Psyllid ID: psy16269

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MLALNSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSYLLG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccEEEcccccEEEEEEEccccccccEEEEEEccEEEEEEEEEEEcccccccccccccEEEEEcccccccccccccEEEEEccccEEEcccccccccccccccccEEcccccEEEEEEEEcccccccEEEEEEEccEEEEEEEcEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEccccccccccccHcccccccccccccccccccccEEEcccccEEEEEEEcccccccEEEEEEEcccEEEEEEEEEEEEEccccccccEEEEEEEEEEcccccccccccEEEcccccccccccccccccccccccccEEEcccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEccc
Coil and Loop (DISEMBL)
mlalnsssntvtsssndaltaaprpgpntyldnisspliqedgdnkLLKLRFdvsqyqpeeiVVKTVDNKLLVSTLTTktqircepiparrdrsqnrrqqtidgnigsssntvtsssndaltaaprpgpntyldnisspliqedgdnkLLKLRFdvsqyqpeeiVVKTVDNKLLVLSTYTNSYLLG
Flexible Loop (DISEMBL)
mlalnsssntvtsssndaltaaprPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSqyqpeeivvktvdnkllvstlttktqircepiparrdrsqnrrqqtidgnigsssntvtsssNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSqyqpeeivvktvdnkllvlstytnsyllg
Low Complexity Region (SEG)
MLALnsssntvtsssnDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGsssntvtsssnDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSYLLG
Disordered region (IsUnstruct)
********************************************NKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRC**************************************************************NKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSYL**
Disordered Region (DISOPRED)
*********************************ISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVST**************************************************************************LKLRFDVSQYQPEEIVVKTVDNKLLVLSTYT***LL*
Disordered Region (DISEMBL)
****************DALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPA*********QQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSYLLG
Disordered Region (DISPRO)
****************************TYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDG**************************TYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSYLLG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLALNSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSYLLG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
193618013	203	PREDICTED: alpha-crystallin B chain-like	0.376	0.344	0.630	4e-16
328699752	194	PREDICTED: alpha-crystallin B chain-like	0.376	0.360	0.630	5e-16
423292693	190	21.5 kDa heat shock protein [Lygus hespe	0.268	0.263	0.8	5e-16
315259614	181	heat shock protein [Musca domestica]	0.349	0.359	0.647	6e-16
449310893	189	heat shock protein 21.5 [Ericerus pela]	0.268	0.264	0.84	7e-16
322790176	161	hypothetical protein SINV_00296 [Solenop	0.483	0.559	0.494	4e-15
289740239	177	HspB1 [Glossina morsitans morsitans]	0.354	0.372	0.671	4e-15
242009914	166	heat shock protein, putative [Pediculus	0.327	0.367	0.639	2e-14
156545575	190	PREDICTED: heat shock protein beta-6-lik	0.268	0.263	0.76	2e-14
332376312	191	unknown [Dendroctonus ponderosae]	0.338	0.329	0.646	2e-14

>gi|193618013|ref|XP_001949446.1| PREDICTED: alpha-crystallin B chain-like isoform 2 [Acyrthosiphon pisum]

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 61/73 (83%), Gaps = 3/73 (4%)

Query: 109 SSNTVTSSSNDALTAAPRPG--PNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVV 166
           S NT++S+ +D L A+   G  P+ ++++I+SPLIQEDGDNK+LKLRFDVSQY+PEEIVV
Sbjct: 73  SQNTISSNHSD-LPASRLTGATPSGWVESINSPLIQEDGDNKMLKLRFDVSQYEPEEIVV 131

Query: 167 KTVDNKLLVLSTY 179
           KTVDNKLLV + +
Sbjct: 132 KTVDNKLLVHAKH 144

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699752|ref|XP_001949486.2| PREDICTED: alpha-crystallin B chain-like isoform 3 [Acyrthosiphon pisum]

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 61/73 (83%), Gaps = 3/73 (4%)

Query: 109 SSNTVTSSSNDALTAAPRPG--PNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVV 166
           S NT++S+ +D L A+   G  P+ ++++I+SPLIQEDGDNK+LKLRFDVSQY+PEEIVV
Sbjct: 64  SQNTISSNHSD-LPASRLTGATPSGWVESINSPLIQEDGDNKMLKLRFDVSQYEPEEIVV 122

Query: 167 KTVDNKLLVLSTY 179
           KTVDNKLLV + +
Sbjct: 123 KTVDNKLLVHAKH 135

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|423292693|gb|AFX84563.1| 21.5 kDa heat shock protein [Lygus hesperus]

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 48/50 (96%)

Query: 130 NTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTY 179
           NT+L+N++SPLIQE+GDNK+LKLRFDVSQYQPEEIVVKTVDNKLLV + +
Sbjct: 82  NTWLENLNSPLIQEEGDNKMLKLRFDVSQYQPEEIVVKTVDNKLLVHAKH 131

Source: Lygus hesperus

Species: Lygus hesperus

Genus: Lygus

Family: Miridae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|315259614|gb|ADT92004.1| heat shock protein [Musca domestica]

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 3/68 (4%)

Query: 112 TVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDN 171
           + + S+N AL+A P+     Y+ +ISSPLIQEDGDNK+LKLRFDVSQY PEEIVVKTVD 
Sbjct: 58  STSQSTNSALSARPK---QNYISDISSPLIQEDGDNKVLKLRFDVSQYAPEEIVVKTVDQ 114

Query: 172 KLLVLSTY 179
           KLLV + +
Sbjct: 115 KLLVHAKH 122

Source: Musca domestica

Species: Musca domestica

Genus: Musca

Family: Muscidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449310893|gb|AGE92593.1| heat shock protein 21.5 [Ericerus pela]

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/50 (84%), Positives = 46/50 (92%)

Query: 130 NTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTY 179
           NT+LDNI+SPLIQEDGD K LKLRFDVSQYQPEEIVVKTVDNKLLV + +
Sbjct: 81  NTWLDNINSPLIQEDGDGKSLKLRFDVSQYQPEEIVVKTVDNKLLVHAKH 130

Source: Ericerus pela

Species: Ericerus pela

Genus: Ericerus

Family: Coccidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790176|gb|EFZ15175.1| hypothetical protein SINV_00296 [Solenopsis invicta]

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 59/91 (64%)

Query: 89  ARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNK 148
           A R R    R  T+     S+ +T T  S    ++      + +LD ++SPLIQ++GDNK
Sbjct: 12  AHRHRKLYVRATTVGETFVSNCSTTTQQSTQNSSSLSPQHDHAWLDGLNSPLIQDEGDNK 71

Query: 149 LLKLRFDVSQYQPEEIVVKTVDNKLLVLSTY 179
           +LKLRFDVSQY PEEIVVKTVDNKLLV + +
Sbjct: 72  MLKLRFDVSQYTPEEIVVKTVDNKLLVHAKH 102

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289740239|gb|ADD18867.1| HspB1 [Glossina morsitans morsitans]

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 4/70 (5%)

Query: 4   LNSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIV 63
           +N  SN   S+S    T A RP  N Y+ +I+SPLIQEDGDNK+LKLRFDVSQY PEEIV
Sbjct: 49  MNRESNFFESTS---ATNASRPKQN-YISDINSPLIQEDGDNKVLKLRFDVSQYAPEEIV 104

Query: 64  VKTVDNKLLV 73
           VKTVD KLLV
Sbjct: 105 VKTVDQKLLV 114

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009914|ref|XP_002425727.1| heat shock protein, putative [Pediculus humanus corporis] gi|212509628|gb|EEB12989.1| heat shock protein, putative [Pediculus humanus corporis]

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 48/61 (78%)

Query: 28  NTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPI 87
           NT+ D ++SPLIQ+ GDNK+LKLRFDVSQYQPEEIVVKTVDNKLL + +     ++  P 
Sbjct: 65  NTWYDGLNSPLIQDQGDNKMLKLRFDVSQYQPEEIVVKTVDNKLLAAVVERTVSVKDFPK 124

Query: 88  P 88
           P
Sbjct: 125 P 125

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156545575|ref|XP_001607669.1| PREDICTED: heat shock protein beta-6-like isoform 1 [Nasonia vitripennis] gi|226442061|gb|ACO57620.1| small heat shock protein [Pteromalus puparum] gi|343488866|gb|AEM45800.1| small heat shock protein [Pteromalus puparum]

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/50 (76%), Positives = 46/50 (92%)

Query: 130 NTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTY 179
           NT+LD ++SPLIQ++GDNK+LKLRFDVSQY PEEIVVKTVDNKLLV + +
Sbjct: 82  NTWLDGLNSPLIQDEGDNKMLKLRFDVSQYTPEEIVVKTVDNKLLVHAKH 131

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332376312|gb|AEE63296.1| unknown [Dendroctonus ponderosae]

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 2/65 (3%)

Query: 117 SNDALTAAPRPGPN--TYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLL 174
            N  L  A RP  +  T+ D+++SPLIQEDG+NK LKLRFDVSQY PEEIVVKTVDNKLL
Sbjct: 69  HNSGLDVAQRPNNDVRTWYDDLNSPLIQEDGNNKCLKLRFDVSQYAPEEIVVKTVDNKLL 128

Query: 175 VLSTY 179
           V + +
Sbjct: 129 VHAKH 133

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
FB|FBgn0031037	192	CG14207 [Drosophila melanogast	0.456	0.442	0.470	4.2e-15
WB|WBGene00002023	219	hsp-25 [Caenorhabditis elegans	0.279	0.237	0.596	5.6e-13

FB|FBgn0031037 CG14207 [Drosophila melanogaster (taxid:7227)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 40/85 (47%), Positives = 49/85 (57%)

Query:    91 RDRSQNRRQQTIDGNIGXXXXXXXXXXXDALTAAPRPGPNTYLDNISSPLIQEDGDNKLL 150
             R    NR     +               ++   +  P    Y+ +ISSPLIQ++GDNK+L
Sbjct:    45 RHELMNREANFFESTSSTKKTTTTSSTTNSALPSRIPKQQNYVSDISSPLIQDEGDNKVL 104

Query:   151 KLRFDVSQYQPEEIVVKTVDNKLLV 175
             KLRFDVSQY PEEIVVKTVD KLLV
Sbjct:   105 KLRFDVSQYAPEEIVVKTVDQKLLV 129

GO:0030018 "Z disc" evidence=IDA

GO:0010998 "regulation of translational initiation by eIF2 alpha phosphorylation" evidence=IMP

GO:0010506 "regulation of autophagy" evidence=IMP

GO:0006497 "protein lipidation" evidence=IMP

WB|WBGene00002023 hsp-25 [Caenorhabditis elegans (taxid:6239)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 31/52 (59%), Positives = 42/52 (80%)

Query:    22 APRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 73
             A RP  + YLDN+ SPLI+++ D K L+LRFDV+ Y+PEE+ VKT+DN+LLV
Sbjct:   113 AHRPTYDPYLDNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLV 164

GO:0055120 "striated muscle dense body" evidence=IDA

GO:0031430 "M band" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	186
cd06526	83	cd06526, metazoan_ACD, Alpha-crystallin domain (AC	8e-08
cd06526	83	cd06526, metazoan_ACD, Alpha-crystallin domain (AC	2e-07

>gnl|CDD|107247 cd06526, metazoan_ACD, Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 39 IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVS 74
          +  D D K  ++  DV  ++PEE+ VK  DNKL+V 
Sbjct: 1  VVNDDDEKF-QVTLDVKGFKPEELKVKVSDNKLVVE 35

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 83

>gnl|CDD|107247 cd06526, metazoan_ACD, Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 141 IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 175
           +  D D K  ++  DV  ++PEE+ VK  DNKL+V
Sbjct: 1   VVNDDDEKF-QVTLDVKGFKPEELKVKVSDNKLVV 34

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 83

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
KOG3591|consensus	173		99.94
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.9
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.82
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.79
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	99.79
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.78
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	99.75
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.72
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	99.7
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.69
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	99.66
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	99.57
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	99.43
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.34
KOG3591|consensus	173		99.34
COG0071	146	IbpA Molecular chaperone (small heat shock protein	99.23
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	99.17
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	99.16
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	99.16
PRK10743	137	heat shock protein IbpA; Provisional	99.14
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.06
PRK11597	142	heat shock chaperone IbpB; Provisional	99.0
cd00298	80	ACD_sHsps_p23-like This domain family includes the	98.86
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	98.5
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	98.35
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	98.32
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	98.27
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	98.11
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	98.09
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	98.06
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	98.03
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	97.8
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	97.61
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	97.39
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	97.33
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	97.29
KOG0710|consensus	196		97.08
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	97.07
COG0071	146	IbpA Molecular chaperone (small heat shock protein	96.86
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	96.77
PRK10743	137	heat shock protein IbpA; Provisional	96.7
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	96.3
cd06463	84	p23_like Proteins containing this p23_like domain	96.21
cd00298	80	ACD_sHsps_p23-like This domain family includes the	96.0
PRK11597	142	heat shock chaperone IbpB; Provisional	95.85
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	94.71
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	94.35
CHL00140	178	rpl6 ribosomal protein L6; Validated	89.69
PRK05518	180	rpl6p 50S ribosomal protein L6P; Reviewed	89.22
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	89.07
PTZ00027	190	60S ribosomal protein L6; Provisional	88.84
PTZ00179	189	60S ribosomal protein L9; Provisional	87.42
TIGR03653	170	arch_L6P archaeal ribosomal protein L6P. Members o	87.35
TIGR03654	175	L6_bact ribosomal protein L6, bacterial type.	87.16
cd06489	84	p23_CS_hSgt1_like p23_like domain similar to the C	86.39
PRK05498	178	rplF 50S ribosomal protein L6; Validated	82.89

>KOG3591|consensus

Probab=99.94  E-value=3.6e-27  Score=193.95  Aligned_cols=84  Identities=27%  Similarity=0.271  Sum_probs=77.9

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEe
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTS  115 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstl  115 (186)
                      .....+.+++++|+|+|||++|+||||+||+.|+.|+|+|||++|+|++     |+++|+|+|+|.||++|||++|+|+|
T Consensus        62 ~~~~~~~~~~~~F~V~lDV~~F~PeEl~Vk~~~~~l~V~gkHeer~d~~-----G~v~R~F~R~y~LP~~vdp~~V~S~L  136 (173)
T KOG3591|consen   62 SGASEIVNDKDKFEVNLDVHQFKPEELKVKTDDNTLEVEGKHEEKEDEH-----GYVSRSFVRKYLLPEDVDPTSVTSTL  136 (173)
T ss_pred             ccccccccCCCcEEEEEEcccCcccceEEEeCCCEEEEEeeeccccCCC-----CeEEEEEEEEecCCCCCChhheEEee
Confidence            3456677899999999999999999999999999999999999998765     79999999999999999999999999


