        73 ~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~---~  147 (349)
T 1jmx_B           73 DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--AKPVRTFPM---P  147 (349)
T ss_dssp             TTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--BCCSEEEEC---C
T ss_pred             CCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--cceeeeccC---C
Confidence            45667777877643       778887643  78888865            8999998753110  111122222   2


Q ss_pred             CceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEec
Q psy16020         63 HSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        63 ~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h  100 (151)
                      ..+.++.+. ++++|++ ++.|++||++++++.+.+..+
T Consensus       148 ~~~~~~~~s~dg~l~~~-~~~i~~~d~~~~~~~~~~~~~  185 (349)
T 1jmx_B          148 RQVYLMRAADDGSLYVA-GPDIYKMDVKTGKYTVALPLR  185 (349)
T ss_dssp             SSCCCEEECTTSCEEEE-SSSEEEECTTTCCEEEEECST
T ss_pred             CcccceeECCCCcEEEc-cCcEEEEeCCCCceecccccc
Confidence            457788775 3458885 555999999999998888754

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.32  E-value=1.4e-05  Score=65.45  Aligned_cols=112  Identities=8%  Similarity=-0.016  Sum_probs=85.1

Q ss_pred             eCCeEEEEec-----CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         24 VQGRVVCALA-----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        24 ~~~~v~vgl~-----nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      ..+++||+-.     +|.|.+++..     ..+....+++|.  .| . |++.  +++||+++           .|.|.+
T Consensus        43 d~~~vyV~~~~~~~~~~~V~ViD~~-----t~~v~~~I~vG~--~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv  113 (386)
T 3sjl_D           43 DARRVYVNDPAHFAAVTQQFVIDGE-----AGRVIGMIDGGF--LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV  113 (386)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETT-----TTEEEEEEEECS--SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCEEEEEcCcccCCCCEEEEEECC-----CCeEEEEEECCC--CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence            4678999976     5799999875     234556788887  77 4 7776  36699987           367999


Q ss_pred             EeCCCCcEEEEEEecCC----CCCceeEEEEeCC--EEEEEEcC-CCeEEEEeCCccceeeeEeCC
Q psy16020         86 VDPKSLVVLKSFDAHPR----RESQVRQMTWAGD--GVWVSIRL-DSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~----~~~~I~~m~~~~~--~vwis~~~-d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ||+.|+++.+++.....    .......+.++++  .+|++-.. ++.|.++|+.+.+.+++|++.
T Consensus       114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~  179 (386)
T 3sjl_D          114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP  179 (386)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred             EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence            99999999999986421    1124566777744  56777654 799999999999999999763

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=98.32  E-value=1.4e-05  Score=60.94  Aligned_cols=111  Identities=9%  Similarity=0.081  Sum_probs=75.8

Q ss_pred             CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCC--CCcE--EEE
Q psy16020         26 GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK--SLVV--LKS   96 (151)
Q Consensus        26 ~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~--t~~i--~~~   96 (151)
                      +.+|++ ..+|.|.+|+....|..  .....+..   ..++.++.+.  ++.|++++.  +.|.+||.+  +++.  ...
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGAL--TLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE   79 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEC---SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcE--EEeeeEec---CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence            468888 67999999998644422  11122222   2567788886  356998885  689998876  6654  445


Q ss_pred             EEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeC---CccceeeeEeCCc
Q psy16020         97 FDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA---HTYQHLQDVDIEP  145 (151)
Q Consensus        97 ~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~---~t~~~l~~idi~~  145 (151)
                      +..+.    .+..+++++++  ++++...++.|++||.   .+.+..+.+...+
T Consensus        80 ~~~~~----~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  129 (343)
T 1ri6_A           80 SALPG----SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD  129 (343)
T ss_dssp             EECSS----CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT
T ss_pred             cccCC----CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC
Confidence            55432    67888888654  6777788999999999   6667777665433

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.22  E-value=1.2e-05  Score=64.14  Aligned_cols=110  Identities=13%  Similarity=0.183  Sum_probs=80.1

Q ss_pred             CCeEEEEe------cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         25 QGRVVCAL------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        25 ~~~v~vgl------~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      ++++|+.-      .+|.|.+|+... +    +....++.+.  .|  .+++.  ++.||+++           ++.|.+
T Consensus        15 ~~~~yv~~~~~~~~~d~~v~v~D~~t-~----~~~~~i~~g~--~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v   85 (361)
T 2oiz_A           15 ENRIYVMDSVFMHLTESRVHVYDYTN-G----KFLGMVPTAF--NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV   85 (361)
T ss_dssp             GGEEEEEECCGGGGGGCEEEEEETTT-C----CEEEEEECCE--EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred             CCEEEEECCCCCccccCeEEEEECCC-C----eEEEEecCCC--CC--ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence            45788874      478999998642 2    2335667765  77  77776  46799987           256999


Q ss_pred             EeCCCCcEEEEEEecCCC---CCceeEEEEeCCE--EEEEEcC-CCeEEEEeCCccceeee-EeC
Q psy16020         86 VDPKSLVVLKSFDAHPRR---ESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAHTYQHLQD-VDI  143 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~---~~~I~~m~~~~~~--vwis~~~-d~~l~lwd~~t~~~l~~-idi  143 (151)
                      ||+.++++.+++......   ......|.++++|  ++++-.. ++.|.+||+.+.+.+.+ |++
T Consensus        86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~  150 (361)
T 2oiz_A           86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA  150 (361)
T ss_dssp             EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG
T ss_pred             EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC
Confidence            999999999999865211   2356778887555  5656544 78999999999999988 654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=98.11  E-value=0.00046  Score=53.31  Aligned_cols=117  Identities=13%  Similarity=0.058  Sum_probs=76.8

Q ss_pred             CCceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCC-------CCceEEEeee-CCEEEEEe--CC
Q psy16020         15 LDTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLP-------HHSVRSLAAV-YNKVWCGY--KN   81 (151)
Q Consensus        15 ~~~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~-------~~pV~~m~~v-~~~Lw~g~--~n   81 (151)
                      ...+..|.+.+  +++|++. .+|++.+|+...+|..  .....+.....       ...+.++++. ++++|++.  ++
T Consensus        85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~  162 (347)
T 3hfq_A           85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL--TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD  162 (347)
T ss_dssp             SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE--EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred             CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe--eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence            35677777664  3688888 6799999998755532  22222332211       1237788886 34588876  36


Q ss_pred             eEEEEeCC-CCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020         82 KIHVVDPK-SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        82 ~I~vid~~-t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~  133 (151)
                      +|++||.+ ++++.............+..++++++|  ++++...++.+++|+..
T Consensus       163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~  217 (347)
T 3hfq_A          163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD  217 (347)
T ss_dssp             EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence            89999988 666544332222223468889999665  67788899999999977

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.10  E-value=6.2e-05  Score=65.25  Aligned_cols=142  Identities=13%  Similarity=0.037  Sum_probs=92.9

Q ss_pred             CCCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC---CCCCceEEEeeeCCEEE
Q psy16020          4 PHPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG---LPHHSVRSLAAVYNKVW   76 (151)
Q Consensus         4 ~~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~---~~~~pV~~m~~v~~~Lw   76 (151)
                      ...+.+|+.++++.   -..-...++.||++..+|.|..++...+. .|..+........   .....-+.+++.+++|+
T Consensus        53 ~~~~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~  132 (677)
T 1kb0_A           53 KDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVY  132 (677)
T ss_dssp             GGEEEEEEEECCCCSCCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEE
T ss_pred             cCccEEEEEECCCCCCceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEE
Confidence            34577899988742   23344578999999999999999875322 3543321100000   00011244566789999


Q ss_pred             EEeC-CeEEEEeCCCCcEEEEEEecCCC--CCce-eEEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCCc
Q psy16020         77 CGYK-NKIHVVDPKSLVVLKSFDAHPRR--ESQV-RQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        77 ~g~~-n~I~vid~~t~~i~~~~~~h~~~--~~~I-~~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +++. ++++.+|++|+++.-++..+.+.  ...+ ..-...++.|++..+.     ++.|+.||++|++.+..++..+
T Consensus       133 v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~  210 (677)
T 1kb0_A          133 VGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP  210 (677)
T ss_dssp             EECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred             EEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCC
Confidence            9984 69999999999999888865110  0111 1222346777766553     7999999999999999998754

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.09  E-value=5.8e-05  Score=57.72  Aligned_cols=123  Identities=13%  Similarity=0.058  Sum_probs=82.6

Q ss_pred             CceeeeeeCCC-ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeCCe
Q psy16020          6 PTPYPLNKILD-TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNK   82 (151)
Q Consensus         6 ~~~l~~i~l~~-~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~n~   82 (151)
                      .+.+|....+. .+.++... ++.+|+|..+|.|..|+..  |.    ......+..  ..+.++.. .++.||+|+ +.
T Consensus       126 g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~--g~----~~~~~~~~~--~~~~~~~~d~~g~l~v~t-~~  196 (330)
T 3hxj_A          126 GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD--GT----EKWRFKTND--AITSAASIGKDGTIYFGS-DK  196 (330)
T ss_dssp             SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT--SC----EEEEEECSS--CCCSCCEECTTCCEEEES-SS
T ss_pred             CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC--CC----EeEEEecCC--CceeeeEEcCCCEEEEEe-CE
Confidence            45677777664 44555555 6789999988989888765  31    112334433  56667766 468899999 99


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |+.+| .+++...++....   ..+.++...++ .+|++.. ++.|..+|. +.+.+..+..
T Consensus       197 l~~~d-~~g~~~~~~~~~~---~~~~~~~~~~~g~l~v~t~-~~gl~~~~~-~g~~~~~~~~  252 (330)
T 3hxj_A          197 VYAIN-PDGTEKWNFYAGY---WTVTRPAISEDGTIYVTSL-DGHLYAINP-DGTEKWRFKT  252 (330)
T ss_dssp             EEEEC-TTSCEEEEECCSS---CCCSCCEECTTSCEEEEET-TTEEEEECT-TSCEEEEEEC
T ss_pred             EEEEC-CCCcEEEEEccCC---cceeceEECCCCeEEEEcC-CCeEEEECC-CCCEeEEeeC
Confidence            99999 7777766665443   36778888866 6687655 556666675 4666666553

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.06  E-value=6.7e-05  Score=62.07  Aligned_cols=112  Identities=9%  Similarity=-0.008  Sum_probs=85.2

Q ss_pred             eCCeEEEEecC-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         24 VQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        24 ~~~~v~vgl~n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      .++++||+-.+     |+|.+++..     +.+....+++|.  .|  .|.+.  +++||++.           +|.|.+
T Consensus        83 ~~~~vyV~n~~~~~~~~~VsVID~~-----t~~vv~~I~vG~--~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv  153 (426)
T 3c75_H           83 DARRVYIQDPAHFAAITQQFVIDGS-----TGRILGMTDGGF--LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEV  153 (426)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETT-----TTEEEEEEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCEEEEECCCcCCCCCeEEEEECC-----CCEEEEEEECCC--CC--ceEECCCCCEEEEEeccccccccCCCCCEEEE
Confidence            56789999874     699999875     345667889997  78  67776  36799987           368999


Q ss_pred             EeCCCCcEEEEEEec-C-CC--CCceeEEEEeCC--EEEEEEcC-CCeEEEEeCCccceeeeEeCC
Q psy16020         86 VDPKSLVVLKSFDAH-P-RR--ESQVRQMTWAGD--GVWVSIRL-DSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        86 id~~t~~i~~~~~~h-~-~~--~~~I~~m~~~~~--~vwis~~~-d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ||+.|+++.+++..- . +.  ......|.++++  .+|++-.. ++.|.+.|+.+.+.+.+|++.
T Consensus       154 iD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~  219 (426)
T 3c75_H          154 FDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP  219 (426)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred             EECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence            999999999999853 1 10  123556677755  46776554 789999999999999999874

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.01  E-value=0.00029  Score=60.01  Aligned_cols=108  Identities=8%  Similarity=0.059  Sum_probs=82.4

Q ss_pred             CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCC--CCcEEEEEE
Q psy16020         25 QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPK--SLVVLKSFD   98 (151)
Q Consensus        25 ~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~--t~~i~~~~~   98 (151)
                      .+.+||+.. +|+|.+++....     +....+++|.  . +..+.+.  ++.||++++ +.|++||+.  ++++..++.
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~-----~v~~~i~~g~--~-p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~  237 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTY-----EIKTVLDTGY--A-VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK  237 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTC-----CEEEEEECSS--C-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred             CceEEEEeCCCCeEEEEECCCC-----eEEEEEeCCC--C-ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence            456777764 578999987521     3345667764  3 3467775  467999985 699999996  999999988


Q ss_pred             ecCCCCCceeEEEEe------CCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         99 AHPRRESQVRQMTWA------GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        99 ~h~~~~~~I~~m~~~------~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ...    ....|.++      |..++++...++.+.++|+.|++.++.|.+.
T Consensus       238 ~G~----~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~  285 (567)
T 1qks_A          238 IGS----EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR  285 (567)
T ss_dssp             CCS----EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred             cCC----CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc
Confidence            653    45788887      3457888889999999999999999999864

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.00  E-value=0.0002  Score=57.57  Aligned_cols=66  Identities=14%  Similarity=0.103  Sum_probs=54.5

Q ss_pred             CCEEEEEeC-----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc-CCCeEEEEeCCccce
Q psy16020         72 YNKVWCGYK-----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH  137 (151)
Q Consensus        72 ~~~Lw~g~~-----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~-~d~~l~lwd~~t~~~  137 (151)
                      +++||++..           +.|.|||++|+++.+++....    ....|.++++|  .|++.. .++.|.+||+.|++.
T Consensus       278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v  353 (373)
T 2mad_H          278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC----CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence            478999863           579999999999999997542    57888888664  466666 699999999999999


Q ss_pred             eeeE
Q psy16020        138 LQDV  141 (151)
Q Consensus       138 l~~i  141 (151)
                      ++.|
T Consensus       354 v~~i  357 (373)
T 2mad_H          354 DQST  357 (373)
T ss_pred             Eeee
Confidence            9984

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=97.98  E-value=0.00013  Score=55.77  Aligned_cols=119  Identities=10%  Similarity=0.027  Sum_probs=78.3

Q ss_pred             CCceeeeeeCC-CceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCC
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKN   81 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n   81 (151)
                      ..+.+|....+ ..+.++...+ +.+|+|..+|.|..|+..  |.    .........  ..+.++... ++.||+|+.+
T Consensus       203 ~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~--g~----~~~~~~~~~--~~~~~~~~~~~g~l~v~t~~  274 (330)
T 3hxj_A          203 DGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD--GT----EKWRFKTGK--RIESSPVIGNTDTIYFGSYD  274 (330)
T ss_dssp             TSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT--SC----EEEEEECSS--CCCSCCEECTTSCEEEECTT
T ss_pred             CCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCC--CC----EeEEeeCCC--CccccceEcCCCeEEEecCC
Confidence            45677777776 5677887764 499999999999999542  21    122333332  333344554 6889999975


Q ss_pred             -eEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccc
Q psy16020         82 -KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        82 -~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                       .|+.+|+ +++....+....   ..+.++..+ +..+| .+..++.+++...+..+
T Consensus       275 ggl~~~d~-~g~~~~~~~~~~---~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~~~~  326 (330)
T 3hxj_A          275 GHLYAINP-DGTEKWNFETGS---WIIATPVIDENGTIY-FGTRNGKFYALFNLEHH  326 (330)
T ss_dssp             CEEEEECT-TSCEEEEEECSS---CCCSCCEECTTCCEE-EECTTSCEEEEEC----
T ss_pred             CCEEEECC-CCcEEEEEEcCC---ccccceEEcCCCEEE-EEcCCCeEEEEeccccc
Confidence             8999997 788777776543   367777774 44556 47788888887776543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=97.98  E-value=2.6e-05  Score=62.14  Aligned_cols=68  Identities=12%  Similarity=0.172  Sum_probs=53.7

Q ss_pred             Eeee--CCEEEEEeC------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeC
Q psy16020         68 LAAV--YNKVWCGYK------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNA  132 (151)
Q Consensus        68 m~~v--~~~Lw~g~~------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~  132 (151)
                      +++.  ++++|+++.            +.|.+||++|+++.+++..+.     +..|+++++|- +++..+ +.|.+||+
T Consensus       259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-----p~~ia~spdg~~l~v~n~-~~v~v~D~  332 (361)
T 2oiz_A          259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-----ALSMTIDQQRNLMLTLDG-GNVNVYDI  332 (361)
T ss_dssp             EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-----CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred             EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-----eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence            4444  478998763            489999999999999999873     78888886543 223334 99999999


Q ss_pred             Ccc--ceeeeE
Q psy16020        133 HTY--QHLQDV  141 (151)
Q Consensus       133 ~t~--~~l~~i  141 (151)
                      .|+  +.++.|
T Consensus       333 ~t~~l~~~~~i  343 (361)
T 2oiz_A          333 SQPEPKLLRTI  343 (361)
T ss_dssp             SSSSCEEEEEE
T ss_pred             CCCcceeeEEe
Confidence            999  999887

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=97.98  E-value=0.001  Score=51.63  Aligned_cols=124  Identities=8%  Similarity=0.046  Sum_probs=78.1

Q ss_pred             eeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCC---CC-CCcc---eEEEeCCCCCceEEEeeeC--CEEEEEe--CCeE
Q psy16020         18 ALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQ---WD-LSKY---HTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKI   83 (151)
Q Consensus        18 V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~---wd-~~~~---~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I   83 (151)
                      +.++.+.+  +++|++. .++.|.+|+....+.   .. +...   ..+.+.. ....+.+++..  +.||+++  +++|
T Consensus       157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v  235 (361)
T 3scy_A          157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-GSGPRHLIFNSDGKFAYLINEIGGTV  235 (361)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred             ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-CCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence            35566654  3577665 478999998864331   00 1111   2333332 24457888863  4699988  4689


Q ss_pred             EEEeCCCCcEE--EEEEecCCCCCceeEEEEeCCE--EEEEEcC-CCeEEEEeCC--c--cceeeeEe
Q psy16020         84 HVVDPKSLVVL--KSFDAHPRRESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAH--T--YQHLQDVD  142 (151)
Q Consensus        84 ~vid~~t~~i~--~~~~~h~~~~~~I~~m~~~~~~--vwis~~~-d~~l~lwd~~--t--~~~l~~id  142 (151)
                      .+||.++++..  .++............+.++++|  ++++.+. ++.|.+|+..  +  .+.+..+.
T Consensus       236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~  303 (361)
T 3scy_A          236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL  303 (361)
T ss_dssp             EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE
T ss_pred             EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec
Confidence            99999887653  3444443333457899998665  5667777 7999999985  3  34555554

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=97.97  E-value=0.0009  Score=51.60  Aligned_cols=117  Identities=11%  Similarity=0.103  Sum_probs=75.7

Q ss_pred             ceeeeEEeCC--eEEEE-ecCCcEEEEEcCC-CCCCCCCcceEEEeCCC----CCceEEEeeeC--CEEEEEe--CCeEE
Q psy16020         17 TALPPVHVQG--RVVCA-LADGSVAIFRRGP-DGQWDLSKYHTVTLGLP----HHSVRSLAAVY--NKVWCGY--KNKIH   84 (151)
Q Consensus        17 ~V~~i~~~~~--~v~vg-l~nG~l~v~~~~~-~~~wd~~~~~~i~l~~~----~~pV~~m~~v~--~~Lw~g~--~n~I~   84 (151)
                      .+..+.+.++  ++|++ ..+|.+.+|+... .|.+  .....+.....    ...++.+++..  +.||+++  ++.|.
T Consensus       188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~  265 (347)
T 3hfq_A          188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF--TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA  265 (347)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE--EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred             CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce--EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence            5666777643  58875 5678999998753 2321  11112221110    13467787763  4698876  36899


Q ss_pred             EEeCC---CCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEE--eCCcccee
Q psy16020         85 VVDPK---SLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMY--NAHTYQHL  138 (151)
Q Consensus        85 vid~~---t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lw--d~~t~~~l  138 (151)
                      +||.+   +++....+..+.   ..+..++++++|  ++++...++.+.+|  |..++++.
T Consensus       266 v~~~~~~g~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          266 VFAVTADGHLTLIQQISTEG---DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             EEEECGGGCEEEEEEEECSS---SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EEEECCCCcEEEeEEEecCC---CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence            99987   445666666653   368889998665  57777778999999  77776665

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=97.94  E-value=0.0024  Score=49.49  Aligned_cols=124  Identities=16%  Similarity=0.228  Sum_probs=75.8

Q ss_pred             CceeeeEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEe-CCC-------CCceEEEeeeC--CEEEEEe--CCe
Q psy16020         16 DTALPPVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL-GLP-------HHSVRSLAAVY--NKVWCGY--KNK   82 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~-------~~pV~~m~~v~--~~Lw~g~--~n~   82 (151)
                      ..+..+...++++|++. .+|.|.+|+...++... .....+.. +..       ...+.++.+..  +.|++++  .+.
T Consensus       100 ~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  178 (361)
T 3scy_A          100 ADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALL-PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ  178 (361)
T ss_dssp             SCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBC-SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred             CCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCc-ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence            45556666555688876 57899999987655321 11122222 110       12247777763  4688887  368


Q ss_pred             EEEEeCC--CC----c-EE-----EEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc--eeeeEe
Q psy16020         83 IHVVDPK--SL----V-VL-----KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ--HLQDVD  142 (151)
Q Consensus        83 I~vid~~--t~----~-i~-----~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~--~l~~id  142 (151)
                      |++|+.+  ++    + +.     ..+...  ....+.+++++++|  ++++...++.|++||..+++  .++.+.
T Consensus       179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~  252 (361)
T 3scy_A          179 IHKFNINPNANADNKEKFLTKGTPEAFKVA--PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA  252 (361)
T ss_dssp             EEEEEECTTCCTTTCCCCEEEEEEEEEECC--TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEEcCCCCcccccceeecccccceecC--CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence            8888755  33    2 22     223322  23468899999775  67777789999999988654  345443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=97.94  E-value=0.0017  Score=48.70  Aligned_cols=128  Identities=9%  Similarity=0.055  Sum_probs=84.3

Q ss_pred             CceeeeeeCC--CceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe-
Q psy16020          6 PTPYPLNKIL--DTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY-   79 (151)
Q Consensus         6 ~~~l~~i~l~--~~V~~i~~~-~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~-   79 (151)
                      .+.++.+..+  ..+.+|... ++++|++. .++.|.+|+..  |.    ....+........++.|++. ++++|++. 
T Consensus       109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~----~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~  182 (286)
T 1q7f_A          109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GN----VLHKFGCSKHLEFPNGVVVNDKQEIFISDN  182 (286)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SC----EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred             CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CC----EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence            4455555443  367788775 45788885 46789998743  21    11222222212456788886 47899987 


Q ss_pred             -CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCC-eEEEEeCCccceeeeEe
Q psy16020         80 -KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDS-TLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 -~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~-~l~lwd~~t~~~l~~id  142 (151)
                       .+.|++||+ +++...++..+. ....+..|+.+++ .+|++...++ .|++||.. .+.+..+.
T Consensus       183 ~~~~i~~~~~-~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~  245 (286)
T 1q7f_A          183 RAHCVKVFNY-EGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALE  245 (286)
T ss_dssp             GGTEEEEEET-TCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEE
T ss_pred             CCCEEEEEcC-CCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEc
Confidence             469999998 456666665432 1247889999865 4699998886 99999964 66666664

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.93  E-value=0.0003  Score=61.01  Aligned_cols=140  Identities=14%  Similarity=0.078  Sum_probs=90.0

Q ss_pred             CCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC--C-CCCceEEEeeeCCEEEE
Q psy16020          5 HPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG--L-PHHSVRSLAAVYNKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~--~-~~~pV~~m~~v~~~Lw~   77 (151)
                      ..+.+|+.++++.   ...-...++.||++..+|.|..++...+. .|..+........  . +...-+..++.+++|++
T Consensus        47 ~l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v  126 (689)
T 1yiq_A           47 QLGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYV  126 (689)
T ss_dssp             GEEEEEEEECSSCSCCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEE
T ss_pred             CceEEEEEECCCCCCceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEE
Confidence            3467898888742   23334578899999999999999975332 3644321100000  0 00011344667899999


Q ss_pred             Ee-CCeEEEEeCCCCcEEEEEEec--CCCCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeEeCC
Q psy16020         78 GY-KNKIHVVDPKSLVVLKSFDAH--PRRESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        78 g~-~n~I~vid~~t~~i~~~~~~h--~~~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ++ +++|+.+|++|+++.-++...  ......+. .-...++.|++..+     .++.|+.||++|++.+-.++..
T Consensus       127 ~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~  202 (689)
T 1yiq_A          127 GVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTV  202 (689)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred             EccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEeccc
Confidence            99 579999999999998887753  11111111 11234666666544     3789999999999999988753

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=97.92  E-value=0.00032  Score=56.66  Aligned_cols=92  Identities=13%  Similarity=0.040  Sum_probs=64.5

Q ss_pred             CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-C---CeEEEEeCCCCcEEEEEEecCCCCCcee
Q psy16020         35 GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-K---NKIHVVDPKSLVVLKSFDAHPRRESQVR  108 (151)
Q Consensus        35 G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~  108 (151)
                      ++|.+|+..  +    .....+.-.  ..+|.++.+..  +.|..++ +   ..|++||+++++.. .+..|..   .+.
T Consensus       159 ~~i~i~d~~--g----~~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~---~~~  226 (415)
T 2hqs_A          159 YELRVSDYD--G----YNQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPR---HNG  226 (415)
T ss_dssp             EEEEEEETT--S----CSCEEEEEE--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSS---CEE
T ss_pred             ceEEEEcCC--C----CCCEEEeCC--CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCC---ccc
Confidence            689999864  2    223343333  38899999973  5666665 3   38999999999885 4666653   799


Q ss_pred             EEEEeCCEE--EEEEcCC--CeEEEEeCCcccee
Q psy16020        109 QMTWAGDGV--WVSIRLD--STLRMYNAHTYQHL  138 (151)
Q Consensus       109 ~m~~~~~~v--wis~~~d--~~l~lwd~~t~~~l  138 (151)
                      ++.++++|-  .++.+.+  ..|++||..+.+..
T Consensus       227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~  260 (415)
T 2hqs_A          227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR  260 (415)
T ss_dssp             EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred             CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE
Confidence            999997764  4455554  45999999987653

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=97.92  E-value=0.0019  Score=48.49  Aligned_cols=120  Identities=12%  Similarity=0.102  Sum_probs=80.2

Q ss_pred             ceeeeeeCC---CceeeeEEeC-CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeee-CCEEEEE
Q psy16020          7 TPYPLNKIL---DTALPPVHVQ-GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAV-YNKVWCG   78 (151)
Q Consensus         7 ~~l~~i~l~---~~V~~i~~~~-~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v-~~~Lw~g   78 (151)
                      +.+..+..+   ..+..|...+ +++|++.. ++.|.+|+..  +.      ....++..  ....+.|++- +++||++
T Consensus       152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~------~~~~~~~~g~~~~p~~i~~d~~G~l~v~  223 (286)
T 1q7f_A          152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQ------YLRQIGGEGITNYPIGVGINSNGEILIA  223 (286)
T ss_dssp             CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CC------EEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred             CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CC------EEEEEccCCccCCCcEEEECCCCCEEEE
Confidence            344455432   3577787764 68998864 7899999863  21      12233321  1345777775 4789998


Q ss_pred             eC--C-eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccce
Q psy16020         79 YK--N-KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        79 ~~--n-~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~  137 (151)
                      ..  + +|++||+ +++..+++..+.. ...+..++.+++| +|++ +.++.|++|+.....+
T Consensus       224 ~~~~~~~i~~~~~-~g~~~~~~~~~~~-~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p  283 (286)
T 1q7f_A          224 DNHNNFNLTIFTQ-DGQLISALESKVK-HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP  283 (286)
T ss_dssp             ECSSSCEEEEECT-TSCEEEEEEESSC-CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred             eCCCCEEEEEECC-CCCEEEEEcccCC-CCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence            83  4 8999996 5777788887643 2357788888664 5777 5689999999876443

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=97.91  E-value=0.0013  Score=51.16  Aligned_cols=112  Identities=11%  Similarity=0.113  Sum_probs=75.8

Q ss_pred             eeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC---------CeEEE
Q psy16020         18 ALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK---------NKIHV   85 (151)
Q Consensus        18 V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~---------n~I~v   85 (151)
                      +..|...+  +++|++- .++.|.+|+... |.    ....+........+..+.+..+.++...+         ++|++
T Consensus       198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~----~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~  272 (329)
T 3fvz_A          198 PHSLALVPHLDQLCVADRENGRIQCFKTDT-KE----FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFV  272 (329)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTT-CC----EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEE
T ss_pred             CcEEEEECCCCEEEEEECCCCEEEEEECCC-Cc----EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEE
Confidence            67777764  6888886 467899998752 21    11222222222455555555444443332         48999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCc
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t  134 (151)
                      ||..++++..++.........+..|+++++| +|++...+..|++|+...
T Consensus       273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            9999999999986333334578999999775 799999999999999864

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.91  E-value=0.00029  Score=60.91  Aligned_cols=140  Identities=12%  Similarity=0.045  Sum_probs=90.6

Q ss_pred             CCceeeeeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC--CCCCc-eEEEeeeCCEEEE
Q psy16020          5 HPTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG--LPHHS-VRSLAAVYNKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~--~~~~p-V~~m~~v~~~Lw~   77 (151)
                      ..+.+|+.++++.   -..-...++.||++..+|.|..++...+. .|..+.......+  ....+ -+..++.+++|++
T Consensus        43 ~l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  122 (668)
T 1kv9_A           43 SLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYV  122 (668)
T ss_dssp             GEEEEEEEECSCCSCCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEE
T ss_pred             CcceEEEEECCCCCCcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEE
Confidence            4567888888742   23334578899999999999999975332 3644321110000  00011 1345567899999


Q ss_pred             Ee-CCeEEEEeCCCCcEEEEEEecCCC-CCcee-EEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCC
Q psy16020         78 GY-KNKIHVVDPKSLVVLKSFDAHPRR-ESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        78 g~-~n~I~vid~~t~~i~~~~~~h~~~-~~~I~-~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ++ +++|+.+|++|+++.-++...... ...+. .-...++.|++..+.     ++.|+.+|++|++.+..++..
T Consensus       123 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~  197 (668)
T 1kv9_A          123 GTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV  197 (668)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred             EcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc
Confidence            99 579999999999998888753110 01111 112346677765543     689999999999999998763

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=97.87  E-value=0.00034  Score=57.22  Aligned_cols=75  Identities=16%  Similarity=0.199  Sum_probs=60.7

Q ss_pred             CCEEEEEe-----------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccce
Q psy16020         72 YNKVWCGY-----------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        72 ~~~Lw~g~-----------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~  137 (151)
                      +++||++.           ++.|.|+|++|+++++++..-.    .+..|.++.++   ++++.+.++.|.++|+.|++.
T Consensus       291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~  366 (386)
T 3sjl_D          291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE  366 (386)
T ss_dssp             TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred             CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence            58899985           2689999999999999998753    67888998664   355567799999999999999


Q ss_pred             eeeEeCCcccccc
Q psy16020        138 LQDVDIEPYVSKM  150 (151)
Q Consensus       138 l~~idi~~~v~~~  150 (151)
                      +..|+.-..=+.|
T Consensus       367 ~~~i~~~~~p~~l  379 (386)
T 3sjl_D          367 LRSVNQLGHGPQV  379 (386)
T ss_dssp             EEEECCCCSSCCE
T ss_pred             EEEecCCCCCcee
Confidence            9999765543333

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.87  E-value=0.0006  Score=57.94  Aligned_cols=142  Identities=10%  Similarity=-0.042  Sum_probs=89.7

Q ss_pred             CCceeeeeeCCCc---eeeeEEeCCeEEEEec-CCcEEEEEc-CCCC-CCCCCcceEEEeC---CCCCceEEEeeeCCEE
Q psy16020          5 HPTPYPLNKILDT---ALPPVHVQGRVVCALA-DGSVAIFRR-GPDG-QWDLSKYHTVTLG---LPHHSVRSLAAVYNKV   75 (151)
Q Consensus         5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~-nG~l~v~~~-~~~~-~wd~~~~~~i~l~---~~~~pV~~m~~v~~~L   75 (151)
                      ..+.+|+.+++..   -..-...++.||++.. +|.|..++. ..+. .|..+........   .+...-+..++.+++|
T Consensus        39 ~l~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  118 (571)
T 2ad6_A           39 NVKAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQI  118 (571)
T ss_dssp             GCEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEE
T ss_pred             CccEEEEEECCCCCCcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEE
Confidence            3467888888631   1334457889999999 899999997 4322 3543221100000   0000012345678999


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCCcc
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      ++++. ++++.+|++|+++.-++..... ....+. .-...++.|++....     ++.|+.+|++|++.+.+++..+.
T Consensus       119 ~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~  197 (571)
T 2ad6_A          119 VKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGS  197 (571)
T ss_dssp             EEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred             EEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCC
Confidence            99985 6899999999998877764310 000111 112346667766553     79999999999999999987653

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=97.76  E-value=0.00096  Score=53.59  Aligned_cols=111  Identities=10%  Similarity=0.023  Sum_probs=76.9

Q ss_pred             eCCeEEEEec--CC---cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         24 VQGRVVCALA--DG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        24 ~~~~v~vgl~--nG---~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      .++++|+.-.  .+   +|.+|+...     .+....++.|.  .|  .+.+.  ++.||++.           +|.|.+
T Consensus        31 ~~~~~yv~~~~~~~~~~~v~v~D~~t-----~~~~~~i~~g~--~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v  101 (373)
T 2mad_H           31 DGRRSYINLPAHHSAIIQQWVLDAGS-----GSILGHVNGGF--LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV  101 (373)
T ss_pred             CCCEEEEeCCcccCCccEEEEEECCC-----CeEEEEecCCC--CC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence            3457888754  22   788988752     23345667775  67  66665  46799986           468999


Q ss_pred             EeCCCCcEEEEEEec-C-CC--CCceeEEEEeCCE--EEEEEcC-CCeEEEEeCCccceeee-EeCC
Q psy16020         86 VDPKSLVVLKSFDAH-P-RR--ESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAHTYQHLQD-VDIE  144 (151)
Q Consensus        86 id~~t~~i~~~~~~h-~-~~--~~~I~~m~~~~~~--vwis~~~-d~~l~lwd~~t~~~l~~-idi~  144 (151)
                      ||+.|+++..++..- . +.  ......+.++++|  +|++-.+ ++.|.++| .+.+.+++ |++.
T Consensus       102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~  167 (373)
T 2mad_H          102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP  167 (373)
T ss_pred             EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence            999999999988753 1 00  1234577777554  5655544 68899999 99999999 8763

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=97.75  E-value=0.0023  Score=48.93  Aligned_cols=110  Identities=9%  Similarity=0.041  Sum_probs=74.9

Q ss_pred             CCceeeeEEe-CCeEEEEecCC-----cEEEEEcCCCCCCCCCcce-EEEeCCCCCceEEEeee-CCEEEEEeC------
Q psy16020         15 LDTALPPVHV-QGRVVCALADG-----SVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAV-YNKVWCGYK------   80 (151)
Q Consensus        15 ~~~V~~i~~~-~~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~-~i~l~~~~~pV~~m~~v-~~~Lw~g~~------   80 (151)
                      +..+.+|... ++++|++..++     .|.+|+... +     ... .+.-..+...++.+.+. ++++|++..      
T Consensus        86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~-----~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~  159 (333)
T 2dg1_A           86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-D-----NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN  159 (333)
T ss_dssp             SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-C-----SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred             CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-C-----EEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence            4678888875 55788887554     788887542 1     111 11111122567888776 578999874      


Q ss_pred             --CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020         81 --NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        81 --n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t  134 (151)
                        +.|+.+|++++++.......    ..++.+.++++  .+|++...++.|.+||..+
T Consensus       160 ~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~  213 (333)
T 2dg1_A          160 PLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWVTETTANRLHRIALED  213 (333)
T ss_dssp             CCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             CCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence              47999999887776544322    25788888866  4788888899999999864

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=97.75  E-value=0.00047  Score=56.31  Aligned_cols=113  Identities=12%  Similarity=0.011  Sum_probs=79.7

Q ss_pred             ceeeeEE--eCCeEEEEecCCcEEEEEcCCCC------CCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeC
Q psy16020         17 TALPPVH--VQGRVVCALADGSVAIFRRGPDG------QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDP   88 (151)
Q Consensus        17 ~V~~i~~--~~~~v~vgl~nG~l~v~~~~~~~------~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~   88 (151)
                      ++..|..  ..+.+|+|..+ .+.+|+.....      .-+++....+++.   . |+.|.+-++.|+++.++.|++||.
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp---~-V~~l~fd~~~L~v~~~~~l~v~dv  113 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP---D-VIFVCFHGDQVLVSTRNALYSLDL  113 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT---T-EEEEEEETTEEEEEESSEEEEEES
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC---C-eeEEEECCCEEEEEcCCcEEEEEc
Confidence            4555544  45567777766 45558754100      0013322344542   4 999999557899998889999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      .++....++..|+.   .+..+...+.. .+.+..|+.|.+||..+.+..
T Consensus       114 ~sl~~~~~~~~~~~---~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~  159 (388)
T 1xip_A          114 EELSEFRTVTSFEK---PVFQLKNVNNT-LVILNSVNDLSALDLRTKSTK  159 (388)
T ss_dssp             SSTTCEEEEEECSS---CEEEEEECSSE-EEEEETTSEEEEEETTTCCEE
T ss_pred             hhhhccCccceeec---ceeeEEecCCC-EEEEECCCCEEEEEccCCccc
Confidence            99997778887853   68888887766 777899999999999977654

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.75  E-value=0.002  Score=55.78  Aligned_cols=137  Identities=13%  Similarity=0.187  Sum_probs=90.7

Q ss_pred             CCCCceeeeeeCC-C-----cee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcceEEEeCCCC------
Q psy16020          3 YPHPTPYPLNKIL-D-----TAL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTVTLGLPH------   62 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~-----~V~-~i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~------   62 (151)
                      ..+.+.+|+.++. +     .+. .....++.||++..      +|.|.+|+...+. .|.+      ....+.      
T Consensus       145 ~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~------~~~~~~~~~~~~  218 (677)
T 1kb0_A          145 AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW------FSVPGDPSKPFE  218 (677)
T ss_dssp             TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE------ESSCCCTTSCCS
T ss_pred             CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe------ccCCCCcccccc
Confidence            3577889999886 3     222 23446889999986      6899999975432 3432      221100      


Q ss_pred             ------------------------CceEEEee--eCCEEEEEeCC--------------------eEEEEeCCCCcEEEE
Q psy16020         63 ------------------------HSVRSLAA--VYNKVWCGYKN--------------------KIHVVDPKSLVVLKS   96 (151)
Q Consensus        63 ------------------------~pV~~m~~--v~~~Lw~g~~n--------------------~I~vid~~t~~i~~~   96 (151)
                                              .....+++  .++.||++.++                    .|+.+|++|+++.-.
T Consensus       219 ~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~  298 (677)
T 1kb0_A          219 DESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH  298 (677)
T ss_dssp             SHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE
T ss_pred             ccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE
Confidence                                    11123344  35889999875                    499999999999988


Q ss_pred             EEecCC-------CCCc-eeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         97 FDAHPR-------RESQ-VRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        97 ~~~h~~-------~~~~-I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++....       ...+ +..+...|.  .+++...+++.|+++|.+|++++..+.+.+
T Consensus       299 ~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~  357 (677)
T 1kb0_A          299 YQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP  357 (677)
T ss_dssp             EESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred             EecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence            885321       0112 222222332  568899999999999999999999887654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.74  E-value=0.0067  Score=45.06  Aligned_cols=121  Identities=12%  Similarity=0.121  Sum_probs=84.1

Q ss_pred             CceeeeeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe
Q psy16020          6 PTPYPLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY   79 (151)
Q Consensus         6 ~~~l~~i~l~---~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~   79 (151)
                      +..+.++.+|   ..+.+|... ++++|++.. +|.|.+|+..  +.     ...+.+......+.+|+.- ++.+|++.
T Consensus         7 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~--~~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~   79 (300)
T 2qc5_A            7 NFYLEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS--GR-----IKEFEVPTPDAKVMCLIVSSLGDIWFTE   79 (300)
T ss_dssp             SEEEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-----EEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred             eeeEEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC--Cc-----eEEEECCCCCCcceeEEECCCCCEEEEe
Confidence            3456777776   377888775 468999984 6889999754  32     1234443322567777775 47899998


Q ss_pred             C--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccce
Q psy16020         80 K--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        80 ~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      .  +.|+.+|++ ++.. .+... .....+..|+..+ ..+|++...++.|..||.. .+.
T Consensus        80 ~~~~~v~~~d~~-g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~  136 (300)
T 2qc5_A           80 NGANKIGKLSKK-GGFT-EYPLP-QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI  136 (300)
T ss_dssp             TTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred             cCCCeEEEECCC-CCeE-EecCC-CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence            5  689999998 7763 44422 1235789999884 4579998888999999987 443

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=97.74  E-value=0.00099  Score=50.35  Aligned_cols=112  Identities=6%  Similarity=0.020  Sum_probs=76.2

Q ss_pred             eeeeEEe----CC--eEEEEe-cCCcEEEEEcCCCCCCCCCcceEE-EeCCCC-CceEEEeee-CCEEEEEe--CCeEEE
Q psy16020         18 ALPPVHV----QG--RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTV-TLGLPH-HSVRSLAAV-YNKVWCGY--KNKIHV   85 (151)
Q Consensus        18 V~~i~~~----~~--~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~-~pV~~m~~v-~~~Lw~g~--~n~I~v   85 (151)
                      +..|...    ++  .+|++. .++.|.+|+...+|..  .....+ .+.... .....|++- +++||++.  ++.|++
T Consensus       174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~--~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~  251 (314)
T 1pjx_A          174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI--ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE--EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc--ccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence            4455555    33  688885 5788999986422321  111122 233211 335667765 47899996  468999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t  134 (151)
                      ||+++++....+..+.   ..+.++.++++  .+|++...++.|..||..+
T Consensus       252 ~d~~~g~~~~~~~~~~---~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          252 FGPDGGQPKMRIRCPF---EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             ECTTCBSCSEEEECSS---SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EcCCCCcEeEEEeCCC---CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            9999888888887664   37889988754  3899999999999999875

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=97.73  E-value=0.001  Score=53.64  Aligned_cols=122  Identities=7%  Similarity=-0.050  Sum_probs=77.5

Q ss_pred             CCceeeeeeCCCceeeeEEeCC--eEE-EEecCCc--EEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEE
Q psy16020          5 HPTPYPLNKILDTALPPVHVQG--RVV-CALADGS--VAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~~--~v~-vgl~nG~--l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~   77 (151)
                      +.++..-...+..+.++.+.++  +++ ++..+|.  |.+|+...        .+...+......+.++.+..  +.|+.
T Consensus       212 tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~--------~~~~~l~~~~~~~~~~~~spdg~~l~~  283 (415)
T 2hqs_A          212 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS--------GQIRQVTDGRSNNTEPTWFPDSQNLAF  283 (415)
T ss_dssp             TCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--------CCEEECCCCSSCEEEEEECTTSSEEEE
T ss_pred             CCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC--------CCEEeCcCCCCcccceEECCCCCEEEE
Confidence            3444433335567888888753  344 5555665  66665432        22334544447889998863  56887


