Psyllid ID: psy16470

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
Protein Sequence
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCADQNINLNINIDH
Secondary Structure (PSIPRED)
cHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccEEEEcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccccHccccccccEEcccc
Coil and Loop (DISEMBL)
MRDLEKLTGSFRIAIIYFGsgiggnlasaifvpyradvgpagahFGLLACLIvevgpagahFGLLACLIVEVlncwpllkhpEQALMKLLTITFILLLFgllpwvdnFAHLFGFLFGFLLSyallpfvsfgpydrqkKIFLIWVCLMFVIIFLVVLLLLFYLIpiydcelcsyfncipftnefcadqninlninidh
Flexible Loop (DISEMBL)
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCADQNINLNINIDH
Low Complexity Region (SEG)
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKlltitfilllfgllPWVDNFAHlfgflfgfllSYALLPFVSFGPYDRQKKIFLIWVClmfviiflvvllllfyliPIYDCELCSYFNCIPFTNEFCADQNINLNINIDH
Disordered region (IsUnstruct)
******LTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCADQNINLNIN***
Disordered Region (DISOPRED)
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCA************
Disordered Region (DISEMBL)
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCADQNINLNINIDH
Disordered Region (DISPRO)
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCADQNINLNI****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFTNEFCADQNINLNINIDH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	197	2.2.26 [Sep-21-2011]
Q6GMF8	857	Inactive rhomboid protein	yes	N/A	0.878	0.201	0.482	1e-48
A7YWH9	856	Inactive rhomboid protein	yes	N/A	0.893	0.205	0.469	2e-45
Q6PIX5	856	Inactive rhomboid protein	yes	N/A	0.878	0.202	0.472	2e-45
Q96CC6	855	Inactive rhomboid protein	yes	N/A	0.878	0.202	0.467	2e-45
B0VX73	855	Inactive rhomboid protein	yes	N/A	0.878	0.202	0.467	2e-45
A9L8T6	855	Inactive rhomboid protein	N/A	N/A	0.878	0.202	0.467	2e-45
B1MT31	855	Inactive rhomboid protein	N/A	N/A	0.878	0.202	0.467	2e-45
Q6PJF5	856	Inactive rhomboid protein	no	N/A	0.842	0.193	0.483	7e-45
Q499S9	856	Inactive rhomboid protein	yes	N/A	0.893	0.205	0.463	7e-45
Q00M95	827	Inactive rhomboid protein	no	N/A	0.842	0.200	0.478	5e-44

>sp|Q6GMF8|RHDF1_DANRE Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1

 Score =  192 bits (489), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 95/197 (48%), Positives = 128/197 (64%), Gaps = 24/197 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RI+IIY  SGI GNLASAIF+PYRA                 EVGPAG+
Sbjct: 682 LRDLEKLAGWLRISIIYILSGITGNLASAIFLPYRA-----------------EVGPAGS 724

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE++  W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ GF L
Sbjct: 725 QFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFAHISGFISGFFL 784

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVV---LLLLFYLIPIYDCELCSYFNCI 177
           S+A LP++SFG  D  +K   I   ++F+++FL +   L++LFY+ PI  CE C    CI
Sbjct: 785 SFAFLPYISFGRLDMYRKRCQI---IIFLVVFLGLFAGLVVLFYVHPI-KCEWCELLTCI 840

Query: 178 PFTNEFCADQNINLNIN 194
           PFT++FC   ++N +++
Sbjct: 841 PFTDKFCEKYDLNAHLH 857

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.
Danio rerio (taxid: 7955)

>sp|A7YWH9|RHDF1_BOVIN Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1

 Score =  182 bits (461), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 18/194 (9%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SG+ GNLASAIF+PYRA                 EVGPAG+
Sbjct: 681 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRA-----------------EVGPAGS 723

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 724 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFL 783

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           S+A LP++SFG +D  +K   I V  +  +  L  L++LFY  P+  CE C +  CIPFT
Sbjct: 784 SFAFLPYISFGKFDLYRKRCQIIVFQLVFLGLLAGLVVLFYFYPV-RCEWCEFLTCIPFT 842

Query: 181 NEFCADQNINLNIN 194
           ++FC    ++  ++
Sbjct: 843 DKFCEKYELDAQLH 856

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Bos taurus (taxid: 9913)

>sp|Q6PIX5|RHDF1_MOUSE Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2

 Score =  182 bits (461), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 93/197 (47%), Positives = 123/197 (62%), Gaps = 24/197 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SGI GNLASAIF+PYRA                 EVGPAG+
Sbjct: 681 LRDLEKLAGWHRIAIIYLLSGITGNLASAIFLPYRA-----------------EVGPAGS 723

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 724 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISGFVSGLFL 783

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIF---LVVLLLLFYLIPIYDCELCSYFNCI 177
           S+A LP++SFG +D  +K   I   ++F ++F   L  L++LFY  P+  CE C +  CI
Sbjct: 784 SFAFLPYISFGKFDLYRKRCQI---IIFQVVFLGLLAGLVVLFYFYPV-RCEWCEFLTCI 839

Query: 178 PFTNEFCADQNINLNIN 194
           PFT++FC    ++  ++
Sbjct: 840 PFTDKFCEKYELDAQLH 856

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Mus musculus (taxid: 10090)

>sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2

 Score =  182 bits (461), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/197 (46%), Positives = 124/197 (62%), Gaps = 24/197 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SG+ GNLASAIF+PYRA                 EVGPAG+
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRA-----------------EVGPAGS 722

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 723 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFL 782

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIF---LVVLLLLFYLIPIYDCELCSYFNCI 177
           S+A LP++SFG +D  +K   I   ++F ++F   L  L++LFY+ P+  CE C +  CI
Sbjct: 783 SFAFLPYISFGKFDLYRKRCQI---IIFQVVFLGLLAGLVVLFYVYPV-RCEWCEFLTCI 838

Query: 178 PFTNEFCADQNINLNIN 194
           PFT++FC    ++  ++
Sbjct: 839 PFTDKFCEKYELDAQLH 855

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Homo sapiens (taxid: 9606)

>sp|B0VX73|RHDF1_CALJA Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3 SV=1

 Score =  181 bits (460), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/197 (46%), Positives = 124/197 (62%), Gaps = 24/197 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SG+ GNLASAIF+PYRA                 EVGPAG+
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRA-----------------EVGPAGS 722

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 723 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFL 782

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIF---LVVLLLLFYLIPIYDCELCSYFNCI 177
           S+A LP++SFG +D  +K   I   ++F ++F   L  L++LFY+ P+  CE C +  CI
Sbjct: 783 SFAFLPYISFGKFDLYRKRCQI---IVFQVVFLGLLAGLVVLFYVYPV-RCEWCEFLTCI 838

Query: 178 PFTNEFCADQNINLNIN 194
           PFT++FC    ++  ++
Sbjct: 839 PFTDKFCEKYELDAQLH 855

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Callithrix jacchus (taxid: 9483)

>sp|A9L8T6|RHDF1_PAPAN Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1

 Score =  181 bits (460), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/197 (46%), Positives = 123/197 (62%), Gaps = 24/197 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SG+ GNLASAIF+PYRA                 EVGPAG+
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRA-----------------EVGPAGS 722

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 723 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFL 782

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIF---LVVLLLLFYLIPIYDCELCSYFNCI 177
           S+A LP++SFG +D  +K   I   ++F ++F   L  L++LFY  P+  CE C +  CI
Sbjct: 783 SFAFLPYISFGKFDLYRKRCQI---IIFQVVFLGLLAGLVVLFYFYPV-RCEWCEFLTCI 838

Query: 178 PFTNEFCADQNINLNIN 194
           PFT++FC    ++  ++
Sbjct: 839 PFTDKFCEKYELDAQLH 855

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Papio anubis (taxid: 9555)

>sp|B1MT31|RHDF1_CALMO Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3 SV=1

 Score =  181 bits (460), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/197 (46%), Positives = 123/197 (62%), Gaps = 24/197 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SG+ GNLASAIF+PYRA                 EVGPAG+
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRA-----------------EVGPAGS 722

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 723 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFL 782

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIF---LVVLLLLFYLIPIYDCELCSYFNCI 177
           S+A LP++SFG +D  +K   I   ++F ++F   L  L++LFY  P+  CE C +  CI
Sbjct: 783 SFAFLPYISFGKFDLYRKRCQI---IVFQVVFLGLLAGLVVLFYFYPV-RCEWCEFLTCI 838

Query: 178 PFTNEFCADQNINLNIN 194
           PFT++FC    ++  ++
Sbjct: 839 PFTDKFCEKYELDAQLH 855

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Callicebus moloch (taxid: 9523)

