Psyllid ID: psy1634


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFPPKLKRYNDIGSL
cccccHHHHcHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHccccccEcccccEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccEEccccccHHHHcccccccc
MLFLGAAFYHKYWNYMytahmpapirtyvdshmnCEDIAMNFLVAHItakapikvtprkkfkcpqcknsellssdTKHMIERSKCVSLFAEIygeggikgsplrsvefradpvlfrdnfppklkryndigsl
MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKapikvtprkkfkcpqcknsellssdtkhmIERSKCVSLFAEIYgeggikgsplrsvefradpvlfrdnfppklkryndigsl
MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFPPKLKRYNDIGSL
*LFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCKN**LL***TKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNF*************
MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTP************************RSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFPPKLKRYN*****
MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFPPKLKRYNDIGSL
MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFPPKLKRYN*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFPPKLKRYNDIGSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query132 2.2.26 [Sep-21-2011]
Q9Y169717 Exostosin-2 OS=Drosophila yes N/A 0.962 0.177 0.689 1e-50
P70428718 Exostosin-2 OS=Mus muscul yes N/A 0.962 0.176 0.606 3e-43
Q93063718 Exostosin-2 OS=Homo sapie yes N/A 0.962 0.176 0.606 4e-43
O77783718 Exostosin-2 OS=Bos taurus yes N/A 0.962 0.176 0.606 4e-43
O43909919 Exostosin-like 3 OS=Homo no N/A 0.856 0.122 0.508 2e-28
Q9WVL6918 Exostosin-like 3 OS=Mus m no N/A 0.856 0.123 0.508 2e-28
O01705814 Exostosin-2 OS=Caenorhabd yes N/A 0.856 0.138 0.475 3e-25
Q9XZ08972 Exostosin-3 OS=Drosophila no N/A 0.856 0.116 0.508 3e-25
Q5IGR8730 Exostosin-1a OS=Danio rer no N/A 0.962 0.173 0.417 3e-23
Q5IGR6737 Exostosin-1c OS=Danio rer no N/A 0.939 0.168 0.366 4e-22
>sp|Q9Y169|EXT2_DROME Exostosin-2 OS=Drosophila melanogaster GN=Ext2 PE=1 SV=1 Back     alignment and function desciption
 Score =  197 bits (502), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/132 (68%), Positives = 106/132 (80%), Gaps = 5/132 (3%)

Query: 1   MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKK 60
           M+  GAAF+HKYW++MYT  MP  I+ +VD HMNCEDIAMNFLVA+IT   PIKVTPRKK
Sbjct: 591 MVLTGAAFHHKYWSHMYTHAMPGDIKDWVDEHMNCEDIAMNFLVANITNNPPIKVTPRKK 650

Query: 61  FKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFP 120
           FKCP+C N+E+LS+D  HM ERS C+  F++IYG       PLR+VEFRADPVLFRDNFP
Sbjct: 651 FKCPECTNTEMLSADLNHMRERSACIDRFSKIYGR-----MPLRTVEFRADPVLFRDNFP 705

