Psyllid ID: psy16369

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MTSSVVNVFFKGNRYLVETSTSYSRPRHYPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPMLM
Secondary Structure (PSIPRED)
cccccEEEEEEccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEcccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MTSSVVNVFFKGNRYLVetstsysrprhypltdmrenekpgidsfgkpdshgdpedvkKNQAKIYSVALkfggipagetngmrgYMLTFVIAYIRIVPMLM
Flexible Loop (DISEMBL)
mtssvvnvffkgnrylvetstsysrprhypltdmrenekpgIDSFGKPDSHGDPEDVKKNQAKIYSVALKFggipagetngmrgYMLTFVIAYIRIVPMLM
Low Complexity Region (SEG)
MTSSVVNVFFKGNRYLVETSTSYSRPRHYPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPMLM
Disordered region (IsUnstruct)
****VVNVFFKGNRYLVET*******************************************KIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVP***
Disordered Region (DISOPRED)
***SVVNVFFKGNRYLVETSTSYSRPRHYPLT*****************************AKIYSVALKFGGIPAG*TNGMRGYMLTFVIAYIRIVPMLM
Disordered Region (DISEMBL)
MTSSVVNVFFKGNRYLVETSTSYSRPRHYPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPMLM
Disordered Region (DISPRO)
**SSVVNVFFKGNRYLVETSTSYSRPRHYPLTDMR*N**PGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPMLM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTSSVVNVFFKGNRYLVETSTSYSRPRHYPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPMLM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
Q9V778	631	Alkyldihydroxyacetonephos	yes	N/A	0.435	0.069	0.636	7e-10
O00116	658	Alkyldihydroxyacetonephos	yes	N/A	0.435	0.066	0.590	1e-09
Q8C0I1	645	Alkyldihydroxyacetonephos	yes	N/A	0.435	0.068	0.590	1e-09
P97275	658	Alkyldihydroxyacetonephos	yes	N/A	0.435	0.066	0.568	3e-09
Q9EQR2	644	Alkyldihydroxyacetonephos	yes	N/A	0.435	0.068	0.568	3e-09
O45218	597	Alkyldihydroxyacetonephos	yes	N/A	0.475	0.080	0.395	0.0005

>sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 34/44 (77%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD +DV++ +A IY +A KF G PAG  NG RGY+LTFVIAYIR
Sbjct: 424 GDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIR 467

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 6

>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 515

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct: 459 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 502

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 515

Cavia porcellus (taxid: 10141)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 458 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 501

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 31/48 (64%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPM 99
           G+ E+V +++ ++  +A +F G+  G  NG  GY LTF IAY+R + M
Sbjct: 401 GNREEVDQHEERLNKLAEQFHGVVGGAENGQYGYRLTFAIAYLRDLGM 448

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
270012218	600	hypothetical protein TcasGA2_TC006332 [T	0.445	0.075	0.688	8e-11
332024393	526	Alkyldihydroxyacetonephosphate synthase	0.405	0.077	0.707	1e-09
443705728	617	hypothetical protein CAPTEDRAFT_222474 [	0.435	0.071	0.659	1e-09
156395157	609	predicted protein [Nematostella vectensi	0.435	0.072	0.659	3e-09
195151474	596	GL11706 [Drosophila persimilis] gi|19411	0.435	0.073	0.659	7e-09
327284179	634	PREDICTED: alkyldihydroxyacetonephosphat	0.435	0.069	0.636	8e-09
198459696	641	GA24243 [Drosophila pseudoobscura pseudo	0.435	0.068	0.659	8e-09
307206571	407	Alkyldihydroxyacetonephosphate synthase	0.396	0.098	0.7	8e-09
449506760	621	PREDICTED: alkyldihydroxyacetonephosphat	0.435	0.070	0.613	8e-09
449266228	572	Alkyldihydroxyacetonephosphate synthase,	0.435	0.076	0.613	8e-09

>gi|270012218|gb|EFA08666.1| hypothetical protein TcasGA2_TC006332 [Tribolium castaneum]

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 37/45 (82%)

Query: 51  HGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
            G+  DVK  + KIYS+ L+FGG+PAG+TNG RGYMLTFVIAYIR
Sbjct: 410 EGEEADVKAQEKKIYSIGLQFGGMPAGQTNGERGYMLTFVIAYIR 454

