Psyllid ID: psy16407

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------6
Protein Sequence
MNDTLNPRSLLTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEEEEccccEEEEcEEEEEEEcccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEEccccccEEEEEEEEc
Coil and Loop (DISEMBL)
mndtlnprslltnpdcrlfdshylvkyshrragatfqgkvynflerpsgwkcfvYHFAV
Flexible Loop (DISEMBL)
mndtlnprslltnpdcrLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV
Low Complexity Region (SEG)
MNDTLNPRSLLTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV
Disordered region (IsUnstruct)
**********LTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFA*
Disordered Region (DISOPRED)
**********************************TFQGKVYNFLERPSGWKCFVYHFAV
Disordered Region (DISEMBL)
MNDTLNPRSLLTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV
Disordered Region (DISPRO)
**DTLNPRSLLTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNDTLNPRSLLTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	59	2.2.26 [Sep-21-2011]
P51787	676	Potassium voltage-gated c	yes	N/A	0.559	0.048	0.722	8e-09
P97414	668	Potassium voltage-gated c	yes	N/A	0.559	0.049	0.694	2e-08
Q9Z0N7	669	Potassium voltage-gated c	yes	N/A	0.559	0.049	0.694	2e-08
P70057	377	Potassium voltage-gated c	N/A	N/A	0.559	0.087	0.666	4e-08
O73925	660	Potassium voltage-gated c	N/A	N/A	0.389	0.034	0.782	7e-07

>sp|P51787|KCNQ1_HUMAN Potassium voltage-gated channel subfamily KQT member 1 OS=Homo sapiens GN=KCNQ1 PE=1 SV=3

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 28/36 (77%), Gaps = 3/36 (8%)

Query: 27  YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
           YS RR   A    QG+VYNFLERP+GWKCFVYHFAV
Sbjct: 94  YSTRRPVLARTHVQGRVYNFLERPTGWKCFVYHFAV 129

Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current. Muscarinic agonist oxotremorine-M strongly suppresses KCNQ1/KCNE1 current in CHO cells in which cloned KCNQ1/KCNE1 channels were coexpressed with M1 muscarinic receptors. May associate also with KCNE3 (MiRP2) to form the potassium channel that is important for cyclic AMP-stimulated intestinal secretion of chloride ions, which is reduced in cystic fibrosis and pathologically stimulated in cholera and other forms of secretory diarrhea.
Homo sapiens (taxid: 9606)

>sp|P97414|KCNQ1_MOUSE Potassium voltage-gated channel subfamily KQT member 1 OS=Mus musculus GN=Kcnq1 PE=2 SV=3

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/36 (69%), Positives = 27/36 (75%), Gaps = 3/36 (8%)

Query: 27  YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
           YS RR   A    QG+VYNFLERP+GWKCFVYHF V
Sbjct: 93  YSARRPLLARTHIQGRVYNFLERPTGWKCFVYHFTV 128

Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current.

Mus musculus (taxid: 10090)

>sp|Q9Z0N7|KCNQ1_RAT Potassium voltage-gated channel subfamily KQT member 1 OS=Rattus norvegicus GN=Kcnq1 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/36 (69%), Positives = 27/36 (75%), Gaps = 3/36 (8%)

Query: 27  YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
           YS RR   A    QG+VYNFLERP+GWKCFVYHF V
Sbjct: 94  YSTRRPLLARTHIQGRVYNFLERPTGWKCFVYHFTV 129

Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current.

Rattus norvegicus (taxid: 10116)

>sp|P70057|KCNQ1_XENLA Potassium voltage-gated channel subfamily KQT member 1 (Fragment) OS=Xenopus laevis GN=kcnq1 PE=2 SV=1

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 3/36 (8%)

Query: 27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
          YS RR   +    QG+VYNFLERP+GWKCFVYHF V
Sbjct: 60 YSGRRPLLSRTNIQGRVYNFLERPTGWKCFVYHFTV 95

Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current.