Query: 121 PKLKRYNDIGSL 132
            KLKRYNDIGSL
Sbjct: 706 DKLKRYNDIGSL 717




Glycosyltransferase required for the biosynthesis of heparan-sulfate and responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains. Plays a central role in diffusion of morphogens hedgehog (hh), wingless (wg) and Decapentaplegic (dpp) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis, HSPGs being required for movement of Hh, Dpp and wg morphogens.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 2EC: 5
>sp|P70428|EXT2_MOUSE Exostosin-2 OS=Mus musculus GN=Ext2 PE=1 SV=2 Back     alignment and function description
>sp|Q93063|EXT2_HUMAN Exostosin-2 OS=Homo sapiens GN=EXT2 PE=1 SV=1 Back     alignment and function description
>sp|O77783|EXT2_BOVIN Exostosin-2 OS=Bos taurus GN=EXT2 PE=1 SV=1 Back     alignment and function description
>sp|O43909|EXTL3_HUMAN Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=2 SV=1 Back     alignment and function description
>sp|Q9WVL6|EXTL3_MOUSE Exostosin-like 3 OS=Mus musculus GN=Extl3 PE=2 SV=2 Back     alignment and function description
>sp|O01705|EXT2_CAEEL Exostosin-2 OS=Caenorhabditis elegans GN=rib-2 PE=2 SV=2 Back     alignment and function description
>sp|Q9XZ08|EXT3_DROME Exostosin-3 OS=Drosophila melanogaster GN=botv PE=1 SV=1 Back     alignment and function description
>sp|Q5IGR8|EXT1A_DANRE Exostosin-1a OS=Danio rerio GN=ext1a PE=2 SV=1 Back     alignment and function description
>sp|Q5IGR6|EXT1C_DANRE Exostosin-1c OS=Danio rerio GN=ext1c PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query132
307215037 594 Exostosin-2 [Harpegnathos saltator] 0.962 0.213 0.674 1e-49
383847805 707 PREDICTED: exostosin-2-like [Megachile r 0.962 0.179 0.674 2e-49
157110617 711 exostosin-2 [Aedes aegypti] gi|108878646 0.962 0.178 0.689 2e-49
350423159 708 PREDICTED: exostosin-2-like [Bombus impa 0.962 0.179 0.674 3e-49
340727245 710 PREDICTED: exostosin-2-like isoform 2 [B 0.962 0.178 0.674 3e-49
340727243 708 PREDICTED: exostosin-2-like isoform 1 [B 0.962 0.179 0.674 3e-49
328788198 708 PREDICTED: exostosin-2 [Apis mellifera] 0.962 0.179 0.666 3e-49
347963135 761 AGAP000081-PA [Anopheles gambiae str. PE 0.962 0.166 0.666 4e-49
322790909 676 hypothetical protein SINV_11283 [Solenop 0.962 0.187 0.666 6e-49
242020116 696 Exostosin-2, putative [Pediculus humanus 0.962 0.182 0.681 7e-49
>gi|307215037|gb|EFN89864.1| Exostosin-2 [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  200 bits (509), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/132 (67%), Positives = 109/132 (82%), Gaps = 5/132 (3%)

Query: 1   MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKK 60
           M+  GAAF+HKYWNYMYT  MP  I+ +VD HMNCEDIAMNFLVA+IT KAPIKVTP+KK
Sbjct: 468 MVLTGAAFHHKYWNYMYTTAMPGDIKEWVDEHMNCEDIAMNFLVANITGKAPIKVTPKKK 527

Query: 61  FKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFP 120
           F+CP+C N+E+LS+D  HM+ER++C++ F+ IYG       PL+SVEFRADPVLF+D FP
Sbjct: 528 FRCPECTNTEMLSADLTHMVERTQCINKFSSIYG-----TMPLKSVEFRADPVLFKDVFP 582