>sp|Q6PJF5|RHDF2_HUMAN Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2

 Score =  179 bits (455), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 18/184 (9%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAII+  SGI GNLASAIF+PYRA                 EVGPAG+
Sbjct: 681 LRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRA-----------------EVGPAGS 723

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FGLLACL VE+   WPLL+ P +A + L  I   L + GLLPW+DN AH+FGFL G LL
Sbjct: 724 QFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSGLLL 783

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           ++A LP+++FG  D+ +K  LI V L+        L+L  Y+ PI +     +  C PFT
Sbjct: 784 AFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAALVLWLYIYPI-NWPWIEHLTCFPFT 842

Query: 181 NEFC 184
           + FC
Sbjct: 843 SRFC 846

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Homo sapiens (taxid: 9606)

>sp|Q499S9|RHDF1_RAT Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2 SV=1

 Score =  179 bits (455), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 90/194 (46%), Positives = 119/194 (61%), Gaps = 18/194 (9%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAIIY  SG+ GNLASAIF+PYRA                 EVGPAG+
Sbjct: 681 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRA-----------------EVGPAGS 723

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FG+LACL VE+   W +L  P +A  KLL +   L  FGLLPW+DNFAH+ GF+ G  L
Sbjct: 724 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISGFVSGLFL 783

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           S+A LP++SFG +D  +K   I +     +  L  L++LFY  P+  CE C +  CIPFT
Sbjct: 784 SFAFLPYISFGKFDLYRKRCQIIIFQAVFLGLLAGLVVLFYFYPV-RCEWCEFLTCIPFT 842

Query: 181 NEFCADQNINLNIN 194
           ++FC    ++  ++
Sbjct: 843 DKFCEKYELDAQLH 856

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Rattus norvegicus (taxid: 10116)

>sp|Q00M95|RHDF2_CANFA Inactive rhomboid protein 2 OS=Canis familiaris GN=RHBDF2 PE=2 SV=1

 Score =  177 bits (448), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 88/184 (47%), Positives = 112/184 (60%), Gaps = 18/184 (9%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           +RDLEKL G  RIAII+  SGI GNLASAIF+PYRA                 EVGPAG+
Sbjct: 652 LRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRA-----------------EVGPAGS 694

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FGLLACL VE+   W LL+ P +A + L  I   L + GLLPW+DN AH+FGFL G LL
Sbjct: 695 QFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSGLLL 754

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           ++A LP+++FG  D+ +K  LI V L+        L++  Y+ PI +     Y  C PFT
Sbjct: 755 AFAFLPYITFGTSDKYRKRALILVSLLVFAGLFASLVIWLYVYPI-NWPWIEYLTCFPFT 813

Query: 181 NEFC 184
           + FC
Sbjct: 814 SRFC 817

Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.

Canis familiaris (taxid: 9615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
270012402	1455	hypothetical protein TcasGA2_TC006551 [T	0.883	0.119	0.696	2e-78
91089053	1486	PREDICTED: similar to rhomboid [Triboliu	0.883	0.117	0.696	2e-78
328714294	1386	PREDICTED: rhomboid family member 1-like	0.883	0.125	0.743	4e-71
328714292	1358	PREDICTED: rhomboid family member 1-like	0.883	0.128	0.743	4e-71
328776234	894	PREDICTED: rhomboid family member 1 [Api	0.883	0.194	0.623	7e-68
380027526	1022	PREDICTED: inactive rhomboid protein 1-l	0.883	0.170	0.623	7e-68
307171848	925	Rhomboid family member 1 [Camponotus flo	0.883	0.188	0.623	5e-67
350416907	888	PREDICTED: inactive rhomboid protein 1-l	0.883	0.195	0.617	5e-66
340724954	1834	PREDICTED: hypothetical protein LOC10064	0.883	0.094	0.617	9e-66
345478808	824	PREDICTED: inactive rhomboid protein 2-l	0.883	0.211	0.623	1e-61

>gi|270012402|gb|EFA08850.1| hypothetical protein TcasGA2_TC006551 [Tribolium castaneum]

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 133/191 (69%), Positives = 152/191 (79%), Gaps = 17/191 (8%)

Query: 1    MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
            MRDLEKLTGS RI IIY GSG+ GNLASAIFVPYRADVGPAG+                 
Sbjct: 1275 MRDLEKLTGSLRIGIIYIGSGVAGNLASAIFVPYRADVGPAGSQ---------------- 1318

Query: 61   HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
             FGLLACLIVEVLN WP+LKHP QAL KLL+IT +L L GLLPWVDN+AHLFGF+FGFLL
Sbjct: 1319 -FGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPWVDNYAHLFGFVFGFLL 1377

Query: 121  SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
            SYALLPF+SFG Y+R+KKI LIWVCL+   +  + L+LLFY+IP+YDC++CSYFNCIPFT
Sbjct: 1378 SYALLPFISFGVYERRKKIVLIWVCLVSAGVLFICLVLLFYIIPVYDCKICSYFNCIPFT 1437

Query: 181  NEFCADQNINL 191
             +FCA QNIN 
Sbjct: 1438 RDFCASQNINF 1448

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91089053|ref|XP_970266.1| PREDICTED: similar to rhomboid [Tribolium castaneum]

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 133/191 (69%), Positives = 152/191 (79%), Gaps = 17/191 (8%)

Query: 1    MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
            MRDLEKLTGS RI IIY GSG+ GNLASAIFVPYRADVGPAG+                 
Sbjct: 1306 MRDLEKLTGSLRIGIIYIGSGVAGNLASAIFVPYRADVGPAGSQ---------------- 1349

Query: 61   HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
             FGLLACLIVEVLN WP+LKHP QAL KLL+IT +L L GLLPWVDN+AHLFGF+FGFLL
Sbjct: 1350 -FGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPWVDNYAHLFGFVFGFLL 1408

Query: 121  SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
            SYALLPF+SFG Y+R+KKI LIWVCL+   +  + L+LLFY+IP+YDC++CSYFNCIPFT
Sbjct: 1409 SYALLPFISFGVYERRKKIVLIWVCLVSAGVLFICLVLLFYIIPVYDCKICSYFNCIPFT 1468

Query: 181  NEFCADQNINL 191
             +FCA QNIN 
Sbjct: 1469 RDFCASQNINF 1479

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328714294|ref|XP_001950020.2| PREDICTED: rhomboid family member 1-like isoform 1 [Acyrthosiphon pisum]

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 142/191 (74%), Positives = 156/191 (81%), Gaps = 17/191 (8%)

Query: 1    MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
            MRDLEKLTGS RIA+IY GSG+ GNL SAIFVPYRADVGPAG+                 
Sbjct: 1206 MRDLEKLTGSLRIALIYLGSGVAGNLGSAIFVPYRADVGPAGSQ---------------- 1249

Query: 61   HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
             FGLLACLIVEVLNCWP+LK PEQAL KLL ITF+L L GLLPWVDNFAHLFGF+FGFLL
Sbjct: 1250 -FGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPWVDNFAHLFGFIFGFLL 1308

Query: 121  SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
            SYALLPFVSFGPYDRQKKIFLIWVCL+  +   ++LLLLFYLIP+YDCE+CSYFNCIP T
Sbjct: 1309 SYALLPFVSFGPYDRQKKIFLIWVCLLSALFLFLLLLLLFYLIPMYDCEMCSYFNCIPIT 1368

Query: 181  NEFCADQNINL 191
             +FCA+QNIN 
Sbjct: 1369 KDFCANQNINF 1379

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328714292|ref|XP_003245324.1| PREDICTED: rhomboid family member 1-like isoform 2 [Acyrthosiphon pisum]

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 142/191 (74%), Positives = 156/191 (81%), Gaps = 17/191 (8%)

Query: 1    MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
            MRDLEKLTGS RIA+IY GSG+ GNL SAIFVPYRADVGPAG+                 
Sbjct: 1178 MRDLEKLTGSLRIALIYLGSGVAGNLGSAIFVPYRADVGPAGSQ---------------- 1221

Query: 61   HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
             FGLLACLIVEVLNCWP+LK PEQAL KLL ITF+L L GLLPWVDNFAHLFGF+FGFLL
Sbjct: 1222 -FGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPWVDNFAHLFGFIFGFLL 1280

Query: 121  SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
            SYALLPFVSFGPYDRQKKIFLIWVCL+  +   ++LLLLFYLIP+YDCE+CSYFNCIP T
Sbjct: 1281 SYALLPFVSFGPYDRQKKIFLIWVCLLSALFLFLLLLLLFYLIPMYDCEMCSYFNCIPIT 1340

