Psyllid ID: psy16172

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
MNIYSFDLGLIGPLRAQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPLWPRGQEQ
cccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEccccccccccEEEEEcEEEEEEEEEccccccccccHHHHHHcHHHHHHHHHHHHcccEEEEEcccccccccccccc
ccEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccccccEEccccEcccccccccHHHHEcccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEEEcccc
mniysfdlgligPLRAQYLALTYAMnhadmgnpdrepcpysgspnfarqggitngAKWYVVTGgmqdfnylssndFELTLelgcvkfppaellpnewERNKNALVEFMWKVSKSLWAtsiggkrlplwprgqeq
mniysfdlglIGPLRAQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLwatsiggkrlplwprgqeq
MNIYSFDLGLIGPLRAQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPLWPRGQEQ
**IYSFDLGLIGPLRAQYLALTYAMNHA*****************FARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPLW******
MNIYSFDLGLIGPLRAQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRL*********
MNIYSFDLGLIGPLRAQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPLWPRGQEQ
MNIYSFDLGLIGPLRAQYLALTYAMNHAD*G**DREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPLWPRG***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNIYSFDLGLIGPLRAQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPLWPRGQEQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query134 2.2.26 [Sep-21-2011]
P04836475 Carboxypeptidase E OS=Bos yes N/A 0.731 0.206 0.494 3e-21
Q90240 1389 Carboxypeptidase D OS=Ana N/A N/A 0.708 0.068 0.480 1e-20
P83852380 Carboxypeptidase D (Fragm N/A N/A 0.716 0.252 0.475 1e-20
A5A6K7476 Carboxypeptidase E OS=Pan yes N/A 0.731 0.205 0.464 4e-20
Q4R4M3476 Carboxypeptidase E OS=Mac N/A N/A 0.731 0.205 0.474 4e-20
P16870476 Carboxypeptidase E OS=Hom yes N/A 0.731 0.205 0.464 1e-19
Q00493476 Carboxypeptidase E OS=Mus yes N/A 0.731 0.205 0.464 1e-19
P15087476 Carboxypeptidase E OS=Rat yes N/A 0.731 0.205 0.464 1e-19
O75976 1380 Carboxypeptidase D OS=Hom no N/A 0.776 0.075 0.473 4e-19
P37892454 Carboxypeptidase E OS=Lop N/A N/A 0.708 0.209 0.469 5e-19
>sp|P04836|CBPE_BOVIN Carboxypeptidase E OS=Bos taurus GN=CPE PE=1 SV=2 Back     alignment and function desciption
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 64/99 (64%), Gaps = 1/99 (1%)

Query: 17  QYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDF 76
           Q LA  Y+  +  M +PDR PC      + +   G TNGA WY V GGMQDFNYLSSN F
Sbjct: 278 QSLARAYSSFNPPMSDPDRPPC-RKNDDDSSFVEGTTNGAAWYSVPGGMQDFNYLSSNCF 336