Query: 121 PKLKRYNDIGSL 132
            KLKR+NDIGSL
Sbjct: 583 EKLKRFNDIGSL 594




Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847805|ref|XP_003699543.1| PREDICTED: exostosin-2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|157110617|ref|XP_001651176.1| exostosin-2 [Aedes aegypti] gi|108878646|gb|EAT42871.1| AAEL005626-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|350423159|ref|XP_003493402.1| PREDICTED: exostosin-2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340727245|ref|XP_003401958.1| PREDICTED: exostosin-2-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|340727243|ref|XP_003401957.1| PREDICTED: exostosin-2-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|328788198|ref|XP_001121972.2| PREDICTED: exostosin-2 [Apis mellifera] Back     alignment and taxonomy information
>gi|347963135|ref|XP_311070.5| AGAP000081-PA [Anopheles gambiae str. PEST] gi|333467342|gb|EAA06302.6| AGAP000081-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|322790909|gb|EFZ15575.1| hypothetical protein SINV_11283 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|242020116|ref|XP_002430502.1| Exostosin-2, putative [Pediculus humanus corporis] gi|212515659|gb|EEB17764.1| Exostosin-2, putative [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query132
FB|FBgn0029175717 Ext2 "Ext2" [Drosophila melano 0.962 0.177 0.689 1.4e-46
ZFIN|ZDB-GENE-041124-3719 ext2 "exostoses (multiple) 2" 0.962 0.176 0.621 5e-41
UNIPROTKB|A0JN91718 EXT2 "Exostoses (Multiple) 2" 0.962 0.176 0.606 6.3e-40
UNIPROTKB|O77783718 EXT2 "Exostosin-2" [Bos taurus 0.962 0.176 0.606 6.3e-40
UNIPROTKB|Q93063718 EXT2 "Exostosin-2" [Homo sapie 0.962 0.176 0.606 6.3e-40
MGI|MGI:108050718 Ext2 "exostoses (multiple) 2" 0.962 0.176 0.606 6.3e-40
UNIPROTKB|E9PTT2718 Ext2 "Protein Ext2" [Rattus no 0.962 0.176 0.606 6.3e-40
UNIPROTKB|F1SHI1728 EXT2 "Uncharacterized protein" 0.962 0.174 0.606 6.7e-40
UNIPROTKB|E2RKC6733 EXT2 "Uncharacterized protein" 0.962 0.173 0.606 7e-40
UNIPROTKB|F1NR24719 EXT2 "Uncharacterized protein" 0.962 0.176 0.598 1.4e-39
FB|FBgn0029175 Ext2 "Ext2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 490 (177.5 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 91/132 (68%), Positives = 106/132 (80%)

Query:     1 MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKK 60
             M+  GAAF+HKYW++MYT  MP  I+ +VD HMNCEDIAMNFLVA+IT   PIKVTPRKK
Sbjct:   591 MVLTGAAFHHKYWSHMYTHAMPGDIKDWVDEHMNCEDIAMNFLVANITNNPPIKVTPRKK 650

Query:    61 FKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFRDNFP 120
             FKCP+C N+E+LS+D  HM ERS C+  F++IYG       PLR+VEFRADPVLFRDNFP
Sbjct:   651 FKCPECTNTEMLSADLNHMRERSACIDRFSKIYGR-----MPLRTVEFRADPVLFRDNFP 705

Query:   121 PKLKRYNDIGSL 132
              KLKRYNDIGSL
Sbjct:   706 DKLKRYNDIGSL 717




GO:0008375 "acetylglucosaminyltransferase activity" evidence=ISS;NAS
GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IDA;NAS
GO:0015020 "glucuronosyltransferase activity" evidence=NAS
GO:0015014 "heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process" evidence=IMP
GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA
GO:0008101 "decapentaplegic signaling pathway" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0007224 "smoothened signaling pathway" evidence=IMP
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP
GO:0016055 "Wnt receptor signaling pathway" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0030210 "heparin biosynthetic process" evidence=IMP
GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IMP
GO:0050508 "glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity" evidence=ISS
GO:0006044 "N-acetylglucosamine metabolic process" evidence=ISS
GO:0050509 "N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity" evidence=ISS
ZFIN|ZDB-GENE-041124-3 ext2 "exostoses (multiple) 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN91 EXT2 "Exostoses (Multiple) 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O77783 EXT2 "Exostosin-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q93063 EXT2 "Exostosin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:108050 Ext2 "exostoses (multiple) 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTT2 Ext2 "Protein Ext2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1SHI1 EXT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RKC6 EXT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NR24 EXT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P70428EXT2_MOUSE2, ., 4, ., 1, ., 2, 2, 50.60600.96210.1768yesN/A
Q9Y169EXT2_DROME2, ., 4, ., 1, ., 2, 2, 50.68930.96210.1771yesN/A
Q93063EXT2_HUMAN2, ., 4, ., 1, ., 2, 2, 50.60600.96210.1768yesN/A
O77783EXT2_BOVIN2, ., 4, ., 1, ., 2, 2, 50.60600.96210.1768yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query132
pfam09258244 pfam09258, Glyco_transf_64, Glycosyl transferase f 1e-47
>gnl|CDD|220155 pfam09258, Glyco_transf_64, Glycosyl transferase family 64 domain Back     alignment and domain information
 Score =  152 bits (387), Expect = 1e-47
 Identities = 58/115 (50%), Positives = 75/115 (65%), Gaps = 6/115 (5%)