Q ss_pred             EeC-C---eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EEEEcC--CCeEEEEeCCcccee
Q psy16020         78 GYK-N---KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WVSIRL--DSTLRMYNAHTYQHL  138 (151)
Q Consensus        78 g~~-n---~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wis~~~--d~~l~lwd~~t~~~l  138 (151)
                      ++. +   +|+++|+.+++.. .+..|.   ..+..+.++++|-  ..+...  +..|++||..+.+..
T Consensus       284 ~s~~~g~~~i~~~d~~~~~~~-~l~~~~---~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~  348 (415)
T 2hqs_A          284 TSDQAGRPQVYKVNINGGAPQ-RITWEG---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ  348 (415)
T ss_dssp             EECTTSSCEEEEEETTSSCCE-ECCCSS---SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred             EECCCCCcEEEEEECCCCCEE-EEecCC---CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence            774 2   7999999998854 344443   3788899987764  333333  368999999987663

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=97.73  E-value=0.0015  Score=47.92  Aligned_cols=119  Identities=10%  Similarity=0.022  Sum_probs=76.0

Q ss_pred             CCceeeeeeCCCceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--
Q psy16020          5 HPTPYPLNKILDTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--   79 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--   79 (151)
                      +.+.......+..|.++.+.++ +.++...+|.|.+|+....+     .+..+.-+....++.++.+..  ..|++++  
T Consensus        31 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~  105 (297)
T 2ojh_A           31 TRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDP-----SPEKVDTGFATICNNDHGISPDGALYAISDKV  105 (297)
T ss_dssp             TTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCC-----SCEECCCTTCCCBCSCCEECTTSSEEEEEECT
T ss_pred             CCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCC-----CceEeccccccccccceEECCCCCEEEEEEeC
Confidence            3344444455678889988753 33444459999999875312     112222222236788888863  5677777  


Q ss_pred             ---CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020         80 ---KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        80 ---~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~  133 (151)
                         ..+|+.+|.++++. +.+..+.    .+..+.+++++  +.++...++.+++|+..
T Consensus       106 ~~~~~~l~~~~~~~~~~-~~~~~~~----~~~~~~~spdg~~l~~~~~~~~~~~l~~~~  159 (297)
T 2ojh_A          106 EFGKSAIYLLPSTGGTP-RLMTKNL----PSYWHGWSPDGKSFTYCGIRDQVFDIYSMD  159 (297)
T ss_dssp             TTSSCEEEEEETTCCCC-EECCSSS----SEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             CCCcceEEEEECCCCce-EEeecCC----CccceEECCCCCEEEEEECCCCceEEEEEE
Confidence               25899999888774 4444332    48888888655  45578889999999853

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.72  E-value=8e-06  Score=65.48  Aligned_cols=129  Identities=16%  Similarity=0.071  Sum_probs=63.3

Q ss_pred             CCCCceeeeeeCCCceeee-EEeCCeEEEE-ecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          3 YPHPTPYPLNKILDTALPP-VHVQGRVVCA-LADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i-~~~~~~v~vg-l~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      ..+.+.+|+.+. +.+.+. ...++.+|++ ..||.|.+|+...+ ..|..+....-.+..  .|+.   ..++.|++|+
T Consensus        26 ~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~--sp~~---~~~~~v~~g~   99 (369)
T 2hz6_A           26 KRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA--SPCR---SSDGILYMGK   99 (369)
T ss_dssp             TTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT--CSCC--------CCCCE
T ss_pred             CCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc--CceE---ecCCEEEEEe
Confidence            457889999988 555544 3345555554 78999999987432 334332110000111  3422   1467788887


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      . +.|+.||++|++.+.++..+..    +. +.- .++..++++.++.|+.||+++++.+..++.
T Consensus       100 ~dg~v~a~D~~tG~~~w~~~~~~~----~~-~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~  158 (369)
T 2hz6_A          100 KQDIWYVIDLLTGEKQQTLSSAFA----DS-LSP-STSLLYLGRTEYTITMYDTKTRELRWNATY  158 (369)
T ss_dssp             EEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred             CCCEEEEEECCCCcEEEEecCCCc----cc-ccc-cCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence            5 6899999999999888876631    11 111 344455778899999999999998877753

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=97.70  E-value=0.0032  Score=46.86  Aligned_cols=118  Identities=14%  Similarity=0.170  Sum_probs=80.9

Q ss_pred             eeeeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--
Q psy16020          9 YPLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--   80 (151)
Q Consensus         9 l~~i~l~---~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--   80 (151)
                      +..+++|   ..+.+|... ++++|++.. +|.|.+|+..  +.     ...+.+......+.+|++- ++.+|++..  
T Consensus         5 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~--~~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~   77 (299)
T 2z2n_A            5 LQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD--GK-----ITEYPLPTPDAKVMCLTISSDGEVWFTENAA   77 (299)
T ss_dssp             EEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT--CC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred             EEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC--CC-----eEEecCCcccCceeeEEECCCCCEEEeCCCC
Confidence            4556666   478888875 468999987 6789998764  32     2233333223567788874 578999974  


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      +.|+.+|++ ++. +.+... .....+..|...++ .+|++...++.|..||. +.+.
T Consensus        78 ~~i~~~~~~-g~~-~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~  131 (299)
T 2z2n_A           78 NKIGRITKK-GII-KEYTLP-NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI  131 (299)
T ss_dssp             TEEEEECTT-SCE-EEEECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred             CeEEEECCC-CcE-EEEeCC-CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence            589999987 554 334422 12357899999854 57999988999999998 4443

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=97.69  E-value=0.0048  Score=45.85  Aligned_cols=112  Identities=13%  Similarity=0.178  Sum_probs=76.9

Q ss_pred             CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCC
Q psy16020         16 DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t   90 (151)
                      ..+.+|... ++.+|++.. +|.|..|+..  +.     ...+.+......+.+|++. +++||++.  ++.|+++|+ +
T Consensus        57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~  128 (299)
T 2z2n_A           57 AKVMCLTISSDGEVWFTENAANKIGRITKK--GI-----IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D  128 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred             CceeeEEECCCCCEEEeCCCCCeEEEECCC--Cc-----EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence            467788774 568999876 6788888753  32     2334443222556788776 47899987  468999999 7


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      ++.... .. ......+..|+.+++ .+|++...++.|..||. +.+..
T Consensus       129 g~~~~~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~  174 (299)
T 2z2n_A          129 GKIREY-EL-PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT  174 (299)
T ss_dssp             CCEEEE-EC-SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred             CCEEEe-cC-CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence            766533 21 112347899999855 57999888899999998 65544

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=97.69  E-value=0.00096  Score=55.10  Aligned_cols=66  Identities=14%  Similarity=0.248  Sum_probs=54.5

Q ss_pred             CCEEEEEeC-----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc-CCCeEEEEeCCccce
Q psy16020         72 YNKVWCGYK-----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH  137 (151)
Q Consensus        72 ~~~Lw~g~~-----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~-~d~~l~lwd~~t~~~  137 (151)
                      +++||++..           |.|.|||+.|+++.+++....    ....|.++.+|  .|++.. .++.|.++|+.|++.
T Consensus       330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv  405 (426)
T 3c75_H          330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE  405 (426)
T ss_dssp             GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred             CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence            588999862           579999999999999998753    57788888543  455555 699999999999999


Q ss_pred             eeeE
Q psy16020        138 LQDV  141 (151)
Q Consensus       138 l~~i  141 (151)
                      ++.|
T Consensus       406 v~tI  409 (426)
T 3c75_H          406 LRSV  409 (426)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9998

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.69  E-value=0.00026  Score=57.33  Aligned_cols=108  Identities=10%  Similarity=-0.027  Sum_probs=77.6

Q ss_pred             eCCeEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         24 VQGRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        24 ~~~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      ...++||.-..+     +|.|++..     ..+....+++|.  .|  .+.+.  +++||+++           +|.|.+
T Consensus        30 ~~~~~yV~~~~~~~~~d~vsvID~~-----t~~v~~~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv  100 (368)
T 1mda_H           30 ISRRSHITLPAYFAGTTENWVSCAG-----CGVTLGHSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEV  100 (368)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETT-----TTEEEEEEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred             CCCeEEEECCccCCccceEEEEECC-----CCeEEEEEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence            456899987654     78899865     224557789987  78  57775  46799997           478999


Q ss_pred             EeCCCCcEEEEEEecCCC----CCceeEEEEeCCE--EEEEEcC-CCeEEE--EeCCccceeeeEeC
Q psy16020         86 VDPKSLVVLKSFDAHPRR----ESQVRQMTWAGDG--VWVSIRL-DSTLRM--YNAHTYQHLQDVDI  143 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~----~~~I~~m~~~~~~--vwis~~~-d~~l~l--wd~~t~~~l~~idi  143 (151)
                      ||+.|+++.+++......    ......+.++++|  ++++-.. +..+.+  +|+.+   +++|++
T Consensus       101 iD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v  164 (368)
T 1mda_H          101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS  164 (368)
T ss_dssp             ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC
T ss_pred             EECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC
Confidence            999999999999875111    1235677788665  4554433 577999  99988   667754

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=97.69  E-value=0.0067  Score=46.97  Aligned_cols=119  Identities=9%  Similarity=0.040  Sum_probs=80.3

Q ss_pred             ceeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEE-eCCC-------CCceEEEeee-C-CEEEEEeC--
Q psy16020         17 TALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVT-LGLP-------HHSVRSLAAV-Y-NKVWCGYK--   80 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~-l~~~-------~~pV~~m~~v-~-~~Lw~g~~--   80 (151)
                      .+..|...  ++++|++-+  ++.|.+|+.  +|.    ....+. -+..       ....+.|++- + ++||++..  
T Consensus       144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~--~g~----~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~  217 (329)
T 3fvz_A          144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSP--SGK----FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN  217 (329)
T ss_dssp             SEEEEEECTTTCCEEEEECSSCCEEEEECT--TSC----EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred             CCcEEEEeCCCCeEEEEeCCCCCeEEEEcC--CCC----EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence            57778887  478999984  889999974  232    111111 1110       0225778875 3 78999873  


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc-------CCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR-------LDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~-------~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++|.+||+++++..+++.... ....+..+.+.+..++.+-+       .+..+++||..+++.+..+.
T Consensus       218 ~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~  285 (329)
T 3fvz_A          218 GRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFK  285 (329)
T ss_dssp             TEEEEEETTTCCEEEEECCTT-TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEEC
T ss_pred             CEEEEEECCCCcEEEEEeccc-cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEc
Confidence            589999999999999986543 23467788777733344433       34589999999999888873

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.67  E-value=0.0073  Score=44.88  Aligned_cols=118  Identities=10%  Similarity=0.179  Sum_probs=79.4

Q ss_pred             eeeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CC
Q psy16020         10 PLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KN   81 (151)
Q Consensus        10 ~~i~l~---~~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n   81 (151)
                      ..+.++   ..+.+|... ++++|++.. +|.|..|+..  |.+     ..+.+......+.+|++- +++||++.  ++
T Consensus        53 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~  125 (300)
T 2qc5_A           53 KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGF-----TEYPLPQPDSGPYGITEGLNGDIWFTQLNGD  125 (300)
T ss_dssp             EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-----EEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred             EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCe-----EEecCCCCCCCCccceECCCCCEEEEccCCC
Confidence            334454   467777764 467999986 5788888754  321     234443222556788775 57899988  46


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcccee
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      .|+.+|++ +++.. +... .....++.|...++ .+|++...++.|..||. +.+..
T Consensus       126 ~i~~~~~~-g~~~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~  179 (300)
T 2qc5_A          126 RIGKLTAD-GTIYE-YDLP-NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE  179 (300)
T ss_dssp             EEEEECTT-SCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred             eEEEECCC-CCEEE-ccCC-CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence            89999998 77653 3221 12357889988754 47999988999999998 45443

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=97.64  E-value=0.00097  Score=49.37  Aligned_cols=112  Identities=13%  Similarity=0.014  Sum_probs=75.6

Q ss_pred             ceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC-CEEEEEe--CCeEEEEeCCC
Q psy16020         17 TALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY-NKVWCGY--KNKIHVVDPKS   90 (151)
Q Consensus        17 ~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~-~~Lw~g~--~n~I~vid~~t   90 (151)
                      .+.+|... ++++|++.. +|.|.+|+.....        ..... .......+|++-. +.||++.  +++|++||+++
T Consensus       151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~  222 (270)
T 1rwi_B          151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN--------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS  222 (270)
T ss_dssp             SCCCEEECTTCCEEEEEGGGTEEEEECTTTCC--------EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred             CceeEEEeCCCCEEEEECCCCEEEEEecCCCc--------eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence            56677765 467999875 5789999764211        11111 1114456777754 5899998  46899999987


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceee
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      .........+   ...+..|+.+++ .+|++...++.|++|+....+++.
T Consensus       223 ~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~  269 (270)
T 1rwi_B          223 TTSTVLPFTG---LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHH  269 (270)
T ss_dssp             SCCEECCCCS---CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCC
T ss_pred             CcceeeccCC---CCCceeEEECCCCCEEEEECCCCEEEEEcCCCccccC
Confidence            6554321111   246889998854 479999999999999998766543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=97.63  E-value=0.00037  Score=59.38  Aligned_cols=116  Identities=15%  Similarity=0.129  Sum_probs=79.1

Q ss_pred             CceeeeEEeCC--eEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCC----------------------Cce
Q psy16020         16 DTALPPVHVQG--RVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPH----------------------HSV   65 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~----------------------~pV   65 (151)
                      .+|.++.+.++  +++.+.. +|     +|.+|+... |.    ....+......                      ..|
T Consensus        37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  111 (741)
T 2ecf_A           37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-GQ----TRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI  111 (741)
T ss_dssp             CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-CC----EEEEECGGGTC--------------------CCEES
T ss_pred             CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-Cc----eeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence            46778888643  5666665 77     788887642 21    11111111100                      237


Q ss_pred             EEEeee--CCEEEEEeCCeEEEEeCCCC---cEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeee
Q psy16020         66 RSLAAV--YNKVWCGYKNKIHVVDPKSL---VVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        66 ~~m~~v--~~~Lw~g~~n~I~vid~~t~---~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      .++.+.  ++.|..++.+.|++||..++   ++ +.+..|.   ..+..+.++++|-++....+..|++||..+.+..+.
T Consensus       112 ~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~-~~l~~~~---~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~  187 (741)
T 2ecf_A          112 VDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAV-RQLTHGE---GFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQL  187 (741)
T ss_dssp             CCCEECTTSSEEEEEETTEEEEEESSSCSTTSC-CBCCCSS---SCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEEC
T ss_pred             ceeEECCCCCEEEEEeCCcEEEEECCCCCcceE-EEcccCC---cccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEe
Confidence            777776  35688888899999999998   54 3455554   379999999998877777788999999998766543

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.62  E-value=0.0009  Score=54.15  Aligned_cols=71  Identities=13%  Similarity=0.045  Sum_probs=59.2

Q ss_pred             eCCEEEEEeC----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEc-CCCeEEEEeCCccce
Q psy16020         71 VYNKVWCGYK----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH  137 (151)
Q Consensus        71 v~~~Lw~g~~----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~-~d~~l~lwd~~t~~~  137 (151)
                      -++++|++..          +.+.|||+.|+++.+++....    ....|.++++|  +|++.. .++.|.++|+.|++.
T Consensus       274 dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv  349 (368)
T 1mda_H          274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred             CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence            3588998742          367799999999999998774    68888888654  799999 799999999999999


Q ss_pred             eeeEeCCc
Q psy16020        138 LQDVDIEP  145 (151)
Q Consensus       138 l~~idi~~  145 (151)
                      ++.|.+-.
T Consensus       350 v~~I~vg~  357 (368)
T 1mda_H          350 QSSVELDK  357 (368)
T ss_dssp             EEECCCCS
T ss_pred             EEEEECCC
Confidence            99997543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.61  E-value=0.0022  Score=54.60  Aligned_cols=134  Identities=13%  Similarity=0.038  Sum_probs=85.9

Q ss_pred             CCCceeeeeeCCCce-----eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCC-------ceEEEee
Q psy16020          4 PHPTPYPLNKILDTA-----LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHH-------SVRSLAA   70 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V-----~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~-------pV~~m~~   70 (151)
                      ...+.+|+.++++.+     ..-...++.||++..++.|..++...+. .|..      ++..+..       .-+.+++
T Consensus        42 ~~~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~------~~~~~~~~~~~~~~~~~g~a~  115 (582)
T 1flg_A           42 FKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTY------NHRLPDDIRPCCDVVNRGAAI  115 (582)
T ss_dssp             GGCEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEE------ECCCCTTCCCSSCSCCCCCEE
T ss_pred             CCCcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEE------cCCCCcccccccccCCCccEE
Confidence            456788999988532     2334578899999986668888875322 3533      3322110       0144556


Q ss_pred             eCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCC-CCcee-EEEEeCC------EEEEEEc-----CCCeEEEEeCCccc
Q psy16020         71 VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRR-ESQVR-QMTWAGD------GVWVSIR-----LDSTLRMYNAHTYQ  136 (151)
Q Consensus        71 v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~-~~~I~-~m~~~~~------~vwis~~-----~d~~l~lwd~~t~~  136 (151)
                      .+++|++++. ++|+.+|++|+++.=++...... ...+. .-...++      .|++..+     .++.|+.+|++|++
T Consensus       116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~  195 (582)
T 1flg_A          116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE  195 (582)
T ss_dssp             ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred             ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence            7899999984 69999999999998777654210 00111 1111233      4554332     47899999999999


Q ss_pred             eeeeEeC
Q psy16020        137 HLQDVDI  143 (151)
Q Consensus       137 ~l~~idi  143 (151)
                      .+-....
T Consensus       196 ~~W~~~~  202 (582)
T 1flg_A          196 EIWMRPF  202 (582)
T ss_dssp             EEEEEES
T ss_pred             EEeecCC
Confidence            9987654

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.60  E-value=0.0017  Score=56.13  Aligned_cols=110  Identities=14%  Similarity=0.137  Sum_probs=73.8

Q ss_pred             CC-CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCC-CCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCC
Q psy16020         14 IL-DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPK   89 (151)
Q Consensus        14 l~-~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd-~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~   89 (151)
                      |+ ..|.||.-. ++++|+|+.+| |..|+-.   .+. ...+.  .+  +...|+++..- ++.||+|..+-++.+|..
T Consensus        19 l~~n~V~~I~qD~~G~lWigT~~G-L~ryDG~---~~~~~~~~~--~~--~~~~i~~i~~d~~g~lWigT~~Gl~~yd~~   90 (758)
T 3ott_A           19 AEASVVSCFLQDSEGLIWIGSNKG-LFSYDGY---STQQHFTYG--EN--NNTRIYCGVIIDNTYLYMGTDNGILVYNYR   90 (758)
T ss_dssp             SSCCCEEEEEECTTSCEEEEESSC-EEEECSS---CEEECSCTT--ST--TSSCEEEEEEETTTEEEEEETTEEEEEETT
T ss_pred             cccceEEEEEECCCCCEEEEECCC-ccccCCC---ceEEEEccC--CC--CCceEEEEEEcCCCcEEEEeCCCeEEEeCC
Confidence            55 589999864 66899999887 6667521   110 00000  11  23679998775 588999999899999999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccc
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      +.+....   .......|.++......+|+...+  -|..||..+.+
T Consensus        91 ~~~f~~~---~~~~~~~i~~i~~~~g~lWigt~~--Gl~~~~~~~~~  132 (758)
T 3ott_A           91 ADRYEQP---ETDFPTDVRTMALQGDTLWLGALN--GLYTYQLQSRK  132 (758)
T ss_dssp             TTEECCC---SCCCCSCEEEEEEETTEEEEEETT--EEEEEETTTCC
T ss_pred             CCEEECc---ccCCCceEEEEEecCCcEEEEcCC--cceeEeCCCCe
Confidence            8765431   111223588887777789998765  57889987643

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.59  E-value=2.7e-05  Score=62.33  Aligned_cols=128  Identities=10%  Similarity=-0.062  Sum_probs=69.5

Q ss_pred             CCceeeeeeCC--Ccee-e-eEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          5 HPTPYPLNKIL--DTAL-P-PVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         5 ~~~~l~~i~l~--~~V~-~-i~~~~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      +.+.+|..+.+  +.+. + ....++.||+|..+|.|.+|+...+ ..|.++....         ++ +...++.|++|+
T Consensus        68 tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---------~~-~~p~~~~v~~~~  137 (369)
T 2hz6_A           68 NNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---------DS-LSPSTSLLYLGR  137 (369)
T ss_dssp             --CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------------EEEEE
T ss_pred             CCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---------cc-ccccCCEEEEEe
Confidence            45666666543  1111 1 1125678999999999999987533 2465543221         11 111567899888


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC----EEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~----~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      . +.|+.||++|++..-+++.+..     ......++    +..+.++.++.|+.||.++++.+.+.++..++
T Consensus       138 ~dg~v~a~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv  205 (369)
T 2hz6_A          138 TEYTITMYDTKTRELRWNATYFDY-----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPV  205 (369)
T ss_dssp             EEEEEECCCSSSSSCCCEEEEEEE-----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCE
T ss_pred             cCCEEEEEECCCCCEEEeEecccc-----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCce
Confidence            5 6899999999998766654321     11222231    33445678899999999999999988766544

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.57  E-value=0.017  Score=45.09  Aligned_cols=116  Identities=15%  Similarity=0.087  Sum_probs=81.2

Q ss_pred             CceeeeEEe-CCeEEEEec---CC--cEEEEEcCCCCCCCCCcceEEEeC-------CCCCceEEEeee-CCEEEEEe--
Q psy16020         16 DTALPPVHV-QGRVVCALA---DG--SVAIFRRGPDGQWDLSKYHTVTLG-------LPHHSVRSLAAV-YNKVWCGY--   79 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~---nG--~l~v~~~~~~~~wd~~~~~~i~l~-------~~~~pV~~m~~v-~~~Lw~g~--   79 (151)
                      ..+..+... ++++|++..   +|  +|..++   +|.       ..+..       ..-..+..|.+- +++||+..  
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~---~g~-------~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g   86 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT---QDG-------LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNG   86 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE---TTE-------EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEEC---CCC-------eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCC
Confidence            677888876 678999963   35  666665   221       11111       112567788876 48899875  


Q ss_pred             -----CCeEEEEeCCCCcEEEEEEecCC---CCCceeEEEEe--CCEEEEEEc---CCCeEEEEeCCccceeeeE
Q psy16020         80 -----KNKIHVVDPKSLVVLKSFDAHPR---RESQVRQMTWA--GDGVWVSIR---LDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        80 -----~n~I~vid~~t~~i~~~~~~h~~---~~~~I~~m~~~--~~~vwis~~---~d~~l~lwd~~t~~~l~~i  141 (151)
                           +++|++||++|+++.+++.....   ....++.++++  +..+|++-.   .++.|.+||..+.+....+
T Consensus        87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~  161 (343)
T 2qe8_A           87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL  161 (343)
T ss_dssp             HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred             CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence                 36999999999999998875421   12457899998  346788887   7899999999887765544

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=97.54  E-value=0.002  Score=47.60  Aligned_cols=111  Identities=14%  Similarity=0.013  Sum_probs=74.4

Q ss_pred             CceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCC
Q psy16020         16 DTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t   90 (151)
                      ..+..|... ++++|++. .+|.|.+|+....      . ............++|++. +++||++..  +.|++||.++
T Consensus       108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~------~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~  180 (270)
T 1rwi_B          108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK------T-QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  180 (270)
T ss_dssp             SSEEEEEECTTCCEEEEEGGGTEEEEECTTCC------S-CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             CCCcceEECCCCCEEEEECCCCEEEEEECCCc------e-eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence            467777775 56799985 4688999853211      1 111111111355677776 467999874  6899999988


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~  136 (151)
                      .........+   ...+..|+.+++ .+|++...++.|..||..+..
T Consensus       181 ~~~~~~~~~~---~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~  224 (270)
T 1rwi_B          181 NNQVVLPFTD---ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT  224 (270)
T ss_dssp             CCEEECCCSS---CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred             CceEeecccC---CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence            7754432222   247889999866 679999999999999987643

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.53  E-value=0.0097  Score=50.46  Aligned_cols=142  Identities=15%  Similarity=0.133  Sum_probs=88.5

Q ss_pred             CCCCceeeeeeCCC-----cee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcceEE-Ee----------
Q psy16020          3 YPHPTPYPLNKILD-----TAL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTV-TL----------   58 (151)
Q Consensus         3 ~~~~~~l~~i~l~~-----~V~-~i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~~i-~l----------   58 (151)
                      ..+.+.+|+.++++     .+. .....++.||++..      +|.|.+|+...+. .|.++..... ..          
T Consensus       132 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~  211 (571)
T 2ad6_A          132 AKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSAN  211 (571)
T ss_dssp             TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred             CCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccc
Confidence            35778899998875     333 22345789999987      7999999975432 3533211000 00          


Q ss_pred             --------------------CCCCCceEEEee--eCCEEEEEeCC-----------------eEEEEeCCCCcEEEEEEe
Q psy16020         59 --------------------GLPHHSVRSLAA--VYNKVWCGYKN-----------------KIHVVDPKSLVVLKSFDA   99 (151)
Q Consensus        59 --------------------~~~~~pV~~m~~--v~~~Lw~g~~n-----------------~I~vid~~t~~i~~~~~~   99 (151)
                                          +. ..+-..+++  ..+.||++.+|                 .|+.+|++|+++.-+++.
T Consensus       212 ~~~G~~~~g~~~w~~~~~~~gg-~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~  290 (571)
T 2ad6_A          212 PHYGQFGLGTKTWEGDAWKIGG-GTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK  290 (571)
T ss_dssp             GGGCCSSHHHHTSSTTGGGGCC-CCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred             ccccccccccccCcccceecCC-CCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC
Confidence                                00 000012333  24789998853                 599999999999888875


Q ss_pred             cC-C-----C-CCcee-EEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        100 HP-R-----R-ESQVR-QMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       100 h~-~-----~-~~~I~-~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .. +     . ..++. .....|.  .+++...+++.+.++|.+|++.+..+.+.+
T Consensus       291 ~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~  346 (571)
T 2ad6_A          291 TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDP  346 (571)
T ss_dssp             STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred             CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccC
Confidence            32 1     0 12221 1111222  357788999999999999999999887654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.53  E-value=0.00038  Score=60.64  Aligned_cols=111  Identities=15%  Similarity=0.200  Sum_probs=73.7

Q ss_pred             CC-CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe--C----CCCCceEEEeee-CCEEEEEeCCeEE
Q psy16020         14 IL-DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--G----LPHHSVRSLAAV-YNKVWCGYKNKIH   84 (151)
Q Consensus        14 l~-~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l--~----~~~~pV~~m~~v-~~~Lw~g~~n~I~   84 (151)
                      |+ ..|.+|.-. ++++|+|+.+| |..|+-.   .|     +.++.  .    -+...|++|..- ++.||+|+.+-++
T Consensus        40 Ls~n~v~~I~qD~~G~lWigT~~G-L~ryDG~---~f-----~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~~Gl~  110 (795)
T 4a2l_A           40 LSQSTVFSIDQDKRGNMWFATYDG-VNKYDGY---AF-----TVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLS  110 (795)
T ss_dssp             CSSSCEEEEEECTTSCEEEEETTE-EEEECSS---CE-----EEECCCTTCTTSCSCSCEEEEEECTTSCEEEEESSCEE
T ss_pred             CccceeEEEEEcCCCCEEEeecCc-CcccCCC---ce-----EEEeCCCCCCCcccccceeEEEECCCCCEEEEeCCchh
Confidence            55 489999874 66899999877 6777522   11     22221  0    123679998875 4789999998899


Q ss_pred             EEeCCCCcEEEEEEecCCC-CCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020         85 VVDPKSLVVLKSFDAHPRR-ESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~-~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~  136 (151)
                      .+|.++.+... +...... ...|.++....+ .+|++..  .-|..||..+.+
T Consensus       111 ~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~  161 (795)
T 4a2l_A          111 RYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP--EGLIMFDIKESK  161 (795)
T ss_dssp             EEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET--TEEEEEETTTTE
T ss_pred             eeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC--CceEEEECCCCE
Confidence            99999877543 3322111 112888877744 5798876  458899987643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=97.52  E-value=0.00095  Score=51.28  Aligned_cols=127  Identities=10%  Similarity=0.074  Sum_probs=81.4

Q ss_pred             CCceeeeeeCCC--ceeeeEEe-CCeEEEE-ec-CCcEEEEEcCCCCCCCCCcceEEEeCC----CCCceEEEeee--CC
Q psy16020          5 HPTPYPLNKILD--TALPPVHV-QGRVVCA-LA-DGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAV--YN   73 (151)
Q Consensus         5 ~~~~l~~i~l~~--~V~~i~~~-~~~v~vg-l~-nG~l~v~~~~~~~~wd~~~~~~i~l~~----~~~pV~~m~~v--~~   73 (151)
                      ..+.+|+++.+.  .+.+.... +++++++ .. ++.+..|+.  +|.    ....+.+..    +..+.+.+...  ++
T Consensus        64 ~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~--~Gk----~l~~~~~~~~~~~~~~~~~~v~~~~~G~  137 (276)
T 3no2_A           64 DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM--KGE----VLSKTEFETGIERPHAQFRQINKNKKGN  137 (276)
T ss_dssp             TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT--TSC----EEEEEEECCSCSSGGGSCSCCEECTTSC
T ss_pred             CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC--CCC----EEEEEeccCCCCcccccccCceECCCCC
Confidence            578899999873  55555543 3455555 44 567776654  342    222334321    11233333333  34


Q ss_pred             EEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         74 KVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        74 ~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .|++..+ ++|++||++ ++.+.++....    .+....... ..++++...++.|..+|..|++.+.++.
T Consensus       138 ~lv~~~~~~~v~~~d~~-G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~  203 (276)
T 3no2_A          138 YLVPLFATSEVREIAPN-GQLLNSVKLSG----TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN  203 (276)
T ss_dssp             EEEEETTTTEEEEECTT-SCEEEEEECSS----CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred             EEEEecCCCEEEEECCC-CCEEEEEECCC----CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence            4555554 689999998 99999998653    334444454 4568888888899999999999999985

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.48  E-value=0.011  Score=50.61  Aligned_cols=143  Identities=11%  Similarity=0.046  Sum_probs=90.3

Q ss_pred             CCCCceeeeeeCCC-----ceee-eEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCcceEE-E--eCC---CCC
Q psy16020          3 YPHPTPYPLNKILD-----TALP-PVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTV-T--LGL---PHH   63 (151)
Q Consensus         3 ~~~~~~l~~i~l~~-----~V~~-i~~~~~~v~vgl~------nG~l~v~~~~~~~-~wd~~~~~~i-~--l~~---~~~   63 (151)
                      ..+.+.+|+.++++     .+.+ -...++.||++.+      +|.|..|+...+. .|.++..... .  ++.   ...
T Consensus       138 a~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~  217 (599)
T 1w6s_A          138 AETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN  217 (599)
T ss_dssp             TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred             CCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence            35778899998875     3332 2346789999985      7999999976432 3533211000 0  000   000


Q ss_pred             ce------------------------EEEee--eCCEEEEEeCC-----------------eEEEEeCCCCcEEEEEEec
Q psy16020         64 SV------------------------RSLAA--VYNKVWCGYKN-----------------KIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        64 pV------------------------~~m~~--v~~~Lw~g~~n-----------------~I~vid~~t~~i~~~~~~h  100 (151)
                      |+                        ..+++  ..+.||++.+|                 .|+.+|++|+++.=.++..
T Consensus       218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~  297 (599)
T 1w6s_A          218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT  297 (599)
T ss_dssp             GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred             ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence            11                        12333  35889999875                 7999999999998888754


Q ss_pred             CCC------CCceeEEEE---eCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        101 PRR------ESQVRQMTW---AGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       101 ~~~------~~~I~~m~~---~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ...      ..+......   .|.  .+.+...+++.+.++|.+|++++....+.+
T Consensus       298 ~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~  353 (599)
T 1w6s_A          298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDD  353 (599)
T ss_dssp             TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred             CCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccC
Confidence            311      111111221   132  467789999999999999999999887654

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=97.46  E-value=0.0025  Score=48.83  Aligned_cols=109  Identities=17%  Similarity=0.111  Sum_probs=74.6

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCC
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRE  104 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~  104 (151)
                      +.++++..||.|.+|+... |    +....++.+.. ..++++.+. +++++++.++.|+.||+ +++++.++..+..  
T Consensus         6 ~~lv~~~~~~~v~~~d~~t-G----~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~--   76 (276)
T 3no2_A            6 HLLVGGSGWNKIAIINKDT-K----EIVWEYPLEKG-WECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAG--   76 (276)
T ss_dssp             EEEEECTTCSEEEEEETTT-T----EEEEEEECCTT-CCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTT--
T ss_pred             cEEEeeCCCCEEEEEECCC-C----eEEEEeCCCcc-CCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC--
Confidence            4577777899999998742 3    12223333321 245666664 57788866789999999 8999999997532  


Q ss_pred             CceeEEEEeCCE-EEEEEcC-CCeEEEEeCCccceeeeEeCC
Q psy16020        105 SQVRQMTWAGDG-VWVSIRL-DSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       105 ~~I~~m~~~~~~-vwis~~~-d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ..+.......+| ++++.+. ...+..+|. +++.+.++.+.
T Consensus        77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~  117 (276)
T 3no2_A           77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE  117 (276)
T ss_dssp             CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC
T ss_pred             ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc
Confidence            356666666554 4666666 778888886 68888888754

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=97.45  E-value=0.013  Score=45.76  Aligned_cols=100  Identities=15%  Similarity=0.091  Sum_probs=65.0

Q ss_pred             cCCcEEEEEcCCCCCCCCCcceEEEeC--CCCCceEEEeeeC--CEEEEEe--CCeEEEEeCC-CCcEEE--EEEecCCC
Q psy16020         33 ADGSVAIFRRGPDGQWDLSKYHTVTLG--LPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPK-SLVVLK--SFDAHPRR  103 (151)
Q Consensus        33 ~nG~l~v~~~~~~~~wd~~~~~~i~l~--~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~-t~~i~~--~~~~h~~~  103 (151)
                      .+|++.+|+...+|.    ....+...  .....+.++.+..  +.|+++.  .++|++||.+ +++...  .+.... .
T Consensus       117 ~~g~v~v~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~  191 (365)
T 1jof_A          117 FAGYGNVFSVSETGK----LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD-P  191 (365)
T ss_dssp             SCCEEEEEEECTTCC----EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS-T
T ss_pred             CCceEEEEccCCCCc----CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC-C
Confidence            578999999875553    11223321  1125678888863  4688876  3689999998 787643  333111 1


Q ss_pred             CCceeEEEEeCCE--EEEEEcCCCeEEEEeCC--ccce
Q psy16020        104 ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH--TYQH  137 (151)
Q Consensus       104 ~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~--t~~~  137 (151)
                      ...+.+++++++|  ++++...++.+.+|+..  +++.
T Consensus       192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~  229 (365)
T 1jof_A          192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP  229 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence            2468999999776  56666778999998754  5554

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.45  E-value=0.0028  Score=54.36  Aligned_cols=142  Identities=11%  Similarity=0.020  Sum_probs=88.3

Q ss_pred             CCceeeeeeCCCc---eeeeEEeCCeEEEEec-CCcEEEEEc-CCCC-CCCCCcceEEEeC---CCCCceEEEee--eCC
Q psy16020          5 HPTPYPLNKILDT---ALPPVHVQGRVVCALA-DGSVAIFRR-GPDG-QWDLSKYHTVTLG---LPHHSVRSLAA--VYN   73 (151)
Q Consensus         5 ~~~~l~~i~l~~~---V~~i~~~~~~v~vgl~-nG~l~v~~~-~~~~-~wd~~~~~~i~l~---~~~~pV~~m~~--v~~   73 (151)
                      ..+..|+.++++.   -..-...++.||++.. +|.|..++. ..+. .|..+........   .+....+.+++  .++
T Consensus        39 ~l~~~W~~~~g~~~g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g  118 (599)
T 1w6s_A           39 QLRPAWTFSTGLLNGHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDG  118 (599)
T ss_dssp             GEEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCS
T ss_pred             CCcEEEEEECCCCCCceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCC
Confidence            4567888888631   1333456889999999 899999997 4322 3644321110000   00011233455  566


Q ss_pred             E----EEEEeC-CeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeE
Q psy16020         74 K----VWCGYK-NKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        74 ~----Lw~g~~-n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~i  141 (151)
                      +    |++++. ++++.+|++|+++.=++..... ....+. .-.+.++.|++..+     .++.|+.+|++|++.+-.+
T Consensus       119 ~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~  198 (599)
T 1w6s_A          119 KTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA  198 (599)
T ss_dssp             SSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred             cceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence            6    999985 6999999999998876654320 000111 11223566665544     4899999999999999999


Q ss_pred             eCCcc
Q psy16020        142 DIEPY  146 (151)
Q Consensus       142 di~~~  146 (151)
                      +..+.
T Consensus       199 ~~~~~  203 (599)
T 1w6s_A          199 YATGP  203 (599)
T ss_dssp             ESSSC
T ss_pred             cCCCC
Confidence            87654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.45  E-value=0.0013  Score=54.98  Aligned_cols=136  Identities=10%  Similarity=0.131  Sum_probs=81.4

Q ss_pred             CceeeeeeCCCceeeeEE--------------e----CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEE-------eC
Q psy16020          6 PTPYPLNKILDTALPPVH--------------V----QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVT-------LG   59 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~--------------~----~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~-------l~   59 (151)
                      .+.++.+.+|..-..+.|              .    .+++|+ |+.++.|.||+...+.. ..+..+.++       .|
T Consensus        58 ~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~-~p~~~k~ie~~~~~~~~g  136 (462)
T 2ece_A           58 SKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPR-EPKIIKVIEPEEVKKVSG  136 (462)
T ss_dssp             TSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTT-SCEEEEEECHHHHHHHHC
T ss_pred             ceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCC-CceeeeeechhhcccccC
Confidence            467788888764433332              2    456777 66667899999764332 112223331       12


Q ss_pred             CCCCceEEEeeeCCEEEEEe-C-------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEE---------
Q psy16020         60 LPHHSVRSLAAVYNKVWCGY-K-------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSI---------  121 (151)
Q Consensus        60 ~~~~pV~~m~~v~~~Lw~g~-~-------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~---------  121 (151)
                      . ..|=+-...-++ +++++ |       +.|.++|++|++++.+++.-......-..+-+.++ .+.++.         
T Consensus       137 ~-s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~  214 (462)
T 2ece_A          137 Y-SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE  214 (462)
T ss_dssp             E-EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred             C-CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence            1 133222222344 88766 2       47999999999999999854322112222333422 233333         


Q ss_pred             ----------cCCCeEEEEeCCccceeeeEeCC
Q psy16020        122 ----------RLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       122 ----------~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                                ..+..|.+||..+.+.+++|++.
T Consensus       215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg  247 (462)
T 2ece_A          215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG  247 (462)
T ss_dssp             TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred             cccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence                      34899999999999999999985

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=97.44  E-value=0.0036  Score=45.91  Aligned_cols=118  Identities=9%  Similarity=-0.036  Sum_probs=72.6

Q ss_pred             eeeCCCceeeeEEeCC--eEE-EEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CC--
Q psy16020         11 LNKILDTALPPVHVQG--RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KN--   81 (151)
Q Consensus        11 ~i~l~~~V~~i~~~~~--~v~-vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n--   81 (151)
                      .+.....+.++.+.++  +++ ++..+|.+.+|..+..      ......+.....+++++.+..  +.|++++  ++  
T Consensus       124 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~  197 (297)
T 2ojh_A          124 LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID------SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM  197 (297)
T ss_dssp             ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT------TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred             EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECC------CCcceEcccCCCccccceECCCCCEEEEEecCCCCc
Confidence            3333445777777643  344 7778899888886422      122334544447889998863  4577665  33  


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCC-----------CeEEEEeCCcccee
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLD-----------STLRMYNAHTYQHL  138 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d-----------~~l~lwd~~t~~~l  138 (151)
                      +|+.++..+.+ .+.+..|.   ..+..+.+++++- +++.+.+           ..|++||..+.+..
T Consensus       198 ~i~~~~~~~~~-~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~  262 (297)
T 2ojh_A          198 QIWRVRVDGSS-VERITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE  262 (297)
T ss_dssp             EEEEEETTSSC-EEECCCCS---EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred             cEEEECCCCCC-cEEEecCC---cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence            45556555544 45566554   4788889887653 2233332           67999999987653

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.42  E-value=0.0017  Score=56.45  Aligned_cols=113  Identities=17%  Similarity=0.304  Sum_probs=76.9

Q ss_pred             CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEe-CCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCc
Q psy16020         16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLV   92 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l-~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~   92 (151)
                      ..|.+|... ++.+|+|..+|-|..|+... +.+     ..+.. +.+...|+++..- +++||+|..+-|+.+|+++++
T Consensus       407 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~~-----~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~  480 (781)
T 3v9f_A          407 NSVLCSLKDSEGNLWFGTYLGNISYYNTRL-KKF-----QIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKK  480 (781)
T ss_dssp             SBEEEEEECTTSCEEEEETTEEEEEECSSS-CEE-----EECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSS
T ss_pred             cceEEEEECCCCCEEEEeccCCEEEEcCCC-CcE-----EEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCe
Confidence            578898875 67899999777788886532 111     11111 1123789998876 589999999889999999887


Q ss_pred             EEEEEEec--CCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcc
Q psy16020         93 VLKSFDAH--PRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        93 i~~~~~~h--~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~  135 (151)
                      ...-....  ......|.+|..+.+ .+|++....+ |..||..+.
T Consensus       481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~  525 (781)
T 3v9f_A          481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ  525 (781)
T ss_dssp             CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred             EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence            65433222  011347899988755 4698887666 566887754

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=97.39  E-value=0.004  Score=47.54  Aligned_cols=101  Identities=16%  Similarity=0.178  Sum_probs=68.6

Q ss_pred             eeeEEe--CCeEEEEec-CCcEEEEEcC-CCCCCCCCcceEE-EeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCC
Q psy16020         19 LPPVHV--QGRVVCALA-DGSVAIFRRG-PDGQWDLSKYHTV-TLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS   90 (151)
Q Consensus        19 ~~i~~~--~~~v~vgl~-nG~l~v~~~~-~~~~wd~~~~~~i-~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t   90 (151)
                      ..|.+.  ++.+|++-. ++.|.+|+.+ ++|.  +...+.+ .+.........|++- +++||++.  +++|++||++|
T Consensus       152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~--~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t  229 (297)
T 3g4e_A          152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ--ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT  229 (297)
T ss_dssp             EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC--EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred             cceEEcCCCCEEEEecCCCCcEEEEeccCCCCc--ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence            345554  335777654 6889999875 4453  2222222 333212345777774 57899998  46899999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeC---CEEEEEEcCC
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAG---DGVWVSIRLD  124 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~---~~vwis~~~d  124 (151)
                      +++...+..+.   ..++++++.|   ..+|++..++
T Consensus       230 G~~~~~i~~p~---~~~t~~~f~g~d~~~L~vt~~~~  263 (297)
T 3g4e_A          230 GKRLQTVKLPV---DKTTSCCFGGKNYSEMYVTCARD  263 (297)
T ss_dssp             CCEEEEEECSS---SBEEEEEEESGGGCEEEEEEBCT
T ss_pred             ceEEEEEECCC---CCceEEEEeCCCCCEEEEEcCCc
Confidence            99999998774   3799999984   3679888765