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024393|gb|EGI64591.1| Alkyldihydroxyacetonephosphate synthase [Acromyrmex echinatior]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/41 (70%), Positives = 33/41 (80%)

Query: 55  EDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           ED+   + KIY +A K+GGIPAGE NG RGYMLTFVIAYIR
Sbjct: 337 EDIAAQERKIYKIANKYGGIPAGEANGERGYMLTFVIAYIR 377

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443705728|gb|ELU02126.1| hypothetical protein CAPTEDRAFT_222474 [Capitella teleta]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           G  EDV   + K+Y +A KFGG+P GE NG+RGYMLTFVIAYIR
Sbjct: 425 GSKEDVLAQEKKVYEIASKFGGLPGGEENGLRGYMLTFVIAYIR 468

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|156395157|ref|XP_001636978.1| predicted protein [Nematostella vectensis] gi|156224086|gb|EDO44915.1| predicted protein [Nematostella vectensis]

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 33/44 (75%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           G P +V   Q +IY +A KF GIPAGE NG RGYMLTFVIAY+R
Sbjct: 423 GTPSEVAIQQKRIYELAAKFNGIPAGEENGKRGYMLTFVIAYLR 466

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|195151474|ref|XP_002016672.1| GL11706 [Drosophila persimilis] gi|194110519|gb|EDW32562.1| GL11706 [Drosophila persimilis]

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD +DVK+ +A IY +A KF G PAG  NG RGY+LTFVIAYIR
Sbjct: 386 GDLKDVKRQEAIIYEIAAKFKGFPAGGQNGERGYILTFVIAYIR 429

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|327284179|ref|XP_003226816.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal-like [Anolis carolinensis]

 Score = 64.7 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGYMLTFVIAYIR
Sbjct: 448 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYMLTFVIAYIR 491

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198459696|ref|XP_002138726.1| GA24243 [Drosophila pseudoobscura pseudoobscura] gi|198136778|gb|EDY69284.1| GA24243 [Drosophila pseudoobscura pseudoobscura]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD +DVK+ +A IY +A KF G PAG  NG RGY+LTFVIAYIR
Sbjct: 425 GDLKDVKRQEAIIYEIAAKFKGFPAGGQNGERGYILTFVIAYIR 468

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206571|gb|EFN84573.1| Alkyldihydroxyacetonephosphate synthase [Harpegnathos saltator]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/40 (70%), Positives = 32/40 (80%)

Query: 56  DVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           DV   + KIYS+  K+GG+PAGETNG RGYMLTFVI YIR
Sbjct: 219 DVTVQERKIYSIVEKYGGVPAGETNGERGYMLTFVIGYIR 258

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449506760|ref|XP_002196918.2| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal [Taeniopygia guttata]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGYMLTFVIAY+R
Sbjct: 435 GDREKVLQHEKQVYDIATKFGGLAAGEDNGQRGYMLTFVIAYLR 478

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449266228|gb|EMC77307.1| Alkyldihydroxyacetonephosphate synthase, peroxisomal, partial [Columba livia]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGYMLTFVIAY+R
Sbjct: 386 GDREKVLQHEKQVYDIATKFGGLAAGEDNGQRGYMLTFVIAYLR 429

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
UNIPROTKB|I3LM15	646	AGPS "Uncharacterized protein"	0.435	0.068	0.590	1.4e-10
UNIPROTKB|F1P5J7	638	AGPS "Uncharacterized protein"	0.435	0.068	0.613	1.2e-09
UNIPROTKB|E1BPV2	576	AGPS "Uncharacterized protein"	0.435	0.076	0.590	2.8e-09
MGI|MGI:2443065	645	Agps "alkylglycerone phosphate	0.435	0.068	0.590	3.3e-09
UNIPROTKB|E2QVV9	653	AGPS "Uncharacterized protein"	0.435	0.067	0.590	3.4e-09
UNIPROTKB|O00116	658	AGPS "Alkyldihydroxyacetonepho	0.435	0.066	0.590	3.4e-09
UNIPROTKB|F6Y1U6	663	AGPS "Uncharacterized protein"	0.435	0.066	0.590	3.5e-09
UNIPROTKB|J9NZ69	699	AGPS "Uncharacterized protein"	0.435	0.062	0.590	3.7e-09
ZFIN|ZDB-GENE-031118-14	629	agps "alkylglycerone phosphate	0.475	0.076	0.562	5.3e-09
FB|FBgn0033983	631	CG10253 [Drosophila melanogast	0.435	0.069	0.636	6.8e-09