Query: 77  ELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSL 115
           E+T+EL C KFPP E L N WE NKN+L+ ++ ++ + +
Sbjct: 337 EITVELSCEKFPPEETLKNYWEDNKNSLISYIQQIHRGV 375
Removes residual C-terminal Arg or Lys remaining after initial endoprotease cleavage during prohormone processing.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 4EC: .EC: 1EC: 7EC: .EC: 1EC: 0
>sp|Q90240|CBPD_ANAPL Carboxypeptidase D OS=Anas platyrhynchos GN=CPD PE=1 SV=1 Back     alignment and function description
>sp|P83852|CBPD_LOPSP Carboxypeptidase D (Fragment) OS=Lophonetta specularioides GN=CPD PE=1 SV=1 Back     alignment and function description
>sp|A5A6K7|CBPE_PANTR Carboxypeptidase E OS=Pan troglodytes GN=CPE PE=2 SV=1 Back     alignment and function description
>sp|Q4R4M3|CBPE_MACFA Carboxypeptidase E OS=Macaca fascicularis GN=CPE PE=2 SV=1 Back     alignment and function description
>sp|P16870|CBPE_HUMAN Carboxypeptidase E OS=Homo sapiens GN=CPE PE=1 SV=1 Back     alignment and function description
>sp|Q00493|CBPE_MOUSE Carboxypeptidase E OS=Mus musculus GN=Cpe PE=1 SV=2 Back     alignment and function description
>sp|P15087|CBPE_RAT Carboxypeptidase E OS=Rattus norvegicus GN=Cpe PE=1 SV=1 Back     alignment and function description
>sp|O75976|CBPD_HUMAN Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=2 Back     alignment and function description
>sp|P37892|CBPE_LOPAM Carboxypeptidase E OS=Lophius americanus GN=cpe PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query134
270015772 413 hypothetical protein TcasGA2_TC005137 [T 0.701 0.227 0.648 8e-31
189242016 475 PREDICTED: similar to Zinc carboxypeptid 0.701 0.197 0.648 8e-31
328697846 477 PREDICTED: carboxypeptidase E-like [Acyr 0.791 0.222 0.525 1e-27
242024513 487 carboxypeptidase E precursor, putative [ 0.805 0.221 0.535 3e-27
402593171 337 zinc carboxypeptidase [Wuchereria bancro 0.820 0.326 0.539 4e-27
393906263234 zinc carboxypeptidase [Loa loa] 0.776 0.444 0.557 2e-26
312104081 306 zinc carboxypeptidase [Loa loa] 0.776 0.339 0.557 3e-26
170595385 457 Zinc carboxypeptidase family protein [Br 0.820 0.240 0.530 4e-26
443726395 429 hypothetical protein CAPTEDRAFT_229247 [ 0.694 0.216 0.606 5e-26
273529764 466 zinc carboxypeptidase precursor [Steiner 0.776 0.223 0.528 8e-26
>gi|270015772|gb|EFA12220.1| hypothetical protein TcasGA2_TC005137 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 61/94 (64%), Positives = 74/94 (78%)

Query: 17  QYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDF 76
           ++LAL Y+ +H DM NP R  C  + S  F +QGGITNGAKWY + GGMQDFNYLSSNDF
Sbjct: 185 RHLALAYSTHHVDMANPTRGGCGDAHSDRFGKQGGITNGAKWYSLAGGMQDFNYLSSNDF 244

Query: 77  ELTLELGCVKFPPAELLPNEWERNKNALVEFMWK 110
           E+TLELGC K+PPA  L +EWERNKNAL+ F+W+
Sbjct: 245 EITLELGCDKYPPAYTLQHEWERNKNALINFIWQ 278