Query: 181  NEFCADQNINL 191
             +FCA+QNIN 
Sbjct: 1341 KDFCANQNINF 1351

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776234|ref|XP_395087.4| PREDICTED: rhomboid family member 1 [Apis mellifera]

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 119/191 (62%), Positives = 147/191 (76%), Gaps = 17/191 (8%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           MRDLEKLTGS RIA+IYF   + GNLASAIFVPYRA                 EVGPAGA
Sbjct: 715 MRDLEKLTGSLRIALIYFIGALAGNLASAIFVPYRA-----------------EVGPAGA 757

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
           HF LLA LIVEVL+CWP+LKHP +AL KL+ +   LL+ G+LPWVDN+AHLFGF+FGFL 
Sbjct: 758 HFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPWVDNYAHLFGFIFGFLA 817

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           +YALLPF+SFG YDR++KI+LIW+C++ +++   +LL LFY +P+Y+CE+C  FNCIPFT
Sbjct: 818 AYALLPFISFGQYDRRRKIWLIWICMILIVVLFTLLLALFYNVPVYECEVCKLFNCIPFT 877

Query: 181 NEFCADQNINL 191
            +FCA QNIN 
Sbjct: 878 RDFCASQNINF 888

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027526|ref|XP_003697473.1| PREDICTED: inactive rhomboid protein 1-like [Apis florea]

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 119/191 (62%), Positives = 147/191 (76%), Gaps = 17/191 (8%)

Query: 1    MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
            MRDLEKLTGS RIA+IYF   + GNLASAIFVPYRA                 EVGPAGA
Sbjct: 843  MRDLEKLTGSLRIALIYFIGALAGNLASAIFVPYRA-----------------EVGPAGA 885

Query: 61   HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            HF LLA LIVEVL+CWP+LKHP +AL KL+ +   LL+ G+LPWVDN+AHLFGF+FGFL 
Sbjct: 886  HFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPWVDNYAHLFGFIFGFLA 945

Query: 121  SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
            +YALLPF+SFG YDR++KI+LIW+C++ +++   +LL LFY +P+Y+CE+C  FNCIPFT
Sbjct: 946  AYALLPFISFGQYDRRRKIWLIWICMILIVVLFTLLLALFYNVPVYECEVCKLFNCIPFT 1005

Query: 181  NEFCADQNINL 191
             +FCA QNIN 
Sbjct: 1006 RDFCASQNINF 1016

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171848|gb|EFN63503.1| Rhomboid family member 1 [Camponotus floridanus]

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 119/191 (62%), Positives = 145/191 (75%), Gaps = 17/191 (8%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           MRDLEKLTGS RIA+IYF   + GNLASAIFVPYRA                 EVGPAGA
Sbjct: 746 MRDLEKLTGSLRIALIYFIGALAGNLASAIFVPYRA-----------------EVGPAGA 788

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
           HF LLA L+VEVL+CWP+LKHP +AL KL+ I   LL+ G+LPWVDN+AHLFGF+FGFL 
Sbjct: 789 HFALLATLVVEVLHCWPMLKHPRRALSKLILILVGLLMLGILPWVDNYAHLFGFIFGFLA 848

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           +YAL+PF+SFG YDR++KI LIWVCL+ ++    +LL LFY +P+Y+CE+C  FNC+PFT
Sbjct: 849 AYALMPFISFGHYDRRRKILLIWVCLILIVGLFALLLALFYNVPVYECEVCKLFNCVPFT 908

Query: 181 NEFCADQNINL 191
            +FCA QNIN 
Sbjct: 909 RDFCASQNINF 919

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416907|ref|XP_003491162.1| PREDICTED: inactive rhomboid protein 1-like, partial [Bombus impatiens]

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 118/191 (61%), Positives = 146/191 (76%), Gaps = 17/191 (8%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           MRDLEKLTGS RIA+IYF   + GNLASAIFVPYRA                 EVGPAGA
Sbjct: 709 MRDLEKLTGSLRIALIYFIGALAGNLASAIFVPYRA-----------------EVGPAGA 751

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
           HF LLA LIVEVL+CWP+LKHP + L KL+ +   LL+ G+LPWVDN+AHLFGF+FGFL 
Sbjct: 752 HFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPWVDNYAHLFGFIFGFLA 811

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           +YAL+PF+SFG YDR++KI+LIW+CL+ +++   +LL LFY +P+Y+CE+C  FNCIPFT
Sbjct: 812 AYALMPFISFGHYDRRRKIWLIWICLILIVVLFTLLLALFYNVPVYECEVCKLFNCIPFT 871

Query: 181 NEFCADQNINL 191
            +FCA QNIN 
Sbjct: 872 RDFCASQNINF 882

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724954|ref|XP_003400842.1| PREDICTED: hypothetical protein LOC100644578 [Bombus terrestris]

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 118/191 (61%), Positives = 146/191 (76%), Gaps = 17/191 (8%)

Query: 1    MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
            MRDLEKLTGS RIA+IYF   + GNLASAIFVPYRA                 EVGPAGA
Sbjct: 1655 MRDLEKLTGSLRIALIYFIGALAGNLASAIFVPYRA-----------------EVGPAGA 1697

Query: 61   HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            HF LLA LIVEVL+CWP+LKHP + L KL+ +   LL+ G+LPWVDN+AHLFGF+FGFL 
Sbjct: 1698 HFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPWVDNYAHLFGFIFGFLA 1757

Query: 121  SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
            +YAL+PF+SFG YDR++KI+LIW+CL+ +++   +LL LFY +P+Y+CE+C  FNCIPFT
Sbjct: 1758 AYALMPFISFGHYDRRRKIWLIWICLILIVVLFTLLLALFYNVPVYECEVCKLFNCIPFT 1817

Query: 181  NEFCADQNINL 191
             +FCA QNIN 
Sbjct: 1818 RDFCASQNINF 1828

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345478808|ref|XP_001605580.2| PREDICTED: inactive rhomboid protein 2-like [Nasonia vitripennis]

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 119/191 (62%), Positives = 145/191 (75%), Gaps = 17/191 (8%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
           MRDLEKLTGS RIA+IYF   + GNLASAIFVPYRA                 EVGPAGA
Sbjct: 645 MRDLEKLTGSLRIALIYFTGALAGNLASAIFVPYRA-----------------EVGPAGA 687

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
           HF LLA L+VEVL+CWP+LK+P +AL KL+ I   LLL G+LPWVDN+AHLFGF+FGFL 
Sbjct: 688 HFALLATLVVEVLHCWPMLKYPRRALTKLILILVGLLLLGVLPWVDNYAHLFGFIFGFLA 747

Query: 121 SYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLIPIYDCELCSYFNCIPFT 180
           +YA +PF+SFG YDR++KIF+IWVCL+ ++    +LL LFY +P+Y+CELC  FNC+PFT
Sbjct: 748 AYAFMPFISFGHYDRRRKIFVIWVCLILIVGLFGLLLGLFYNVPMYECELCKLFNCVPFT 807

Query: 181 NEFCADQNINL 191
            +FCA QNIN 
Sbjct: 808 RDFCASQNINF 818

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
UNIPROTKB|H0Y6L9	232	RHBDF1 "Inactive rhomboid prot	0.710	0.603	0.333	1e-20
UNIPROTKB|E1C4R0	769	E1C4R0 "Uncharacterized protei	0.710	0.182	0.347	3.9e-20
UNIPROTKB|E1BW31	772	E1BW31 "Uncharacterized protei	0.710	0.181	0.347	3.9e-20
UNIPROTKB|K7GRW6	774	LOC100517883 "Uncharacterized	0.710	0.180	0.340	1.1e-19
UNIPROTKB|B0VX73	855	RHBDF1 "Inactive rhomboid prot	0.710	0.163	0.340	1.3e-19
UNIPROTKB|B1MT31	855	RHBDF1 "Inactive rhomboid prot	0.710	0.163	0.340	1.3e-19
UNIPROTKB|A7YWH9	856	RHBDF1 "Inactive rhomboid prot	0.710	0.163	0.340	1.3e-19
RGD|1305075	856	Rhbdf1 "rhomboid 5 homolog 1 (	0.710	0.163	0.333	1.3e-19
UNIPROTKB|F1RGZ3	862	LOC100517883 "Uncharacterized	0.710	0.162	0.340	1.3e-19
UNIPROTKB|E2QZU4	866	RHBDF1 "Uncharacterized protei	0.710	0.161	0.340	1.3e-19