UNIPROTKB|I3LM15 AGPS "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 146 (56.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   500 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 543

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

UNIPROTKB|F1P5J7 AGPS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 27/44 (61%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGYMLTFVIAY+R
Sbjct:   452 GDREKVLQHEKQVYDIATKFGGLAAGEDNGQRGYMLTFVIAYLR 495

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

UNIPROTKB|E1BPV2 AGPS "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 146 (56.5 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   390 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 433

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

MGI|MGI:2443065 Agps "alkylglycerone phosphate synthase" [Mus musculus (taxid:10090)]

 Score = 146 (56.5 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   459 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 502

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=ISO

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|E2QVV9 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 146 (56.5 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   467 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 510

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|O00116 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 515

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISS;TAS

GO:0071949 "FAD binding" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0008610 "lipid biosynthetic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F6Y1U6 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 146 (56.5 bits), Expect = 3.5e-09, P = 3.5e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   477 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 520

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|J9NZ69 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 146 (56.5 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct:   473 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 516

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

ZFIN|ZDB-GENE-031118-14 agps "alkylglycerone phosphate synthase" [Danio rerio (taxid:7955)]

 Score = 144 (55.7 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 27/48 (56%), Positives = 36/48 (75%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPM 99
             GD   V +++ ++Y +A KFGG+ AGE NG RGYMLTFVIAY+R + M
Sbjct:   443 GDRGKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYMLTFVIAYLRDLGM 490

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

FB|FBgn0033983 CG10253 [Drosophila melanogaster (taxid:7227)]

 Score = 143 (55.4 bits), Expect = 6.8e-09, P = 6.8e-09
 Identities = 28/44 (63%), Positives = 34/44 (77%)

Query:    52 GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
             GD +DV++ +A IY +A KF G PAG  NG RGY+LTFVIAYIR
Sbjct:   424 GDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIR 467

GO:0008611 "ether lipid biosynthetic process" evidence=ISS

GO:0005777 "peroxisome" evidence=ISS

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA;ISS

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9EQR2	ADAS_RAT	2, ., 5, ., 1, ., 2, 6	0.5681	0.4356	0.0683	yes	N/A
O00116	ADAS_HUMAN	2, ., 5, ., 1, ., 2, 6	0.5909	0.4356	0.0668	yes	N/A
P97275	ADAS_CAVPO	2, ., 5, ., 1, ., 2, 6	0.5681	0.4356	0.0668	yes	N/A
Q9V778	ADAS_DROME	2, ., 5, ., 1, ., 2, 6	0.6363	0.4356	0.0697	yes	N/A
Q8C0I1	ADAS_MOUSE	2, ., 5, ., 1, ., 2, 6	0.5909	0.4356	0.0682	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
KOG1233|consensus	613		99.54
PF02913	248	FAD-oxidase_C: FAD linked oxidases, C-terminal dom	95.64
TIGR00387	413	glcD glycolate oxidase, subunit GlcD. This protein	95.34
PRK11230	499	glycolate oxidase subunit GlcD; Provisional	89.55

>KOG1233|consensus

Probab=99.54  E-value=1.8e-15  Score=128.24  Aligned_cols=72  Identities=36%  Similarity=0.523  Sum_probs=68.0

Q ss_pred             ccchhccccCCCCCCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccCCcccccccccccccccccCCCCCC
Q psy16369         28 HYPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPML  100 (101)
Q Consensus        28 ~~~l~~~~~~~~~~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~lG~~~G~~W~~~RF~~PYLRD~lL~  100 (101)
                      |.|+|..++ |++++.|.+++.|||+.++|+++++++++|+.+++|+++|+++|+++|.++|+++||||+.|.
T Consensus       404 k~YiTswKG-fd~nqicaATllfEGdre~V~qhE~~~y~iAekF~G~~aG~~NGqrGY~LTfvIAYiRDlgl~  475 (613)
T KOG1233|consen  404 KMYITSWKG-FDVNQICAATLLFEGDREEVDQHEERLYKIAEKFHGVVAGAENGQRGYRLTFVIAYIRDLGLN  475 (613)
T ss_pred             hheeecccC-cCHhhhhhhhheecccHHHHHHHHHHHHHHHHHhCCccccccccccceEEEEeHHHHHhhccc
Confidence            457777666 999999999999999999999999999999999999999999999999999999999999885