Query: 1   MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKK 60
           M+  GAAFYH+Y+ Y+YT  +P  IR  VD   NCEDI MNFLVA++T K PIKVT RK+
Sbjct: 136 MVLTGAAFYHRYYLYLYTHSLPKSIRDLVDETRNCEDILMNFLVANVTGKPPIKVTSRKQ 195

Query: 61  FKCPQCKNSELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLF 115
           +K  +      LSSD  H ++RSKC++ F++I+G       PL     RADPVLF
Sbjct: 196 YKEGRN-GKVGLSSDPGHFLQRSKCINKFSKIFG-----YMPLVYSYIRADPVLF 244


Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. Length = 244

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 132
PF09258247 Glyco_transf_64: Glycosyl transferase family 64 do 100.0
KOG2264|consensus907 100.0
KOG1022|consensus691 100.0
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans Back     alignment and domain information
Probab=100.00  E-value=5.9e-48  Score=309.99  Aligned_cols=110  Identities=61%  Similarity=1.040  Sum_probs=88.8

Q ss_pred             CcccchhhhhhhhHHhhhccCcHhHHHHhccCCChHHHHHHHHHHHHhCCCCeeecCCccccCCCCC--CCCCCCCCCcc
Q psy1634           1 MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFKCPQCK--NSELLSSDTKH   78 (132)
Q Consensus         1 mVLT~aAF~Hr~Yl~~Yt~~lp~~ir~~VD~~~NCEDIaMNFlVa~~T~~pPi~V~~~~~~~~~~~~--~~~giS~~~~H   78 (132)
                      ||||||||+|++||++|++.+|+++|++||+++||||||||||||++||+|||+|++++.+++..+.  +..|||++++|
T Consensus       136 mvLt~aaf~h~~yl~~Y~~~~p~~~r~~Vd~~~NCEDI~mNflvs~~T~~pPi~v~~~~~~~~~~~~~~~~~gls~~~~H  215 (247)
T PF09258_consen  136 MVLTGAAFYHRYYLELYTHWLPASIREYVDEHFNCEDIAMNFLVSNLTGKPPIKVTSRKKFKCSKCSGGGSSGLSSRPGH  215 (247)
T ss_dssp             EE-TTEEEEETHHHHHHHT-S-HHHHHHHHHHTS-HHHHHHHHHHHHHSS-SE--SSEEE-TTSSSS------CCCSTCH
T ss_pred             hhhhhhHhhcchHHHHHhcCcHHHHHHHHhccCCHHHHHHHHHHHHhccCCCCcccccceeeccccccccccCCCCCchh
Confidence            8999999999999999999999999999999999999999999999999999999999999876643  36799999999


Q ss_pred             hHHHHHHHHHHHHHHcCCCCCCCCccceeeeeCCccc
Q psy1634          79 MIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLF  115 (132)
Q Consensus        79 ~~~R~~Cln~f~~~fG~~~~~~mPL~~s~~r~dp~l~  115 (132)
                      +.+|++|||+|+++||     +|||++|++|+|||||
T Consensus       216 ~~~R~~Cln~f~~~fG-----~mPL~~s~~r~d~~l~  247 (247)
T PF09258_consen  216 FKQRSKCLNRFAEIFG-----YMPLVYSQFRADPVLF  247 (247)
T ss_dssp             HHHHHHHHHHHHHHTT-----S-----B-EEEEETTC
T ss_pred             HHHHHHHHHHHHHHHC-----CCCceeEeEEecCCcC
Confidence            9999999999999999     9999999999999998



They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.