UNIPROTKB|H0Y6L9 RHBDF1 "Inactive rhomboid protein 1" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 47/141 (33%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:    93 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISG 152

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I +                   P+  CE C +
Sbjct:   153 FISGLFLSFAFLPYISFGKFDLYRKRCQIIIFQVVFLGLLAGLVVLFYVYPVR-CEWCEF 211

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   212 LTCIPFTDKFCEKYELDAQLH 232

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1C4R0 E1C4R0 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 249 (92.7 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 49/141 (34%), Positives = 68/141 (48%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   630 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISG 689

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   PI  CE C +
Sbjct:   690 FISGFFLSFAFLPYISFGKFDLYRKRCQIIVFQLIFIALFSGLVILFYFYPI-KCEWCEF 748

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC   +++  ++
Sbjct:   749 LTCIPFTDKFCEKYDLDAQLH 769

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BW31 E1BW31 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 249 (92.7 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 49/141 (34%), Positives = 68/141 (48%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   633 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISG 692

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   PI  CE C +
Sbjct:   693 FISGFFLSFAFLPYISFGKFDLYRKRCQIIVFQLIFIALFSGLVILFYFYPI-KCEWCEF 751

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC   +++  ++
Sbjct:   752 LTCIPFTDKFCEKYDLDAQLH 772

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0042058 "regulation of epidermal growth factor receptor signaling pathway" evidence=IEA

GO:0050709 "negative regulation of protein secretion" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

UNIPROTKB|K7GRW6 LOC100517883 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 245 (91.3 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 48/141 (34%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   635 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISG 694

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   P+  CE C +
Sbjct:   695 FVSGLFLSFAFLPYISFGKFDLYRKRCQIIVFQVVFLGLLAGLVVLFYVHPVR-CEWCEF 753

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   754 LTCIPFTDKFCEKYELDAQLH 774

GO:0016021 "integral to membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|B0VX73 RHBDF1 "Inactive rhomboid protein 1" [Callithrix jacchus (taxid:9483)]

 Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 48/141 (34%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   716 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISG 775

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   P+  CE C +
Sbjct:   776 FISGLFLSFAFLPYISFGKFDLYRKRCQIIVFQVVFLGLLAGLVVLFYVYPVR-CEWCEF 834

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   835 LTCIPFTDKFCEKYELDAQLH 855

GO:0000139 "Golgi membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0042058 "regulation of epidermal growth factor receptor signaling pathway" evidence=ISS

GO:0050709 "negative regulation of protein secretion" evidence=ISS

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=ISS

UNIPROTKB|B1MT31 RHBDF1 "Inactive rhomboid protein 1" [Callicebus moloch (taxid:9523)]

 Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 48/141 (34%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   716 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISG 775

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   P+  CE C +
Sbjct:   776 FISGLFLSFAFLPYISFGKFDLYRKRCQIIVFQVVFLGLLAGLVVLFYFYPVR-CEWCEF 834

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   835 LTCIPFTDKFCEKYELDAQLH 855

GO:0000139 "Golgi membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0042058 "regulation of epidermal growth factor receptor signaling pathway" evidence=ISS

GO:0050709 "negative regulation of protein secretion" evidence=ISS

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=ISS

UNIPROTKB|A7YWH9 RHBDF1 "Inactive rhomboid protein 1" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 48/141 (34%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   717 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISG 776

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   P+  CE C +
Sbjct:   777 FISGLFLSFAFLPYISFGKFDLYRKRCQIIVFQLVFLGLLAGLVVLFYFYPVR-CEWCEF 835

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   836 LTCIPFTDKFCEKYELDAQLH 856

GO:0016477 "cell migration" evidence=ISS

GO:0042058 "regulation of epidermal growth factor receptor signaling pathway" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0000139 "Golgi membrane" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=ISS

GO:0050709 "negative regulation of protein secretion" evidence=ISS

GO:0019838 "growth factor binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

RGD|1305075 Rhbdf1 "rhomboid 5 homolog 1 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 47/141 (33%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   717 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISG 776

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I +                   P+  CE C +
Sbjct:   777 FVSGLFLSFAFLPYISFGKFDLYRKRCQIIIFQAVFLGLLAGLVVLFYFYPVR-CEWCEF 835

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   836 LTCIPFTDKFCEKYELDAQLH 856

GO:0000139 "Golgi membrane" evidence=ISO;ISS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO;ISS

GO:0006508 "proteolysis" evidence=IEA

GO:0008283 "cell proliferation" evidence=ISO;ISS

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016477 "cell migration" evidence=ISO;ISS

GO:0019838 "growth factor binding" evidence=IEA

GO:0042058 "regulation of epidermal growth factor receptor signaling pathway" evidence=ISO;ISS

GO:0050708 "regulation of protein secretion" evidence=ISO

GO:0050709 "negative regulation of protein secretion" evidence=ISO;ISS

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=ISO;ISS

UNIPROTKB|F1RGZ3 LOC100517883 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 48/141 (34%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   723 EVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISG 782

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   P+  CE C +
Sbjct:   783 FVSGLFLSFAFLPYISFGKFDLYRKRCQIIVFQVVFLGLLAGLVVLFYVHPVR-CEWCEF 841

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   842 LTCIPFTDKFCEKYELDAQLH 862

GO:0016021 "integral to membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E2QZU4 RHBDF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 48/141 (34%), Positives = 67/141 (47%)

Query:    54 EVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKXXXXXXXXXXXXXXPWVDNFAHXXX 113
             EVGPAG+ FG+LACL VE+   W +L  P +A  K              PW+DNFAH   
Sbjct:   727 EVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFAHISG 786

Query:   114 XXXXXXXSYALLPFVSFGPYDRQKKIFLIWVCXXXXXXXXXXXXXXXXXXPIYDCELCSY 173
                    S+A LP++SFG +D  +K   I V                   P+  CE C +
Sbjct:   787 FISGLFLSFAFLPYISFGKFDLYRKRCQIIVFQVVFLGLLAGLVILFYFYPVR-CEWCEF 845

Query:   174 FNCIPFTNEFCADQNINLNIN 194
               CIPFT++FC    ++  ++
Sbjct:   846 LTCIPFTDKFCEKYELDAQLH 866

GO:0016021 "integral to membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	197
pfam01694	146	pfam01694, Rhomboid, Rhomboid family	7e-17
PTZ00101	278	PTZ00101, PTZ00101, rhomboid-1 protease; Provision	1e-04
COG0705	228	COG0705, COG0705, Membrane associated serine prote	6e-04

>gnl|CDD|216649 pfam01694, Rhomboid, Rhomboid family

 Score = 73.4 bits (181), Expect = 7e-17
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 16/127 (12%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
              LE++ GS R  ++Y  SG+ G+L S +F P                     VG +GA
Sbjct: 34  GIPLERILGSVRFLLLYLLSGLAGSLLSYLFSPA----------------SSPSVGASGA 77

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLL 120
            FGLL  L+V +     LL +   AL+ LL I  + LL G LP + NFAHL G + G LL
Sbjct: 78  IFGLLGALLVLLPRNRILLFNFPGALLLLLGIILLNLLLGFLPGISNFAHLGGLIAGLLL 137

Query: 121 SYALLPF 127
            + LL  
Sbjct: 138 GFLLLRR 144

This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite. Length = 146

>gnl|CDD|185445 PTZ00101, PTZ00101, rhomboid-1 protease; Provisional

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 28/122 (22%)

Query: 4   LEKLTGSFRIAIIYFGSGIGGNL--ASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAH 61
           LEK  G  +I I+YF +GI GN+  +S  + P                   ++VG + + 
Sbjct: 132 LEKNYGIVKIIILYFLTGIYGNILSSSVTYCP-------------------IKVGASTSG 172

Query: 62  FGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLL-----PWVDNFAHLFGFLF 116
            GLL  +  E++  W +++H E+ +  +  I F L+ F          +D+  HL G L 
Sbjct: 173 MGLLGIVTSELILLWHVIRHRERVVFNI--IFFSLISFFYYFTFNGSNIDHVGHLGGLLS 230

Query: 117 GF 118
           G 
Sbjct: 231 GI 232

Length = 278

>gnl|CDD|223777 COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 13/128 (10%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVP--YRADVGPAGAHFGLLACLIVEVGPA 58
             +LE+  G+ R  + Y  SG+   LA  +F P      +G +GA FGLL    +     
Sbjct: 95  GSNLERRLGTLRFLLFYLLSGLLAGLAQVLFGPKGGAPSLGASGAIFGLLGAYFL----- 149