Q ss_pred             cCCCccccc
Q psy16269        116 SSNDALTAA  124 (186)
Q Consensus       116 s~~~~L~~a  124 (186)
                      |+||.||..
T Consensus       137 S~dGvLtI~  145 (173)
T KOG3591|consen  137 SSDGVLTIE  145 (173)
T ss_pred             CCCceEEEE
Confidence            999999554

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.90  E-value=1.4e-23  Score=156.74  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=71.0

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      .+++++|+|.|||++|+||||+|++.+++|+|+|+|++++++     +|+++|+|+|+|.||++||+++|+|+|+.||.|
T Consensus        11 ~~~~~~f~v~ldv~gF~pEDL~Vkv~~~~L~V~Gkh~~~~~e-----~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dGvL   85 (91)
T cd06480          11 PNSSEPWKVCVNVHSFKPEELTVKTKDGFVEVSGKHEEQQKE-----GGIVSKNFTKKIQLPPEVDPVTVFASLSPEGLL   85 (91)
T ss_pred             CCCCCcEEEEEEeCCCCHHHcEEEEECCEEEEEEEECcccCC-----CCEEEEEEEEEEECCCCCCchhEEEEeCCCCeE
Confidence            457899999999999999999999999999999999987653     369999999999999999999999999999999


Q ss_pred             c
Q psy16269        122 T  122 (186)
Q Consensus       122 ~  122 (186)
                      +
T Consensus        86 ~   86 (91)
T cd06480          86 I   86 (91)
T ss_pred             E
Confidence            4

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.82  E-value=7e-20  Score=134.11  Aligned_cols=78  Identities=22%  Similarity=0.256  Sum_probs=70.7

Q ss_pred             eeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCc
Q psy16269         41 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDA  120 (186)
Q Consensus        41 ~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~  120 (186)
                      ..+++++|+|.+|+.+|+||+|+|++.+|.|+|+|+|+++.++     .++++|+|+|+|.||++||++.|+|+++.||.
T Consensus         2 ~~~~~d~y~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dGv   76 (83)
T cd06476           2 VESEDDKYQVFLDVCHFTPDEITVRTVDNLLEVSARHPQRMDR-----HGFVSREFTRTYILPMDVDPLLVRASLSHDGI   76 (83)
T ss_pred             eeccCCeEEEEEEcCCCCHHHeEEEEECCEEEEEEEEcceecC-----CCEEEEEEEEEEECCCCCChhhEEEEecCCCE
Confidence            3468999999999999999999999999999999999766532     46999999999999999999999999999999


Q ss_pred             ccc
Q psy16269        121 LTA  123 (186)
Q Consensus       121 L~~  123 (186)
                      |+.
T Consensus        77 L~I   79 (83)
T cd06476          77 LCI   79 (83)
T ss_pred             EEE
Confidence            943

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.79  E-value=5.3e-19  Score=129.50  Aligned_cols=77  Identities=18%  Similarity=0.230  Sum_probs=70.2

Q ss_pred             eeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCc
Q psy16269         41 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDA  120 (186)
Q Consensus        41 ~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~  120 (186)
                      +..+++.|.|.+|+.+|+||||+|++.+|.|+|+|+|+++.++     .++.+|+|+|+|.||++||++.|+|+++.||.
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dGv   76 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKVLGDFIEIHGKHEERQDE-----HGFISREFQRKYRIPADVDPLTITSSLSPDGV   76 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEEECCEEEEEEEEcceeCC-----CCEEEEEEEEEEECCCCCChHHcEEEeCCCCE
Confidence            3457999999999999999999999999999999999876542     46899999999999999999999999999999


Q ss_pred             cc
Q psy16269        121 LT  122 (186)
Q Consensus       121 L~  122 (186)
                      |+
T Consensus        77 L~   78 (84)
T cd06498          77 LT   78 (84)
T ss_pred             EE
Confidence            94

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=99.79  E-value=6.4e-19  Score=129.49  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=71.5

Q ss_pred             EeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCC
Q psy16269         40 QEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSND  119 (186)
Q Consensus        40 ~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~  119 (186)
                      .+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+|++++++     +++..|+|+|+|.||++||+++|+|+|+.||
T Consensus         4 ~v~e~~~~~~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dG   78 (86)
T cd06497           4 EVRSDRDKFTIYLDVKHFSPEDLTVKVLDDYVEIHGKHSERQDD-----HGYISREFHRRYRLPSNVDQSAITCSLSADG   78 (86)
T ss_pred             eEEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcceeCC-----CCEEEEEEEEEEECCCCCChHHeEEEeCCCC
Confidence            45568999999999999999999999999999999999766532     4799999999999999999999999999999


Q ss_pred             cccc
Q psy16269        120 ALTA  123 (186)
Q Consensus       120 ~L~~  123 (186)
                      .|+.
T Consensus        79 vL~I   82 (86)
T cd06497          79 MLTF   82 (86)
T ss_pred             EEEE
Confidence            9943

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.78  E-value=9.8e-19  Score=127.48  Aligned_cols=77  Identities=18%  Similarity=0.232  Sum_probs=70.0

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      ..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+|+++.++     +++++|+|.|+|.||.+||++.|+|+++.||.|
T Consensus         3 ~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~-----~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dGvL   77 (83)
T cd06478           3 RLDKDRFSVNLDVKHFSPEELSVKVLGDFVEIHGKHEERQDE-----HGFISREFHRRYRLPPGVDPAAITSSLSADGVL   77 (83)
T ss_pred             eecCceEEEEEECCCCCHHHeEEEEECCEEEEEEEEceEcCC-----CCEEEEEEEEEEECCCCcChHHeEEEECCCCEE
Confidence            457899999999999999999999999999999998765432     468999999999999999999999999999999


Q ss_pred             cc
Q psy16269        122 TA  123 (186)
Q Consensus       122 ~~  123 (186)
                      +.
T Consensus        78 ~I   79 (83)
T cd06478          78 TI   79 (83)
T ss_pred             EE
Confidence            43

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=99.75  E-value=5.4e-18  Score=124.49  Aligned_cols=76  Identities=14%  Similarity=0.237  Sum_probs=69.3

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      +.++++|.|.+|+.+|+||+|+|++.++.|+|+|+|+.+.++     ++++.|+|+|+|.||++||++.|+|++..||.|
T Consensus         3 ~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~ge~~~~~~~-----~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dGvL   77 (83)
T cd06477           3 EEGKPMFQILLDVVQFRPEDIIIQVFEGWLLIKGQHGVRMDE-----HGFISRSFTRQYQLPDGVEHKDLSAMLCHDGIL   77 (83)
T ss_pred             ccCCceEEEEEEcCCCCHHHeEEEEECCEEEEEEEEccccCC-----CCEEEEEEEEEEECCCCcchheEEEEEcCCCEE
Confidence            357899999999999999999999999999999999875432     468899999999999999999999999999999


Q ss_pred             c
Q psy16269        122 T  122 (186)
Q Consensus       122 ~  122 (186)
                      +
T Consensus        78 ~   78 (83)
T cd06477          78 V   78 (83)
T ss_pred             E
Confidence            4

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.72  E-value=2.5e-17  Score=121.27  Aligned_cols=81  Identities=17%  Similarity=0.242  Sum_probs=69.7

Q ss_pred             eeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCc
Q psy16269         41 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDA  120 (186)
Q Consensus        41 ~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~  120 (186)
                      +++++++|.|.+|+.+|+||+|+|++.+|.|+|+|+|+...++.. ....+.+++|+|+|.||++||+++|+|+++.||.
T Consensus         2 ~~~~~d~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~-~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dGv   80 (87)
T cd06481           2 GKDGKEGFSLKLDVRGFSPEDLSVRVDGRKLVVTGKREKKNEDEK-GSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSGH   80 (87)
T ss_pred             CCCccceEEEEEECCCCChHHeEEEEECCEEEEEEEEeeecccCC-CcEEEEeeEEEEEEECCCCcChHHeEEEeCCCce
Confidence            457899999999999999999999999999999999976543321 1123567999999999999999999999999999


Q ss_pred             cc
Q psy16269        121 LT  122 (186)
Q Consensus       121 L~  122 (186)
                      |+
T Consensus        81 L~   82 (87)
T cd06481          81 LH   82 (87)
T ss_pred             EE
Confidence            94

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=99.70  E-value=7.1e-17  Score=118.61  Aligned_cols=78  Identities=23%  Similarity=0.253  Sum_probs=70.4

Q ss_pred             EeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCC
Q psy16269         40 QEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSND  119 (186)
Q Consensus        40 ~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~  119 (186)
                      .+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+|+++.++     +++..|+|.|+|.||++||+++|+|++..||
T Consensus         4 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dG   78 (86)
T cd06475           4 EIRQTADRWKVSLDVNHFAPEELVVKTKDGVVEITGKHEEKQDE-----HGFVSRCFTRKYTLPPGVDPTAVTSSLSPDG   78 (86)
T ss_pred             eEEEcCCeEEEEEECCCCCHHHEEEEEECCEEEEEEEECcCcCC-----CCEEEEEEEEEEECCCCCCHHHcEEEECCCC
Confidence            34558999999999999999999999999999999999865543     3688999999999999999999999999999


Q ss_pred             ccc
Q psy16269        120 ALT  122 (186)
Q Consensus       120 ~L~  122 (186)
                      .|+
T Consensus        79 vL~   81 (86)
T cd06475          79 ILT   81 (86)
T ss_pred             eEE
Confidence            994

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.69  E-value=1.1e-16  Score=116.96  Aligned_cols=74  Identities=18%  Similarity=0.241  Sum_probs=65.6

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      ..++++|.|.+|+.+|+||+|+|++.+|.|.|+|+++.   +.     +..+++|+|+|.||++||++.|+|+|+.||.|
T Consensus         4 ~e~~~~~~v~~dlpG~~pedi~V~v~~~~L~I~ger~~---~~-----~~~~g~F~R~~~LP~~vd~e~v~A~l~~~GvL   75 (81)
T cd06479           4 KTLGDTYQFAVDVSDFSPEDIIVTTSNNQIEVHAEKLA---SD-----GTVMNTFTHKCQLPEDVDPTSVSSSLGEDGTL   75 (81)
T ss_pred             cCcCCeEEEEEECCCCCHHHeEEEEECCEEEEEEEEec---cC-----CCEEEEEEEEEECCCCcCHHHeEEEecCCCEE
Confidence            45789999999999999999999999999999998642   11     24689999999999999999999999999999


Q ss_pred             cc
Q psy16269        122 TA  123 (186)
Q Consensus       122 ~~  123 (186)
                      +.
T Consensus        76 ~I   77 (81)
T cd06479          76 TI   77 (81)
T ss_pred             EE
Confidence            43

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.66  E-value=5.7e-16  Score=111.94  Aligned_cols=75  Identities=27%  Similarity=0.355  Sum_probs=67.5

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcccc
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTA  123 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~~  123 (186)
                      +.+.|.|.+|+.+|+||+|+|++.++.|.|+|+++...+     .+++.+++|+|+|.||++||+++++|+++++|.|+.
T Consensus         5 ~~~~~~v~~dlpG~~~edI~v~v~~~~L~I~g~~~~~~~-----~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I   79 (83)
T cd06526           5 DDEKFQVTLDVKGFKPEELKVKVSDNKLVVEGKHEERED-----EHGYVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTI   79 (83)
T ss_pred             cCeeEEEEEECCCCCHHHcEEEEECCEEEEEEEEeeecc-----CCCEEEEEEEEEEECCCCCChHHeEEEeCCCcEEEE
Confidence            346999999999999999999999999999999886543     246889999999999999999999999999999943

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=99.57  E-value=1.2e-14  Score=107.71  Aligned_cols=77  Identities=14%  Similarity=0.165  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCccc
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALT  122 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~  122 (186)
                      +++.|.|.+|+.+|+||+|+|++.++.|+|+|++++..++.+  ...+.+.+|.|+|.||.+||++.|+|++.++|.|+
T Consensus         6 ~~~~~~v~adlPG~~kedI~V~v~~~~L~I~ger~~~~e~~~--~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~   82 (87)
T cd06482           6 DSSNVLASVDVCGFEPDQVKVKVKDGKVQVSAERENRYDCLG--SKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSVVK   82 (87)
T ss_pred             cCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEecccccCC--ccEEEEEEEEEEEECCCCcChHHcEEEEcCCCEEE
Confidence            789999999999999999999999999999999876543222  22478899999999999999999999999999984

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=99.43  E-value=4.2e-13  Score=98.95  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=59.4

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCcee----eeeEEEEEecCCCCCCCCceEEecC
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRD----RSQNRRQQTIDGNIGSSSNTVTSSS  117 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~v----sReF~R~y~LP~~VD~~~vtstls~  117 (186)
                      ..+++.|.|.+|+.+|.||+|+|++.++.|.|.|++.....+.    .++.    .+.|.|+|.||++||++.++|++ .
T Consensus         3 ~e~~~~~~i~~~lpG~~~edi~I~~~~~~L~I~g~~~~~~~~~----~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~-~   77 (102)
T PF00011_consen    3 KEDEDEYIIKVDLPGFDKEDIKIKVDDNKLVISGKRKEEEEDD----RYYRSERRYGSFERSIRLPEDVDPDKIKASY-E   77 (102)
T ss_dssp             EESSSEEEEEEE-TTS-GGGEEEEEETTEEEEEEEEEGEECTT----CEEEE-S-SEEEEEEEE-STTB-GGG-EEEE-T
T ss_pred             EECCCEEEEEEECCCCChHHEEEEEecCccceeceeeeeeeee----eeeecccccceEEEEEcCCCcCCcceEEEEe-c
Confidence            4578999999999999999999999999999999999222211    1222    37999999999999999999999 8


Q ss_pred             CCccc
Q psy16269        118 NDALT  122 (186)
Q Consensus       118 ~~~L~  122 (186)
                      ||.|+
T Consensus        78 ~GvL~   82 (102)
T PF00011_consen   78 NGVLT   82 (102)
T ss_dssp             TSEEE
T ss_pred             CCEEE
Confidence            99993