>KOG2264|consensus Back     alignment and domain information
>KOG1022|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query132
1omx_A293 Crystal Structure Of Mouse Alpha-1,4-N- Acetylhexos 2e-07
>pdb|1OMX|A Chain A, Crystal Structure Of Mouse Alpha-1,4-N- Acetylhexosaminyltransferase (Extl2) Length = 293 Back     alignment and structure

Iteration: 1

Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 8/106 (7%) Query: 1 MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAK-APIKVTPRK 59 M+ +GA+F++ + ++ PA + +D NC+DIAMNFLV T K + I V P Sbjct: 174 MVLIGASFFNSKYLELFQKQ-PAAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVKPIN 232 Query: 60 KFKCPQCKNS-ELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLR 104 + N + +H ++RS C++ IY G PL+ Sbjct: 233 MVNLEKETNGYSGMWHRAEHFLQRSYCINKLVNIY-----DGMPLK 273

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query132
1omz_A293 Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro 1e-36
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* Length = 293 Back     alignment and structure
 Score =  125 bits (315), Expect = 1e-36
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 1   MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPI-KVTPRK 59
           M+ +GA+F++  +  ++    PA +   +D   NC+DIAMNFLV   T K     V P  
Sbjct: 174 MVLIGASFFNSKYLELFQ-KQPAAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVKPIN 232

Query: 60  KFKCPQCKN-SELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFR 116
                +  N    +    +H ++RS C++    IY      G PL+          F 
Sbjct: 233 MVNLEKETNGYSGMWHRAEHFLQRSYCINKLVNIYD-----GMPLKYSNIMISQFGFP 285


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query132
1omz_A293 Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro 100.0
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-43  Score=289.07  Aligned_cols=109  Identities=29%  Similarity=0.577  Sum_probs=88.8

Q ss_pred             CcccchhhhhhhhHHhhhccCcHhHHHHhccCCChHHHHHHHHHHHHhCCCC-eeecCC--ccccCCCCCCCCCCCCCCc
Q psy1634           1 MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAP-IKVTPR--KKFKCPQCKNSELLSSDTK   77 (132)
Q Consensus         1 mVLT~aAF~Hr~Yl~~Yt~~lp~~ir~~VD~~~NCEDIaMNFlVa~~T~~pP-i~V~~~--~~~~~~~~~~~~giS~~~~   77 (132)
                      ||||||||+||+|+++|+ .+|+++|++||+++||||||||||||++||+|| ++|++.  +.+. ...+...|||++++
T Consensus       174 mVLTgaAF~Hr~Yl~lyt-~~p~~ir~~VDe~~NCEDIaMNFlVA~~T~~pP~i~vk~~~~~~~~-~~~~~~~gis~~~~  251 (293)
T 1omz_A          174 MVLIGASFFNSKYLELFQ-KQPAAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVKPINMVNLE-KETNGYSGMWHRAE  251 (293)
T ss_dssp             EECTTEEEEETHHHHHHH-TSCHHHHHHHHHHTCCHHHHHHHHHHHHHSSCSEEEECCSSEEECC-------------CH
T ss_pred             EEECchHHhccHHHHHHH-HhHHHHHHHHhccCchHHHHHHHHHHHHhCCCCcceeccccccccc-cccccccCCCCCcc
Confidence            899999999999999998 599999999999999999999999999999998 777753  1221 11223579999999


