Psyllid ID: psy16437

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-
MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLIERLTKNADPVCTREKAKKKKKKKKKKKKKKKKKKKKNISVDKNSINDENENKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccHHHHHccHHHHHcccEEEEccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHccccEEEEcccccccccccccccccccccccHHHHcccccccEEEEEcccHHHHHHHHHHHHHccEEccccccccHHcccccHHHHHHHccccEEEEEccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEccHHHHHHHHHHccccccccccccccHHHHHHHHHHcc
ccHHcccHHHcccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccHHHHHccHHHHHcccEEEcccccccccccccccEEEcccccccccccccccccHHHHHHHHHcccHHHHHHHHHcccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccccEEccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHcccEEEEEEccccccHHHcccccccccccccHHHHccccccEEEEcccccHHHHHHHHHHHHHccEEEEcccccHHHHccccHHHHHHHccccEEEEEEccccccccccccccHHHHHHHccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEcccccEEEEEccHHHHHHHHHHHcccHHcccccccccHHHHHHHHHHc
mckvmnlqhlaldpryltgaLRVENRELLCKEIEAKTMEKTTEEWLLIFQGVsfpyaqvnsISQVFADEHIQDIKLVKEIshekygdikivgpavaysltqpevrtpppalgehtdYVLKDLLNYDETTIAKLKEKKILGLIERLTknadpvctREKAKKKKKKKKKKKKKkkkkkkknisvdknsindenenkiSLYENFYSLDLalssenpslplsnvrildlTRIIAGPFCTMLLADLGAEVikveqpvtgdecrkwgppflnntelstyftcvnrnkksvcvdfktpeGQQIIKDLAKQCDVLvenfvpgkldrlnlgyKHLSEINSQLIYCsvtgfgskgpykdrpgydiiAASIGGllhitghpdgppckvgIASIDLATGLYAHGAVMAALLHKyktgkgqkidcnLLSTQVSMLINVGANYlnagiegkrwgtshanvvphqvfktsngyvtigtgsdkQYQDMCKVMnlqhlaldprYLTGALILAMTSHLI
mckvmnlqhlaldpryltgalRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLierltknadpvctrekakkkkkkkkkkkkkkkkkkkknisvdknsindenenkISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQpvtgdecrkwgppflnnTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAklkekkilglierlTKNADPVCTREKAkkkkkkkkkkkkkkkkkkkkNISVDKNSINDENENKISLYENFYSLDlalssenpslplsnVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
****MNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRT**PALGEHTDYVLKDLLNYDETTIAKLKEKKILGLIERLTK***********************************************ISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMT****
MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLIE***************************************************************************NVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLIERLTKNADPV****************************SVDKNSINDENENKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLIERLTKNADPVCTREKAKKKKKKKKKKKKKKKKKKKKNISVDKNSINDENENKISLYENFYSLDLAL*****SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MCKVMNLQHLALDPRYLTGALRVENRELLCKEIEAKTMEKTTEEWLLIFQGVSFPYAQVNSISQVFADEHIQDIKLVKEISHEKYGDIKIVGPAVAYSLTQPEVRTPPPALGEHTDYVLKDLLNYDETTIAKLKEKKILGLIERLTKNADPVCTxxxxxxxxxxxxxxxxxxxxxxxxxISVDKNSINDENENKISLYENFYSLDLALSSENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query501 2.2.26 [Sep-21-2011]
Q7TNE1 436 CaiB/baiF CoA-transferase yes N/A 0.548 0.630 0.570 2e-92
Q68FU4 436 CaiB/baiF CoA-transferase yes N/A 0.548 0.630 0.563 2e-92
Q9HAC7 445 CaiB/baiF CoA-transferase yes N/A 0.548 0.617 0.559 7e-91
Q55CV9 471 CaiB/baiF CoA-transferase yes N/A 0.576 0.613 0.442 7e-70
P76518381 Uncharacterized protein Y N/A N/A 0.546 0.719 0.368 4e-53
B6JE29 424 Formyl-coenzyme A transfe no N/A 0.381 0.450 0.438 2e-38
Q2IUI7 425 Formyl-coenzyme A transfe no N/A 0.377 0.444 0.438 2e-38
Q07Q82 425 Formyl-coenzyme A transfe no N/A 0.389 0.458 0.429 2e-38
Q139H7 425 Formyl-coenzyme A transfe no N/A 0.377 0.444 0.438 4e-38
Q82M40 409 Formyl-coenzyme A transfe no N/A 0.530 0.650 0.332 9e-38
>sp|Q7TNE1|CG010_MOUSE CaiB/baiF CoA-transferase family protein C7orf10 homolog OS=Mus musculus PE=2 SV=2 Back     alignment and function desciption
 Score =  340 bits (872), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 158/277 (57%), Positives = 203/277 (73%), Gaps = 2/277 (0%)

Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
           PL  VRILDLTR++AGPF TM L DLGAEVIKVE+P  GD+ R WGPPF+N    STYF 
Sbjct: 38  PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTE--STYFL 95

Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
            VNRNKKS+ V+ K P G +I+K+LA  CDV VEN+VPGKL  + LGY+ + +I   +IY
Sbjct: 96  SVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIY 155

Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
           CS+TG+G  GP   R GYD IA+++ GL+HITG  DG P + G+A  DLATGL+A+GA+M
Sbjct: 156 CSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATGLFAYGAIM 215

Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
           A LL +Y+TGKG  IDCNLLS+QV+ L  V ANYL    E KRWGT+H ++VP+Q FKT 
Sbjct: 216 AGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKTK 275

Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
           +GY+ IG G+++Q+  +CK++NL  L  D +Y T  L
Sbjct: 276 DGYLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHL 312