>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage

Probab=95.64  E-value=0.0075  Score=43.39  Aligned_cols=62  Identities=18%  Similarity=0.212  Sum_probs=45.8

Q ss_pred             CCCCCCceEEEEeecCChHH-HHHHHH-HHHHHHHhcCCcc-----CCcccccccccccccccccCCCC
Q psy16369         37 NEKPGIDSFGKPDSHGDPED-VKKNQA-KIYSVALKFGGIP-----AGETNGMRGYMLTFVIAYIRIVP   98 (101)
Q Consensus        37 ~~~~~~~CL~vlgFEGt~~~-V~~r~~-~~~~I~~~~GG~~-----lG~~~G~~W~~~RF~~PYLRD~l   98 (101)
                      ++.....|++++.|||++++ ++.+.+ .+.++++++++..     -.++..+-|..-++..|++++..
T Consensus        53 ~~~~~~~~~llv~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~~~~~~~~~W~~R~~~~~~~~~~~  121 (248)
T PF02913_consen   53 PLPPEGGAVLLVEFEGSDEEAVEEQLEAEIEEICKKYGGEDVVIADDEEEQERLWAIRRAIMPYLRDAA  121 (248)
T ss_dssp             TSSTTTSEEEEEECCCHHHCCHHHHHHHHHHHHHCTCTCCEEEEEHCHHCTSTHHHHHHHHCCGGGCSH
T ss_pred             CccCCcccEEEEEECCCcHHHHHHHHHHHHHHHHhhcCCceeEEeCCHHHHHhhhhhhhhhcccccccc
Confidence            46777899999999999854 555555 6778888888775     12344677888888888888764

The region around the histidine that binds the FAD group is conserved in these enzymes (see IPR006093 from INTERPRO).; GO: 0003824 catalytic activity, 0050660 flavin adenine dinucleotide binding; PDB: 1WVE_B 1DII_B 1WVF_A 1DIQ_A 2UUU_B 2UUV_A 1W1M_A 1E8H_B 1E0Y_B 1DZN_B ....

>TIGR00387 glcD glycolate oxidase, subunit GlcD

Probab=95.34  E-value=0.012  Score=48.18  Aligned_cols=59  Identities=14%  Similarity=0.051  Sum_probs=47.0

Q ss_pred             CCCCCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccC----C-cccccccccccccccccCC
Q psy16369         38 EKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPA----G-ETNGMRGYMLTFVIAYIRI   96 (101)
Q Consensus        38 ~~~~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~l----G-~~~G~~W~~~RF~~PYLRD   96 (101)
                      ++....|++++.|||.+++++.+.+++.++++++|+...    + ++..+-|...++..|++++
T Consensus       226 ~p~~~~~~l~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~r~~~~~~~~~  289 (413)
T TIGR00387       226 LPKDAGAILLVEIDGVHEAVERDEEKIEQICRKNGAVDVQIAQDEEERALLWAGRRNAFKAASK  289 (413)
T ss_pred             CCCCCceEEEEEecCCcHHHHHHHHHHHHHHHhCCCceEEEeCCHHHHHHHHHHHHHhHHHHHh
Confidence            444567999999999999999999999999999988643    1 2455668887888888875

This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.

>PRK11230 glycolate oxidase subunit GlcD; Provisional

Probab=89.55  E-value=0.31  Score=41.46  Aligned_cols=59  Identities=10%  Similarity=-0.030  Sum_probs=42.1