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.34  E-value=0.0095  Score=51.60  Aligned_cols=136  Identities=11%  Similarity=0.033  Sum_probs=86.1

Q ss_pred             CCCCceeeeeeCCCce------------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeC-CCC--CceE
Q psy16020          3 YPHPTPYPLNKILDTA------------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG-LPH--HSVR   66 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V------------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~-~~~--~pV~   66 (151)
                      ..+.+.+|+.+++...            -...+.+++||++..||.|..++...+. .|..      +.. +..  ..+.
T Consensus        87 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~------~~~~~~~~~~~~~  160 (689)
T 1yiq_A           87 ARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSV------DTRADHKRSYTIT  160 (689)
T ss_dssp             TTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE------ECCSCTTSCCBCC
T ss_pred             CCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeee------cCcCCCCCCcccc
Confidence            3577889998876431            1246678999999999999999975332 3543      222 110  1121


Q ss_pred             -EEeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEEecC-CCC---------------------------CceeEE
Q psy16020         67 -SLAAVYNKVWCGYK-------NKIHVVDPKSLVVLKSFDAHP-RRE---------------------------SQVRQM  110 (151)
Q Consensus        67 -~m~~v~~~Lw~g~~-------n~I~vid~~t~~i~~~~~~h~-~~~---------------------------~~I~~m  110 (151)
                       +-.+.++.|+++++       +.|+.+|++|++..=++..-+ +..                           ..-..+
T Consensus       161 ~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~  240 (689)
T 1yiq_A          161 GAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSF  240 (689)
T ss_dssp             SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCE
T ss_pred             CCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccce
Confidence             11346899999873       589999999999887776311 100                           001245


Q ss_pred             EEeC-CEEEEEEcCCC-------------------eEEEEeCCccceeeeEeCC
Q psy16020        111 TWAG-DGVWVSIRLDS-------------------TLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       111 ~~~~-~~vwis~~~d~-------------------~l~lwd~~t~~~l~~idi~  144 (151)
                      .+++ .+..+....++                   .|..+|+.|++.+..+...
T Consensus       241 ~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~  294 (689)
T 1yiq_A          241 AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTT  294 (689)
T ss_dssp             EEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESS
T ss_pred             eEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecC
Confidence            5553 23333343333                   5999999999999888754

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=97.29  E-value=0.00079  Score=57.12  Aligned_cols=115  Identities=10%  Similarity=-0.010  Sum_probs=73.6

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC--------------CCCceEEEeeeC-CEEEEEeCC
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--------------PHHSVRSLAAVY-NKVWCGYKN   81 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~--------------~~~pV~~m~~v~-~~Lw~g~~n   81 (151)
                      .+..+...+++++.+..+| | +|+...+...   ....+....              ...+|+++.+.. +.+.+++++
T Consensus        27 ~~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~~  101 (706)
T 2z3z_A           27 YVVGLQWMGDNYVFIEGDD-L-VFNKANGKSA---QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQG  101 (706)
T ss_dssp             -CTTCEEETTEEEEEETTE-E-EEEC----------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEETT
T ss_pred             cCCCCcCcCCeEEEEeCCc-E-EEECCCCcEe---eEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEECC
Confidence            3444455566666666677 7 8886432110   011111110              015799999874 567777889


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCc-----cceeee
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-----YQHLQD  140 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t-----~~~l~~  140 (151)
                      .|++||..+++..+... +.   ..+..+.++++|-++....++.|++||..+     .+..+.
T Consensus       102 ~i~~~d~~~~~~~~l~~-~~---~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~  161 (706)
T 2z3z_A          102 GLVGFDMLARKVTYLFD-TN---EETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAV  161 (706)
T ss_dssp             EEEEEETTTTEEEEEEC-CT---TCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEES
T ss_pred             EEEEEECCCCceEEccC-Cc---ccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEe
Confidence            99999999988755443 43   367788899888766667899999999998     766543

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.26  E-value=0.013  Score=50.61  Aligned_cols=136  Identities=13%  Similarity=0.056  Sum_probs=87.2

Q ss_pred             CCCCceeeeeeCCCce------------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCC--CceE-
Q psy16020          3 YPHPTPYPLNKILDTA------------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSVR-   66 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V------------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~--~pV~-   66 (151)
                      ..+.+.+|+.+++...            -.+.+.+++||++..||.|..++...+. .|..      +++++.  ..+. 
T Consensus        83 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~------~~~~~~~~~~~~~  156 (668)
T 1kv9_A           83 AASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQ------QTTDPAKPYSITG  156 (668)
T ss_dssp             TTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEE------ECSCTTSSCBCCS
T ss_pred             CCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeee------ccCCCCCcceecC
Confidence            3577889998876432            1245678899999999999999975332 3533      332210  1111 


Q ss_pred             EEeeeCCEEEEEeC-------CeEEEEeCCCCcEEEEEEecC-CCC---------------------------CceeEEE
Q psy16020         67 SLAAVYNKVWCGYK-------NKIHVVDPKSLVVLKSFDAHP-RRE---------------------------SQVRQMT  111 (151)
Q Consensus        67 ~m~~v~~~Lw~g~~-------n~I~vid~~t~~i~~~~~~h~-~~~---------------------------~~I~~m~  111 (151)
                      .-.+.++.|+++++       +.|+.+|++|++..-++.... +..                           .....+.
T Consensus       157 ~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a  236 (668)
T 1kv9_A          157 APRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMA  236 (668)
T ss_dssp             CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEE
T ss_pred             CCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceE
Confidence            12345899999874       589999999999988887421 100                           0112345


Q ss_pred             EeC--CEEEEEEcCC------------------CeEEEEeCCccceeeeEeCC
Q psy16020        112 WAG--DGVWVSIRLD------------------STLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       112 ~~~--~~vwis~~~d------------------~~l~lwd~~t~~~l~~idi~  144 (151)
                      +++  +-|++...+.                  +.|..+|..|++.+-.++..
T Consensus       237 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~  289 (668)
T 1kv9_A          237 YDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVT  289 (668)
T ss_dssp             EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS
T ss_pred             EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecC
Confidence            542  3445444332                  25999999999999888764

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.26  E-value=0.033  Score=41.51  Aligned_cols=117  Identities=7%  Similarity=-0.011  Sum_probs=81.4

Q ss_pred             ceeeeEEe--CCeEEEEecC---CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEe
Q psy16020         17 TALPPVHV--QGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVD   87 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~n---G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid   87 (151)
                      ....|...  ++++|++-..   +.|.+++.+  |.    ....+.-... .--+.|++-  +++||++..  ++|+++|
T Consensus       123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~----~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~~~I~~~~  195 (267)
T 1npe_A          123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--GT----NRRILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLN  195 (267)
T ss_dssp             SEEEEEEETTTTEEEEEECCSSSCEEEEEETT--SC----CCEEEECTTC-SCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CccEEEEeeCCCEEEEEECCCCCcEEEEEecC--CC----CcEEEEECCC-CCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence            45677765  4789998753   678888753  32    2222221111 223566665  478998884  6899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .++......+..    ......|+..++.+|++...++.|..+|..+++.++.|...
T Consensus       196 ~~g~~~~~~~~~----~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g  248 (267)
T 1npe_A          196 PAQPGRRKVLEG----LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH  248 (267)
T ss_dssp             TTEEEEEEEEEC----CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred             cCCCceEEEecC----CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence            987655444442    23456788888899999999999999999999999999653

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.26  E-value=0.0024  Score=55.53  Aligned_cols=114  Identities=11%  Similarity=0.198  Sum_probs=77.5

Q ss_pred             CceeeeEEe-CCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeC---CCCCceEEEeee-CCEEEEEeCCeEEEEeCC
Q psy16020         16 DTALPPVHV-QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLG---LPHHSVRSLAAV-YNKVWCGYKNKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~-~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~---~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~   89 (151)
                      ..|.+|... +++ +|+|+.+|-|..|+...+..      ..+...   -+...|++|..- +++||+|..+-++.+|++
T Consensus       406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~------~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~  479 (795)
T 4a2l_A          406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV------ENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPE  479 (795)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE------EEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETT
T ss_pred             ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE------EEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCC
Confidence            578898874 567 99999878899998653211      122111   112678898875 588999998889999999


Q ss_pred             CCcEEEEEEe---cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccce
Q psy16020         90 SLVVLKSFDA---HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        90 t~~i~~~~~~---h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~  137 (151)
                      +++...-...   .......|.++..+.+| +|++.. . -|..||..+.+.
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~  529 (795)
T 4a2l_A          480 QRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI  529 (795)
T ss_dssp             TTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE
T ss_pred             CCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE
Confidence            9876543221   01122478999887555 699887 3 477888876544

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=97.26  E-value=0.0012  Score=55.98  Aligned_cols=115  Identities=11%  Similarity=0.059  Sum_probs=74.4

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCCeEEEEeCCC---
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKS---   90 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~t---   90 (151)
                      ..|.++.++++..++...+|+|.+|+...        .+...+.....++.++.+.  ++.|..+.+++|++||..+   
T Consensus        82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~--------~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~  153 (706)
T 2z3z_A           82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLA--------RKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGE  153 (706)
T ss_dssp             CCCEEEEETTTTEEEEEETTEEEEEETTT--------TEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTS
T ss_pred             cCceeEEECCCCeEEEEECCEEEEEECCC--------CceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccc
Confidence            46888888765444444689999998742        1222332223667777776  3578777889999999999   


Q ss_pred             --CcEEEEEEecCCC-----------CCceeEEEEeCCEEEE-EEc---------------------------------C
Q psy16020         91 --LVVLKSFDAHPRR-----------ESQVRQMTWAGDGVWV-SIR---------------------------------L  123 (151)
Q Consensus        91 --~~i~~~~~~h~~~-----------~~~I~~m~~~~~~vwi-s~~---------------------------------~  123 (151)
                        ++..+....+...           ...+..+.++++|-++ +.+                                 .
T Consensus       154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~  233 (706)
T 2z3z_A          154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH  233 (706)
T ss_dssp             CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred             cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence              8876544433220           0125788898776533 333                                 4


Q ss_pred             CCeEEEEeCCcccee
Q psy16020        124 DSTLRMYNAHTYQHL  138 (151)
Q Consensus       124 d~~l~lwd~~t~~~l  138 (151)
                      +..|++||..+.+..
T Consensus       234 ~~~l~~~d~~~~~~~  248 (706)
T 2z3z_A          234 HVTVGIYHLATGKTV  248 (706)
T ss_dssp             EEEEEEEETTTTEEE
T ss_pred             eeEEEEEECCCCceE
Confidence            578999999987654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.26  E-value=0.0032  Score=54.63  Aligned_cols=114  Identities=11%  Similarity=0.093  Sum_probs=76.4

Q ss_pred             CceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCC-CCcceEEEeCCCCCceEEEeee-CCEEEEEeC-CeEEEEeCCCC
Q psy16020         16 DTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSL   91 (151)
Q Consensus        16 ~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd-~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid~~t~   91 (151)
                      ..|.+|...+ +.+|+|..+|-|..|+... +.+. +..+  -.+.  ...|.+|..- ++.||+|.. +-++.+|.+++
T Consensus       363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~~~~~~~~--~~~~--~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~  437 (781)
T 3v9f_A          363 KVVSSVCDDGQGKLWIGTDGGGINVFENGK-RVAIYNKEN--RELL--SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK  437 (781)
T ss_dssp             SCEEEEEECTTSCEEEEEBSSCEEEEETTE-EEEECC-------CC--CSBEEEEEECTTSCEEEEETTEEEEEECSSSC
T ss_pred             cceEEEEEcCCCCEEEEeCCCcEEEEECCC-CeEEEccCC--CCCC--CcceEEEEECCCCCEEEEeccCCEEEEcCCCC
Confidence            5688888754 7899999777788888642 1110 0000  0222  3789999875 688999995 68999999988


Q ss_pred             cEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccce
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~  137 (151)
                      +..+-... ......|.++....+ .+|++..  .-|..||..+.+.
T Consensus       438 ~~~~~~~~-~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~  481 (781)
T 3v9f_A          438 KFQIIELE-KNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKV  481 (781)
T ss_dssp             EEEECCST-TTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSC
T ss_pred             cEEEeccC-CCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeE
Confidence            76432211 112357999988854 5698876  4588899876443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=97.24  E-value=0.012  Score=44.96  Aligned_cols=112  Identities=6%  Similarity=0.038  Sum_probs=73.5

Q ss_pred             ceeeeEEe-CCeEEE-EecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC------CeEEEEe
Q psy16020         17 TALPPVHV-QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------NKIHVVD   87 (151)
Q Consensus        17 ~V~~i~~~-~~~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~------n~I~vid   87 (151)
                      .+.++.+. ++++|+ +..+|.|.+|+... +     ....+... +...+.+|++. +++||++..      +.|++||
T Consensus        46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~-----~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d  118 (333)
T 2dg1_A           46 QLEGLNFDRQGQLFLLDVFEGNIFKINPET-K-----EIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT  118 (333)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTT-C-----CEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred             cccCcEECCCCCEEEEECCCCEEEEEeCCC-C-----cEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence            45566664 456775 56788899987642 2     11222222 22678899886 568998873      3899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcC------CCeEEEEeCCccc
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRL------DSTLRMYNAHTYQ  136 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~------d~~l~lwd~~t~~  136 (151)
                      +++++..+.+... .....++.+..+++| +|++...      .+.|..||..+.+
T Consensus       119 ~~~~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~  173 (333)
T 2dg1_A          119 ENGDNLQDIIEDL-STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT  173 (333)
T ss_dssp             TTSCSCEEEECSS-SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred             CCCCEEEEEEccC-ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence            9998876554422 123478999998664 6888765      3678888876543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=97.17  E-value=0.036  Score=41.57  Aligned_cols=106  Identities=10%  Similarity=0.070  Sum_probs=72.3

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE--Ee--CCCCCceEEEeee-CCEEEEEeC--------
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV--TL--GLPHHSVRSLAAV-YNKVWCGYK--------   80 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i--~l--~~~~~pV~~m~~v-~~~Lw~g~~--------   80 (151)
                      ..+.+|...+  +++|++..++.|.+|+..  |..     ..+  ..  +.+...++++++- ++++|++..        
T Consensus        71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~--g~~-----~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~  143 (314)
T 1pjx_A           71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD--GTF-----EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD  143 (314)
T ss_dssp             CCEEEEEECSSSSEEEEEETTTEEEEEETT--SCE-----EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred             CCCceEEEecCCCcEEEEECCCCEEEEeCC--CCE-----EEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence            5677787754  689999877778888764  321     111  11  1111346788775 578999874        


Q ss_pred             ---------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe----CCE--EEEEEcCCCeEEEEeCC
Q psy16020         81 ---------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA----GDG--VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        81 ---------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~----~~~--vwis~~~d~~l~lwd~~  133 (151)
                               +.|+.+|++ ++........    ...+.++++    +++  +|++...++.|.+||..
T Consensus       144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~  206 (314)
T 1pjx_A          144 YTRSMQEKFGSIYCFTTD-GQMIQVDTAF----QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK  206 (314)
T ss_dssp             CCBTTSSSCEEEEEECTT-SCEEEEEEEE----SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred             ccccccCCCCeEEEECCC-CCEEEeccCC----CCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence                     479999987 7765544422    256778888    765  68888889999999976

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=97.15  E-value=0.042  Score=42.50  Aligned_cols=112  Identities=14%  Similarity=0.092  Sum_probs=72.6

Q ss_pred             eeeeeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEE-EeCC--CCCceEEEeee-CCEEEEEeC---
Q psy16020          9 YPLNKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGL--PHHSVRSLAAV-YNKVWCGYK---   80 (151)
Q Consensus         9 l~~i~l~~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l~~--~~~pV~~m~~v-~~~Lw~g~~---   80 (151)
                      ...+.++..|.+|... ++++|++..+| |.+|+... |.     ...+ ....  +...++.+.+- ++++|++..   
T Consensus        83 ~~~~~~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~-g~-----~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~  155 (326)
T 2ghs_A           83 KTVHALPFMGSALAKISDSKQLIASDDG-LFLRDTAT-GV-----LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK  155 (326)
T ss_dssp             EEEEECSSCEEEEEEEETTEEEEEETTE-EEEEETTT-CC-----EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT
T ss_pred             EEEEECCCcceEEEEeCCCeEEEEECCC-EEEEECCC-Cc-----EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc
Confidence            3445667788888764 67899998655 88887532 21     1122 1111  11346677665 467999873   


Q ss_pred             -----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC
Q psy16020         81 -----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        81 -----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~  133 (151)
                           +.|+.+|  ++++..... +.   ...+.++++++  .+|++...++.|.+||..
T Consensus       156 ~~~~~~~l~~~~--~g~~~~~~~-~~---~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~  209 (326)
T 2ghs_A          156 AETGAGSIYHVA--KGKVTKLFA-DI---SIPNSICFSPDGTTGYFVDTKVNRLMRVPLD  209 (326)
T ss_dssp             CCTTCEEEEEEE--TTEEEEEEE-EE---SSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             CCCCceEEEEEe--CCcEEEeeC-CC---cccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence                 4799999  576654333 21   25678888855  468888888999999975

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.12  E-value=0.0086  Score=51.74  Aligned_cols=110  Identities=14%  Similarity=0.177  Sum_probs=73.2

Q ss_pred             CceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEE
Q psy16020         16 DTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVL   94 (151)
Q Consensus        16 ~~V~~i~~-~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~   94 (151)
                      ..|.+|.. .++++|+|..+| |..|+...+ .+  ..+    .......|+++...++.||+|+.+.++.+|.++.++.
T Consensus        63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~-~f--~~~----~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~  134 (758)
T 3ott_A           63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRAD-RY--EQP----ETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLT  134 (758)
T ss_dssp             SCEEEEEEETTTEEEEEETTE-EEEEETTTT-EE--CCC----SCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEE
T ss_pred             ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCC-EE--ECc----ccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEE
Confidence            46888765 457899999776 788886532 11  111    1111256888877789999999889999999887764


Q ss_pred             EEEEe--cCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCccc
Q psy16020         95 KSFDA--HPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        95 ~~~~~--h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      + +..  .......|.+|..+ ...+|+... . =|..||..+.+
T Consensus       135 ~-~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~  176 (758)
T 3ott_A          135 S-FDTRRNGLPNNTIYSIIRTKDNQIYVGTY-N-GLCRYIPSNGK  176 (758)
T ss_dssp             E-ECHHHHCCSCSCEEEEEECTTCCEEEEET-T-EEEEEETTTTE
T ss_pred             E-eccCCCCcCCCeEEEEEEcCCCCEEEEeC-C-CHhhCccCCCc
Confidence            3 311  11123468888887 456798775 3 47778876543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=97.10  E-value=0.013  Score=52.38  Aligned_cols=109  Identities=7%  Similarity=-0.017  Sum_probs=72.5

Q ss_pred             ceeeeEEeCC-eEEEEecCCcEE-EEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCCC
Q psy16020         17 TALPPVHVQG-RVVCALADGSVA-IFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSL   91 (151)
Q Consensus        17 ~V~~i~~~~~-~v~vgl~nG~l~-v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t~   91 (151)
                      .+.++.+.++ +++.+..++.|. +|+...        .....+..+...+.++.+..  +.|..++. +.|++||++++
T Consensus       339 ~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~--------~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg  410 (1045)
T 1k32_A          339 RYVRRGGDTKVAFIHGTREGDFLGIYDYRT--------GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG  410 (1045)
T ss_dssp             EEEEECSSSEEEEEEEETTEEEEEEEETTT--------CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             eEEeeeEcCCCeEEEEECCCceEEEEECCC--------CCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence            4555555422 344444466676 776532        11223333347788888863  56777765 68999999999


Q ss_pred             cEEEEEEecCCCCCceeEEEEeCCEEEE-EEcCC----------CeEEEEeCCccc
Q psy16020         92 VVLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLD----------STLRMYNAHTYQ  136 (151)
Q Consensus        92 ~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d----------~~l~lwd~~t~~  136 (151)
                      +..+.+..|..   .+..+.++++|-++ +.+.+          +.|++||..+.+
T Consensus       411 ~~~~~~~~~~~---~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~  463 (1045)
T 1k32_A          411 KPTVIERSREA---MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK  463 (1045)
T ss_dssp             CEEEEEECSSS---CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred             ceEEeccCCCC---CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence            99888877764   78889999877543 33332          599999999876

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=97.08  E-value=0.023  Score=43.21  Aligned_cols=121  Identities=13%  Similarity=0.069  Sum_probs=76.0

Q ss_pred             ceeeeEEe-CCeEEEEecC----------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CC
Q psy16020         17 TALPPVHV-QGRVVCALAD----------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KN   81 (151)
Q Consensus        17 ~V~~i~~~-~~~v~vgl~n----------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n   81 (151)
                      .+.++... ++++|++...          +.-.+|+.+.++.    ......- .  ...+.+++.  ++.||++.  .+
T Consensus        99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~-~--~~pngi~~spdg~~lyv~~~~~~  171 (297)
T 3g4e_A           99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQ-V--DISNGLDWSLDHKIFYYIDSLSY  171 (297)
T ss_dssp             EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEE-E--SBEEEEEECTTSCEEEEEEGGGT
T ss_pred             CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC----EEEEeec-c--ccccceEEcCCCCEEEEecCCCC
Confidence            35666654 4679988632          2345665554332    1111111 1  223567765  35687766  46


Q ss_pred             eEEEEeC--CCCcEE--EEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         82 KIHVVDP--KSLVVL--KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        82 ~I~vid~--~t~~i~--~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +|+++|.  +++++.  +.+............|+.+.+ .+|++...++.|..||..+++.+..|.+.
T Consensus       172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p  239 (297)
T 3g4e_A          172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP  239 (297)
T ss_dssp             EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred             cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence            8999975  677653  223322212246788888854 57999999999999999999999999754

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=97.04  E-value=0.011  Score=44.64  Aligned_cols=110  Identities=8%  Similarity=0.122  Sum_probs=69.1

Q ss_pred             ceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcE
Q psy16020         17 TALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVV   93 (151)
Q Consensus        17 ~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i   93 (151)
                      .+..|.+.+  +.+++...++.|.+|+...+|... .....+  ......+++|++- +++||++.++.|++||++ ++.
T Consensus       173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~--~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~-g~~  248 (296)
T 3e5z_A          173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHF--TVEPGKTDGLRVDAGGLIWASAGDGVHVLTPD-GDE  248 (296)
T ss_dssp             SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEE--CCSSSCCCSEEEBTTSCEEEEETTEEEEECTT-SCE
T ss_pred             CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEe--eCCCCCCCeEEECCCCCEEEEcCCeEEEECCC-CCE
Confidence            345555543  345555667889999886444310 112233  1112445677775 578999998899999997 788


Q ss_pred             EEEEEecCCCCCceeEEEEe-CC--EEEEEEcCCCeEEEEeCCccc
Q psy16020         94 LKSFDAHPRRESQVRQMTWA-GD--GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        94 ~~~~~~h~~~~~~I~~m~~~-~~--~vwis~~~d~~l~lwd~~t~~  136 (151)
                      ...+..+.   . +.++++. ++  .+|++..+  .|.-++..+.+
T Consensus       249 ~~~~~~~~---~-~~~~~f~~~d~~~L~v~t~~--~l~~~~~~~~~  288 (296)
T 3e5z_A          249 LGRVLTPQ---T-TSNLCFGGPEGRTLYMTVST--EFWSIETNVRG  288 (296)
T ss_dssp             EEEEECSS---C-CCEEEEESTTSCEEEEEETT--EEEEEECSCCB
T ss_pred             EEEEECCC---C-ceeEEEECCCCCEEEEEcCC--eEEEEEccccc
Confidence            88888664   2 7888885 33  57877653  45556666543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=97.00  E-value=0.00095  Score=56.61  Aligned_cols=118  Identities=9%  Similarity=0.069  Sum_probs=76.2

Q ss_pred             CceeeeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC---ceEEEeeeC--CEEEEEeC---------
Q psy16020         16 DTALPPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH---SVRSLAAVY--NKVWCGYK---------   80 (151)
Q Consensus        16 ~~V~~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~---pV~~m~~v~--~~Lw~g~~---------   80 (151)
                      ..+.++.+.+ +++++...||+|.+|+...+.     .  ...+..+..   .|.++.+..  +.|..++.         
T Consensus        17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~-----~--~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~   89 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNT-----S--TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY   89 (723)
T ss_dssp             CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCC-----C--EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred             ccccccEEcCCCcEEEEeCCCCEEEEECCCCc-----E--EEEeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence            4456666653 343334578999888764211     1  122222212   488888873  56777764         


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeE
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                       +.|++||.++++. +.+..+......+..+.++++|-+++...+..|++||..+.+..+..
T Consensus        90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~  150 (723)
T 1xfd_A           90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVV  150 (723)
T ss_dssp             CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEE
T ss_pred             eeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEe
Confidence             6799999999987 55554433233588888998886666666689999999987766544

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.97  E-value=0.0025  Score=51.24  Aligned_cols=115  Identities=8%  Similarity=0.057  Sum_probs=74.3

Q ss_pred             CCeEEEEecCCcEEEEEcCCCC-CCCCCcc---eEEEeCCCCCceEEEeeeCCEEEEE--e-CCeEEEEeCCCCcEEEEE
Q psy16020         25 QGRVVCALADGSVAIFRRGPDG-QWDLSKY---HTVTLGLPHHSVRSLAAVYNKVWCG--Y-KNKIHVVDPKSLVVLKSF   97 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~---~~i~l~~~~~pV~~m~~v~~~Lw~g--~-~n~I~vid~~t~~i~~~~   97 (151)
                      ++.||+|..||.|..+++..+. .|.++..   ..+....+..+      .++.+|++  . +++||.+|++++..+-.+
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~------~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~   83 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRL------ETYETLIIEPFGDGNIYYFNAHQGLQKLPL   83 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTT------TSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccc------cCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence            4689999999999999985422 4655432   11111110010      24578876  3 579999999999766656


Q ss_pred             EecCCC-CCceeE---EEE------eCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         98 DAHPRR-ESQVRQ---MTW------AGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        98 ~~h~~~-~~~I~~---m~~------~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ....-. .+++..   .+.      +.++..+.++.++.+...|++|++.+.+.....
T Consensus        84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~  141 (339)
T 2be1_A           84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS  141 (339)
T ss_dssp             EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred             ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence            543110 112221   001      256777899999999999999999999997653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=96.97  E-value=0.0054  Score=51.94  Aligned_cols=118  Identities=8%  Similarity=0.031  Sum_probs=71.4

Q ss_pred             eeeeEEeCC--eEEEEecC---------CcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeee--CCEEEEEeCCeE
Q psy16020         18 ALPPVHVQG--RVVCALAD---------GSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAV--YNKVWCGYKNKI   83 (151)
Q Consensus        18 V~~i~~~~~--~v~vgl~n---------G~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v--~~~Lw~g~~n~I   83 (151)
                      |.++.++++  +|..+..+         |.|.+|+...+.      ...+... .+...++++.+.  ++.|..++.++|
T Consensus        63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~------~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i  136 (723)
T 1xfd_A           63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD------PQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNI  136 (723)
T ss_dssp             CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC------CEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEE
T ss_pred             cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc------eEeccCCccccccccccEECCCCCEEEEEECCeE
Confidence            777777643  45555443         667777654211      1122211 111336777776  357888888999


Q ss_pred             EEEeCCCCcEEEEEEecCCCC---------------CceeEEEEeCCEEE-EEEcCC-----------------------
Q psy16020         84 HVVDPKSLVVLKSFDAHPRRE---------------SQVRQMTWAGDGVW-VSIRLD-----------------------  124 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~~~---------------~~I~~m~~~~~~vw-is~~~d-----------------------  124 (151)
                      +++|..+++..+....+....               ..+..+.++++|-+ ++.+.+                       
T Consensus       137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (723)
T 1xfd_A          137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY  216 (723)
T ss_dssp             EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred             EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence            999999998877666543210               13378889877642 233222                       


Q ss_pred             -----------CeEEEEeCCccceeeeE
Q psy16020        125 -----------STLRMYNAHTYQHLQDV  141 (151)
Q Consensus       125 -----------~~l~lwd~~t~~~l~~i  141 (151)
                                 ..|++||..+.+....+
T Consensus       217 ~~~~~G~~~~~~~l~~~d~~~~~~~~~l  244 (723)
T 1xfd_A          217 HYPKAGSENPSISLHVIGLNGPTHDLEM  244 (723)
T ss_dssp             ECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred             cCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence                       28999999988754444

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=96.91  E-value=0.098  Score=40.73  Aligned_cols=127  Identities=9%  Similarity=0.004  Sum_probs=74.4

Q ss_pred             CceeeeEEeCC--eEEEEec-CCcEEEEEcCC-CCCCCCCcceEEEeCCC-----CC------ceEEEe-ee--CCEEEE
Q psy16020         16 DTALPPVHVQG--RVVCALA-DGSVAIFRRGP-DGQWDLSKYHTVTLGLP-----HH------SVRSLA-AV--YNKVWC   77 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~-nG~l~v~~~~~-~~~wd~~~~~~i~l~~~-----~~------pV~~m~-~v--~~~Lw~   77 (151)
                      ..+..+.+.++  ++|++.. +|+|.+|+++. .|.... ....+..-..     ..      .+..+. +.  ++.||+
T Consensus       193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v  271 (365)
T 1jof_A          193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY-THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA  271 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred             CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE-ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence            45777777643  6888875 68999998753 232110 0112332110     11      477888 65  357998


Q ss_pred             EeC--C-----eEEEEeCC-CCcEEEE---EEecCCCCCceeEEEEe-----CCEEEEEEcCCCeEEEEeCCc--cceee
Q psy16020         78 GYK--N-----KIHVVDPK-SLVVLKS---FDAHPRRESQVRQMTWA-----GDGVWVSIRLDSTLRMYNAHT--YQHLQ  139 (151)
Q Consensus        78 g~~--n-----~I~vid~~-t~~i~~~---~~~h~~~~~~I~~m~~~-----~~~vwis~~~d~~l~lwd~~t--~~~l~  139 (151)
                      +..  +     +|.+||.+ ++++.+.   +..+..   .+..++++     |..++++...++.|++|+...  .+.+.
T Consensus       272 ~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~---~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~~~~  348 (365)
T 1jof_A          272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTS---GGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVA  348 (365)
T ss_dssp             EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSC---CTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEE
T ss_pred             ECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCC---CcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCceee
Confidence            873  4     89999985 7776653   332322   34445554     445566656679999998764  33344


Q ss_pred             eEeCCcc
Q psy16020        140 DVDIEPY  146 (151)
Q Consensus       140 ~idi~~~  146 (151)
                      ++++..+
T Consensus       349 ~~~~~~p  355 (365)
T 1jof_A          349 RVRIPEP  355 (365)
T ss_dssp             EEECCST
T ss_pred             EEEcCCC
Confidence            5555443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=96.89  E-value=0.059  Score=41.67  Aligned_cols=103  Identities=11%  Similarity=0.113  Sum_probs=66.7

Q ss_pred             eeEEeC--Ce-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020         20 PPVHVQ--GR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLK   95 (151)
Q Consensus        20 ~i~~~~--~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~   95 (151)
                      ...+.+  +. +|++..+|.|..|+... +     ....+.+.   ..+.++... ++++|+++.+.|+++|++++++..
T Consensus        53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~-~-----~~~~~~~~---~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~  123 (326)
T 2ghs_A           53 GPTFDPASGTAWWFNILERELHELHLAS-G-----RKTVHALP---FMGSALAKISDSKQLIASDDGLFLRDTATGVLTL  123 (326)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTT-T-----EEEEEECS---SCEEEEEEEETTEEEEEETTEEEEEETTTCCEEE
T ss_pred             CCeEeCCCCEEEEEECCCCEEEEEECCC-C-----cEEEEECC---CcceEEEEeCCCeEEEEECCCEEEEECCCCcEEE
Confidence            445554  44 55666778898887642 1     12233332   578888875 689999998899999999998754


Q ss_pred             EEEecC-CCCCceeEEEEeCCE-EEEEEcC------CCeEEEEe
Q psy16020         96 SFDAHP-RRESQVRQMTWAGDG-VWVSIRL------DSTLRMYN  131 (151)
Q Consensus        96 ~~~~h~-~~~~~I~~m~~~~~~-vwis~~~------d~~l~lwd  131 (151)
                      -..... .....++.+.++++| +|++...      .+.|..+|
T Consensus       124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~  167 (326)
T 2ghs_A          124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA  167 (326)
T ss_dssp             EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred             EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence            332111 112468899998665 6887653      35677776

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=96.84  E-value=0.053  Score=46.10  Aligned_cols=90  Identities=10%  Similarity=0.013  Sum_probs=60.3

Q ss_pred             CCCCceeeeeeCCCce----------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCC--CceEE-E
Q psy16020          3 YPHPTPYPLNKILDTA----------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSVRS-L   68 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V----------~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~--~pV~~-m   68 (151)
                      ..+.+.+|+..++.+.          ....+.+++||++..+|.|..++...+. .|.      .+++.+.  ..+.+ -
T Consensus        85 ~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~------~~~~~~~~~~~~~~sP  158 (582)
T 1flg_A           85 AKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWK------KKFADHGAGYTMTGAP  158 (582)
T ss_dssp             SSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEE------EECSCGGGTCBCCSCC
T ss_pred             CCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEee------ecCCCCCcCcccccCC
Confidence            4577889999887532          2345678999999999999999975432 353      2333210  11211 1


Q ss_pred             eeeCC------EEEEEe-------CCeEEEEeCCCCcEEEEEE
Q psy16020         69 AAVYN------KVWCGY-------KNKIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        69 ~~v~~------~Lw~g~-------~n~I~vid~~t~~i~~~~~   98 (151)
                      .+.++      .|++|+       .+.|+.+|++|++..=++.
T Consensus       159 ~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~  201 (582)
T 1flg_A          159 TIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP  201 (582)
T ss_dssp             EEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred             EEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence            23456      899987       4689999999999876554

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=96.81  E-value=0.0022  Score=54.61  Aligned_cols=108  Identities=10%  Similarity=0.150  Sum_probs=71.3

Q ss_pred             eeEEeC-CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CC---CceEEEeee--CCEEEEEeC----------Ce
Q psy16020         20 PPVHVQ-GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PH---HSVRSLAAV--YNKVWCGYK----------NK   82 (151)
Q Consensus        20 ~i~~~~-~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~---~pV~~m~~v--~~~Lw~g~~----------n~   82 (151)
                      ++.+.+ ++++++..||+|.+|+... |       +...+-. +.   ..+.++.+.  ++.|..++.          +.
T Consensus        20 ~~~~s~dg~~~~~~~d~~i~~~~~~~-g-------~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~   91 (719)
T 1z68_A           20 FPNWISGQEYLHQSADNNIVLYNIET-G-------QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT   91 (719)
T ss_dssp             CCEESSSSEEEEECTTSCEEEEESSS-C-------CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred             ccEECCCCeEEEEcCCCCEEEEEcCC-C-------cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence            445543 3555566799999998642 1       1222222 11   147888886  356776664          68


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      |++||.++++....... +   ..+..+.++++|-+++...++.|++||..+.+..+
T Consensus        92 i~~~d~~~g~~~~~~~l-~---~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~  144 (719)
T 1z68_A           92 YYIYDLSNGEFVRGNEL-P---RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQ  144 (719)
T ss_dssp             EEEEETTTTEECCSSCC-C---SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred             EEEEECCCCccccceec-C---cccccceECCCCCEEEEEECCeEEEEeCCCCCcEE
Confidence            99999999987311111 1   35888999999887777789999999998876644

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=96.69  E-value=0.01  Score=50.51  Aligned_cols=94  Identities=13%  Similarity=0.056  Sum_probs=59.8

Q ss_pred             eeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCCeEEEEeCCCCcE
Q psy16020         18 ALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVV   93 (151)
Q Consensus        18 V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i   93 (151)
                      |.++.++++  +++++. +|+|.+|+...+..     +....+.....+++++.+.  ++.|..++++.|++||..+++.
T Consensus       111 v~~~~~SpDg~~l~~~~-~~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~  184 (741)
T 2ecf_A          111 IVDYQWSPDAQRLLFPL-GGELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQ  184 (741)
T ss_dssp             SCCCEECTTSSEEEEEE-TTEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEE
T ss_pred             cceeEECCCCCEEEEEe-CCcEEEEECCCCCc-----ceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCE
Confidence            667777643  455555 59999998753210     0112333333778888886  3568888888999999999887


Q ss_pred             EEEEEecCCC-------------CCceeEEEEeCCEE
Q psy16020         94 LKSFDAHPRR-------------ESQVRQMTWAGDGV  117 (151)
Q Consensus        94 ~~~~~~h~~~-------------~~~I~~m~~~~~~v  117 (151)
                      .+....+...             ...+..+.++++|-
T Consensus       185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~  221 (741)
T 2ecf_A          185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS  221 (741)
T ss_dssp             EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred             EEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence            6655444210             01146788887765

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=96.67  E-value=0.007  Score=52.17  Aligned_cols=112  Identities=7%  Similarity=0.081  Sum_probs=72.3

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCC---Cce--EEEeee--CCEEEEEeC---------
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSV--RSLAAV--YNKVWCGYK---------   80 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~---~pV--~~m~~v--~~~Lw~g~~---------   80 (151)
                      ...++.+.++--|+..+||+|.+|+...+.     . .. -+..+.   ..+  ....+.  ++.|..+++         
T Consensus        18 ~~~~~~w~~dg~~~~~~~~~i~~~~~~~~~-----~-~~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~   90 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQENNILVFNAEYGN-----S-SV-FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY   90 (740)
T ss_dssp             CCCCEEECSSSEEEEEETTEEEEEETTTCC-----E-EE-EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred             cccccEECCCCcEEEEcCCcEEEEECCCCc-----e-EE-EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence            355667765432333349999999875322     1 11 122211   112  113333  456777775         


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                       +.+++||.++++..+ +..|.   ..+....++++|-++++..+..|++||..+++..+
T Consensus        91 ~~~~~~~d~~~~~~~~-l~~~~---~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~  146 (740)
T 4a5s_A           91 TASYDIYDLNKRQLIT-EERIP---NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR  146 (740)
T ss_dssp             EEEEEEEETTTTEECC-SSCCC---TTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred             ceEEEEEECCCCcEEE-cccCC---CcceeeEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence             578899999998654 54454   37899999999988888889999999998876543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=96.51  E-value=0.072  Score=39.97  Aligned_cols=109  Identities=9%  Similarity=0.017  Sum_probs=71.2

Q ss_pred             CceeeeEEeC-Ce--EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCC
Q psy16020         16 DTALPPVHVQ-GR--VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPK   89 (151)
Q Consensus        16 ~~V~~i~~~~-~~--v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~   89 (151)
                      ...-++.+.+ ++  +|++..+|.|..|+...      . ...+...  ...+.+|++. +++||++..  +.|++||++
T Consensus        28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~------~-~~~~~~~--~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~   98 (296)
T 3e5z_A           28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG------Q-LSPEMHP--SHHQNGHCLNKQGHLIACSHGLRRLERQREP   98 (296)
T ss_dssp             SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS------C-EEEEESS--CSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred             ccccCCeEeCCCCEEEEEeCCCCEEEEEECCC------C-eEEEECC--CCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence            3455666653 23  77788889999998642      1 2333333  3677888885 577998883  589999999


Q ss_pred             CCcEEEEEEecCC-CCCceeEEEEeCCE-EEEEEc-----------------CCCeEEEEeCC
Q psy16020         90 SLVVLKSFDAHPR-RESQVRQMTWAGDG-VWVSIR-----------------LDSTLRMYNAH  133 (151)
Q Consensus        90 t~~i~~~~~~h~~-~~~~I~~m~~~~~~-vwis~~-----------------~d~~l~lwd~~  133 (151)
                      +++.+.-...... ....++.++.+++| +|++..                 ..+.|..+|..
T Consensus        99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~  161 (296)
T 3e5z_A           99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD  161 (296)
T ss_dssp             TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred             CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence            9987655443221 12356788888665 588742                 24577777775

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=96.47  E-value=0.034  Score=49.81  Aligned_cols=112  Identities=11%  Similarity=0.005  Sum_probs=75.9

Q ss_pred             ceeeeEEe-CC-e-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCC-ceEEEeeeCC-EEEEEeC-CeEE-EEeCC
Q psy16020         17 TALPPVHV-QG-R-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH-SVRSLAAVYN-KVWCGYK-NKIH-VVDPK   89 (151)
Q Consensus        17 ~V~~i~~~-~~-~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~-pV~~m~~v~~-~Lw~g~~-n~I~-vid~~   89 (151)
                      .+.++.+. ++ + +..+ ++|.|.+++..        ......+..+.. .++++.+.++ .|+.+++ +.|+ ++|.+
T Consensus       297 ~v~~~~~S~pdG~~la~~-~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~  367 (1045)
T 1k32_A          297 SKFAEDFSPLDGDLIAFV-SRGQAFIQDVS--------GTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYR  367 (1045)
T ss_dssp             GGGEEEEEECGGGCEEEE-ETTEEEEECTT--------SSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETT
T ss_pred             ccceeeecCCCCCEEEEE-EcCEEEEEcCC--------CCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECC
Confidence            57788877 43 3 4433 38888887653        122334443334 7888877732 4665554 5899 99999


Q ss_pred             CCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         90 SLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        90 t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      +++... +..|.   ..+..+.++++|- .++.+.++.|++||..+++....+
T Consensus       368 ~~~~~~-l~~~~---~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~  416 (1045)
T 1k32_A          368 TGKAEK-FEENL---GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE  416 (1045)
T ss_dssp             TCCEEE-CCCCC---CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             CCCceE-ecCCc---cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence            887654 33553   4799999997765 557788899999999998876655

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=96.46  E-value=0.24  Score=39.78  Aligned_cols=114  Identities=11%  Similarity=0.011  Sum_probs=75.5

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE----EeCCC-CCceEEEeee--CCEEEEEeC--CeEE
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV----TLGLP-HHSVRSLAAV--YNKVWCGYK--NKIH   84 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i----~l~~~-~~pV~~m~~v--~~~Lw~g~~--n~I~   84 (151)
                      ..+.++...+  +++|++-.+|.|..|+....      ....+    ..+.. ..|.+.|++.  ++.||++..  ++|+
T Consensus       219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~------~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~  292 (409)
T 3hrp_A          219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ------EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY  292 (409)
T ss_dssp             SCCCBCEECTTSSEEEEECTTCEEEEEETTTC------CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred             CCcEEEEEeCCCCeEEEEECCCcEEEEECCCC------CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence            4566677664  78999888898998886421      11222    11110 1344478876  478999873  6899