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|189242016|ref|XP_001807518.1| PREDICTED: similar to Zinc carboxypeptidase family protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328697846|ref|XP_003240457.1| PREDICTED: carboxypeptidase E-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242024513|ref|XP_002432672.1| carboxypeptidase E precursor, putative [Pediculus humanus corporis] gi|212518142|gb|EEB19934.1| carboxypeptidase E precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|402593171|gb|EJW87098.1| zinc carboxypeptidase [Wuchereria bancrofti] Back     alignment and taxonomy information
>gi|393906263|gb|EFO13755.2| zinc carboxypeptidase [Loa loa] Back     alignment and taxonomy information
>gi|312104081|ref|XP_003150314.1| zinc carboxypeptidase [Loa loa] Back     alignment and taxonomy information
>gi|170595385|ref|XP_001902361.1| Zinc carboxypeptidase family protein [Brugia malayi] gi|158590022|gb|EDP28804.1| Zinc carboxypeptidase family protein [Brugia malayi] Back     alignment and taxonomy information
>gi|443726395|gb|ELU13575.1| hypothetical protein CAPTEDRAFT_229247 [Capitella teleta] Back     alignment and taxonomy information
>gi|273529764|gb|ACZ98150.1| zinc carboxypeptidase precursor [Steinernema carpocapsae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query134
WB|WBGene00001189472 egl-21 [Caenorhabditis elegans 0.873 0.247 0.483 2.5e-25
ZFIN|ZDB-GENE-090313-267 681 cpz "carboxypeptidase Z" [Dani 0.694 0.136 0.577 4.6e-22
UNIPROTKB|P04836475 CPE "Carboxypeptidase E" [Bos 0.731 0.206 0.494 2.1e-21
UNIPROTKB|P83852380 CPD "Carboxypeptidase D" [Loph 0.708 0.25 0.480 2.2e-21
UNIPROTKB|J9NY64 423 CPE "Uncharacterized protein" 0.805 0.255 0.495 2.7e-21
UNIPROTKB|F1Q459374 CPE "Uncharacterized protein" 0.731 0.262 0.484 1.3e-20
UNIPROTKB|E1BYS4 1360 CPD "Uncharacterized protein" 0.708 0.069 0.490 2.1e-20
UNIPROTKB|Q90240 1389 CPD "Carboxypeptidase D" [Anas 0.708 0.068 0.480 5.9e-20
UNIPROTKB|E1BT19469 CPE "Uncharacterized protein" 0.731 0.208 0.464 1.2e-19
UNIPROTKB|P16870476 CPE "Carboxypeptidase E" [Homo 0.731 0.205 0.464 1.2e-19
WB|WBGene00001189 egl-21 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 291 (107.5 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 60/124 (48%), Positives = 76/124 (61%)

Query:    17 QYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDF 76
             ++LA +YA NHA M   D  PC  +    FARQGGITNGAKWY V GGMQDFNYL++N  
Sbjct:   265 RWLAKSYADNHAHMSKNDHAPCDGTSQDAFARQGGITNGAKWYSVAGGMQDFNYLATNAM 324

Query:    77 ELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVS---KSLWATSIGG---KRLPLWPR 130
             E+TLEL C K P    LP  WE N+ ++ E++WK     K +   ++ G   KR  +W R
Sbjct:   325 EITLELSCEKMPEGSQLPRFWEDNQKSIFEYVWKSHSGVKGMVVDAMTGEPIKRAVVWIR 384

Query:   131 -GQE 133
              G E
Sbjct:   385 NGTE 388
GO:0004181 "metallocarboxypeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016485 "protein processing" evidence=IMP
GO:0014055 "acetylcholine secretion" evidence=IMP
GO:0030424 "axon" evidence=IDA
GO:0043025 "neuronal cell body" evidence=IDA
GO:0031410 "cytoplasmic vesicle" evidence=IDA
GO:0004180 "carboxypeptidase activity" evidence=IMP
ZFIN|ZDB-GENE-090313-267 cpz "carboxypeptidase Z" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P04836 CPE "Carboxypeptidase E" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P83852 CPD "Carboxypeptidase D" [Lophonetta specularioides (taxid:75873)] Back     alignment and assigned GO terms
UNIPROTKB|J9NY64 CPE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q459 CPE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYS4 CPD "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q90240 CPD "Carboxypeptidase D" [Anas platyrhynchos (taxid:8839)] Back     alignment and assigned GO terms
UNIPROTKB|E1BT19 CPE "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P16870 CPE "Carboxypeptidase E" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
cd03858293 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypep 5e-46
cd03868293 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase 3e-35
cd03867315 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase s 7e-30
cd03869326 cd03869, M14_CPX_like, Peptidase M14 carboxypeptid 3e-27
cd03865323 cd03865, M14_CPE, Peptidase M14 carboxypeptidase s 5e-27
cd03863296 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidas 2e-26
cd03866292 cd03866, M14_CPM, Peptidase M14 carboxypeptidase s 8e-25
cd03864313 cd03864, M14_CPN, Peptidase M14 carboxypeptidase s 2e-22
cd06245284 cd06245, M14_CPD_III, Peptidase M14 carboxypeptida 5e-16
pfam00246277 pfam00246, Peptidase_M14, Zinc carboxypeptidase 9e-12
smart00631277 smart00631, Zn_pept, Zn_pept domain 8e-07
cd00596211 cd00596, Peptidase_M14_like, M14 family of metallo 4e-05
>gnl|CDD|199842 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily N/E-like Back     alignment and domain information 
 Score =  150 bits (381), Expect = 5e-46
 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 17  QYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDF 76
           +YLA TYA  H  M       C    + + +  GGITNGA WY V+GGMQD+NYL +N F
Sbjct: 204 RYLAKTYANAHPTMHKGQPCCC----NDDESFPGGITNGAAWYSVSGGMQDYNYLHTNCF 259