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.34  E-value=2.9e-12  Score=90.45  Aligned_cols=78  Identities=15%  Similarity=0.194  Sum_probs=65.8

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCC-CCCCceeeeeEEEEEecCCCCCCCCceEEecCCCccc
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCE-PIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALT  122 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~-~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~  122 (186)
                      +++.|.+.+|+.+|.|++|+|++.++.|.|+|++........ ....++..++|.|+|.||.++|++.++|++.+ |.|+
T Consensus         5 ~~~~~~i~~~lpg~~~~~i~V~v~~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~-G~L~   83 (88)
T cd06464           5 TDDAYVVEADLPGFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLEN-GVLT   83 (88)
T ss_pred             cCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeC-CEEE
Confidence            568999999999999999999999999999999986433210 01134678999999999999999999999997 8883

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>KOG3591|consensus

Probab=99.34  E-value=1.2e-12  Score=107.93  Aligned_cols=46  Identities=33%  Similarity=0.374  Sum_probs=42.9

Q ss_pred             CCceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccccc
Q psy16269        138 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSY  183 (186)
Q Consensus       138 ~p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~~  183 (186)
                      .+.+++.+++++|+|+|||++|+||||+||+.|+.|+|+||||+|+
T Consensus        62 ~~~~~~~~~~~~F~V~lDV~~F~PeEl~Vk~~~~~l~V~gkHeer~  107 (173)
T KOG3591|consen   62 SGASEIVNDKDKFEVNLDVHQFKPEELKVKTDDNTLEVEGKHEEKE  107 (173)
T ss_pred             ccccccccCCCcEEEEEEcccCcccceEEEeCCCEEEEEeeecccc
Confidence            4566788899999999999999999999999999999999999995

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.23  E-value=4.7e-11  Score=94.72  Aligned_cols=89  Identities=11%  Similarity=0.152  Sum_probs=72.5

Q ss_pred             CCCCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeee--ecccCCCCCCceeeeeEEEEEecCCCCCCCCc
Q psy16269         34 ISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTK--TQIRCEPIPARRDRSQNRRQQTIDGNIGSSSN  111 (186)
Q Consensus        34 ~~~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHee--k~d~~~~~~~g~vsReF~R~y~LP~~VD~~~v  111 (186)
                      ..+|.+.+...++.|.|.+||.+|++++|.|.+.++.|+|.|+++.  +.+..+....++.++.|.|+|.||..||++.+
T Consensus        38 ~~~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~~  117 (146)
T COG0071          38 TGTPPVDIEETDDEYRITAELPGVDKEDIEITVEGNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEVI  117 (146)
T ss_pred             CCCCcEEEEEcCCEEEEEEEcCCCChHHeEEEEECCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccce
Confidence            3467787777888999999999999999999999999999999975  22222112234568999999999999999999


Q ss_pred             eEEecCCCcccc
Q psy16269        112 TVTSSSNDALTA  123 (186)
Q Consensus       112 tstls~~~~L~~  123 (186)
                      +|++. ||.|+.
T Consensus       118 ~A~~~-nGvL~I  128 (146)
T COG0071         118 KAKYK-NGLLTV  128 (146)
T ss_pred             eeEee-CcEEEE
Confidence            99998 688843

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=99.17  E-value=1.2e-10  Score=85.57  Aligned_cols=77  Identities=10%  Similarity=0.183  Sum_probs=59.0

Q ss_pred             CCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCC-CCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         43 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEP-IPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        43 ~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~-~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      .+++.|.|.+++.+|+||+|+|.+.++.|+|.|+++....+.+. ...++.+.+|.|+|.||.+||..  +|++. ||.|
T Consensus         8 ~~~~~~~v~~~lPG~~kedi~v~~~~~~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A~~~-~GvL   84 (90)
T cd06470           8 TGENNYRITLAVAGFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GAELE-NGLL   84 (90)
T ss_pred             cCCCeEEEEEECCCCCHHHeEEEEECCEEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--eeEEe-CCEE
Confidence            34689999999999999999999999999999998765432100 00012367899999999999974  66655 6777


Q ss_pred             c
Q psy16269        122 T  122 (186)
Q Consensus       122 ~  122 (186)
                      +
T Consensus        85 ~   85 (90)
T cd06470          85 T   85 (90)
T ss_pred             E
Confidence            3

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=99.16  E-value=9.2e-11  Score=86.07  Aligned_cols=81  Identities=17%  Similarity=0.124  Sum_probs=62.6

Q ss_pred             eeCCCCeEEEEEeCCCcCCCceEEEEECC-EEEEEEEeeeecccCCCC--CCceeeeeEEEEEecCCCCCCCCceEEecC
Q psy16269         41 EDGDNKLLKLRFDVSQYQPEEIVVKTVDN-KLLVSTLTTKTQIRCEPI--PARRDRSQNRRQQTIDGNIGSSSNTVTSSS  117 (186)
Q Consensus        41 ~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~-~L~V~gkHeek~d~~~~~--~~g~vsReF~R~y~LP~~VD~~~vtstls~  117 (186)
                      +..+++.|.|.+|+.+|+||+|+|.+.++ .|+|+|+........+..  ...+.+.+|.|+|.||.+||++.++|++. 
T Consensus         4 v~E~~~~~~i~~~lPGv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A~~~-   82 (92)
T cd06472           4 WKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKAFLE-   82 (92)
T ss_pred             EEEcCCeEEEEEECCCCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEEEEE-
Confidence            34578999999999999999999999974 899999864321111100  00123679999999999999999999997 


Q ss_pred             CCccc
Q psy16269        118 NDALT  122 (186)
Q Consensus       118 ~~~L~  122 (186)
                      ||.|+
T Consensus        83 nGvL~   87 (92)
T cd06472          83 NGVLT   87 (92)
T ss_pred             CCEEE
Confidence            68884

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=99.16  E-value=2.4e-10  Score=83.57  Aligned_cols=82  Identities=12%  Similarity=0.105  Sum_probs=64.9

Q ss_pred             eEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCcee-----eeeEEEEEecCCCCCCCCceE
Q psy16269         39 IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRD-----RSQNRRQQTIDGNIGSSSNTV  113 (186)
Q Consensus        39 i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~v-----sReF~R~y~LP~~VD~~~vts  113 (186)
                      +.+..+++.|.|.+|+.+|+|++|+|.+.++.|+|.|+++...++.. ..+.+.     +..|.|.|.|| +||++.++|
T Consensus         3 ~di~e~~~~~~i~~~lPGv~~edi~v~~~~~~L~I~g~~~~~~~~~~-~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i~A   80 (93)
T cd06471           3 TDIKETDDEYIVEADLPGFKKEDIKLDYKDGYLTISAKRDESKDEKD-KKGNYIRRERYYGSFSRSFYLP-NVDEEEIKA   80 (93)
T ss_pred             eeEEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcccccccc-ccCCEEEEeeeccEEEEEEECC-CCCHHHCEE
Confidence            34556899999999999999999999999999999999875332211 112233     34699999999 799999999


Q ss_pred             EecCCCcccc
Q psy16269        114 TSSSNDALTA  123 (186)
Q Consensus       114 tls~~~~L~~  123 (186)
                      ++ .||.|+.
T Consensus        81 ~~-~dGvL~I   89 (93)
T cd06471          81 KY-ENGVLKI   89 (93)
T ss_pred             EE-ECCEEEE
Confidence            99 6898843

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>PRK10743 heat shock protein IbpA; Provisional

Probab=99.14  E-value=1.9e-10  Score=91.59  Aligned_cols=84  Identities=17%  Similarity=0.176  Sum_probs=63.5

Q ss_pred             CceEee-CCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEe
Q psy16269         37 PLIQED-GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTS  115 (186)
Q Consensus        37 p~i~~~-~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstl  115 (186)
                      |-+.+. .+++.|.|.+|+.+|+|++|.|.+.++.|+|+|++.+..++.+.....+.+++|.|+|.||++||.+.  |++
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~~--A~~  112 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRG--ANL  112 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccCc--CEE
Confidence            555555 47899999999999999999999999999999997654321110000123468999999999999994  666


Q ss_pred             cCCCcccc
Q psy16269        116 SSNDALTA  123 (186)
Q Consensus       116 s~~~~L~~  123 (186)
                      . ||.|+.
T Consensus       113 ~-dGVL~I  119 (137)
T PRK10743        113 V-NGLLYI  119 (137)
T ss_pred             e-CCEEEE
Confidence            5 788833

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.06  E-value=1.6e-10  Score=86.46  Aligned_cols=40  Identities=25%  Similarity=0.327  Sum_probs=37.4

Q ss_pred             ecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccccc
Q psy16269        144 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSY  183 (186)
Q Consensus       144 ~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~~  183 (186)
                      .+.+++|+|.|||++|+||||+||+.+|+|+|+|+|+++.
T Consensus        11 ~~~~~~f~v~ldv~gF~pEDL~Vkv~~~~L~V~Gkh~~~~   50 (91)
T cd06480          11 PNSSEPWKVCVNVHSFKPEELTVKTKDGFVEVSGKHEEQQ   50 (91)
T ss_pred             CCCCCcEEEEEEeCCCCHHHcEEEEECCEEEEEEEECccc
Confidence            4578999999999999999999999999999999999874

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=99.00  E-value=1.4e-09  Score=87.19  Aligned_cols=78  Identities=14%  Similarity=0.217  Sum_probs=61.4

Q ss_pred             CceEeeC-CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceee-----eeEEEEEecCCCCCCCC
Q psy16269         37 PLIQEDG-DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDR-----SQNRRQQTIDGNIGSSS  110 (186)
Q Consensus        37 p~i~~~~-~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vs-----ReF~R~y~LP~~VD~~~  110 (186)
                      |.+.+.. +++.|.|.+|+.+|++++|.|.+.+|.|+|.|+..... +    ++.++.     ..|.|+|.||++||.+ 
T Consensus        33 P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~~~~LtI~ge~~~~~-~----~~~~~~~Er~~g~F~R~f~LP~~vd~~-  106 (142)
T PRK11597         33 PPYNIEKSDDNHYRITLALAGFRQEDLDIQLEGTRLTVKGTPEQPE-K----EVKWLHQGLVNQPFSLSFTLAENMEVS-  106 (142)
T ss_pred             CcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEECCEEEEEEEEcccc-C----CCcEEEEEEeCcEEEEEEECCCCcccC-
Confidence            6555554 57799999999999999999999999999999854321 1    123443     4699999999999998 


Q ss_pred             ceEEecCCCccc
Q psy16269        111 NTVTSSSNDALT  122 (186)
Q Consensus       111 vtstls~~~~L~  122 (186)
                       .|++. ||.|+
T Consensus       107 -~A~~~-nGVL~  116 (142)
T PRK11597        107 -GATFV-NGLLH  116 (142)
T ss_pred             -cCEEc-CCEEE
Confidence             57775 78883

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=98.86  E-value=1.5e-08  Score=68.28  Aligned_cols=71  Identities=15%  Similarity=0.228  Sum_probs=62.7

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      ..+.|.|.+++.+|.|++|.|++.++.|.|+|++.....      ++...++|.+++.||..||++.+++++.. |.|
T Consensus         4 ~~~~v~i~i~~~~~~~~~i~v~~~~~~l~v~~~~~~~~~------~~~~~~~~~~~~~L~~~i~~~~~~~~~~~-~~l   74 (80)
T cd00298           4 TDDEVVVTVDLPGVKKEDIKVEVEDNVLTISGKREEEEE------RERSYGEFERSFELPEDVDPEKSKASLEN-GVL   74 (80)
T ss_pred             cCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcCCCc------ceEeeeeEEEEEECCCCcCHHHCEEEEEC-CEE
Confidence            458999999999999999999999999999999885433      34678999999999999999999999996 655

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=98.50  E-value=1.7e-07  Score=68.64  Aligned_cols=41  Identities=29%  Similarity=0.481  Sum_probs=37.3

Q ss_pred             eecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccccc
Q psy16269        143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNSY  183 (186)
Q Consensus       143 ~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~~  183 (186)
                      +..++++|.|.+|+..|+||+|+|++.+|.|+|+|+|++++
T Consensus         2 ~~~~~d~y~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~   42 (83)
T cd06476           2 VESEDDKYQVFLDVCHFTPDEITVRTVDNLLEVSARHPQRM   42 (83)
T ss_pred             eeccCCeEEEEEEcCCCCHHHeEEEEECCEEEEEEEEccee
Confidence            35688999999999999999999999999999999997653

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=98.35  E-value=7.4e-07  Score=65.42  Aligned_cols=42  Identities=19%  Similarity=0.413  Sum_probs=38.7

Q ss_pred             eeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        141 IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       141 i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      +++..+++.|.|.+|+..|+||+|.|++.+|.|+|+|+|+++
T Consensus         3 ~~v~e~~~~~~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~   44 (86)
T cd06497           3 SEVRSDRDKFTIYLDVKHFSPEDLTVKVLDDYVEIHGKHSER   44 (86)
T ss_pred             ceEEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcce
Confidence            456779999999999999999999999999999999999764

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=98.32  E-value=8.4e-07  Score=64.92  Aligned_cols=40  Identities=18%  Similarity=0.331  Sum_probs=37.0

Q ss_pred             eecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       143 ~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      +..+++.|.|.+|+..|+||+|+|++.+|.|+|+|+|+++
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~   41 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKVLGDFIEIHGKHEER   41 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEEECCEEEEEEEEcce
Confidence            4568899999999999999999999999999999999764

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=98.27  E-value=1.4e-06  Score=63.42  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=36.6

Q ss_pred             eecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       143 ~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      +..+++.|.|.+|+..|+||+|+|++.+|.|+|+|+|+++
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~   41 (83)
T cd06478           2 VRLDKDRFSVNLDVKHFSPEELSVKVLGDFVEIHGKHEER   41 (83)
T ss_pred             eeecCceEEEEEECCCCCHHHeEEEEECCEEEEEEEEceE
Confidence            4568899999999999999999999999999999998753

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=98.11  E-value=4.3e-06  Score=61.44  Aligned_cols=37  Identities=24%  Similarity=0.457  Sum_probs=34.6