Xenopus laevis (taxid: 8355)

>sp|O73925|KCNQ1_SQUAC Potassium voltage-gated channel subfamily KQT member 1 OS=Squalus acanthias GN=KCNQ1 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/23 (78%), Positives = 21/23 (91%)

Query: 37  QGKVYNFLERPSGWKCFVYHFAV 59
           QG+ YNFLERP+GWKCF+YHF V
Sbjct: 100 QGRTYNFLERPTGWKCFIYHFTV 122

Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current. Is also a potential candidate responsible for the basolateral potassium conductance of secretory epithelia.

Squalus acanthias (taxid: 7797)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	59
328709411	645	PREDICTED: potassium voltage-gated chann	0.983	0.089	0.567	7e-13
332027391	190	Potassium voltage-gated channel subfamil	0.966	0.3	0.619	3e-11
307168337	147	Potassium voltage-gated channel subfamil	0.966	0.387	0.619	3e-11
328783187	149	PREDICTED: potassium voltage-gated chann	0.966	0.382	0.590	3e-10
345487285	693	PREDICTED: potassium voltage-gated chann	0.677	0.057	0.714	3e-10
322784666	99	hypothetical protein SINV_07489 [Solenop	0.847	0.505	0.615	6e-09
449482379	603	PREDICTED: potassium voltage-gated chann	0.576	0.056	0.658	9e-08
443710443	614	hypothetical protein CAPTEDRAFT_111874 [	0.881	0.084	0.547	9e-08
157123233	261	hypothetical protein AaeL_AAEL009455 [Ae	0.593	0.134	0.75	1e-07
329664260	670	potassium voltage-gated channel subfamil	0.559	0.049	0.722	2e-07

>gi|328709411|ref|XP_003243953.1| PREDICTED: potassium voltage-gated channel subfamily KQT member 1-like isoform 2 [Acyrthosiphon pisum]

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 9/67 (13%)

Query: 1   MNDTLNPRSLLTNPDCRL--------FDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKC 52
           +ND L     +T+P   +        +++ YL K  HRRAGATFQGKVYNFLERPSGWKC
Sbjct: 71  VNDGLQSSCSVTDPRTLVAAERTGSSWENRYLCK-EHRRAGATFQGKVYNFLERPSGWKC 129

Query: 53  FVYHFAV 59
           FVYHF V
Sbjct: 130 FVYHFTV 136

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027391|gb|EGI67474.1| Potassium voltage-gated channel subfamily KQT member 1 [Acromyrmex echinatior]

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 6/63 (9%)

Query: 2   NDTL----NPRSLLTNPDCRLFDSHYLVKYSHRRAG-ATFQGKVYNFLERPSGWKCFVYH 56
           NDTL    +PR LL     R ++  Y VK  HRRAG ATFQG+VYNFLERP+GWKCF+YH
Sbjct: 73  NDTLVGGVDPRLLLGTGGDRAWEGRYHVK-EHRRAGKATFQGQVYNFLERPTGWKCFLYH 131

Query: 57  FAV 59
           F+V
Sbjct: 132 FSV 134

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307168337|gb|EFN61537.1| Potassium voltage-gated channel subfamily KQT member 1 [Camponotus floridanus]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 6/63 (9%)

Query: 2   NDTL----NPRSLLTNPDCRLFDSHYLVKYSHRRAG-ATFQGKVYNFLERPSGWKCFVYH 56
           NDTL    +PR LL     R ++  Y VK  HRRAG ATFQG+VYNFLERP+GWKCF+YH
Sbjct: 86  NDTLAGGVDPRLLLGTGGDRTWEGRYHVK-EHRRAGKATFQGQVYNFLERPTGWKCFLYH 144

Query: 57  FAV 59
           F+V
Sbjct: 145 FSV 147

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783187|ref|XP_003250248.1| PREDICTED: potassium voltage-gated channel subfamily KQT member 1-like [Apis mellifera]