Query: 59  GAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGF 118
              F     L++ +    P L      ++  L  +         P V   AHL G + G 
Sbjct: 150 --LFPFARILLLFLSLPRPAL----ILILIWLLYSLFSGAGSFGPSVAWSAHLGGLIGGL 203

Query: 119 LLSYALLP 126
           LL+  L  
Sbjct: 204 LLAALLSR 211

Length = 228

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	197
KOG2290|consensus	652		100.0
KOG2289|consensus	316		99.91
PTZ00101	278	rhomboid-1 protease; Provisional	99.87
COG0705	228	Membrane associated serine protease [Amino acid tr	99.59
PRK10907	276	intramembrane serine protease GlpG; Provisional	99.56
PF01694	145	Rhomboid: Rhomboid family; InterPro: IPR022764 In	99.44
KOG2632|consensus	258		96.72
KOG2980|consensus	310		95.47
PF08551	99	DUF1751: Eukaryotic integral membrane protein (DUF	82.38
COG0705	228	Membrane associated serine protease [Amino acid tr	81.5

>KOG2290|consensus

Probab=100.00  E-value=8.9e-37  Score=273.65  Aligned_cols=174  Identities=50%  Similarity=1.009  Sum_probs=157.8

Q ss_pred             ChhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCcccc
Q psy16470          1 MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLK   80 (197)
Q Consensus         1 ~~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~   80 (197)
                      ||++|+..|+.|..++|++||+.||++|++|.|+++.||+||+.||                 ++++++++++++|+.+.
T Consensus       478 mrdlEkL~g~~riAIiy~~SGitGNLASAIFlpY~~eVgPa~sQ~G-----------------ila~l~vEl~qs~~il~  540 (652)
T KOG2290|consen  478 MRDLEKLAGWHRIAIIYFLSGITGNLASAIFLPYRAEVGPAGSQFG-----------------ILACLFVELFQSWQILE  540 (652)
T ss_pred             HHHHHHhhcchhhheeeecccccccchheeeeccccccCCcccccc-----------------hHHHHHHHHHhhhHhhh
Confidence            7899999999999999999999999999999999999999999999                 89999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHhhcccccCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16470         81 HPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLLLF  160 (197)
Q Consensus        81 ~p~~~l~~l~~~~~i~~~~g~~p~i~~~AHlGG~i~G~l~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f  160 (197)
                      +|++++..++...++.++ |+.|+||||||+.|+++|++.+++++|+++|++.|..+|++++.+..+++..++..++++|
T Consensus       541 ~~w~a~~~Lia~~L~L~i-GliPWiDN~aHlfG~i~GLl~s~~~~PYi~Fg~~d~yrKr~~ilIs~ivf~~Lla~Lvv~f  619 (652)
T KOG2290|consen  541 RPWRAFFHLIATLLVLCI-GLIPWIDNWAHLFGTIFGLLTSIIFLPYIDFGDFDLYRKRFYILISQIVFSGLLAILVVVF  619 (652)
T ss_pred             hHHHHHHHHHHHHHHHHh-ccccchhhHHHHHHHHHHHHHHHHhhccccccchhhhhhHHHHHHHHHHHHHHHHHHHHhe
Confidence            999988777766555554 9999999999999999999999999999999998887888989999888889999999999


Q ss_pred             hhcCCCCCCcCcceeeeeCCCCccccccccccccc
Q psy16470        161 YLIPIYDCELCSYFNCIPFTNEFCADQNINLNINI  195 (197)
Q Consensus       161 ~~~~~~~C~~c~y~~Cip~~~~~C~~~~~~~~~~~  195 (197)
                      |.+| -+|+||.|+||+|+++.+|+.+  .+++|+
T Consensus       620 y~~~-i~cpWce~ltClP~~~~~~e~~--eLd~~L  651 (652)
T KOG2290|consen  620 YNYP-IDCPWCEHLTCLPFTDCFCEKY--ELDKWL  651 (652)
T ss_pred             eecc-cCCchhhhccccchhhhhhhhh--hhhhcC
Confidence            9654 5899999999999997666655  677765

>KOG2289|consensus

Probab=99.91  E-value=5.2e-25  Score=192.72  Aligned_cols=156  Identities=37%  Similarity=0.693  Sum_probs=125.0

Q ss_pred             hhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCccccch
Q psy16470          3 DLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHP   82 (197)
Q Consensus         3 ~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~~p   82 (197)
                      .+|+++|.+|+.++|++||++|++++.+++|+.++|||||++||                 |+||++++...||..++.+
T Consensus       148 ~LE~~~G~~RiglIYl~gg~aGSlls~l~d~~~~sVGASggvfa-----------------LlgA~Ls~l~~Nw~~m~~~  210 (316)
T KOG2289|consen  148 PLEQVHGFLRIGLIYLAGGVAGSLLSSLFDPNSISVGASGGVFA-----------------LLGAHLSNLLTNWTIMKNK  210 (316)
T ss_pred             cHHhhcCceEEeeehhhhhhhhHHHHHHhccCCceecccHHHHH-----------------HHHHHHHHHHhhHHHhcch
Confidence            58999999999999999999999999999998877777666666                 9999999999999999887


Q ss_pred             HHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHhhcccccCC----------c-cchhhHHHHHHHHH--HH
Q psy16470         83 EQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGP----------Y-DRQKKIFLIWVCLM--FV  149 (197)
Q Consensus        83 ~~~l~~l~~~~~i~~~~g~~p~i~~~AHlGG~i~G~l~~~~l~p~~~~~~----------~-~~~~~~~~~~~~~~--~~  149 (197)
                      ...++.+++++.+++.+|+.|.+|+++|+||+++|..+++++.+..+++.          + +++++....|+++.  .+
T Consensus       211 ~~~l~~ll~Ii~i~l~~G~~~~~~~~~h~gg~~~G~~~~fil~~~g~~~~~~~~~~~~~~~~~~~~~q~~~w~~~~~~~v  290 (316)
T KOG2289|consen  211 FAALRTLLIIIFINLDLGFAPYVDNFAHIGGLLAGFLLGFVLHIGGQLGGITIGLIVLRVFSKRLPYQLLLWIVLLVYLV  290 (316)
T ss_pred             HHHHHHHHHHHHHHHhhccccceeccccccccCCCcchhHHhhhccceeEEeccceeeeccccccccchHHHHHHHHHHH
Confidence            77777888888999999999999999999999999999999998766531          1 12222235555533  23


Q ss_pred             HHHHHHHHHHHhhcCCCCCCcCcceeeee
Q psy16470        150 IIFLVVLLLLFYLIPIYDCELCSYFNCIP  178 (197)
Q Consensus       150 ~~~~~~l~~~f~~~~~~~C~~c~y~~Cip  178 (197)
                      .++++.++.+|-.   ++|.||+++.|+|
T Consensus       291 ~~~~~~~~~if~~---~~~~~~~~~~~~~  316 (316)
T KOG2289|consen  291 AGLFASLFNIFDG---KYCLWCHPLSCVP  316 (316)
T ss_pred             HHHHHHHHHhhcC---CccccccccCCCC
Confidence            3344444444433   8999999999986

>PTZ00101 rhomboid-1 protease; Provisional

Probab=99.87  E-value=2.7e-21  Score=167.43  Aligned_cols=146  Identities=23%  Similarity=0.410  Sum_probs=96.5

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCccccc
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKH   81 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~~   81 (197)
                      +.+|+.+|++|+.++|++||++|++++..+.|...++||||                 |+||++|+++.+...+|+..++
T Consensus       130 ~~lE~~~G~~r~~ilYl~sGi~G~l~s~~~~~~~~svGASg-----------------AifGLiGa~~~~lil~w~~~~~  192 (278)
T PTZ00101        130 FTLEKNYGIVKIIILYFLTGIYGNILSSSVTYCPIKVGAST-----------------SGMGLLGIVTSELILLWHVIRH  192 (278)
T ss_pred             HHHHHHHChHHHHHHHHHHHHHHHHHHHHHccCCcEEehhH-----------------HHHHHHHHHHHHHHHHHHhhcc
Confidence            46899999999999999999999999999887655555555                 5555888887776677766555