Q ss_pred             cCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        145 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       145 ~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      +++++|.|.+|+..|+|++|+|++.+|.|+|+|+|+.
T Consensus         4 ~~~d~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~   40 (87)
T cd06481           4 DGKEGFSLKLDVRGFSPEDLSVRVDGRKLVVTGKREK   40 (87)
T ss_pred             CccceEEEEEECCCCChHHeEEEEECCEEEEEEEEee
Confidence            5679999999999999999999999999999999864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=98.09  E-value=5.2e-06  Score=60.65  Aligned_cols=39  Identities=26%  Similarity=0.385  Sum_probs=35.4

Q ss_pred             eecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       143 ~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      +..+++.|.|.+|+..|+||+|+|++.+|.|.|+|.++.
T Consensus         3 v~e~~~~~~v~~dlpG~~pedi~V~v~~~~L~I~ger~~   41 (81)
T cd06479           3 VKTLGDTYQFAVDVSDFSPEDIIVTTSNNQIEVHAEKLA   41 (81)
T ss_pred             ccCcCCeEEEEEECCCCCHHHeEEEEECCEEEEEEEEec
Confidence            346789999999999999999999999999999998753

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=98.06  E-value=6e-06  Score=60.64  Aligned_cols=38  Identities=21%  Similarity=0.473  Sum_probs=35.2

Q ss_pred             cCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        145 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       145 ~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      .++++|.|.+|+..|+||+|+|++.++.|+|+|+|+.+
T Consensus         4 e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~ge~~~~   41 (83)
T cd06477           4 EGKPMFQILLDVVQFRPEDIIIQVFEGWLLIKGQHGVR   41 (83)
T ss_pred             cCCceEEEEEEcCCCCHHHeEEEEECCEEEEEEEEccc
Confidence            46799999999999999999999999999999998653

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=98.03  E-value=9.5e-06  Score=59.53  Aligned_cols=41  Identities=27%  Similarity=0.397  Sum_probs=37.6

Q ss_pred             eeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        142 QEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       142 ~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      ++..+++.|.|.+|+..|+||+|.|++.++.|+|+|+|+++
T Consensus         4 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~   44 (86)
T cd06475           4 EIRQTADRWKVSLDVNHFAPEELVVKTKDGVVEITGKHEEK   44 (86)
T ss_pred             eEEEcCCeEEEEEECCCCCHHHEEEEEECCEEEEEEEECcC
Confidence            45678899999999999999999999999999999999764

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=97.80  E-value=2.9e-05  Score=55.83  Aligned_cols=37  Identities=35%  Similarity=0.590  Sum_probs=34.0

Q ss_pred             CCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        146 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       146 ~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      +.+.|.|.+|+..|+|++|+|++.++.|+|+|+++..
T Consensus         5 ~~~~~~v~~dlpG~~~edI~v~v~~~~L~I~g~~~~~   41 (83)
T cd06526           5 DDEKFQVTLDVKGFKPEELKVKVSDNKLVVEGKHEER   41 (83)
T ss_pred             cCeeEEEEEECCCCCHHHcEEEEECCEEEEEEEEeee
Confidence            3479999999999999999999999999999998764

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=97.61  E-value=9.5e-05  Score=54.77  Aligned_cols=37  Identities=27%  Similarity=0.399  Sum_probs=34.8

Q ss_pred             cCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        145 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       145 ~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      -+++.|.|.+|+..|+|++|.|++.+|.|+|+|++++
T Consensus         5 ~~~~~~~v~adlPG~~kedI~V~v~~~~L~I~ger~~   41 (87)
T cd06482           5 CDSSNVLASVDVCGFEPDQVKVKVKDGKVQVSAEREN   41 (87)
T ss_pred             ccCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEec
Confidence            4789999999999999999999999999999999864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=97.39  E-value=0.00029  Score=49.34  Aligned_cols=38  Identities=16%  Similarity=0.253  Sum_probs=34.9

Q ss_pred             cCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        145 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       145 ~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      .+++.|.+.+|+..|.|++|+|++.++.|.|+|++...
T Consensus         4 e~~~~~~i~~~lpg~~~~~i~V~v~~~~l~I~g~~~~~   41 (88)
T cd06464           4 ETDDAYVVEADLPGFKKEDIKVEVEDGVLTISGEREEE   41 (88)
T ss_pred             EcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEecc
Confidence            35689999999999999999999999999999999854

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=97.33  E-value=0.00048  Score=50.47  Aligned_cols=38  Identities=24%  Similarity=0.391  Sum_probs=33.7

Q ss_pred             eecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecc
Q psy16269        143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYT  180 (186)
Q Consensus       143 ~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHe  180 (186)
                      +..+++.|.|.+|+..|.|++|+|++.++.|+|+|++.
T Consensus         2 i~e~~~~~~i~~~lpG~~~edi~I~~~~~~L~I~g~~~   39 (102)
T PF00011_consen    2 IKEDEDEYIIKVDLPGFDKEDIKIKVDDNKLVISGKRK   39 (102)
T ss_dssp             EEESSSEEEEEEE-TTS-GGGEEEEEETTEEEEEEEEE
T ss_pred             eEECCCEEEEEEECCCCChHHEEEEEecCccceeceee
Confidence            35688999999999999999999999999999999998

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=97.29  E-value=0.00053  Score=50.22  Aligned_cols=42  Identities=10%  Similarity=0.283  Sum_probs=36.2

Q ss_pred             eeeec-CCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        141 IQEDG-DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       141 i~~~~-~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      +.+.. +++.|.|.+++-.|+||+|.|.+.++.|+|.|+++..
T Consensus         3 ~di~e~~~~~~~v~~~lPG~~kedi~v~~~~~~L~I~g~~~~~   45 (90)
T cd06470           3 YNIEKTGENNYRITLAVAGFSEDDLEIEVENNQLTVTGKKADE   45 (90)
T ss_pred             eeeEEcCCCeEEEEEECCCCCHHHeEEEEECCEEEEEEEEccc
Confidence            34444 4589999999999999999999999999999987654

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>KOG0710|consensus

Probab=97.08  E-value=0.0011  Score=55.49  Aligned_cols=79  Identities=16%  Similarity=0.198  Sum_probs=62.6

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECC-EEEEEEEeeeecccCCCCC----CceeeeeEEEEEecCCCCCCCCceEEec
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDN-KLLVSTLTTKTQIRCEPIP----ARRDRSQNRRQQTIDGNIGSSSNTVTSS  116 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~-~L~V~gkHeek~d~~~~~~----~g~vsReF~R~y~LP~~VD~~~vtstls  116 (186)
                      ....+.|.+.+|+.+-+-++|+|.+.++ .|.|.|++....++.+...    .......|.|++.||++++.+.+.+.+.
T Consensus        90 ~e~~~~~~~~~~~Pgl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~~~~~~~~E~~~g~F~r~~~lPenv~~d~ikA~~~  169 (196)
T KOG0710|consen   90 KESPDAHEFKVDLPGLKKEDIKVEVEDEKVLTISGERKKEEEESGSGKKWKRVERKLGKFKRRFELPENVDVDEIKAEME  169 (196)
T ss_pred             ccCCCceEEEeeCCCCCchhceEEeccCcEEEEecccccccccccCCccceeehhcccceEeeecCCccccHHHHHHHhh
Confidence            4478899999999999999999999998 5999999876554321100    0123458999999999999999999887


Q ss_pred             CCCcc
Q psy16269        117 SNDAL  121 (186)
Q Consensus       117 ~~~~L  121 (186)
                       ||.|
T Consensus       170 -nGVL  173 (196)
T KOG0710|consen  170 -NGVL  173 (196)
T ss_pred             -CCeE
Confidence             5777

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=97.07  E-value=0.0031  Score=43.99  Aligned_cols=59  Identities=10%  Similarity=0.104  Sum_probs=50.9

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      +.+...|++++.+-+++++.|...++.|.|.|                  ..|.+.+.||..||++..++++.+ |.|
T Consensus         4 t~~~v~i~i~~p~v~~~~v~v~~~~~~l~i~~------------------~~~~~~~~l~~~I~~e~~~~~~~~-~~l   62 (78)
T cd06469           4 TDEDVKISVPLKGVKTSKVDIFCSDLYLKVNF------------------PPYLFELDLAAPIDDEKSSAKIGN-GVL   62 (78)
T ss_pred             cCCEEEEEEEeCCCccccceEEEecCEEEEcC------------------CCEEEEEeCcccccccccEEEEeC-CEE
Confidence            56788999999999999999999999999977                  136789999999999999999865 444

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=96.86  E-value=0.0024  Score=50.62  Aligned_cols=44  Identities=11%  Similarity=0.249  Sum_probs=40.5

Q ss_pred             CCceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        138 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       138 ~p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      .|.+.+...++.|.|.+||-.|++++|.|.+.++.|+|.|++++
T Consensus        40 ~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~~~~l~I~g~~~~   83 (146)
T COG0071          40 TPPVDIEETDDEYRITAELPGVDKEDIEITVEGNTLTIRGEREE   83 (146)
T ss_pred             CCcEEEEEcCCEEEEEEEcCCCChHHeEEEEECCEEEEEEEecc
Confidence            47778888888999999999999999999999999999999974

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=96.77  E-value=0.0032  Score=45.74  Aligned_cols=41  Identities=12%  Similarity=0.174  Sum_probs=37.2

Q ss_pred             eeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        141 IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       141 i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      +.+...++.|.|.+|+-.|+|++|.|.+.++.|+|.|+++.
T Consensus         3 ~di~e~~~~~~i~~~lPGv~~edi~v~~~~~~L~I~g~~~~   43 (93)
T cd06471           3 TDIKETDDEYIVEADLPGFKKEDIKLDYKDGYLTISAKRDE   43 (93)
T ss_pred             eeEEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcc
Confidence            45667889999999999999999999999999999998863

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>PRK10743 heat shock protein IbpA; Provisional

Probab=96.70  E-value=0.0038  Score=49.74  Aligned_cols=43  Identities=19%  Similarity=0.334  Sum_probs=37.8

Q ss_pred             Cceeee-cCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        139 PLIQED-GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       139 p~i~~~-~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      |.+.+. .+++.|.|.+|+-.|+|++|.|.+.+|.|+|+|++++
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v~~~~LtI~ge~~~   78 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITAQDNLLVVKGAHAD   78 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEECc
Confidence            445665 4789999999999999999999999999999998754

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=96.30  E-value=0.0091  Score=43.51  Aligned_cols=38  Identities=16%  Similarity=0.148  Sum_probs=33.6

Q ss_pred             eeecCCCcEEEEEEcCccCCCceEEEEeCC-EEEEEEec
Q psy16269        142 QEDGDNKLLKLRFDVSQYQPEEIVVKTVDN-KLLVLSTY  179 (186)
Q Consensus       142 ~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~-~l~V~gkH  179 (186)
                      .+.+.++.|.|.+|+-.|+||+|+|++.++ .|+|+|+.
T Consensus         3 dv~E~~~~~~i~~~lPGv~~edi~i~v~~~~~L~I~g~~   41 (92)
T cd06472           3 DWKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGER   41 (92)
T ss_pred             cEEEcCCeEEEEEECCCCChHhEEEEEeCCCEEEEEEEe
Confidence            345688999999999999999999999864 89999975

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=96.21  E-value=0.03  Score=38.28  Aligned_cols=64  Identities=11%  Similarity=0.099  Sum_probs=53.4

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      +.+...|.+++..-.++++.|.+.++.|.|.++...             ...|...+.|+..||++..+.++.. +.|
T Consensus         4 ~~~~v~i~v~~~~~~~~~~~v~~~~~~l~i~~~~~~-------------~~~~~~~~~L~~~I~~~~s~~~~~~-~~l   67 (84)
T cd06463           4 TLDEVTITIPLKDVTKKDVKVEFTPKSLTVSVKGGG-------------GKEYLLEGELFGPIDPEESKWTVED-RKI   67 (84)
T ss_pred             cccEEEEEEEcCCCCccceEEEEecCEEEEEeeCCC-------------CCceEEeeEccCccchhhcEEEEeC-CEE
Confidence            467788999999999999999999999999997541             1456788899999999999999965 444

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=96.00  E-value=0.015  Score=38.63  Aligned_cols=36  Identities=19%  Similarity=0.267  Sum_probs=33.0

Q ss_pred             CCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        146 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       146 ~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      .++.+.+.+++..+.+++|.|++.++.|.|+|++..
T Consensus         4 ~~~~v~i~i~~~~~~~~~i~v~~~~~~l~v~~~~~~   39 (80)
T cd00298           4 TDDEVVVTVDLPGVKKEDIKVEVEDNVLTISGKREE   39 (80)
T ss_pred             cCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcC
Confidence            447899999999999999999999999999999863

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=95.85  E-value=0.018  Score=46.26  Aligned_cols=41  Identities=15%  Similarity=0.327  Sum_probs=36.3

Q ss_pred             Cceeeec-CCCcEEEEEEcCccCCCceEEEEeCCEEEEEEec
Q psy16269        139 PLIQEDG-DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTY  179 (186)
Q Consensus       139 p~i~~~~-~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkH  179 (186)
                      |.+.+.. +++.|.|.+|+-.|++++|.|.+.+|.|+|+|+.
T Consensus        33 P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~~~~LtI~ge~   74 (142)
T PRK11597         33 PPYNIEKSDDNHYRITLALAGFRQEDLDIQLEGTRLTVKGTP   74 (142)
T ss_pred             CcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEECCEEEEEEEE
Confidence            5566664 5679999999999999999999999999999974

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=94.71  E-value=0.14  Score=35.85  Aligned_cols=62  Identities=15%  Similarity=0.188  Sum_probs=51.8

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCC
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSN  118 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~  118 (186)
                      .++...|.+.++...++++.|...++.|.|.+++.      +       .++|.-.+.|+..|+++..+.++...
T Consensus         5 t~~~v~i~v~~~~~~~~~v~v~~~~~~l~i~~~~~------~-------~~~~~~~~~L~~~I~~~~s~~~~~~~   66 (84)
T cd06466           5 TDTSVTVTIYAKNVDKEDVKVEFNEQSLSVSIILP------G-------GSEYQLELDLFGPIDPEQSKVSVLPT   66 (84)
T ss_pred             cCCEEEEEEEECCCCHHHCEEEEecCEEEEEEECC------C-------CCeEEEecccccccCchhcEEEEeCe
Confidence            56778899999999999999999999999988754      0       14577788999999999888887753

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=94.35  E-value=0.59  Score=31.61  Aligned_cols=62  Identities=18%  Similarity=0.202  Sum_probs=49.0

