Psyllid ID: psy16053
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| 328703604 | 864 | PREDICTED: adenylate cyclase type 3-like | 0.803 | 0.326 | 0.713 | 1e-125 | |
| 189237219 | 1063 | PREDICTED: similar to AGAP009315-PA [Tri | 0.814 | 0.269 | 0.706 | 1e-124 | |
| 270007506 | 1151 | hypothetical protein TcasGA2_TC014098 [T | 0.814 | 0.248 | 0.706 | 1e-124 | |
| 158288121 | 1157 | AGAP009315-PA [Anopheles gambiae str. PE | 0.809 | 0.245 | 0.711 | 1e-123 | |
| 170041696 | 440 | conserved hypothetical protein [Culex qu | 0.803 | 0.640 | 0.698 | 1e-122 | |
| 403183026 | 1198 | AAEL009344-PA [Aedes aegypti] | 0.792 | 0.232 | 0.708 | 1e-121 | |
| 242007870 | 1088 | adenylate cyclase type, putative [Pedicu | 0.780 | 0.251 | 0.717 | 1e-120 | |
| 157122956 | 554 | adenylate cyclase [Aedes aegypti] | 0.720 | 0.456 | 0.749 | 1e-118 | |
| 194877950 | 1167 | GG21341 [Drosophila erecta] gi|190657165 | 0.874 | 0.263 | 0.623 | 1e-113 | |
| 194760503 | 1177 | GF15486 [Drosophila ananassae] gi|190616 | 0.888 | 0.265 | 0.618 | 1e-113 |
| >gi|328703604|ref|XP_001947726.2| PREDICTED: adenylate cyclase type 3-like, partial [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/307 (71%), Positives = 255/307 (83%), Gaps = 25/307 (8%)
Query: 1 MEKASKVLFIWKKEVESQKETASDIRRRNEALVYNILPPHVASHFLGNRKRQHEELYSQS 60
M+K+S+VL++W+ EVE Q+E ASDIRRRNEALVYNILPPHVA HFLG+ KRQHEELYSQS
Sbjct: 561 MDKSSRVLYLWRTEVEEQRERASDIRRRNEALVYNILPPHVAKHFLGSYKRQHEELYSQS 620
Query: 61 YAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFKEWSRPIKSL 120
YAEVGVLFASMPNFS+FY E+ VN QGLECLRFLNEVISDFDALLE P++++
Sbjct: 621 YAEVGVLFASMPNFSDFYSEETVNNQGLECLRFLNEVISDFDALLEQPRYQD-------- 672
Query: 121 LELPKFKEVIKIKTIGSTYMAASGLDPNFVATIKPSDPIEVRWKHLDVLIEFAMEMKKAL 180
+IKIKTIGSTYMAASGL+P+ V +KP DPIEVRW HL +L++FA ++K+AL
Sbjct: 673 --------IIKIKTIGSTYMAASGLNPSRV--VKPEDPIEVRWAHLALLVDFAFDLKRAL 722
Query: 181 TGINEQSFNHFVLKMGVNHGPITAGVIGARKPHYDIWGNTVNVASRMESTGRAGFIQVTE 240
GINEQSFNHFVLKMG+NHGPITAGVIGARKPHYDIWGN+VNVASRMESTG+AG IQVTE
Sbjct: 723 QGINEQSFNHFVLKMGINHGPITAGVIGARKPHYDIWGNSVNVASRMESTGKAGCIQVTE 782
Query: 241 ETTHILQHFGYIFEQRGLVSVKGKGQLMTYYLLGKSTTGANYPSGLPPFENSVMEPLKEV 300
ET +ILQHFG+ FEQRGLV+VKGKGQLMTYYL+GK PS +PP +ME L EV
Sbjct: 783 ETCNILQHFGFKFEQRGLVAVKGKGQLMTYYLVGKGLQ----PSQVPP---PIMETLPEV 835
Query: 301 DEEKEEE 307
+EE ++
Sbjct: 836 EEEDTDD 842
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|189237219|ref|XP_001810222.1| PREDICTED: similar to AGAP009315-PA [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|270007506|gb|EFA03954.1| hypothetical protein TcasGA2_TC014098 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|158288121|ref|XP_001230685.2| AGAP009315-PA [Anopheles gambiae str. PEST] gi|157019231|gb|EAU77417.2| AGAP009315-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|170041696|ref|XP_001848590.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167865250|gb|EDS28633.1| conserved hypothetical protein [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|403183026|gb|EAT38797.2| AAEL009344-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|242007870|ref|XP_002424741.1| adenylate cyclase type, putative [Pediculus humanus corporis] gi|212508234|gb|EEB12003.1| adenylate cyclase type, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|157122956|ref|XP_001653783.1| adenylate cyclase [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|194877950|ref|XP_001973978.1| GG21341 [Drosophila erecta] gi|190657165|gb|EDV54378.1| GG21341 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|194760503|ref|XP_001962479.1| GF15486 [Drosophila ananassae] gi|190616176|gb|EDV31700.1| GF15486 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 351 | ||||||
| RGD|71009 | 1144 | Adcy3 "adenylate cyclase 3" [R | 0.760 | 0.233 | 0.562 | 1.7e-79 | |