Query: 77  ELTLELGCVKFPPAELLPNEWERNKNALVEFMWK 110
           E+TLEL C KFPPA  LP  WE NK AL+ ++ +
Sbjct: 260 EITLELSCCKFPPASELPKFWEENKEALLNYIEQ 293

Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. Length = 293
>gnl|CDD|199850 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup Back     alignment and domain information
>gnl|CDD|199849 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup Back     alignment and domain information
>gnl|CDD|199851 cd03869, M14_CPX_like, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup Back     alignment and domain information
>gnl|CDD|199847 cd03865, M14_CPE, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup Back     alignment and domain information
>gnl|CDD|199845 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup Back     alignment and domain information
>gnl|CDD|199848 cd03866, M14_CPM, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup Back     alignment and domain information
>gnl|CDD|199846 cd03864, M14_CPN, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup Back     alignment and domain information
>gnl|CDD|199867 cd06245, M14_CPD_III, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup Back     alignment and domain information
>gnl|CDD|215816 pfam00246, Peptidase_M14, Zinc carboxypeptidase Back     alignment and domain information
>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain Back     alignment and domain information
>gnl|CDD|199839 cd00596, Peptidase_M14_like, M14 family of metallocarboxypeptidases and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 134
cd03865402 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C 100.0
cd03869405 M14_CPX_like Peptidase M14-like domain of carboxyp 100.0
KOG2649|consensus 500 100.0
cd03864392 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als 100.0
cd06245363 M14_CPD_III The third carboxypeptidase (CP)-like d 100.0
cd03863375 M14_CPD_II The second carboxypeptidase (CP)-like d 100.0
cd03866376 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM 100.0
cd03867395 M14_CPZ Peptidase M14-like domain of carboxypeptid 100.0
cd03868372 M14_CPD_I The first carboxypeptidase (CP)-like dom 100.0
cd03858374 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub 99.96
cd06226293 M14_CPT_like Peptidase M14-like domain of an uncha 99.42
cd03859295 M14_CPT Peptidase M14-like domain of carboxypeptid 99.31
PF00246279 Peptidase_M14: Zinc carboxypeptidase This is famil 99.23
cd00596196 Peptidase_M14_like The M14 family of metallocarbox 98.88
cd06248304 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/ 98.83
cd03860294 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase 98.75
cd03871300 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) bel 98.75
cd03870301 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA 98.55
cd06246300 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (C 98.53
smart00631277 Zn_pept Zn_pept. 98.4
cd06247298 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO 97.65
cd06229255 M14_Endopeptidase_I Peptidase M14-like domain of G 96.32
cd06227272 Peptidase_M14-like_2 A functionally uncharacterize 91.44
cd03872300 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also know 89.13
cd03862273 Peptidase_M14-like_7 A functionally uncharacterize 84.03
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 Back     alignment and domain information 
Probab=100.00  E-value=2.3e-59  Score=403.19  Aligned_cols=125  Identities=42%  Similarity=0.726  Sum_probs=114.6