Q ss_pred             CCCeEEEEEeCCC--cCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCC
Q psy16269         44 DNKLLKLRFDVSQ--YQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSN  118 (186)
Q Consensus        44 ~~~kF~V~lDV~~--F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~  118 (186)
                      +.+...|.+.+..  .+|++|.|.+.++.|.|.++...          +   .+|.-...|...|+++..+.++..+
T Consensus         8 t~~~V~v~i~~~~~~~~~~dv~v~~~~~~l~v~~~~~~----------~---~~~~~~~~L~~~I~~~~s~~~~~~~   71 (79)
T PF04969_consen    8 TDDEVTVTIPVKPVDISKEDVKVDFTDTSLSVSIKSGD----------G---KEYLLEGELFGEIDPDESTWKVKDN   71 (79)
T ss_dssp             ESSEEEEEEE-TTTTSSGGGEEEEEETTEEEEEEEETT----------S---CEEEEEEEBSS-BECCCEEEEEETT
T ss_pred             CCCEEEEEEEEcCCCCChHHeEEEEEeeEEEEEEEccC----------C---ceEEEEEEEeeeEcchhcEEEEECC
Confidence            5677888999955  56999999999999999976441          1   6677888899999999998888864

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>CHL00140 rpl6 ribosomal protein L6; Validated

Probab=89.69  E-value=0.32  Score=40.32  Aligned_cols=108  Identities=19%  Similarity=0.122  Sum_probs=56.4

Q ss_pred             CCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcccccCCCCCCc----ccc
Q psy16269         59 PEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNT----YLD  134 (186)
Q Consensus        59 PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~~a~~p~~~~----~~~  134 (186)
                      |+.++|.+.++.|.|.|..-            .+++.|...+.+  .+|-+.+..+...+..-.-+...+++.    -+.
T Consensus        12 P~~V~v~i~~~~v~vkGp~G------------~l~~~~~~~v~i--~~~~~~i~v~~~~~~k~~~a~~gt~~slI~Nmi~   77 (178)
T CHL00140         12 PDNVNVSIDDQIIKVKGPKG------------TLSRKIPDLITI--EIQDNSLFVSKKDESKKARALHGLYRTLINNMVI   77 (178)
T ss_pred             CCCCEEEEECCEEEEECCCE------------EEEEECCCCeEE--EEeCCEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998744            456666553322  122233433332221110001111111    112


Q ss_pred             cCCCCc----------eeeecCCCcEEEEE----EcCccCCCceEEEEeCC-EEEEEEecc
Q psy16269        135 NISSPL----------IQEDGDNKLLKLRF----DVSQYQPEEIVVKTVDN-KLLVLSTYT  180 (186)
Q Consensus       135 ~~~~p~----------i~~~~~~~~f~v~l----DV~~F~PeEI~VK~~~~-~l~V~gkHe  180 (186)
                      ++..++          ..+...++...+.|    ++.-.=|++++|++.+. .|+|+|--.
T Consensus        78 GVt~Gf~~~L~lvGvGyr~~~~g~~l~l~LG~sh~i~~~IP~gv~v~~~~~t~I~i~G~dk  138 (178)
T CHL00140         78 GVSEGFEKKLELQGVGYRAQVQGKDLILNLGYSHPVKIKIPPGISVEVENNTNITIKGIDK  138 (178)
T ss_pred             hcccCceEEEEEEEEEEEEEEeCCcEEEEecCCeeEEEECCCCeEEEeCCCCEEEEEECCH
Confidence            222221          12223344444433    33455699999999876 799999543

>PRK05518 rpl6p 50S ribosomal protein L6P; Reviewed

Probab=89.22  E-value=0.86  Score=38.03  Aligned_cols=106  Identities=12%  Similarity=0.007  Sum_probs=56.5

Q ss_pred             CCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEE-EEecCCCCCCCCceEEecCCCcccccCCCCCCc-----
Q psy16269         58 QPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRR-QQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNT-----  131 (186)
Q Consensus        58 ~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R-~y~LP~~VD~~~vtstls~~~~L~~a~~p~~~~-----  131 (186)
                      =|+.++|++.++.|.|+|.+-            ..++.|.. .+.+  .++-..+..+...+..-..+...+++.     
T Consensus        12 IP~~V~v~i~~~~v~VkGp~G------------~L~~~~~~~~v~i--~~~~~~i~v~~~~~~kk~ra~~gt~rslI~Nm   77 (180)
T PRK05518         12 IPEGVTVEIEGLVVTVKGPKG------------ELTRDFWYPGVTI--SVEDGKVVIETEFARKKTKAMVGTFASHIKNM   77 (180)
T ss_pred             cCCCCEEEEECCEEEEECCCe------------EEEEEecCCcEEE--EEECCEEEEEECCCCHHHHHHHHHHHHHHHhh
Confidence            399999999999999999755            45566644 1211  111123333332221110011111111     


Q ss_pred             ------------ccccCCCCceeeecCCCcEEE--EE----EcCccCCCceEEEEeCCEEEEEEe
Q psy16269        132 ------------YLDNISSPLIQEDGDNKLLKL--RF----DVSQYQPEEIVVKTVDNKLLVLST  178 (186)
Q Consensus       132 ------------~~~~~~~p~i~~~~~~~~f~v--~l----DV~~F~PeEI~VK~~~~~l~V~gk  178 (186)
                                  .+-++.-|+ .....++.+.+  .|    ++.-.-|+.|+|.+.+..|+|+|-
T Consensus        78 I~GVt~Gf~~~LelvGvGypi-ra~~~g~~l~l~n~LG~Sh~v~~~iP~gV~v~~~~t~I~i~Gi  141 (180)
T PRK05518         78 IKGVTEGFEYKLKIVYSHFPM-QVKVQGNEVVIENFLGEKSPRRAKILGGVKVKVKGEDVIVEGI  141 (180)
T ss_pred             heecccceEEEEEEEecCccE-EEEEcCCEEEEEeccccceeEEEeCCCCeEEEecCCEEEEEeC
Confidence                        111222221 22334455554  23    556678999999998878999994

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=89.07  E-value=2  Score=36.11  Aligned_cols=72  Identities=13%  Similarity=0.084  Sum_probs=50.5

Q ss_pred             CCceEeeCCCC-eEEEEEeCCCcCCCc-eEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceE
Q psy16269         36 SPLIQEDGDNK-LLKLRFDVSQYQPEE-IVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTV  113 (186)
Q Consensus        36 ~p~i~~~~~~~-kF~V~lDV~~F~PEE-I~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vts  113 (186)
                      .+.+.+...++ .+.|..|+.+-..++ |.|.+..+...+..++.               ..+.+++.||.. +++..++
T Consensus        91 ~~~vdtre~dDge~~VvAdLPGVs~dd~idV~l~~d~~~L~i~~~---------------~~~~krv~L~~~-~~e~~~~  154 (177)
T PF05455_consen   91 SIHVDTRERDDGELVVVADLPGVSDDDAIDVTLDDDEGALTIRVG---------------EKYLKRVALPWP-DPEITSA  154 (177)
T ss_pred             eeeeeeEecCCCcEEEEEeCCCCCcccceeeEeecCCceEEEecC---------------CceEeeEecCCC-ccceeeE
Confidence            45555554444 799999999998888 99999955544444333               114589999977 6788888


Q ss_pred             EecCCCccccc
Q psy16269        114 TSSSNDALTAA  124 (186)
Q Consensus       114 tls~~~~L~~a  124 (186)
                      ++. ||.|...
T Consensus       155 t~n-NgILEIr  164 (177)
T PF05455_consen  155 TFN-NGILEIR  164 (177)
T ss_pred             EEe-CceEEEE
Confidence            876 6777443

>PTZ00027 60S ribosomal protein L6; Provisional

Probab=88.84  E-value=0.55  Score=39.46  Aligned_cols=108  Identities=11%  Similarity=0.071  Sum_probs=57.1

Q ss_pred             cCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEE---EEecCCCCCCCCceEEecCCCcccccCCCCCCcc-
Q psy16269         57 YQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRR---QQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNTY-  132 (186)
Q Consensus        57 F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R---~y~LP~~VD~~~vtstls~~~~L~~a~~p~~~~~-  132 (186)
                      .=|+.++|.+.++.|.|+|..-            ..++.|..   .+.+  .++-..|..+...+..-..|...+++.. 
T Consensus        11 ~IP~~V~V~i~~~~v~VkGp~G------------~L~~~~~~~~~~i~i--~~~~~~i~v~~~~~~~k~~a~~Gt~rslI   76 (190)
T PTZ00027         11 RIPEGVTVTVKSRKVTVTGKYG------------ELTRSFRHLPVDIKL--SKDGKYIKVEMWFGTPSHLACIRTVCSHI   76 (190)
T ss_pred             ecCCCCEEEEECCEEEEECCCc------------eEEEEecCCCceEEE--EeCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            3499999999999999998743            56666654   2322  0111223333222111001111122111 


Q ss_pred             ---cccCCCCce------------e--eecCCCcEEE--EE----EcCccCCCceEEEEeC---CEEEEEEe
Q psy16269        133 ---LDNISSPLI------------Q--EDGDNKLLKL--RF----DVSQYQPEEIVVKTVD---NKLLVLST  178 (186)
Q Consensus       133 ---~~~~~~p~i------------~--~~~~~~~f~v--~l----DV~~F~PeEI~VK~~~---~~l~V~gk  178 (186)
                         +.++..++.            +  ...+++...+  .|    ++.-.=|+.|+|.+..   +.|+|+|-
T Consensus        77 ~NmI~GVt~Gf~~~LeivGvGyra~~~v~~~g~~L~l~N~LG~Sh~i~~~iP~gv~v~~~~~~~t~I~i~G~  148 (190)
T PTZ00027         77 KNMMTGVTKKFQYKMRLVYAHFPINSNITDNGKTIEIRNFLGEKRVRTVKMLPGVVVEKSESVKDEIIVTGA  148 (190)
T ss_pred             HHHhhhhcCCEEEEEEEEEeeeeEEEEEcCCCCEEEEEccCCCceeEEEECCCCeEEEeCCCCCCEEEEEeC
Confidence               122222211            2  2234455555  23    5556779999999975   58999994

>PTZ00179 60S ribosomal protein L9; Provisional

Probab=87.42  E-value=0.66  Score=38.96  Aligned_cols=105  Identities=14%  Similarity=0.153  Sum_probs=56.9

Q ss_pred             CCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEE---EEecCCCCCCCCceEEecCCCcccccCCCCCCc----
Q psy16269         59 PEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRR---QQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNT----  131 (186)
Q Consensus        59 PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R---~y~LP~~VD~~~vtstls~~~~L~~a~~p~~~~----  131 (186)
                      |+.++|++.++.|.|.|..-            ..++.|..   .+.+  +.+-..|..+...+..-..+-..+++.    
T Consensus        12 P~~V~V~i~~~~ItVkGpkG------------~Ls~~~~~~~~~i~i--~~~~~~I~v~~~~~~kk~~al~Gt~rslI~N   77 (189)
T PTZ00179         12 PEDVTVSVKDRIVTVKGKRG------------TLTKDLRHLQLDFRV--NKKNRTFTAVRWFGSKIPNSTINTALSHVRN   77 (189)
T ss_pred             CCCCEEEEeCCEEEEECCCc------------EEEEEcCCCCcEEEE--EecCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999998744            45666665   3433  222223333322221110011111111    


Q ss_pred             -------------ccccCCCCceeeecCCCcEEE--EE----EcCccCCCceEEEEeC-----CEEEEEEe
Q psy16269        132 -------------YLDNISSPLIQEDGDNKLLKL--RF----DVSQYQPEEIVVKTVD-----NKLLVLST  178 (186)
Q Consensus       132 -------------~~~~~~~p~i~~~~~~~~f~v--~l----DV~~F~PeEI~VK~~~-----~~l~V~gk  178 (186)
                                   .+.++.-|. .+...++.+.+  .|    ++.-.=|+.++|++.+     +.|+|+|-
T Consensus        78 MI~GVt~GF~k~L~ivgvgyp~-ra~v~g~~l~l~N~LG~sh~~~~~ip~gv~v~~~~~~~~k~~i~i~G~  147 (189)
T PTZ00179         78 MITGVTKGFRFKVRFAYAHFPI-SVSVENQLVEIRNFLGEKRVRRQVVADTVKVYRTDPSKVKDELVLEGN  147 (189)
T ss_pred             HhhhhcCCEEEEEEEEEeCcce-EEEEcCCEEEEEecCCCCccEEEECCCCEEEEecCCcccCCEEEEEeC
Confidence                         112222222 23335555555  23    4446679999999985     47999984

>TIGR03653 arch_L6P archaeal ribosomal protein L6P

Probab=87.35  E-value=0.71  Score=38.12  Aligned_cols=24  Identities=17%  Similarity=0.195  Sum_probs=20.1

Q ss_pred             EcCccCCCceEEEEeCCEEEEEEe
Q psy16269        155 DVSQYQPEEIVVKTVDNKLLVLST  178 (186)
Q Consensus       155 DV~~F~PeEI~VK~~~~~l~V~gk  178 (186)
                      ++.-.-|+.|+|.+.+..|+|+|-
T Consensus       112 ~i~~~iP~gI~v~~~~~~I~i~G~  135 (170)
T TIGR03653       112 PRRAKIPGGVKVKVKGEEVIVTGI  135 (170)
T ss_pred             eEEEECCCCeEEEecCCEEEEEeC
Confidence            555677999999998889999994

Members of this protein family are the archaeal ribosomal protein L6P. The top-scoring proteins not selected by this model are eukaryotic cytosolic ribosomal protein L9. Bacterial ribosomal protein L6 scores lower and is described by a distinct model.