Q ss_pred             EEeCCCCcEEEEEEecCC------------CCCceeEEEEeCCE-EEEEEc-CCCeEEEEeCCccce
Q psy16020         85 VVDPKSLVVLKSFDAHPR------------RESQVRQMTWAGDG-VWVSIR-LDSTLRMYNAHTYQH  137 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~------------~~~~I~~m~~~~~~-vwis~~-~d~~l~lwd~~t~~~  137 (151)
                      .||.+..  ...+.++..            .......|+++++| +|++-+ ....|+.||..+++.
T Consensus       293 ~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v  357 (409)
T 3hrp_A          293 KITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV  357 (409)
T ss_dssp             EECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred             EEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence            9987643  344554430            12358889998665 799999 999999999766654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=96.45  E-value=0.033  Score=46.11  Aligned_cols=106  Identities=9%  Similarity=-0.073  Sum_probs=67.1

Q ss_pred             eeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-C----CeEEEEeCCC
Q psy16020         19 LPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-K----NKIHVVDPKS   90 (151)
Q Consensus        19 ~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~----n~I~vid~~t   90 (151)
                      .++...++ .+|++..++.+.+|+...        .+...+..  .|-.+..+.  +..|..++ +    ..|+++|+++
T Consensus       115 ~~~s~dg~~~~~~s~~~~~~~l~d~~~--------g~~~~l~~--~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~  184 (582)
T 3o4h_A          115 LSGVDTGEAVVFTGATEDRVALYALDG--------GGLRELAR--LPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS  184 (582)
T ss_dssp             EEEEECSSCEEEEEECSSCEEEEEEET--------TEEEEEEE--ESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred             eeeCCCCCeEEEEecCCCCceEEEccC--------CcEEEeec--CCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence            34444443 477777777777886532        12222222  111454553  45555444 3    4699999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEEEE-EEcCCC--eEEEEeCCcccee
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDS--TLRMYNAHTYQHL  138 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~vwi-s~~~d~--~l~lwd~~t~~~l  138 (151)
                      ++.. ++..|..   .+....++++|-++ +.++++  .|++||..+.+..
T Consensus       185 g~~~-~l~~~~~---~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~  231 (582)
T 3o4h_A          185 GGLR-VFDSGEG---SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE  231 (582)
T ss_dssp             CCCE-EECCSSC---EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred             CCce-EeecCCC---ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence            9875 6666653   78999999877533 555677  8999999987765

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=96.36  E-value=0.025  Score=46.84  Aligned_cols=76  Identities=13%  Similarity=0.118  Sum_probs=54.0

Q ss_pred             EeCCCCCceEEEeeeC--CEEEEEeC-C--eEEEEeCCCCcEEEEEEecCCCCCceeEEE--------EeCCE-EEEEEc
Q psy16020         57 TLGLPHHSVRSLAAVY--NKVWCGYK-N--KIHVVDPKSLVVLKSFDAHPRRESQVRQMT--------WAGDG-VWVSIR  122 (151)
Q Consensus        57 ~l~~~~~pV~~m~~v~--~~Lw~g~~-n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~--------~~~~~-vwis~~  122 (151)
                      .+......++...+..  +.|+.+.. +  +|++||.++++.. .+..|..   .+..+.        ++++| ++++.+
T Consensus       189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~spdg~~~~~~~  264 (582)
T 3o4h_A          189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK---DFSSYRPTAITWLGYLPDGRLAVVAR  264 (582)
T ss_dssp             EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS---HHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred             EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc---ChhhhhhccccceeEcCCCcEEEEEE
Confidence            4444347788888873  56775543 4  7999999999988 6666643   455445        77664 688899


Q ss_pred             CCCeEEEEeCCcccee
Q psy16020        123 LDSTLRMYNAHTYQHL  138 (151)
Q Consensus       123 ~d~~l~lwd~~t~~~l  138 (151)
                      .++.+++|+.  ++.+
T Consensus       265 ~~g~~~l~~~--g~~~  278 (582)
T 3o4h_A          265 REGRSAVFID--GERV  278 (582)
T ss_dssp             ETTEEEEEET--TEEE
T ss_pred             cCCcEEEEEE--CCee
Confidence            9999999998  5444

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=96.35  E-value=0.039  Score=42.04  Aligned_cols=95  Identities=7%  Similarity=0.031  Sum_probs=59.0

Q ss_pred             eeEEeC--CeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCC
Q psy16020         20 PPVHVQ--GRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKS   90 (151)
Q Consensus        20 ~i~~~~--~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t   90 (151)
                      .|.+.+  +.+|++-..      +.|.+|+...++   +.....+.-.. ..-...|.+- +++||++.++.|++||+ +
T Consensus       192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~~-~~~pdgi~~d~~G~lwv~~~~gv~~~~~-~  266 (305)
T 3dr2_A          192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASVP-DGLPDGFCVDRGGWLWSSSGTGVCVFDS-D  266 (305)
T ss_dssp             EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECCS-SSCCCSEEECTTSCEEECCSSEEEEECT-T
T ss_pred             ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEECC-CCCCCeEEECCCCCEEEecCCcEEEECC-C
Confidence            344443  358888765      689998875433   22222221111 1223455553 46799999889999999 5


Q ss_pred             CcEEEEEEecCCCCCceeEEEEe--CCEEEEEEcC
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWA--GDGVWVSIRL  123 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~--~~~vwis~~~  123 (151)
                      ++....+....    .+..++++  +..+|++..+
T Consensus       267 g~~~~~~~~~~----~~~~~~f~~d~~~L~it~~~  297 (305)
T 3dr2_A          267 GQLLGHIPTPG----TASNCTFDQAQQRLFITGGP  297 (305)
T ss_dssp             SCEEEEEECSS----CCCEEEECTTSCEEEEEETT
T ss_pred             CCEEEEEECCC----ceeEEEEeCCCCEEEEEcCC
Confidence            77777777543    47777885  4457887763

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=96.12  E-value=0.019  Score=47.94  Aligned_cols=72  Identities=14%  Similarity=0.210  Sum_probs=56.9

Q ss_pred             CCEEEEEeC--CeEEEEeCCCC----cEEEEEE---ecCC-CCCceeEEEEeCCEEEEEEcCC------CeEEEEeCCcc
Q psy16020         72 YNKVWCGYK--NKIHVVDPKSL----VVLKSFD---AHPR-RESQVRQMTWAGDGVWVSIRLD------STLRMYNAHTY  135 (151)
Q Consensus        72 ~~~Lw~g~~--n~I~vid~~t~----~i~~~~~---~h~~-~~~~I~~m~~~~~~vwis~~~d------~~l~lwd~~t~  135 (151)
                      .++||+++.  ++|||||..|.    ++.++++   .++. ..+.-+.+.+.++|+++|+..+      +.|-++|..|+
T Consensus        95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~  174 (462)
T 2ece_A           95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSF  174 (462)
T ss_dssp             SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTC
T ss_pred             CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCC
Confidence            477999994  68999998876    8999996   2110 1235677778888899988888      78999999999


Q ss_pred             ceeeeEeC
Q psy16020        136 QHLQDVDI  143 (151)
Q Consensus       136 ~~l~~idi  143 (151)
                      +.+..+..
T Consensus       175 ~v~~~~~~  182 (462)
T 2ece_A          175 EPLGKWEI  182 (462)
T ss_dssp             CEEEECCS
T ss_pred             eEEEEEcc
Confidence            99998853

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=95.99  E-value=0.0062  Score=53.51  Aligned_cols=98  Identities=10%  Similarity=0.133  Sum_probs=61.2

Q ss_pred             CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEE
Q psy16020         16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLK   95 (151)
Q Consensus        16 ~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~   95 (151)
                      .|.+.....++.++|+|.||-+.-++|.+++.|+   +..+.-+..-.+++.+       |-+ ++++            
T Consensus       162 ~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~---~~~Fnd~s~l~SL~~l-------f~~-~~~~------------  218 (729)
T 3f7f_A          162 VPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYE---PLLFNDNSYLKCLTRF-------FSR-SSKS------------  218 (729)
T ss_dssp             CEEEEEECSSSBEEEEETTSCEECCEESSSSCEE---CCCCCCCGGGGGGSTT-------CCT-TCSS------------
T ss_pred             CCcEEEEECCCeEEEEEcCCCEEEEEeccCCCcc---eeeecCCchhhhhHHh-------hcC-CCCC------------
Confidence            3444555567789999999999999998665441   1111111111334432       110 1111            


Q ss_pred             EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                            +.+..|.++... +...++...|.+||+|+..|++++++.|+
T Consensus       219 ------~~~~~Is~~~~~-~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          219 ------DYDSVISCKLFH-ERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             ------CCCCEEEEEEET-TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             ------CcCceEEEeccC-CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence                  111356666654 55566999999999999999999999998

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=95.73  E-value=0.048  Score=49.11  Aligned_cols=96  Identities=16%  Similarity=0.254  Sum_probs=56.7

Q ss_pred             eCCeEEEEecCCcEEEEEcCC-CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEecCC
Q psy16020         24 VQGRVVCALADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDAHPR  102 (151)
Q Consensus        24 ~~~~v~vgl~nG~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~  102 (151)
                      .++.++|++.||-|.-++|++ ++.|.   ...+.-+..-.+++.+....                       .+.....
T Consensus       180 ~~~~l~Vsl~dGgLlrl~r~~~~~~~~---~~~f~~~s~~~sl~~l~~~~-----------------------~~~~~~~  233 (950)
T 4gq2_M          180 STSEICVSFFNGGLTKIILNPKDASHY---EQHIDDSSYLFSLKKYLSLQ-----------------------AFKADYR  233 (950)
T ss_dssp             SSSEEEEEETTSCEEEEEEETTTTEEE---EEEECCCCCCCBCC------------------------------CCSSCC
T ss_pred             cCCeEEEEECCCCEEEEEecCCCCCcc---eeeecCCcHHHhhhhhcccc-----------------------cCCCCCC
Confidence            467899999999999998853 33331   11111111113343333210                       0011111


Q ss_pred             CCCceeEEEEeC-CEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        103 RESQVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       103 ~~~~I~~m~~~~-~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ....|.+++..+ ....++..+|.+||+|+..|++++.+.|+..
T Consensus       234 ~~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~  277 (950)
T 4gq2_M          234 SPNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ  277 (950)
T ss_dssp             CTTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred             CcceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence            122556666654 4556699999999999999999999999854

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=95.70  E-value=0.29  Score=37.39  Aligned_cols=108  Identities=9%  Similarity=0.001  Sum_probs=69.7

Q ss_pred             ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEE--eCC-CCCceEEEeee--CCEEEEEeC---------
Q psy16020         17 TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVT--LGL-PHHSVRSLAAV--YNKVWCGYK---------   80 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~--l~~-~~~pV~~m~~v--~~~Lw~g~~---------   80 (151)
                      .+..|...  ++++|++...+.|..|+... +.     ...+.  ... +....+.+++-  +++||++..         
T Consensus        81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~-g~-----~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~  154 (322)
T 2fp8_A           81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEG-GH-----ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV  154 (322)
T ss_dssp             CEEEEEEETTTTEEEEEETTTEEEEECTTC-EE-----CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred             CCceEEEcCCCCcEEEEECCCCEEEEeCCC-CE-----EEEecccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence            46778776  57999997666677776431 11     11221  111 11224556664  468999862         


Q ss_pred             ----------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCc
Q psy16020         81 ----------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        81 ----------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t  134 (151)
                                +.|+.+|++++++......-    ...+.|+++++  .+|++-.....|..||..+
T Consensus       155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~----~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~  216 (322)
T 2fp8_A          155 QQIMDTSDKTGRLIKYDPSTKETTLLLKEL----HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG  216 (322)
T ss_dssp             HHHHHHTCCCEEEEEEETTTTEEEEEEEEE----SCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred             ceehcccCCCceEEEEeCCCCEEEEeccCC----ccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence                      47999999988876544322    24566788855  4798988889999999874

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=95.51  E-value=0.92  Score=41.77  Aligned_cols=121  Identities=16%  Similarity=0.185  Sum_probs=78.8

Q ss_pred             CCCceeeeeeCCC--ceeeeEEe------CCeEEEEe----------cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCce
Q psy16020          4 PHPTPYPLNKILD--TALPPVHV------QGRVVCAL----------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV   65 (151)
Q Consensus         4 ~~~~~l~~i~l~~--~V~~i~~~------~~~v~vgl----------~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV   65 (151)
                      .+++.+.++.|.+  .++|+...      +.++.||+          ..|.|.+|+.. ++  .++..+..++   +.||
T Consensus       815 ~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~~--kL~lv~~~~v---~g~v  888 (1158)
T 3ei3_A          815 HTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS-DG--KLQTVAEKEV---KGAV  888 (1158)
T ss_dssp             TTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE-TT--EEEEEEEEEE---SSCE
T ss_pred             CCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE-CC--EEEEEEEEEc---CCcC
Confidence            3567888888883  78888753      35788888          45889999885 11  2222222333   3899


Q ss_pred             EEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEEe--cCCCCCceeEEEEeCCEEEEEEcCCCe-EEEEeCC
Q psy16020         66 RSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFDA--HPRRESQVRQMTWAGDGVWVSIRLDST-LRMYNAH  133 (151)
Q Consensus        66 ~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~~--h~~~~~~I~~m~~~~~~vwis~~~d~~-l~lwd~~  133 (151)
                      ++|...+++|-+|.|++|+++|....+.++ .+.  +..  -.+..+...++-+.++--..+. +--|+..
T Consensus       889 ~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~--i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~  956 (1158)
T 3ei3_A          889 YSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNN--IMALYLKTKGDFILVGDLMRSVLLLAYKPM  956 (1158)
T ss_dssp             EEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCC--SCEEEEEEETTEEEEEESSBCEEEEEEETT
T ss_pred             EEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeecccc--EEEEEEeccCCEEEEEEhhheEEEEEEEcC
Confidence            999999999999999999999987544333 222  211  1234666667777666555544 3335554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=95.45  E-value=0.68  Score=37.29  Aligned_cols=116  Identities=14%  Similarity=0.215  Sum_probs=81.5

Q ss_pred             eEEEEecCCcEEEEEcC--CCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEEEeCC-eEEEEeCC-----CCcEEEEE
Q psy16020         27 RVVCALADGSVAIFRRG--PDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKN-KIHVVDPK-----SLVVLKSF   97 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~--~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~g~~n-~I~vid~~-----t~~i~~~~   97 (151)
                      ++|+.-.+|.+..|+..  .+|....+....++++.  +|=-|.+= ..++||+|-.+ .|..||++     ++++...+
T Consensus       145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~  222 (355)
T 3amr_A          145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA  222 (355)
T ss_dssp             EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred             EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence            59999999999999884  33434444456678876  55444443 24899999975 69999966     46666655


Q ss_pred             EecCCCCCceeEEEEe----CCE-EEEEEcCCCeEEEEeCC-ccceeeeEeCCc
Q psy16020         98 DAHPRRESQVRQMTWA----GDG-VWVSIRLDSTLRMYNAH-TYQHLQDVDIEP  145 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~----~~~-vwis~~~d~~l~lwd~~-t~~~l~~idi~~  145 (151)
                      .. ..-..-+..|+..    +.+ +++|...++..-+||.+ +++.+..|.|..
T Consensus       223 ~~-g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~  275 (355)
T 3amr_A          223 DG-RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITD  275 (355)
T ss_dssp             SS-SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEECC
T ss_pred             cC-CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEecC
Confidence            31 1112257888775    234 67888889999999997 899999986543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=95.42  E-value=0.67  Score=35.78  Aligned_cols=111  Identities=14%  Similarity=0.077  Sum_probs=70.6

Q ss_pred             ceeeeEEeC-CeEEEEec------CCcEEEEEcCCCCCCCCCcceEEEeCC----CCCceEEEeee--CCEEEEEe----
Q psy16020         17 TALPPVHVQ-GRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAV--YNKVWCGY----   79 (151)
Q Consensus        17 ~V~~i~~~~-~~v~vgl~------nG~l~v~~~~~~~~wd~~~~~~i~l~~----~~~pV~~m~~v--~~~Lw~g~----   79 (151)
                      .+..|...+ +++|+.-.      ++.|.+|+...+     +..+.+.+..    +....+.+++-  ++.+|++.    
T Consensus        68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg-----~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~  142 (343)
T 2qe8_A           68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN-----QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD  142 (343)
T ss_dssp             CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT-----EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred             EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC-----eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence            677887764 78998753      378999986421     1223445532    11345778886  47899884    


Q ss_pred             -CCeEEEEeCCCCcEEEEEEecCCC--------------------------CCceeEEEEeCCE--EEEEEcCCCeEEEE
Q psy16020         80 -KNKIHVVDPKSLVVLKSFDAHPRR--------------------------ESQVRQMTWAGDG--VWVSIRLDSTLRMY  130 (151)
Q Consensus        80 -~n~I~vid~~t~~i~~~~~~h~~~--------------------------~~~I~~m~~~~~~--vwis~~~d~~l~lw  130 (151)
                       .+.|+++|.++++..+.+..|...                          ...++.|++++++  ++++-..+..|..+
T Consensus       143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~  222 (343)
T 2qe8_A          143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI  222 (343)
T ss_dssp             GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred             CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence             368999999999988877654210                          0125777887654  55555555566666


Q ss_pred             eC
Q psy16020        131 NA  132 (151)
Q Consensus       131 d~  132 (151)
                      |+
T Consensus       223 ~~  224 (343)
T 2qe8_A          223 KS  224 (343)
T ss_dssp             EH
T ss_pred             EH
Confidence            54

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=95.41  E-value=0.62  Score=35.43  Aligned_cols=108  Identities=8%  Similarity=0.057  Sum_probs=69.2

Q ss_pred             eeEEeC--CeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC------------CeE
Q psy16020         20 PPVHVQ--GRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------------NKI   83 (151)
Q Consensus        20 ~i~~~~--~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~------------n~I   83 (151)
                      .|...+  +.+|++ ..++.|.+|+.....   ......+.- .+ . -..|++- ++.||++..            +.|
T Consensus       189 gia~~~dg~~lyv~d~~~~~I~~~~~~~~~---~~~~~~~~~-~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v  262 (322)
T 2fp8_A          189 GAEVSADSSFVLVAEFLSHQIVKYWLEGPK---KGTAEVLVK-IP-N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG  262 (322)
T ss_dssp             EEEECTTSSEEEEEEGGGTEEEEEESSSTT---TTCEEEEEE-CS-S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred             ceEECCCCCEEEEEeCCCCeEEEEECCCCc---CCccceEEe-CC-C-CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence            445543  369988 456899999875211   112222221 11 3 3556654 467999983            469


Q ss_pred             EEEeCCCCcEEEEEEecCCC-CCceeEEEEeCCEEEEEEcCCCeEEEEeCCc
Q psy16020         84 HVVDPKSLVVLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~~-~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t  134 (151)
                      +.+|++ +++...+...... ...+..+...+..+|++......|..++...
T Consensus       263 ~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          263 IKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             EEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred             EEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence            999985 8888888754211 2457777777888999999999999998763

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=95.08  E-value=0.038  Score=50.52  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=31.0

Q ss_pred             eeEEEEe-CCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020        107 VRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus       107 I~~m~~~-~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +.+++.. .....++..+|.+||+|+..|++++++.|+...
T Consensus       240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~~  280 (1139)
T 4fhn_B          240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQT  280 (1139)
T ss_dssp             BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCCS
T ss_pred             eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhhc
Confidence            3333333 445567999999999999999999999998643

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=94.72  E-value=0.2  Score=43.07  Aligned_cols=100  Identities=14%  Similarity=0.163  Sum_probs=71.4

Q ss_pred             CcEEEEEcCCCCCCCCCc-ceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCCCCc------------EEEEE
Q psy16020         35 GSVAIFRRGPDGQWDLSK-YHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLV------------VLKSF   97 (151)
Q Consensus        35 G~l~v~~~~~~~~wd~~~-~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~------------i~~~~   97 (151)
                      |.|.|.+.....   -.. ...++++.  +|- ++.+.  ++.++++..  ++|.|||.++++            +..+.
T Consensus       254 ~~V~VID~~~~~---~~~~~~~Ipvg~--~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v  327 (595)
T 1fwx_A          254 NGVKVVDGRKEA---SSLFTRYIPIAN--NPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP  327 (595)
T ss_dssp             TTEEEEECSGGG---CCSSEEEEEEES--SCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred             CcEEEEeCcccC---CceeEEEEecCC--Cce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence            458888865310   012 35677775  554 44554  356888884  799999999874            55555


Q ss_pred             EecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCc----------cceeeeEeCC
Q psy16020         98 DAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHT----------YQHLQDVDIE  144 (151)
Q Consensus        98 ~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t----------~~~l~~idi~  144 (151)
                      +.-    ....+++++++|- |++.--|+.|-.||..+          .+.++++++.
T Consensus       328 ~vG----~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~  381 (595)
T 1fwx_A          328 ELG----LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH  381 (595)
T ss_dssp             BCC----SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred             CCC----CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence            543    4788999997654 78999999999999988          6788888874

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=94.65  E-value=0.011  Score=47.48  Aligned_cols=94  Identities=9%  Similarity=0.072  Sum_probs=60.7

Q ss_pred             CCCCCceeeeeeCC--CceeeeEE----eCCeEEEE--ecCCcEEEEEcCCCCCCCCCcceEEEeCC--CCCceEE---E
Q psy16020          2 EYPHPTPYPLNKIL--DTALPPVH----VQGRVVCA--LADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRS---L   68 (151)
Q Consensus         2 ~~~~~~~l~~i~l~--~~V~~i~~----~~~~v~vg--l~nG~l~v~~~~~~~~wd~~~~~~i~l~~--~~~pV~~---m   68 (151)
                      +..+.+.+|+++.+  .+++....    .++.+|++  ..||.|..|+... |.|.    ..+.+..  ..+|++.   .
T Consensus        26 d~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~----~~~~~~~lv~~SP~~~~~~p  100 (339)
T 2be1_A           26 DRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQK----LPLSIRQLVSTSPLHLKTNI  100 (339)
T ss_dssp             ETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEE----EEEEHHHHHTTCSEEEECC-
T ss_pred             ECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEE----eeeccccceeccccccCCCc
Confidence            35678899999887  44443321    13467777  5899999998743 4321    1222211  1256553   1


Q ss_pred             ee-------eCCEEEEEeC-CeEEEEeCCCCcEEEEEEec
Q psy16020         69 AA-------VYNKVWCGYK-NKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        69 ~~-------v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h  100 (151)
                      .+       .++.+++|+. ++++.+|+.||+++.++...
T Consensus       101 vv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~  140 (339)
T 2be1_A          101 VVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG  140 (339)
T ss_dssp             ---------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred             eeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence            11       4678999996 59999999999999998743

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=94.62  E-value=0.56  Score=40.30  Aligned_cols=121  Identities=12%  Similarity=0.017  Sum_probs=80.1

Q ss_pred             CCCceeeeeeCC--CceeeeEE----eCCeEEEEe------------------cCCcEEEEEcCCCCCCCCCcceEEEeC
Q psy16020          4 PHPTPYPLNKIL--DTALPPVH----VQGRVVCAL------------------ADGSVAIFRRGPDGQWDLSKYHTVTLG   59 (151)
Q Consensus         4 ~~~~~l~~i~l~--~~V~~i~~----~~~~v~vgl------------------~nG~l~v~~~~~~~~wd~~~~~~i~l~   59 (151)
                      .+.+|.+.|.+|  ..+..+..    ..++||++.                  -+|.+.+.+...     .+....+.++
T Consensus       120 ~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t-----~~v~~qI~Vg  194 (595)
T 1fwx_A          120 DVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK-----WEVAWQVLVS  194 (595)
T ss_dssp             TTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT-----TEEEEEEEES
T ss_pred             CCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC-----CeEEEEEEeC
Confidence            455777877776  56777764    457899994                  345788877642     1233445554


Q ss_pred             CCCCceEEEee--eCCEEEEEeC---------------------------------------CeEEEEeCCC--CcE-EE
Q psy16020         60 LPHHSVRSLAA--VYNKVWCGYK---------------------------------------NKIHVVDPKS--LVV-LK   95 (151)
Q Consensus        60 ~~~~pV~~m~~--v~~~Lw~g~~---------------------------------------n~I~vid~~t--~~i-~~   95 (151)
                      .  .| .-|..  -++.+|+.|.                                       |.|.|||+.+  ++. .+
T Consensus       195 g--~p-d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~  271 (595)
T 1fwx_A          195 G--NL-DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTR  271 (595)
T ss_dssp             S--CC-CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEE
T ss_pred             C--Cc-cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEE
Confidence            3  22 11222  1345555552                                       3499999998  666 77


Q ss_pred             EEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccc
Q psy16020         96 SFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~  136 (151)
                      .+..-.    +.+.+..+++|  ++++...+++|.++|..+.+
T Consensus       272 ~Ipvg~----~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~  310 (595)
T 1fwx_A          272 YIPIAN----NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFD  310 (595)
T ss_dssp             EEEEES----SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHH
T ss_pred             EEecCC----CceEEEEcCCCCEEEEeCCCCCeEEEEECcccc
Confidence            777653    67888888655  68888999999999999874

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=94.52  E-value=1.2  Score=35.73  Aligned_cols=110  Identities=12%  Similarity=0.061  Sum_probs=66.8

Q ss_pred             ceeeeEE-eCCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--C-eEEEEeCC
Q psy16020         17 TALPPVH-VQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--N-KIHVVDPK   89 (151)
Q Consensus        17 ~V~~i~~-~~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n-~I~vid~~   89 (151)
                      .+..|.. .++++|++-. ++.|.+|+... +     ....+.-.. ..|-  +++.  ++.||++..  + +|+++|..
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~-g-----~~~~~~~~~-~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~  202 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDD-N-----KVTTVHPGF-KGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKA  202 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTT-T-----EEEEEEETC-CBCB--CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCC-C-----EEEEeeccC-CCCc--eeEecCCCcEEEEecCCCceEEEEEcC
Confidence            4455555 3567888865 47788887642 1     111221111 1343  5554  467888874  3 89999998


Q ss_pred             CCcEEEEEEec-CCCCCceeEEEEeC-C-EEEEEEcCCCeEEEEeCCccc
Q psy16020         90 SLVVLKSFDAH-PRRESQVRQMTWAG-D-GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        90 t~~i~~~~~~h-~~~~~~I~~m~~~~-~-~vwis~~~d~~l~lwd~~t~~  136 (151)
                      +....+.+... ......++.+++++ + .+|+ ...++.|+.||..+.+
T Consensus       203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~  251 (409)
T 3hrp_A          203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQE  251 (409)
T ss_dssp             GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCC
T ss_pred             CCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCC
Confidence            77655554211 11234678888886 4 4566 5668899999998654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=94.19  E-value=0.027  Score=47.74  Aligned_cols=65  Identities=9%  Similarity=0.057  Sum_probs=46.9

Q ss_pred             CEEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE-EcC---------CCeEEEEeCCccce
Q psy16020         73 NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS-IRL---------DSTLRMYNAHTYQH  137 (151)
Q Consensus        73 ~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis-~~~---------d~~l~lwd~~t~~~  137 (151)
                      +++..+. ++.|++||+.+++..+.+..|......+..+.++++|-++. .++         ++.|++||..+++.
T Consensus        27 g~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~  102 (719)
T 1z68_A           27 QEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF  102 (719)
T ss_dssp             SEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred             CeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence            4544443 56899999999998888876642112488999998776443 332         68999999998877

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=94.18  E-value=1.3  Score=33.16  Aligned_cols=123  Identities=12%  Similarity=0.101  Sum_probs=72.5

Q ss_pred             CceeeeeeCCCceeeeEEeCCeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe
Q psy16020          6 PTPYPLNKILDTALPPVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY   79 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~   79 (151)
                      ++.+.++..+-.-.+....++++|+..+.      ..+.+|+.. ...|..-    -++.. ...-.++...+++||+-.
T Consensus        93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~----~~~p~-~r~~~~~~~~~~~iyv~G  166 (301)
T 2vpj_A           93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPN-IDQWSML----GDMQT-AREGAGLVVASGVIYCLG  166 (301)
T ss_dssp             CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETT-TTEEEEE----EECSS-CCBSCEEEEETTEEEEEC
T ss_pred             eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCC-CCeEEEC----CCCCC-CcccceEEEECCEEEEEC
Confidence            44555444443444455568888887642      357778764 3456321    01211 122235566789988764


Q ss_pred             C-------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020         80 K-------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ  136 (151)
Q Consensus        80 ~-------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~  136 (151)
                      |       +.++++|+++.+-... ..-+ ....-..++..++.+++.++.+     ..+.+||..+.+
T Consensus       167 G~~~~~~~~~~~~~d~~~~~W~~~-~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  233 (301)
T 2vpj_A          167 GYDGLNILNSVEKYDPHTGHWTNV-TPMA-TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS  233 (301)
T ss_dssp             CBCSSCBCCCEEEEETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCCCCcccceEEEEeCCCCcEEeC-CCCC-cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence            3       5799999998765443 2111 1223445666688888888764     568999998654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=94.17  E-value=0.8  Score=38.17  Aligned_cols=74  Identities=14%  Similarity=0.061  Sum_probs=48.0

Q ss_pred             CceEEEeee--CCEEEEEe-C--------CeEEEEeCC-CC---cEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCC-
Q psy16020         63 HSVRSLAAV--YNKVWCGY-K--------NKIHVVDPK-SL---VVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDS-  125 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~-~--------n~I~vid~~-t~---~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~-  125 (151)
                      ..+....+.  ++.|..++ .        +.|+++|++ ++   +..+-...|.   ..+..+.++++| ++++.++++ 
T Consensus       188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~---~~~~~~~~spdg~l~~~~~~~~~  264 (662)
T 3azo_A          188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE---EAIAQAEWAPDGSLIVATDRTGW  264 (662)
T ss_dssp             SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT---BCEEEEEECTTSCEEEEECTTSS
T ss_pred             CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC---ceEcceEECCCCeEEEEECCCCC
Confidence            455555554  35676554 2        379999999 67   4444444443   378888988655 566777777 


Q ss_pred             -eEEEEeCCccceee
Q psy16020        126 -TLRMYNAHTYQHLQ  139 (151)
Q Consensus       126 -~l~lwd~~t~~~l~  139 (151)
                       .|.+||..+.+..+
T Consensus       265 ~~l~~~~~~~~~~~~  279 (662)
T 3azo_A          265 WNLHRVDPATGAATQ  279 (662)
T ss_dssp             CEEEEECTTTCCEEE
T ss_pred             eEEEEEECCCCceee
Confidence             78888876665443

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=94.16  E-value=0.097  Score=44.99  Aligned_cols=73  Identities=14%  Similarity=0.157  Sum_probs=49.6

Q ss_pred             EEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCce--eEEEEeCCEEEEEEcCC----------CeEEEEeCC
Q psy16020         67 SLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQV--RQMTWAGDGVWVSIRLD----------STLRMYNAH  133 (151)
Q Consensus        67 ~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I--~~m~~~~~~vwis~~~d----------~~l~lwd~~  133 (151)
                      ++... ++++.+..++.|++||.+|++....+..|+.....+  ....++++|-++....+          +.+.+||..
T Consensus        21 ~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~  100 (740)
T 4a5s_A           21 SLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN  100 (740)
T ss_dssp             CEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             ccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC
Confidence            44444 345444347899999999999988888886433333  33677877764444433          678899999


Q ss_pred             ccceee
Q psy16020        134 TYQHLQ  139 (151)
Q Consensus       134 t~~~l~  139 (151)
                      +++..+
T Consensus       101 ~~~~~~  106 (740)
T 4a5s_A          101 KRQLIT  106 (740)
T ss_dssp             TTEECC
T ss_pred             CCcEEE
Confidence            987654

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=93.75  E-value=1.2  Score=33.58  Aligned_cols=67  Identities=15%  Similarity=0.129  Sum_probs=43.1

Q ss_pred             ceEEEeeeCCEEEEEe-C--------CeEEEEeCCCCcEEEEEEecCCCCCceeE-EEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         64 SVRSLAAVYNKVWCGY-K--------NKIHVVDPKSLVVLKSFDAHPRRESQVRQ-MTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        64 pV~~m~~v~~~Lw~g~-~--------n~I~vid~~t~~i~~~~~~h~~~~~~I~~-m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      ++.....-++.|+.+. .        ..|+++|  +++..+-...|.   ..+.. +.++ ++++++...++..+|| ..
T Consensus       218 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~---~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~  290 (347)
T 2gop_A          218 SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD---RGVGQAKIKD-GKVYFTLFEEGSVNLY-IW  290 (347)
T ss_dssp             SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC---SEEEEEEEET-TEEEEEEEETTEEEEE-EE
T ss_pred             ceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC---cccCCccEEc-CcEEEEEecCCcEEEE-Ec
Confidence            3444433345565554 2        3799999  666544333332   36775 7787 7788888899999999 76


Q ss_pred             ccce
Q psy16020        134 TYQH  137 (151)
Q Consensus       134 t~~~  137 (151)
                      +++.
T Consensus       291 ~g~~  294 (347)
T 2gop_A          291 DGEI  294 (347)
T ss_dssp             SSSE
T ss_pred             CCce
Confidence            5544

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=93.64  E-value=1.5  Score=32.17  Aligned_cols=102  Identities=7%  Similarity=-0.034  Sum_probs=63.1

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPR  102 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~  102 (151)
                      +++.+- ++.|..++.+....-..+....+....  .....+++-  +++||++..  ++|+++|+++......+..   
T Consensus         3 ~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~--~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~---   76 (267)
T 1npe_A            3 HLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPA--KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ---   76 (267)
T ss_dssp             EEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEE--EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT---
T ss_pred             EEEEEc-CCeEEEEEecCcccccccceeeecCCC--CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC---
Confidence            466665 457777776421100000111222222  345677775  478998873  6899999987765443321   


Q ss_pred             CCCceeEEEEe--CCEEEEEEcCCCeEEEEeCCc
Q psy16020        103 RESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus       103 ~~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t  134 (151)
                      .....+.|+++  +..+|++-...+.|..+|...
T Consensus        77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g  110 (267)
T 1npe_A           77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (267)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence            12468889987  457888998899999999864

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=93.64  E-value=1.1  Score=33.85  Aligned_cols=100  Identities=13%  Similarity=0.045  Sum_probs=61.9

Q ss_pred             EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCC-C
Q psy16020         28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPR-R  103 (151)
Q Consensus        28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~-~  103 (151)
                      +|++..+|.|..|+..  |.     ...+....  ..+..+++- +++||++..  +.|+.+|.+ ++...-...... .
T Consensus        60 ~~~d~~~~~i~~~~~~--g~-----~~~~~~~~--~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~  129 (305)
T 3dr2_A           60 VWSDLVGRRVLGWRED--GT-----VDVLLDAT--AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKR  129 (305)
T ss_dssp             EEEETTTTEEEEEETT--SC-----EEEEEESC--SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEE
T ss_pred             EEEECCCCEEEEEeCC--CC-----EEEEeCCC--CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCc
Confidence            6777778888888652  32     22333333  556777775 477998873  589999986 665433221111 1


Q ss_pred             CCceeEEEEeCCE-EEEEE----c-------------CCCeEEEEeCCccce
Q psy16020        104 ESQVRQMTWAGDG-VWVSI----R-------------LDSTLRMYNAHTYQH  137 (151)
Q Consensus       104 ~~~I~~m~~~~~~-vwis~----~-------------~d~~l~lwd~~t~~~  137 (151)
                      ...++.++++++| +|++-    .             ..+.|..||..+.+.
T Consensus       130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~  181 (305)
T 3dr2_A          130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL  181 (305)
T ss_dssp             CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred             cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence            2357788888665 58762    1             136788999866543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=93.57  E-value=1.6  Score=33.07  Aligned_cols=112  Identities=8%  Similarity=0.037  Sum_probs=65.6

Q ss_pred             ceeeeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------Ce
Q psy16020         17 TALPPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NK   82 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~n-------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n~   82 (151)
                      .-.+....++++|+-.+.       ..+.+|+... ..|..-.    ++.. ...-.+++..+++||+-.|       +.
T Consensus       140 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~  213 (315)
T 4asc_A          140 YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK-FEWKELA----PMQT-ARSLFGATVHDGRIIVAAGVTDTGLTSS  213 (315)
T ss_dssp             BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT-TEEEECC----CCSS-CCBSCEEEEETTEEEEEEEECSSSEEEE
T ss_pred             cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC-CeEEECC----CCCC-chhceEEEEECCEEEEEeccCCCCccce
Confidence            334455578888887754       3578887642 4563211    1111 1222456667889886543       36


Q ss_pred             EEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCccc
Q psy16020         83 IHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTYQ  136 (151)
Q Consensus        83 I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~~  136 (151)
                      ++++|+++.+-... ..-+ ....-..++..++.+++.++.+              +.+..||.++.+
T Consensus       214 ~~~yd~~~~~W~~~-~~~p-~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  279 (315)
T 4asc_A          214 AEVYSITDNKWAPF-EAFP-QERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK  279 (315)
T ss_dssp             EEEEETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred             EEEEECCCCeEEEC-CCCC-CcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence            99999998764332 2111 1123345566688888887764              347889988654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=93.47  E-value=1.9  Score=32.62  Aligned_cols=120  Identities=8%  Similarity=0.003  Sum_probs=75.4

Q ss_pred             CCCceeeeeeCCCceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe-
Q psy16020          4 PHPTPYPLNKILDTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY-   79 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~-~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~-   79 (151)
                      +..+.+.++..+.....+... ++++|++- .+|.|..|+..  +.    ....+..+   .....|++. +++||++. 
T Consensus        20 ~~~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g~----~~~~~~~~---~~p~gia~~~dG~l~vad~   90 (306)
T 2p4o_A           20 APAKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPD--GN----QQIHATVE---GKVSGLAFTSNGDLVATGW   90 (306)
T ss_dssp             CCEEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CC----EEEEEECS---SEEEEEEECTTSCEEEEEE
T ss_pred             CCceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCC--Cc----eEEEEeCC---CCceeEEEcCCCcEEEEec
Confidence            345566777666777788774 45788886 67888887643  31    11233443   345677775 46799987 


Q ss_pred             -CC--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEeCCc
Q psy16020         80 -KN--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus        80 -~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd~~t  134 (151)
                       .+  +|+.+|..+++++..... .. ......++.. +..++++-..++.|..+|..+
T Consensus        91 ~~~~~~v~~~d~~~g~~~~~~~~-~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~  147 (306)
T 2p4o_A           91 NADSIPVVSLVKSDGTVETLLTL-PD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ  147 (306)
T ss_dssp             CTTSCEEEEEECTTSCEEEEEEC-TT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred             cCCcceEEEEcCCCCeEEEEEeC-CC-ccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence             22  499999999987654442 21 1233444333 334577766788888888765

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=93.32  E-value=1.9  Score=32.22  Aligned_cols=118  Identities=10%  Similarity=0.072  Sum_probs=67.6

Q ss_pred             eeeeeeCCCceeeeEEeCCeEEEEec------CCcEEEEEcCCCCCCCCCcceEEEeCCCCCc--eEEEeeeCCEEEEEe
Q psy16020          8 PYPLNKILDTALPPVHVQGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRSLAAVYNKVWCGY   79 (151)
Q Consensus         8 ~l~~i~l~~~V~~i~~~~~~v~vgl~------nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~p--V~~m~~v~~~Lw~g~   79 (151)
                      .+..+..+-.-.+....++++|+-.+      ...+.+|+... +.|.       .+.....|  -.+++..+++||+-.
T Consensus       142 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~-------~~~~~p~~r~~~~~~~~~~~i~v~G  213 (301)
T 2vpj_A          142 MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT-GHWT-------NVTPMATKRSGAGVALLNDHIYVVG  213 (301)
T ss_dssp             EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEE-------EECCCSSCCBSCEEEEETTEEEEEC
T ss_pred             ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCC-CcEE-------eCCCCCcccccceEEEECCEEEEEe
Confidence            33333333333344455778887653      24577777642 4553       12221122  235666788988765


Q ss_pred             C-------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020         80 K-------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY  135 (151)
Q Consensus        80 ~-------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~  135 (151)
                      |       +.++++|+++.+-... ..-+. ...-..++..++.+++.++.+     ..+..||.++.
T Consensus       214 G~~~~~~~~~v~~yd~~~~~W~~~-~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          214 GFDGTAHLSSVEAYNIRTDSWTTV-TSMTT-PRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             CBCSSSBCCCEEEEETTTTEEEEE-CCCSS-CCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             CCCCCcccceEEEEeCCCCcEEEC-CCCCC-cccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            3       4699999998875433 21111 123345556688888887765     56889998764

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=93.30  E-value=3  Score=35.41  Aligned_cols=107  Identities=10%  Similarity=0.021  Sum_probs=65.6

Q ss_pred             eCCeEEEEec----CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CC--eEEEEeCCCCcEE
Q psy16020         24 VQGRVVCALA----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KN--KIHVVDPKSLVVL   94 (151)
Q Consensus        24 ~~~~v~vgl~----nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n--~I~vid~~t~~i~   94 (151)
                      .++++|+...    ++.|.+++....+   .+..+.+.-......+..+... +++|.+..  ++  +|+++|..+++..
T Consensus       296 dg~~l~~~s~~~~~~~~l~~~d~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~  372 (710)
T 2xdw_A          296 EGTVFTFKTNRHSPNYRLINIDFTDPE---ESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL  372 (710)
T ss_dssp             ETTEEEEEECTTCTTCEEEEEETTSCC---GGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             cCCEEEEEECCCCCCCEEEEEeCCCCC---cccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE
Confidence            4556665543    2357777654221   0011233222212368888887 67766655  23  6999999889888


Q ss_pred             EEEEecCCCCCceeEEEEeCC--EEEEEEc---CCCeEEEEeCCccc
Q psy16020         95 KSFDAHPRRESQVRQMTWAGD--GVWVSIR---LDSTLRMYNAHTYQ  136 (151)
Q Consensus        95 ~~~~~h~~~~~~I~~m~~~~~--~vwis~~---~d~~l~lwd~~t~~  136 (151)
                      +++..+.   ..|..+..+++  .++++.+   ..+.|.+||..+.+
T Consensus       373 ~~l~~~~---~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          373 KIFPLEV---GSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEECCCS---SEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EecCCCC---ceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            8887663   46777776543  4554444   45789999998866

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=93.27  E-value=0.38  Score=36.42  Aligned_cols=73  Identities=15%  Similarity=0.254  Sum_probs=47.3

Q ss_pred             ceEEEeee--CCEEEEEeC----C--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcC----------
Q psy16020         64 SVRSLAAV--YNKVWCGYK----N--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL----------  123 (151)
Q Consensus        64 pV~~m~~v--~~~Lw~g~~----n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~----------  123 (151)
                      .+.+..+.  ++.|..++.    +  .|+++|+++++..+-...+    . +..+.++++|  +.++..+          
T Consensus        60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~----~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~  134 (347)
T 2gop_A           60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK----N-IRSLEWNEDSRKLLIVGFKRREDEDFIFE  134 (347)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES----E-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred             cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC----C-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence            35555665  356665552    2  5999999998876655533    2 8888888665  3333222          