Q ss_pred             CccccCCCCCCCCh---------h-HHHHHHHHHHhCccccCCCCCCCCCC-CCCCccCCCCceeceeeeeecCCccchh
Q psy16172          1 MNIYSFDLGLIGPL---------R-AQYLALTYAMNHADMGNPDREPCPYS-GSPNFARQGGITNGAKWYVVTGGMQDFN   69 (134)
Q Consensus         1 vanYPyD~~~~~~~---------~-F~~LA~~Ya~~h~~M~~~~~~~C~~~-~~~~F~~~~GItNGA~WY~v~GgMQD~n   69 (134)
                      |||||||.++++..         . ||+||++||.+||+|+++++.+|+.. .++.|  ++||||||+||+|.|||||||
T Consensus       205 va~YP~D~~~~~~~~~~s~~pDd~~f~~lA~~Ya~~h~~m~~~~~~~c~~~~~~~~f--~~GitNGa~Wy~~~GgmqD~n  282 (402)
T cd03865         205 VANYPYDETRSGSAHEYSACPDDAIFKSLARAYSSLNPAMSDPNRPPCRKNDDDSSF--VDGTTNGGAWYSVPGGMQDFN  282 (402)
T ss_pred             EEECCCCCCCCCCcccccCCCChHHHHHHHHHHHhhCHHhhcCCCCCCCCCCccccC--CCCeecCceecccCCcccchh
Confidence            79999999865432         1 99999999999999999777789753 24678  999999999999999999999


Q ss_pred             hhccceeeEEEeecccCCCCCCCcHHHHhhcHHHHHHHHHHhcccceeEEeCCcCcCC
Q psy16172         70 YLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPL  127 (134)
Q Consensus        70 Yl~tncfEiTlElsC~K~P~~~~L~~~W~~Nk~aLl~~~eqvH~GIkG~V~d~~~~~~  127 (134)
                      |++||||||||||||||||++++|+++|++||+|||+||+|||+||||+|+|.+|.||
T Consensus       283 y~~~nc~eiT~El~c~K~P~~~~L~~~W~~n~~all~~~~q~~~gI~G~V~D~~g~pI  340 (402)
T cd03865         283 YLSSNCFEITVELSCDKFPPEETLKQYWEDNKNSLVNYIEQVHRGVKGFVKDLQGNPI  340 (402)
T ss_pred             hhccCceEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHhccceEEEEECCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999888876

4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>KOG2649|consensus Back     alignment and domain information
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 Back     alignment and domain information
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 Back     alignment and domain information
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 Back     alignment and domain information
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 Back     alignment and domain information
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins Back     alignment and domain information
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification Back     alignment and domain information
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity Back     alignment and domain information
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E Back     alignment and domain information
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily Back     alignment and domain information
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>smart00631 Zn_pept Zn_pept Back     alignment and domain information
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3 Back     alignment and domain information
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3 Back     alignment and domain information
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3 Back     alignment and domain information
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
1qmu_A380 Duck Carboxypeptidase D Domain Ii Length = 380 1e-21
3mn8_A435 Structure Of Drosophila Melanogaster Carboxypeptida 6e-19
2nsm_A439 Crystal Structure Of The Human Carboxypeptidase N ( 1e-17
1uwy_A 426 Crystal Structure Of Human Carboxypeptidase M Lengt 8e-16
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii Length = 380 Back     alignment and structure 
Iteration: 1