>TIGR03654 L6_bact ribosomal protein L6, bacterial type

Probab=87.16  E-value=1.2  Score=36.84  Aligned_cols=20  Identities=20%  Similarity=0.165  Sum_probs=18.2

Q ss_pred             CCceEEEEECCEEEEEEEee
Q psy16269         59 PEEIVVKTVDNKLLVSTLTT   78 (186)
Q Consensus        59 PEEI~Vkv~~~~L~V~gkHe   78 (186)
                      |+.++|.+.++.|.|+|..-
T Consensus        11 P~~V~v~~~~~~v~v~Gp~G   30 (175)
T TIGR03654        11 PAGVEVTIDGNVVTVKGPKG   30 (175)
T ss_pred             CCCcEEEEeCCEEEEEcCCe
Confidence            99999999999999998754

>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins

Probab=86.39  E-value=3.9  Score=28.86  Aligned_cols=62  Identities=10%  Similarity=0.094  Sum_probs=49.0

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCC
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSN  118 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~  118 (186)
                      .++.-.|.+.+++..+++++|+..++.|.+.++...             .++|.-.+.|...|+|+..+.++...
T Consensus         5 ~~~~V~iti~~k~~~~~~~~v~~~~~~l~~~~~~~~-------------~~~y~~~~~L~~~I~p~~s~~~v~~~   66 (84)
T cd06489           5 TESQVVITILIKNVKPEDVSVEFEKRELSATVKLPS-------------GNDYSLKLHLLHPIVPEQSSYKILST   66 (84)
T ss_pred             cCCEEEEEEEECCCCHHHCEEEEeCCEEEEEEECCC-------------CCcEEEeeecCceecchhcEEEEeCc
Confidence            355678889999999999999999999999987631             12355667999999999777777643

hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.

>PRK05498 rplF 50S ribosomal protein L6; Validated

Probab=82.89  E-value=2.1  Score=35.37  Aligned_cols=20  Identities=20%  Similarity=0.177  Sum_probs=18.2

Q ss_pred             CCceEEEEECCEEEEEEEee
Q psy16269         59 PEEIVVKTVDNKLLVSTLTT   78 (186)
Q Consensus        59 PEEI~Vkv~~~~L~V~gkHe   78 (186)
                      |+.++|.+.++.|.|.|..-
T Consensus        12 P~~V~v~~~~~~v~vkGp~G   31 (178)
T PRK05498         12 PAGVEVTINGNVVTVKGPKG   31 (178)
T ss_pred             CCCCEEEEECCEEEEECCCE
Confidence            99999999999999999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	186
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	3e-06
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	2e-05
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	2e-05
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	5e-05
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	2e-05
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	5e-05
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	1e-04
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	2e-04
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	1e-04
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	3e-04

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 51.4 bits (122), Expect = 3e-08
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 23/173 (13%)

Query: 23  PRPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQ- 81
            +PG   +L +     + +DG     K+ F+V  ++ EEI +K   NKL+V    +    
Sbjct: 92  TQPGELDFLKDAYE--VGKDGRLHF-KVYFNVKNFKAEEITIKADKNKLVVRAQKSVACG 148

Query: 82  --------IRCEPIPARRDRSQNRRQQTIDG----------NIGSSSNTVTSSSNDALTA 123
                    R  P+P   DR+  +   T D               +             +
Sbjct: 149 DAAMSESVGRSIPLPPSVDRNHIQATITTDDVLVIEAPVNEPNYKAIKLSPEKGLAIQPS 208

Query: 124 APRPGPNTYLDNISSPLIQEDGDNKLLKLRFDV-SQYQPEEIVVKTVDNKLLV 175
             +       +     ++  +  +K + L   V   + P+++ V    NK+ V
Sbjct: 209 EVQERQLAVKNKEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYV 261

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-06
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 62/168 (36%)

Query: 31  LDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKL------LVSTLTTKTQIRC 84
           +D+I   ++ +D  +  L+L F     + EE+V K V+  L      L+S + T+ +   
Sbjct: 51  IDHI---IMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS 106

Query: 85  EPIP---ARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNTYLDNISSPLI 141
                   +RDR  N  Q     N+                   R               
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNV------------------SRL-------------- 134

Query: 142 QEDGDNKLLKLRFDVSQYQPEEIVV--------KTVDNKLLVLSTYTN 181
                   LKLR  + + +P + V+        KT     + L    +
Sbjct: 135 -----QPYLKLRQALLELRPAKNVLIDGVLGSGKTW----VALDVCLS 173

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 39/200 (19%), Positives = 64/200 (32%), Gaps = 49/200 (24%)

Query: 3   ALNSSSNT-VTS---SSNDALTAAPRPGPNTYLDNISSPLIQEDGDNKLLK-LRFDVSQY 57
           A N S    +T+      D L+AA     +  LD+ S  L  ++  + LLK L       
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTT--HISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 58  QPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSS 117
            P E V+ T  N   +S +     IR            N +    D        T+  SS
Sbjct: 319 -PRE-VLTT--NPRRLSII--AESIRDGL-----ATWDNWKHVNCD-----KLTTIIESS 362

Query: 118 NDALTAAPRPGPNT----YLD--------NISSPLIQEDGDNKLLKLRFDVSQYQPEEIV 165
            + L       P      +          +I + L+          + FDV +     +V
Sbjct: 363 LNVLE------PAEYRKMFDRLSVFPPSAHIPTILLS--------LIWFDVIKSDVMVVV 408

Query: 166 VKTVDNKLLVLSTYTNSYLL 185
            K     L+      ++  +
Sbjct: 409 NKLHKYSLVEKQPKESTISI 428

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus} Length = 101

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 8/93 (8%)

Query: 39  IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRR 98
           +  D       +  DV  + PEEI VK V + + V     + + R +         +  R
Sbjct: 6   VPTDPGY--FSVLLDVKHFSPEEISVKVVGDHVEVH---ARHEERPD--EHGFIAREFHR 58

Query: 99  QQTIDGNIGSSSNTVTSSSNDALT-AAPRPGPN 130
           +  +   +  ++ T   S    L+  A      
Sbjct: 59  RYRLPPGVDPAAVTSALSPEGVLSIQATPASAQ 91

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus} Length = 101

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 141 IQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 175
           +  D       +  DV  + PEEI VK V + + V
Sbjct: 6   VPTDPGY--FSVLLDVKHFSPEEISVKVVGDHVEV 38

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A Length = 90

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 41 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVS 74
              ++   +  DV  + PEE+ VK + + + V 
Sbjct: 2  AMEKDRF-SVNLDVKHFSPEELKVKVLGDVIEVH 34

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A Length = 90

 Score = 39.3 bits (92), Expect = 5e-05
 Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 175
               ++   +  DV  + PEE+ VK + + + V
Sbjct: 2   AMEKDRF-SVNLDVKHFSPEELKVKVLGDVIEV 33

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A Length = 85

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 8/34 (23%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 41 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVS 74
              ++  ++  DV+ + P+E+ VKT D  + ++
Sbjct: 3  SHTADRW-RVSLDVNHFAPDELTVKTKDGVVEIT 35

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A Length = 85

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 8/33 (24%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 143 EDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 175
               ++  ++  DV+ + P+E+ VKT D  + +
Sbjct: 3   SHTADRW-RVSLDVNHFAPDELTVKTKDGVVEI 34

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A Length = 106

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVS 74
          S + +   D     +  DV  + PE++ VK  ++ + + 
Sbjct: 2  SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIH 40

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A Length = 106

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 138 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 175
           S + +   D     +  DV  + PE++ VK  ++ + +
Sbjct: 2   SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEI 39

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A Length = 175

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 10/51 (19%), Positives = 19/51 (37%)

Query: 24  RPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVS 74
            P          + L +   +     +  DV  + PEE+ VK + + + V 
Sbjct: 51  PPSFLRAPSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVH 101

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A Length = 175

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 10/50 (20%), Positives = 19/50 (38%)

Query: 126 RPGPNTYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLV 175
            P          + L +   +     +  DV  + PEE+ VK + + + V
Sbjct: 51  PPSFLRAPSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEV 100

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	186
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.88
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.74
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	99.71
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.71
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	99.71
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	99.67
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	99.46
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.45
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	99.41
4fei_A	102	Heat shock protein-related protein; stress respons	99.39
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	99.37
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	99.29
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	98.16
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	98.08
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	98.02
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	97.94
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	97.66
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	97.63
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	97.6
4fei_A	102	Heat shock protein-related protein; stress respons	97.49
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	97.42
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	97.0
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	95.23
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	93.84
1nkw_E	212	50S ribosomal protein L6; ribosome, large subunit,	91.16
3bbo_I	223	Ribosomal protein L6; large ribosomal subunit, spi	81.73
1rl6_A	177	Protein (ribosomal protein L6); RNA-binding protei	80.58

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.88  E-value=2.2e-22  Score=177.15  Aligned_cols=130  Identities=21%  Similarity=0.277  Sum_probs=108.8

Q ss_pred             eEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcccc---
Q psy16269         47 LLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTA---  123 (186)
Q Consensus        47 kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~~---  123 (186)
                      .|.|.+||.+|+||+|+|++.++.|+|+|+|+.+.+      +++.+++|.|+|.||++||++.|+|+++.||.|+.   
T Consensus       113 ~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e------~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGVL~I~lP  186 (314)
T 2bol_A          113 HFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACG------DAAMSESVGRSIPLPPSVDRNHIQATITTDDVLVIEAP  186 (314)
T ss_dssp             EEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTT------CCCBCCCEEEEEECCTTBCGGGCEEEECSSSEEEEEEE
T ss_pred             EEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCC------CCEEEEEEEEEEECCCCccccccEEEEeCCCEEEEEEe
Confidence            899999999999999999999999999999985432      24789999999999999999999999999999932   


Q ss_pred             -----------------cCCCCCCcc----cccCCCCceeeec-CCCcEEEEEEc-CccCCCceEEEEeCCEEEEEEecc
Q psy16269        124 -----------------APRPGPNTY----LDNISSPLIQEDG-DNKLLKLRFDV-SQYQPEEIVVKTVDNKLLVLSTYT  180 (186)
Q Consensus       124 -----------------a~~p~~~~~----~~~~~~p~i~~~~-~~~~f~v~lDV-~~F~PeEI~VK~~~~~l~V~gkHe  180 (186)
                                       +++|.+..|    +++..++-|...+ +++.|.|.+++ -.|+||+|+|++.+|.|+|+|+|+
T Consensus       187 K~~~~~~~I~it~~~ql~Iqp~s~~q~~l~vkg~~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~  266 (314)
T 2bol_A          187 VNEPNYKAIKLSPEKGLAIQPSEVQERQLAVKNKEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTG  266 (314)
T ss_dssp             BSSCCTTTEEEETTTEEEECCBCCSSCCSCCCSCCEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC
T ss_pred             ccCcccceeecccCCccCcCCCccccceeecccCCCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEe
Confidence                             122334556    5666666554444 77899999999 899999999999999999999997


Q ss_pred             cc
Q psy16269        181 NS  182 (186)
Q Consensus       181 e~  182 (186)
                      ++
T Consensus       267 ~~  268 (314)
T 2bol_A          267 KE  268 (314)
T ss_dssp             --
T ss_pred             cc
Confidence            64

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.74  E-value=1.5e-17  Score=124.69  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=75.2

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEe
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTS  115 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstl  115 (186)
                      +++..+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+|+++.++     +++..|+|.|+|.||.+||++.++|+|
T Consensus         2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~eF~R~~~LP~~vd~~~i~A~~   76 (106)
T 3l1e_A            2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDD-----HGYISREFHRRYRLPSNVDQSALSCSL   76 (106)
T ss_dssp             CCSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETT-----TEEEEEEEEEEEECCTTBCTTSCEEEE
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCC-----CCEEEEEEEEEEECCCCcChhHcEEEE
Confidence            466777889999999999999999999999999999999999887653     468999999999999999999999999


Q ss_pred             cCCCccc
Q psy16269        116 SSNDALT  122 (186)
Q Consensus       116 s~~~~L~  122 (186)
                      +.||.|+
T Consensus        77 s~~GvL~   83 (106)
T 3l1e_A           77 SADGMLT   83 (106)
T ss_dssp             CTTSEEE
T ss_pred             CCCCEEE
Confidence            9999993

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=99.71  E-value=4.1e-17  Score=132.85  Aligned_cols=83  Identities=20%  Similarity=0.240  Sum_probs=71.7

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEe
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTS  115 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstl  115 (186)
                      ..++.+..++++|.|.+||.+|+||||+|++.++.|+|+|+|++++++     +++++|+|.|+|.||++||++.|+|++
T Consensus        63 ~~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~-----~~~~~reF~R~~~LP~~Vd~~~i~A~~  137 (175)
T 2klr_A           63 TGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDE-----HGFISREFHRKYRIPADVDPLTITSSL  137 (175)
T ss_dssp             ------CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEET-----TEEEEEEEEEEEECTTTCCTTTCEEEE
T ss_pred             CCceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccC-----CceEEEEEEEEEECCCCcChhHeEEEE
Confidence            445667779999999999999999999999999999999999987653     479999999999999999999999999


Q ss_pred             cCCCcccc
Q psy16269        116 SSNDALTA  123 (186)
Q Consensus       116 s~~~~L~~  123 (186)
                      +.||.|+.
T Consensus       138 s~dGvL~I  145 (175)
T 2klr_A          138 SSDGVLTV  145 (175)
T ss_dssp             CTTSCEEE
T ss_pred             cCCCEEEE
Confidence            99999943

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.71  E-value=3.3e-17  Score=118.30  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=65.4

Q ss_pred             CCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCccc
Q psy16269         43 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALT  122 (186)
Q Consensus        43 ~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~  122 (186)
                      .+++.|.|.+|+.+|+||+|+|++.++.|+|+|+|+++.++     .++.+++|.|+|.||++||++.++|++..||.|+
T Consensus         4 E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~   78 (85)
T 3q9p_A            4 HTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDE-----HGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLT   78 (85)
T ss_dssp             CCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC------------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEE
T ss_pred             CcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCC-----CCEEEEEEEEEEECCCCcChHHcEEEECCCCEEE
Confidence            47889999999999999999999999999999999876543     3578999999999999999999999999999994


Q ss_pred             c
Q psy16269        123 A  123 (186)
Q Consensus       123 ~  123 (186)
                      .
T Consensus        79 I   79 (85)
T 3q9p_A           79 V   79 (85)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=99.71  E-value=7e-17  Score=119.99  Aligned_cols=81  Identities=20%  Similarity=0.242  Sum_probs=72.6

Q ss_pred             CceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEec
Q psy16269         37 PLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSS  116 (186)
Q Consensus        37 p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls  116 (186)
                      +++.+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+++++.++     +++..|+|.|+|.||.+||++.++|+|+
T Consensus         2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~-----~~~~~~eF~R~~~LP~~vd~~~i~A~~s   76 (101)
T 2wj5_A            2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDE-----HGFIAREFHRRYRLPPGVDPAAVTSALS   76 (101)
T ss_dssp             CCCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSST-----TCCEEEEEEEEEECCTTBCTTCCEEEEC
T ss_pred             CcEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCC-----CCEEEEEEEEEEECCCCcChhHCEEEEC
Confidence            34556678999999999999999999999999999999999876532     4689999999999999999999999999