| UNIPROTKB|G3V6I2 | 1144 | Adcy3 "Adenylate cyclase type | 0.760 | 0.233 | 0.562 | 1.7e-79 | |
| UNIPROTKB|J9P156 | 1145 | ADCY3 "Uncharacterized protein | 0.760 | 0.233 | 0.562 | 1.7e-79 | |
| MGI|MGI:99675 | 1145 | Adcy3 "adenylate cyclase 3" [M | 0.760 | 0.233 | 0.562 | 1.7e-79 | |
| UNIPROTKB|F1PNQ0 | 1151 | ADCY3 "Uncharacterized protein | 0.760 | 0.231 | 0.562 | 1.9e-79 | |
| UNIPROTKB|F1SDL2 | 1153 | ADCY3 "Uncharacterized protein | 0.760 | 0.231 | 0.562 | 2e-79 | |
| UNIPROTKB|F1MPC9 | 1151 | ADCY3 "Uncharacterized protein | 0.760 | 0.231 | 0.562 | 2.5e-79 | |
| UNIPROTKB|B3KT86 | 731 | ADCY3 "Adenylate cyclase type | 0.760 | 0.365 | 0.558 | 3.3e-79 | |
| UNIPROTKB|O60266 | 1144 | ADCY3 "Adenylate cyclase type | 0.760 | 0.233 | 0.558 | 6.3e-79 | |
| UNIPROTKB|F1NGF1 | 1133 | ADCY3 "Uncharacterized protein | 0.749 | 0.232 | 0.563 | 4.8e-77 |
| RGD|71009 Adcy3 "adenylate cyclase 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 801 (287.0 bits), Expect = 1.7e-79, P = 1.7e-79
Identities = 163/290 (56%), Positives = 210/290 (72%)
Query: 1 MEKASKVLFIWKKEVESQKETASDIRRRNEALVYNILPPHVASHFLGNRKRQHEELYSQS 60
+EK ++ LF+WK EV QKE ++RR NEALV N+LP HVA HFLG++KR EELYSQS
Sbjct: 860 VEKLARTLFLWKIEVHDQKERVYEMRRWNEALVTNMLPEHVARHFLGSKKRD-EELYSQS 918
Query: 61 YAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFKEWSRPIKSL 120
Y E+GV+FAS+PNF++FY E+ +N G+ECLRFLNE+ISDFD SL
Sbjct: 919 YDEIGVMFASLPNFADFYTEESINNGGIECLRFLNEIISDFD----------------SL 962
Query: 121 LELPKFKEVIKIKTIGSTYMAASGLDPN-----FVATIKPSDPIEVRWKHLDVLIEFAME 175
L+ PKF+ + KIKTIGSTYMAASG+ P+ F ++ K + RW+HL L +FA+
Sbjct: 963 LDNPKFRVITKIKTIGSTYMAASGVTPDVNTNGFTSSSKEEKSDKERWQHLADLADFALA 1022
Query: 176 MKKALTGINEQSFNHFVLKMGVNHGPITAGVIGARKPHYDIWGNTVNVASRMESTGRAGF 235
MK LT IN QSFN+F+L++G+N G + AGVIGARKPHYDIWGNTVNVASRMESTG G
Sbjct: 1023 MKDTLTNINNQSFNNFMLRIGMNKGGVLAGVIGARKPHYDIWGNTVNVASRMESTGVMGN 1082
Query: 236 IQVTEETTHILQHFGYIFEQRGLVSVKGKGQLMTYYLLGKSTTGANYPSG 285
IQV EET IL+ +G+ F +RG + VKGKG+L+T++L G+ A +P+G
Sbjct: 1083 IQVVEETQVILREYGFRFVRRGPIFVKGKGELLTFFLKGRDRPAA-FPNG 1131
|
|
| UNIPROTKB|G3V6I2 Adcy3 "Adenylate cyclase type 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P156 ADCY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:99675 Adcy3 "adenylate cyclase 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PNQ0 ADCY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SDL2 ADCY3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MPC9 ADCY3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B3KT86 ADCY3 "Adenylate cyclase type 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O60266 ADCY3 "Adenylate cyclase type 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NGF1 ADCY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| pfam00211 | 184 | pfam00211, Guanylate_cyc, Adenylate and Guanylate | 2e-62 | |
| cd07302 | 177 | cd07302, CHD, cyclase homology domain | 1e-45 | |
| smart00044 | 194 | smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca | 4e-45 | |
| cd07556 | 133 | cd07556, Nucleotidyl_cyc_III, Class III nucleotidy | 3e-30 | |
| COG2114 | 227 | COG2114, CyaA, Adenylate cyclase, family 3 (some p | 1e-12 |
| >gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 2e-62
Identities = 85/220 (38%), Positives = 118/220 (53%), Gaps = 37/220 (16%)
Query: 56 LYSQSYAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFKEWSR 115
+Y+QSY V +LFA + F+ E +R LN++ + FD LL+
Sbjct: 1 VYAQSYDNVTILFADIVGFTALSSR----HSPEELVRLLNDLYTRFDELLDKHG------ 50
Query: 116 PIKSLLELPKFKEVIKIKTIGSTYMAASGLDPNFVATIKPSDPIEVRWKHLDVLIEFAME 175
V K+KTIG YMAASGL H L E A++
Sbjct: 51 -------------VYKVKTIGDAYMAASGLPEP-------------SPAHAQTLAEMALD 84
Query: 176 MKKALTGINEQSFNHFVLKMGVNHGPITAGVIGARKPHYDIWGNTVNVASRMESTGRAGF 235
M +A+ +N SF +++G++ GP+ AGVIGAR+P YD+WG+TVN+ASRMESTG G