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 7/103 (6%)
Query: 17  QYLALTYAMNHADM--GNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSN 74
           Q LAL+Y+  +  M  G+P ++  P    P+     GITNGA+WY V GGMQD+NYL++N
Sbjct: 208 QQLALSYSKENKKMYQGSPCKDLYPTEYFPH-----GITNGAQWYNVPGGMQDWNYLNTN 262
Query: 75  DFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWA 117
            FE+T+ELGCVK+P AE LP  WE+N+ +L++F+ +V + +W 
Sbjct: 263 CFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHRGIWG 305
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short Length = 435 Back     alignment and structure
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N (kininase I) Catalytic Domain Length = 439 Back     alignment and structure
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M Length = 426 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query134
1h8l_A380 Carboxypeptidase GP180 residues 503-882; hydrolase 7e-26
3mn8_A435 LP15968P; catalytic domain of alpha/beta-hydrolase 1e-24
1uwy_A 426 Carboxypeptidase M; metallopeptidase, GPI-anchor, 3e-24
2nsm_A439 Carboxypeptidase N catalytic chain; caroxypeptidas 9e-23
3prt_A323 Carboxypeptidase T; hydrolase; 1.66A {Thermoactino 7e-13
3b2y_A275 Metallopeptidase containing CO-catalytic metalloa 3e-06
2qvp_A275 Uncharacterized protein; putative metallopeptidase 1e-05
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Length = 380 Back     alignment and structure
 Score = 98.8 bits (246), Expect = 7e-26
 Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 3/101 (2%)

Query: 17  QYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDF 76
           Q LAL+Y+  +  M         Y   P      GITNGA+WY V GGMQD+NYL++N F
Sbjct: 208 QQLALSYSKENKKMYQGSPCKDLY---PTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCF 264

Query: 77  ELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWA 117
           E+T+ELGCVK+P AE LP  WE+N+ +L++F+ +V + +W 
Sbjct: 265 EVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHRGIWG 305
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Length = 435 Back     alignment and structure
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Length = 426 Back     alignment and structure
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439 Back     alignment and structure
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323 Back     alignment and structure
>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A* Length = 275 Back     alignment and structure
>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis} Length = 275 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query134
3mn8_A435 LP15968P; catalytic domain of alpha/beta-hydrolase 100.0
1h8l_A380 Carboxypeptidase GP180 residues 503-882; hydrolase 99.98
1uwy_A 426 Carboxypeptidase M; metallopeptidase, GPI-anchor, 99.98
2nsm_A439 Carboxypeptidase N catalytic chain; caroxypeptidas 99.97
3prt_A323 Carboxypeptidase T; hydrolase; 1.66A {Thermoactino 99.78
2c1c_A312 Carboxypeptidase B; insect, metalloprotease, insen 99.65
3dgv_A401 TAFI, carboxypeptidase B2; blood coagulation, fibr 99.64
1z5r_A306 Procarboxypeptidase B; exopeptidase, hydrolase; 1. 99.61
3d4u_A309 Tafia, carboxypeptidase B2; protease-inhibitor com 99.61
3v38_A326 Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Th 99.59
1m4l_A307 Carboxypeptidase A; metalloproteinase, metalloexop 99.54
2bo9_A308 Carboxypeptidase A4; metallocarboxypeptidase, X-RA 99.51
1dtd_A303 Carboxypeptidase A2; carboxypeptidase A2, leech ca 99.5
1kwm_A402 Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A 99.44
1jqg_A433 Carboxypeptidase A; Pro-protein, hydrolase; 2.50A 99.44
1pca_A403 Procarboxypeptidase A PCPA; hydrolase(C-terminal p 99.36
1aye_A401 PCPA2, procarboxypeptidase A2; serine protease, zy 99.33
2boa_A404 Carboxypeptidase A4; metalloprocarboxypeptidase, X 99.27
3b2y_A275 Metallopeptidase containing CO-catalytic metalloa 99.05
2qvp_A275 Uncharacterized protein; putative metallopeptidase 99.05
4axv_A243 MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi} 97.14
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Back     alignment and structure
Probab=100.00  E-value=7e-41  Score=286.86  Aligned_cols=119  Identities=43%  Similarity=0.772  Sum_probs=109.7

Q ss_pred             CccccCCCCCCC----------Chh-HHHHHHHHHHhCccccCCCCCCCCCCCCCCccCCCCceeceeeeeecCCccchh
Q psy16172          1 MNIYSFDLGLIG----------PLR-AQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFN   69 (134)
Q Consensus         1 vanYPyD~~~~~----------~~~-F~~LA~~Ya~~h~~M~~~~~~~C~~~~~~~F~~~~GItNGA~WY~v~GgMQD~n   69 (134)
                      +++||||.++..          ... |++||++||.+|+.|+.  +..|    ++.|  +.||||||.||++.||||||+
T Consensus       222 ~~~yPy~~~~~~~~~~~~~~~pd~~~~~~la~~~a~~~~~m~~--~~~c----~~~f--~~G~~nga~~Y~~~G~~~D~~  293 (435)
T 3mn8_A          222 VASYPYDNSLAHNECCEESLTPDDRVFKQLAHTYSDNHPIMRK--GNNC----NDSF--SGGITNGAHWYELSGGMQDFN  293 (435)
T ss_dssp             EEEESCSCCSSCCSBSCCCCCTTHHHHHHHHHHHHHTSTTTTT--SCGG----GCCC--GGGEEEHHHHBCCSSCHHHHH
T ss_pred             EEEcCCCCCcccccccccCCCCCHHHHHHHHHHHHHhhHHhhc--CCCc----cccC--CCCcccCceEeecCCchhhhh
Confidence            479999987631          111 99999999999999998  5589    5679  999999999999999999999


Q ss_pred             hhccceeeEEEeecccCCCCCCCcHHHHhhcHHHHHHHHHHhcccceeEEeCCcCcCC
Q psy16172         70 YLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSKSLWATSIGGKRLPL  127 (134)
Q Consensus        70 Yl~tncfEiTlElsC~K~P~~~~L~~~W~~Nk~aLl~~~eqvH~GIkG~V~d~~~~~~  127 (134)
                      |+++||||+||||+|+|||++++||.+|++||++||.+++|+|.||+|+|+|.+|.||
T Consensus       294 Y~~~~~~~~T~EL~~~k~p~~~~l~~~w~~n~~~ll~~~~~~~~gv~G~V~D~~G~pi  351 (435)
T 3mn8_A          294 YAFSNCFELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASGFPI  351 (435)
T ss_dssp             HHHSSCEEEEEECCSSSSCCGGGHHHHHHHHHHHHHHHHHGGGSSEEEEEECSSSCBC
T ss_pred             hhcCCceEEEEEeccccCCccccceeEEeechhhhccccccccceeEEEEECCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999988886
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Back     alignment and structure
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Back     alignment and structure
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Back     alignment and structure
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Back     alignment and structure
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1 Back     alignment and structure
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A* Back     alignment and structure
>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ... Back     alignment and structure
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A Back     alignment and structure
>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A Back     alignment and structure
>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ... Back     alignment and structure
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A* Back     alignment and structure
>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1 Back     alignment and structure
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A Back     alignment and structure
>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1 Back     alignment and structure
>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A Back     alignment and structure
>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A Back     alignment and structure
>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 Back     alignment and structure
>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A* Back     alignment and structure
>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis} Back     alignment and structure
>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 134
d1uwya2296 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic d 1e-29
d1h8la2301 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic d 6e-26
d1obra_323 c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyce 2e-11
d1m4la_307 c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) 8e-09
d2bo9a1305 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo 5e-08
d1ayea1307 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo 7e-08
d1z5ra1304 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus sc 9e-06
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 296 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 1e-29
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 6/95 (6%)

Query: 17  QYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFNYLSSNDF 76
           QYLA TYA  + +M   D      +         G+TNG  WY + GGMQD+NY+ +  F
Sbjct: 206 QYLAHTYASRNPNMKKGDECKNKMNF------PNGVTNGYSWYPLQGGMQDYNYIWAQCF 259

Query: 77  ELTLELGCVKFPPAELLPNEWERNKNALVEFMWKV 111
           E+TLEL C K+P  E LP+ W  NK +L+E++ +V
Sbjct: 260 EITLELSCCKYPREEKLPSFWNNNKASLIEYIKQV 294
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 301 Back     information, alignment and structure
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 323 Back     information, alignment and structure
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Length = 307 Back     information, alignment and structure
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 305 Back     information, alignment and structure
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 307 Back     information, alignment and structure
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]} Length = 304 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query134
d1uwya2296 Carboxypeptidase M, catalytic domain {Human (Homo 99.96
d1h8la2301 Carboxypeptidase D, catalytic domain {Crested duck 99.91
d1obra_323 Carboxypeptidase T {Thermoactinomyces vulgaris [Ta 99.69
d2bo9a1305 Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9 99.31
d1m4la_307 Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913] 99.19
d1ayea1307 Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9 99.16
d2c1ca1312 Carboxypeptidase B {Corn earworm (Helicoverpa zea) 98.73
d1z5ra1304 Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823] 98.66
d1jqga1317 Carboxypeptidase A {Cotton bollworm (Helicoverpa a 98.02
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=208.83  Aligned_cols=106  Identities=43%  Similarity=0.806  Sum_probs=94.4

Q ss_pred             ccccCCCCCCCC-----------hh-HHHHHHHHHHhCccccCCCCCCCCCCCCCCccCCCCceeceeeeeecCCccchh
Q psy16172          2 NIYSFDLGLIGP-----------LR-AQYLALTYAMNHADMGNPDREPCPYSGSPNFARQGGITNGAKWYVVTGGMQDFN   69 (134)
Q Consensus         2 anYPyD~~~~~~-----------~~-F~~LA~~Ya~~h~~M~~~~~~~C~~~~~~~F~~~~GItNGA~WY~v~GgMQD~n   69 (134)
                      +.|||+.+....           .. |+.||.+||..|+.|+.  +..|..  ...|  ..||+|||.||++.|+|+||.
T Consensus       179 i~yP~~~~~~~~~~~~~~~~~pd~~~~~~la~~~~~~~~~~~~--~~~~~~--~~~~--~~g~~~~~~~Y~~~G~~~Dw~  252 (296)
T d1uwya2         179 ASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYASRNPNMKK--GDECKN--KMNF--PNGVTNGYSWYPLQGGMQDYN  252 (296)
T ss_dssp             EEESCSSCCGGGTGGGTCCCCTTHHHHHHHHHHHHHTCTTTTT--SSCCSS--SCCC--STTEEESTTTCCCSSCHHHHH
T ss_pred             EecCCCCCcccccccccccCCCCHHHHHHHHHHHHHhchhhcc--CCCCCC--CCCC--CCCccccceEeecCCCccccc
Confidence            579999754321           12 99999999999999998  446642  4567  999999999999999999999


Q ss_pred             hhccceeeEEEeecccCCCCCCCcHHHHhhcHHHHHHHHHHhcc
Q psy16172         70 YLSSNDFELTLELGCVKFPPAELLPNEWERNKNALVEFMWKVSK  113 (134)
Q Consensus        70 Yl~tncfEiTlElsC~K~P~~~~L~~~W~~Nk~aLl~~~eqvH~  113 (134)
                      |.+.+|+++||||||||||++++|+.+|++||+|||+||+|||.
T Consensus       253 y~~~~~~~~T~El~~~~~P~~~~l~~~W~~n~~all~~l~~~h~  296 (296)
T d1uwya2         253 YIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVHL  296 (296)
T ss_dssp             HHTSCCBCCEEEEESSSSCCGGGHHHHHHTTHHHHHHHHGGGGC
T ss_pred             cccCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999995
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Back     information, alignment and structure
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Back     information, alignment and structure
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]} Back     information, alignment and structure
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]} Back     information, alignment and structure