Q ss_pred             CCCccc
Q psy16269        117 SNDALT  122 (186)
Q Consensus       117 ~~~~L~  122 (186)
                      .||.|+
T Consensus        77 ~nGvL~   82 (101)
T 2wj5_A           77 PEGVLS   82 (101)
T ss_dssp             TTSEEE
T ss_pred             CCCEEE
Confidence            999993

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=99.67  E-value=3.2e-16  Score=113.90  Aligned_cols=76  Identities=21%  Similarity=0.261  Sum_probs=66.9

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      +.+++.|.|.+|+.+|+||+|+|++.++.|+|+|+++++.++     +++..|+|.|+|.||.+||++.++|+|+.||.|
T Consensus         2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL   76 (90)
T 2y1y_A            2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDE-----HGFISREFHRKYRIPADVDPLTITSSMSSDGVL   76 (90)
T ss_dssp             ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECS-----SSEEEEEEEEEEECCTTBCGGGCEEEECTTSEE
T ss_pred             CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCC-----CCEEEEEEEEEEECCCCcChhHcEEEECCCCEE
Confidence            357889999999999999999999999999999999876532     468999999999999999999999999999999


Q ss_pred             c
Q psy16269        122 T  122 (186)
Q Consensus       122 ~  122 (186)
                      +
T Consensus        77 ~   77 (90)
T 2y1y_A           77 T   77 (90)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=99.46  E-value=5.3e-13  Score=97.70  Aligned_cols=83  Identities=14%  Similarity=0.140  Sum_probs=69.6

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCcee-----eeeEEEEEecCCCCCCCC
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRD-----RSQNRRQQTIDGNIGSSS  110 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~v-----sReF~R~y~LP~~VD~~~  110 (186)
                      .|.+.+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|++.....+.   .+.+.     +..|.|+|.||.+||++.
T Consensus         4 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~---~~~~~~~er~~g~f~r~~~LP~~vd~~~   80 (100)
T 3gla_A            4 VPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTE---TERFSRIERRYGSFHRRFALPDSADADG   80 (100)
T ss_dssp             CCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSS---GGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred             cCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccC---CccEEEEeecceEEEEEEECCCCcChHH
Confidence            3666777789999999999999999999999999999999987654322   12333     347999999999999999


Q ss_pred             ceEEecCCCccc
Q psy16269        111 NTVTSSSNDALT  122 (186)
Q Consensus       111 vtstls~~~~L~  122 (186)
                      ++|++. ||.|+
T Consensus        81 i~A~~~-~GvL~   91 (100)
T 3gla_A           81 ITAAGR-NGVLE   91 (100)
T ss_dssp             CEEEEE-TTEEE
T ss_pred             eEEEEe-CCEEE
Confidence            999997 79983

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.45  E-value=1.4e-13  Score=121.04  Aligned_cols=97  Identities=14%  Similarity=0.192  Sum_probs=74.8

Q ss_pred             CCCCCcc----cccCCCCceEeeC-CCCeEEEEEeC-CCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEE
Q psy16269         24 RPGPNTY----LDNISSPLIQEDG-DNKLLKLRFDV-SQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNR   97 (186)
Q Consensus        24 ~~~~~~~----~~~~~~p~i~~~~-~~~kF~V~lDV-~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~   97 (186)
                      .|.+.+|    +++..++-|...+ +++.|.|.+++ .+|+||+|+|++.+|.|+|+|+|+.+.+..  ....+.+.+|.
T Consensus       206 qp~s~~q~~l~vkg~~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~--~~~Er~~g~F~  283 (314)
T 2bol_A          206 QPSEVQERQLAVKNKEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTE--NASHSEHREFY  283 (314)
T ss_dssp             CCBCCSSCCSCCCSCCEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC--------------CEEEE
T ss_pred             CCCccccceeecccCCCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCce--EEEEEeeeEEE
Confidence            4577788    6777777655444 88899999999 999999999999999999999998765431  12246789999


Q ss_pred             EEEecCCCCCCCCceEEecCCCcccc
Q psy16269         98 RQQTIDGNIGSSSNTVTSSSNDALTA  123 (186)
Q Consensus        98 R~y~LP~~VD~~~vtstls~~~~L~~  123 (186)
                      |+|.||++||++.|+|++. ||.|+.
T Consensus       284 R~~~LP~~vd~~~i~A~~~-dGvL~i  308 (314)
T 2bol_A          284 KAFVTPEVVDASKTQAEIV-DGLMVV  308 (314)
T ss_dssp             EEEECSSEECGGGCEEEEE-TTEEEE
T ss_pred             EEEECCCCcChHHeEEEEe-CCEEEE
Confidence            9999999999999999997 899943

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=99.41  E-value=7.3e-13  Score=105.24  Aligned_cols=93  Identities=11%  Similarity=0.085  Sum_probs=73.0

Q ss_pred             cccccCCCCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCcee----eeeEEEEEecCC
Q psy16269         29 TYLDNISSPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRD----RSQNRRQQTIDG  104 (186)
Q Consensus        29 ~~~~~~~~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~v----sReF~R~y~LP~  104 (186)
                      .+..+..++-+.+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+++......++ ...+.    +..|.|+|.||.
T Consensus        49 ~~~~~~~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~-~~~~~Er~~~g~f~R~~~LP~  127 (161)
T 4eld_A           49 IQISGKGFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESE-RIIYSEIPEEEEIYRTIKLPA  127 (161)
T ss_dssp             CEEEEESCCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSC-EEEEECSCCCCEEEEEEECSS
T ss_pred             ccccCCcccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCc-eEEEEEeeccccEEEEEECCC
Confidence            3445555455788888999999999999999999999999999999998864322111 11122    248999999999


Q ss_pred             CCCCCCceEEecCCCcccc
Q psy16269        105 NIGSSSNTVTSSSNDALTA  123 (186)
Q Consensus       105 ~VD~~~vtstls~~~~L~~  123 (186)
                      +||++.++|++. ||.|+.
T Consensus       128 ~vd~~~i~A~~~-nGvL~I  145 (161)
T 4eld_A          128 TVKEENASAKFE-NGVLSV  145 (161)
T ss_dssp             CBCGGGCEEEEE-TTEEEE
T ss_pred             CcccccEEEEEE-CCEEEE
Confidence            999999999996 899933

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=99.39  E-value=2.3e-12  Score=95.26  Aligned_cols=83  Identities=17%  Similarity=0.179  Sum_probs=68.3

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEe
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTS  115 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstl  115 (186)
                      .|.+.+..+++.|.|.+|+.+|+||+|+|++.++.|+|+|+++.. ...  ....+.+..|.|+|.||.+||++.++|++
T Consensus         6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~-~~~--~~~er~~g~f~R~~~LP~~vd~~~i~A~~   82 (102)
T 4fei_A            6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGT-EHL--LRSERPSGRFVRELAFPEPVRPASGVASL   82 (102)
T ss_dssp             CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCC-SSC--SSCCSEEEEEEEEEECSSCBCTTCCEEEE
T ss_pred             cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecC-CCE--EEEEEeccEEEEEEECCCCcchhHcEEEE
Confidence            466777778899999999999999999999999999999998642 111  11123456899999999999999999999


Q ss_pred             cCCCccc
Q psy16269        116 SSNDALT  122 (186)
Q Consensus       116 s~~~~L~  122 (186)
                      . ||.|+
T Consensus        83 ~-~GvL~   88 (102)
T 4fei_A           83 A-GGVLT   88 (102)
T ss_dssp             E-TTEEE
T ss_pred             E-CCEEE
Confidence            6 89993

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=99.37  E-value=1.9e-12  Score=98.54  Aligned_cols=80  Identities=18%  Similarity=0.250  Sum_probs=69.6

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEEC-CEEEEEEEeeeecccCCCCCCceeee----eEEEEEecCCCCCCCC
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVD-NKLLVSTLTTKTQIRCEPIPARRDRS----QNRRQQTIDGNIGSSS  110 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~-~~L~V~gkHeek~d~~~~~~~g~vsR----eF~R~y~LP~~VD~~~  110 (186)
                      .|.+.+..+++.|.|.+|+.+|+||+|+|++.+ +.|+|+|+++...      .+++..+    .|.|+|.||.+||++.
T Consensus        24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~------~~~~~~~Er~~~f~R~~~LP~~vd~~~   97 (123)
T 3aab_A           24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE------PGVKYLTQRPKYVRKVIRLPYNVAKDA   97 (123)
T ss_dssp             CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC------CSCEEEECSCSEEEEEEECSSEECTTC
T ss_pred             CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC------CCeEEEEEEeEEEEEEEECCCCcCcch
Confidence            477777778899999999999999999999999 9999999987643      1245544    8999999999999999


Q ss_pred             c-eEEecCCCccc
Q psy16269        111 N-TVTSSSNDALT  122 (186)
Q Consensus       111 v-tstls~~~~L~  122 (186)
                      + +|++. ||.|+
T Consensus        98 i~~A~~~-~GvL~  109 (123)
T 3aab_A           98 EISGKYE-NGVLT  109 (123)
T ss_dssp             CCEEEEE-TTEEE
T ss_pred             hCeeEEc-CCEEE
Confidence            9 99995 89993

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=99.29  E-value=4.2e-12  Score=100.32  Aligned_cols=84  Identities=17%  Similarity=0.110  Sum_probs=70.2

Q ss_pred             CCceEeeCCCCeEEEEEeCCCcCCCceEEEEE-CCEEEEEEEeeeecccCCCCCCcee-----eeeEEEEEecCCCCCCC
Q psy16269         36 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTV-DNKLLVSTLTTKTQIRCEPIPARRD-----RSQNRRQQTIDGNIGSS  109 (186)
Q Consensus        36 ~p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~-~~~L~V~gkHeek~d~~~~~~~g~v-----sReF~R~y~LP~~VD~~  109 (186)
                      .|.+.+..+++.|.|.+|+.+|+||+|+|++. ++.|+|+|+++...++.   .+.+.     ++.|.|+|.||++||++
T Consensus        43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~---~~~~~~~Er~~g~F~R~~~LP~~vd~~  119 (151)
T 1gme_A           43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDK---NDKWHRVERSSGKFVRRFRLLEDAKVE  119 (151)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCT---TCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccC---CceEEEEeEeccEEEEEEECCCCcccc
Confidence            57778888899999999999999999999995 78999999988654321   12343     35799999999999999


Q ss_pred             CceEEecCCCcccc
Q psy16269        110 SNTVTSSSNDALTA  123 (186)
Q Consensus       110 ~vtstls~~~~L~~  123 (186)
                      .++|++ .||.|+.
T Consensus       120 ~i~A~~-~nGvL~I  132 (151)
T 1gme_A          120 EVKAGL-ENGVLTV  132 (151)
T ss_dssp             GCEEEE-ETTEEEE
T ss_pred             ceEEEE-ECCEEEE
Confidence            999999 5899943

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=98.16  E-value=3.2e-06  Score=62.80  Aligned_cols=45  Identities=18%  Similarity=0.332  Sum_probs=41.3

Q ss_pred             CCceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        138 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       138 ~p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      ++++++..+++.|.|.+|+..|+||+|.|++.++.|+|+|+|+++
T Consensus         2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~   46 (106)
T 3l1e_A            2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNER   46 (106)
T ss_dssp             CCSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEE
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccc
Confidence            356788889999999999999999999999999999999999764

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=98.08  E-value=3.1e-06  Score=68.52  Aligned_cols=45  Identities=20%  Similarity=0.335  Sum_probs=37.3

Q ss_pred             CCceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        138 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       138 ~p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      .+.+.+..++++|.|.+||.+|+||+|+|++.++.|+|+|+|+++
T Consensus        63 ~~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~  107 (175)
T 2klr_A           63 TGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEER  107 (175)
T ss_dssp             ------CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEE
T ss_pred             CCceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEccc
Confidence            445677788999999999999999999999999999999999875

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=98.02  E-value=8.9e-06  Score=58.04  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=34.9

Q ss_pred             ecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        144 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       144 ~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      ..+++.|.|.+|+..|+||+|.|++.++.|+|+|+|+++
T Consensus         3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~   41 (85)
T 3q9p_A            3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAAR   41 (85)
T ss_dssp             CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC--
T ss_pred             cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccc
Confidence            357789999999999999999999999999999999764

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=97.94  E-value=1.2e-05  Score=59.10  Aligned_cols=43  Identities=28%  Similarity=0.409  Sum_probs=38.9

Q ss_pred             ceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        140 LIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       140 ~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      .+.+..+++.|.|.+|+..|+||+|.|++.++.|+|+|+|+++
T Consensus         3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~   45 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEER   45 (101)
T ss_dssp             CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEC
T ss_pred             cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecc
Confidence            4556778899999999999999999999999999999999764

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=97.66  E-value=5.3e-05  Score=54.31  Aligned_cols=38  Identities=21%  Similarity=0.392  Sum_probs=33.2

Q ss_pred             cCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEecccc
Q psy16269        145 GDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTNS  182 (186)
Q Consensus       145 ~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee~  182 (186)
                      .+++.|.|.+|+-.|+|++|.|++.++.|+|+|+|+++
T Consensus         3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~   40 (90)
T 2y1y_A            3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEER   40 (90)
T ss_dssp             ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEE
T ss_pred             cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecc
Confidence            46789999999999999999999999999999998753

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=97.63  E-value=9.6e-05  Score=53.38  Aligned_cols=43  Identities=16%  Similarity=0.205  Sum_probs=39.6

Q ss_pred             CceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        139 PLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       139 p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      |.+.+..+++.|.|.+|+-.|+|++|.|++.++.|+|+|+++.
T Consensus         5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~   47 (100)
T 3gla_A            5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKS   47 (100)
T ss_dssp             CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECC
T ss_pred             CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcC
Confidence            6677788899999999999999999999999999999999864

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=97.60  E-value=0.00012  Score=57.57  Aligned_cols=42  Identities=14%  Similarity=0.154  Sum_probs=39.4

Q ss_pred             ceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        140 LIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       140 ~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      .+.+..+++.|.|.+|+-.|+||+|.|++.++.|+|+|++++
T Consensus        58 pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~   99 (161)
T 4eld_A           58 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSP   99 (161)
T ss_dssp             CEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCC
T ss_pred             ceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcc
Confidence            378888899999999999999999999999999999999986