Sbjct: 85 MLEAIKSVNIHSFEGLRVRVGIHTGPVVAGVIGARRPRYDVWGDTVNLASRMESTGVPGK 144
Query: 236 IQVTEETTHIL-QHFGYIFEQRGLVSVKGKGQLMTYYLLG 274
I V+EET +L + F +RG V VKGKG++ TY+L G
Sbjct: 145 IHVSEETYRLLKTREQFEFTERGEVEVKGKGKMETYFLNG 184
|
Length = 184 |
| >gnl|CDD|143636 cd07302, CHD, cyclase homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|143637 cd07556, Nucleotidyl_cyc_III, Class III nucleotidyl cyclases | Back alignment and domain information |
|---|
| >gnl|CDD|225025 COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| KOG4171|consensus | 671 | 100.0 | ||
| KOG3619|consensus | 867 | 100.0 | ||
| PF00211 | 184 | Guanylate_cyc: Adenylate and Guanylate cyclase cat | 100.0 | |
| smart00044 | 194 | CYCc Adenylyl- / guanylyl cyclase, catalytic domai | 100.0 | |
| KOG1023|consensus | 484 | 100.0 | ||
| COG2114 | 227 | CyaA Adenylate cyclase, family 3 (some proteins co | 100.0 | |
| KOG3619|consensus | 867 | 99.97 | ||
| cd07302 | 177 | CHD cyclase homology domain. Catalytic domains of | 99.97 | |
| KOG3618|consensus | 1318 | 99.97 | ||
| KOG3618|consensus | 1318 | 99.96 | ||
| cd07556 | 133 | Nucleotidyl_cyc_III Class III nucleotidyl cyclases | 99.39 | |
| PF05165 | 246 | GGDN: GGDN family; InterPro: IPR007839 GTP cyclohy | 94.88 | |
| PRK10245 | 366 | adrA diguanylate cyclase AdrA; Provisional | 94.15 | |
| COG2429 | 250 | Archaeal GTP cyclohydrolase III [Nucleotide transp | 93.59 | |
| COG2199 | 181 | c-di-GMP synthetase (diguanylate cyclase, GGDEF do | 89.72 | |
| COG3706 | 435 | PleD Response regulator containing a CheY-like rec | 89.47 | |
| PF00990 | 161 | GGDEF: GGDEF domain; InterPro: IPR000160 This doma | 89.05 | |
| PRK02240 | 254 | GTP cyclohydrolase III; Provisional | 88.05 | |
| PF10851 | 116 | DUF2652: Protein of unknown function (DUF2652) ; I | 87.72 | |
| PRK09966 | 407 | putative inner membrane diguanylate cyclase; Provi | 86.99 | |
| PRK09894 | 296 | diguanylate cyclase; Provisional | 85.42 | |
| TIGR02577 | 482 | cas_TM1794_Crm2 CRISPR-associated protein, Crm2 fa | 85.09 | |
| smart00267 | 163 | GGDEF diguanylate cyclase. Diguanylate cyclase, pr | 84.19 | |
| PRK02240 | 254 | GTP cyclohydrolase III; Provisional | 83.46 | |
| PRK15426 | 570 | putative diguanylate cyclase YedQ; Provisional | 82.92 | |
| PRK11059 | 640 | regulatory protein CsrD; Provisional | 81.93 | |
| COG3887 | 655 | Predicted signaling protein consisting of a modifi | 81.0 | |
| TIGR00254 | 165 | GGDEF diguanylate cyclase (GGDEF) domain. The GGDE | 80.34 |
| >KOG4171|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=358.08 Aligned_cols=227 Identities=30% Similarity=0.573 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHhcCCcccccccccceeeeEEEEEEecCCccccccccccccchHHHH
Q psy16053 12 KKEVESQKETASDIRRRNEALVYNILPPHVASHFLGNRKRQHEELYSQSYAEVGVLFASMPNFSEFYCEDDVNKQGLECL 91 (351)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~lL~~~lP~~v~~~l~~~~~~~~~~~~~~~~~~vtVlF~Di~gft~l~~~~~~~~~~~~~~ 91 (351)
+.++++..++|+.+|++...||++++|+.||+.|..+ +.....++.+|||||+||++||.++..+. |.+++
T Consensus 396 ~~~Le~~~~~Le~EKkkTd~LLy~mlP~~VA~qLr~g-----~~v~a~~f~~vTilFsdIv~Ft~ic~~ct----p~~vV 466 (671)
T KOG4171|consen 396 KEKLEKMTRELEEEKKKTDTLLYSMLPRSVAQQLRQG-----ESVDAKEFDDVTILFSDIVGFTAICSQCT----PMQVV 466 (671)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHcC-----CCcCccccCceEEEEeccchHHhHhhccC----cHHHH
Confidence 7778888899999999999999999999999999554 57778889999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHHHcccccccccccccccccCCCccCEEEEEEeCceEEEeeCCCcCccCCCCCCCchhhhHHHHHHHHH
Q psy16053 92 RFLNEVISDFDALLELPKFKEWSRPIKSLLELPKFKEVIKIKTIGSTYMAASGLDPNFVATIKPSDPIEVRWKHLDVLIE 171 (351)
Q Consensus 92 ~~Ln~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gg~~vk~iGD~~ma~fG~p~~~~~~~~p~~~~~~~~~~a~~Av~ 171 (351)
.+||++|+.||+++..| ++|++.|+||+||++.|+|.... .||..++.