Mus musculus (taxid: 10090)
EC: 2EC: .EC: -EC: .EC: -EC: .EC: -
>sp|Q68FU4|CG010_RAT CaiB/baiF CoA-transferase family protein C7orf10 homolog OS=Rattus norvegicus PE=2 SV=1 Back     alignment and function description
>sp|Q9HAC7|CG010_HUMAN CaiB/baiF CoA-transferase family protein C7orf10 OS=Homo sapiens GN=C7orf10 PE=1 SV=2 Back     alignment and function description
>sp|Q55CV9|Y9880_DICDI CaiB/baiF CoA-transferase family protein DDB_G0269880 OS=Dictyostelium discoideum GN=DDB_G0269880 PE=3 SV=1 Back     alignment and function description
>sp|P76518|YFDE_ECOLI Uncharacterized protein YfdE OS=Escherichia coli (strain K12) GN=yfdE PE=3 SV=2 Back     alignment and function description
>sp|B6JE29|FCTA_OLICO Formyl-coenzyme A transferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=frc PE=3 SV=1 Back     alignment and function description
>sp|Q2IUI7|FCTA_RHOP2 Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain HaA2) GN=frc PE=3 SV=1 Back     alignment and function description
>sp|Q07Q82|FCTA_RHOP5 Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain BisA53) GN=frc PE=3 SV=1 Back     alignment and function description
>sp|Q139H7|FCTA_RHOPS Formyl-coenzyme A transferase OS=Rhodopseudomonas palustris (strain BisB5) GN=frc PE=3 SV=1 Back     alignment and function description
>sp|Q82M40|FCTA_STRAW Formyl-coenzyme A transferase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=frc PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query501
332376182429 unknown [Dendroctonus ponderosae] 0.546 0.638 0.656 1e-109
91082479457 PREDICTED: similar to formyl-coenzyme A 0.570 0.625 0.611 1e-106
312371260528 hypothetical protein AND_22328 [Anophele 0.540 0.513 0.641 1e-106
270007145508 hypothetical protein TcasGA2_TC013676 [T 0.570 0.562 0.611 1e-106
157140524432 alpha methylacyl-coa racemase [Aedes aeg 0.572 0.664 0.617 1e-105
170039875432 formyl-coenzyme A transferase [Culex qui 0.546 0.634 0.619 1e-105
194744171450 GF18334 [Drosophila ananassae] gi|190627 0.556 0.62 0.622 1e-104
383858708429 PREDICTED: caiB/baiF CoA-transferase fam 0.558 0.652 0.613 1e-104
195112827443 GI10535 [Drosophila mojavensis] gi|19391 0.542 0.613 0.620 1e-103
195449726433 GK22719 [Drosophila willistoni] gi|19416 0.542 0.628 0.616 1e-103
>gi|332376182|gb|AEE63231.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 180/274 (65%), Positives = 225/274 (82%)

Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
           PL  +RILDLTRI+AGP+CTM+L DLGAEV+K+E+P  GDE R WGPPF+ +T+ S YF 
Sbjct: 34  PLHGIRILDLTRIVAGPYCTMILGDLGAEVLKIEKPGRGDEARIWGPPFVGDTKESCYFI 93

Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
             NRNKKSVCV+ ++ EG+ I+ +LAK  D+LVEN+VPGKLD L LGY+H  EI   LIY
Sbjct: 94  TFNRNKKSVCVNIQSEEGRNILYELAKVSDILVENYVPGKLDSLQLGYEHFYEIAPHLIY 153

Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVM 395
           CS+TGFGSKGPY  RPGYD+IAASIGGLLHITG  +G PCK G+A IDL+TGLYAHGA++
Sbjct: 154 CSITGFGSKGPYSKRPGYDVIAASIGGLLHITGPENGEPCKTGVALIDLSTGLYAHGAIL 213

Query: 396 AALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTS 455
           AALL + KTGKGQKIDC+LLST++S LIN+G+NYLNAG E  RWGT+H ++VP+Q F T 
Sbjct: 214 AALLKRAKTGKGQKIDCDLLSTELSTLINIGSNYLNAGKEATRWGTAHESIVPYQAFPTQ 273

Query: 456 NGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
           +GY TIGTGSDKQ+ + C+++N + LA DP++LT
Sbjct: 274 DGYYTIGTGSDKQFVEFCRLINHKELADDPKFLT 307

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91082479|ref|XP_972168.1| PREDICTED: similar to formyl-coenzyme A transferase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|312371260|gb|EFR19493.1| hypothetical protein AND_22328 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|270007145|gb|EFA03593.1| hypothetical protein TcasGA2_TC013676 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157140524|ref|XP_001647648.1| alpha methylacyl-coa racemase [Aedes aegypti] gi|108866835|gb|EAT32316.1| AAEL015557-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170039875|ref|XP_001847745.1| formyl-coenzyme A transferase [Culex quinquefasciatus] gi|167863466|gb|EDS26849.1| formyl-coenzyme A transferase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|194744171|ref|XP_001954568.1| GF18334 [Drosophila ananassae] gi|190627605|gb|EDV43129.1| GF18334 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|383858708|ref|XP_003704841.1| PREDICTED: caiB/baiF CoA-transferase family protein C7orf10 homolog [Megachile rotundata] Back     alignment and taxonomy information
>gi|195112827|ref|XP_002000973.1| GI10535 [Drosophila mojavensis] gi|193917567|gb|EDW16434.1| GI10535 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195449726|ref|XP_002072197.1| GK22719 [Drosophila willistoni] gi|194168282|gb|EDW83183.1| GK22719 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query501
FB|FBgn0038804 441 CG10877 [Drosophila melanogast 0.534 0.607 0.6 2.1e-91
MGI|MGI:1923221 436 5033411D12Rik "RIKEN cDNA 5033 0.558 0.642 0.563 1e-84
RGD|1308114 436 RGD1308114 "similar to cDNA se 0.558 0.642 0.556 1.7e-84
UNIPROTKB|A6QQD0 438 LOC100125578 "LOC100125578 pro 0.558 0.639 0.549 2.1e-84
UNIPROTKB|F1PE55401 C7orf10 "Uncharacterized prote 0.558 0.698 0.539 5.6e-84
UNIPROTKB|Q9HAC7 445 C7orf10 "CaiB/baiF CoA-transfe 0.558 0.629 0.549 7.2e-84
UNIPROTKB|H0Y4N1421 C7orf10 "CaiB/baiF CoA-transfe 0.558 0.665 0.549 7.2e-84
UNIPROTKB|F1LXJ6329 F1LXJ6 "Uncharacterized protei 0.550 0.838 0.524 2.5e-74
ZFIN|ZDB-GENE-050913-18231 zgc:113390 "zgc:113390" [Danio 0.427 0.926 0.583 8.9e-70
TIGR_CMR|SPO_2886397 SPO_2886 "CAIB/BAIF family pro 0.538 0.680 0.467 1e-68
FB|FBgn0038804 CG10877 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
 Identities = 162/270 (60%), Positives = 219/270 (81%)

Query:   220 VRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNR 279
             +RILDL+RIIAGP+CTM+LADLGAEVIKVE+P  GDE RKWGPPFL N+  + YF   NR
Sbjct:    52 IRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNSNDAAYFLAPNR 111

Query:   280 NKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVT 339
             NK+S+C+D K   G Q++  LA+  DVLVEN+VPG L+R  LGY+ L ++N +LIYCS+T
Sbjct:   112 NKRSICIDIK--RGTQLLHRLAEISDVLVENYVPGTLERYGLGYEQLRKVNPKLIYCSMT 169

Query:   340 GFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAALL 399
             G+GS GPY  RPGYD+IA+S+GGL+HITG  DGPP KVG+A  D++TGLYAHGA++AAL 
Sbjct:   170 GYGSVGPYAKRPGYDVIASSVGGLMHITGERDGPPSKVGVAVTDMSTGLYAHGAILAALY 229