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 9/66 (13%)

Query: 2   NDT----LNPRSLL---TNPDCRLFDSHYLVKYSHRRAG-ATFQGKVYNFLERPSGWKCF 53
           NDT    ++PR LL   T  D   ++  Y VK  HRRAG ATFQG+VYNFLERP+GWKCF
Sbjct: 85  NDTFSGGVDPRLLLGANTGGDRNTWEGRYRVK-EHRRAGKATFQGQVYNFLERPTGWKCF 143

Query: 54  VYHFAV 59
           +YHF+V
Sbjct: 144 LYHFSV 149

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487285|ref|XP_003425661.1| PREDICTED: potassium voltage-gated channel subfamily KQT member 1-like [Nasonia vitripennis]

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/42 (71%), Positives = 36/42 (85%), Gaps = 2/42 (4%)

Query: 19  FDSHYLVKYSHRRAG-ATFQGKVYNFLERPSGWKCFVYHFAV 59
           ++  Y VK  HRRAG ATFQG+VYNFLERP+GWKCF+YHF+V
Sbjct: 118 WEGRYRVK-EHRRAGKATFQGQVYNFLERPTGWKCFLYHFSV 158

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322784666|gb|EFZ11522.1| hypothetical protein SINV_07489 [Solenopsis invicta]

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 2/52 (3%)

Query: 9  SLLTNPDCRLFDSHYLVKYSHRRAG-ATFQGKVYNFLERPSGWKCFVYHFAV 59
          +L ++ +  L    Y VK  HRRAG ATFQG+VYNFLERP+GWKCF+YHF+V
Sbjct: 49 TLQSDNNDTLVGGRYNVK-EHRRAGKATFQGQVYNFLERPTGWKCFLYHFSV 99

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449482379|ref|XP_002193594.2| PREDICTED: potassium voltage-gated channel subfamily KQT member 1-like [Taeniopygia guttata]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 7/41 (17%)

Query: 19  FDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV 59
           F S YL K S        QG+VYNFLERPSGWKCF+YHFAV
Sbjct: 93  FQSQYLTKTST-------QGQVYNFLERPSGWKCFIYHFAV 126

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443710443|gb|ELU04696.1| hypothetical protein CAPTEDRAFT_111874 [Capitella teleta]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 7  PRSLLTNPDCRLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV 59
          P S   +P  + F+S YL + S      T QGKVYNFLERP+GWKCF+YHF V
Sbjct: 48 PGSGCLHPIEKNFESRYLAR-SKVPMKTTIQGKVYNFLERPTGWKCFMYHFTV 99

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|157123233|ref|XP_001660072.1| hypothetical protein AaeL_AAEL009455 [Aedes aegypti] gi|108874451|gb|EAT38676.1| AAEL009455-PA [Aedes aegypti]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 1/36 (2%)

Query: 25  VKYSHRRAG-ATFQGKVYNFLERPSGWKCFVYHFAV 59
           VK   R AG ATFQG+VYNFLERP+G+KCFVYH AV
Sbjct: 179 VKAQRRHAGRATFQGQVYNFLERPAGYKCFVYHVAV 214

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|329664260|ref|NP_001192370.1| potassium voltage-gated channel subfamily KQT member 1 [Bos taurus]

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 28/36 (77%), Gaps = 3/36 (8%)

Query: 27  YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
           YS RR   A    QG+VYNFLERP+GWKCFVYHFAV
Sbjct: 89  YSARRPLLARTHIQGRVYNFLERPTGWKCFVYHFAV 124

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	59
UNIPROTKB|E9PPZ0	193	KCNQ1 "Potassium voltage-gated	0.389	0.119	0.913	2e-08
UNIPROTKB|P51787	676	KCNQ1 "Potassium voltage-gated	0.559	0.048	0.722	8.8e-08
UNIPROTKB|F1LMY9	469	Kcnq1 "Potassium voltage-gated	0.559	0.070	0.694	1.1e-07
MGI|MGI:108083	668	Kcnq1 "potassium voltage-gated	0.559	0.049	0.694	1.8e-07
RGD|621503	669	Kcnq1 "potassium voltage-gated	0.559	0.049	0.694	1.8e-07
UNIPROTKB|F1NUF5	652	KCNQ1 "Uncharacterized protein	0.559	0.050	0.638	4.7e-07
UNIPROTKB|F1NZB1	665	KCNQ1 "Uncharacterized protein	0.559	0.049	0.638	4.9e-07
ZFIN|ZDB-GENE-061214-5	655	kcnq1 "potassium voltage-gated	0.932	0.083	0.428	6.1e-07
WB|WBGene00002235	621	kqt-3 [Caenorhabditis elegans	0.728	0.069	0.441	3.2e-06
UNIPROTKB|Q9XWG9	621	kqt-3 "Protein KQT-3, isoform	0.728	0.069	0.441	3.2e-06

UNIPROTKB|E9PPZ0 KCNQ1 "Potassium voltage-gated channel subfamily KQT member 1" [Homo sapiens (taxid:9606)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 21/23 (91%), Positives = 23/23 (100%)

Query:    37 QGKVYNFLERPSGWKCFVYHFAV 59
             QG+VYNFLERP+GWKCFVYHFAV
Sbjct:    20 QGRVYNFLERPTGWKCFVYHFAV 42

GO:0005249 "voltage-gated potassium channel activity" evidence=IEA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

UNIPROTKB|P51787 KCNQ1 "Potassium voltage-gated channel subfamily KQT member 1" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query:    27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
             YS RR   A    QG+VYNFLERP+GWKCFVYHFAV
Sbjct:    94 YSTRRPVLARTHVQGRVYNFLERPTGWKCFVYHFAV 129

GO:0005516 "calmodulin binding" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0015271 "outward rectifier potassium channel activity" evidence=IEA

GO:0016458 "gene silencing" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IEA

GO:0042383 "sarcolemma" evidence=IEA

GO:0042589 "zymogen granule membrane" evidence=IEA

GO:0046676 "negative regulation of insulin secretion" evidence=IEA

GO:0072358 "cardiovascular system development" evidence=IEA

GO:0006936 "muscle contraction" evidence=TAS

GO:0007605 "sensory perception of sound" evidence=TAS

GO:0008015 "blood circulation" evidence=NAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0005249 "voltage-gated potassium channel activity" evidence=IDA

GO:0060306 "regulation of membrane repolarization" evidence=IMP

GO:0005251 "delayed rectifier potassium channel activity" evidence=IDA

GO:0008076 "voltage-gated potassium channel complex" evidence=IC;IDA

GO:0071435 "potassium ion export" evidence=IDA

GO:0008016 "regulation of heart contraction" evidence=IC

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0005770 "late endosome" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

UNIPROTKB|F1LMY9 Kcnq1 "Potassium voltage-gated channel subfamily KQT member 1" [Rattus norvegicus (taxid:10116)]

 Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)

Query:    27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
             YS RR   A    QG+VYNFLERP+GWKCFVYHF V
Sbjct:    94 YSTRRPLLARTHIQGRVYNFLERPTGWKCFVYHFTV 129

GO:0005251 "delayed rectifier potassium channel activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0016458 "gene silencing" evidence=IEA

GO:0060306 "regulation of membrane repolarization" evidence=IEA

GO:0071435 "potassium ion export" evidence=IEA

GO:0072358 "cardiovascular system development" evidence=IEA

MGI|MGI:108083 Kcnq1 "potassium voltage-gated channel, subfamily Q, member 1" [Mus musculus (taxid:10090)]

 Score = 130 (50.8 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)

Query:    27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
             YS RR   A    QG+VYNFLERP+GWKCFVYHF V
Sbjct:    93 YSARRPLLARTHIQGRVYNFLERPTGWKCFVYHFTV 128