T Consensus 467 ~~LN~lyt~fD~~i~~~-------------------~VYKVETIGDaYm~vsG~P~~~~-------------~HAe~i~~ 514 (671)
T KOG4171|consen 467 NMLNELYTRFDRIIDTH-------------------DVYKVETIGDAYMVVSGLPDASD-------------YHAEHIAD 514 (671)
T ss_pred HHHHHHHHHHHHhhccc-------------------CeEEEeeccchheeecCCCCCCh-------------hHHHHHHH
Confidence 99999999999999998 99999999999999999998866 99999999
Q ss_pred HHHHHHHHHHHHhhcc-CCceEEEEEEeeecEEEEeeCCCCcceeEeCchHHHHHHHHhcCCCCcEEeCHHHHHHhhcCC
Q psy16053 172 FAMEMKKALTGINEQS-FNHFVLKMGVNHGPITAGVIGARKPHYDIWGNTVNVASRMESTGRAGFIQVTEETTHILQHFG 250 (351)
Q Consensus 172 ~Al~m~~~l~~~~~~~-~~~l~lrIGIhtG~v~~G~iG~~~~~~~v~Gd~VN~AaRLe~~a~~g~I~vSe~~~~~l~~~~ 250 (351)
+||.|+......-.+. ..++.+|||||+|||++|+||.+.|+|.+||++||+|+|||+.+.||.|+||+.||+.+...+
T Consensus 515 ~AL~Mm~~ak~v~~p~~~~pi~iRiGIHsG~VvAGVVG~kmPRYCLFGdTVn~AsrmES~s~p~KI~vS~~T~~~l~~~~ 594 (671)
T KOG4171|consen 515 LALGMMEEAKEVVSPVTGEPIQIRIGIHSGPVVAGVVGVKMPRYCLFGDTVNLASRMESSSVPGKINVSPTTYRKLKKQG 594 (671)
T ss_pred HHHHHHHHhhhhcCcCCCCceEEEEEeccCCeeeeeecccccceeecCCchhhhhhhhcCCCCceEEeCHHHHHHHHhCC
Confidence 9999999998876553 678999999999999999999999999999999999999999999999999999999999874
Q ss_pred -eeEEEcceEEecCcCceEEEEEeeccCCC
Q psy16053 251 -YIFEQRGLVSVKGKGQLMTYYLLGKSTTG 279 (351)
Q Consensus 251 -~~~~~~g~v~lKG~~~~~~~~~~~~~~~~ 279 (351)
|.|.++|.+.+||++...+||+.....+.
T Consensus 595 ~f~f~pRg~v~vk~kg~m~tyFL~~~~~~~ 624 (671)
T KOG4171|consen 595 SFEFEPRGRVEVKGKGPMETYFLERSLGPS 624 (671)
T ss_pred CceeeecCccccCCCCceEEEEEEecCCCC
Confidence 99999999999999998999988766554
|
|
| >KOG3619|consensus | Back alignment and domain information |
|---|
| >PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4 | Back alignment and domain information |
|---|
| >smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain | Back alignment and domain information |
|---|
| >KOG1023|consensus | Back alignment and domain information |
|---|
| >COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3619|consensus | Back alignment and domain information |
|---|
| >cd07302 CHD cyclase homology domain | Back alignment and domain information |
|---|
| >KOG3618|consensus | Back alignment and domain information |
|---|
| >KOG3618|consensus | Back alignment and domain information |
|---|
| >cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases | Back alignment and domain information |
|---|
| >PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP | Back alignment and domain information |
|---|
| >PRK10245 adrA diguanylate cyclase AdrA; Provisional | Back alignment and domain information |
|---|
| >COG2429 Archaeal GTP cyclohydrolase III [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG2199 c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00990 GGDEF: GGDEF domain; InterPro: IPR000160 This domain appears to be ubiquitous in bacteria and is often linked to a regulatory domain, such as a phosphorylation receiver or oxygen sensing domain | Back alignment and domain information |
|---|
| >PRK02240 GTP cyclohydrolase III; Provisional | Back alignment and domain information |
|---|
| >PF10851 DUF2652: Protein of unknown function (DUF2652) ; InterPro: IPR020503 This entry contains proteins with no known function | Back alignment and domain information |
|---|
| >PRK09966 putative inner membrane diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
| >PRK09894 diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
| >TIGR02577 cas_TM1794_Crm2 CRISPR-associated protein, Crm2 family | Back alignment and domain information |
|---|
| >smart00267 GGDEF diguanylate cyclase | Back alignment and domain information |
|---|
| >PRK02240 GTP cyclohydrolase III; Provisional | Back alignment and domain information |
|---|
| >PRK15426 putative diguanylate cyclase YedQ; Provisional | Back alignment and domain information |
|---|
| >PRK11059 regulatory protein CsrD; Provisional | Back alignment and domain information |
|---|
| >COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00254 GGDEF diguanylate cyclase (GGDEF) domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 351 | ||||
| 1azs_B | 212 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 5e-63 | ||
| 1ab8_A | 220 | Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COM | 6e-63 | ||