Query:   400 HKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNGYV 459
              + +T +GQKI+ +LLST  S+L+NVG+NYLN+G+E  R GT+H+++VP+Q FKT +GY+
Sbjct:   230 QRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDGYL 289

Query:   460 TIGTGSDKQYQDMCKVMNLQHLALDPRYLT 489
             T+GTGSD Q+ D+C+ + ++HLA +P++ T
Sbjct:   290 TLGTGSDVQFVDLCRRLKVEHLAQNPKFKT 319
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
MGI|MGI:1923221 5033411D12Rik "RIKEN cDNA 5033411D12 gene" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308114 RGD1308114 "similar to cDNA sequence AF397014" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A6QQD0 LOC100125578 "LOC100125578 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PE55 C7orf10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HAC7 C7orf10 "CaiB/baiF CoA-transferase family protein C7orf10" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y4N1 C7orf10 "CaiB/baiF CoA-transferase family protein C7orf10" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1LXJ6 F1LXJ6 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-18 zgc:113390 "zgc:113390" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2886 SPO_2886 "CAIB/BAIF family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q68FU4CG010_RAT2, ., -, ., -, ., -0.56310.54890.6307yesN/A
Q7TNE1CG010_MOUSE2, ., -, ., -, ., -0.57030.54890.6307yesN/A
Q9HAC7CG010_HUMAN2, ., -, ., -, ., -0.55950.54890.6179yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.8.3.16LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query501
COG1804 396 COG1804, CaiB, Predicted acyl-CoA transferases/car 1e-117
pfam02515179 pfam02515, CoA_transf_3, CoA-transferase family II 1e-75
PRK11430381 PRK11430, PRK11430, putative CoA-transferase; Prov 7e-67
PRK05398 416 PRK05398, PRK05398, formyl-coenzyme A transferase; 6e-61
TIGR03253 415 TIGR03253, oxalate_frc, formyl-CoA transferase 5e-54
COG1804396 COG1804, CaiB, Predicted acyl-CoA transferases/car 2e-30
PRK03525 405 PRK03525, PRK03525, crotonobetainyl-CoA:carnitine 3e-23
PRK05398416 PRK05398, PRK05398, formyl-coenzyme A transferase; 1e-14
TIGR03253415 TIGR03253, oxalate_frc, formyl-CoA transferase 4e-13
TIGR04253 403 TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomeras 2e-12
pfam08432182 pfam08432, DUF1742, Fungal protein of unknown func 7e-05
PRK11430381 PRK11430, PRK11430, putative CoA-transferase; Prov 1e-04
PRK11192434 PRK11192, PRK11192, ATP-dependent RNA helicase Srm 1e-04
pfam06658142 pfam06658, DUF1168, Protein of unknown function (D 1e-04
PTZ00074135 PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro 1e-04
pfam0855590 pfam08555, DUF1754, Eukaryotic family of unknown f 5e-04
PRK14552414 PRK14552, PRK14552, C/D box methylation guide ribo 6e-04
pfam0855590 pfam08555, DUF1754, Eukaryotic family of unknown f 8e-04
pfam06658142 pfam06658, DUF1168, Protein of unknown function (D 0.001
pfam09468287 pfam09468, RNase_H2-Ydr279, Ydr279p protein family 0.001
pfam06658142 pfam06658, DUF1168, Protein of unknown function (D 0.003
pfam07771120 pfam07771, TSGP1, Tick salivary peptide group 1 0.003
PRK11192434 PRK11192, PRK11192, ATP-dependent RNA helicase Srm 0.004
PTZ00074135 PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro 0.004
PTZ00074135 PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro 0.004
>gnl|CDD|224717 COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] Back     alignment and domain information 
 Score =  349 bits (897), Expect = e-117
 Identities = 136/281 (48%), Positives = 183/281 (65%), Gaps = 5/281 (1%)

Query: 213 PSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELST 272
              PL  +R++DL  ++AGPF   LLADLGAEVIKVE+P  GD+ R + P      + S 
Sbjct: 4   RKGPLEGLRVIDLAHVLAGPFAGQLLADLGAEVIKVERPGGGDDTRVFAP----VADGSA 59

Query: 273 YFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQ 332
           YF  +NR K+SV +D KT EG++I+  L    DVL+ENF PG L+RL LGY+ L  IN +
Sbjct: 60  YFLALNRGKRSVALDLKTEEGREILLRLVAGADVLIENFRPGVLERLGLGYEALRAINPR 119

Query: 333 LIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHG 392
           LIYCS++GFG  GPY DRPGYD+IA +  GL+ ITG PDGPP   G+A  DLA GLYA  
Sbjct: 120 LIYCSISGFGQTGPYADRPGYDLIAQAEAGLMSITGRPDGPPVPAGVAIADLAGGLYAAI 179

Query: 393 AVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVF 452
            ++AALLH+ +TG+GQ ID  +L   VS+L N    YL  G    R G +H  + P+ V+
Sbjct: 180 GILAALLHRERTGRGQHIDVAMLDAAVSLLANQLMTYLATGKLPLRPGGAHPAIAPYDVY 239

Query: 453 KTSNGY-VTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
           +T++G  V +G G+DK +Q +C+++    LA DPR+ T   
Sbjct: 240 RTADGKLVALGAGNDKFWQALCELLGRPELADDPRFATNHA 280