GO:0005216 "ion channel activity" evidence=IEA

GO:0005244 "voltage-gated ion channel activity" evidence=IEA

GO:0005249 "voltage-gated potassium channel activity" evidence=ISO

GO:0005251 "delayed rectifier potassium channel activity" evidence=IBA

GO:0005267 "potassium channel activity" evidence=ISO

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005764 "lysosome" evidence=ISO

GO:0005769 "early endosome" evidence=ISO

GO:0005770 "late endosome" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IMP

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=ISO

GO:0008076 "voltage-gated potassium channel complex" evidence=ISO

GO:0015271 "outward rectifier potassium channel activity" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0016458 "gene silencing" evidence=IMP

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0034220 "ion transmembrane transport" evidence=IEA

GO:0034765 "regulation of ion transmembrane transport" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0042391 "regulation of membrane potential" evidence=ISO

GO:0042589 "zymogen granule membrane" evidence=ISO

GO:0046676 "negative regulation of insulin secretion" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

GO:0060306 "regulation of membrane repolarization" evidence=ISO

GO:0071435 "potassium ion export" evidence=ISO

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0072358 "cardiovascular system development" evidence=IMP

RGD|621503 Kcnq1 "potassium voltage-gated channel, KQT-like subfamily, member 1" [Rattus norvegicus (taxid:10116)]

 Score = 130 (50.8 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)

Query:    27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
             YS RR   A    QG+VYNFLERP+GWKCFVYHF V
Sbjct:    94 YSTRRPLLARTHIQGRVYNFLERPTGWKCFVYHFTV 129

GO:0005249 "voltage-gated potassium channel activity" evidence=ISO

GO:0005251 "delayed rectifier potassium channel activity" evidence=ISO;IBA

GO:0005267 "potassium channel activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005764 "lysosome" evidence=IEA;ISO

GO:0005769 "early endosome" evidence=IEA;ISO

GO:0005770 "late endosome" evidence=IEA;ISO

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA;ISO

GO:0006813 "potassium ion transport" evidence=IDA

GO:0008076 "voltage-gated potassium channel complex" evidence=ISO;IDA

GO:0015271 "outward rectifier potassium channel activity" evidence=IDA

GO:0016323 "basolateral plasma membrane" evidence=ISO;IDA

GO:0016458 "gene silencing" evidence=IEA;ISO

GO:0030659 "cytoplasmic vesicle membrane" evidence=IDA

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0042383 "sarcolemma" evidence=IDA

GO:0042391 "regulation of membrane potential" evidence=IDA

GO:0042589 "zymogen granule membrane" evidence=IDA

GO:0046676 "negative regulation of insulin secretion" evidence=IDA

GO:0060306 "regulation of membrane repolarization" evidence=IEA;ISO

GO:0071435 "potassium ion export" evidence=IEA;ISO

GO:0072358 "cardiovascular system development" evidence=IEA;ISO

UNIPROTKB|F1NUF5 KCNQ1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 126 (49.4 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 23/36 (63%), Positives = 28/36 (77%)

Query:    27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
             YS R+   + +  QG+VYNFLERP+GWKCFVYHF V
Sbjct:    84 YSLRKPLLSRSNIQGRVYNFLERPTGWKCFVYHFTV 119

GO:0005249 "voltage-gated potassium channel activity" evidence=IEA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

UNIPROTKB|F1NZB1 KCNQ1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 126 (49.4 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 23/36 (63%), Positives = 28/36 (77%)

Query:    27 YSHRR---AGATFQGKVYNFLERPSGWKCFVYHFAV 59
             YS R+   + +  QG+VYNFLERP+GWKCFVYHF V
Sbjct:    97 YSLRKPLLSRSNIQGRVYNFLERPTGWKCFVYHFTV 132