Q ss_pred             hHHHHHHHHHHHHHHHH--Hhc-CchhhHHHHHHHHHHHHHHHHHhhcccccCCccchhhHHHHHHHHHHHHHHHHHHHH
Q psy16470         82 PEQALMKLLTITFILLL--FGL-LPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFVIIFLVVLLL  158 (197)
Q Consensus        82 p~~~l~~l~~~~~i~~~--~g~-~p~i~~~AHlGG~i~G~l~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  158 (197)
                      +.+.+..++.+.++.+.  +++ .|++||+||+||+++|++++.++.++..  + ++++.++....+..+++++.++...
T Consensus       193 ~~~~~~~~i~~~li~~~l~~~~~g~~Id~~aHlGG~i~G~llg~~~~~~l~--~-~~~~~~~~~~~~~~~~~~~~i~~~~  269 (278)
T PTZ00101        193 RERVVFNIIFFSLISFFYYFTFNGSNIDHVGHLGGLLSGISMGILYNSQME--N-KPSWYDHMKMASYACLALLAIVPPI  269 (278)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHHHHHHhhhh--h-cccHHHHHHHHHHHHHHHHHHHhhH
Confidence            54443333333333322  233 4899999999999999999998865432  1 1111122223344445556666666


Q ss_pred             HHhhcCCCCC
Q psy16470        159 LFYLIPIYDC  168 (197)
Q Consensus       159 ~f~~~~~~~C  168 (197)
                      ..|.+| .+|
T Consensus       270 ~~~~~~-~~~  278 (278)
T PTZ00101        270 VLFAVP-RTC  278 (278)
T ss_pred             heeecc-CCC
Confidence            666665 344

>COG0705 Membrane associated serine protease [Amino acid transport and metabolism]

Probab=99.59  E-value=1.2e-14  Score=121.66  Aligned_cols=112  Identities=32%  Similarity=0.418  Sum_probs=81.6

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCcccc-
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLK-   80 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~-   80 (197)
                      +.+|+.+|+.||+.+|+++|+.+++.+..+.|...               .+++||||+++|++|++.......+.... 
T Consensus        96 ~~le~~~G~~~f~~~yl~~gl~~~~~~~~~~~~~~---------------~~~~GASG~i~gllga~~~~~~~~~~~~~~  160 (228)
T COG0705          96 SNLERRLGTLRFLLFYLLSGLLAGLAQVLFGPKGG---------------APSLGASGAIFGLLGAYFLLFPFARILLLF  160 (228)
T ss_pred             HHHHHHhchhHHHHHHHHHHHHHHHHHHHHccccc---------------CcccchhHHHHHHHHHHHHHccccchhhhh
Confidence            57999999999999999999999999998887641               24456677777799998764333222221 


Q ss_pred             --chHHHHHHHHHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHhhccc
Q psy16470         81 --HPEQALMKLLTITFILLLFGLL---PWVDNFAHLFGFLFGFLLSYALLPFV  128 (197)
Q Consensus        81 --~p~~~l~~l~~~~~i~~~~g~~---p~i~~~AHlGG~i~G~l~~~~l~p~~  128 (197)
                        .|......+.+..+.+++.+..   ++|+|+||++|+++|.+++..+.+..
T Consensus       161 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~va~~aHl~G~i~G~l~~~~~~~~~  213 (228)
T COG0705         161 LSLPRPALILILIWLLYSLFSGAGSFGPSVAWSAHLGGLIGGLLLAALLSRKL  213 (228)
T ss_pred             ccCchhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence              3333344445556666665553   37999999999999999999986643

>PRK10907 intramembrane serine protease GlpG; Provisional

Probab=99.56  E-value=3.3e-14  Score=123.30  Aligned_cols=101  Identities=21%  Similarity=0.265  Sum_probs=69.3

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCc-ccc
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWP-LLK   80 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~-~~~   80 (197)
                      +.+|+.+|++|++.+|++|++.|++.+..+.+.         .+         +|+||++||++|.......++.. ...
T Consensus       163 ~~iE~~~G~~~~l~l~l~s~i~~~~~~~~~~~~---------~~---------gGaSGvVygL~g~~~~~~~~~p~~~~~  224 (276)
T PRK10907        163 GAVEKRLGSGKLIVITLISALLSGWVQSKFSGP---------WF---------GGLSGVVYALMGYVWLRGERDPQSGIY  224 (276)
T ss_pred             HHHHHHHChHHHHHHHHHHHHHHHHHHHHHccc---------hh---------hHHHHHHHHHHHHHHHHhccccccchh
Confidence            568999999999999999999999999877431         12         37888888899986543322211 111


Q ss_pred             chHHHHHHHHHHHHHHHH---Hhc-CchhhHHHHHHHHHHHHHHHHHh
Q psy16470         81 HPEQALMKLLTITFILLL---FGL-LPWVDNFAHLFGFLFGFLLSYAL  124 (197)
Q Consensus        81 ~p~~~l~~l~~~~~i~~~---~g~-~p~i~~~AHlGG~i~G~l~~~~l  124 (197)
                      .|.    .++.+.++.+.   .++ .++|||+||+||+++|+++++..
T Consensus       225 lp~----~~~~f~llwl~~g~~~~~g~~Ian~AHlgGli~Gll~g~~~  268 (276)
T PRK10907        225 LPR----GLIAFALLWLVAGYFDLFGMSIANAAHVAGLAVGLAMAFWD  268 (276)
T ss_pred             hhH----HHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHh
Confidence            121    12222222222   232 47899999999999999999775

>PF01694 Rhomboid: Rhomboid family; InterPro: IPR022764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.44  E-value=3.5e-14  Score=109.83  Aligned_cols=109  Identities=34%  Similarity=0.504  Sum_probs=75.0

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccc-cccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCcccc
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYR-ADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLK   80 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~-~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~   80 (197)
                      +.+||++|++|+..+|+++++.+++.+.++.+.. +.+                 |+||+++|++++.......+++..+
T Consensus        34 ~~lE~~~G~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~-----------------G~Sg~~~~l~~~~~~~~~~~~~~~~   96 (145)
T PF01694_consen   34 SLLERRLGSRRFLALYLLSGLLGSLLSLLFSPPNQPYV-----------------GASGAVFGLLGAFLFLYPQNKKRLR   96 (145)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S----------------------SSHHHHHHHHHHHHHHHHCCCCCS-
T ss_pred             hhHhhhccchHHHHHHHHHHHhhhhccccccccccccC-----------------CCcccchHHHHHHHHHHhhccchhh
Confidence            5799999999999999999999999999987765 444                 5555556688888777666654443


Q ss_pred             chHHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHhhcc
Q psy16470         81 HPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPF  127 (197)
Q Consensus        81 ~p~~~l~~l~~~~~i~~~~g~~p~i~~~AHlGG~i~G~l~~~~l~p~  127 (197)
                      .+............+.+..++.|++|+.+|++|+++|++++..+.++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~G~~~G~~~~~~~~~~  143 (145)
T PF01694_consen   97 FIYLALVVPIIVLVIILLLGFIPNISFLGHLGGFLAGLLYGFLILRR  143 (145)
T ss_dssp             --HCCCCCCCCCCCHHHCTSSSSTTTHHHHHHHHHHHHHHHHHHCH-
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHc
Confidence            21111111111223344445579999999999999999999998654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of proteins contain serine peptidases belonging to the MEROPS peptidase family S54 (Rhomboid, clan ST). They are integral membrane proteins related to the Drosophila melanogaster (Fruit fly) rhomboid protein P20350 from SWISSPROT. Members of this family are found in archaea, bacteria and eukaryotes. The D. melanogaster rhomboid protease cleaves type-1 transmembrane domains using a catalytic triad composed of serine, histidine and asparagine contributed by different transmembrane domains. It cleaves the transmembrane proteins Spitz, Gurken and Keren within their transmembrane domains to release a soluble TGFalpha-like growth factor. Cleavage occurs in the Golgi, following translocation of the substrates from the endoplasmic reticulum membrane by Star, another transmembrane protein. The growth factors are then able to activate the epidermal growth factor receptor [, ]. Few substrates of mammalian rhomboid homologues have been determined, but rhomboid-like protein 2 (MEROPS S54.002) has been shown to cleave ephrin B3 []. Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite. In Saccharomyces cerevisiae (Baker's yeast) the Pcp1 (MDM37) protein (MEROPS S54.007) is a mitochondrial endopeptidase required for the activation of cytochrome c peroxidase and for the processing of the mitochondrial dynamin-like protein Mgm1 [, ]. Mutations in Pcp1 result in cells have fragmented mitochondria, which have very few short tubulues []. This entry represents the 6 transmembrane helix rhomboid domain.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....