Q ss_pred             CCCCCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccCCc-----ccccccccccccccccCC
Q psy16369         38 EKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGE-----TNGMRGYMLTFVIAYIRI   96 (101)
Q Consensus        38 ~~~~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~lG~-----~~G~~W~~~RF~~PYLRD   96 (101)
                      +..+..+++++.++|++++|+.+.+++.++++++|+....-     +..+.|..-+...|+++.
T Consensus       283 ~p~~~~~~ll~e~~g~~~~v~~~~~~l~~~~~~~g~~~~~~a~~~~~~~~~W~~R~~~~~~~~~  346 (499)
T PRK11230        283 YPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGR  346 (499)
T ss_pred             CCCCcceEEEEEecCCchHHHHHHHHHHHHHHhcCCceEEEeCCHHHHHHHHHHHHhhHHHHHh
Confidence            44455689999999999999999999999999999754421     223456553344566654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	101
4bca_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		2e-10
4bc7_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		2e-10
4bby_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		2e-10

>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 515

>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 515

>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 515

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
2uuu_A	584	Alkyldihydroxyacetonephosphate synthase; transfera	2e-06

>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 8/45 (17%), Positives = 16/45 (35%)

Query: 51  HGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
            G  + V  ++  ++ +  K      G   G       + + YIR
Sbjct: 400 EGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIR 444

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
2uuu_A	584	Alkyldihydroxyacetonephosphate synthase; transfera	98.05
4bby_A	658	Alkyldihydroxyacetonephosphate synthase, peroxiso;	97.85
1e8g_A	560	Vanillyl-alcohol oxidase; oxidoreductase, flavoenz	92.4
1f0x_A	571	DLDH, D-lactate dehydrogenase; oxidoreductase; HET	90.39

>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*

Probab=98.05  E-value=9.5e-07  Score=74.18  Aligned_cols=69  Identities=14%  Similarity=0.083  Sum_probs=60.5

Q ss_pred             cchhccccCCCCCCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccCCcccccccccccccccccCCCC
Q psy16369         29 YPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVP   98 (101)
Q Consensus        29 ~~l~~~~~~~~~~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~lG~~~G~~W~~~RF~~PYLRD~l   98 (101)
                      .|+..+++ ++++..|++++.|||++++|+.+.+++.++++++||...+++.++.|+..|+..||+|+.+
T Consensus       379 ~~~~~~~~-~~~~~~~~llve~~g~~~~v~~~~~~~~~~~~~~g~~~~~~~~~~lW~~r~~~~~~l~~~~  447 (584)
T 2uuu_A          379 KYLHYIRS-FDFKNVCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFL  447 (584)
T ss_dssp             HHHHHTTT-SCTTTCEEEEEEEEECHHHHHHHHHHHHHHHHTTTCEEEEEESTTHHHHGGGGHHHHHHHH
T ss_pred             HhhhhccC-CCCCccEEEEEEEecChHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHhhhchHHHHhhh
Confidence            45554444 7767789999999999999999999999999999999888899999999999999999863

>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*

Probab=97.85  E-value=2.2e-06  Score=72.34  Aligned_cols=70  Identities=40%  Similarity=0.701  Sum_probs=59.6

Q ss_pred             cchhccccCCCCCCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccCCcccccccccccccccccCCCCC
Q psy16369         29 YPLTDMRENEKPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPM   99 (101)
Q Consensus        29 ~~l~~~~~~~~~~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~lG~~~G~~W~~~RF~~PYLRD~lL   99 (101)
                      .++..+.+ ++++..|++++.|||+.+.|..+.+.+.++++++||+..++.+++.|+..||..||+||..+
T Consensus       450 ~~l~~~~g-~~~~~~~~~~~~~eg~~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (658)
T 4bby_A          450 FYITKFKG-FDPNQLSVATLLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGL  519 (658)
T ss_dssp             -------C-CCTTTCEEEEEEEEECHHHHHHHHHHHHHHHHTTTCEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcc-CChHHHHHHHHHhcccHHHHHHHHHHHHHHHHhhCcchhhhhHHHHHHHHhhHHHHHHhhcc
Confidence            45556655 89999999999999999999999999999999999999999999999999999999998643

>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*

Probab=92.40  E-value=0.1  Score=43.02  Aligned_cols=54  Identities=7%  Similarity=-0.266  Sum_probs=41.4