Q ss_pred             chHHHHHHHHHHHHHHcCCCCCCCCccceeeeeCCcccC
Q psy1634          78 HMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFR  116 (132)
Q Consensus        78 H~~~R~~Cln~f~~~fG~~~~~~mPL~~s~~r~dp~l~k  116 (132)
                      |+.+|++|||+|+++||     +|||++|++|+||.-|-
T Consensus       252 H~~~R~~Cln~f~~~fG-----~mPL~~s~~r~d~~~~~  285 (293)
T 1omz_A          252 HFLQRSYCINKLVNIYD-----GMPLKYSNIMISQFGFP  285 (293)
T ss_dssp             HHHHHHHHHHHHHHHHT-----SCCCCCBCEEEEETTBS
T ss_pred             hhHHHHHHHHHHHHHHC-----CCCCeeeEEeecCCCCc
Confidence            99999999999999999     99999999999997664




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 132
d1omza_265 c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf 4e-11
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]
 Score = 56.2 bits (134), Expect = 4e-11
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 1   MLFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAP-IKVTPRK 59
           M+ +GA+F++  +  ++    PA +   +D   NC+DIAMNFLV   T K   I V P  
Sbjct: 149 MVLIGASFFNSKYLELFQ-KQPAAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVKPIN 207

Query: 60  KFKCPQCKNS-ELLSSDTKHMIERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLF 115
                +  N    +    +H ++RS C++    IY      G PL+          F
Sbjct: 208 MVNLEKETNGYSGMWHRAEHFLQRSYCINKLVNIYD-----GMPLKYSNIMISQFGF 259


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query132
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.36
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.36  E-value=6.1e-13  Score=94.44  Aligned_cols=109  Identities=25%  Similarity=0.468  Sum_probs=80.8

Q ss_pred             cccchhhhhhhhHHhhhccCcHhHHHHhccCCChHHHHHHHHHHHHhCCCCeeecCCcccc-CC-CCCCCCCCCCCCcch
Q psy1634           2 LFLGAAFYHKYWNYMYTAHMPAPIRTYVDSHMNCEDIAMNFLVAHITAKAPIKVTPRKKFK-CP-QCKNSELLSSDTKHM   79 (132)
Q Consensus         2 VLT~aAF~Hr~Yl~~Yt~~lp~~ir~~VD~~~NCEDIaMNFlVa~~T~~pPi~V~~~~~~~-~~-~~~~~~giS~~~~H~   79 (132)
                      ++++++|+|+.++..+.... .....+.++...|+|+.|.+......+.+.+.......+. .. ...+..++|.+.+|+
T Consensus       150 ~~~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (265)
T d1omza_         150 VLIGASFFNSKYLELFQKQP-AAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVKPINMVNLEKETNGYSGMWHRAEHF  228 (265)
T ss_dssp             ECTTEEEEETHHHHHHHTSC-HHHHHHHHHHTCCHHHHHHHHHHHHHSSCSEEEECCSSEEECC------------CHHH
T ss_pred             eccceeEecHHHHHHHhhhH-HHHhhhhhhhcchHHHHHHHHHHHhcCCceeeeeccEEEEEeeeccccccccccCccHH
Confidence            45678899999999887554 5688899999999999999999999999876543322221 11 123456899999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCccceeeeeCCcccC
Q psy1634          80 IERSKCVSLFAEIYGEGGIKGSPLRSVEFRADPVLFR  116 (132)
Q Consensus        80 ~~R~~Cln~f~~~fG~~~~~~mPL~~s~~r~dp~l~k  116 (132)
                      .+|+.|||.|+++||     +|||++|++++.+-.|.
T Consensus       229 ~~r~~~i~~f~~~f~-----~mPL~~s~i~~~~f~fp  260 (265)
T d1omza_         229 LQRSYCINKLVNIYD-----GMPLKYSNIMISQFGFP  260 (265)
T ss_dssp             HHHHHHHHHHHHHHT-----SCCCCCBCEEEEETTBS
T ss_pred             HHHHHHHHHHHHHHC-----cCcHHHHHHHHHHhCCc
Confidence            999999999999999     99999999998776654