Length = 396
>gnl|CDD|217078 pfam02515, CoA_transf_3, CoA-transferase family III Back     alignment and domain information
>gnl|CDD|183132 PRK11430, PRK11430, putative CoA-transferase; Provisional Back     alignment and domain information
>gnl|CDD|180055 PRK05398, PRK05398, formyl-coenzyme A transferase; Provisional Back     alignment and domain information
>gnl|CDD|211800 TIGR03253, oxalate_frc, formyl-CoA transferase Back     alignment and domain information
>gnl|CDD|224717 COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|179589 PRK03525, PRK03525, crotonobetainyl-CoA:carnitine CoA-transferase; Provisional Back     alignment and domain information
>gnl|CDD|180055 PRK05398, PRK05398, formyl-coenzyme A transferase; Provisional Back     alignment and domain information
>gnl|CDD|211800 TIGR03253, oxalate_frc, formyl-CoA transferase Back     alignment and domain information
>gnl|CDD|211976 TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomerase Back     alignment and domain information
>gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742) Back     alignment and domain information
>gnl|CDD|183132 PRK11430, PRK11430, putative CoA-transferase; Provisional Back     alignment and domain information
>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional Back     alignment and domain information
>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168) Back     alignment and domain information
>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional Back     alignment and domain information
>gnl|CDD|219901 pfam08555, DUF1754, Eukaryotic family of unknown function (DUF1754) Back     alignment and domain information
>gnl|CDD|237753 PRK14552, PRK14552, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional Back     alignment and domain information
>gnl|CDD|219901 pfam08555, DUF1754, Eukaryotic family of unknown function (DUF1754) Back     alignment and domain information
>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168) Back     alignment and domain information
>gnl|CDD|220252 pfam09468, RNase_H2-Ydr279, Ydr279p protein family (RNase H2 complex component) Back     alignment and domain information
>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168) Back     alignment and domain information
>gnl|CDD|219564 pfam07771, TSGP1, Tick salivary peptide group 1 Back     alignment and domain information
>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional Back     alignment and domain information
>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional Back     alignment and domain information
>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 501
PRK11430381 putative CoA-transferase; Provisional 100.0
COG1804 396 CaiB Predicted acyl-CoA transferases/carnitine deh 100.0
PRK05398 416 formyl-coenzyme A transferase; Provisional 100.0
PRK03525 405 crotonobetainyl-CoA:carnitine CoA-transferase; Pro 100.0
TIGR03253 415 oxalate_frc formyl-CoA transferase. This enzyme, f 100.0
KOG3957|consensus 387 100.0
PF02515191 CoA_transf_3: CoA-transferase family III; InterPro 100.0
TIGR03253415 oxalate_frc formyl-CoA transferase. This enzyme, f 99.93
PRK05398416 formyl-coenzyme A transferase; Provisional 99.93
PRK03525405 crotonobetainyl-CoA:carnitine CoA-transferase; Pro 99.92
COG1804396 CaiB Predicted acyl-CoA transferases/carnitine deh 99.92
PRK11430381 putative CoA-transferase; Provisional 99.86
KOG3957|consensus387 99.74
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 93.82
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 92.06
PRK04148134 hypothetical protein; Provisional 86.96
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 86.29
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 85.23
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 81.66
>PRK11430 putative CoA-transferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4e-80  Score=643.30  Aligned_cols=284  Identities=36%  Similarity=0.691  Sum_probs=270.3

Q ss_pred             CCCCCCcEEEEeCCccchhHHHHHHHHcCCcEEEEecCCCCCcccccCCCCCCCCCcchhhhhhcCCceEEEEeCCChhh
Q psy16437        214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEG  293 (501)
Q Consensus       214 ~~pL~GlrVldl~~~~agp~a~~~LAdlGA~VIKVE~p~~gD~~R~~~~~~~~~~~~~~~f~~~nrgKrsv~lDl~~~~g  293 (501)
                      .+||+||||||||+++|||+|+++||||||||||||+|..||++|.++|..   .+.+.+|..+|||||||+|||++++|
T Consensus         7 ~~pL~GirVldls~~~aGP~a~~~LAdlGAeVIKVE~p~~GD~~R~~~p~~---~~~s~~f~~~NrgKrsv~lDLk~~~G   83 (381)
T PRK11430          7 KGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYV---DGQSLYYSFINHGKESVVLDLKNDHD   83 (381)
T ss_pred             CCCcCCCEEEEeCCcchHHHHHHHHHHcCCCEEEECCCCCCccccccCCCC---CCccHHHHHhCCCCeEEEecCCCHHH
Confidence            479999999999999999999999999999999999998899999997642   24688999999999999999999999


Q ss_pred             HHHHHHHHhhCCeEEEcCChhhhhhcCCCHHHHhhhCCCcEEEEEeecCCCCCCCCCCcchhHHhhhhccccccCCCCCC
Q psy16437        294 QQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP  373 (501)
Q Consensus       294 ~~~~~~Li~~ADVvi~n~~pg~l~~lGl~~~~L~~~nP~lI~~~~s~fG~~Gp~~~~~g~d~~~~A~sG~~~~~g~~~~~  373 (501)
                      |++|++||++|||||+||||++|+||||||++|+++||+||||+|||||++|||++++|||.++||+||+++++|.++++
T Consensus        84 r~~~~~L~~~ADVvien~rpg~~~rlGl~y~~L~~~nP~LI~~sisgfG~~GP~~~~pg~D~~~qA~sG~~~~~G~~~~~  163 (381)
T PRK11430         84 KSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAP  163 (381)
T ss_pred             HHHHHHHHhcCCEEEeCCCccHHHHcCCCHHHHHHHCCCceEEeeeeCCCCCCCCCCCCchHHHHHHhCHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcchhhhHHHHHHHHHHHHHHHHHhhcCCceEEEcchhhhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCeee
Q psy16437        374 PCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFK  453 (501)
Q Consensus       374 P~~~~~~~~D~~ag~~aa~a~laAL~~R~rtG~G~~vdvSl~e~~~~~~~~~~~~~~~~g~~~~r~g~~~~~~~p~~~y~  453 (501)
                      |+..+.+++|+.+|+++++||||||++|++||+||+||+||+|++++++......|...|..+.+.||.++..+||++|+
T Consensus       164 P~~~~~~~~D~~~g~~aa~ailaAL~~R~~tG~Gq~VdvSl~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~p~~~y~  243 (381)
T PRK11430        164 PVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFDVFD  243 (381)
T ss_pred             CeeccchhhHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeeHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCceE
Confidence            99999999999999999999999999999999999999999999988887777777777777778899988889999999


Q ss_pred             eCCCcEEEEeCChHHHHHHHHHcCCCCcccCCCCCCHHHHHhhhhcc
Q psy16437        454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL  500 (501)
Q Consensus       454 ~aDGwv~i~~~~~~~w~~l~~~lg~~~l~~d~~~~~~~~R~~~~~~l  500 (501)
                      |+||||+|++.++++|.+||++||++||.+||+|++...|.+|+++|
T Consensus       244 ~~DG~i~i~~~~~~~w~~l~~~lg~~~l~~d~rf~~~~~r~~~~~~l  290 (381)
T PRK11430        244 TQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAIL  290 (381)
T ss_pred             cCCCcEEEEeCCHHHHHHHHHHhCCcccccCcccCChHHHHHhHHHH
Confidence            99999999999999999999999999999999999999999998876