Q ss_pred             ----------------CCeEEEEeCCccceeeeE
Q psy16020        124 ----------------DSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus       124 ----------------d~~l~lwd~~t~~~l~~i  141 (151)
                                      ...|.+||..+.+.++.+
T Consensus       135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l  168 (347)
T 2gop_A          135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF  168 (347)
T ss_dssp             --CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred             cccceeecCcccccCccceEEEEECCCCeEEeee
Confidence                            367999999988764444

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=93.16  E-value=1.6  Score=35.10  Aligned_cols=126  Identities=13%  Similarity=0.095  Sum_probs=82.1

Q ss_pred             CCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEE-Ee--CCCCCceEEEeee-C----CE
Q psy16020          5 HPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TL--GLPHHSVRSLAAV-Y----NK   74 (151)
Q Consensus         5 ~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i-~l--~~~~~pV~~m~~v-~----~~   74 (151)
                      +.+.++++++++++--+...+  ++||+|-.+--|..|+-.+.+.   .....+ .+  +....-+.-|++. .    +.
T Consensus       169 ~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~---~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gy  245 (355)
T 3amr_A          169 SGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG---SNGTVIDRADGRHLTRDIEGLTIYYAADGKGY  245 (355)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSC---SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEE
T ss_pred             cceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCC---CCceEEEEecCCccccCcceEEEEecCCCCEE
Confidence            457789999999999888864  7999999986666665433221   122333 23  2233568888885 2    36


Q ss_pred             EEEEe-C-CeEEEEeCC-CCcEEEEEEecCCC-------CCc--eeEEEEe---CCEEEEEEcC---------CCeEEEE
Q psy16020         75 VWCGY-K-NKIHVVDPK-SLVVLKSFDAHPRR-------ESQ--VRQMTWA---GDGVWVSIRL---------DSTLRMY  130 (151)
Q Consensus        75 Lw~g~-~-n~I~vid~~-t~~i~~~~~~h~~~-------~~~--I~~m~~~---~~~vwis~~~---------d~~l~lw  130 (151)
                      |.++| | |+..|||.+ +.+...+|..-...       -..  |......   +.|++++-+.         ....++.
T Consensus       246 LivSsQG~~s~~Vydr~~~~~~vg~f~Ig~~~~idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg~n~~~~~~~~qnFk~v  325 (355)
T 3amr_A          246 LMASSQGNSSYAIYDRQGKNKYVADFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGENIDHGQKANQNFKIV  325 (355)
T ss_dssp             EEEEEGGGTEEEEEESSTTCCEEEEEEECCCSSSCCCCSCCCEEEECSCCSTTCTTCEEEEEESSCEETTEECCCEEEEE
T ss_pred             EEEEcCCCCEEEEEECCCCCcEEEEEEecCCCCceeeeccCcceEEccccCCCCCCcEEEEecCCcccCCCCcCceEEEE
Confidence            99999 3 589999997 89999999733221       012  2222221   4588888776         4566776


Q ss_pred             eCC
Q psy16020        131 NAH  133 (151)
Q Consensus       131 d~~  133 (151)
                      +.+
T Consensus       326 ~w~  328 (355)
T 3amr_A          326 PWE  328 (355)
T ss_dssp             EHH
T ss_pred             EHH
Confidence            654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=93.05  E-value=0.22  Score=38.32  Aligned_cols=67  Identities=10%  Similarity=-0.018  Sum_probs=46.7

Q ss_pred             CCEEEEEeC--C--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         72 YNKVWCGYK--N--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        72 ~~~Lw~g~~--n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++.|..++.  +  +|+++|+++++..+....+..   .+....++++|- .+..+.+..|++||..+.+.....
T Consensus        47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~---~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~  118 (388)
T 3pe7_A           47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD---NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY  118 (388)
T ss_dssp             SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence            456666653  3  599999999998777665543   333455776653 455666789999999998766544

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=93.03  E-value=2.1  Score=32.05  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=64.5

Q ss_pred             eeeeEEeCCeEEEEec----------CCcEEEEEcCCCCCCCCCcceEEEeCCCC--CceEEEeeeCCEEEEEeC-----
Q psy16020         18 ALPPVHVQGRVVCALA----------DGSVAIFRRGPDGQWDLSKYHTVTLGLPH--HSVRSLAAVYNKVWCGYK-----   80 (151)
Q Consensus        18 V~~i~~~~~~v~vgl~----------nG~l~v~~~~~~~~wd~~~~~~i~l~~~~--~pV~~m~~v~~~Lw~g~~-----   80 (151)
                      -.+....++++|+..+          ...+.+|+... ..|.       .+....  ..-.++...+++||+-.|     
T Consensus       142 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-~~W~-------~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~  213 (306)
T 3ii7_A          142 SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-ETWT-------ELCPMIEARKNHGLVFVKDKIFAVGGQNGLG  213 (306)
T ss_dssp             SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT-TEEE-------EECCCSSCCBSCEEEEETTEEEEECCEETTE
T ss_pred             eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC-CeEE-------ECCCccchhhcceEEEECCEEEEEeCCCCCC
Confidence            3344556788888664          34577777643 3453       122211  222356667889887654     


Q ss_pred             --CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCcc
Q psy16020         81 --NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY  135 (151)
Q Consensus        81 --n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~  135 (151)
                        +.++++|+++.+-... ..-+. ...-..++..++.+++.++.+     ..+..||..+.
T Consensus       214 ~~~~~~~yd~~~~~W~~~-~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          214 GLDNVEYYDIKLNEWKMV-SPMPW-KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             EBCCEEEEETTTTEEEEC-CCCSC-CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             CCceEEEeeCCCCcEEEC-CCCCC-CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence              5699999998764322 21111 122344555588899888853     67899998874

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=93.00  E-value=2.4  Score=32.49  Aligned_cols=118  Identities=9%  Similarity=-0.029  Sum_probs=75.2

Q ss_pred             ceeeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020         17 TALPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP   88 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~   88 (151)
                      ....|...  ++++|++-..  +.|..++.+  |.    ..+.+--..- .--+.|++-  +++||.+..  ++|+++|.
T Consensus       121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~----~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~~~I~~~d~  193 (316)
T 1ijq_A          121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GV----DIYSLVTENI-QWPNGITLDLLSGRLYWVDSKLHSISSIDV  193 (316)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SC----CEEEEECSSC-SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CC----CeEEEEECCC-CCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence            44566654  5678887643  667777643  32    2222211111 223566665  578988874  58999998


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.... +.+............|+..++.+|++-...+.|..+|..+++.+..|.
T Consensus       194 dg~~~-~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          194 NGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             TSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             CCCce-EEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence            75333 334322222345778888899998899999999999998887777663

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=92.90  E-value=2.3  Score=32.07  Aligned_cols=110  Identities=9%  Similarity=0.059  Sum_probs=64.5

Q ss_pred             eeeEEeCCeEEEEecC------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------CeEEE
Q psy16020         19 LPPVHVQGRVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NKIHV   85 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~n------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n~I~v   85 (151)
                      .+....++++|+-.+.      ..+.+|+.. ...|..-.    .+.. ...-.++...+++||+-.|       +.+++
T Consensus       162 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~  235 (308)
T 1zgk_A          162 VGVAVLNRLLYAVGGFDGTNRLNSAECYYPE-RNEWRMIT----AMNT-IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER  235 (308)
T ss_dssp             CEEEEETTEEEEECCBCSSCBCCCEEEEETT-TTEEEECC----CCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEE
T ss_pred             eEEEEECCEEEEEeCCCCCCcCceEEEEeCC-CCeEeeCC----CCCC-ccccceEEEECCEEEEEeCCCCCCccceEEE
Confidence            3444557888876542      357788764 34563211    1111 1222456667899887653       56999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC-----CCeEEEEeCCccc
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQ  136 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~-----d~~l~lwd~~t~~  136 (151)
                      +|+++.+-...-. -+ ....-..++..++.+++.++.     ...+.+||.++.+
T Consensus       236 yd~~~~~W~~~~~-~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          236 YDVETETWTFVAP-MK-HRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             EETTTTEEEECCC-CS-SCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             EeCCCCcEEECCC-CC-CCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence            9999876443211 11 112334556668888888764     3568899988643

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=92.86  E-value=2.3  Score=31.85  Aligned_cols=109  Identities=13%  Similarity=0.116  Sum_probs=64.6

Q ss_pred             eeeeEEeCCeEEEEec--------CCcEEEEEcCCCCCCCCCcceEEEeCCC--CCceEEEeeeCCEEEEEeC-------
Q psy16020         18 ALPPVHVQGRVVCALA--------DGSVAIFRRGPDGQWDLSKYHTVTLGLP--HHSVRSLAAVYNKVWCGYK-------   80 (151)
Q Consensus        18 V~~i~~~~~~v~vgl~--------nG~l~v~~~~~~~~wd~~~~~~i~l~~~--~~pV~~m~~v~~~Lw~g~~-------   80 (151)
                      -.+....++++|+..+        ...+.+|+.. .+.|..       +...  ...-.++...+++||+-.|       
T Consensus       148 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~~-------~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~  219 (302)
T 2xn4_A          148 SVGVGVVGGLLYAVGGYDVASRQCLSTVECYNAT-TNEWTY-------IAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVR  219 (302)
T ss_dssp             SCEEEEETTEEEEECCEETTTTEECCCEEEEETT-TTEEEE-------ECCCSSCCBSCEEEEETTEEEEECCBSSSSBC
T ss_pred             CceEEEECCEEEEEeCCCCCCCccccEEEEEeCC-CCcEEE-------CCCCccccccccEEEECCEEEEECCCCCCccc
Confidence            3445556788888653        2357777763 344532       1211  1222356667899887653       


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ  136 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~  136 (151)
                      +.++++|+++.+-..- ...+. ...-..++..++.+++.++.+     ..+.+||.++.+
T Consensus       220 ~~~~~yd~~~~~W~~~-~~~~~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          220 KSVEVYDPTTNAWRQV-ADMNM-CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             CCEEEEETTTTEEEEE-CCCSS-CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             ceEEEEeCCCCCEeeC-CCCCC-ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence            4699999998764432 22211 122344556688888887754     358999998643

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=92.71  E-value=2.5  Score=31.98  Aligned_cols=109  Identities=13%  Similarity=0.158  Sum_probs=63.6

Q ss_pred             eeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------CeEEE
Q psy16020         20 PPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NKIHV   85 (151)
Q Consensus        20 ~i~~~~~~v~vgl~n-------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n~I~v   85 (151)
                      +....++++|+-.+.       ..+.+|+... ..|..-.    .+.. ...-.+++..+++||+-.|       +.+++
T Consensus       153 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~  226 (318)
T 2woz_A          153 NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKK-GDWKDLA----PMKT-PRSMFGVAIHKGKIVIAGGVTEDGLSASVEA  226 (318)
T ss_dssp             EEEEETTEEEEECCEESSSCBCCCEEEEETTT-TEEEEEC----CCSS-CCBSCEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred             EEEEECCEEEEEcCCCCCCCccceEEEEcCCC-CEEEECC----CCCC-CcccceEEEECCEEEEEcCcCCCCccceEEE
Confidence            344467888876542       2477887643 4463211    1111 1222366677899886543       46899


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC--------------CeEEEEeCCccc
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD--------------STLRMYNAHTYQ  136 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d--------------~~l~lwd~~t~~  136 (151)
                      +|+++.+-... ..-+. ...-+.++..++.+++.++.+              ..+..||..+.+
T Consensus       227 yd~~~~~W~~~-~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  289 (318)
T 2woz_A          227 FDLKTNKWEVM-TEFPQ-ERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE  289 (318)
T ss_dssp             EETTTCCEEEC-CCCSS-CCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred             EECCCCeEEEC-CCCCC-cccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence            99998764332 21111 123345666788888877653              458889988744

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=92.69  E-value=2.5  Score=31.90  Aligned_cols=110  Identities=9%  Similarity=0.099  Sum_probs=64.1

Q ss_pred             eeeEEeCCeEEEEecC----------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-------C
Q psy16020         19 LPPVHVQGRVVCALAD----------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------N   81 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~n----------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-------n   81 (151)
                      .++...++++|+-.+.          ..+.+|+... ..|..-.    ++..+ ..-.++...+++||+-.|       +
T Consensus        64 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~-~~W~~~~----~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~  137 (308)
T 1zgk_A           64 LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT-NQWSPCA----PMSVP-RNRIGVGVIDGHIYAVGGSHGCIHHN  137 (308)
T ss_dssp             CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTT-TEEEECC----CCSSC-CBTCEEEEETTEEEEECCEETTEECC
T ss_pred             ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCC-CeEeECC----CCCcC-ccccEEEEECCEEEEEcCCCCCcccc
Confidence            3445567888876653          3577777542 3453211    11111 222455667899887654       5


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ  136 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~  136 (151)
                      .++++|+++.+-.+.-.. + ....-+.++..++.+++.++.+     ..+..||..+.+
T Consensus       138 ~~~~yd~~~~~W~~~~~~-p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  195 (308)
T 1zgk_A          138 SVERYEPERDEWHLVAPM-L-TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE  195 (308)
T ss_dssp             CEEEEETTTTEEEECCCC-S-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred             cEEEECCCCCeEeECCCC-C-ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence            799999998764432111 1 1123345555688888887654     568889887643

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=92.48  E-value=4.4  Score=34.29  Aligned_cols=78  Identities=13%  Similarity=0.130  Sum_probs=51.3

Q ss_pred             ceEEEeeeCCEEEEEeC-----CeEEEEeCCCCcE--EEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC-cc
Q psy16020         64 SVRSLAAVYNKVWCGYK-----NKIHVVDPKSLVV--LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH-TY  135 (151)
Q Consensus        64 pV~~m~~v~~~Lw~g~~-----n~I~vid~~t~~i--~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~-t~  135 (151)
                      .+......++.+++.+.     .+|+++|.++++.  .+.+..|. ....|..+..+++.+.++.++++..+||... +.
T Consensus       273 ~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g  351 (695)
T 2bkl_A          273 AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG  351 (695)
T ss_dssp             CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred             ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence            33343334544777663     4899999988763  23444442 1346888888888899999999998888654 35


Q ss_pred             ceeeeEe
Q psy16020        136 QHLQDVD  142 (151)
Q Consensus       136 ~~l~~id  142 (151)
                      +.++.+.
T Consensus       352 ~~~~~l~  358 (695)
T 2bkl_A          352 KPVRTVQ  358 (695)
T ss_dssp             CEEEECC
T ss_pred             CeeEEec
Confidence            5555553

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=92.39  E-value=6.6  Score=36.13  Aligned_cols=136  Identities=8%  Similarity=0.086  Sum_probs=83.6

Q ss_pred             ceeeeeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--C-eE
Q psy16020          7 TPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--N-KI   83 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--n-~I   83 (151)
                      +.+++-.++++|++|...++++.+|. +.+|.+|++..+..  +.  ....... .--+..+...++.+.+|.-  + .+
T Consensus       877 ~lv~~~~v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~~~--L~--~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~  950 (1158)
T 3ei3_A          877 QTVAEKEVKGAVYSMVEFNGKLLASI-NSTVRLYEWTTEKE--LR--TECNHYN-NIMALYLKTKGDFILVGDLMRSVLL  950 (1158)
T ss_dssp             EEEEEEEESSCEEEEEEETTEEEEEE-TTEEEEEEECTTSC--EE--EEEEECC-CSCEEEEEEETTEEEEEESSBCEEE
T ss_pred             EEEEEEEcCCcCEEEeeeCCEEEEEc-CCEEEEEECCCCce--EE--EEeeccc-cEEEEEEeccCCEEEEEEhhheEEE
Confidence            34566678899999999999999998 68999999864321  11  0111111 1112355556889998883  3 45


Q ss_pred             EEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC----------ccceeeeEeCCcccccc
Q psy16020         84 HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH----------TYQHLQDVDIEPYVSKM  150 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~----------t~~~l~~idi~~~v~~~  150 (151)
                      ..|+.+..+.+- +.-+.. ...+++.....+.-++.+++++.|.+....          ..+...++.+-..+++|
T Consensus       951 ~~y~~~~~~L~~-~a~D~~-~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~ 1025 (1158)
T 3ei3_A          951 LAYKPMEGNFEE-IARDFN-PNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVF 1025 (1158)
T ss_dssp             EEEETTTTEEEE-EEECCS-CBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEE
T ss_pred             EEEEcCCCeEEE-EEeecc-cccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeE
Confidence            556666554332 222222 235777777656668888888888877432          23445555555555543

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=91.78  E-value=3.4  Score=31.44  Aligned_cols=52  Identities=13%  Similarity=0.079  Sum_probs=36.8

Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEE-EcC------CCeEEEEeCCccc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVS-IRL------DSTLRMYNAHTYQ  136 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis-~~~------d~~l~lwd~~t~~  136 (151)
                      +.|+++|+++++...-.. +.   ..+..+.+++ +|-++. .+.      ...|.++|..+.+
T Consensus       168 ~~l~~~d~~~g~~~~l~~-~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~  227 (388)
T 3pe7_A          168 CRLMRVDLKTGESTVILQ-EN---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN  227 (388)
T ss_dssp             EEEEEEETTTCCEEEEEE-ES---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred             ceEEEEECCCCceEEeec-CC---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence            579999999998765554 43   3688999998 776443 332      3478888877543

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=91.60  E-value=5.4  Score=33.37  Aligned_cols=104  Identities=13%  Similarity=0.108  Sum_probs=66.7

Q ss_pred             CCeEEEEecCC-------cEEEEEcCCCCCCCC-CcceEEEeCCCCCceEEEeee--CCEEEEEe-C-CeEEEEeCC---
Q psy16020         25 QGRVVCALADG-------SVAIFRRGPDGQWDL-SKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-K-NKIHVVDPK---   89 (151)
Q Consensus        25 ~~~v~vgl~nG-------~l~v~~~~~~~~wd~-~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~-n~I~vid~~---   89 (151)
                      .+++|++--++       .+.++++..+|.|.- .....+.-+.  +|. .+++.  ++.||++. + ++|+.+|++   
T Consensus       204 G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~-giavdp~~g~LYvtd~~~g~V~r~d~~~~~  280 (496)
T 3kya_A          204 AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK--QCN-GATIHPINGELYFNSYEKGQVFRLDLVDYF  280 (496)
T ss_dssp             TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES--CCC-CEEECTTTCCEEEEETTTTEEEEECHHHHH
T ss_pred             CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC--Cce-EEEEcCCCCeEEEEECCCCEEEEEeccccc
Confidence            34699998766       277888777777742 1113444333  454 45554  46799887 3 589999998   


Q ss_pred             ----CCcE-----------EEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeC
Q psy16020         90 ----SLVV-----------LKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA  132 (151)
Q Consensus        90 ----t~~i-----------~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~  132 (151)
                          ++++           .+.+-...+ ...-+.|+++++|  ++++-.....|+.+|.
T Consensus       281 ~~~~tg~~~tp~~~~~~g~~~~l~~~~~-~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~  339 (496)
T 3kya_A          281 KTIKNGGSWDPIVKNNPNTFKQLFTIAD-PSWEFQIFIHPTGKYAYFGVINNHYFMRSDY  339 (496)
T ss_dssp             HHHHTTCCCCCBGGGCTTTEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             ccccCceeecccccccccccceeEecCC-CCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence                6665           233322221 2346788888665  7999999999999554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=91.46  E-value=4.3  Score=32.06  Aligned_cols=116  Identities=9%  Similarity=-0.039  Sum_probs=73.1

Q ss_pred             ceeeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020         17 TALPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP   88 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~   88 (151)
                      ....|...  ++++|++-..  +.|..++.  +|.    ....+--..- .--+.|++-  +++||.+-.  ++|+.+|.
T Consensus       203 ~P~giavdp~~g~ly~td~~~~~~I~r~~~--dG~----~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~~~~I~~~d~  275 (386)
T 3v65_B          203 KPRAIALHPMEGTIYWTDWGNTPRIEASSM--DGS----GRRIIADTHL-FWPNGLTIDYAGRRMYWVDAKHHVIERANL  275 (386)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEET--TSC----SCEEEECSSC-SCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred             CCcEEEEEcCCCeEEEeccCCCCEEEEEeC--CCC----CcEEEEECCC-CCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence            34555554  5678877643  45655554  332    2222211111 223566764  688988873  58999998


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.... +.+...  .......|++.++.+|++-.....|..+|..+++..+.|.
T Consensus       276 dG~~~-~~~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          276 DGSHR-KAVISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             TSCSC-EEEECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CCCee-EEEEEC--CCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence            75333 333321  1346788888899999999999999999988887777774

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=91.43  E-value=2.4  Score=33.31  Aligned_cols=97  Identities=10%  Similarity=0.084  Sum_probs=55.6

Q ss_pred             CCeEEEEecCCcEEEEEcCCC-CCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEeCC-----eEEEEeCCCCcEEE
Q psy16020         25 QGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKN-----KIHVVDPKSLVVLK   95 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~-~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~~n-----~I~vid~~t~~i~~   95 (151)
                      ++.||+|..+| |.+++.... ..|....   ..+..  ..|++|++-   ++.||+|...     .|+..+ +.++--+
T Consensus        22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~---~~~~~--~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~   94 (394)
T 3b7f_A           22 PVMLLVATIKG-AWFLASDPARRTWELRG---PVFLG--HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWT   94 (394)
T ss_dssp             CCEEEEEETTE-EEEEEECTTSCSEEEEE---EESTT--SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCE
T ss_pred             CCEEEEEecCc-eEEEECCCCCCCceECC---ccCCC--CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCce
Confidence            56899999887 777765432 3674211   12333  789999985   5789999843     576653 3333222


Q ss_pred             EEEec---C-C-------CCCceeEEEEe----CCEEEEEEcCCCeEE
Q psy16020         96 SFDAH---P-R-------RESQVRQMTWA----GDGVWVSIRLDSTLR  128 (151)
Q Consensus        96 ~~~~h---~-~-------~~~~I~~m~~~----~~~vwis~~~d~~l~  128 (151)
                      .+...   . .       ....|..|...    ++.+|+.....+..+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~  142 (394)
T 3b7f_A           95 EATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFR  142 (394)
T ss_dssp             ECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEE
T ss_pred             ECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEE
Confidence            22211   0 0       01257778776    456677665544443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=91.17  E-value=5.7  Score=32.89  Aligned_cols=69  Identities=14%  Similarity=0.034  Sum_probs=43.3

Q ss_pred             eEEEeee-CCEEEE-EeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEE-EEeCCEEEEEE-cCCC--eEEEEeCCccc
Q psy16020         65 VRSLAAV-YNKVWC-GYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQM-TWAGDGVWVSI-RLDS--TLRMYNAHTYQ  136 (151)
Q Consensus        65 V~~m~~v-~~~Lw~-g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m-~~~~~~vwis~-~~d~--~l~lwd~~t~~  136 (151)
                      ++++.+. ++++++ +..  .+|+++|.++++ .+++..|.   ..+..+ ..+++.++++. +.+.  .|.++|..+.+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~  371 (662)
T 3azo_A          296 MRWFAPLANGLIAVVHGKGAAVLGILDPESGE-LVDAAGPW---TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR  371 (662)
T ss_dssp             CCSEEECTTSCEEEEEBSSSCEEEEEETTTTE-EEECCSSC---CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             CceEeEeCCCEEEEEEEcCccEEEEEECCCCc-EEEecCCC---CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            5566665 455444 432  468888998887 46676664   367777 77788875444 4443  56666766655


Q ss_pred             e
Q psy16020        137 H  137 (151)
Q Consensus       137 ~  137 (151)
                      .
T Consensus       372 ~  372 (662)
T 3azo_A          372 A  372 (662)
T ss_dssp             E
T ss_pred             e
Confidence            4

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=90.67  E-value=1.7  Score=33.44  Aligned_cols=111  Identities=12%  Similarity=0.047  Sum_probs=64.4

Q ss_pred             CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC--CCCCceEEEeee-CCEEEEEeC-CeEEEEeCCC
Q psy16020         16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG--LPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~--~~~~pV~~m~~v-~~~Lw~g~~-n~I~vid~~t   90 (151)
                      ..+..+.+. ++++|++..+|.+...+.+.+..|..-     ...  .....+.++.+. ++++|++.. +.|+ ...+.
T Consensus       205 ~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~Dg  278 (327)
T 2xbg_A          205 RRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGEL-----LSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDG  278 (327)
T ss_dssp             SCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCC-----BCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESST
T ss_pred             CccceeEECCCCCEEEEeCCceEEEecCCCCCeeEec-----cCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCCC
Confidence            456666653 567998888888665432334456421     111  011457788776 467888764 4564 34555


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeC
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA  132 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~  132 (151)
                      ++.-..+.........+..+.+.+++.++..+.++.|.-++-
T Consensus       279 G~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          279 GQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT  320 (327)
T ss_dssp             TSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred             CcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence            655444442211123577777765555667788888776654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=90.29  E-value=4.5  Score=30.17  Aligned_cols=108  Identities=11%  Similarity=0.111  Sum_probs=63.5

Q ss_pred             eeeEEeCCeEEEEec-CC-----cEEEEEcCCCCCCCCCcceEEEeCCCC--CceEEEeeeCCEEEEEeC---------C
Q psy16020         19 LPPVHVQGRVVCALA-DG-----SVAIFRRGPDGQWDLSKYHTVTLGLPH--HSVRSLAAVYNKVWCGYK---------N   81 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~-nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~--~pV~~m~~v~~~Lw~g~~---------n   81 (151)
                      .+....++++|+-.+ ++     ++-+|+.. ...|.       .+....  ..-.+++..+++||+-.|         +
T Consensus       102 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W~-------~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~  173 (302)
T 2xn4_A          102 LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIK-SNEWF-------HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS  173 (302)
T ss_dssp             CEEEEETTEEEEEEEECSSCEEEEEEEEETT-TTEEE-------EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred             eEEEEECCEEEEEcCCCCCccCceEEEEeCC-CCeEe-------ecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence            445556778777543 22     46677653 23453       122211  222355667899887543         4


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ  136 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~  136 (151)
                      .++++|+++.+-...-. -+ ....-+.++..++.+++.++.+     ..+..||..+.+
T Consensus       174 ~~~~yd~~~~~W~~~~~-~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          174 TVECYNATTNEWTYIAE-MS-TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             CEEEEETTTTEEEEECC-CS-SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred             EEEEEeCCCCcEEECCC-Cc-cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence            59999999876543311 11 1223456666788888887764     468899988643

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=89.87  E-value=5  Score=30.17  Aligned_cols=109  Identities=16%  Similarity=0.120  Sum_probs=64.2

Q ss_pred             eeeEEeCCeEEEEec----C-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--------C
Q psy16020         19 LPPVHVQGRVVCALA----D-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--------N   81 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~----n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--------n   81 (151)
                      .++...++++|+..+    +     .++-+|+... +.|..-.    ++.. ...-.+++..+++||+-.|        +
T Consensus        92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~~~----~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~  165 (315)
T 4asc_A           92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS-FKWGESD----PLPY-VVYGHTVLSHMDLVYVIGGKGSDRKCLN  165 (315)
T ss_dssp             CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTT-TEEEECC----CCSS-CCBSCEEEEETTEEEEECCBCTTSCBCC
T ss_pred             eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCC-CcEeECC----CCCC-cccceeEEEECCEEEEEeCCCCCCcccc
Confidence            344556888888766    1     2477777642 3463211    1111 1222355667889886553        4


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCC-----eEEEEeCCcc
Q psy16020         82 KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS-----TLRMYNAHTY  135 (151)
Q Consensus        82 ~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~-----~l~lwd~~t~  135 (151)
                      .++++|+++.+-.+. ..-+ ....-+.++..++.+++.++.+.     .+..||..+.
T Consensus       166 ~~~~yd~~~~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          166 KMCVYDPKKFEWKEL-APMQ-TARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             CEEEEETTTTEEEEC-CCCS-SCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             eEEEEeCCCCeEEEC-CCCC-CchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence            699999998764332 2111 12234556666888888887644     5888998864

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=89.82  E-value=5.3  Score=30.30  Aligned_cols=71  Identities=11%  Similarity=0.154  Sum_probs=52.8

Q ss_pred             CceEEEeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         63 HSVRSLAAV--YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                      .-+..|++.  +++||+..+  +.|+.+|+. +++++++....  ..-...+++.+++ +|++..++..+.+++..+..
T Consensus        27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g--~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~  102 (255)
T 3qqz_A           27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF--VKDLETIEYIGDNQFVISDERDYAIYVISLTPNS  102 (255)
T ss_dssp             SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS--CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred             cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC--CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence            458888887  478998663  589999998 99999986432  1245666666554 47888889999999876543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=89.65  E-value=2.3  Score=33.87  Aligned_cols=74  Identities=15%  Similarity=0.223  Sum_probs=53.1

Q ss_pred             CCEEEEEe--CCeEEEEeCCCCcEEEEEEec----CCCCCceeEEEE---eCC-EEEEEEc-------------CCCeEE
Q psy16020         72 YNKVWCGY--KNKIHVVDPKSLVVLKSFDAH----PRRESQVRQMTW---AGD-GVWVSIR-------------LDSTLR  128 (151)
Q Consensus        72 ~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h----~~~~~~I~~m~~---~~~-~vwis~~-------------~d~~l~  128 (151)
                      ++++|+++  .++|+++|+.++..+...-..    -+....+..|.+   .+. .+|+...             .++.|.
T Consensus        24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~  103 (334)
T 2p9w_A           24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH  103 (334)
T ss_dssp             TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred             CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence            48999999  579999999877655442212    122345788888   444 4687544             278899


Q ss_pred             EEeCC---ccceeeeEeCCc
Q psy16020        129 MYNAH---TYQHLQDVDIEP  145 (151)
Q Consensus       129 lwd~~---t~~~l~~idi~~  145 (151)
                      .||..   |.+.+..+|+++
T Consensus       104 ~~Dl~~~~tg~~~~~~dL~~  123 (334)
T 2p9w_A          104 SFNLPLSENSKPVWSVNFEK  123 (334)
T ss_dssp             EEESSCCTTCCCSEEEESHH
T ss_pred             EEcCCcCCCCCEEEEecCcc
Confidence            99999   999999888754

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=89.63  E-value=5.7  Score=33.60  Aligned_cols=72  Identities=11%  Similarity=0.064  Sum_probs=45.6

Q ss_pred             CCceEEEeeeCCEEEEEe--CC--eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEc---CCCeEEEEeC
Q psy16020         62 HHSVRSLAAVYNKVWCGY--KN--KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIR---LDSTLRMYNA  132 (151)
Q Consensus        62 ~~pV~~m~~v~~~Lw~g~--~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~---~d~~l~lwd~  132 (151)
                      ...+..+.+.+++|.+..  ++  +|+++|.. ++..+++..+.  ...|..+..++  ..++++.+   ..+.|++||.
T Consensus       319 ~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~  395 (695)
T 2bkl_A          319 SASLLSVSIVGGHLSLEYLKDATSEVRVATLK-GKPVRTVQLPG--VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV  395 (695)
T ss_dssp             SCEEEEEEEETTEEEEEEEETTEEEEEEEETT-CCEEEECCCSS--SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred             CCeEEEEEEECCEEEEEEEECCEEEEEEEeCC-CCeeEEecCCC--CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence            367888888888877665  23  68888864 55556665442  23555555443  34554443   4578999999


Q ss_pred             Cccc
Q psy16020        133 HTYQ  136 (151)
Q Consensus       133 ~t~~  136 (151)
                      .+.+
T Consensus       396 ~~g~  399 (695)
T 2bkl_A          396 STGK  399 (695)
T ss_dssp             TTCC
T ss_pred             CCCc
Confidence            8765

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=89.60  E-value=5.7  Score=30.43  Aligned_cols=111  Identities=10%  Similarity=0.054  Sum_probs=62.2

Q ss_pred             CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCcE
Q psy16020         16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVV   93 (151)
Q Consensus        16 ~~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i   93 (151)
                      ..+.+|.+. ++.+|++..+|.|. .+.+.+.+|.....   ....+..+++.|.+.++++|++.. +.|+. ..+.++-
T Consensus        36 ~~~~~v~~~~~~~~~~~G~~g~i~-~s~DgG~tW~~~~~---~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~t  110 (327)
T 2xbg_A           36 ATILDMSFIDRHHGWLVGVNATLM-ETRDGGQTWEPRTL---VLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQS  110 (327)
T ss_dssp             SCEEEEEESSSSCEEEEETTTEEE-EESSTTSSCEECCC---CCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSS
T ss_pred             CcEEEEEECCCCcEEEEcCCCeEE-EeCCCCCCCeECCC---CCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCC
Confidence            578888875 45788888888652 23333446743211   112224689999998889997653 45654 3444554


Q ss_pred             EEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCeEEEEe
Q psy16020         94 LKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYN  131 (151)
Q Consensus        94 ~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~l~lwd  131 (151)
                      -+....-..-...+..+... +..+|+...+....+-.|
T Consensus       111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~D  149 (327)
T 2xbg_A          111 WSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKD  149 (327)
T ss_dssp             CEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESS
T ss_pred             ceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcC
Confidence            33332211101245666654 455677666555555555

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=89.43  E-value=5.5  Score=29.99  Aligned_cols=108  Identities=8%  Similarity=0.124  Sum_probs=62.1

Q ss_pred             eeeEEeCCeEEEEecC--------CcEEEEEcCCCCCCCCCcceEEEeCCCCCc--eEEEeeeCCEEEEEeC--------
Q psy16020         19 LPPVHVQGRVVCALAD--------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRSLAAVYNKVWCGYK--------   80 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~n--------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~p--V~~m~~v~~~Lw~g~~--------   80 (151)
                      .+....++++|+..+.        ..+-+|+.. ...|.       .+.....|  -.+++..+++||+-.|        
T Consensus       103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~-------~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  174 (318)
T 2woz_A          103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV-AAKWS-------EVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCT  174 (318)
T ss_dssp             CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT-TTEEE-------EECCCSSCEESCEEEEETTEEEEECCEESSSCBC
T ss_pred             cceEEECCEEEEEcCccCCCCcccceEEEEeCC-CCCEe-------ECCCCCCcccccEEEEECCEEEEEcCCCCCCCcc
Confidence            4455567887776542        136667653 24453       12221122  2345557899887543        


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC-----CeEEEEeCCccc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ  136 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d-----~~l~lwd~~t~~  136 (151)
                      +.++++|+++.+-.+. ..-+ ....-+.++..++.+++.++.+     ..+..||..+.+
T Consensus       175 ~~~~~yd~~~~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          175 NRVFIYNPKKGDWKDL-APMK-TPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             CCEEEEETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             ceEEEEcCCCCEEEEC-CCCC-CCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            3599999998764332 2111 1123455666788888887643     457788887643

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=89.36  E-value=5.7  Score=30.04  Aligned_cols=68  Identities=16%  Similarity=0.074  Sum_probs=40.7

Q ss_pred             ceEEEeeeC--CEEEEE-eC-----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC-CEEEEEE-c-----------
Q psy16020         64 SVRSLAAVY--NKVWCG-YK-----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG-DGVWVSI-R-----------  122 (151)
Q Consensus        64 pV~~m~~v~--~~Lw~g-~~-----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~-~~vwis~-~-----------  122 (151)
                      .+..+.+..  +.|+.+ ..     +.|++||.++++...... ..    ... ..+++ +|-++.. +           
T Consensus       239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~  312 (396)
T 3c5m_A          239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP----PCS-HLMSNFDGSLMVGDGCDAPVDVADAD  312 (396)
T ss_dssp             EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC----SEE-EEEECSSSSEEEEEECCC--------
T ss_pred             cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC----CCC-CCccCCCCceEEEecCCcceeecccc
Confidence            466667753  445544 32     339999999988655433 21    122 55655 4433332 1           


Q ss_pred             -----CCCeEEEEeCCccce
Q psy16020        123 -----LDSTLRMYNAHTYQH  137 (151)
Q Consensus       123 -----~d~~l~lwd~~t~~~  137 (151)
                           .+..|++||..+.+.
T Consensus       313 ~~~~~~~~~i~~~d~~~~~~  332 (396)
T 3c5m_A          313 SYNIENDPFLYVLNTKAKSA  332 (396)
T ss_dssp             --CCCCCCEEEEEETTTTBC
T ss_pred             ccccCCCCcEEEEecccCce
Confidence                 457899999987654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=88.83  E-value=1.7  Score=34.62  Aligned_cols=118  Identities=14%  Similarity=0.128  Sum_probs=74.6

Q ss_pred             eeeeCCC---ceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEe------CCCCCceEEEee----eCC
Q psy16020         10 PLNKILD---TALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL------GLPHHSVRSLAA----VYN   73 (151)
Q Consensus        10 ~~i~l~~---~V~~i~~~~--~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l------~~~~~pV~~m~~----v~~   73 (151)
                      +.|.++.   -.-++.+.+  +++|++. .+|+|.+|+...+.      ...+.+      |++......|..    -++
T Consensus         4 ~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~------~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g   77 (334)
T 2p9w_A            4 DQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS------HFNVVIDGASSNGDGEQQMSGLSLLTHDNSK   77 (334)
T ss_dssp             SEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC------EEEECCTTTCCSSCCSEEEEEEEESSSSSCC
T ss_pred             ceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe------EEEEecCCccccCCCcceeeEEEEeccCCCC
Confidence            3455552   456778875  7888887 68999999764211      112222      221122356666    357


Q ss_pred             EEEEEeC---------------CeEEEEeCC---CCcEEEEEEe--cCC--------CCCceeEEEEeCCE-EEEEEcCC
Q psy16020         74 KVWCGYK---------------NKIHVVDPK---SLVVLKSFDA--HPR--------RESQVRQMTWAGDG-VWVSIRLD  124 (151)
Q Consensus        74 ~Lw~g~~---------------n~I~vid~~---t~~i~~~~~~--h~~--------~~~~I~~m~~~~~~-vwis~~~d  124 (151)
                      +||+...               +.++.+|+.   |++......-  ..+        .....+.|+.+.+| ++++.+..
T Consensus        78 rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~  157 (334)
T 2p9w_A           78 RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG  157 (334)
T ss_dssp             EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred             cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence            8998432               569999999   8887666552  111        11248889998664 48888888


Q ss_pred             -CeEEEEeCC
Q psy16020        125 -STLRMYNAH  133 (151)
Q Consensus       125 -~~l~lwd~~  133 (151)
                       +.|...+..
T Consensus       158 ~~~I~rV~pd  167 (334)
T 2p9w_A          158 MPAIARVSAD  167 (334)
T ss_dssp             SCEEEEECTT
T ss_pred             CCeEEEEeCC
Confidence             888888776

>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1

Probab=88.62  E-value=1.8  Score=36.20  Aligned_cols=59  Identities=10%  Similarity=0.169  Sum_probs=38.6

Q ss_pred             EEEEecCCcEEEEEcCCCCCCC---CCcceEEEeCCCCCceEEEeeeC--CEEEEEeCCeEEEE
Q psy16020         28 VVCALADGSVAIFRRGPDGQWD---LSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVV   86 (151)
Q Consensus        28 v~vgl~nG~l~v~~~~~~~~wd---~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~n~I~vi   86 (151)
                      +|+|+.+|.|.-.-....+.++   .-....+++....+||+.|.+..  +.||++++++|.=+
T Consensus       424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v  487 (495)
T 1q47_A          424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL  487 (495)
T ss_dssp             EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred             EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence            9999999998776554333331   11234556654458999999864  68999999887654

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=88.41  E-value=11  Score=31.91  Aligned_cols=118  Identities=9%  Similarity=-0.010  Sum_probs=64.4

Q ss_pred             eCCCceeeeEEe--CCeEEEEecC----------C--cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee-eCCEEEE
Q psy16020         13 KILDTALPPVHV--QGRVVCALAD----------G--SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWC   77 (151)
Q Consensus        13 ~l~~~V~~i~~~--~~~v~vgl~n----------G--~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~-v~~~Lw~   77 (151)
                      .+|..-......  ++++|+..+.          +  .+.+|+.. .+.|..  ...+.... ..-..+.++ .+++||+
T Consensus       183 ~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~--~~~~~~~~-~~~~~~~~~~~~g~lyv  258 (656)
T 1k3i_A          183 DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSD--RTVTVTKH-DMFCPGISMDGNGQIVV  258 (656)
T ss_dssp             ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCC--CEEEECSC-CCSSCEEEECTTSCEEE
T ss_pred             cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEe--CcccCCCC-CCccccccCCCCCCEEE
Confidence            355433344444  7788876532          1  46666653 356742  12222221 112223443 4688887


Q ss_pred             EeC---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEe-CCEEEEEEc-CC-----CeEEEEeCCccc
Q psy16020         78 GYK---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWA-GDGVWVSIR-LD-----STLRMYNAHTYQ  136 (151)
Q Consensus        78 g~~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~-~d-----~~l~lwd~~t~~  136 (151)
                      ..|   +.+++||+.+.+-.+.-..+..  ..=+.++.. ++.+++.++ .+     ..+.+||..+.+
T Consensus       259 ~GG~~~~~v~~yd~~t~~W~~~~~~~~~--R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          259 TGGNDAKKTSLYDSSSDSWIPGPDMQVA--RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  325 (656)
T ss_dssp             ECSSSTTCEEEEEGGGTEEEECCCCSSC--CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             eCCCCCCceEEecCcCCceeECCCCCcc--ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence            665   4799999998764433222221  122344455 667787777 33     679999998754

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=87.94  E-value=1.3  Score=33.81  Aligned_cols=67  Identities=6%  Similarity=-0.036  Sum_probs=41.8

Q ss_pred             CCEEEEEeC----CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeE
Q psy16020         72 YNKVWCGYK----NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        72 ~~~Lw~g~~----n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++.|..+..    ..|+++|+++++..+... +..  .......++++|- .+..+.+..|++||..+.+..+..
T Consensus        47 G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~--~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~  118 (396)
T 3c5m_A           47 GKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKG--DNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY  118 (396)
T ss_dssp             SCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSC--BCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEEecCCCceEEEEECCCCcEEEeec-CCC--CccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence            356555542    279999999988654433 221  1222245666654 446667779999999987755444

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=87.34  E-value=8.2  Score=29.44  Aligned_cols=97  Identities=12%  Similarity=0.071  Sum_probs=54.8

Q ss_pred             EeCCeEEEEec--CCcEEEEEcCC-CCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC------------CeEEEEe
Q psy16020         23 HVQGRVVCALA--DGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------------NKIHVVD   87 (151)
Q Consensus        23 ~~~~~v~vgl~--nG~l~v~~~~~-~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------------n~I~vid   87 (151)
                      ..++++|+..+  ...+.+|+... ...|..-.+    +......-.+++.++++||+-.|            +.++++|
T Consensus        17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~----~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd   92 (357)
T 2uvk_A           17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAA----FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN   92 (357)
T ss_dssp             EETTEEEEECGGGTTCEEEEETTSSSCCEEECCC----CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred             EECCEEEEEeCcCCCeEEEEccccCCCCeeECCC----CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence            34888888664  34688888753 456742111    11001222456667899886433            3599999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD  124 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d  124 (151)
                      +.+.+-.+.-...+. ...=+.++..++.+++.++.+
T Consensus        93 ~~~~~W~~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~  128 (357)
T 2uvk_A           93 PKTNSWVKLMSHAPM-GMAGHVTFVHNGKAYVTGGVN  128 (357)
T ss_dssp             TTTTEEEECSCCCSS-CCSSEEEEEETTEEEEEECCC
T ss_pred             CCCCcEEECCCCCCc-ccccceEEEECCEEEEEeCcC
Confidence            998764332111111 123344555788888888754