>KOG2632|consensus

Probab=96.72  E-value=0.0086  Score=51.61  Aligned_cols=105  Identities=20%  Similarity=0.289  Sum_probs=63.5

Q ss_pred             ChhhHHhhc-hhHHHHHHHHHHHHHHHHHHHHhc-----cccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHh
Q psy16470          1 MRDLEKLTG-SFRIAIIYFGSGIGGNLASAIFVP-----YRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLN   74 (197)
Q Consensus         1 ~~~lE~~~G-~~r~l~lYl~sGi~G~l~s~~~~p-----~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~   74 (197)
                      |.+.||.+| +.|++....+.++..+++......     +...+.             -.+|-||..|+.++..-+.. +
T Consensus        80 g~~fE~~~G~t~~~l~~~~llalf~gIl~ll~~~~~~~~d~~~~~-------------~a~G~s~v~Fam~~~~~~~s-p  145 (258)
T KOG2632|consen   80 GSQFERTHGTTVRILMFTVLLALFSGILYLLAYHVFLLSDLVYVE-------------GAIGFSGVLFAMMAVLEVQS-P  145 (258)
T ss_pred             hhHHHhhccceehHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhc-------------ccccccHHHHHHHHHHhhcC-c
Confidence            568999999 999999999999999988877642     111110             12455566555555543321 1


Q ss_pred             cCc-----cccchHHHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHH
Q psy16470         75 CWP-----LLKHPEQALMKLLTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYA  123 (197)
Q Consensus        75 ~~~-----~~~~p~~~l~~l~~~~~i~~~~g~~p~i~~~AHlGG~i~G~l~~~~  123 (197)
                      .++     .+..|.. +..++..++..+   +.|+.|..+|++|+++|...++-
T Consensus       146 ~r~~~~fg~~siP~~-l~Pw~lLi~~~~---lvp~aSFlghl~GllvG~ay~~~  195 (258)
T KOG2632|consen  146 VRSRSVFGLFSIPIV-LAPWALLIATQI---LVPQASFLGHLCGLLVGYAYAFS  195 (258)
T ss_pred             ccchhhcccccccHH-HHHHHHHHHHHH---HccCchHHHHHHHHHHHHHHHHH
Confidence            111     0111211 222222222222   26999999999999999999984

>KOG2980|consensus

Probab=95.47  E-value=0.016  Score=51.07  Aligned_cols=77  Identities=25%  Similarity=0.254  Sum_probs=45.1

Q ss_pred             hhhhcCchhhHHHHHHHHHHHHHhcCccc---cchHHHHHHHHHHHHHHHH-Hhc---CchhhHHHHHHHHHHHHHHHHH
Q psy16470         51 LIVEVGPAGAHFGLLACLIVEVLNCWPLL---KHPEQALMKLLTITFILLL-FGL---LPWVDNFAHLFGFLFGFLLSYA  123 (197)
Q Consensus        51 ~~~~vGASGAi~Gl~ga~~~~~~~~~~~~---~~p~~~l~~l~~~~~i~~~-~g~---~p~i~~~AHlGG~i~G~l~~~~  123 (197)
                      ..+++|||||++++.+.... ++++-+.+   -.|.+.-..+.+-.++... -+.   ..+-|++||++|-+.|...+..
T Consensus       220 ~gp~LGAsGav~ai~a~~~~-lfP~~~~~i~f~~~v~~ga~~~~~~i~~~~~a~~~l~~~~~n~~Ah~~gsl~Gv~va~~  298 (310)
T KOG2980|consen  220 AGPSLGASGAVYAILALDCT-LFPKTTLYILFVFPVPAGAGLAFKAIAAYDFAGLILGWGFFNHAAHLSGSLFGVVVATY  298 (310)
T ss_pred             cccccccchHHHHHHHHHhh-cCcCcceeEEEeecccccchhHHHHHHHhhhcceeeccccchhHhhhcchHHHHHHHHH
Confidence            34679999999999888754 34432221   1121111111111111111 111   2467899999999999999999


Q ss_pred             hhccc
Q psy16470        124 LLPFV  128 (197)
Q Consensus       124 l~p~~  128 (197)
                      ..+++
T Consensus       299 ~~~ri  303 (310)
T KOG2980|consen  299 LWARI  303 (310)
T ss_pred             HHHHH
Confidence            87765

>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins

Probab=82.38  E-value=2.1  Score=31.52  Aligned_cols=31  Identities=23%  Similarity=0.188  Sum_probs=27.7

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHh
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFV   32 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~   32 (197)
                      |.+|+.+|+++++-...+..+..|++.....
T Consensus        36 ~~lE~~WGs~E~lkFi~vv~~~tnl~~~~~~   66 (99)
T PF08551_consen   36 RYLEPIWGSREFLKFILVVNVITNLLTFLLY   66 (99)
T ss_pred             HHHHHhcChHHHHHHHHHHHHHhHHHHHHHH
Confidence            6799999999999999999999998877663

Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].

>COG0705 Membrane associated serine protease [Amino acid transport and metabolism]

Probab=81.50  E-value=3  Score=34.56  Aligned_cols=39  Identities=26%  Similarity=0.329  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHhcCch-hh---HHHHHHHHHHHHHHHHHhhcccc
Q psy16470         90 LTITFILLLFGLLPW-VD---NFAHLFGFLFGFLLSYALLPFVS  129 (197)
Q Consensus        90 ~~~~~i~~~~g~~p~-i~---~~AHlGG~i~G~l~~~~l~p~~~  129 (197)
                      ...+.+....++.+. .+   ..|| .+=++|++.|.++.....
T Consensus       168 ~~~i~~~~~~~~~~~~~~~~~~va~-~aHl~G~i~G~l~~~~~~  210 (228)
T COG0705         168 LILILIWLLYSLFSGAGSFGPSVAW-SAHLGGLIGGLLLAALLS  210 (228)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHH-HHHHHHHHHHHHHHHHHh
Confidence            334444455555433 33   2333 457888888888876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	197
2nr9_A	196	Protein GLPG homolog; intramembrane peptidase, rho	3e-11
2xov_A	181	Rhomboid protease GLPG; membrane protein, hydrolas	7e-11

>2nr9_A Protein GLPG homolog; intramembrane peptidase, rhomboid protease, membrane protein; HET: PA6 PQE; 2.20A {Haemophilus influenzae} SCOP: f.51.1.1 PDB: 3odj_A Length = 196

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 18/127 (14%), Positives = 37/127 (29%), Gaps = 19/127 (14%)

Query: 2   RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAH 61
             +E+  GS ++ ++Y  +                                   G +G  
Sbjct: 78  GMIERTFGSVKLLMLYVVASAITGYVQNYVSGP------------------AFFGLSGVV 119

Query: 62  FGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLLPW-VDNFAHLFGFLFGFLL 120
           + +L  + +       L   PE     LL    +  +  L    + N AH+ G + G + 
Sbjct: 120 YAVLGYVFIRDKLNHHLFDLPEGFFTMLLVGIALGFISPLFGVEMGNAAHISGLIVGLIW 179

Query: 121 SYALLPF 127
            +     
Sbjct: 180 GFIDSKL 186

>2xov_A Rhomboid protease GLPG; membrane protein, hydrolase, intramembrane protease; HET: BNG; 1.65A {Escherichia coli} PDB: 2ic8_A* 2nrf_A 2xtu_A* 2irv_A* 3b45_A* 2o7l_A* 2xow_A* 3txt_A* 2xtv_A* 3b44_A* Length = 181

 Score = 57.3 bits (139), Expect = 7e-11
 Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 19/122 (15%)

Query: 2   RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAH 61
             +EK  GS ++ +I   S +        F                        G +G  
Sbjct: 73  GAVEKRLGSGKLIVITLISALLSGYVQQKFSGP------------------WFGGLSGVV 114

Query: 62  FGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLL-PWVDNFAHLFGFLFGFLL 120
           + L+  + +          + ++ L+    I  +   F L    + N AH+ G   G  +
Sbjct: 115 YALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAM 174

Query: 121 SY 122
           ++
Sbjct: 175 AF 176

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	197
2xov_A	181	Rhomboid protease GLPG; membrane protein, hydrolas	99.66
2nr9_A	196	Protein GLPG homolog; intramembrane peptidase, rho	99.62

>2xov_A Rhomboid protease GLPG; membrane protein, hydrolase, intramembrane protease; HET: BNG; 1.65A {Escherichia coli} PDB: 2ic8_A* 2nrf_A 2xtu_A* 2irv_A* 3b45_A* 2o7l_A* 2xow_A* 3txt_A* 2xtv_A* 3b44_A*

Probab=99.66  E-value=4.9e-16  Score=125.22  Aligned_cols=101  Identities=17%  Similarity=0.160  Sum_probs=69.5