>COG1804 CaiB Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] Back     alignment and domain information
>PRK05398 formyl-coenzyme A transferase; Provisional Back     alignment and domain information
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional Back     alignment and domain information
>TIGR03253 oxalate_frc formyl-CoA transferase Back     alignment and domain information
>KOG3957|consensus Back     alignment and domain information
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life Back     alignment and domain information
>TIGR03253 oxalate_frc formyl-CoA transferase Back     alignment and domain information
>PRK05398 formyl-coenzyme A transferase; Provisional Back     alignment and domain information
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional Back     alignment and domain information
>COG1804 CaiB Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] Back     alignment and domain information
>PRK11430 putative CoA-transferase; Provisional Back     alignment and domain information
>KOG3957|consensus Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query501
4ed9_A385 Crystal Structure Of A CaibBAIF FAMILY PROTEIN FROM 5e-68
1p5h_A 428 Crystal Structure Of Formyl-Coa Transferase (Apoenz 3e-35
1pt5_A 437 Crystal Structure Of Gene Yfdw Of E. Coli Length = 4e-35
2vjo_A 428 Formyl-Coa Transferase Mutant Variant Q17a With Asp 4e-35
1q6y_A 428 Hypothetical Protein Yfdw From E. Coli Bound To Coe 4e-35
2vjk_A 428 Formyl-Coa Transferase With Aspartyl-Coa Thioester 6e-35
1t4c_A 427 Formyl-Coa Transferase In Complex With Oxalyl-Coa L 6e-35
2vjn_A 428 Formyl-coa Transferase Mutant Variant G260a Length 7e-35
1vgr_A 427 Formyl-Coa Transferase Mutant Asp169 To Glu Length 2e-34
1t3z_A 427 Formyl-Coa Tranferase Mutant Asp169 To Ser Length = 3e-34
1t4c_B 427 Formyl-Coa Transferase In Complex With Oxalyl-Coa L 4e-34
2vjm_B 428 Formyl-Coa Transferase With Aspartyl-Formyl Anhydid 4e-34
1vgq_A 427 Formyl-Coa Transferase Mutant Asp169 To Ala Length 5e-34
2vjp_A 428 Formyl-Coa Transferase Mutant Variant W48f Length = 5e-34
2vjq_A 428 Formyl-Coa Transferase Mutant Variant W48q Length = 2e-33
1q7e_A 428 Crystal Structure Of Yfdw Protein From E. Coli Leng 2e-31
1pqy_A 428 Crystal Structure Of Formyl-Coa Transferase Yfdw Fr 5e-31
3ubm_A 456 Formyl-Coa:oxalate Coa-Transferase From Acetobacter 5e-27
1x74_A360 Alpha-Methylacyl-Coa Racemase From Mycobacterium Tu 3e-25
2g04_A359 Crystal Structure Of Fatty Acid-Coa Racemase From M 2e-18
1xvu_A 408 Crystal Structure Of Caib Mutant D169a In Complex W 6e-11
1xk7_A 408 Crystal Structure- C2 Form- Of Escherichia Coli Cro 3e-10
1xk6_A 408 Crystal Structure- P1 Form- Of Escherichia Coli Cro 4e-10
1xa3_A 437 Crystal Structure Of Caib, A Type Iii Coa Transfera 4e-10
>pdb|4ED9|A Chain A, Crystal Structure Of A CaibBAIF FAMILY PROTEIN FROM BRUCELLA SUIS Length = 385 Back     alignment and structure 
Iteration: 1

 Score =  255 bits (651), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 120/283 (42%), Positives = 177/283 (62%), Gaps = 3/283 (1%)
Query: 220 VRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLN--NTELSTYFTCV 277
           +++++L RI+AGP+    L DLGA+VIKVE P  GD+ R WGPPF++      + YF   
Sbjct: 13  LKVVELARILAGPWVGQTLCDLGADVIKVESP-EGDDTRTWGPPFIDVEGERSAAYFHAC 71
Query: 278 NRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCS 337
           NR K+S+  DF+T EG+++++ L  + DV++ENF  G LD+  L Y+ L  IN QLIYCS
Sbjct: 72  NRGKRSITADFRTEEGRELVRRLVAEADVVIENFKLGGLDKYGLDYESLKAINPQLIYCS 131
Query: 338 VTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATGLYAHGAVMAA 397
           +TGFG  GPY +R GYD +   +GG++ +TG PD  P K+G+A  D+ TGLY+  A+ +A
Sbjct: 132 ITGFGHTGPYAERAGYDFMIQGMGGIMDLTGEPDREPQKIGVAFADIFTGLYSVIAIQSA 191
Query: 398 LLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQVFKTSNG 457
           L+ + +TGKGQ ID  L      +L N   NYL +G   KR G +H N+ P+Q    S+G
Sbjct: 192 LIMRARTGKGQHIDMALFDCMSGVLANQAMNYLASGKSPKRMGNAHPNIAPYQTLSVSDG 251
Query: 458 YVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL 500
           Y  I  G+D Q+  +  ++ +  LA D R+ T +  +A  + L
Sbjct: 252 YFIIACGNDGQFGKLSTLLGIGELAKDERFATNSARVANRAAL 294
>pdb|1P5H|A Chain A, Crystal Structure Of Formyl-Coa Transferase (Apoenzyme) From Oxalobacter Formigenes Length = 428 Back     alignment and structure
>pdb|1PT5|A Chain A, Crystal Structure Of Gene Yfdw Of E. Coli Length = 437 Back     alignment and structure
>pdb|2VJO|A Chain A, Formyl-Coa Transferase Mutant Variant Q17a With Aspartyl- Coa Thioester Intermediates And Oxalate Length = 428 Back     alignment and structure
>pdb|1Q6Y|A Chain A, Hypothetical Protein Yfdw From E. Coli Bound To Coenzyme A Length = 428 Back     alignment and structure
>pdb|2VJK|A Chain A, Formyl-Coa Transferase With Aspartyl-Coa Thioester Intermediate Derived From Oxalyl-Coa Length = 428 Back     alignment and structure
>pdb|1T4C|A Chain A, Formyl-Coa Transferase In Complex With Oxalyl-Coa Length = 427 Back     alignment and structure
>pdb|2VJN|A Chain A, Formyl-coa Transferase Mutant Variant G260a Length = 428 Back     alignment and structure
>pdb|1VGR|A Chain A, Formyl-Coa Transferase Mutant Asp169 To Glu Length = 427 Back     alignment and structure
>pdb|1T3Z|A Chain A, Formyl-Coa Tranferase Mutant Asp169 To Ser Length = 427 Back     alignment and structure
>pdb|1T4C|B Chain B, Formyl-Coa Transferase In Complex With Oxalyl-Coa Length = 427 Back     alignment and structure
>pdb|2VJM|B Chain B, Formyl-Coa Transferase With Aspartyl-Formyl Anhydide Intermediate Length = 428 Back     alignment and structure
>pdb|1VGQ|A Chain A, Formyl-Coa Transferase Mutant Asp169 To Ala Length = 427 Back     alignment and structure
>pdb|2VJP|A Chain A, Formyl-Coa Transferase Mutant Variant W48f Length = 428 Back     alignment and structure
>pdb|2VJQ|A Chain A, Formyl-Coa Transferase Mutant Variant W48q Length = 428 Back     alignment and structure
>pdb|1Q7E|A Chain A, Crystal Structure Of Yfdw Protein From E. Coli Length = 428 Back     alignment and structure
>pdb|1PQY|A Chain A, Crystal Structure Of Formyl-Coa Transferase Yfdw From E. Coli Length = 428 Back     alignment and structure
>pdb|3UBM|A Chain A, Formyl-Coa:oxalate Coa-Transferase From Acetobacter Aceti Length = 456 Back     alignment and structure
>pdb|1X74|A Chain A, Alpha-Methylacyl-Coa Racemase From Mycobacterium Tuberculosis- Mutational And Structural Characterization Of The Fold And Active Site Length = 360 Back     alignment and structure
>pdb|2G04|A Chain A, Crystal Structure Of Fatty Acid-Coa Racemase From Mycobacterium Tuberculosis H37rv Length = 359 Back     alignment and structure
>pdb|1XVU|A Chain A, Crystal Structure Of Caib Mutant D169a In Complex With Coenzyme A Length = 408 Back     alignment and structure
>pdb|1XK7|A Chain A, Crystal Structure- C2 Form- Of Escherichia Coli Crotonobetainyl-coa: Carnitine Coa Transferase (caib) Length = 408 Back     alignment and structure
>pdb|1XK6|A Chain A, Crystal Structure- P1 Form- Of Escherichia Coli Crotonobetainyl-Coa: Carnitine Coa Transferase (Caib) Length = 408 Back     alignment and structure
>pdb|1XA3|A Chain A, Crystal Structure Of Caib, A Type Iii Coa Transferase In Carnitine Metabolism Length = 437 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query501
4ed9_A385 CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI 1e-169
4ed9_A385 CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI 2e-38
1q7e_A 428 Hypothetical protein YFDW; structural genomics, in 1e-154
1q7e_A428 Hypothetical protein YFDW; structural genomics, in 8e-43
3ubm_A 456 COAT2, formyl-COA:oxalate COA-transferase; HET: CO 1e-150
3ubm_A456 COAT2, formyl-COA:oxalate COA-transferase; HET: CO 1e-41
2vjq_A 428 Formyl-coenzyme A transferase; class III COA trans 1e-148
2vjq_A428 Formyl-coenzyme A transferase; class III COA trans 2e-42
1xk7_A 408 Crotonobetainyl-COA:carnitine COA-transferase; CAI 1e-146
1xk7_A408 Crotonobetainyl-COA:carnitine COA-transferase; CAI 2e-37
2yim_A360 Probable alpha-methylacyl-COA racemase MCR (2-meth 1e-102
2yim_A360 Probable alpha-methylacyl-COA racemase MCR (2-meth 1e-17
2g04_A359 Probable fatty-acid-COA racemase FAR; isomerase; 2 3e-99
2g04_A359 Probable fatty-acid-COA racemase FAR; isomerase; 2 4e-19
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis} Length = 385 Back     alignment and structure
 Score =  481 bits (1241), Expect = e-169
 Identities = 120/285 (42%), Positives = 176/285 (61%), Gaps = 3/285 (1%)