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=87.07  E-value=13  Score=31.60  Aligned_cols=71  Identities=15%  Similarity=0.196  Sum_probs=47.2

Q ss_pred             eeCCEEEEEeC-----CeEEEEeCCCCc-EEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC-ccceeeeEe
Q psy16020         70 AVYNKVWCGYK-----NKIHVVDPKSLV-VLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH-TYQHLQDVD  142 (151)
Q Consensus        70 ~v~~~Lw~g~~-----n~I~vid~~t~~-i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~-t~~~l~~id  142 (151)
                      .-+++|+..+.     .+|+++|.++++ ..+.+..+.+  ..+..+...++.++++.++++..+||... +.+..+.+.
T Consensus       325 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~--~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~  402 (741)
T 1yr2_A          325 GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK--DNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVS  402 (741)
T ss_dssp             EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS--SEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred             ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC--CeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence            34678887763     369999998852 3334433432  35777777888888899999887777544 345555554

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=86.74  E-value=13  Score=31.31  Aligned_cols=72  Identities=8%  Similarity=-0.041  Sum_probs=49.9

Q ss_pred             eCCEEEEEeC-----CeEEEEeCCCCc--EEEEEEecCCCCCceeEEEEe-CCEEEEEEcCCCe--EEEEeCCccceeee
Q psy16020         71 VYNKVWCGYK-----NKIHVVDPKSLV--VLKSFDAHPRRESQVRQMTWA-GDGVWVSIRLDST--LRMYNAHTYQHLQD  140 (151)
Q Consensus        71 v~~~Lw~g~~-----n~I~vid~~t~~--i~~~~~~h~~~~~~I~~m~~~-~~~vwis~~~d~~--l~lwd~~t~~~l~~  140 (151)
                      -+++|+..+.     .+|+++|..+++  ..+.+..|.+ ...+..+.++ ++.+.++.++++.  |++||..+++.++.
T Consensus       296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~  374 (710)
T 2xdw_A          296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKI  374 (710)
T ss_dssp             ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred             cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEe
Confidence            4678887663     269999998875  2355555643 2367788888 7778888888874  66778767777666


Q ss_pred             EeC
Q psy16020        141 VDI  143 (151)
Q Consensus       141 idi  143 (151)
                      |..
T Consensus       375 l~~  377 (710)
T 2xdw_A          375 FPL  377 (710)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            643

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=86.51  E-value=8.3  Score=28.69  Aligned_cols=110  Identities=10%  Similarity=-0.002  Sum_probs=64.5

Q ss_pred             eeeEEeCCeEEEEecC-----CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC--------CeEEE
Q psy16020         19 LPPVHVQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK--------NKIHV   85 (151)
Q Consensus        19 ~~i~~~~~~v~vgl~n-----G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~--------n~I~v   85 (151)
                      .+....++++|+..+.     ..+.+|+.. .+.|.     .+.--.....-.++...+++||+-.|        +.+++
T Consensus        49 ~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~-----~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~  122 (306)
T 3ii7_A           49 AACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSWY-----SKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFEC  122 (306)
T ss_dssp             CEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEEE-----EEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEE
T ss_pred             eEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeEE-----ECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEE
Confidence            4445568888877653     457777754 23452     11111101222355567899887543        45999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC---------CCeEEEEeCCccc
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL---------DSTLRMYNAHTYQ  136 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~---------d~~l~lwd~~t~~  136 (151)
                      +|+.+.+-.+. ..-+ ....-+.++..++.+++.++.         ...+..||..+.+
T Consensus       123 ~d~~~~~W~~~-~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~  180 (306)
T 3ii7_A          123 YDTRTESWHTK-PSML-TQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET  180 (306)
T ss_dssp             EETTTTEEEEE-CCCS-SCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred             EeCCCCceEeC-CCCc-CCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence            99998875443 2111 122344556668888877764         4568899988753

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=85.53  E-value=13  Score=29.96  Aligned_cols=66  Identities=11%  Similarity=0.123  Sum_probs=45.6

Q ss_pred             EEeee--CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020         67 SLAAV--YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        67 ~m~~v--~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~  133 (151)
                      .+++.  ++.||++..  ++|+.+|++++++...+..... ...-..|++++++  +|++-.....|+.+|..
T Consensus       232 giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          232 TCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             CCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC-CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             EEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC-CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            44443  578999883  5899999999988444432222 1223468887554  89999999999997743

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=85.23  E-value=13  Score=29.80  Aligned_cols=108  Identities=6%  Similarity=0.087  Sum_probs=65.5

Q ss_pred             ceeeeEEeC--CeEEEEecCC-----cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeEEE
Q psy16020         17 TALPPVHVQ--GRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHV   85 (151)
Q Consensus        17 ~V~~i~~~~--~~v~vgl~nG-----~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I~v   85 (151)
                      ....|....  ++||++-..+     .+.++..  +|.+.  ....+.-..  .| +.+++.  ++.||++.  .++|+.
T Consensus       180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~--~g~~~--~~~~l~~~~--~p-~giavdp~~g~lyv~d~~~~~V~~  252 (430)
T 3tc9_A          180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTR--ESGFK--VITELTKGQ--NC-NGAETHPINGELYFNSWNAGQVFR  252 (430)
T ss_dssp             CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG--GGTSC--SEEEEEECS--SC-CCEEECTTTCCEEEEETTTTEEEE
T ss_pred             CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC--CCcee--eeeeeccCC--Cc-eEEEEeCCCCEEEEEECCCCEEEE
Confidence            355555543  3599987632     2444443  34432  122332222  33 445554  57899887  369999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCC
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~  133 (151)
                      +|+++.+....+....  ....+.|++++++  +|++-.....|..++..
T Consensus       253 ~~~~~~~~~~~~~~~~--~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          253 YDFTTQETTPLFTIQD--SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             EETTTTEEEEEEECSS--SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             EECCCCcEEEEEEcCC--CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            9999877643333221  2357788888554  78999999999998755

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=85.22  E-value=4  Score=32.97  Aligned_cols=124  Identities=9%  Similarity=0.013  Sum_probs=77.0

Q ss_pred             eeeeEE--eCCeEEEEecC---C---cEEEEEcCCCCCCCCCcceE-EEe---CCCC--CceEEEeee-CCEEEEEe---
Q psy16020         18 ALPPVH--VQGRVVCALAD---G---SVAIFRRGPDGQWDLSKYHT-VTL---GLPH--HSVRSLAAV-YNKVWCGY---   79 (151)
Q Consensus        18 V~~i~~--~~~~v~vgl~n---G---~l~v~~~~~~~~wd~~~~~~-i~l---~~~~--~pV~~m~~v-~~~Lw~g~---   79 (151)
                      .+.+..  .++++|++.--   |   +|+.......+.-.-..|.. .+.   ++++  -+|..+.+= .++||+=-   
T Consensus        28 P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDtG~  107 (381)
T 3q6k_A           28 STAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIGS  107 (381)
T ss_dssp             CCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEECSS
T ss_pred             eeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeCCC
Confidence            345666  67899998743   2   56766543100000011222 121   1111  445555543 48899732   


Q ss_pred             --------------CCeEEEEeCCCC--cEEEEEEecC---CCCCceeEEEEe---------CCEEEEEEcCCCeEEEEe
Q psy16020         80 --------------KNKIHVVDPKSL--VVLKSFDAHP---RRESQVRQMTWA---------GDGVWVSIRLDSTLRMYN  131 (151)
Q Consensus        80 --------------~n~I~vid~~t~--~i~~~~~~h~---~~~~~I~~m~~~---------~~~vwis~~~d~~l~lwd  131 (151)
                                    ..+|.+||++|.  ++.+++.-..   ...+.++.+++.         +.-++|+-..++-|.+||
T Consensus       108 ~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVyd  187 (381)
T 3q6k_A          108 VEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYD  187 (381)
T ss_dssp             CSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEE
T ss_pred             cCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEE
Confidence                          348999999999  9999988431   134679999988         234599999999999999


Q ss_pred             CCccceeeeE
Q psy16020        132 AHTYQHLQDV  141 (151)
Q Consensus       132 ~~t~~~l~~i  141 (151)
                      ..+.+--.-.
T Consensus       188 l~~~~swRv~  197 (381)
T 3q6k_A          188 HKKQDSWNVT  197 (381)
T ss_dssp             TTTTEEEEEE
T ss_pred             CCCCcEEEEc
Confidence            9986655443

>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}

Probab=85.09  E-value=2.8  Score=33.76  Aligned_cols=75  Identities=13%  Similarity=0.136  Sum_probs=56.5

Q ss_pred             eCCEEEEEe----CC--eEEEEeCCCCcEEEEEEecCCCCCceeEE-----EEeCCEEEEEEcCCCeEEEEeCCccceee
Q psy16020         71 VYNKVWCGY----KN--KIHVVDPKSLVVLKSFDAHPRRESQVRQM-----TWAGDGVWVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        71 v~~~Lw~g~----~n--~I~vid~~t~~i~~~~~~h~~~~~~I~~m-----~~~~~~vwis~~~d~~l~lwd~~t~~~l~  139 (151)
                      .+++-|...    .+  .|.++|.+++++++++.-...+...|..+     ....+.+|++......|.++|.+ ++.+.
T Consensus        36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~-G~~~~  114 (369)
T 3s9j_A           36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ-GEIIR  114 (369)
T ss_dssp             ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT-CCEEE
T ss_pred             cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCC-ceEEE
Confidence            556544443    47  99999999999999988765543343332     22477889999999999999998 89999


Q ss_pred             eEeCCcc
Q psy16020        140 DVDIEPY  146 (151)
Q Consensus       140 ~idi~~~  146 (151)
                      ++++.+.
T Consensus       115 k~~~~~~  121 (369)
T 3s9j_A          115 NYNFQTP  121 (369)
T ss_dssp             EEECCCT
T ss_pred             EEecCCC
Confidence            9887654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=84.33  E-value=13  Score=28.87  Aligned_cols=115  Identities=8%  Similarity=-0.047  Sum_probs=72.3

Q ss_pred             ceeeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee--CCEEEEEeC--CeEEEEe
Q psy16020         17 TALPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV--YNKVWCGYK--NKIHVVD   87 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~n--G~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v--~~~Lw~g~~--n~I~vid   87 (151)
                      ....|...  ++.+|++-..  +.|..++.+  |.    ...  .+.. .-.--+.|++-  +++||.+-.  ++|+.+|
T Consensus       160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~----~~~--~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~  231 (349)
T 3v64_C          160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GS----GRR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN  231 (349)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEETT--SC----SCE--ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CcceEEEecCcCeEEEeccCCCCEEEEEeCC--CC----CcE--EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence            34555554  4677777643  456666543  32    111  1211 01222566664  688998873  5899999


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .+.... +.+...  .......|++.++.+|++-.....|..+|..+++....|.
T Consensus       232 ~dG~~~-~~~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  283 (349)
T 3v64_C          232 LDGSHR-KAVISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR  283 (349)
T ss_dssp             TTSCSC-EEEECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CCCCce-EEEEeC--CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence            875333 333322  1346788888899999999999999999988887777764

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=84.14  E-value=9.7  Score=32.47  Aligned_cols=105  Identities=10%  Similarity=0.089  Sum_probs=59.3

Q ss_pred             eCCeEEEEec----CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEe--CC--eEEEEeCCCCcEEE
Q psy16020         24 VQGRVVCALA----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY--KN--KIHVVDPKSLVVLK   95 (151)
Q Consensus        24 ~~~~v~vgl~----nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~--~n--~I~vid~~t~~i~~   95 (151)
                      .++++|+...    ++.|.+++.....    .....+- ......+..+...+++|++..  ++  +|+++|.. ++..+
T Consensus       326 dg~~l~~~s~~~~~~~~l~~~d~~~~~----~~~~~l~-~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~  399 (741)
T 1yr2_A          326 VGDQLWFVSGDGAPLKKIVRVDLSGST----PRFDTVV-PESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLD-GKPAG  399 (741)
T ss_dssp             ETTEEEEEECTTCTTCEEEEEECSSSS----CEEEEEE-CCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETT-SCEEE
T ss_pred             cCCEEEEEECCCCCCCEEEEEeCCCCc----cccEEEe-cCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC-CCcee
Confidence            4455655543    3446666643210    1112222 222356777777788876665  23  68888874 55556


Q ss_pred             EEEecCCCCCceeEEEEeCC--EEEEEEc---CCCeEEEEeCCccc
Q psy16020         96 SFDAHPRRESQVRQMTWAGD--GVWVSIR---LDSTLRMYNAHTYQ  136 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~--~vwis~~---~d~~l~lwd~~t~~  136 (151)
                      .+..+.  ...|..+..+++  .++++.+   ..+.|++||..+.+
T Consensus       400 ~l~~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          400 AVSLPG--IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             ECBCSS--SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             eccCCC--CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            665432  246777766533  4554443   45789999998765

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=82.23  E-value=14  Score=28.00  Aligned_cols=109  Identities=9%  Similarity=0.023  Sum_probs=62.3

Q ss_pred             eeeeEEeCCeEEEEecC-----------CcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC------
Q psy16020         18 ALPPVHVQGRVVCALAD-----------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------   80 (151)
Q Consensus        18 V~~i~~~~~~v~vgl~n-----------G~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~------   80 (151)
                      =.+....++++|+-.+.           ..+-+|+.. ...|..-.+    ......--.+++..+++||+-.|      
T Consensus        58 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~----~~p~~r~~~~~~~~~~~iyv~GG~~~~~~  132 (357)
T 2uvk_A           58 QATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK-TNSWVKLMS----HAPMGMAGHVTFVHNGKAYVTGGVNQNIF  132 (357)
T ss_dssp             SCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT-TTEEEECSC----CCSSCCSSEEEEEETTEEEEEECCCHHHH
T ss_pred             cceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC-CCcEEECCC----CCCcccccceEEEECCEEEEEeCcCCCcC
Confidence            34555668888886543           247777764 345632211    11000112344557899887654      


Q ss_pred             -----------------------------------CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcC--
Q psy16020         81 -----------------------------------NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRL--  123 (151)
Q Consensus        81 -----------------------------------n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~--  123 (151)
                                                         +.++++|+++.+-...-. -+.....-..++..++.+++.++.  
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~~~~iyv~GG~~~  211 (357)
T 2uvk_A          133 NGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNKGDKTWLINGEAK  211 (357)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEETTEEEEECCEEE
T ss_pred             cccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC-CCCCCcccccEEEECCEEEEEeeecC
Confidence                                               579999999876444322 111111225667778888887664  


Q ss_pred             ----CCeEEEEeC
Q psy16020        124 ----DSTLRMYNA  132 (151)
Q Consensus       124 ----d~~l~lwd~  132 (151)
                          ...+..||.
T Consensus       212 ~~~~~~~v~~~d~  224 (357)
T 2uvk_A          212 PGLRTDAVFELDF  224 (357)
T ss_dssp             TTEECCCEEEEEC
T ss_pred             CCcccCceEEEEe
Confidence                455777765

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=81.09  E-value=3.4  Score=35.70  Aligned_cols=70  Identities=11%  Similarity=0.049  Sum_probs=48.9

Q ss_pred             CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         72 YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        72 ~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +++||.+-.  ++|+++|.+.... +.+............|++.++.++++-...+.|..+|..+++.+..|.
T Consensus       551 ~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~  622 (699)
T 1n7d_A          551 SGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA  622 (699)
T ss_dssp             TCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred             CCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence            467887773  5899999875333 333221111234566777888998788889999999999888888774

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=80.15  E-value=18  Score=27.73  Aligned_cols=116  Identities=10%  Similarity=-0.038  Sum_probs=73.5

Q ss_pred             ceeeeEEe--CCeEEEEec--CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC--CeEEEEeC
Q psy16020         17 TALPPVHV--QGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDP   88 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vgl~--nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~--n~I~vid~   88 (151)
                      ....|...  .+.+|++-.  ++.|..++.+  |.    ....+--..-..| +.|++-  +++||.+-.  ++|+.+|.
T Consensus       123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~----~~~~~~~~~l~~P-nglavd~~~~~lY~aD~~~~~I~~~d~  195 (318)
T 3sov_A          123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GS----SRFIIINSEIYWP-NGLTLDYEEQKLYWADAKLNFIHKSNL  195 (318)
T ss_dssp             SEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SC----SCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CC----CeEEEEECCCCCc-cEEEEeccCCEEEEEECCCCEEEEEcC
Confidence            34455554  467888763  4666666543  42    1122211111123 566664  588988873  68999998


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.... +.+..  ........|++.+++++.+-...+.|..+|..+++....|.
T Consensus       196 dG~~~-~~~~~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          196 DGTNR-QAVVK--GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             TSCSC-EEEEC--SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CCCce-EEEec--CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence            74333 33331  12346788888999998888899999999998888777764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	151
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.44
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.41
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.37
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.32
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.31
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.26
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.25
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.25
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.25
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.23
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.23
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.22
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.2
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.19
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.18
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.17
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.15
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.13
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.05
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.04
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.04
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	98.97
d1tbga_	340	beta1-subunit of the signal-transducing G protein	98.97
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	98.96
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	98.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.89
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	98.84
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	98.82
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	98.6
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.54
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.53
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.47
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.41
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.39
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.3
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.3
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.29
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.29
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.25
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.24
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.23
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.15
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.05
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	97.92
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	97.75
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	97.69
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	97.66
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	97.24
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.23
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.16
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.85
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.78
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.29
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	95.19
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	95.19
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	95.13
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	95.13
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	95.13
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.0
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	94.22
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	93.83
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.78
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	92.68
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	92.24
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	91.79
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	91.69
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	90.99
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	90.84
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	90.7
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	90.5
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	89.25
d1shyb1	476	Hepatocyte growth factor receptor {Human (Homo sap	87.89
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	87.65
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	87.02
d1q47a_	495	Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]	83.56
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	81.28

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.44  E-value=2.3e-12  Score=96.32  Aligned_cols=120  Identities=14%  Similarity=0.084  Sum_probs=94.2

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      ...++++.++-+ ++|.++.+.+  +.+++|..||.|.+|+....     .....+.......+|+++.+..  +.|.+|
T Consensus       214 ~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g  288 (340)
T d1tbga_         214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-----QELMTYSHDNIICGITSVSFSKSGRLLLAG  288 (340)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----EEEEEECCTTCCSCEEEEEECSSSCEEEEE
T ss_pred             CCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc-----ccccccccccccCceEEEEECCCCCEEEEE
Confidence            456677777654 7999999875  46888999999999987521     1222233334458899999974  568888


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEe
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYN  131 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd  131 (151)
                      +. +.|++||..+++..+++.+|..   .|+++.+++++ .++|++.|+.|++||
T Consensus       289 ~~dg~i~iwd~~~~~~~~~~~~H~~---~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         289 YDDFNCNVWDALKADRAGVLAGHDN---RVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             ETTSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ECCCEEEEEECCCCcEEEEEcCCCC---CEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            85 6899999999999999999975   89999999775 478999999999998

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.7e-11  Score=89.87  Aligned_cols=129  Identities=13%  Similarity=0.108  Sum_probs=101.6

Q ss_pred             ceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-CeEE
Q psy16020          7 TPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIH   84 (151)
Q Consensus         7 ~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~   84 (151)
                      +++..+.-+ ..+.++.+.++++++|..||+|.+|+....     +  .......+..+|.++.+.++.|.+|+. +.|+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~-----~--~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~  240 (342)
T d2ovrb2         168 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-----N--CIHTLTGHQSLTSGMELKDNILVSGNADSTVK  240 (342)
T ss_dssp             EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC-----C--EEEEECCCCSCEEEEEEETTEEEEEETTSCEE
T ss_pred             eeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccc-----e--eeeEecccccceeEEecCCCEEEEEcCCCEEE
Confidence            344444433 567777778889999999999999987521     1  122333345899999999999999885 6899


Q ss_pred             EEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         85 VVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        85 vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      +||..+.+..+.+..+......+.++..+++. .++++.|+.|++||.+++++++++..
T Consensus       241 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~s~Dg~i~iwd~~tg~~i~~~~~  298 (342)
T d2ovrb2         241 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLVT  298 (342)
T ss_dssp             EEETTTCCEEEEECSTTSCSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEEEEEE
T ss_pred             EEecccccccccccccceeeeceeecccCCCe-eEEEcCCCEEEEEECCCCCEEEEEec
Confidence            99999999999999877666788888887765 67999999999999999999988753

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.37  E-value=8.5e-12  Score=97.75  Aligned_cols=119  Identities=16%  Similarity=0.163  Sum_probs=91.7

Q ss_pred             CceeeeEEeCC-eEEEEecCCcEEEEEcCCCCCCCCCcceEEE----eCCCCCceEEEeeeC--CEEEEEeC-C---eEE
Q psy16020         16 DTALPPVHVQG-RVVCALADGSVAIFRRGPDGQWDLSKYHTVT----LGLPHHSVRSLAAVY--NKVWCGYK-N---KIH   84 (151)
Q Consensus        16 ~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~----l~~~~~pV~~m~~v~--~~Lw~g~~-n---~I~   84 (151)
                      ..+.++.+.++ .+++|..||+|.+|+...+.     ....++    +..+..||+++.+..  ..|..|+. +   .|+
T Consensus       185 ~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~-----~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~  259 (393)
T d1sq9a_         185 QFATSVDISERGLIATGFNNGTVQISELSTLR-----PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT  259 (393)
T ss_dssp             CCCCEEEECTTSEEEEECTTSEEEEEETTTTE-----EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred             CcEEEEEECCCCEEEEEeCCCcEEEEeecccc-----cccccccccccccccceEEEcccccccceeeeecCCCCcceee
Confidence            35778887655 67789999999999875321     112222    222458999999973  56887774 3   499


Q ss_pred             EEeCCCCcEEEEEE-------------ecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         85 VVDPKSLVVLKSFD-------------AHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        85 vid~~t~~i~~~~~-------------~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +||+++++..+++.             +|++   .|+++++++++ .++|++.|++|++||.+++++++.+.
T Consensus       260 lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~---~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~  328 (393)
T d1sq9a_         260 LYETEFGERIGSLSVPTHSSQASLGEFAHSS---WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN  328 (393)
T ss_dssp             EEETTTCCEEEEECBC--------CCBSBSS---CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             ecccccceeeeeeccccccccceeeeecccC---ceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEEC
Confidence            99999999998885             6764   89999999764 58999999999999999999999875

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.32  E-value=9.3e-11  Score=89.71  Aligned_cols=135  Identities=17%  Similarity=0.125  Sum_probs=98.0

Q ss_pred             CCceeeeeeCC-CceeeeEEeCC--e-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          5 HPTPYPLNKIL-DTALPPVHVQG--R-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         5 ~~~~l~~i~l~-~~V~~i~~~~~--~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      ..++++.++-+ +.|.++.++++  . +.+|..||.|.+|+....       ........+..||+++....  +.+.+|
T Consensus       135 ~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~v~~~p~~~~l~~~  207 (311)
T d1nr0a1         135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNPDGSLFAST  207 (311)
T ss_dssp             TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             cccccccccccccccccccccccceeeeccccccccccccccccc-------ccccccccccccccccccCccccccccc
Confidence            34555555544 68999998643  3 555788999999986521       12223444459999999963  567767


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCC----CCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRR----ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~----~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +. +.|++||..+++....++.....    ...|++|.+++++ .+++++.|+.|++||.++++++++++....
T Consensus       208 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~  281 (311)
T d1nr0a1         208 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR  281 (311)
T ss_dssp             ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCC
Confidence            64 78999999999988887632211    2379999998653 478899999999999999999999976543

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.31  E-value=5e-11  Score=91.24  Aligned_cols=131  Identities=9%  Similarity=0.021  Sum_probs=99.3

Q ss_pred             CCCceeeeeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l-~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      .+.+..+.+.= ++.|+|+.+.+  +++.+|..||+|.+|+.....     ......+..+..||++|.+..  ..|.++
T Consensus        46 ~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~v~~s~d~~~l~~~  120 (311)
T d1nr0a1          46 GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT-----HILKTTIPVFSGPVKDISWDSESKRIAAV  120 (311)
T ss_dssp             TCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT-----CCEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred             CCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccc-----cccccccccccCccccccccccccccccc
Confidence            34455555543 47999999965  468889999999999986432     122233433458999999974  446666


Q ss_pred             eCC---eEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         79 YKN---KIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        79 ~~n---~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +++   .+.|||.++++..+++.+|++   .|+++.+++++  ..++++.|+.|++||.++++....+.
T Consensus       121 ~~~~~~~~~v~~~~~~~~~~~l~~h~~---~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~  186 (311)
T d1nr0a1         121 GEGRERFGHVFLFDTGTSNGNLTGQAR---AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG  186 (311)
T ss_dssp             ECCSSCSEEEEETTTCCBCBCCCCCSS---CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC
T ss_pred             ccccccccccccccccccccccccccc---ccccccccccceeeecccccccccccccccccccccccc
Confidence            542   489999999999999999975   89999997543  67899999999999999998887764

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.7e-10  Score=86.94  Aligned_cols=118  Identities=13%  Similarity=0.043  Sum_probs=94.3

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      ..+.++++....+++|.++.+.+  +.+++|..||.+.+|+...        ...+....+..+|+++.+..  +.|.+|
T Consensus       212 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~--------~~~~~~~~~~~~i~~v~~s~~g~~l~s~  283 (337)
T d1gxra_         212 LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK--------PDKYQLHLHESCVLSLKFAYCGKWFVST  283 (337)
T ss_dssp             TTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--------SCEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             cccceeecccccccceEEEEEcccccccceeccccccccccccc--------cccccccccccccceEEECCCCCEEEEE
Confidence            35667888889999999999864  4688999999999998752        22334444468999999974  467777


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeC
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNA  132 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~  132 (151)
                      +. +.|++||.++++...++. |.   ..|.++.+++++ .+++++.|+.|++||.
T Consensus       284 s~Dg~i~iwd~~~~~~~~~~~-~~---~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         284 GKDNLLNAWRTPYGASIFQSK-ES---SSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             ETTSEEEEEETTTCCEEEEEE-CS---SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             eCCCeEEEEECCCCCEEEEcc-CC---CCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            74 689999999999988887 54   389999999765 4778899999999996

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.25  E-value=3.1e-10  Score=86.71  Aligned_cols=137  Identities=17%  Similarity=0.122  Sum_probs=98.8

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC---CEE
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY---NKV   75 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~---~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~---~~L   75 (151)
                      .+.++++.++-+ .+|.++.+.+.   .+.+|..||.+.+|+....     +....+... .+..+|+|+.+..   +.+
T Consensus       147 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-----~~~~~~~~~~~~~~~v~~v~~~pd~~~~l  221 (325)
T d1pgua1         147 DSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-----KFSASDRTHHKQGSFVRDVEFSPDSGEFV  221 (325)
T ss_dssp             TTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-----EEEEEECSSSCTTCCEEEEEECSTTCCEE
T ss_pred             cccccceeeeecccccccccccccccceEEEeeccccccccccccc-----ccceecccccCCCCccEEeeeccccceec
Confidence            345677777754 68999988654   3677888999999986421     122222222 2348899999973   345


Q ss_pred             EEEe-CCeEEEEeCCCCcEEEEEEecCCCCC-ceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         76 WCGY-KNKIHVVDPKSLVVLKSFDAHPRRES-QVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        76 w~g~-~n~I~vid~~t~~i~~~~~~h~~~~~-~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .+|+ ++.|++||.++++..+++++|..... .+.++.......+++++.|+.|++||.++.++++.+....
T Consensus       222 ~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~  293 (325)
T d1pgua1         222 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK  293 (325)
T ss_dssp             EEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred             cccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecC
Confidence            6565 46899999999999999999875322 3455554444568899999999999999999999886543

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.25  E-value=2.1e-10  Score=87.72  Aligned_cols=115  Identities=22%  Similarity=0.156  Sum_probs=84.7

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCC-CCCCc----ceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEE
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQ-WDLSK----YHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHV   85 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~-wd~~~----~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~v   85 (151)
                      ++|.+|.+.+  +.+++|..||.|.+|+...... .+...    ........+..+|+++.+.  +..|.+|+. +.|++
T Consensus       255 ~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~v  334 (388)
T d1erja_         255 DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF  334 (388)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEE
Confidence            5799999875  4788899999999998753221 11111    1122222335899999996  356888885 68999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeC-------CEEEEEEcCCCeEEEEeCC
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAG-------DGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~-------~~vwis~~~d~~l~lwd~~  133 (151)
                      ||.++++..+++.+|++   .|.++....       ...++|++.|+.|++||.+
T Consensus       335 wd~~~~~~~~~l~~H~~---~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         335 WDKKSGNPLLMLQGHRN---SVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EETTTCCEEEEEECCSS---CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EECCCCcEEEEEeCCCC---CEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            99999999999999975   899998753       3568899999999999975

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.8e-10  Score=84.19  Aligned_cols=96  Identities=16%  Similarity=0.180  Sum_probs=76.5

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe-CCeEEEEeCCCCcEEEEEEecCC
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-KNKIHVVDPKSLVVLKSFDAHPR  102 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~  102 (151)
                      ..+++|..||.|.+|+...+     .  ....+..+..+|+++.+..  +.|.+|+ ++.|++||.++++..+++.+|+.
T Consensus       218 ~~~~~~~~d~~i~~~~~~~~-----~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  290 (317)
T d1vyhc1         218 PFLLSGSRDKTIKMWDVSTG-----M--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH  290 (317)
T ss_dssp             CEEEEEETTSEEEEEETTTT-----E--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred             ceeEeccCCCEEEEEECCCC-----c--EEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCC
Confidence            35888999999999987521     1  1223333458999999874  4577777 47899999999999999999975


Q ss_pred             CCCceeEEEEeCCE-EEEEEcCCCeEEEEe
Q psy16020        103 RESQVRQMTWAGDG-VWVSIRLDSTLRMYN  131 (151)
Q Consensus       103 ~~~~I~~m~~~~~~-vwis~~~d~~l~lwd  131 (151)
                         .|++|.+++++ .++|++.|++|++||
T Consensus       291 ---~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         291 ---FVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             ---CEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             ---CEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence               89999998664 588999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=7e-10  Score=81.96  Aligned_cols=125  Identities=11%  Similarity=-0.018  Sum_probs=94.0

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeCCEEEEEeC-
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYK-   80 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~~~Lw~g~~-   80 (151)
                      ...++++...-+ ..|.++...++.+++|..||.|.+|+....     +....+.-. .+..++.++...++.+.+|+. 
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~D  279 (342)
T d2ovrb2         205 ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG-----QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD  279 (342)
T ss_dssp             TTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC-----CEEEEECSTTSCSSCEEEEEECSSEEEEEETT
T ss_pred             ccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccc-----cccccccccceeeeceeecccCCCeeEEEcCC
Confidence            455677777655 688999999999999999999999987532     222233222 234788888888888888885 


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCC--CCceeEEEEeCCEE-EEEEcCCC----eEEEEeCC
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRR--ESQVRQMTWAGDGV-WVSIRLDS----TLRMYNAH  133 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~--~~~I~~m~~~~~~v-wis~~~d~----~l~lwd~~  133 (151)
                      +.|++||.++++..+++......  ...|+++.+++++. .+++++|+    .|++||-.
T Consensus       280 g~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         280 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred             CEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence            68999999999999998743221  23699999999887 55667776    49999965

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=6.5e-10  Score=84.75  Aligned_cols=131  Identities=11%  Similarity=0.094  Sum_probs=98.0

Q ss_pred             CceeeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-
Q psy16020          6 PTPYPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-   80 (151)
Q Consensus         6 ~~~l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-   80 (151)
                      .++++.+...++|.|+.+.++  +++.| +||.|.+|+....+..  ..........+..+|+|+.+..  +.|.+|+. 
T Consensus        42 ~~~~~~~~H~~~V~~v~fs~~g~~latg-~dg~V~iWd~~~~~~~--~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~d  118 (337)
T d1gxra_          42 ARQINTLNHGEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNK--SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA  118 (337)
T ss_dssp             EEEEEEECCSSCCCEEEECSSSSEEEEE-CBSEEEEEETTSTTCC--SCSEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred             ceEEEECCCCCcEEEEEECCCCCEEEEE-ECCEEEEEEccCCccc--ceeEEeeecCCCCcEEEEEEcCCCCEEEEeecc
Confidence            356777777899999999764  56655 5999999998654422  2333445555568999999974  56877774 


Q ss_pred             CeEEEEeCC--CCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         81 NKIHVVDPK--SLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        81 n~I~vid~~--t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +.|++||..  +.++...+..|..   .|.++.+++++ ..++++.++.+++||.++.++.....
T Consensus       119 g~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~  180 (337)
T d1gxra_         119 STLSIWDLAAPTPRIKAELTSSAP---ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ  180 (337)
T ss_dssp             SEEEEEECCCC--EEEEEEECSSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence            689999977  4567778888864   88999888654 57889999999999999988776654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.7e-09  Score=77.01  Aligned_cols=137  Identities=12%  Similarity=0.102  Sum_probs=106.3

Q ss_pred             CCCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCC-----------------------------C---CCC
Q psy16020          3 YPHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPD-----------------------------G---QWD   49 (151)
Q Consensus         3 ~~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~-----------------------------~---~wd   49 (151)
                      ..+.++++.++-+ ++|.+|.+.++.+++|..||.+.+|+...+                             +   .|+
T Consensus        42 ~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (293)
T d1p22a2          42 KNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD  121 (293)
T ss_dssp             SSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEE
T ss_pred             CCCCcEEEEEecCCCCEeeeecccceeecccccccccccccccccccccccccccccccccccccceeecccccceeEee
Confidence            4567888888754 799999999999999999999999987521                             0   133


Q ss_pred             CCcc----eEEEeCCCCCceEEEeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCC
Q psy16020         50 LSKY----HTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLD  124 (151)
Q Consensus        50 ~~~~----~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d  124 (151)
                      ....    ....+..+..+|.++....+.+..+++ +.|.+||.++++...++.+|..   .|..+...+.. .+++..|
T Consensus       122 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~---~v~~~~~~~~~-l~~~~~d  197 (293)
T d1p22a2         122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR---GIACLQYRDRL-VVSGSSD  197 (293)
T ss_dssp             CSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS---CEEEEEEETTE-EEEEETT
T ss_pred             ccccccccccccccccccccccceecccccccccCCCceeeecCCCCcEEEEEccccc---ccccccCCCCe-EEEecCC
Confidence            2221    122233345788888888888777775 5899999999999999998865   78888887765 6799999


Q ss_pred             CeEEEEeCCccceeeeEeC
Q psy16020        125 STLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       125 ~~l~lwd~~t~~~l~~idi  143 (151)
                      +.|++||.++.+.+....-
T Consensus       198 g~i~i~d~~~~~~~~~~~~  216 (293)
T d1p22a2         198 NTIRLWDIECGACLRVLEG  216 (293)
T ss_dssp             SCEEEEETTTCCEEEEECC
T ss_pred             CEEEEEecccceeeeeecc
Confidence            9999999999998887753

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=2.2e-09  Score=78.13  Aligned_cols=130  Identities=15%  Similarity=0.113  Sum_probs=96.8

Q ss_pred             CCCceeeeeeCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---------
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---------   71 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---------   71 (151)
                      .+.+.+..++-+ +.+.++.+.+  +.+++|..||.|.+|+.....       ....+..+..++.++.+.         
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~  203 (317)
T d1vyhc1         131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-------CKAELREHRHVVECISWAPESSYSSIS  203 (317)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred             ccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccce-------eeEEEecCCCCceEEEEeeccccceee
Confidence            445666677654 6788887764  468888899999999875321       122333333556665542         


Q ss_pred             -------------CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         72 -------------YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        72 -------------~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                                   +..+.+|+. +.|++||..+++..+++.+|..   .|.++.+++++ .+++++.|+.|++||.++.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  280 (317)
T d1vyhc1         204 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKR  280 (317)
T ss_dssp             GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS---CEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred             ccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCC---CEEEEEECCCCCEEEEEECCCeEEEEECCCCc
Confidence                         234667774 6899999999999999999975   89999998665 47899999999999999999


Q ss_pred             eeeeEeC
Q psy16020        137 HLQDVDI  143 (151)
Q Consensus       137 ~l~~idi  143 (151)
                      +++.+..
T Consensus       281 ~~~~~~~  287 (317)
T d1vyhc1         281 CMKTLNA  287 (317)
T ss_dssp             CCEEEEC
T ss_pred             EEEEEcC
Confidence            9988863

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.19  E-value=1.3e-10  Score=86.55  Aligned_cols=116  Identities=11%  Similarity=0.056  Sum_probs=86.3

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee---eCCEEEEEe
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA---VYNKVWCGY   79 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~---v~~~Lw~g~   79 (151)
                      .+.+++..++-+ .+|.++.+.++.+++|..||+|.+|+...       ..+.+....  .++.++..   -+.-|.+|+
T Consensus       231 ~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~  301 (355)
T d1nexb2         231 ENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAND-------YSRKFSYHH--TNLSAITTFYVSDNILVSGS  301 (355)
T ss_dssp             TTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTT-------CCEEEEEEC--TTCCCCCEEEECSSEEEEEE
T ss_pred             cccccccccccccccccccccccceeeeeecccccccccccc-------cceeccccc--CCceEEEEEcCCCCEEEEEe
Confidence            456677777755 68999999999999999999999998752       123334333  44444433   234566667


Q ss_pred             CCeEEEEeCCCCcEEE-EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEe
Q psy16020         80 KNKIHVVDPKSLVVLK-SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYN  131 (151)
Q Consensus        80 ~n~I~vid~~t~~i~~-~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd  131 (151)
                      +++|++||.++++..+ .+.+|.+   .|.++.++++...+++++|+.++||-
T Consensus       302 d~~i~vwd~~tg~~~~~~~~~~~~---~V~~v~~~~~~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         302 ENQFNIYNLRSGKLVHANILKDAD---QIWSVNFKGKTLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             TTEEEEEETTTCCBCCSCTTTTCS---EEEEEEEETTEEEEEEESSSCEEEEE
T ss_pred             CCEEEEEECCCCCEEEEEecCCCC---CEEEEEEcCCeEEEEEECCCcEEEEE
Confidence            8899999999999775 4566754   89999999999888999999866653

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=2.8e-10  Score=84.58  Aligned_cols=89  Identities=22%  Similarity=0.176  Sum_probs=75.9

Q ss_pred             cceEEEeCCCCCc-eEEEeeeCCEEEEEeC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEE
Q psy16020         52 KYHTVTLGLPHHS-VRSLAAVYNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRM  129 (151)
Q Consensus        52 ~~~~i~l~~~~~p-V~~m~~v~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~l  129 (151)
                      .|+...|..+..+ ++|+.+-++.|..|+. ++|+|||.++++..++|++|+.   .|.++++++++.++|++.|+.|++
T Consensus         2 ~p~~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~---~V~~l~~s~~~~l~s~s~D~~i~i   78 (355)
T d1nexb2           2 VPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDG---GVWALKYAHGGILVSGSTDRTVRV   78 (355)
T ss_dssp             CCEEEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSS---CEEEEEEETTTEEEEEETTCCEEE
T ss_pred             CCCcEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCC---CEEEEEEcCCCEEEEEeccccccc
Confidence            3566677655555 5899988899999885 6899999999999999999975   899999999889999999999999


Q ss_pred             EeCCccceeeeEeC
Q psy16020        130 YNAHTYQHLQDVDI  143 (151)
Q Consensus       130 wd~~t~~~l~~idi  143 (151)
                      |+..+.+.......
T Consensus        79 w~~~~~~~~~~~~~   92 (355)
T d1nexb2          79 WDIKKGCCTHVFEG   92 (355)
T ss_dssp             EETTTTEEEEEECC
T ss_pred             cccccccccccccc
Confidence            99998887766543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.1e-09  Score=79.05  Aligned_cols=117  Identities=15%  Similarity=0.070  Sum_probs=89.7

Q ss_pred             CCCceeeeeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeCCEEEEEeC-C
Q psy16020          4 PHPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-N   81 (151)
Q Consensus         4 ~~~~~l~~i~l~-~~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~~~Lw~g~~-n   81 (151)
                      .+.+++..++-+ ..|.++.+.++.+++|..||+|.+|+....       ........+..++.++...++.|.+|+. +
T Consensus       166 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg  238 (293)
T d1p22a2         166 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-------ACLRVLEGHEELVRCIRFDNKRIVSGAYDG  238 (293)
T ss_dssp             TTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEECCSSEEEEEETTS
T ss_pred             CCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccc-------eeeeeecccceeeeeccccceEEEEEcCCC
Confidence            445667777655 688888889999999999999999987521       1122233334788888777788888885 6


Q ss_pred             eEEEEeCCC---------CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEe
Q psy16020         82 KIHVVDPKS---------LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYN  131 (151)
Q Consensus        82 ~I~vid~~t---------~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd  131 (151)
                      .|++||..+         ....+++.+|++   .|.++.+.+.. ++|++.|++|++||
T Consensus       239 ~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~---~V~~v~~d~~~-l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         239 KIKVWDLVAALDPRAPAGTLCLRTLVEHSG---RVFRLQFDEFQ-IVSSSHDDTILIWD  293 (293)
T ss_dssp             CEEEEEHHHHTSTTSCTTTTEEEEECCCSS---CCCCEEECSSC-EEECCSSSEEEEEC
T ss_pred             EEEEEECCCCccccccCCceeeEEecCCCC---CEEEEEEcCCE-EEEEecCCEEEEeC
Confidence            899998542         457888999975   89999987665 78999999999998

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.15  E-value=3.6e-10  Score=83.63  Aligned_cols=108  Identities=14%  Similarity=0.210  Sum_probs=81.9

Q ss_pred             CceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee------------CCEEEEEeC-
Q psy16020         16 DTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV------------YNKVWCGYK-   80 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v------------~~~Lw~g~~-   80 (151)
                      .+|.+|.+.++  ++++|..||.|.+|+.....      ........+..+|+++.+.            +..+..|+. 
T Consensus       163 ~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D  236 (287)
T d1pgua2         163 AKPSYISISPSETYIAAGDVMGKILLYDLQSRE------VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD  236 (287)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred             CceeEEEeccCccccccccccccccceeecccc------cccccccccccccceeeecccccccccccCCCCeeEeecCC
Confidence            68999998754  69999999999999875211      0111122335788888763            234666774 


Q ss_pred             CeEEEEeCCC-CcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeC
Q psy16020         81 NKIHVVDPKS-LVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA  132 (151)
Q Consensus        81 n~I~vid~~t-~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~  132 (151)
                      ++|++||.++ .+..+.+.+|+.   .|+++.+.+++..+|++.|+.|++||.
T Consensus       237 ~~i~iw~~~~~~~~~~~~~~h~~---~V~~v~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         237 TNIFIYSVKRPMKIIKALNAHKD---GVNNLLWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             SCEEEEESSCTTCCEEETTSSTT---CEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             CeEEEEECCCCCeEEEEeCCCCC---CeEEEEECCCCEEEEEECCCeEEEEEE
Confidence            6899999876 667788889975   899999988888999999999999985

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.13  E-value=6e-10  Score=82.73  Aligned_cols=119  Identities=13%  Similarity=0.071  Sum_probs=83.8

Q ss_pred             eeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEE
Q psy16020         11 LNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHV   85 (151)
Q Consensus        11 ~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~v   85 (151)
                      .+.-+++|.++.+.+  +.+++|..||.|.+|+...+...  .  ....+..+..+|+|+.+..  +.|..|+. +.|++
T Consensus       175 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~--~--~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~i  250 (299)
T d1nr0a2         175 TIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL--A--HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV  250 (299)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE--S--CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc--c--ccccccccccccccccccccccceEEEcCCCEEEE
Confidence            334468999999865  46888999999999987532110  0  1112233458999999864  56777775 68999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCC
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~  133 (151)
                      ||.++.+....+..+......|.++.+.++..++|++.|+.|++||..
T Consensus       251 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         251 WNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             EETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred             EECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCCCEEEEEecc
Confidence            999987654444433323457888877766778899999999999973

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.05  E-value=1.9e-09  Score=83.40  Aligned_cols=116  Identities=9%  Similarity=0.037  Sum_probs=86.8

Q ss_pred             CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeC
Q psy16020         14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDP   88 (151)
Q Consensus        14 l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~   88 (151)
                      +.+||.|+.+.++  .+.+|..||.|.+|+... +.    ......+..+..||++|.+.  ++.|..|+. ++|++||.
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~-~~----~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~   80 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSG-NK----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL   80 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEET-TE----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCC-CC----EEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEee
Confidence            4589999999764  677889999999998742 11    11223454556999999997  466776664 68999999


Q ss_pred             CCCcEEEEEE--ecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccce
Q psy16020         89 KSLVVLKSFD--AHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        89 ~t~~i~~~~~--~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~  137 (151)
                      ++++.++.+.  .|.   ..|++|.+++++- +++++.|+.+++|+..+.+.
T Consensus        81 ~~~~~~~~~~~~~~~---~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~  129 (371)
T d1k8kc_          81 KGRTWKPTLVILRIN---RAARCVRWAPNEKKFAVGSGSRVISICYFEQEND  129 (371)
T ss_dssp             ETTEEEEEEECCCCS---SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT
T ss_pred             ccccccccccccccc---ccccccccccccccceeecccCcceeeeeecccc
Confidence            9888766654  444   4899999986654 78889999999999876543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.04  E-value=1.1e-08  Score=75.36  Aligned_cols=127  Identities=13%  Similarity=0.158  Sum_probs=94.6

Q ss_pred             CCCceeeeeeCCCceeeeEEeCCeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeC-CCCCceEEEeeeC--CEEEEEe
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQGRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVY--NKVWCGY   79 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~-~~~~pV~~m~~v~--~~Lw~g~   79 (151)
                      ...+++..++...++.++...++.+++|..+| .+.+|+...       ......+. ....+|++|.+..  +.|.+|+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~  181 (287)
T d1pgua2         109 FTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSD-------LEVSFDLKTPLRAKPSYISISPSETYIAAGD  181 (287)
T ss_dssp             TTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTE-------EEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccc-------cceeeeeeeccCCceeEEEeccCcccccccc
Confidence            34567888888888889988889999999987 588987641       11122332 2348899999974  5688888


Q ss_pred             C-CeEEEEeCCCCcEEEE-EEecCCCCCceeEEEEeCC-----------EEEEEEcCCCeEEEEeCCc-cceeee
Q psy16020         80 K-NKIHVVDPKSLVVLKS-FDAHPRRESQVRQMTWAGD-----------GVWVSIRLDSTLRMYNAHT-YQHLQD  140 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~-~~~h~~~~~~I~~m~~~~~-----------~vwis~~~d~~l~lwd~~t-~~~l~~  140 (151)
                      . ++|++||..+++.... +.+|+.   .|+++.+.+.           ...+|++.|+.|++||.++ .+++..
T Consensus       182 ~dg~i~i~d~~~~~~~~~~~~~h~~---~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~  253 (287)
T d1pgua2         182 VMGKILLYDLQSREVKTSRWAFRTS---KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA  253 (287)
T ss_dssp             TTSCEEEEETTTTEEEECCSCCCSS---CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred             ccccccceeeccccccccccccccc---ccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEE
Confidence            5 5899999999987654 677864   8999987643           3578999999999999977 444443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.04  E-value=9.2e-09  Score=78.35  Aligned_cols=128  Identities=14%  Similarity=0.133  Sum_probs=91.7

Q ss_pred             eCCCceeeeEEeCC-eEEEEecCCcEEEEEcCCCC-----------CCCCCcceEEEeCCCCCceEEEeeeC--CEEEEE
Q psy16020         13 KILDTALPPVHVQG-RVVCALADGSVAIFRRGPDG-----------QWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG   78 (151)
Q Consensus        13 ~l~~~V~~i~~~~~-~v~vgl~nG~l~v~~~~~~~-----------~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g   78 (151)
                      ...++|.||.+.++ +.++..+||+|.+|+...+.           .++...........+..+|+++.+..  +.|.+|
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~  139 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG  139 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceec
Confidence            34589999999753 45555579999999875321           00111111111222347899999974  568877


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      +. +.|++||..+++....+.+|..   .|.++....++ ..++++.++.+++||.++.........
T Consensus       140 ~~dg~v~i~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~  203 (388)
T d1erja_         140 AEDRLIRIWDIENRKIVMILQGHEQ---DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI  203 (388)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             ccccccccccccccccccccccccc---cccccccccccccccccccceeeeeeecccccccccccc
Confidence            75 6899999999999999999975   89999998664 478899999999999998877776544

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=1.2e-08  Score=77.60  Aligned_cols=110  Identities=15%  Similarity=0.114  Sum_probs=76.8

Q ss_pred             CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEe----eeC-CEEEEEeC-CeEEEE
Q psy16020         16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLA----AVY-NKVWCGYK-NKIHVV   86 (151)
Q Consensus        16 ~~V~~i~~~~---~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~----~v~-~~Lw~g~~-n~I~vi   86 (151)
                      ..|.++.+.+   ..+.+|..||.|.+|+....     +  ..-.+..+..|+.++.    ..+ ..|..|+. +.|++|
T Consensus       206 ~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~-----~--~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iw  278 (325)
T d1pgua1         206 SFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG-----E--FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW  278 (325)
T ss_dssp             CCEEEEEECSTTCCEEEEEETTCCEEEEETTTC-----C--EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEE
T ss_pred             CccEEeeeccccceeccccccccceeeeeeccc-----c--ccccccccccccccceeeeeccCCCEEEEEeCCCeEEEE
Confidence            5799999875   34667889999999986421     1  1223443345554443    334 46777664 689999


Q ss_pred             eCCCCcEEEEEEecCCCCC-ceeEEEEeCCEEEEEEcCCCeEEEEeC
Q psy16020         87 DPKSLVVLKSFDAHPRRES-QVRQMTWAGDGVWVSIRLDSTLRMYNA  132 (151)
Q Consensus        87 d~~t~~i~~~~~~h~~~~~-~I~~m~~~~~~vwis~~~d~~l~lwd~  132 (151)
                      |.++++..+++..|..... ...++...+++.++|++.|+.|++||.
T Consensus       279 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         279 DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             ETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             ECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            9999999999998865311 123444456778899999999999984

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.97  E-value=2e-08  Score=74.33  Aligned_cols=119  Identities=9%  Similarity=0.087  Sum_probs=89.4

Q ss_pred             CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEEEEeCCC
Q psy16020         16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKS   90 (151)
Q Consensus        16 ~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~vid~~t   90 (151)
                      ..+.+.....  +.+.+|..||.|.+|+....       .....+..+..+|+++.+..  +.|.+|+. +.|++||..+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~-------~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~  257 (340)
T d1tbga_         185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREG-------MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA  257 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTEEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             eeEeeeccccccceeEEeecCceEEEEECCCC-------cEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc
Confidence            4555555543  35778899999999986421       11223444569999999973  56777775 6899999999


Q ss_pred             CcEEEEEEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         91 LVVLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        91 ~~i~~~~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .+....+... .....|..+.+++++ ..++++.|+.|++||..+++++..+.
T Consensus       258 ~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  309 (340)
T d1tbga_         258 DQELMTYSHD-NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA  309 (340)
T ss_dssp             TEEEEEECCT-TCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             cccccccccc-cccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEc
Confidence            9988887643 234579999999765 47889999999999999999998875

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=98.96  E-value=7.8e-08  Score=70.25  Aligned_cols=129  Identities=14%  Similarity=0.150  Sum_probs=91.5

Q ss_pred             CCCceeeeeeCCCceeeeEEeC--CeEEEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEE
Q psy16020          4 PHPTPYPLNKILDTALPPVHVQ--GRVVCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCG   78 (151)
Q Consensus         4 ~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g   78 (151)
                      .+.+.+..+.....+.++.+.+  +++|++..++ .+.++.... .    .....+..+.  .| +.+.+.  ++.+|++
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~--~~-~~~~~~~~g~~~~v~  217 (301)
T d1l0qa2         146 VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-N----SVIDTVKVEA--AP-SGIAVNPEGTKAYVT  217 (301)
T ss_dssp             TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-T----EEEEEEECSS--EE-EEEEECTTSSEEEEE
T ss_pred             cccceeeecccCCCceEEEeeccccceeeecccccccccccccc-e----eeeecccccC--Cc-ceeeccccccccccc
Confidence            3456677777777788887764  4688877664 455554431 1    1223334433  44 444443  4678776


Q ss_pred             e-C---CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         79 Y-K---NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        79 ~-~---n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      + +   +.|++||+.++++.+++..+.    .+..++++++|  +|++.+.|+.|++||++|++.++++.+.
T Consensus       218 ~~~~~~~~v~v~D~~t~~~~~~~~~~~----~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~vg  285 (301)
T d1l0qa2         218 NVDKYFNTVSMIDTGTNKITARIPVGP----DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVG  285 (301)
T ss_dssp             EECSSCCEEEEEETTTTEEEEEEECCS----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred             cccceeeeeeeeecCCCeEEEEEcCCC----CEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeCC
Confidence            5 2   579999999999999998764    68999998664  7889999999999999999999999763

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.96  E-value=8.4e-09  Score=76.30  Aligned_cols=122  Identities=15%  Similarity=0.095  Sum_probs=86.0

Q ss_pred             eeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeEE
Q psy16020         10 PLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIH   84 (151)
Q Consensus        10 ~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I~   84 (151)
                      ..+.....+.++.+.+  +.+++|..||.|.+|+....      ....+....++.+|++|.+..  +.|.+|+. ++|+
T Consensus       131 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  204 (299)
T d1nr0a2         131 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGA------SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVI  204 (299)
T ss_dssp             EEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETT------EEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             cccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccc
Confidence            3444455667776654  46889999999999987421      112222222348999999974  56777775 5899


Q ss_pred             EEeCCCCcEEE---EEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeee
Q psy16020         85 VVDPKSLVVLK---SFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        85 vid~~t~~i~~---~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      +||..+.+...   .+.+|.+   .|+++.+++++- +++++.|+.|++||.++.+....
T Consensus       205 ~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~  261 (299)
T d1nr0a2         205 PYSVANNFELAHTNSWTFHTA---KVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPI  261 (299)
T ss_dssp             EEEGGGTTEESCCCCCCCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCE
T ss_pred             ccccccccccccccccccccc---ccccccccccccceEEEcCCCEEEEEECCCCCcceE
Confidence            99998876543   4555654   899999987654 77899999999999998655443

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=1.8e-08  Score=73.75  Aligned_cols=121  Identities=11%  Similarity=0.146  Sum_probs=85.5

Q ss_pred             eCC-CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--C-EEEEEe-CCeEEE
Q psy16020         13 KIL-DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWCGY-KNKIHV   85 (151)
Q Consensus        13 ~l~-~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~-~Lw~g~-~n~I~v   85 (151)
                      +=| +.|.+|.+.+  +.|.+|..||+|.+|+......    .........+..||.|+.+.+  + .|..|+ ++.|.+
T Consensus         8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~----~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~   83 (342)
T d1yfqa_           8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCc----ceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence            344 6899999974  4788999999999999753221    112222222459999999863  4 466666 468999


Q ss_pred             EeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         86 VDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      ||..+.........+.. ..........+....++++.+..+++||.++.+..
T Consensus        84 w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~  135 (342)
T d1yfqa_          84 VDLIGSPSFQALTNNEA-NLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDG  135 (342)
T ss_dssp             ECSSSSSSEEECBSCCC-CSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTB
T ss_pred             eeccccccccccccccc-ccccccccccccccccccccccccceeeccccccc
Confidence            99999888777776543 23344444556777899999999999998865433

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.84  E-value=4.4e-08  Score=75.46  Aligned_cols=121  Identities=12%  Similarity=0.009  Sum_probs=86.4

Q ss_pred             eeeeeeC-CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeCC-
Q psy16020          8 PYPLNKI-LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKN-   81 (151)
Q Consensus         8 ~l~~i~l-~~~V~~i~~~--~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n-   81 (151)
                      +++.++= .++|.+|.+.  ++++..|..||+|.+|+... +.    ....+.+..+..+|+||.+.  ++.+.+|+++ 
T Consensus        43 ~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~-~~----~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~  117 (371)
T d1k8kc_          43 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG-RT----WKPTLVILRINRAARCVRWAPNEKKFAVGSGSR  117 (371)
T ss_dssp             EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET-TE----EEEEEECCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc-cc----cccccccccccccccccccccccccceeecccC
Confidence            4455542 4799999987  45788899999999998752 11    12344555556899999996  3678888864 


Q ss_pred             eEEEEeCCCCcEEEE----EEecCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccc
Q psy16020         82 KIHVVDPKSLVVLKS----FDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        82 ~I~vid~~t~~i~~~----~~~h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~  136 (151)
                      .|.+|+.+.......    ...|.   ..|.++.+++++ ..++++.|+.+++||....+
T Consensus       118 ~i~i~~~~~~~~~~~~~~~~~~~~---~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~  174 (371)
T d1k8kc_         118 VISICYFEQENDWWVCKHIKKPIR---STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKE  174 (371)
T ss_dssp             SEEEEEEETTTTEEEEEEECTTCC---SCEEEEEECTTSSEEEEEETTSCEEEEECCCTT
T ss_pred             cceeeeeecccccccccccccccc---cccccccccccccceeccccCcEEEEEeeccCc
Confidence            688887665443222    23343   489999998765 47889999999999987644

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=98.82  E-value=2e-07  Score=67.95  Aligned_cols=108  Identities=15%  Similarity=0.172  Sum_probs=84.1

Q ss_pred             CeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEEEeCCCCcEEEEEEec
Q psy16020         26 GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        26 ~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~t~~i~~~~~~h  100 (151)
                      .++||+. .||+|.+|+....     +..+.++++.  .| +.+++..  ++||++.  +++|++||.++++..+++..+
T Consensus         2 ~~~yV~~~~~~~v~v~D~~t~-----~~~~~i~~g~--~p-~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~   73 (301)
T d1l0qa2           2 TFAYIANSESDNISVIDVTSN-----KVTATIPVGS--NP-MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG   73 (301)
T ss_dssp             EEEEEEETTTTEEEEEETTTT-----EEEEEEECSS--SE-EEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred             eEEEEEECCCCEEEEEECCCC-----eEEEEEECCC--Cc-eEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc
Confidence            3788865 6789999987522     3445677775  55 6777763  5688766  369999999999999999987


Q ss_pred             CCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020        101 PRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus       101 ~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      .    .+..+.++.+  .++++...+..+++||..+.+....++...
T Consensus        74 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (301)
T d1l0qa2          74 S----SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK  116 (301)
T ss_dssp             S----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred             c----cccccccccccccccccccccceeeecccccceeeeeccccc
Confidence            5    5677888754  468889999999999999999999887554

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.60  E-value=3.1e-07  Score=71.13  Aligned_cols=114  Identities=14%  Similarity=0.257  Sum_probs=79.7

Q ss_pred             CeEEEEecCCcEEEEEcCCCCC------CCCCcceE--EEeC---CCCCceEEEeeeC-CEEEEEeC-CeEEEEeCCCCc
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQ------WDLSKYHT--VTLG---LPHHSVRSLAAVY-NKVWCGYK-NKIHVVDPKSLV   92 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~------wd~~~~~~--i~l~---~~~~pV~~m~~v~-~~Lw~g~~-n~I~vid~~t~~   92 (151)
                      +++..+..||++.+|+....+.      -.......  -...   .+...+.|+.+.+ +.|..|+. +.|++||.++++
T Consensus       137 ~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~  216 (393)
T d1sq9a_         137 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR  216 (393)
T ss_dssp             EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE
T ss_pred             cEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccc
Confidence            3577888899999998753210      00011111  1111   2236688999875 46777775 589999999999


Q ss_pred             EEEEEE------ecCCCCCceeEEEEeCCEE-EEEEcCCC---eEEEEeCCccceeeeEe
Q psy16020         93 VLKSFD------AHPRRESQVRQMTWAGDGV-WVSIRLDS---TLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        93 i~~~~~------~h~~~~~~I~~m~~~~~~v-wis~~~d~---~l~lwd~~t~~~l~~id  142 (151)
                      ...+++      +|++   .|+++++++++- +++++.|+   .|++||++++++++.+.
T Consensus       217 ~~~~~~~~~~l~~h~~---~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~  273 (393)
T d1sq9a_         217 PLYNFESQHSMINNSN---SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS  273 (393)
T ss_dssp             EEEEEECCC---CCCC---CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred             cccccccccccccccc---eEEEcccccccceeeeecCCCCcceeeecccccceeeeeec
Confidence            887766      4543   899999997654 77888776   59999999999888875

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.54  E-value=5.7e-06  Score=65.56  Aligned_cols=136  Identities=11%  Similarity=0.047  Sum_probs=96.7

Q ss_pred             CCCCceeeeeeCCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEee----e--CCE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA----V--YNK   74 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~~--~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~----v--~~~   74 (151)
                      ..+.+++..++....|..+.+.++  ++|++..||++.+|+...+.   ......++.+.  .| +.++.    .  +++
T Consensus        49 ~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~---~~~~~~i~~~~--~~-~~~~~s~~~SpDG~~  122 (432)
T d1qksa2          49 GSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE---PTTVAEIKIGS--EA-RSIETSKMEGWEDKY  122 (432)
T ss_dssp             TTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS---CCEEEEEECCS--EE-EEEEECCSTTCTTTE
T ss_pred             CCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCC---ceEEEEEecCC--CC-CCeEEecccCCCCCE
Confidence            467899999999999999999854  89999999999999975321   11223455554  33 23332    2  357


Q ss_pred             EEEEe--CCeEEEEeCCCCcEEEEEEecCCC--------CCceeEEEEeCC--EEEEEEcCCCeEEEEeCCcccee--ee
Q psy16020         75 VWCGY--KNKIHVVDPKSLVVLKSFDAHPRR--------ESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHL--QD  140 (151)
Q Consensus        75 Lw~g~--~n~I~vid~~t~~i~~~~~~h~~~--------~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~t~~~l--~~  140 (151)
                      |++++  ++.|.+||.+++++.+.+..|...        ......+..+++  ..+++...++.+.+||..+.+.+  .+
T Consensus       123 l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~  202 (432)
T d1qksa2         123 AIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE  202 (432)
T ss_dssp             EEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE
T ss_pred             EEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEE
Confidence            88765  479999999999999999876421        234555666643  35678999999999999887654  44


Q ss_pred             EeCC
Q psy16020        141 VDIE  144 (151)
Q Consensus       141 idi~  144 (151)
                      |...
T Consensus       203 i~~g  206 (432)
T d1qksa2         203 ISAE  206 (432)
T ss_dssp             EECC
T ss_pred             Eccc
Confidence            5443

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.53  E-value=1.1e-06  Score=64.52  Aligned_cols=117  Identities=8%  Similarity=0.079  Sum_probs=81.9

Q ss_pred             CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEe--CCeEEEEeCCCCcEEEEEEecC
Q psy16020         26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKIHVVDPKSLVVLKSFDAHP  101 (151)
Q Consensus        26 ~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~--~n~I~vid~~t~~i~~~~~~h~  101 (151)
                      ++++++..||+|.||+...     .+..+.+++......+..+++..  +.||+++  +++|++||++|++..+++..+.
T Consensus         2 ~~~vt~~~d~~v~v~D~~s-----~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~   76 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEK-----MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST   76 (337)
T ss_dssp             EEEEEEETTTEEEEEETTT-----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred             eEEEEEcCCCEEEEEECCC-----CeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCC
Confidence            5789999999999998753     23445567654324456777763  5688664  3689999999999999998764


Q ss_pred             CC--CCceeEEEEeCCE--EEEEE-----------cCCCeEEEEeCCccceeeeEeCCccc
Q psy16020        102 RR--ESQVRQMTWAGDG--VWVSI-----------RLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus       102 ~~--~~~I~~m~~~~~~--vwis~-----------~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      ..  ...+..+++++++  ++++.           ..++.+.+||..+.+.+..+.....+
T Consensus        77 ~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  137 (337)
T d1pbyb_          77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI  137 (337)
T ss_dssp             TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC
T ss_pred             CcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCc
Confidence            32  1234566666443  33332           25788999999999999888765443

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.47  E-value=3e-06  Score=62.19  Aligned_cols=63  Identities=19%  Similarity=0.145  Sum_probs=52.6

Q ss_pred             EEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020         77 CGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus        77 ~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      ++..+.|.+||+++++..+++...    ..+.+|+++++|- .++++.++.|++||++++|.+.+|++
T Consensus       256 ~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         256 FGAYNVLESFDLEKNASIKRVPLP----HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             EEEESEEEEEETTTTEEEEEEECS----SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred             EEccccEEEEECCCCcEEEEEcCC----CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence            344689999999999999998743    3789999996654 44678899999999999999999975

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.41  E-value=6.2e-06  Score=59.70  Aligned_cols=122  Identities=11%  Similarity=0.118  Sum_probs=79.2

Q ss_pred             ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee---CCEEEEEe-CCeEEEEeCCCCc
Q psy16020         17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGY-KNKIHVVDPKSLV   92 (151)
Q Consensus        17 ~V~~i~~~~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v---~~~Lw~g~-~n~I~vid~~t~~   92 (151)
                      ...++....+.++.|..||.|.+|+......    .............+++....   +..+.+++ ++++.+++.....
T Consensus       152 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~  227 (342)
T d1yfqa_         152 KIFTMDTNSSRLIVGMNNSQVQWFRLPLCED----DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG  227 (342)
T ss_dssp             CEEEEEECSSEEEEEESTTEEEEEESSCCTT----CCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred             eeeeeeccCCceeeecCCCcEEEEecccCcc----cceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCc
Confidence            4455666778899999999999999864322    11122222223556665554   24577776 4688888765322


Q ss_pred             ------EEEEEEe------cCCCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         93 ------VLKSFDA------HPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        93 ------i~~~~~~------h~~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                            ....+..      +......|+++.+++++ .++|++.|+.|++||.++.+.+..+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~  290 (342)
T d1yfqa_         228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA  290 (342)
T ss_dssp             CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred             ceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEec
Confidence                  1112221      11223368999999654 48999999999999999999988774

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.39  E-value=3.3e-06  Score=62.65  Aligned_cols=106  Identities=12%  Similarity=0.040  Sum_probs=80.9

Q ss_pred             CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC-C-EEEE-EeCC--eEEEEeCCCCcEEEEEEe
Q psy16020         25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N-KVWC-GYKN--KIHVVDPKSLVVLKSFDA   99 (151)
Q Consensus        25 ~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~-~-~Lw~-g~~n--~I~vid~~t~~i~~~~~~   99 (151)
                      +++.++..++|+|.+|+..        ....++++. ..+|+++.+.. + .|.. |.++  .|++||.++++.++ +..
T Consensus        14 dG~~~a~~~~g~v~v~d~~--------~~~~~~~~~-~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~-~~~   83 (360)
T d1k32a3          14 DGDLIAFVSRGQAFIQDVS--------GTYVLKVPE-PLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEE   83 (360)
T ss_dssp             GGGCEEEEETTEEEEECTT--------SSBEEECSC-CSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCC
T ss_pred             CCCEEEEEECCeEEEEECC--------CCcEEEccC-CCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE-eeC
Confidence            4677888889999998653        224556763 58999999974 3 4654 4443  79999999988764 455


Q ss_pred             cCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        100 HPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       100 h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      |..   .|.++.+++++- +++++.+..+++||..+.+....+..
T Consensus        84 ~~~---~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~  125 (360)
T d1k32a3          84 NLG---NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS  125 (360)
T ss_dssp             CCC---SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCc---eEEeeeecccccccceeccccccccccccccceeeeeec
Confidence            654   899999998764 78899999999999999888777653

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.30  E-value=1.4e-05  Score=60.09  Aligned_cols=59  Identities=15%  Similarity=0.123  Sum_probs=51.0

Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         80 KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        80 ~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      ++.|.+||..+++..+++...    ..+..|+++++|   ++++.+.|+.|++||+.|++.++.|+
T Consensus       297 ~~~v~~~d~~t~~~~~~~~~~----~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~  358 (373)
T d2madh_         297 AKEVTSVTGLVGQTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV  358 (373)
T ss_pred             CCeEEEEECCCCcEEEEecCC----CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEC
Confidence            468999999999999998743    378899998664   46789999999999999999999996

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.30  E-value=2.9e-06  Score=62.49  Aligned_cols=78  Identities=12%  Similarity=0.089  Sum_probs=61.1

Q ss_pred             CceEEEeee--CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE-EEEEcCCCeEEEEeCCccceee
Q psy16020         63 HSVRSLAAV--YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV-WVSIRLDSTLRMYNAHTYQHLQ  139 (151)
Q Consensus        63 ~pV~~m~~v--~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v-wis~~~d~~l~lwd~~t~~~l~  139 (151)
                      ..+.+....  +..++.+..+.|++||+.+++..+.++..    ..+.+|+++++|- .++++.|+.|++||++|++.+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~----~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~  327 (346)
T d1jmxb_         252 ELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLD----HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK  327 (346)
T ss_dssp             SCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECS----SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred             ceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCC----CCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEE
Confidence            444444443  24466666789999999999999998843    2688999997654 5567889999999999999999


Q ss_pred             eEeCC
Q psy16020        140 DVDIE  144 (151)
Q Consensus       140 ~idi~  144 (151)
                      +|++-
T Consensus       328 ~i~~p  332 (346)
T d1jmxb_         328 NIKLP  332 (346)
T ss_dssp             EEECS
T ss_pred             EEECC
Confidence            99863

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.29  E-value=1.7e-06  Score=64.69  Aligned_cols=112  Identities=15%  Similarity=0.168  Sum_probs=72.8

Q ss_pred             eEEEEecCCcEEEEEcCCCCC--CCCCc---ceEEEeCCCCCceEEEeee--CCEEEEEeC-----------CeEEEEeC
Q psy16020         27 RVVCALADGSVAIFRRGPDGQ--WDLSK---YHTVTLGLPHHSVRSLAAV--YNKVWCGYK-----------NKIHVVDP   88 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~--wd~~~---~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-----------n~I~vid~   88 (151)
                      ++..+..+|.+.+++...+..  ++...   ......+........+...  +..+|++..           +.|.+||+
T Consensus       208 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~  287 (355)
T d2bbkh_         208 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA  287 (355)
T ss_dssp             EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             eEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeC
Confidence            455566688888887754321  11100   0000010000112223333  466776541           47999999


Q ss_pred             CCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020         89 KSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        89 ~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .+++..++++.+.    .+.+++++++|   ++++.+.|+.|++||++|++.+++|+
T Consensus       288 ~t~~~~~~~~~~~----~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~  340 (355)
T d2bbkh_         288 KTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN  340 (355)
T ss_dssp             TTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             CCCcEEEEecCCC----CEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence            9999999998653    68899998664   57788899999999999999999985

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.29  E-value=1.7e-05  Score=58.70  Aligned_cols=120  Identities=7%  Similarity=-0.040  Sum_probs=86.1

Q ss_pred             eeeCCCceeeeEEeCC--eE-EEEecCC-cEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC-CeE
Q psy16020         11 LNKILDTALPPVHVQG--RV-VCALADG-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKI   83 (151)
Q Consensus        11 ~i~l~~~V~~i~~~~~--~v-~vgl~nG-~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~-n~I   83 (151)
                      ++.-+..|.++.+.++  ++ ++|..+| .|.+|+..        ......+..+..+|+++.+..  +.|.++++ +.+
T Consensus        38 ~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~--------~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~  109 (360)
T d1k32a3          38 KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYR--------TGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEI  109 (360)
T ss_dssp             ECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETT--------TCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred             EccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECC--------CCcEEEeeCCCceEEeeeecccccccceecccccc
Confidence            3455679999999765  44 4455554 57777653        222334544558999999974  56777765 689


Q ss_pred             EEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEE-----------EcCCCeEEEEeCCccceeeeE
Q psy16020         84 HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVS-----------IRLDSTLRMYNAHTYQHLQDV  141 (151)
Q Consensus        84 ~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis-----------~~~d~~l~lwd~~t~~~l~~i  141 (151)
                      ++||.++++..+.+..|..   .+.++.++++|-+++           ...+..+++||..+.+..+..
T Consensus       110 ~~~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~  175 (360)
T d1k32a3         110 MTVDLETGKPTVIERSREA---MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT  175 (360)
T ss_dssp             EEEETTTCCEEEEEECSSS---CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred             ccccccccceeeeeecccc---cccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeec
Confidence            9999999999999998864   788888887776654           234567999999987765543

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.25  E-value=3e-05  Score=60.43  Aligned_cols=107  Identities=10%  Similarity=0.027  Sum_probs=75.3

Q ss_pred             eEEE-EecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-CeEEEEeCCCCcEEEEEEecCC
Q psy16020         27 RVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-NKIHVVDPKSLVVLKSFDAHPR  102 (151)
Q Consensus        27 ~v~v-gl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-n~I~vid~~t~~i~~~~~~h~~  102 (151)
                      .++| +..||+|.+|+...     .+....++.+.   .++.+++.  +++||+++. +.|.+||.+|++.+...+....
T Consensus        33 ~~~V~~~~dg~v~vwD~~t-----~~~~~~l~~g~---~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~  104 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDS-----KKIVKVIDTGY---AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG  104 (426)
T ss_dssp             EEEEEETTTTEEEEEETTT-----CSEEEEEECCS---SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred             EEEEEEcCCCEEEEEECCC-----CcEEEEEeCCC---CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCC
Confidence            3445 55689999998752     23445667664   36888887  467999885 6899999999986665543221


Q ss_pred             CCCceeEEEEe------CCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        103 RESQVRQMTWA------GDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       103 ~~~~I~~m~~~------~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                        .....++.+      |..++++...++.+++||..+.++++.+..
T Consensus       105 --~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~  149 (426)
T d1hzua2         105 --IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST  149 (426)
T ss_dssp             --SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred             --CCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeec
Confidence              133444443      445778888999999999999998887753

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=9.2e-06  Score=59.74  Aligned_cols=111  Identities=11%  Similarity=0.086  Sum_probs=74.8

Q ss_pred             eEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC--CeEEEEeCCCCcEEEEEEecC
Q psy16020         27 RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKSLVVLKSFDAHP  101 (151)
Q Consensus        27 ~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~  101 (151)
                      .|||+. .+++|.+|+.+..+.     .+.++.-....+++.|++..  +.||+++.  +.|.+|+..+.....++..+.
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~-----l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~   79 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGA-----LTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES   79 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSC-----EEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred             EEEEECCCCCcEEEEEEcCCCC-----eEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeec
Confidence            577877 778999999875442     23333222236788999874  57998884  689998877554333333333


Q ss_pred             CCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEe
Q psy16020        102 RRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus       102 ~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~id  142 (151)
                      .....+.++.++++|  ++++...+..+++|+.........+.
T Consensus        80 ~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~  122 (333)
T d1ri6a_          80 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD  122 (333)
T ss_dssp             ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE
T ss_pred             ccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceeccc
Confidence            333467889999664  56777789999999988766555543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.23  E-value=5.3e-06  Score=65.74  Aligned_cols=107  Identities=8%  Similarity=0.001  Sum_probs=73.2

Q ss_pred             EEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-CCeEEEEeCCCCc--EEEEEEecCCC
Q psy16020         29 VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-KNKIHVVDPKSLV--VLKSFDAHPRR  103 (151)
Q Consensus        29 ~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-~n~I~vid~~t~~--i~~~~~~h~~~  103 (151)
                      .+.-.+|+|.+|+...     .+....++.|.   .+..+.+.  ++.+|+++ ++.|.+||.+|++  ...++..-...
T Consensus        36 v~~~d~g~v~v~D~~t-----~~v~~~~~~g~---~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~  107 (432)
T d1qksa2          36 VTLRDAGQIALIDGST-----YEIKTVLDTGY---AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA  107 (432)
T ss_dssp             EEETTTTEEEEEETTT-----CCEEEEEECSS---CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred             EEEcCCCEEEEEECCC-----CcEEEEEeCCC---CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCC
Confidence            4555678999998752     23445667663   46788887  46799888 4799999998877  44444432211


Q ss_pred             CCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccceeeeEeC
Q psy16020        104 ESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDI  143 (151)
Q Consensus       104 ~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~~l~~idi  143 (151)
                      ...+....++  |..++++...++.+++||+.+.++++.+..
T Consensus       108 ~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~  149 (432)
T d1qksa2         108 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST  149 (432)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred             CCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeecc
Confidence            1123333333  445788999999999999999999988753

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.15  E-value=1e-05  Score=59.38  Aligned_cols=69  Identities=19%  Similarity=0.105  Sum_probs=56.8

Q ss_pred             EEEEEe-CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         74 KVWCGY-KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        74 ~Lw~g~-~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      .|.++. +++|+|||++|+++.+++..+..  ..+..++++++|  ++++...++.|++||..+++.+..++..
T Consensus        10 ~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~--~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_          10 YMIVTNYPNNLHVVDVASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEEEEcCCC--CCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            466666 47999999999999999985432  367889998664  6789999999999999999999888754

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.05  E-value=0.00017  Score=56.01  Aligned_cols=131  Identities=8%  Similarity=0.006  Sum_probs=84.3

Q ss_pred             CCCCceeeeeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCC-CCCceEEEeee--CCEEEE
Q psy16020          3 YPHPTPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAV--YNKVWC   77 (151)
Q Consensus         3 ~~~~~~l~~i~l~~~V~~i~~~~--~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~-~~~pV~~m~~v--~~~Lw~   77 (151)
                      ..+.++++.++....+..|.+.+  +++|++..||+|.+|+.....   ......++.+. +...+.++.+.  +++|++
T Consensus        49 ~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~---~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v  125 (426)
T d1hzua2          49 GDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE---PTKVAEIKIGIEARSVESSKFKGYEDRYTIA  125 (426)
T ss_dssp             TTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSS---CEEEEEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred             CCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCc---eeEEEEEeCCCCCcceEEeeeecCCCCEEEE
Confidence            45789999999999999999974  479999999999999875321   11112334442 11122222222  467888


Q ss_pred             Ee--CCeEEEEeCCCCcEEEEEEecCCC--------CCceeEEEEe--CCEEEEEEcCCCeEEEEeCCccc
Q psy16020         78 GY--KNKIHVVDPKSLVVLKSFDAHPRR--------ESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        78 g~--~n~I~vid~~t~~i~~~~~~h~~~--------~~~I~~m~~~--~~~vwis~~~d~~l~lwd~~t~~  136 (151)
                      ++  ++.+.+||.+++++.+.+..|...        +.....+..+  +..+|.+....+.+.+++....+
T Consensus       126 ~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~  196 (426)
T d1hzua2         126 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID  196 (426)
T ss_dssp             EEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSS
T ss_pred             eecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEecccc
Confidence            87  468999999999999998877531        1122333333  33445666666666666665544

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.92  E-value=1.4e-05  Score=60.87  Aligned_cols=70  Identities=13%  Similarity=0.107  Sum_probs=57.9

Q ss_pred             eCCEEEEEe----------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE---EEEEEcCCCeEEEEeCCccce
Q psy16020         71 VYNKVWCGY----------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQH  137 (151)
Q Consensus        71 v~~~Lw~g~----------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~---vwis~~~d~~l~lwd~~t~~~  137 (151)
                      .++.+|+..          +++|.+||+.|++..+++...    ..+..+.++++|   ++++.+.++.|++||+.|++.
T Consensus       274 ~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~----~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~  349 (368)
T d1mdah_         274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG----HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE----EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred             CCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCC----CceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            357788764          146999999999999998865    278889998664   578999999999999999999


Q ss_pred             eeeEeCC
Q psy16020        138 LQDVDIE  144 (151)
Q Consensus       138 l~~idi~  144 (151)
                      ++.|++-
T Consensus       350 ~~~i~~g  356 (368)
T d1mdah_         350 QSSVELD  356 (368)
T ss_dssp             EEECCCC
T ss_pred             EEEEECC
Confidence            9999764

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=97.75  E-value=7.9e-05  Score=55.81  Aligned_cols=78  Identities=12%  Similarity=0.115  Sum_probs=59.3

Q ss_pred             CCceEEEeee--CCEEEEEe------CCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEE--EEEE---------c
Q psy16020         62 HHSVRSLAAV--YNKVWCGY------KNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGV--WVSI---------R  122 (151)
Q Consensus        62 ~~pV~~m~~v--~~~Lw~g~------~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~v--wis~---------~  122 (151)
                      ..|++++++.  +.++|+..      .++|+|||++|+++..++.++..     ..++++++|-  +++.         .
T Consensus        20 ~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~-----~~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          20 DGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-----PNPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             CCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCC-----ccEEEcCCCCEEEEEeecCCcccccc
Confidence            4788888886  46788863      25799999999999999987753     2567776654  3332         4


Q ss_pred             CCCeEEEEeCCccceeeeEeCC
Q psy16020        123 LDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus       123 ~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      +++.|++||+.+++++.++...
T Consensus        95 ~~~~v~v~D~~t~~~~~~~~~~  116 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIADIELP  116 (373)
T ss_pred             cceEEEEEECCCCcEEEEEecC
Confidence            5688999999999999988643

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.69  E-value=0.00037  Score=51.38  Aligned_cols=113  Identities=10%  Similarity=0.044  Sum_probs=77.0

Q ss_pred             eCCeEEEEe-----cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         24 VQGRVVCAL-----ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        24 ~~~~v~vgl-----~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      .+.++|++.     .+++|.+|+...+     +....++.|.  .|  .+++.  ++.||+++           .+.|.+
T Consensus        12 dg~~~~v~~~~~~~~~~~v~v~D~~tg-----~~~~~~~~g~--~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v   82 (355)
T d2bbkh_          12 DARRVYVNDPAHFAAVTQQFVIDGEAG-----RVIGMIDGGF--LP--NPVVADDGSFIAHASTVFSRIARGERTDYVEV   82 (355)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETTTT-----EEEEEEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCEEEEEecccCCCcCeEEEEECCCC-----cEEEEEECCC--CC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEE
Confidence            456788864     3456888886532     2334566665  55  45665  45688764           257999


Q ss_pred             EeCCCCcEEEEEEecCCCCC----ceeEEEEeCCE--EEE-EEcCCCeEEEEeCCccceeeeEeCCc
Q psy16020         86 VDPKSLVVLKSFDAHPRRES----QVRQMTWAGDG--VWV-SIRLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~~~----~I~~m~~~~~~--vwi-s~~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ||+.+++..+++..+.....    ....+.+++++  +++ +...+..+.+||..+.+.++.+....
T Consensus        83 ~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (355)
T d2bbkh_          83 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD  149 (355)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred             EECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCC
Confidence            99999999999987654322    23456677554  433 34667899999999999999887643

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=0.0015  Score=47.31  Aligned_cols=125  Identities=12%  Similarity=0.095  Sum_probs=81.9

Q ss_pred             ceeeeeeCCCceeeeEEeCC--eEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEeC-
Q psy16020          7 TPYPLNKILDTALPPVHVQG--RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK-   80 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~~--~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~-   80 (151)
                      +.++.+..+..|.+|.+.++  +||++.. ||.|.+|+...++ +.+........+.  .| ..+++.  ++.|++++. 
T Consensus        28 ~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~-~~~~~~~~~~~~~--~p-~~l~~spDg~~l~v~~~~  103 (333)
T d1ri6a_          28 TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD-GALTFAAESALPG--SL-THISTDHQGQFVFVGSYN  103 (333)
T ss_dssp             EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEEEEEEECSS--CC-SEEEECTTSSEEEEEETT
T ss_pred             EEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCC-CcEEEeeecccCC--Cc-eEEEEcCCCCEEeecccC
Confidence            45566778899999999765  6888876 7999999986432 1111212233332  34 467776  367998873 


Q ss_pred             -CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeC--CEEEEEEcCCCeEEEEeCCccc
Q psy16020         81 -NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        81 -n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~--~~vwis~~~d~~l~lwd~~t~~  136 (151)
                       ++|.+++.+............ ....++.+.+++  ..++.+...+..+.+|+..+..
T Consensus       104 ~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~  161 (333)
T d1ri6a_         104 AGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG  161 (333)
T ss_dssp             TTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             CCceeeeccccccceecccccC-CCccceEEEeeecceeeeccccccceeeEEEeccCC
Confidence             489888887766555444221 123577777774  4567777788899999987643

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.24  E-value=0.0027  Score=47.66  Aligned_cols=112  Identities=11%  Similarity=0.000  Sum_probs=73.6

Q ss_pred             eCCeEEEEec---CCc--EEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe-----------CCeEEE
Q psy16020         24 VQGRVVCALA---DGS--VAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV   85 (151)
Q Consensus        24 ~~~~v~vgl~---nG~--l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~-----------~n~I~v   85 (151)
                      ...+.|+...   +|+  |.+++...     .+....+..+.  .|.  +++.  +..||++.           .+.|.+
T Consensus        30 ~~~~~~v~~~~~~~g~~~~~~~d~~~-----~~~~~~~~~~~--~~~--~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v  100 (368)
T d1mdah_          30 ISRRSHITLPAYFAGTTENWVSCAGC-----GVTLGHSLGAF--LSL--AVAGHSGSDFALASTSFARSAKGKRTDYVEV  100 (368)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTT-----TEEEEEEEECT--TCE--EEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred             CCcceeEEeeccCCCcceEEEEeCCC-----CcEEEEEeCCC--CCc--ceECCCCCEEEEEcccCccccccccCCeEEE
Confidence            3456666653   344  44555431     12334455555  553  4444  35688865           246999


Q ss_pred             EeCCCCcEEEEEEecCCC----CCceeEEEEeCCE--EEEEEcCCCeEEEEeCCccceeeeEeCC
Q psy16020         86 VDPKSLVVLKSFDAHPRR----ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE  144 (151)
Q Consensus        86 id~~t~~i~~~~~~h~~~----~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t~~~l~~idi~  144 (151)
                      ||+.|++....+..+...    ......++++++|  ++++-..++.+.+||+.+.+.+..++..
T Consensus       101 ~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~  165 (368)
T d1mdah_         101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA  165 (368)
T ss_dssp             ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS
T ss_pred             EECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeecc
Confidence            999999999999876432    1223457778665  5666667899999999999999998764

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.23  E-value=0.0014  Score=49.46  Aligned_cols=103  Identities=7%  Similarity=0.081  Sum_probs=70.6

Q ss_pred             eEEEEe-cCCcEEEEEcCCCCCCCCCcceEE-EeCCCC-CceEEEee-eCCEEEEEe--CCeEEEEeCCCCcEEEEEEec
Q psy16020         27 RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTV-TLGLPH-HSVRSLAA-VYNKVWCGY--KNKIHVVDPKSLVVLKSFDAH  100 (151)
Q Consensus        27 ~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i-~l~~~~-~pV~~m~~-v~~~Lw~g~--~n~I~vid~~t~~i~~~~~~h  100 (151)
                      .+|++- .++.|..|+...+|.  +...+.+ .+.... .--..|++ .+++||++.  +++|++||+++++.+..+...
T Consensus       189 ~lyv~d~~~~~i~~~d~~~~g~--~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p  266 (314)
T d1pjxa_         189 QLIVAETPTKKLWSYDIKGPAK--IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP  266 (314)
T ss_dssp             EEEEEETTTTEEEEEEEEETTE--EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS
T ss_pred             EEEEEeecccceEEeeccCccc--cceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECC
Confidence            578774 567788887764442  1222222 232211 11245666 357899998  479999999999988888765


Q ss_pred             CCCCCceeEEEEeCCE--EEEEEcCCCeEEEEeCCc
Q psy16020        101 PRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT  134 (151)
Q Consensus       101 ~~~~~~I~~m~~~~~~--vwis~~~d~~l~lwd~~t  134 (151)
                      .   ...+++++.+++  +|++.+.++.|.-+++..
T Consensus       267 ~---~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         267 F---EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             S---SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             C---CCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            3   378899998654  899999999999998763

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.16  E-value=0.0036  Score=51.16  Aligned_cols=141  Identities=10%  Similarity=-0.048  Sum_probs=88.4

Q ss_pred             CCceeeeeeCCCc--e-eeeEEeCCeEEEEec-CCcEEEEEcCCCC--CCCCCcceEEEe---CCCCCceEEEeeeCCEE
Q psy16020          5 HPTPYPLNKILDT--A-LPPVHVQGRVVCALA-DGSVAIFRRGPDG--QWDLSKYHTVTL---GLPHHSVRSLAAVYNKV   75 (151)
Q Consensus         5 ~~~~l~~i~l~~~--V-~~i~~~~~~v~vgl~-nG~l~v~~~~~~~--~wd~~~~~~i~l---~~~~~pV~~m~~v~~~L   75 (151)
                      .=+..|+.++++.  + ..=...++.||++.+ +|.|..++-...|  .|.++.......   ......-|.+++.+++|
T Consensus        39 ~L~~aW~~~~g~~~~~~~tP~v~~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~~~~i  118 (571)
T d2ad6a1          39 NVKAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQI  118 (571)
T ss_dssp             GCEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEE
T ss_pred             hceEEEEEeCCCCCCcccCCEEECCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceeeCCeE
Confidence            3356688887641  1 112346889999997 6899888853223  465432211110   00011225677889999


Q ss_pred             EEEeC-CeEEEEeCCCCcEEEEEEecCC-CCCcee-EEEEeCCEEEEEEcC-----CCeEEEEeCCccceeeeEeCCc
Q psy16020         76 WCGYK-NKIHVVDPKSLVVLKSFDAHPR-RESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        76 w~g~~-n~I~vid~~t~~i~~~~~~h~~-~~~~I~-~m~~~~~~vwis~~~-----d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      ++++. ++++.+|++|+++.-++..... ....++ .-.+.++.|.+..+.     ++.|+-+|+.|++.+-..+.-+
T Consensus       119 ~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~  196 (571)
T d2ad6a1         119 VKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATG  196 (571)
T ss_dssp             EEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred             EEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEeccC
Confidence            99995 6999999999999877764311 001111 112336676665553     7789999999999999887554

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.85  E-value=0.0029  Score=51.65  Aligned_cols=139  Identities=13%  Similarity=0.053  Sum_probs=84.8

Q ss_pred             ceeeeeeCCC--ceee-eEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEE--eCCCCCce-EEEeeeCCEEEEEe
Q psy16020          7 TPYPLNKILD--TALP-PVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVT--LGLPHHSV-RSLAAVYNKVWCGY   79 (151)
Q Consensus         7 ~~l~~i~l~~--~V~~-i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~--l~~~~~pV-~~m~~v~~~Lw~g~   79 (151)
                      +..|+.++++  .+.+ =...++.||++.++|.|..++...+. .|.++......  ......++ +.+++.+++++++.
T Consensus        56 ~~aW~~~~~~~~~~~stPiv~~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t  135 (573)
T d1kb0a2          56 GLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA  135 (573)
T ss_dssp             EEEEEEECCCCSCCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC
T ss_pred             eEEEEEECCCCCCcEECCEEECCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEe
Confidence            4467777774  2322 13468899999999999999876432 46433210000  00001122 44566789999998


Q ss_pred             C-CeEEEEeCCCCcEEEEEEecCCCCCce--e-EEEEeCCEEEEEE-----cCCCeEEEEeCCccceeeeEeCCc
Q psy16020         80 K-NKIHVVDPKSLVVLKSFDAHPRRESQV--R-QMTWAGDGVWVSI-----RLDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        80 ~-n~I~vid~~t~~i~~~~~~h~~~~~~I--~-~m~~~~~~vwis~-----~~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      . ++++.+|++|++.+-+..........+  + .-.+.++.|.+-.     ..++.|+.+|++|++.+-+++..+
T Consensus       136 ~~g~l~alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~  210 (573)
T d1kb0a2         136 WDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP  210 (573)
T ss_dssp             TTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred             cccceeeeccccccceecccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeecc
Confidence            4 699999999999886665432111111  1 1112244443321     125689999999999999998765

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.78  E-value=0.0053  Score=49.93  Aligned_cols=141  Identities=13%  Similarity=0.089  Sum_probs=86.4

Q ss_pred             CCceeeeeeCCCc--e-eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceE-EE--eCCCCCceEEEeeeCCEEEE
Q psy16020          5 HPTPYPLNKILDT--A-LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHT-VT--LGLPHHSVRSLAAVYNKVWC   77 (151)
Q Consensus         5 ~~~~l~~i~l~~~--V-~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~-i~--l~~~~~pV~~m~~v~~~Lw~   77 (151)
                      .-+..|+.++++.  + ..=...++.||++..+|.|..++...+. .|.++.... ..  .......-+..+.-++++++
T Consensus        43 ~L~~aW~~~~~~~~~~~stPiv~~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  122 (560)
T d1kv9a2          43 SLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYV  122 (560)
T ss_dssp             GEEEEEEEECSCCSCCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEE
T ss_pred             cceEEEEEECCCCCCcEeCCEEECCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcceeCCeEEE
Confidence            3356788888752  2 2224578899999999999999876432 364321100 00  00001222345556789999


Q ss_pred             EeC-CeEEEEeCCCCcEEEEEEecCCCCC-cee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeEeCCc
Q psy16020         78 GYK-NKIHVVDPKSLVVLKSFDAHPRRES-QVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDVDIEP  145 (151)
Q Consensus        78 g~~-n~I~vid~~t~~i~~~~~~h~~~~~-~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~idi~~  145 (151)
                      +.. +.++.+|++|++..-++..+..... .++ .-...++.|.+-..     -++.|+-+|++|++.+-+++.-+
T Consensus       123 ~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~  198 (560)
T d1kv9a2         123 GTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVP  198 (560)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred             EeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeecc
Confidence            985 6899999999999888875421111 111 11112333333211     13689999999999999998754

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.29  E-value=0.041  Score=44.59  Aligned_cols=138  Identities=12%  Similarity=0.028  Sum_probs=81.7

Q ss_pred             CceeeeeeCCCce-----eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCcceEEEeCCCCCce-EEEeeeCCEEEEE
Q psy16020          6 PTPYPLNKILDTA-----LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCG   78 (151)
Q Consensus         6 ~~~l~~i~l~~~V-----~~i~~~~~~v~vgl~nG~l~v~~~~~~~-~wd~~~~~~i~l~~~~~pV-~~m~~v~~~Lw~g   78 (151)
                      =+..|+.+.++..     ..-...++.||++..+|.|..++...+. .|.++.............+ |.+++.+++++.+
T Consensus        44 L~~aW~~~~g~~~~~~~~stPiv~~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~  123 (582)
T d1flga_          44 LTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFG  123 (582)
T ss_dssp             CEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEE
T ss_pred             ceEEEEEeCCCCCCCCcccCCEEECCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEeCCceEEe
Confidence            3456777776422     1235578899999999999999876433 3643211000000000111 4566778999999


Q ss_pred             eC-CeEEEEeCCCCcEEEEEEe--cCC----CCCceeEEEEe---CCEEEEEE------cCCCeEEEEeCCccceeeeEe
Q psy16020         79 YK-NKIHVVDPKSLVVLKSFDA--HPR----RESQVRQMTWA---GDGVWVSI------RLDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        79 ~~-n~I~vid~~t~~i~~~~~~--h~~----~~~~I~~m~~~---~~~vwis~------~~d~~l~lwd~~t~~~l~~id  142 (151)
                      +. ++++.+|++|++..=+...  +..    ...++.  ...   +..+.+..      ...+.|.-+|++|++.+-.++
T Consensus       124 t~~~~l~alda~tG~~~W~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~  201 (582)
T d1flga_         124 TLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTI--VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP  201 (582)
T ss_dssp             ETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEE--EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred             cCCCeEEEecccccceeeeecccCCCccceeecCceE--ecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEe
Confidence            85 6899999999997644432  110    011111  111   11222222      235689999999999999887


Q ss_pred             CCc
Q psy16020        143 IEP  145 (151)
Q Consensus       143 i~~  145 (151)
                      ..|
T Consensus       202 ~~~  204 (582)
T d1flga_         202 FVE  204 (582)
T ss_dssp             SST
T ss_pred             ccC
Confidence            654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.19  E-value=0.36  Score=35.13  Aligned_cols=95  Identities=6%  Similarity=-0.004  Sum_probs=61.5

Q ss_pred             CCeEEEEe-cCCcEEEEEcCCCCCCCCCcceE-EEeCCCCCceEEEee-eCCEEEEEe--CCeEEEEeCCCCcEEEEEEe
Q psy16020         25 QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAA-VYNKVWCGY--KNKIHVVDPKSLVVLKSFDA   99 (151)
Q Consensus        25 ~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~-i~l~~~~~pV~~m~~-v~~~Lw~g~--~n~I~vid~~t~~i~~~~~~   99 (151)
                      ++.+|++- ..+.|..|+.+.++......... +.......-...|.+ .++.||++.  +++|..||+ +++....+..
T Consensus       159 ~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~l  237 (295)
T d2ghsa1         159 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV  237 (295)
T ss_dssp             SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred             CceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecC
Confidence            34566554 46789999886544322223322 333332234567776 357899997  568999997 5788888875


Q ss_pred             cCCCCCceeEEEEeC---CEEEEEEcC
Q psy16020        100 HPRRESQVRQMTWAG---DGVWVSIRL  123 (151)
Q Consensus       100 h~~~~~~I~~m~~~~---~~vwis~~~  123 (151)
                      -.   ..++++++.|   +.++++..+
T Consensus       238 P~---~~~T~~~FGG~d~~~LyvTta~  261 (295)
T d2ghsa1         238 PG---KQTTCPAFIGPDASRLLVTSAR  261 (295)
T ss_dssp             SC---SBEEEEEEESTTSCEEEEEEBC
T ss_pred             CC---CceEEEEEeCCCCCEEEEEECC
Confidence            33   3799999975   357887665

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.19  E-value=0.0094  Score=46.03  Aligned_cols=101  Identities=10%  Similarity=0.128  Sum_probs=69.3

Q ss_pred             EecCCcEEEEEcCCCCCCCCCcceEE---EeCCCCCceEEEeeeC--CEEEEEeC----------CeEEEEeCCCCcEEE
Q psy16020         31 ALADGSVAIFRRGPDGQWDLSKYHTV---TLGLPHHSVRSLAAVY--NKVWCGYK----------NKIHVVDPKSLVVLK   95 (151)
Q Consensus        31 gl~nG~l~v~~~~~~~~wd~~~~~~i---~l~~~~~pV~~m~~v~--~~Lw~g~~----------n~I~vid~~t~~i~~   95 (151)
                      --.+|.+.+|+...+.     ....+   .+.....+|.+..+..  ..|..+++          +.++++|.+++++. 
T Consensus        32 ~~~~~~~~~~~~~t~~-----~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~-  105 (470)
T d2bgra1          32 YKQENNILVFNAEYGN-----SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-  105 (470)
T ss_dssp             EESSSCEEEEETTTCC-----EEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-
T ss_pred             EEcCCcEEEEECCCCC-----EEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccc-
Confidence            3457888888765321     11111   1112236788877763  44555542          46899999999864 


Q ss_pred             EEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeee
Q psy16020         96 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQD  140 (151)
Q Consensus        96 ~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~  140 (151)
                      ++..|++   .+....++++|-+++...+..+++|+..+++..+.
T Consensus       106 ~l~~~~~---~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~  147 (470)
T d2bgra1         106 TEERIPN---NTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRI  147 (470)
T ss_dssp             CSSCCCT---TEEEEEECSSTTCEEEEETTEEEEESSTTSCCEEC
T ss_pred             ccccCCc---cccccccccCcceeeEeecccceEEECCCCceeee
Confidence            4666654   78899999999988999999999999998876654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=95.13  E-value=0.36  Score=34.83  Aligned_cols=119  Identities=13%  Similarity=0.056  Sum_probs=71.4

Q ss_pred             ceeeeeeCCCceeeeEEeC-CeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CC
Q psy16020          7 TPYPLNKILDTALPPVHVQ-GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KN   81 (151)
Q Consensus         7 ~~l~~i~l~~~V~~i~~~~-~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n   81 (151)
                      +.+..+.-+.-+..|...+ ++||++.. +|+|..++  .+|..    .....+.   ..+.++++- +++||++.  ++
T Consensus        19 ~v~~~~p~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~--p~g~~----~~~~~~~---~~~~gla~~~dG~l~v~~~~~~   89 (302)
T d2p4oa1          19 KIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSIT--PDGNQ----QIHATVE---GKVSGLAFTSNGDLVATGWNAD   89 (302)
T ss_dssp             EEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEEC--TTCCE----EEEEECS---SEEEEEEECTTSCEEEEEECTT
T ss_pred             cEEEECCCCCCcCCEEECCCCCEEEEeCCCCEEEEEe--CCCCE----EEEEcCC---CCcceEEEcCCCCeEEEecCCc
Confidence            4444454444455665543 47776654 66665554  44531    1122222   566788876 46788875  46


Q ss_pred             eEEEEeCCCC--cEEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCccc
Q psy16020         82 KIHVVDPKSL--VVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQ  136 (151)
Q Consensus        82 ~I~vid~~t~--~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~~  136 (151)
                      +++.++..+.  ....-.. .. .....+.+....+ .+|++.+..+.+..+|..+..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~  145 (302)
T d2p4oa1          90 SIPVVSLVKSDGTVETLLT-LP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS  145 (302)
T ss_dssp             SCEEEEEECTTSCEEEEEE-CT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred             eEEEEEecccccceeeccc-cC-CccccceeEEccCCCEEeeccccccceeeeccCCc
Confidence            7888776543  3332222 22 3456888888755 459999999999999888654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.13  E-value=0.37  Score=35.02  Aligned_cols=103  Identities=10%  Similarity=0.101  Sum_probs=65.8

Q ss_pred             CCe-EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeCCeEEEEeCCCCcEEEEEEecC-
Q psy16020         25 QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLVVLKSFDAHP-  101 (151)
Q Consensus        25 ~~~-v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~-  101 (151)
                      ++. .|+-..+|.|..|+...      .....+.+.   .++.+++.- ++.||+|+++.|+.+|+++++.+.-..... 
T Consensus        29 ~~~l~wvDi~~~~I~r~d~~~------g~~~~~~~~---~~~~~i~~~~dg~l~va~~~gl~~~d~~tg~~~~l~~~~~~   99 (295)
T d2ghsa1          29 SGTAWWFNILERELHELHLAS------GRKTVHALP---FMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESD   99 (295)
T ss_dssp             TTEEEEEEGGGTEEEEEETTT------TEEEEEECS---SCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTT
T ss_pred             CCEEEEEECCCCEEEEEECCC------CeEEEEECC---CCcEEEEEecCCCEEEEEeCccEEeecccceeeEEeeeecC
Confidence            344 45666788888877532      122334443   567788875 689999999999999999999865443221 


Q ss_pred             CCCCceeEEEEeCCE-EEEEEcC----CCeEEEEeCCccc
Q psy16020        102 RRESQVRQMTWAGDG-VWVSIRL----DSTLRMYNAHTYQ  136 (151)
Q Consensus       102 ~~~~~I~~m~~~~~~-vwis~~~----d~~l~lwd~~t~~  136 (151)
                      .....++.+..+++| +|++...    .+.-.+|+....+
T Consensus       100 ~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~  139 (295)
T d2ghsa1         100 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK  139 (295)
T ss_dssp             CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE
T ss_pred             CCcccceeeEECCCCCEEEEeccccccccceeEeeecCCc
Confidence            223468888888665 5887543    2334455544443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=95.13  E-value=0.28  Score=38.64  Aligned_cols=71  Identities=8%  Similarity=0.019  Sum_probs=50.6

Q ss_pred             CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCE--EEEEEcCCCeE------------------EE
Q psy16020         72 YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTL------------------RM  129 (151)
Q Consensus        72 ~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~--vwis~~~d~~l------------------~l  129 (151)
                      +..||++..  ++|-+||++|+++.+.++.-.  ...++.+.+++++  .|++...+..+                  ..
T Consensus        83 Gr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~--g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~  160 (441)
T d1qnia2          83 GKYLFINDKANTRVARIRLDIMKTDKITHIPN--VQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTA  160 (441)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEEECTT--CCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEE
T ss_pred             CCEEEEEcCCCCEEEEEECCCCcEeeEEecCC--CCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEe
Confidence            456999873  699999999999999887532  2478888887443  36665544433                  55


Q ss_pred             EeCCccceeeeEeCC
Q psy16020        130 YNAHTYQHLQDVDIE  144 (151)
Q Consensus       130 wd~~t~~~l~~idi~  144 (151)
                      +|+.|.+....|.+.
T Consensus       161 iD~~t~~v~~qI~v~  175 (441)
T d1qnia2         161 IDAETMDVAWQVIVD  175 (441)
T ss_dssp             EETTTCSEEEEEEES
T ss_pred             ecCccceeeEEEecC
Confidence            888888877766543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.00  E-value=0.26  Score=39.90  Aligned_cols=138  Identities=11%  Similarity=0.044  Sum_probs=81.1

Q ss_pred             ceeeeeeCCC----ceeeeEEeCCeEEEEec-CCcEEEEEcCCCC--CCCCCcceEEE---eCCCCCceEEEeeeC----
Q psy16020          7 TPYPLNKILD----TALPPVHVQGRVVCALA-DGSVAIFRRGPDG--QWDLSKYHTVT---LGLPHHSVRSLAAVY----   72 (151)
Q Consensus         7 ~~l~~i~l~~----~V~~i~~~~~~v~vgl~-nG~l~v~~~~~~~--~wd~~~~~~i~---l~~~~~pV~~m~~v~----   72 (151)
                      +..|+.++++    ...=| ..++.||++.+ +|.+...+....|  .|.++......   ...+...-|.+++.+    
T Consensus        41 ~~aW~~~~~~~~~~~~tPi-v~~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~  119 (596)
T d1w6sa_          41 RPAWTFSTGLLNGHEGAPL-VVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGK  119 (596)
T ss_dssp             EEEEEEECSCCSCCCSCCE-EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSS
T ss_pred             eEEEEEECCCCCCceeCCE-EECCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCC
Confidence            4567777653    22223 46789999876 5888888753323  46443211000   000001124455543    


Q ss_pred             --CEEEEEe-CCeEEEEeCCCCcEEEEEEecC-CCCCcee-EEEEeCCEEEEEEc-----CCCeEEEEeCCccceeeeEe
Q psy16020         73 --NKVWCGY-KNKIHVVDPKSLVVLKSFDAHP-RRESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHLQDVD  142 (151)
Q Consensus        73 --~~Lw~g~-~n~I~vid~~t~~i~~~~~~h~-~~~~~I~-~m~~~~~~vwis~~-----~d~~l~lwd~~t~~~l~~id  142 (151)
                        .+++.+. +++++.+|++|++..-.+.... .....++ .-.+.++.|.+-.+     -++.|+-||++|++++-..+
T Consensus       120 ~~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~  199 (596)
T d1w6sa_         120 TPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY  199 (596)
T ss_dssp             SCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             CceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEee
Confidence              2588888 5699999999999998886321 0001111 11233566554433     25899999999999999887


Q ss_pred             CCc
Q psy16020        143 IEP  145 (151)
Q Consensus       143 i~~  145 (151)
                      .-+
T Consensus       200 t~~  202 (596)
T d1w6sa_         200 ATG  202 (596)
T ss_dssp             SSS
T ss_pred             ccC
Confidence            654

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.22  E-value=0.072  Score=43.08  Aligned_cols=63  Identities=14%  Similarity=0.139  Sum_probs=48.0

Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +.|+.||+.|++++=++..+....+.+  ++ ...++..++..|+.++.||++|+|.|-++++...
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~--ls-tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~  528 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGV--LA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG  528 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCC--EE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccce--eE-EcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCC
Confidence            479999999999988887654322222  23 3455655789999999999999999999987554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=93.83  E-value=0.12  Score=40.94  Aligned_cols=102  Identities=8%  Similarity=-0.095  Sum_probs=66.0

Q ss_pred             EEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee--CCEEEEEe--CCeE-------------
Q psy16020         22 VHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKI-------------   83 (151)
Q Consensus        22 ~~~~~~v~vgl-~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~--~n~I-------------   83 (151)
                      .+.++++||+- +|+.|++++..     +.+..+.+++.. ....+.+.+.  ++++|+.+  .+.+             
T Consensus        80 tpDGr~lfV~d~~~~rVavIDl~-----t~k~~~ii~iP~-g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~  153 (441)
T d1qnia2          80 RYDGKYLFINDKANTRVARIRLD-----IMKTDKITHIPN-VQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDN  153 (441)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETT-----TTEEEEEEECTT-CCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGG
T ss_pred             cCCCCEEEEEcCCCCEEEEEECC-----CCcEeeEEecCC-CCCccceEEeccCCEEEEEeccCCcccccCccccccccc
Confidence            45567899885 78899999875     334445666653 2566777776  45566655  3444             


Q ss_pred             -----EEEeCCCCcEEEEEEecCCCCCceeEEEEeCC--EEEEEEcCCCeEEEEeCC
Q psy16020         84 -----HVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        84 -----~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~--~vwis~~~d~~l~lwd~~  133 (151)
                           .++|++|+++..++.+..    ....+..+++  .+|++..++..+..+|..
T Consensus       154 ~~~~~~~iD~~t~~v~~qI~v~~----~p~~v~~spdGk~a~vt~~nse~~~~id~~  206 (441)
T d1qnia2         154 SYTMFTAIDAETMDVAWQVIVDG----NLDNTDADYTGKYATSTCYNSERAVDLAGT  206 (441)
T ss_dssp             EEEEEEEEETTTCSEEEEEEESS----CCCCEEECSSSSEEEEEESCTTCCSSHHHH
T ss_pred             ccceEEeecCccceeeEEEecCC----CccceEECCCCCEEEEEecCCCceEEEecc
Confidence                 569999999999998774    3556666644  446666554433333333

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.78  E-value=0.13  Score=41.39  Aligned_cols=63  Identities=17%  Similarity=0.105  Sum_probs=47.2

Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      ++|..||+.|++++=+.+.......  -.|+. ..++...+..|+.++.||++|+|.|-++++...
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~g--g~lst-agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~  519 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNG--GTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG  519 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCC--CEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCC--ceEEE-cCCEEEEECCCCeEEEEECCCCcEeEEEECCCC
Confidence            4799999999998877775432112  23444 445555789999999999999999999987543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.68  E-value=0.19  Score=40.48  Aligned_cols=63  Identities=11%  Similarity=-0.002  Sum_probs=45.2

Q ss_pred             CeEEEEeCCCCcEEEEEEe-cCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCccc
Q psy16020         81 NKIHVVDPKSLVVLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV  147 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~-h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~v  147 (151)
                      +.|..||++|++++=++.- .......   |.. ..++.+.++.|+.++.+|++|+|.+-++++...+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~g~---l~T-agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~  507 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWGGT---LYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG  507 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBC---EEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCcce---eEe-cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCc
Confidence            4799999999998766552 2211122   223 4555446899999999999999999999876543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=92.24  E-value=0.3  Score=39.06  Aligned_cols=63  Identities=8%  Similarity=0.033  Sum_probs=46.2

Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +.|..||+.|++++=++..-......  .|+. ..++...+..|+.++.||++|+|.|-++++-..
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg--~l~T-agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~  500 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGG--TLST-AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSG  500 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCC--EEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCc--eeEE-CCCEEEEECCCCcEEEEECCCCcEeEEEECCCC
Confidence            47999999999988776643221121  2333 455555789999999999999999999987543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.79  E-value=1  Score=31.49  Aligned_cols=106  Identities=11%  Similarity=0.031  Sum_probs=62.5

Q ss_pred             eeeeEEe-CCeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEeC--CeEEEEeCCCCc
Q psy16020         18 ALPPVHV-QGRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLV   92 (151)
Q Consensus        18 V~~i~~~-~~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~   92 (151)
                      ...|... ++++|++ ..++.|..|+......      ..+.......| ..|++- ++.||+++.  ++|+.+++.+..
T Consensus       142 p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~------~~~~~~~~~~p-~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~  214 (260)
T d1rwia_         142 PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ------VVLPFTDITAP-WGIAVDEAGTVYVTEHNTNQVVKLLAGSTT  214 (260)
T ss_dssp             CCEEEECTTCCEEEEEGGGTEEEEECTTTCCE------EECCCSSCCSE-EEEEECTTCCEEEEETTTTEEEEECTTCSC
T ss_pred             cceeeecCCCCEeeecccccccccccccccee------eeeeccccCCC-ccceeeeeeeeeeeecCCCEEEEEeCCCCe
Confidence            3445442 4467776 4455677776542211      11111222245 556663 468999884  589999876543


Q ss_pred             EEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCC
Q psy16020         93 VLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAH  133 (151)
Q Consensus        93 i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~  133 (151)
                      . ..+..  ........|+.+++ .+|++-..+..|+.+++.
T Consensus       215 ~-~~~~~--~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         215 S-TVLPF--TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             C-EECCC--CSCCCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             E-EEEcc--CCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCC
Confidence            2 22211  12246788998865 579998888888877766

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=91.69  E-value=1.7  Score=31.51  Aligned_cols=77  Identities=12%  Similarity=0.132  Sum_probs=51.6

Q ss_pred             EEEeee--CCEEEEEe--CCeEEEEeCCC-Cc---EEEEEEecC-CCCCceeEEEEeCCE-EEEEEcCCCeEEEEeCCcc
Q psy16020         66 RSLAAV--YNKVWCGY--KNKIHVVDPKS-LV---VLKSFDAHP-RRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        66 ~~m~~v--~~~Lw~g~--~n~I~vid~~t-~~---i~~~~~~h~-~~~~~I~~m~~~~~~-vwis~~~d~~l~lwd~~t~  135 (151)
                      +.|++.  ++.||++.  .++|+.+|.+. +.   .......+. .......-|+++.+| +|++....+.|..||. ++
T Consensus       180 nGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G  258 (319)
T d2dg1a1         180 NGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RG  258 (319)
T ss_dssp             EEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TS
T ss_pred             eeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CC
Confidence            456664  46799987  47999998642 22   221111111 112245678888554 7999999999999997 59


Q ss_pred             ceeeeEeC
Q psy16020        136 QHLQDVDI  143 (151)
Q Consensus       136 ~~l~~idi  143 (151)
                      +.+.+|.+
T Consensus       259 ~~l~~i~~  266 (319)
T d2dg1a1         259 YPIGQILI  266 (319)
T ss_dssp             CEEEEEEC
T ss_pred             cEEEEEeC
Confidence            99999975

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.99  E-value=1.8  Score=30.51  Aligned_cols=77  Identities=5%  Similarity=0.054  Sum_probs=52.6

Q ss_pred             CceEEEeee-CCEEEEEeC--CeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCC-EEEEEEcC-CCeEEEEeCCccce
Q psy16020         63 HSVRSLAAV-YNKVWCGYK--NKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGD-GVWVSIRL-DSTLRMYNAHTYQH  137 (151)
Q Consensus        63 ~pV~~m~~v-~~~Lw~g~~--n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~-d~~l~lwd~~t~~~  137 (151)
                      .....+++- ++.+|++..  ++|+++|. +++...+|. ..........|+++++ .+|++-.. ...|.+|+.. ++.
T Consensus       157 ~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g-~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G~~  233 (279)
T d1q7fa_         157 EFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIG-GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQL  233 (279)
T ss_dssp             SSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEES-CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCE
T ss_pred             cccceeeeccceeEEeeeccccceeeeec-CCceeeeec-ccccccCCcccccccCCeEEEEECCCCcEEEEECCC-CCE
Confidence            334455553 478998874  68999987 467777774 3323446788888755 47888654 4579999854 888


Q ss_pred             eeeEe
Q psy16020        138 LQDVD  142 (151)
Q Consensus       138 l~~id  142 (151)
                      +..|.
T Consensus       234 ~~~~~  238 (279)
T d1q7fa_         234 ISALE  238 (279)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            87774

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=90.84  E-value=0.4  Score=38.78  Aligned_cols=62  Identities=13%  Similarity=-0.030  Sum_probs=43.7

Q ss_pred             CeEEEEeCCCCcEEEEEEec-CCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCccceeeeEeCCcc
Q psy16020         81 NKIHVVDPKSLVVLKSFDAH-PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY  146 (151)
Q Consensus        81 n~I~vid~~t~~i~~~~~~h-~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l~~idi~~~  146 (151)
                      +.|..||+.|+++.=+.... ......   |.. ..++...+..|+.++.||++|+|.|-++++...
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~---lsT-agglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~  515 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGT---MAT-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG  515 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBC---EEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred             ceEEEEeCCCCceecccCCCCCCccce---eEe-cCCEEEEECCCCeEEEEECCCCcEeeEEECCCC
Confidence            47999999999986554422 111112   223 344544689999999999999999999987543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.70  E-value=1.9  Score=30.35  Aligned_cols=111  Identities=13%  Similarity=0.131  Sum_probs=70.4

Q ss_pred             ceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCC---CCceEEEeee-CCEEEEEe-C-C-eEEEEe
Q psy16020         17 TALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLP---HHSVRSLAAV-YNKVWCGY-K-N-KIHVVD   87 (151)
Q Consensus        17 ~V~~i~~~-~~~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~---~~pV~~m~~v-~~~Lw~g~-~-n-~I~vid   87 (151)
                      ....|... ++.+|++.. ++.|.+|+.+  |.      ...+++.+   ..| +.|++- ++.||++- . + +|.++|
T Consensus       158 ~~~~i~~d~~g~i~v~d~~~~~V~~~d~~--G~------~~~~~g~~g~~~~P-~giavD~~G~i~Vad~~~~~~v~~f~  228 (279)
T d1q7fa_         158 FPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQ------YLRQIGGEGITNYP-IGVGINSNGEILIADNHNNFNLTIFT  228 (279)
T ss_dssp             SEEEEEECSSSEEEEEEGGGTEEEEEETT--CC------EEEEESCTTTSCSE-EEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred             ccceeeeccceeEEeeeccccceeeeecC--Cc------eeeeecccccccCC-cccccccCCeEEEEECCCCcEEEEEC
Confidence            34444443 456777654 4678888743  42      23344431   133 456653 46799885 2 3 699997


Q ss_pred             CCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEcCCCeEEEEeCCcccee
Q psy16020         88 PKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL  138 (151)
Q Consensus        88 ~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~~d~~l~lwd~~t~~~l  138 (151)
                      + +++..+++....+ ......+++.++|-++..+.+..|++|.-.++.+.
T Consensus       229 ~-~G~~~~~~~~~~~-~~~p~~vav~~dG~l~V~~~n~~v~~fr~~~~~~~  277 (279)
T d1q7fa_         229 Q-DGQLISALESKVK-HAQCFDVALMDDGSVVLASKDYRLYIYRYVQLAPV  277 (279)
T ss_dssp             T-TSCEEEEEEESSC-CSCEEEEEEETTTEEEEEETTTEEEEEECSCCCCT
T ss_pred             C-CCCEEEEEeCCCC-CCCEeEEEEeCCCcEEEEeCCCeEEEEEeeeecCC
Confidence            5 6898899886543 34578888887766445567889999998877653

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.50  E-value=0.92  Score=34.17  Aligned_cols=115  Identities=9%  Similarity=0.058  Sum_probs=69.6

Q ss_pred             EEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe-C--C-----eEEEEeCCCCcEEEEEE
Q psy16020         28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY-K--N-----KIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        28 v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~-~--n-----~I~vid~~t~~i~~~~~   98 (151)
                      ++++..+|.--+|....+|    ..+..+.-|.  ..|..+... ++.+|... +  .     .||.++...+.-.+.+.
T Consensus       335 ~~~s~~dg~~~ly~~~~~g----~~~~~lt~g~--~~v~~~~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt  408 (470)
T d2bgra1         335 KIISNEEGYRHICYFQIDK----KDCTFITKGT--WEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLS  408 (470)
T ss_dssp             EEEECTTSCEEEEEEETTC----SCCEESCCSS--SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESS
T ss_pred             EEEeccCcCceeEEEeccC----CceeeeccCC--eeEEEEEEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEec
Confidence            6677778776666554333    2223333343  667666544 46776543 2  1     38888887655444443


Q ss_pred             ecC-CCCCceeEEEEeCCEEEE----EEcCCCeEEEEeCCccceeeeEeCCcccc
Q psy16020         99 AHP-RRESQVRQMTWAGDGVWV----SIRLDSTLRMYNAHTYQHLQDVDIEPYVS  148 (151)
Q Consensus        99 ~h~-~~~~~I~~m~~~~~~vwi----s~~~d~~l~lwd~~t~~~l~~idi~~~v~  148 (151)
                      ..- .....++...++++|-++    |+.+.+.++||+..+++.+..+.--..+.
T Consensus       409 ~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le~n~~l~  463 (470)
T d2bgra1         409 CELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALD  463 (470)
T ss_dssp             TTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEECCHHHH
T ss_pred             ccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEEeccHHHH
Confidence            111 112468899999887642    34456779999999999999885333333

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=89.25  E-value=3.1  Score=30.61  Aligned_cols=130  Identities=10%  Similarity=0.065  Sum_probs=73.4

Q ss_pred             CceeeeEEeCC--eEEEEec-CCcEEEEEcCCCCCCCCCcceEEEeCCCC----------C--ceEEEeee--CCEEEEE
Q psy16020         16 DTALPPVHVQG--RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPH----------H--SVRSLAAV--YNKVWCG   78 (151)
Q Consensus        16 ~~V~~i~~~~~--~v~vgl~-nG~l~v~~~~~~~~wd~~~~~~i~l~~~~----------~--pV~~m~~v--~~~Lw~g   78 (151)
                      +.+.-+.++++  ++|+... +++|.+|+++....-.......+++-.+.          .  ....+.+.  ++.||++
T Consensus       193 ~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvs  272 (365)
T d1jofa_         193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS  272 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEE
Confidence            35556667654  6877774 57899999864321111122223321110          1  12233443  4679998


Q ss_pred             eC--C-----eEEEEeCC-CCcEEEEEEec--CCCCCceeEEEEe---CCEEEEEEcCCCeEEEEe--CCccceeeeEeC
Q psy16020         79 YK--N-----KIHVVDPK-SLVVLKSFDAH--PRRESQVRQMTWA---GDGVWVSIRLDSTLRMYN--AHTYQHLQDVDI  143 (151)
Q Consensus        79 ~~--n-----~I~vid~~-t~~i~~~~~~h--~~~~~~I~~m~~~---~~~vwis~~~d~~l~lwd--~~t~~~l~~idi  143 (151)
                      ..  +     .|..++.. ++.+.+....+  .........|.++   |..++++...++.|.+|+  .++.+.+.++++
T Consensus       273 nr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~v  352 (365)
T d1jofa_         273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVRI  352 (365)
T ss_dssp             EEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEEEEEC
T ss_pred             cccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCcCcEEEEEEC
Confidence            63  2     27666654 34444433321  1123456677776   445778888999999995  556777888877


Q ss_pred             Cc
Q psy16020        144 EP  145 (151)
Q Consensus       144 ~~  145 (151)
                      ..
T Consensus       353 p~  354 (365)
T d1jofa_         353 PE  354 (365)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>d1shyb1 b.69.12.1 (B:40-515) Hepatocyte growth factor receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Sema domain
family: Sema domain
domain: Hepatocyte growth factor receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.89  E-value=0.65  Score=36.54  Aligned_cols=37  Identities=14%  Similarity=0.296  Sum_probs=33.2

Q ss_pred             CCceEEEeeeCCEEEEEeCCeEEEEeCCCCcEEEEEE
Q psy16020         62 HHSVRSLAAVYNKVWCGYKNKIHVVDPKSLVVLKSFD   98 (151)
Q Consensus        62 ~~pV~~m~~v~~~Lw~g~~n~I~vid~~t~~i~~~~~   98 (151)
                      ..||..|+..+++||+|..|.||.+|..+++.+....
T Consensus        10 ~~~iq~i~~~~~~vyVGArn~iy~L~~~dL~~~~~~~   46 (476)
T d1shyb1          10 ETPIQNVILHEHHIFLGATNYIYVLNEEDLQKVAEYK   46 (476)
T ss_dssp             SSCEEEEEEETTEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred             CCCceEEEEECCEEEEEeeeeEEEeccccCcceeEEE
Confidence            3899999999999999999999999998888877754

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.65  E-value=1.5  Score=29.79  Aligned_cols=64  Identities=16%  Similarity=0.124  Sum_probs=45.1

Q ss_pred             CCEEEEEeCCeEEEEeCCCCcEEEEEEecCCCCCceeEEEEeCCEEEEEEc---CC----CeEEEEeCCccceee
Q psy16020         72 YNKVWCGYKNKIHVVDPKSLVVLKSFDAHPRRESQVRQMTWAGDGVWVSIR---LD----STLRMYNAHTYQHLQ  139 (151)
Q Consensus        72 ~~~Lw~g~~n~I~vid~~t~~i~~~~~~h~~~~~~I~~m~~~~~~vwis~~---~d----~~l~lwd~~t~~~l~  139 (151)
                      +++|...+++.|+++|+.+++.. ++..+.   ..+....++++|-++++.   .+    +.|.++++.+.+..+
T Consensus        12 G~~v~f~~~~dl~~~d~~~g~~~-~Lt~~~---~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2          12 GDRIIFVCCDDLWEHDLKSGSTR-KIVSNL---GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             TTEEEEEETTEEEEEETTTCCEE-EEECSS---SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCcEEEEECCCCCEE-EEecCC---CcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            77877777889999999999874 455443   367888899777655542   22    248888888766544

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=87.02  E-value=4.3  Score=29.73  Aligned_cols=74  Identities=16%  Similarity=0.065  Sum_probs=45.2

Q ss_pred             ceeeeEEe--CCeEEEE-ecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeeeC--CEEEEEeC--CeEEEEeCC
Q psy16020         17 TALPPVHV--QGRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPK   89 (151)
Q Consensus        17 ~V~~i~~~--~~~v~vg-l~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v~--~~Lw~g~~--n~I~vid~~   89 (151)
                      -+.++.+.  ++++|++ ++...|.+|+....|.  +.....+....+..--|.+.+..  ..+|+.+.  ++|.+||.+
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~--~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~  223 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGE--VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC--EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc--eeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence            35667665  3468877 4455799998765442  11222233322223457788864  57999984  789999877


Q ss_pred             CCc
Q psy16020         90 SLV   92 (151)
Q Consensus        90 t~~   92 (151)
                      +.+
T Consensus       224 ~~~  226 (365)
T d1jofa_         224 PAT  226 (365)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            654

>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Sema domain
family: Sema domain
domain: Semaphorin 3a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.56  E-value=2.2  Score=33.49  Aligned_cols=61  Identities=10%  Similarity=0.150  Sum_probs=39.1

Q ss_pred             eEEEEecCCcEEEEEcCCCCCCCC-C--cceEEEeCCCCCceEEEeee--CCEEEEEeCCeEEEEe
Q psy16020         27 RVVCALADGSVAIFRRGPDGQWDL-S--KYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVD   87 (151)
Q Consensus        27 ~v~vgl~nG~l~v~~~~~~~~wd~-~--~~~~i~l~~~~~pV~~m~~v--~~~Lw~g~~n~I~vid   87 (151)
                      -+|+|+.+|.|.-.-....+.+.. +  ....+++....+||+.|.+.  ++.||++++.+|.=+-
T Consensus       423 V~flGT~~G~l~Kv~~~~~~~~~~~~~~~iee~~~~~~~~pI~~l~l~~~~~~Lyv~t~~~V~~vp  488 (495)
T d1q47a_         423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLP  488 (495)
T ss_dssp             EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEEE
T ss_pred             EEEEEcCCCEEEEEEEcCCCCccccceeEEEEEeecCCCCceEEEEEeCCCCEEEEEeCCeEEEEE
Confidence            499999999988654433232211 1  22345555556899999995  4789999998876553

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.28  E-value=6.4  Score=27.05  Aligned_cols=109  Identities=12%  Similarity=0.071  Sum_probs=65.2

Q ss_pred             ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCcceEEEeCCCCCceEEEeee-CCEEEEEe--CCeEEEEeCCCCc
Q psy16020         17 TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLV   92 (151)
Q Consensus        17 ~V~~i~~~-~~~v~vgl~nG~l~v~~~~~~~~wd~~~~~~i~l~~~~~pV~~m~~v-~~~Lw~g~--~n~I~vid~~t~~   92 (151)
                      .+..|... ++++|++-..+.+..+.....+.      .......- .-.+.|++- ++.+|+.-  .++++.++..+..
T Consensus        58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~------~~~~~~~~-~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~  130 (260)
T d1rwia_          58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ------TVLPFDGL-NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT  130 (260)
T ss_dssp             SCCCEEECTTCCEEEEETTTEEEEECTTCSCC------EECCCCSC-CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSS
T ss_pred             CceEEEEcCCCCEEEeeeeeceeeeeeeccce------eeeeeeee-eecccccccccceeEeeccccccccccccccce
Confidence            34455553 45788888777665554332221      22222221 334677774 46788876  3689999877644


Q ss_pred             EEEEEEecCCCCCceeEEEEeCC-EEEEEEcCCCeEEEEeCCcc
Q psy16020         93 VLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTY  135 (151)
Q Consensus        93 i~~~~~~h~~~~~~I~~m~~~~~-~vwis~~~d~~l~lwd~~t~  135 (151)
                      . ..+...  .......++..++ .+|++......|..+|..+.
T Consensus       131 ~-~~~~~~--~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~  171 (260)
T d1rwia_         131 Q-TVLPFT--GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN  171 (260)
T ss_dssp             C-EECCCC--SCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred             e-eeeeec--ccCCcceeeecCCCCEeeeccccccccccccccc
Confidence            3 222211  1234567777644 56999999999999998753