| 1cul_B | 208 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 2e-62 | ||
| 1yk9_A | 204 | Crystal Structure Of A Mutant Form Of The Mycobacte | 5e-25 | ||
| 3et6_B | 190 | The Crystal Structure Of The Catalytic Domain Of A | 5e-22 | ||
| 3et6_A | 190 | The Crystal Structure Of The Catalytic Domain Of A | 7e-22 | ||
| 2wz1_A | 219 | Structure Of The Catalytic Domain Of Human Soluble | 8e-18 | ||
| 3uvj_B | 220 | Crystal Structure Of The Catalytic Domain Of The He | 4e-17 | ||
| 1cs4_A | 225 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 2e-15 | ||
| 1azs_A | 220 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 2e-15 | ||
| 1cjk_A | 217 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 2e-15 | ||
| 3uvj_A | 225 | Crystal Structure Of The Catalytic Domain Of The He | 3e-07 | ||
| 3r5g_A | 198 | Crystal Structure Of The Adenylyl Cyclase Cyab From | 1e-05 |
| >pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 212 | Back alignment and structure |
|
| >pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX Length = 220 | Back alignment and structure |
| >pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg Length = 208 | Back alignment and structure |
| >pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial Adenylyl Cyclase Rv1625c Length = 204 | Back alignment and structure |
| >pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190 | Back alignment and structure |
| >pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190 | Back alignment and structure |
| >pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble Guanylate Cyclase 1 Beta 3. Length = 219 | Back alignment and structure |
| >pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 220 | Back alignment and structure |
| >pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And Mg Length = 225 | Back alignment and structure |
| >pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 220 | Back alignment and structure |
| >pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With Adenosine 5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn Length = 217 | Back alignment and structure |
| >pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 225 | Back alignment and structure |
| >pdb|3R5G|A Chain A, Crystal Structure Of The Adenylyl Cyclase Cyab From P. Aeruginosa Length = 198 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 351 | |||
| 1ab8_A | 220 | Adenylyl cyclase; lyase, complex (transferase-inhi | 1e-106 | |
| 2wz1_A | 219 | Guanylate cyclase soluble subunit beta-1; lyase, G | 6e-64 | |
| 1yk9_A | 204 | Adenylate cyclase; beta-alpha-beta sandwich, struc | 1e-57 | |
| 3et6_A | 190 | Soluble guanylyl cyclase beta; guanylate cyclase, | 7e-50 | |
| 1azs_A | 220 | VC1; complex (lyase/hydrolase), hydrolase, signal | 6e-49 | |
| 3uvj_A | 225 | Guanylate cyclase soluble subunit alpha-3; nitric | 2e-48 | |
| 1y10_A | 407 | Hypothetical protein RV1264/MT1302; adenylyl cycla | 3e-29 | |
| 1fx2_A | 235 | Receptor-type adenylate cyclase gresag 4.1; CAMP, | 4e-22 | |
| 1ybt_A | 184 | Hydrolase, alpha/beta hydrolase fold family; cycla | 2e-17 | |
| 2w01_A | 208 | Adenylate cyclase; guanylyl cyclase, class III nuc | 4e-15 | |
| 3r5g_A | 198 | CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas | 1e-13 | |
| 3mr7_A | 189 | Adenylate/guanylate cyclase/hydrolase, alpha/beta | 1e-13 | |
| 1wc3_A | 219 | Adenylate cyclase; soluble adenylyl cyclase, CAMP | 4e-12 |
| >1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220 | Back alignment and structure |
|---|
Score = 309 bits (794), Expect = e-106
Identities = 120/233 (51%), Positives = 155/233 (66%), Gaps = 18/233 (7%)
Query: 52 QHEELYSQSYAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFK 111
++EELY QSY V V+FAS+P+F EFY E DVNK+GLECLR LNE+I+DFD LL PKF
Sbjct: 3 KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFS 62
Query: 112 EWSRPIKSLLELPKFKEVIKIKTIGSTYMAASGLDPNFVATIKPSDPIEVRWKHLDVLIE 171
V KIKTIGSTYMAA+GL + + + E ++ H+ ++E
Sbjct: 63 G----------------VEKIKTIGSTYMAATGLSAI--PSQEHAQEPERQYMHIGTMVE 104
Query: 172 FAMEMKKALTGINEQSFNHFVLKMGVNHGPITAGVIGARKPHYDIWGNTVNVASRMESTG 231
FA + L IN+ SFN F L++G+NHGP+ AGVIGA+KP YDIWGNTVNVASRM+STG
Sbjct: 105 FAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 164
Query: 232 RAGFIQVTEETTHILQHFGYIFEQRGLVSVKGKGQLMTYYLLGKSTTGANYPS 284
IQVTEET+ ILQ GY RG+++VKGKG L TY++ + + + +
Sbjct: 165 VLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVNTEMSRSLSQSN 217
|
| >2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219 | Back alignment and structure |
|---|
| >1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204 | Back alignment and structure |
|---|
| >3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190 | Back alignment and structure |
|---|
| >1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220 | Back alignment and structure |
|---|
| >3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225 | Back alignment and structure |
|---|
| >1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Length = 407 | Back alignment and structure |
|---|
| >1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Length = 235 | Back alignment and structure |
|---|
| >1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Length = 184 | Back alignment and structure |
|---|
| >2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Length = 208 | Back alignment and structure |
|---|
| >3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} Length = 198 | Back alignment and structure |
|---|
| >3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Length = 189 | Back alignment and structure |
|---|
| >1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Length = 219 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| 1ab8_A | 220 | Adenylyl cyclase; lyase, complex (transferase-inhi | 100.0 | |
| 2wz1_A | 219 | Guanylate cyclase soluble subunit beta-1; lyase, G | 100.0 | |
| 1yk9_A | 204 | Adenylate cyclase; beta-alpha-beta sandwich, struc | 100.0 | |
| 3et6_A | 190 | Soluble guanylyl cyclase beta; guanylate cyclase, | 100.0 | |
| 2w01_A | 208 | Adenylate cyclase; guanylyl cyclase, class III nuc | 100.0 | |
| 3uvj_A | 225 | Guanylate cyclase soluble subunit alpha-3; nitric | 100.0 | |
| 3r5g_A | 198 | CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas | 100.0 | |
| 1azs_A | 220 | VC1; complex (lyase/hydrolase), hydrolase, signal | 100.0 | |
| 1wc3_A | 219 | Adenylate cyclase; soluble adenylyl cyclase, CAMP | 100.0 | |
| 1fx2_A | 235 | Receptor-type adenylate cyclase gresag 4.1; CAMP, | 100.0 | |
| 1ybt_A | 184 | Hydrolase, alpha/beta hydrolase fold family; cycla | 100.0 | |
| 1y10_A | 407 | Hypothetical protein RV1264/MT1302; adenylyl cycla | 100.0 | |
| 3mr7_A | 189 | Adenylate/guanylate cyclase/hydrolase, alpha/beta | 100.0 | |
| 3hls_A | 66 | Guanylate cyclase soluble subunit beta-1; coiled-c | 96.91 | |
| 3i5c_A | 206 | Fusion of general control protein GCN4 and WSPR R | 94.2 | |
| 3ezu_A | 342 | Ggdef domain protein; multidomain protein of unkno | 92.52 | |
| 2qv6_A | 268 | MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY | 91.86 | |
| 3tvk_A | 179 | DGC, diguanylate cyclase YDEH; putative zinc senso | 90.24 | |
| 3hva_A | 177 | Protein FIMX; ggdef diguanylate cyclase, biofilm, | 89.35 | |
| 3ign_A | 177 | Diguanylate cyclase; ggdef domain, A1U3W3_marav, N | 86.63 | |
| 3icl_A | 171 | EAL/ggdef domain protein; structural genomics, PSI | 84.34 | |
| 3mtk_A | 178 | Diguanylate cyclase/phosphodiesterase; structural | 84.11 | |
| 3qyy_A | 167 | Response regulator; C-DI-GMP, DGC, ggdef, competit | 82.6 |
| >1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=321.38 Aligned_cols=209 Identities=57% Similarity=0.926 Sum_probs=160.0
Q ss_pred cccccccceeeeEEEEEEecCCccccccccccccchHHHHHHHHHHHHHHHHHHcccccccccccccccccCCCccCEEE
Q psy16053 52 QHEELYSQSYAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFKEWSRPIKSLLELPKFKEVIK 131 (351)
Q Consensus 52 ~~~~~~~~~~~~vtVlF~Di~gft~l~~~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gg~~ 131 (351)
.++.++.++++++||||+||+|||.+++.++....|++++.+||++|..|+.++.+| +|.||++
T Consensus 3 ~~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~----------------~~~g~~~ 66 (220)
T 1ab8_A 3 KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKP----------------KFSGVEK 66 (220)
T ss_dssp ----CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSG----------------GGTTEEE
T ss_pred CCCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhh----------------ccCCeEE
Confidence 346788899999999999999999999988644447899999999999999999986 3338999
Q ss_pred EEEeCceEEEeeCCCcCccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEEEeeecEEEEeeCCCC
Q psy16053 132 IKTIGSTYMAASGLDPNFVATIKPSDPIEVRWKHLDVLIEFAMEMKKALTGINEQSFNHFVLKMGVNHGPITAGVIGARK 211 (351)
Q Consensus 132 vk~iGD~~ma~fG~p~~~~~~~~p~~~~~~~~~~a~~Av~~Al~m~~~l~~~~~~~~~~l~lrIGIhtG~v~~G~iG~~~ 211 (351)
+|++||+|||+||+|.....+ ..+..+...+|+.+|++||++|++.+..++.....++.+|||||+|+|++|++|..+
T Consensus 67 ik~iGD~~ma~fg~p~~~~~~--~~~~~~~~~~~a~~a~~~Al~~~~~l~~~~~~~~~~l~~rIGIh~G~v~~G~iG~~r 144 (220)
T 1ab8_A 67 IKTIGSTYMAATGLSAIPSQE--HAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQK 144 (220)
T ss_dssp EEEETTEEEEEECCCCSCCC----------CCHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCEEEEEEEEEEEEEECSSS
T ss_pred EEEeCceEEEEECCCcccccc--ccccccccHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEEEEeeeEEEEeecCCc
Confidence 999999999999998731100 000001122899999999999999999998877778999999999999999999998
Q ss_pred cceeEeCchHHHHHHHHhcCCCCcEEeCHHHHHHhhcCCeeEEEcceEEecCcCceEEEEEeeccCC
Q psy16053 212 PHYDIWGNTVNVASRMESTGRAGFIQVTEETTHILQHFGYIFEQRGLVSVKGKGQLMTYYLLGKSTT 278 (351)
Q Consensus 212 ~~~~v~Gd~VN~AaRLe~~a~~g~I~vSe~~~~~l~~~~~~~~~~g~v~lKG~~~~~~~~~~~~~~~ 278 (351)
++||+||++||+|+||+++|++|+|+||+++++.+...+|.|+++|.+.+||++.|++||+..+...
T Consensus 145 ~~y~v~Gd~VN~AaRle~~a~~g~I~vS~~~~~~l~~~~~~~~~~g~~~lKG~~~~~~~~~~~~~~~ 211 (220)
T 1ab8_A 145 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVNTEMSR 211 (220)
T ss_dssp CEEEEESHHHHHHHHHHHTCCTTCEEECHHHHHHHHHHTCCCCC---------------CCC-----
T ss_pred eeEEEECcHHHHHHHHHhcCCCCeEEECHHHHHHhhcCceEEEEeccEEecCCCceEEEEEecccCC
Confidence 9999999999999999999999999999999999987459999999999999999999998876543
|
| >2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B | Back alignment and structure |
|---|
| >1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B | Back alignment and structure |
|---|
| >2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} | Back alignment and structure |
|---|
| >3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} | Back alignment and structure |
|---|
| >3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0 | Back alignment and structure |
|---|
| >1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* | Back alignment and structure |
|---|
| >1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* | Back alignment and structure |
|---|
| >1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A | Back alignment and structure |
|---|
| >1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* | Back alignment and structure |
|---|
| >1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* | Back alignment and structure |
|---|
| >3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
| >3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A* | Back alignment and structure |
|---|
| >3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
| >2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
| >3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
| >3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8} | Back alignment and structure |
|---|
| >3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus} | Back alignment and structure |
|---|
| >3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus} | Back alignment and structure |
|---|
| >3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 351 | ||||
| d1azsb_ | 199 | d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a { | 1e-41 | |
| d1azsa_ | 190 | d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D | 7e-22 | |
| d1fx2a_ | 235 | d.58.29.1 (A:) Receptor-type monomeric adenylyl cy | 5e-18 | |
| d1wc1a_ | 197 | d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p | 7e-17 |
| >d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Nucleotide cyclase family: Adenylyl and guanylyl cyclase catalytic domain domain: Adenylyl cyclase IIC1, domain C2a species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 141 bits (357), Expect = 1e-41
Identities = 116/214 (54%), Positives = 146/214 (68%), Gaps = 18/214 (8%)
Query: 59 QSYAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFKEWSRPIK 118
QSY V V+FAS+P+F EFY E DVNK+GLECLR LNE+I+DFD LL PKF
Sbjct: 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSG------ 55
Query: 119 SLLELPKFKEVIKIKTIGSTYMAASGLDPNFVATIKPSDPIEVRWKHLDVLIEFAMEMKK 178
V KIKTIGSTYMAA+GL + + + + E ++ H+ ++EFA +
Sbjct: 56 ----------VEKIKTIGSTYMAATGLSA--IPSQEHAQEPERQYMHIGTMVEFAYALVG 103
Query: 179 ALTGINEQSFNHFVLKMGVNHGPITAGVIGARKPHYDIWGNTVNVASRMESTGRAGFIQV 238
L IN+ SFN F L++G+NHGP+ AGVIGA+KP YDIWGNTVNVASRM+STG IQV
Sbjct: 104 KLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQV 163
Query: 239 TEETTHILQHFGYIFEQRGLVSVKGKGQLMTYYL 272
TEET+ ILQ GY RG+++VKGKG L TY++
Sbjct: 164 TEETSLILQTLGYTCTCRGIINVKGKGDLKTYFV 197
|
| >d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190 | Back information, alignment and structure |
|---|
| >d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235 | Back information, alignment and structure |
|---|
| >d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 351 | |||
| d1azsb_ | 199 | Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor | 100.0 | |
| d1azsa_ | 190 | Adenylyl cyclase VC1, domain C1a {Dog (Canis famil | 100.0 | |
| d1wc1a_ | 197 | Adenylate cyclase CyaC {Spirulina platensis [TaxId | 100.0 | |
| d1fx2a_ | 235 | Receptor-type monomeric adenylyl cyclase {Trypanos | 100.0 | |
| d1w25a3 | 162 | Response regulator PleD, C-terminal domain {Caulob | 83.76 |
| >d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Nucleotide cyclase family: Adenylyl and guanylyl cyclase catalytic domain domain: Adenylyl cyclase IIC1, domain C2a species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.3e-41 Score=302.13 Aligned_cols=196 Identities=59% Similarity=0.958 Sum_probs=169.6
Q ss_pred ceeeeEEEEEEecCCccccccccccccchHHHHHHHHHHHHHHHHHHcccccccccccccccccCCCccCEEEEEEeCce
Q psy16053 59 QSYAEVGVLFASMPNFSEFYCEDDVNKQGLECLRFLNEVISDFDALLELPKFKEWSRPIKSLLELPKFKEVIKIKTIGST 138 (351)
Q Consensus 59 ~~~~~vtVlF~Di~gft~l~~~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gg~~vk~iGD~ 138 (351)
+++.+|||||+||+|||.+++.++....|.+++++||++++.|+.++... +.+||+++|++||+
T Consensus 2 ~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~~~~~Ln~~~~~fd~~~~~~----------------~~~g~~~~k~iGD~ 65 (199)
T d1azsb_ 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKP----------------KFSGVEKIKTIGST 65 (199)
T ss_dssp CEEEEEEEEEEECTTHHHHCCCCTTTTTTHHHHHHHHHHHHHHHGGGGSG----------------GGTTEEEEEEETTE
T ss_pred CCCCcEEEEEEEcCCChHHHHhCCcccCHHHHHHHHHHHHHHHHHHHHHH----------------hccCcEEEEEecCe
Confidence 46788999999999999999998877778899999999999999998873 22299999999999
Q ss_pred EEEeeCCCcCccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEEEeeecEEEEeeCCCCcceeEeC
Q psy16053 139 YMAASGLDPNFVATIKPSDPIEVRWKHLDVLIEFAMEMKKALTGINEQSFNHFVLKMGVNHGPITAGVIGARKPHYDIWG 218 (351)
Q Consensus 139 ~ma~fG~p~~~~~~~~p~~~~~~~~~~a~~Av~~Al~m~~~l~~~~~~~~~~l~lrIGIhtG~v~~G~iG~~~~~~~v~G 218 (351)
|||+||+|..... .+...+.....++.+|+.+|++|++.+..++.....++++|||||+|+|++|++|..+++||+||
T Consensus 66 ~~a~~g~~~~~~~--~~a~~~~~~~~~~~~av~~a~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~Gv~g~~~~~y~v~G 143 (199)
T d1azsb_ 66 YMAATGLSAIPSQ--EHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWG 143 (199)
T ss_dssp EEEEESSSCC------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEEEEEEEEEECSSSCEEEEES
T ss_pred EEEEecCCCCccc--ccccchHHHHHhHHHHHHHHHHHHHHhhhccccCCCCeeEEeeeeecCceeeeeccccccccccc
Confidence 9999999874321 00011233446899999999999999999988888889999999999999999999999999999
Q ss_pred chHHHHHHHHhcCCCCcEEeCHHHHHHhhcCCeeEEEcceEEecCcCceEEEEE
Q psy16053 219 NTVNVASRMESTGRAGFIQVTEETTHILQHFGYIFEQRGLVSVKGKGQLMTYYL 272 (351)
Q Consensus 219 d~VN~AaRLe~~a~~g~I~vSe~~~~~l~~~~~~~~~~g~v~lKG~~~~~~~~~ 272 (351)
|+||+|+|||+.|++|+|+||++||+.+.+.+|.++++|.+.+||++...+||+
T Consensus 144 d~VN~AaRle~~a~~g~I~vS~~t~~~l~~~~~~~~~~g~i~vKGkg~~~ty~l 197 (199)
T d1azsb_ 144 NTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFV 197 (199)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEHHHHHHHHHTTCCEEEEEEEEETTTEEEEEEEE
T ss_pred hHHHHHHHHHhcCCCCeEEECHHHHHHHhcCCeEEEEeCCEEecCCCeEEEEEE
Confidence 999999999999999999999999999988679999999999999998666665
|
| >d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} | Back information, alignment and structure |
|---|
| >d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} | Back information, alignment and structure |
|---|
| >d1w25a3 d.58.29.2 (A:294-455) Response regulator PleD, C-terminal domain {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
|---|