Q ss_pred             CceEEEEeecCChHHHHHHHHHHHHHHHhcCCccC--Cccc--ccccccccccc----cccCC
Q psy16369         42 IDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPA--GETN--GMRGYMLTFVI----AYIRI   96 (101)
Q Consensus        42 ~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~l--G~~~--G~~W~~~RF~~----PYLRD   96 (101)
                      ..|++++.++|+++.|+.+.+++.++++++||...  .+.+  .+.|+. |...    |++++
T Consensus       349 ~~~~l~~e~~g~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~-R~~~~~~~p~~~~  410 (560)
T 1e8g_A          349 GRWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRV-RDKTMQGIPTYDE  410 (560)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHH-HHHHTTTCCCCGG
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHH-HHhhcccCchhhh
Confidence            46899999999999999999999999999998644  3333  345665 7654    77664

>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1

Probab=90.39  E-value=0.033  Score=46.81  Aligned_cols=56  Identities=13%  Similarity=0.058  Sum_probs=40.8

Q ss_pred             CCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccC--Cccccccccccccccc----ccCCCC
Q psy16369         41 GIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPA--GETNGMRGYMLTFVIA----YIRIVP   98 (101)
Q Consensus        41 ~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~l--G~~~G~~W~~~RF~~P----YLRD~l   98 (101)
                      ...+.+++-|+|+.++.  .++.+.+++++++|...  .++.+++|+..||++|    ++|+..
T Consensus       387 ~~~~~llve~~g~~~~~--~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~  448 (571)
T 1f0x_A          387 KYEHHLLLKMAGDGVGE--AKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVH  448 (571)
T ss_dssp             HCSEEEEEEECTTHHHH--HHHHHHHHHHHSSCEEEECCHHHHHHHHHHHTTHHHHHHHHHHHT
T ss_pred             cCceEEEEEEecCcHHH--HHHHHHHHHHHcCCCeeecCccHHHHHHHHhhhhhhHHHHhhhcc
Confidence            35689999999987543  25566678888766544  5678888888999997    777643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1wvfa1	279	Flavoprotein subunit of p-cresol methylhydroxylase	95.91
d1e8ga1	287	Vanillyl-alcohol oxidase {Fungus (Penicillium simp	91.4

>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]

Probab=95.91  E-value=0.0016  Score=46.59  Aligned_cols=60  Identities=13%  Similarity=-0.121  Sum_probs=43.3

Q ss_pred             CCCCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccC---Cc-cccccccccc---ccccccCCCC
Q psy16369         39 KPGIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPA---GE-TNGMRGYMLT---FVIAYIRIVP   98 (101)
Q Consensus        39 ~~~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~l---G~-~~G~~W~~~R---F~~PYLRD~l   98 (101)
                      .....|.+++.++|+++.|+.+.+++.++++++||..+   .. +..+.|+..|   +..|.+++..
T Consensus        74 ~~~~~w~l~~~l~G~~~~v~~~~~~i~~i~~~~~~~~~~~a~~~~~~~~~~~~r~~~~~~~~~~~~~  140 (279)
T d1wvfa1          74 TGMGAWNLYAALYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFG  140 (279)
T ss_dssp             HCCCSEEEEEEEEESHHHHHHHHHHHHHHHHHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGG
T ss_pred             hCCCceeEEEEeecCHHHHHHHHHHHHHHHHHCCCceEEeCCCHHHHHHHHHHHHhhhhhhhhhhhh
Confidence            34458899999999999999999999999999999764   12 2223343322   5667766543

>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Vanillyl-alcohol oxidase
species: Fungus (Penicillium simplicissimum) [TaxId: 69488]

Probab=91.40  E-value=0.054  Score=38.13  Aligned_cols=36  Identities=8%  Similarity=-0.281  Sum_probs=32.4

Q ss_pred             CCceEEEEeecCChHHHHHHHHHHHHHHHhcCCccC
Q psy16369         41 GIDSFGKPDSHGDPEDVKKNQAKIYSVALKFGGIPA   76 (101)
Q Consensus        41 ~~~CL~vlgFEGt~~~V~~r~~~~~~I~~~~GG~~l   76 (101)
                      ...+.+...++|+++.|+.+.+.+.++++++||...
T Consensus        75 ~~~~~~~~~l~G~~~~v~~~~~~i~~~~~~~~~~~~  110 (287)
T d1e8ga1          75 LGRWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKF  110 (287)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHHHHHHHTTSTTCEE
T ss_pred             cchhheeeecccCHHHHHHHHHHHHHHHHHcCCcEE
Confidence            347889999999999999999999999999999754