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=97.49  E-value=0.00016  Score=52.82  Aligned_cols=43  Identities=16%  Similarity=0.170  Sum_probs=39.3

Q ss_pred             CceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        139 PLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       139 p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      |.+.+..+++.|.|.+|+-.|+|++|.|++.++.|+|+|+++.
T Consensus         7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~   49 (102)
T 4fei_A            7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPG   49 (102)
T ss_dssp             CCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECC
T ss_pred             CcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEec
Confidence            6677778889999999999999999999999999999999853

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=97.42  E-value=0.00021  Score=53.78  Aligned_cols=44  Identities=16%  Similarity=0.276  Sum_probs=40.2

Q ss_pred             CceeeecCCCcEEEEEEcCccCCCceEEEEeC-CEEEEEEecccc
Q psy16269        139 PLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVD-NKLLVLSTYTNS  182 (186)
Q Consensus       139 p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~-~~l~V~gkHee~  182 (186)
                      |.+.+..+++.|.|.+|+-.|+|++|.|++.+ +.|+|+|++++.
T Consensus        25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~   69 (123)
T 3aab_A           25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREIT   69 (123)
T ss_dssp             SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred             CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEecc
Confidence            66777788899999999999999999999999 999999998753

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=97.00  E-value=0.00091  Score=52.28  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=40.0

Q ss_pred             CCceeeecCCCcEEEEEEcCccCCCceEEEE-eCCEEEEEEecccc
Q psy16269        138 SPLIQEDGDNKLLKLRFDVSQYQPEEIVVKT-VDNKLLVLSTYTNS  182 (186)
Q Consensus       138 ~p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~-~~~~l~V~gkHee~  182 (186)
                      .|.+.+..+++.|.|.+|+-.|+||+|.|++ .++.|+|+|+++..
T Consensus        43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~   88 (151)
T 1gme_A           43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKE   88 (151)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccc
Confidence            3667888889999999999999999999999 57899999988753

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=95.23  E-value=0.059  Score=39.30  Aligned_cols=66  Identities=9%  Similarity=0.033  Sum_probs=54.9

Q ss_pred             eCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcc
Q psy16269         42 DGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDAL  121 (186)
Q Consensus        42 ~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L  121 (186)
                      .-..+...|.+++.+-.++++.|++.++.|.|.++..   +          .++|...+.|+..||++..+.++.. +.|
T Consensus        15 ~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~---~----------~~~y~~~~~L~~~I~~e~s~~~~~~-~~l   80 (114)
T 1rl1_A           15 YQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP---S----------GEDYNLKLELLHPIIPEQSTFKVLS-TKI   80 (114)
T ss_dssp             EECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT---T----------SSEEEEEECBSSCCCGGGEEEEECS-SSE
T ss_pred             EeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC---C----------CcEEEEEeeCCCcCCccccEEEEEC-CEE
Confidence            3367788999999999999999999999999998743   0          1468899999999999999999876 444

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=93.84  E-value=0.086  Score=36.67  Aligned_cols=61  Identities=10%  Similarity=-0.039  Sum_probs=51.6

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecC
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSS  117 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~  117 (186)
                      ..+...|.+.+.+-.++++.|.+.++.|.|.++..   +          .+.|...+.|+..||++..+.++..
T Consensus        10 t~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~----------~~~y~~~~~L~~~I~~~~s~~~~~~   70 (92)
T 2xcm_C           10 KPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---G----------EDAYYLQPRLFGKIIPDKCKYEVLS   70 (92)
T ss_dssp             ETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---T----------SCCEEECCBBSSCBCGGGCEEEECS
T ss_pred             CCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---C----------CcEEEEeeEcCCccCchhEEEEEEC
Confidence            46678899999999999999999999999998642   1          1467788899999999998888875

>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*

Probab=91.16  E-value=0.11  Score=43.26  Aligned_cols=106  Identities=14%  Similarity=0.110  Sum_probs=54.7

Q ss_pred             CCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCCcccccCCCCCCc----ccc
Q psy16269         59 PEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSNDALTAAPRPGPNT----YLD  134 (186)
Q Consensus        59 PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~~L~~a~~p~~~~----~~~  134 (186)
                      |+.++|++.++.|.|.|..-            ..++.|...+.+  .++-..|..+...+..-.-|-..+++.    .+.
T Consensus        39 P~gV~V~i~~~~VtVKGPkG------------~L~~~~~~~v~i--~~e~~~i~v~~~~~~k~~ra~~Gt~rslI~NMI~  104 (212)
T 1nkw_E           39 PSGVTVNAQDGVFKVKGPKG------------ELTVPYNTELTV--RQDGDQLLVERPSDAQKHRALHGLTRTLVANAVK  104 (212)
T ss_pred             CCCcEEEEeCCEEEEECCCE------------EEEEECCCCeEE--EEECCEEEEEcCCCCHHHHHHHHHHHHHhhCEEE
Confidence            99999999999999998643            455555432222  112222333322221100000111111    122


Q ss_pred             cCCCCce----------eeecCCCcEEEEE----EcCccCCCceEEEEeCC-EEEEEEe
Q psy16269        135 NISSPLI----------QEDGDNKLLKLRF----DVSQYQPEEIVVKTVDN-KLLVLST  178 (186)
Q Consensus       135 ~~~~p~i----------~~~~~~~~f~v~l----DV~~F~PeEI~VK~~~~-~l~V~gk  178 (186)
                      ++..++.          .+...++...+.|    ++..--|+.|+|++.++ .|+|+|-
T Consensus       105 GVt~Gf~kkLelvGvGYra~~~G~~L~L~LG~SHpv~~~iP~GI~v~v~~~t~Iiv~Gi  163 (212)
T 1nkw_E          105 GVSDGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAGVTFAVPEPTRIDVSGI  163 (212)
T ss_pred             eeccCeEEEEEEeeeeeEEEcCCCEEEEEccCCccEEEECCCCeEEEeCCCCEEEEEeC
Confidence            2222211          1223455555544    33345699999999865 8999994

>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}

Probab=81.73  E-value=0.16  Score=42.58  Aligned_cols=20  Identities=15%  Similarity=0.199  Sum_probs=17.7

Q ss_pred             CCCceEEEEECCEEEEEEEe
Q psy16269         58 QPEEIVVKTVDNKLLVSTLT   77 (186)
Q Consensus        58 ~PEEI~Vkv~~~~L~V~gkH   77 (186)
                      =|+.++|++.++.|.|.|..
T Consensus        53 IP~gV~V~i~~~~VtVKGPk   72 (223)
T 3bbo_I           53 VPSNVTIALEGQDLKVKGPL   72 (223)
T ss_dssp             CSTTSCEEESSSEEEECCSS
T ss_pred             cCCCCEEEEeCCEEEEECCC
Confidence            49999999999999998864

>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J

Probab=80.58  E-value=0.085  Score=42.70  Aligned_cols=20  Identities=20%  Similarity=0.248  Sum_probs=18.0

Q ss_pred             CCceEEEEECCEEEEEEEee
Q psy16269         59 PEEIVVKTVDNKLLVSTLTT   78 (186)
Q Consensus        59 PEEI~Vkv~~~~L~V~gkHe   78 (186)
                      |+.++|++.++.|.|.|..-
T Consensus        11 P~gV~V~i~~~~VtVkGpkG   30 (177)
T 1rl6_A           11 PAGVTVTVNGNTVTVKGPKG   30 (177)
T ss_dssp             CTTCEEEEETTEEEEEETTE
T ss_pred             CCCCEEEEeCCEEEEECCCe
Confidence            89999999999999999644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	186
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	99.2
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	99.06
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	96.14
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	95.96
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	84.05

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.20  E-value=2.4e-11  Score=93.48  Aligned_cols=83  Identities=19%  Similarity=0.140  Sum_probs=66.4

Q ss_pred             CceEeeCCCCeEEEEEeCCCcCCCceEEEEEC-CEEEEEEEeeeecccCCCCCCceeee-----eEEEEEecCCCCCCCC
Q psy16269         37 PLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVD-NKLLVSTLTTKTQIRCEPIPARRDRS-----QNRRQQTIDGNIGSSS  110 (186)
Q Consensus        37 p~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~-~~L~V~gkHeek~d~~~~~~~g~vsR-----eF~R~y~LP~~VD~~~  110 (186)
                      |.+.+..+++.|.|.+++.+|.||+|+|++.+ +.|+|.|+......+.   ..++..+     .|.|+|.||++||++.
T Consensus        43 p~~dv~e~~~~~~i~~~lPG~~~edi~v~v~~~~~l~i~~~~~~~~~~~---~~~~~~~e~~~~~f~r~~~LP~~vd~~~  119 (150)
T d1gmea_          43 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDK---NDKWHRVERSSGKFVRRFRLLEDAKVEE  119 (150)
T ss_dssp             GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCT---TCEEEECCCCCCCEEEEEECSSCCCGGG
T ss_pred             CceeEEECCCEEEEEEEeCCCccCCEEEEEEEccceeEEEEEecccccc---cceeeeeeeccceEEEEEECCCCeeece
Confidence            55667778999999999999999999999986 5688999765433322   1234443     6999999999999999


Q ss_pred             ceEEecCCCcccc
Q psy16269        111 NTVTSSSNDALTA  123 (186)
Q Consensus       111 vtstls~~~~L~~  123 (186)
                      ++|++. ||.|+.
T Consensus       120 i~A~~~-nGvL~I  131 (150)
T d1gmea_         120 VKAGLE-NGVLTV  131 (150)
T ss_dssp             CEEEEE-TTEEEE
T ss_pred             eEEEEE-CCEEEE
Confidence            999995 899943

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.06  E-value=2e-10  Score=84.20  Aligned_cols=84  Identities=12%  Similarity=0.126  Sum_probs=66.7

Q ss_pred             ceEeeCCCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCC---CCceeeeeEEEEEecCCCCCCCCceEE
Q psy16269         38 LIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPI---PARRDRSQNRRQQTIDGNIGSSSNTVT  114 (186)
Q Consensus        38 ~i~~~~~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~---~~g~vsReF~R~y~LP~~VD~~~vtst  114 (186)
                      -+.+..+++.|.|.+++.+|++++|.|.+.++.|.|.|+...........   ......+.|.|+|.||.+||++.++|+
T Consensus        12 pvdi~e~~~~~~i~~~lPG~~~edi~v~v~~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~A~   91 (115)
T d1shsa_          12 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAK   91 (115)
T ss_dssp             CEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBCGGGCEEE
T ss_pred             ceEEEEcCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEeccccccccccEEEEeeecccceEEEEecCCceeecceEEE
Confidence            35666789999999999999999999999999999999875433221110   001234689999999999999999999


Q ss_pred             ecCCCccc
Q psy16269        115 SSSNDALT  122 (186)
Q Consensus       115 ls~~~~L~  122 (186)
                      +. ||.|+
T Consensus        92 ~~-nGvL~   98 (115)
T d1shsa_          92 FE-NGVLS   98 (115)
T ss_dssp             EE-TTEEE
T ss_pred             EE-CCEEE
Confidence            95 79983

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.14  E-value=0.0052  Score=43.45  Aligned_cols=42  Identities=14%  Similarity=0.154  Sum_probs=37.9

Q ss_pred             ceeeecCCCcEEEEEEcCccCCCceEEEEeCCEEEEEEeccc
Q psy16269        140 LIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDNKLLVLSTYTN  181 (186)
Q Consensus       140 ~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~~l~V~gkHee  181 (186)
                      .+.+..+++.|.|.+++-.|++++|.|.+.++.|+|.|+...
T Consensus        12 pvdi~e~~~~~~i~~~lPG~~~edi~v~v~~~~l~I~~~~~~   53 (115)
T d1shsa_          12 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSP   53 (115)
T ss_dssp             CEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCC
T ss_pred             ceEEEEcCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEecc
Confidence            367778899999999999999999999999999999998643

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=95.96  E-value=0.0057  Score=45.50  Aligned_cols=42  Identities=19%  Similarity=0.187  Sum_probs=36.0

Q ss_pred             CceeeecCCCcEEEEEEcCccCCCceEEEEeCC-EEEEEEecc
Q psy16269        139 PLIQEDGDNKLLKLRFDVSQYQPEEIVVKTVDN-KLLVLSTYT  180 (186)
Q Consensus       139 p~i~~~~~~~~f~v~lDV~~F~PeEI~VK~~~~-~l~V~gkHe  180 (186)
                      |.+.+..+++.|.|.+++-.|+|++|.|++.++ .|+|.|+..
T Consensus        43 p~~dv~e~~~~~~i~~~lPG~~~edi~v~v~~~~~l~i~~~~~   85 (150)
T d1gmea_          43 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERT   85 (150)
T ss_dssp             GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCC
T ss_pred             CceeEEECCCEEEEEEEeCCCccCCEEEEEEEccceeEEEEEe
Confidence            556778889999999999999999999999864 678888654

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.05  E-value=1.1  Score=29.30  Aligned_cols=63  Identities=10%  Similarity=0.057  Sum_probs=51.3

Q ss_pred             CCCeEEEEEeCCCcCCCceEEEEECCEEEEEEEeeeecccCCCCCCceeeeeEEEEEecCCCCCCCCceEEecCCC
Q psy16269         44 DNKLLKLRFDVSQYQPEEIVVKTVDNKLLVSTLTTKTQIRCEPIPARRDRSQNRRQQTIDGNIGSSSNTVTSSSND  119 (186)
Q Consensus        44 ~~~kF~V~lDV~~F~PEEI~Vkv~~~~L~V~gkHeek~d~~~~~~~g~vsReF~R~y~LP~~VD~~~vtstls~~~  119 (186)
                      +.+.-.|.+.+....+++|.|+...+.|.|..+-..             .++|.-...|...|+|+..+.++....
T Consensus        10 t~~~V~i~i~~~~~~~~~v~v~~~~~~l~v~~~~~~-------------~~~y~~~~~L~~~I~p~~s~~~~~~~k   72 (92)
T d1rl1a_          10 TESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS-------------GEDYNLKLELLHPIIPEQSTFKVLSTK   72 (92)
T ss_dssp             CSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT-------------SSEEEEEECBSSCCCGGGEEEEECSSS
T ss_pred             CCCEEEEEEEeCCCChHheEEEEecCEEEEEEEcCC-------------CcEEEEEEEcCcccCchhcEEEEeCCE
Confidence            466778899999999999999999999999875320             145677789999999999888887643