Query: 210 SENPSLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN-- 267
               + PL  +++++L RI+AGP+    L DLGA+VIKVE P  GD+ R WGPPF++   
Sbjct: 3   GSMQNTPLDGLKVVELARILAGPWVGQTLCDLGADVIKVESP-EGDDTRTWGPPFIDVEG 61

Query: 268 TELSTYFTCVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLS 327
              + YF   NR K+S+  DF+T EG+++++ L  + DV++ENF  G LD+  L Y+ L 
Sbjct: 62  ERSAAYFHACNRGKRSITADFRTEEGRELVRRLVAEADVVIENFKLGGLDKYGLDYESLK 121

Query: 328 EINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG 387
            IN QLIYCS+TGFG  GPY +R GYD +   +GG++ +TG PD  P K+G+A  D+ TG
Sbjct: 122 AINPQLIYCSITGFGHTGPYAERAGYDFMIQGMGGIMDLTGEPDREPQKIGVAFADIFTG 181

Query: 388 LYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVV 447
           LY+  A+ +AL+ + +TGKGQ ID  L      +L N   NYL +G   KR G +H N+ 
Sbjct: 182 LYSVIAIQSALIMRARTGKGQHIDMALFDCMSGVLANQAMNYLASGKSPKRMGNAHPNIA 241

Query: 448 PHQVFKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGAL 492
           P+Q    S+GY  I  G+D Q+  +  ++ +  LA D R+ T + 
Sbjct: 242 PYQTLSVSDGYFIIACGNDGQFGKLSTLLGIGELAKDERFATNSA 286
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis} Length = 385 Back     alignment and structure
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A* Length = 428 Back     alignment and structure
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A* Length = 428 Back     alignment and structure
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti} Length = 456 Back     alignment and structure
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti} Length = 456 Back     alignment and structure
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A* Length = 428 Back     alignment and structure
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A* Length = 428 Back     alignment and structure
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A* Length = 408 Back     alignment and structure
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A* Length = 408 Back     alignment and structure
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A* Length = 360 Back     alignment and structure
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A* Length = 360 Back     alignment and structure
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis} Length = 359 Back     alignment and structure
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis} Length = 359 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query501
4ed9_A385 CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI 100.0
1q7e_A 428 Hypothetical protein YFDW; structural genomics, in 100.0
3ubm_A 456 COAT2, formyl-COA:oxalate COA-transferase; HET: CO 100.0
2vjq_A 428 Formyl-coenzyme A transferase; class III COA trans 100.0
2yim_A360 Probable alpha-methylacyl-COA racemase MCR (2-meth 100.0
1xk7_A 408 Crotonobetainyl-COA:carnitine COA-transferase; CAI 100.0
2g04_A359 Probable fatty-acid-COA racemase FAR; isomerase; 2 100.0
1q7e_A428 Hypothetical protein YFDW; structural genomics, in 99.95
3ubm_A456 COAT2, formyl-COA:oxalate COA-transferase; HET: CO 99.95
2vjq_A428 Formyl-coenzyme A transferase; class III COA trans 99.95
1xk7_A408 Crotonobetainyl-COA:carnitine COA-transferase; CAI 99.93
4ed9_A385 CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI 99.9
2yim_A360 Probable alpha-methylacyl-COA racemase MCR (2-meth 99.81
2g04_A359 Probable fatty-acid-COA racemase FAR; isomerase; 2 99.78
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 92.91
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 90.95
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 88.77
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 86.18
3h9u_A436 Adenosylhomocysteinase; NAD CO-factor complex, str 86.09
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 83.93
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 81.4
3n58_A464 Adenosylhomocysteinase; ssgcid, hydrolase, structu 80.26
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis} Back     alignment and structure
Probab=100.00  E-value=7.8e-84  Score=669.96  Aligned_cols=286  Identities=43%  Similarity=0.815  Sum_probs=272.4