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCcc-cc
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPL-LK   80 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~-~~   80 (197)
                      +.+|+.+|++|++.+|+++++.|++++..+.|.. +                 +||||+++|++++.++...++++. ..
T Consensus        73 ~~~E~~~G~~~fl~~yl~~~i~~~l~~~~~~~~~-~-----------------vGaSGai~gl~g~~~~~~~~~p~~~~~  134 (181)
T 2xov_A           73 GAVEKRLGSGKLIVITLISALLSGYVQQKFSGPW-F-----------------GGLSGVVYALMGYVWLRGERDPQSGIY  134 (181)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCSC-C-----------------CCSHHHHHHHHHHHHHHHHHCGGGSCC
T ss_pred             HHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCC-c-----------------eeHHHHHHHHHHHHHHHHhhCcCceee
Confidence            5789999999999999999999999999987642 3                 455666666888765432222211 11


Q ss_pred             chHHHHHHHHHHHHHHHHHhc----CchhhHHHHHHHHHHHHHHHHHh
Q psy16470         81 HPEQALMKLLTITFILLLFGL----LPWVDNFAHLFGFLFGFLLSYAL  124 (197)
Q Consensus        81 ~p~~~l~~l~~~~~i~~~~g~----~p~i~~~AHlGG~i~G~l~~~~l  124 (197)
                      .|.+..    ...++.+..++    .|++||+||+||+++|++++..+
T Consensus       135 l~~~~~----~~~~~~~~~~~~~~~~~~v~~~aHlgG~l~G~l~~~~~  178 (181)
T 2xov_A          135 LQRGLI----IFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVD  178 (181)
T ss_dssp             CCHHHH----HHHHHHHHHHHTTSSCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             eHHHHH----HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence            232222    12222233333    36999999999999999999876

>2nr9_A Protein GLPG homolog; intramembrane peptidase, rhomboid protease, membrane protein; HET: PA6 PQE; 2.20A {Haemophilus influenzae} SCOP: f.51.1.1 PDB: 3odj_A

Probab=99.62  E-value=1.9e-16  Score=129.20  Aligned_cols=107  Identities=16%  Similarity=0.189  Sum_probs=70.3

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCccccc
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKH   81 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~~   81 (197)
                      +.+|+.+|++|++.+|+++++.|++++..+.|.. +                 +||||++||++|+.+.....+++....
T Consensus        78 ~~lE~~~G~~~~l~~yl~~~~~~~l~~~~~~~~~-~-----------------vGaSGai~gl~g~~~~~~~~~~~~~~~  139 (196)
T 2nr9_A           78 GMIERTFGSVKLLMLYVVASAITGYVQNYVSGPA-F-----------------FGLSGVVYAVLGYVFIRDKLNHHLFDL  139 (196)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCSC-C-----------------CCSHHHHHHHHHHHHHHHHSSTTSCCC
T ss_pred             HHHHHHHChHHHHHHHHHHHHHHHHHHHHhcCCC-e-----------------eeHHHHHHHHHHHHHHHHHhcchhhcc
Confidence            5799999999999999999999999999987643 3                 455666666888765543333222111


Q ss_pred             hHHHHHHHHHHHHHHHHHh-cCchhhHHHHHHHHHHHHHHHHHhhc
Q psy16470         82 PEQALMKLLTITFILLLFG-LLPWVDNFAHLFGFLFGFLLSYALLP  126 (197)
Q Consensus        82 p~~~l~~l~~~~~i~~~~g-~~p~i~~~AHlGG~i~G~l~~~~l~p  126 (197)
                      |.+......+.+++.+... ..+++||+||+||+++|++++..+.+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~aHlgG~l~G~l~~~~~~~  185 (196)
T 2nr9_A          140 PEGFFTMLLVGIALGFISPLFGVEMGNAAHISGLIVGLIWGFIDSK  185 (196)
T ss_dssp             CCSSTTTTTTTTTHHHHSCSSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence            2111111111122222111 13489999999999999999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	197
d2nr9a1	189	GlpG homolog HI0618 {Haemophilus influenzae [TaxId	99.61
d3b45a1	180	GlpG {Escherichia coli [TaxId: 562]}	99.54

>d2nr9a1 f.51.1.1 (A:4-192) GlpG homolog HI0618 {Haemophilus influenzae [TaxId: 727]}

class: Membrane and cell surface proteins and peptides
fold: Rhomboid-like
superfamily: Rhomboid-like
family: Rhomboid-like
domain: GlpG homolog HI0618
species: Haemophilus influenzae [TaxId: 727]

Probab=99.61  E-value=1.8e-16  Score=126.28  Aligned_cols=105  Identities=18%  Similarity=0.217  Sum_probs=74.1

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCccccc
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKH   81 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~~~   81 (197)
                      +.+|+++|++|++.+|+++++.|++++....+. +.                 +||||+++|++++.......+++....
T Consensus        75 ~~~E~~~G~~~~~~~~~~~~~~~~l~~~~~~~~-~~-----------------vGaSG~v~gl~~~~~~~~~~~~~~~~~  136 (189)
T d2nr9a1          75 GMIERTFGSVKLLMLYVVASAITGYVQNYVSGP-AF-----------------FGLSGVVYAVLGYVFIRDKLNHHLFDL  136 (189)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCS-CC-----------------CCSHHHHHHHHHHHHHHHHSSTTSCCC
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-Cc-----------------ccchHHHHHHHHHHHHHHHHhhhHhcc
Confidence            468999999999999999999999998877653 23                 456666666888877766655554433


Q ss_pred             hHHHHHHHHHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHh
Q psy16470         82 PEQALMKLLTITFILLLFGL-LPWVDNFAHLFGFLFGFLLSYAL  124 (197)
Q Consensus        82 p~~~l~~l~~~~~i~~~~g~-~p~i~~~AHlGG~i~G~l~~~~l  124 (197)
                      |.+....++....+.+.... .+++||+||++|+++|++++++.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~aHl~G~l~G~~~g~~~  180 (189)
T d2nr9a1         137 PEGFFTMLLVGIALGFISPLFGVEMGNAAHISGLIVGLIWGFID  180 (189)
T ss_dssp             CCSSTTTTTTTTTHHHHSCSSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Confidence            32222222222222233222 57999999999999999999887

>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Rhomboid-like
superfamily: Rhomboid-like
family: Rhomboid-like
domain: GlpG
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=2.4e-14  Score=112.52  Aligned_cols=104  Identities=17%  Similarity=0.110  Sum_probs=71.5

Q ss_pred             hhhHHhhchhHHHHHHHHHHHHHHHHHHHHhccccccCCchhhhhhhhhhhhhcCchhhHHHHHHHHHHHHHhcCccc-c
Q psy16470          2 RDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLL-K   80 (197)
Q Consensus         2 ~~lE~~~G~~r~l~lYl~sGi~G~l~s~~~~p~~~~vGASgaifGl~g~~~~~vGASGAi~Gl~ga~~~~~~~~~~~~-~   80 (197)
                      +.+||++|++|++.+|+++++.|++.+..+.++ ..                 .|+||+++|+++.......+++... .
T Consensus        73 ~~lE~~~G~~~~~~~~~~~~~~g~l~~~~~~~~-~~-----------------~G~sg~i~~l~~~~~~~~~~~~~~~~~  134 (180)
T d3b45a1          73 GAVEKRLGSGKLIVITLISALLSGYVQQKFSGP-WF-----------------GGLSGVVYALMGYVWLRGERDPQSGIY  134 (180)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCS-CC-----------------CCSHHHHHHHHHHHHHHHHHCGGGSCC
T ss_pred             HHHHHhccchhheeeeeHHHHHHHHHHHHHhcc-cc-----------------ccccchHHHHHHHHHHHhhhcchhHHh
Confidence            579999999999999999999999999998764 23                 3566666668887766544443322 2


Q ss_pred             chHHHHHHHHHHHHHHHHHh-cCchhhHHHHHHHHHHHHHHHHHh
Q psy16470         81 HPEQALMKLLTITFILLLFG-LLPWVDNFAHLFGFLFGFLLSYAL  124 (197)
Q Consensus        81 ~p~~~l~~l~~~~~i~~~~g-~~p~i~~~AHlGG~i~G~l~~~~l  124 (197)
                      .|.. ........++..... ..|++||.||++|+++|++++++.
T Consensus       135 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~~aHlgG~l~G~~~~~~~  178 (180)
T d3b45a1         135 LQRG-LIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVD  178 (180)
T ss_dssp             CCHH-HHHHHHHHHHHHHTTSSCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHH-HHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHH
Confidence            2222 212221122222222 258999999999999999999875