GO:0005251 "delayed rectifier potassium channel activity" evidence=IBA

GO:0005764 "lysosome" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0016458 "gene silencing" evidence=IEA

GO:0060306 "regulation of membrane repolarization" evidence=IEA

GO:0071435 "potassium ion export" evidence=IEA

GO:0072358 "cardiovascular system development" evidence=IEA

ZFIN|ZDB-GENE-061214-5 kcnq1 "potassium voltage-gated channel, KQT-like subfamily, member 1" [Danio rerio (taxid:7955)]

 Score = 125 (49.1 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query:     5 LNPRSLLTNPDCRLFDSHYLVKYSHRRAGATF-QGKVYNFLERPSGWKCFVYHFAV 59
             ++P  +  +P   L     +   +      +F QG+VYNFLERP+GWKCFVYHF V
Sbjct:    42 VDPAVITQHPPSHLHPRMSVYSATRPTLSRSFLQGRVYNFLERPTGWKCFVYHFTV 97

GO:0005216 "ion channel activity" evidence=IEA

GO:0005249 "voltage-gated potassium channel activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005251 "delayed rectifier potassium channel activity" evidence=IBA

GO:0097205 "renal filtration" evidence=IMP

GO:0001822 "kidney development" evidence=IMP

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005267 "potassium channel activity" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

WB|WBGene00002235 kqt-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 118 (46.6 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 19/43 (44%), Positives = 30/43 (69%)

Query:    17 RLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV 59
             ++F++ Y      + A  T++  +YN LERP+GWKCF+YHF+V
Sbjct:    41 KMFNARYRNIKEKKAAKMTYRAMIYNCLERPTGWKCFLYHFSV 83

GO:0006813 "potassium ion transport" evidence=IEA;IDA

GO:0005249 "voltage-gated potassium channel activity" evidence=IEA

GO:0008076 "voltage-gated potassium channel complex" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007213 "G-protein coupled acetylcholine receptor signaling pathway" evidence=IDA

GO:0005267 "potassium channel activity" evidence=IDA

UNIPROTKB|Q9XWG9 kqt-3 "Protein KQT-3, isoform a" [Caenorhabditis elegans (taxid:6239)]

 Score = 118 (46.6 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 19/43 (44%), Positives = 30/43 (69%)

Query:    17 RLFDSHYLVKYSHRRAGATFQGKVYNFLERPSGWKCFVYHFAV 59
             ++F++ Y      + A  T++  +YN LERP+GWKCF+YHF+V
Sbjct:    41 KMFNARYRNIKEKKAAKMTYRAMIYNCLERPTGWKCFLYHFSV 83

GO:0005251 "delayed rectifier potassium channel activity" evidence=IBA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P97414	KCNQ1_MOUSE	No assigned EC number	0.6944	0.5593	0.0494	yes	N/A
P51787	KCNQ1_HUMAN	No assigned EC number	0.7222	0.5593	0.0488	yes	N/A
Q9Z0N7	KCNQ1_RAT	No assigned EC number	0.6944	0.5593	0.0493	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	59
KOG1419|consensus	654		99.33

>KOG1419|consensus

Probab=99.33  E-value=3.8e-14  Score=113.33  Aligned_cols=28  Identities=68%  Similarity=1.246  Sum_probs=26.1

Q ss_pred             cc-ceecceeeeeeecCCCceeeeeeeeC
Q psy16407         32 AG-ATFQGKVYNFLERPSGWKCFVYHFAV   59 (59)
Q Consensus        32 ~r-r~~Q~rvYNFLERP~Gwk~f~YH~~V   59 (59)
                      +| |++|++||||||||+|||||+|||+|
T Consensus        72 ~r~Rr~q~~vYN~LERPrGWkaf~YH~~V  100 (654)
T KOG1419|consen   72 ARYRRIQNKVYNFLERPRGWKAFLYHFFV  100 (654)
T ss_pred             HHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence            44 99999999999999999999999986

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00