Q ss_pred             CCCCCCcEEEEeCCccchhHHHHHHHHcCCcEEEEecCCCCCcccccCCCCCCC--CCcchhhhhhcCCceEEEEeCCCh
Q psy16437        214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNN--TELSTYFTCVNRNKKSVCVDFKTP  291 (501)
Q Consensus       214 ~~pL~GlrVldl~~~~agp~a~~~LAdlGA~VIKVE~p~~gD~~R~~~~~~~~~--~~~~~~f~~~nrgKrsv~lDl~~~  291 (501)
                      .+||+||||||||+++|||+||++||||||||||||+|. ||++|.+++++...  ...|.+|..+|||||||+||||+|
T Consensus         7 ~~pL~GirVldls~~~aGP~a~~~LAdlGAdVIKVE~p~-GD~~R~~~~~~~~~~~~~~s~~f~~~Nr~KrSi~LDLk~~   85 (385)
T 4ed9_A            7 NTPLDGLKVVELARILAGPWVGQTLCDLGADVIKVESPE-GDDTRTWGPPFIDVEGERSAAYFHACNRGKRSITADFRTE   85 (385)
T ss_dssp             CCTTTTCEEEECCCTTHHHHHHHHHHHTTCEEEEEECTT-CCGGGGSCSSEEEETTEEEEHHHHTTCTTCEEEECCTTSH
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHcCCcEEEEcCCC-CCcccccCCccccCccccccHHHHHhCCCCeEEEecCCCH
Confidence            479999999999999999999999999999999999998 99999998754321  114889999999999999999999


Q ss_pred             hhHHHHHHHHhhCCeEEEcCChhhhhhcCCCHHHHhhhCCCcEEEEEeecCCCCCCCCCCcchhHHhhhhccccccCCCC
Q psy16437        292 EGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPD  371 (501)
Q Consensus       292 ~g~~~~~~Li~~ADVvi~n~~pg~l~~lGl~~~~L~~~nP~lI~~~~s~fG~~Gp~~~~~g~d~~~~A~sG~~~~~g~~~  371 (501)
                      +||++|++||++|||||||||||+|+||||||++|+++||+||||+|||||++|||++++|||.++||+||+++++|.++
T Consensus        86 ~Gr~~l~~Lv~~ADV~ienfrPg~~~rlGl~ye~L~~~nP~LIy~sisGfG~~GP~a~~~g~D~~~qA~sG~~~~~G~~~  165 (385)
T 4ed9_A           86 EGRELVRRLVAEADVVIENFKLGGLDKYGLDYESLKAINPQLIYCSITGFGHTGPYAERAGYDFMIQGMGGIMDLTGEPD  165 (385)
T ss_dssp             HHHHHHHHHHHTCSEEEECCCTTTTGGGTCSHHHHHHHCTTCEEEEEESSCSSSTTTTSCCCHHHHHHHHSTTTTSSCTT
T ss_pred             HHHHHHHHHHHhCCEEEECCCccHHHHhCCCHHHHHHhCCCeEEEEEEeCCCCCCCCCCCCcHHHHHHHhhhHhhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCcchhhhHHHHHHHHHHHHHHHHHhhcCCceEEEcchhhhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCe
Q psy16437        372 GPPCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVPHQV  451 (501)
Q Consensus       372 ~~P~~~~~~~~D~~ag~~aa~a~laAL~~R~rtG~G~~vdvSl~e~~~~~~~~~~~~~~~~g~~~~r~g~~~~~~~p~~~  451 (501)
                      ++|+.++.+++|+.+|+++++|||+||++|++||+||+||+||+|++++++......|...|....|.||.++..+||++
T Consensus       166 ~~P~~~~~~~~D~~~g~~aa~gilaAL~~R~rtG~Gq~Vdvsl~d~~~~~~~~~~~~~~~~g~~~~r~g~~~~~~~py~~  245 (385)
T 4ed9_A          166 REPQKIGVAFADIFTGLYSVIAIQSALIMRARTGKGQHIDMALFDCMSGVLANQAMNYLASGKSPKRMGNAHPNIAPYQT  245 (385)
T ss_dssp             SCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHTCHHHHHHHHHHSSCCCCCTTSCSSSSSEEE
T ss_pred             CCCccCCchHhHHHHHHHHHHHHHHHHHHhhcCCCceEEEeeHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCccc
Confidence            99999999999999999999999999999999999999999999999988877777888888888899999999999999


Q ss_pred             eeeCCCcEEEEeCChHHHHHHHHHcCCCCcccCCCCCCHHHHHhhhhcc
Q psy16437        452 FKTSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL  500 (501)
Q Consensus       452 y~~aDGwv~i~~~~~~~w~~l~~~lg~~~l~~d~~~~~~~~R~~~~~~l  500 (501)
                      |+|+||||+|++.++++|++||++||++||++||+|+|...|.+|+++|
T Consensus       246 y~t~DG~i~v~~~~~~~w~~l~~~lg~~~l~~dprf~~~~~R~~~~~~l  294 (385)
T 4ed9_A          246 LSVSDGYFIIACGNDGQFGKLSTLLGIGELAKDERFATNSARVANRAAL  294 (385)
T ss_dssp             EEETTEEEEEECCSHHHHHHHHHHTTCGGGGGSTTTSSHHHHHHTHHHH
T ss_pred             eecCCCcEEEEeCCHHHHHHHHHHcCCchhccCccccchhhhHhhHHHH
Confidence            9999999999999999999999999999999999999999999998876
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A* Back     alignment and structure
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti} Back     alignment and structure
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A* Back     alignment and structure
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A* Back     alignment and structure
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A* Back     alignment and structure
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis} Back     alignment and structure
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A* Back     alignment and structure
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti} Back     alignment and structure
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A* Back     alignment and structure
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A* Back     alignment and structure
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis} Back     alignment and structure
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A* Back     alignment and structure
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 501
d1x74a1359 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr 2e-78
d1x74a1359 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr 1e-13
d1q7ea_ 417 c.123.1.1 (A:) Hypothetical protein YfdW {Escheric 3e-71
d1q7ea_417 c.123.1.1 (A:) Hypothetical protein YfdW {Escheric 2e-21
d2vjma1 427 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalob 2e-70
d2vjma1427 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalob 5e-22
d1xk7a1 402 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine 2e-43
d1xk7a1402 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine 2e-20
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Length = 359 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  247 bits (632), Expect = 2e-78
 Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 17/274 (6%)

Query: 216 PLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFT 275
           PLS +R+++L  I  GP   M+L DLGA+V+++++P + D                    
Sbjct: 3   PLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVD---------------GISRD 47

Query: 276 CVNRNKKSVCVDFKTPEGQQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIY 335
            + RN++ V  D K+ +G ++   L  + DVL+E + PG  +RL LG +  +++N +LIY
Sbjct: 48  AMLRNRRIVTADLKSDQGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIY 107

Query: 336 CSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGPPCKVGIASIDLATG-LYAHGAV 394
             +TG+G  GP   + G+DI   S+ G+LH  G  D  P        D   G ++    +
Sbjct: 108 ARMTGWGQTGPRSQQAGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGI 167

Query: 395 MAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLNAGIEGKRWGTSHANVVP-HQVFK 453
           +AAL  +  +GKGQ +D  ++     ++  + A          R         P +  ++
Sbjct: 168 LAALWERQSSGKGQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYE 227

Query: 454 TSNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRY 487
            ++G        + Q+            A  P  
Sbjct: 228 CADGRYVAVGAIEPQFYAAMLAGLGLDAAELPPQ 261
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Length = 359 Back     information, alignment and structure
>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure
>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} Length = 427 Back     information, alignment and structure
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} Length = 427 Back     information, alignment and structure
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} Length = 402 Back     information, alignment and structure
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} Length = 402 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query501
d1q7ea_ 417 Hypothetical protein YfdW {Escherichia coli [TaxId 100.0
d2vjma1 427 Formyl-CoA transferase {Oxalobacter formigenes [Ta 100.0
d1xk7a1 402 Crotonobetainyl-CoA:carnitine CoA-transferase, Cai 100.0
d1x74a1359 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber 100.0
d1q7ea_417 Hypothetical protein YfdW {Escherichia coli [TaxId 99.94
d2vjma1427 Formyl-CoA transferase {Oxalobacter formigenes [Ta 99.94
d1xk7a1402 Crotonobetainyl-CoA:carnitine CoA-transferase, Cai 99.93
d1x74a1359 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber 99.72
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 92.48
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 91.85
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 90.76
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 88.96
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 88.27
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 87.56
>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.3e-76  Score=615.56  Aligned_cols=285  Identities=32%  Similarity=0.500  Sum_probs=254.5

Q ss_pred             CCCCCCcEEEEeCCccchhHHHHHHHHcCCcEEEEecCCCCCcccccCCCCCCCCCcchhhhhhcCCceEEEEeCCChhh
Q psy16437        214 SLPLSNVRILDLTRIIAGPFCTMLLADLGAEVIKVEQPVTGDECRKWGPPFLNNTELSTYFTCVNRNKKSVCVDFKTPEG  293 (501)
Q Consensus       214 ~~pL~GlrVldl~~~~agp~a~~~LAdlGA~VIKVE~p~~gD~~R~~~~~~~~~~~~~~~f~~~nrgKrsv~lDl~~~~g  293 (501)
                      .+||+||||||||+++|||+||++||||||||||||+|..||++|.+++...  .+.|.+|..+|||||||+|||++++|
T Consensus         2 ~~PL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~--~~~s~~~~~~nr~K~si~lDL~~~~g   79 (417)
T d1q7ea_           2 STPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIP--DIDALYFTMLNSNKRSIELNTKTAEG   79 (417)
T ss_dssp             CCTTTTCEEEECCCTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSST--TSCCHHHHTTCTTCEEEECCTTSHHH
T ss_pred             CCCCCCCEEEEcCChhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCC--CCccHHHHHhCCCCeEEEEeCcCHHH
Confidence            4799999999999999999999999999999999999988999999977543  25689999999999999999999999


Q ss_pred             HHHHHHHHhhCCeEEEcCChhhhhhcCCCHHHHhhhCCCcEEEEEeecCCCCCCCCCCcchhHHhhhhccccccCCCCCC
Q psy16437        294 QQIIKDLAKQCDVLVENFVPGKLDRLNLGYKHLSEINSQLIYCSVTGFGSKGPYKDRPGYDIIAASIGGLLHITGHPDGP  373 (501)
Q Consensus       294 ~~~~~~Li~~ADVvi~n~~pg~l~~lGl~~~~L~~~nP~lI~~~~s~fG~~Gp~~~~~g~d~~~~A~sG~~~~~g~~~~~  373 (501)
                      +++|++||++|||||+||||++|+||||||++|+++||+||||+|||||++|||++++|||.++||+||+++.+|.++++
T Consensus        80 ~~~~~~Li~~aDv~i~n~~pg~~~rlGl~~~~l~~~nP~lI~~sisgfG~~GP~~~~~~~D~~~qA~sG~~~~~g~~~~~  159 (417)
T d1q7ea_          80 KEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGP  159 (417)
T ss_dssp             HHHHHHHHHHCSEEEECCCC-------CCHHHHHHHCTTCEEEEEESSCTTSTTTTSCCCHHHHHHHTTHHHHSSCTTSC
T ss_pred             HHHHHHHHhcCcccEeccCCCcHhhcCCCHHHHHhhCCCEEEEeeeccccccccccccccccccccccccccccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcchhhhHHHHHHHHHHHHHHHHHhhcCCceEEEcchhhhHHHHHHHHHHHHHh-----------------cCCCC
Q psy16437        374 PCKVGIASIDLATGLYAHGAVMAALLHKYKTGKGQKIDCNLLSTQVSMLINVGANYLN-----------------AGIEG  436 (501)
Q Consensus       374 P~~~~~~~~D~~ag~~aa~a~laAL~~R~rtG~G~~vdvSl~e~~~~~~~~~~~~~~~-----------------~g~~~  436 (501)
                      |...+.+++|+.+|+++++|||+||++|++||+||+||+||+|++++++...+..+..                 .+...
T Consensus       160 P~~~~~~~~D~~~g~~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  239 (417)
T d1q7ea_         160 PLVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAV  239 (417)
T ss_dssp             CCCCSSCTTTHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHTHHHHHHHHHHHHHSCCTTSTTTTTSCCCSSC
T ss_pred             CcccccccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECHHHHHHHhhHHHHHhhhhhcccccccccccccccccCCCC
Confidence            9999999999999999999999999999999999999999999998776544433321                 12344


Q ss_pred             CCCCCCCCCCCCCCeeee-----CCCcEEEEeCChHHHHHHHHHcCCCCcccCCCCCCHHHHHhhhhcc
Q psy16437        437 KRWGTSHANVVPHQVFKT-----SNGYVTIGTGSDKQYQDMCKVMNLQHLALDPRYLTGALILAMTSHL  500 (501)
Q Consensus       437 ~r~g~~~~~~~p~~~y~~-----aDGwv~i~~~~~~~w~~l~~~lg~~~l~~d~~~~~~~~R~~~~~~l  500 (501)
                      .+.+|.++...|+.+|+|     +||||.+++.++++|.+||++||++||+.|++|.+...|.+|+++|
T Consensus       240 ~r~~~~~~~~~p~~~~~~~~~~t~dg~i~~~~~~~~~w~~l~~~lg~~dl~~d~~~~~~~~r~~~~~~l  308 (417)
T d1q7ea_         240 PRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQPHIFDI  308 (417)
T ss_dssp             CCCTTCCSSSSCEEEEECTTTTTCTTCEEEEECCGGGHHHHHHHTTCGGGGTCTTTSSHHHHGGGHHHH
T ss_pred             CcccccCCCCCcccccccceeecCCCeEEEEeccchhhhHHHHHhCCccccccccccccccccchHHHH
Confidence            566777777777766655     5889999999999999999999999999999999999999998875
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure