Psyllid ID: psy16510

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MMKIEKDIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGRK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccEEEEEEcccccEEEEEEEEcccccccccccEEEEEEEEEcccccEEEEEEEccccccEEcccccccccccHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccEEEEEEcccccEEEEccccccccccccccEEEEEEEEEEcccccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
MMKIEKDIGALAISFVALFIAVVSaqrgppqyapgqfipiisyqnepnqgdgsyrysyetgngiaaneqgylknpgqkdleaqtaqgqftytapdgtpitvqwfadetgfhasgahlptpppipEAILKSLQqvqvsppgpnrfgrk
Flexible Loop (DISEMBL)
MMKIEKDIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLqqvqvsppgpnrfgrk
Low Complexity Region (SEG)
MMKIEKDIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGRK
Disordered region (IsUnstruct)
******DIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQ*********YRYSYETGNGI***********************QFTYTAPDGTPITVQWFADETGFHA***********************************
Disordered Region (DISOPRED)
*******IGALAISFVALFIAVVSAQRGPP****GQFIPIISYQNEPNQGDGSYRYSYETGNGIAA****************QTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQ**************
Disordered Region (DISEMBL)
MMKIEKDIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGRK
Disordered Region (DISPRO)
*MKIEKDIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSP*********
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMKIEKDIGALAISFVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGRK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q7M4F3	135	Endocuticle structural gl	N/A	N/A	0.707	0.770	0.672	2e-34
Q7M4F2	139	Endocuticle structural gl	N/A	N/A	0.727	0.769	0.629	2e-25
Q7M4F4	184	Endocuticle structural gl	N/A	N/A	0.619	0.494	0.543	7e-19
O02387	143	Larval cuticle protein LC	N/A	N/A	0.653	0.671	0.443	2e-18
O02388	174	Larval cuticle protein LC	N/A	N/A	0.809	0.683	0.413	5e-17
P27779	122	Pupal cuticle protein Edg	no	N/A	0.625	0.754	0.401	5e-17
Q7M4E9	119	Endocuticle structural gl	N/A	N/A	0.700	0.865	0.453	5e-16
P21799	116	Endocuticle structural gl	N/A	N/A	0.707	0.896	0.550	5e-15
Q7M4F1	116	Endocuticle structural gl	N/A	N/A	0.741	0.939	0.535	7e-15
Q8T635	200	Pupal cuticle protein 20	N/A	N/A	0.510	0.375	0.545	1e-14

>sp|Q7M4F3|CUD2_SCHGR Endocuticle structural glycoprotein SgAbd-2 OS=Schistocerca gregaria PE=1 SV=1

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/107 (67%), Positives = 86/107 (80%), Gaps = 3/107 (2%)

Query: 30  PQYAP--GQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQG 87
           P Y+P   Q +PI+ Y NE N  DGSY YSY+TGNGIAA EQGYLKNPGQ+DLEA+  QG
Sbjct: 10  PTYSPPARQQVPILQYSNEVNP-DGSYAYSYQTGNGIAAQEQGYLKNPGQRDLEAENVQG 68

Query: 88  QFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQV 134
            F+YTAPDGTPI++++ ADE GF A GAHLPTPPPIPEAI +SL+ +
Sbjct: 69  TFSYTAPDGTPISLRYVADENGFRAEGAHLPTPPPIPEAIARSLEVI 115

Component of the abdominal endocuticle.
Schistocerca gregaria (taxid: 7010)

>sp|Q7M4F2|CUD8_SCHGR Endocuticle structural glycoprotein SgAbd-8 OS=Schistocerca gregaria PE=1 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           IPII Y NE +  DGSY +SYETGNGIAA+E G L+NPGQKDLEA  AQG F+YTAPDG+
Sbjct: 17  IPIIRYSNEISP-DGSYAWSYETGNGIAADESGALENPGQKDLEAMRAQGSFSYTAPDGS 75

Query: 98  PITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFG 145
           PI+V++ AD  GFH  GAHLPTPPPIP AI ++L  +   P  P   G
Sbjct: 76  PISVRYVADRDGFHPEGAHLPTPPPIPPAIQRALDFIASQPQQPGNNG 123

Component of the abdominal endocuticle.

Schistocerca gregaria (taxid: 7010)

>sp|Q7M4F4|CUD1_SCHGR Endocuticle structural glycoprotein SgAbd-1 OS=Schistocerca gregaria PE=1 SV=1

 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 1/92 (1%)

Query: 40  IISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPI 99
           II  Q +    DGSYR++YET NGIAA+E G LK     + +   AQG ++YTAPDGTPI
Sbjct: 76  IIIKQAKDQANDGSYRWNYETENGIAADETGALKAIAPNE-DGTAAQGFYSYTAPDGTPI 134

Query: 100 TVQWFADETGFHASGAHLPTPPPIPEAILKSL 131
            V + ADE GF A G H P  PPIPEAI ++L
Sbjct: 135 RVTYTADENGFQAQGDHFPVGPPIPEAIQRAL 166

Component of the abdominal endocuticle.

Schistocerca gregaria (taxid: 7010)

>sp|O02387|CU17_BOMMO Larval cuticle protein LCP-17 OS=Bombyx mori GN=LCP17 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 51  DGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGF 110
           +G ++++YETGNGI A  +G +KN    +  A   +G + YT+PDG PI + + ADE G+
Sbjct: 41  EGHFQFNYETGNGIYAQAEGAVKN-VNSEYPAIEVKGAYKYTSPDGQPIDLAYVADENGY 99

Query: 111 HASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGRK 147
              G+HLPTP PIPEAI ++L  ++  PP P+   RK
Sbjct: 100 QPQGSHLPTPHPIPEAIARALAYIEAHPPSPSVVERK 136

Component of the cuticle of the larva of Bombyx mori.

Bombyx mori (taxid: 7091)

>sp|O02388|CU22_BOMMO Larval cuticle protein LCP-22 OS=Bombyx mori GN=LCP22 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 15  FVALFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKN 74
           F+ + I+ V+  R  P+ + G     + + NE N  DGSY Y YET NGIAA EQG  +N
Sbjct: 47  FLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINP-DGSYTYFYETNNGIAAQEQGVPRN 105

Query: 75  PGQKDLEA-QTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQ 133
            G         AQG F++T+P+G PI+V + ADE G+  +G  +PT PP+PE I ++L  
Sbjct: 106 LGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAY 165

Query: 134 V 134
           +
Sbjct: 166 I 166

Component of the cuticle of the larva of Bombyx mori.

Bombyx mori (taxid: 7091)

>sp|P27779|CUP7_DROME Pupal cuticle protein Edg-78E OS=Drosophila melanogaster GN=Edg78E PE=1 SV=1

 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 10/102 (9%)

Query: 40  IISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPI 99
           I S+QN+    +G+Y+Y+YET NGI   E G           A  A+G   Y +P+G  I
Sbjct: 25  IRSFQNDATDAEGNYQYAYETSNGIQIQEAG----------NANGARGAVAYVSPEGEHI 74

Query: 100 TVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGP 141
           ++ + ADE G+H  G HLPTPPP+P  +L++L+ ++  PP P
Sbjct: 75  SLTYTADEEGYHPVGDHLPTPPPVPAYVLRALEYIRTHPPAP 116

Component of the cuticle of the pupa of fruit fly.

Drosophila melanogaster (taxid: 7227)

>sp|Q7M4E9|CUD3_SCHGR Endocuticle structural glycoprotein SgAbd-3 OS=Schistocerca gregaria PE=1 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 5/108 (4%)

Query: 35  GQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKN---PG-QKDLEAQTAQGQFT 90
           G+   I+S  N+ N  DGSYRYS+ET +G  A+++G LK    PG   D   +  +G F+
Sbjct: 9   GKDAVIVSATNDVNF-DGSYRYSFETSDGQRASQEGALKQVSAPGPDGDTLGEAVRGDFS 67

Query: 91  YTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSP 138
           YT   G    +Q+ ADE G+   GAHLPTPPPIPEAI K+L  +   P
Sbjct: 68  YTDDAGNQFAIQYTADENGYVPQGAHLPTPPPIPEAIQKALAYIASQP 115

Component of the abdominal endocuticle.

Schistocerca gregaria (taxid: 7010)

>sp|P21799|CUD4_LOCMI Endocuticle structural glycoprotein ABD-4 OS=Locusta migratoria PE=1 SV=3

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 70/109 (64%), Gaps = 5/109 (4%)

Query: 36  QFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQ--TAQGQFTYTA 93
           + IPIIS QNE    DGSY+++YETGNGI A+E G LK  G K  E     AQG F+YT 
Sbjct: 6   KVIPIIS-QNEVRNPDGSYQWNYETGNGIKADETGTLKK-GSKPDEGDFIVAQGSFSYTG 63

Query: 94  PDGTPITVQWFAD-ETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGP 141
           PDGT   VQ+ AD E GF   GAH PTPPPIP AI ++L  +   PP P
Sbjct: 64  PDGTAYQVQYSADDENGFVPQGAHFPTPPPIPPAIQRALDYLATLPPTP 112

Component of the soft endocuticle of migratory locust.

Locusta migratoria (taxid: 7004)

>sp|Q7M4F1|CUD4_SCHGR Endocuticle structural glycoprotein SgAbd-4 OS=Schistocerca gregaria PE=1 SV=1

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/114 (53%), Positives = 72/114 (63%), Gaps = 5/114 (4%)

Query: 31  QYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQ--TAQGQ 88
           Q  P + IPIIS QNE    DGSY+++YETGNGI A+E G LK  G K  E     AQG 
Sbjct: 1   QAPPDKVIPIIS-QNEVRNPDGSYQWNYETGNGIKADETGTLKK-GSKPDEGDFIVAQGS 58

Query: 89  FTYTAPDGTPITVQWFA-DETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGP 141
           F+YT PDGT  +VQ+ A DE GF   GAH PTPPPIP AI ++L  +   P  P
Sbjct: 59  FSYTGPDGTAYSVQYQADDENGFVPQGAHFPTPPPIPPAIQRALDYLATLPSTP 112

Component of the abdominal endocuticle.

Schistocerca gregaria (taxid: 7010)

>sp|Q8T635|CU20_MANSE Pupal cuticle protein 20 OS=Manduca sexta GN=PCP20 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           IPI S++N  N GDGSY +SYETGNGI+A E G  + PG + L A TA+G F+Y  PDG 
Sbjct: 81  IPITSFENV-NNGDGSYHFSYETGNGISAQESGAPRAPGPEGL-AVTAEGAFSYRTPDGQ 138

Query: 98  PITVQWFADETGFHASG 114
            I + + ADE GFH  G
Sbjct: 139 QIALTYTADENGFHPLG 155

Component of the pupal abdominal endocuticle. May have important role in the larval cuticle structure.

Manduca sexta (taxid: 7130)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
47605413	135	RecName: Full=Endocuticle structural gly	0.707	0.770	0.672	1e-32
354549523	154	cuticular protein RR-1 motif 32 [Anthera	0.673	0.642	0.67	3e-31
290563462	154	cuticular protein RR-1 motif 32 precurso	0.659	0.629	0.673	3e-30
357623617	144	cuticular protein RR-1 motif 32 [Danaus	0.632	0.645	0.691	7e-30
91079658	177	PREDICTED: similar to Cuticular protein	0.693	0.576	0.653	3e-29
389608145	145	cuticular protein PxutCPR32 [Papilio xut	0.632	0.641	0.670	2e-28
91083861	164	PREDICTED: similar to cuticular protein	0.653	0.585	0.670	4e-28
170047480	140	pupal cuticle protein 78E [Culex quinque	0.782	0.821	0.560	2e-26
91079652	332	PREDICTED: similar to Cuticular protein	0.632	0.280	0.621	7e-26
91079650	333	PREDICTED: similar to Cuticular protein	0.632	0.279	0.621	7e-26

>gi|47605413|sp|Q7M4F3.1|CUD2_SCHGR RecName: Full=Endocuticle structural glycoprotein SgAbd-2

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/107 (67%), Positives = 86/107 (80%), Gaps = 3/107 (2%)

Query: 30  PQYAP--GQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQG 87
           P Y+P   Q +PI+ Y NE N  DGSY YSY+TGNGIAA EQGYLKNPGQ+DLEA+  QG
Sbjct: 10  PTYSPPARQQVPILQYSNEVNP-DGSYAYSYQTGNGIAAQEQGYLKNPGQRDLEAENVQG 68

Query: 88  QFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQV 134
            F+YTAPDGTPI++++ ADE GF A GAHLPTPPPIPEAI +SL+ +
Sbjct: 69  TFSYTAPDGTPISLRYVADENGFRAEGAHLPTPPPIPEAIARSLEVI 115

Source: Schistocerca gregaria

Species: Schistocerca gregaria

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|354549523|gb|AER27818.1| cuticular protein RR-1 motif 32 [Antheraea yamamai]

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 79/100 (79%), Gaps = 1/100 (1%)

Query: 36  QFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPD 95
           + IPII    E N  DGSY+YSYETGNGIAA EQGYLKNPG KD EAQ AQG F+YT+P+
Sbjct: 31  EIIPIIKQTQEINV-DGSYQYSYETGNGIAAQEQGYLKNPGIKDAEAQVAQGSFSYTSPE 89

Query: 96  GTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQ 135
           G P+ + + ADE GF A GAHLPTPPPIPEAIL++LQ ++
Sbjct: 90  GVPVVLTYTADENGFRAEGAHLPTPPPIPEAILRALQYIE 129

Source: Antheraea yamamai

Species: Antheraea yamamai

Genus: Antheraea

Family: Saturniidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|290563462|ref|NP_001166719.1| cuticular protein RR-1 motif 32 precursor [Bombyx mori] gi|223671166|tpd|FAA00535.1| TPA: putative cuticle protein [Bombyx mori]

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 79/98 (80%), Gaps = 1/98 (1%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           IPI+S Q++    DGSY++SYETGNGIAA EQGYLKN G KD EAQ AQG FTYT+P+G 
Sbjct: 32  IPILS-QSQDVNFDGSYQFSYETGNGIAAQEQGYLKNAGAKDAEAQVAQGSFTYTSPEGI 90

Query: 98  PITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQ 135
           PI+V + ADE GF   GAHLPTPPPIPEAIL++LQ ++
Sbjct: 91  PISVSYVADENGFRPEGAHLPTPPPIPEAILRALQYIE 128

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623617|gb|EHJ74702.1| cuticular protein RR-1 motif 32 [Danaus plexippus]

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 76/94 (80%), Gaps = 1/94 (1%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           IPI+  QN+    DGSY +SYETGNGI A EQGYLKNPG KD EAQ AQG F+YT+P+G 
Sbjct: 33  IPILR-QNQEINPDGSYSFSYETGNGINAQEQGYLKNPGIKDAEAQVAQGSFSYTSPEGI 91

Query: 98  PITVQWFADETGFHASGAHLPTPPPIPEAILKSL 131
           PI V+++ADETGFHA GAHLP PPPIPEAI ++L
Sbjct: 92  PINVKYYADETGFHAEGAHLPVPPPIPEAIARAL 125

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079658|ref|XP_968739.1| PREDICTED: similar to Cuticular protein 65Az CG12330-PA [Tribolium castaneum] gi|270004481|gb|EFA00929.1| hypothetical protein TcasGA2_TC003835 [Tribolium castaneum]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 2/104 (1%)

Query: 33  APGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYT 92
           +PG  IPI+  +N  N GDGSY ++YETGNGIAA+E+G LKN G K+ EAQ+A G FTYT
Sbjct: 46  SPGADIPILKLENV-NNGDGSYNWAYETGNGIAADERGQLKNAGSKN-EAQSASGSFTYT 103

Query: 93  APDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQV 136
           APDG  ITV + ADE GF   G+HLPTPPPIPEAILKSLQQ++ 
Sbjct: 104 APDGQKITVLYIADENGFQPQGSHLPTPPPIPEAILKSLQQIKA 147

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608145|dbj|BAM17684.1| cuticular protein PxutCPR32 [Papilio xuthus]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 73/94 (77%), Gaps = 1/94 (1%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           IPI+    E N  DG+Y+YSYETGNGIAA EQGYLKN G KD EAQ AQG ++YT+P+G 
Sbjct: 32  IPILRQTQEVN-FDGTYQYSYETGNGIAAQEQGYLKNAGVKDAEAQVAQGSYSYTSPEGI 90

Query: 98  PITVQWFADETGFHASGAHLPTPPPIPEAILKSL 131
           PI V + ADE GF A GAHLPTPPPIPEAI ++L
Sbjct: 91  PIAVSYIADENGFRAEGAHLPTPPPIPEAIARAL 124

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91083861|ref|XP_974125.1| PREDICTED: similar to cuticular protein 80, RR-1 family (AGAP009878-PA) [Tribolium castaneum] gi|270006758|gb|EFA03206.1| hypothetical protein TcasGA2_TC013126 [Tribolium castaneum]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 1/97 (1%)

Query: 35  GQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAP 94
           G+FIPI+S  NE N  DGS+ YSY TG+G  A  QGYLKN G KD EA+  QG ++YTAP
Sbjct: 34  GKFIPIVSETNEINP-DGSFSYSYATGDGQQAQAQGYLKNAGVKDQEAEVIQGSYSYTAP 92

Query: 95  DGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSL 131
           DGTPIT+ + ADE GF A GAHLPTPPPIPEAI KSL
Sbjct: 93  DGTPITITYIADENGFRAEGAHLPTPPPIPEAIQKSL 129

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047480|ref|XP_001851247.1| pupal cuticle protein 78E [Culex quinquefasciatus] gi|167869920|gb|EDS33303.1| pupal cuticle protein 78E [Culex quinquefasciatus]

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 31  QYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFT 90
           Q AP  F+PI SY N+ +  DGSY Y Y TG+G      GYLKNPG KDLEAQ+ QG ++
Sbjct: 9   QGAPRPFVPITSYNNDVS-FDGSYSYGYTTGDGQHQQASGYLKNPGLKDLEAQSVQGSYS 67

Query: 91  YTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGR 146
           YT+P+G  ITV + ADE GF A GAHLPTPPPIPEAI KSL  +  + P   +F +
Sbjct: 68  YTSPEGQLITVTYIADENGFRAEGAHLPTPPPIPEAIQKSLALIAATQPVSQKFSQ 123

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079652|ref|XP_968515.1| PREDICTED: similar to Cuticular protein 49Aa CG30045-PB [Tribolium castaneum] gi|270004477|gb|EFA00925.1| hypothetical protein TcasGA2_TC003831 [Tribolium castaneum]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           +PI+ ++N  N GDG+Y ++YETG+G+ A E+GYLKN G +D EAQ AQG F+YTAPDG 
Sbjct: 103 VPILRFENNVN-GDGTYNFAYETGDGVQAQEEGYLKNAGSQD-EAQAAQGSFSYTAPDGQ 160

Query: 98  PITVQWFADETGFHASGAHLPTPPPIPEAILKSLQ 132
            I++ + ADE GF   G HLPTPPPIPEAILKSLQ
Sbjct: 161 QISLTYTADENGFQPQGEHLPTPPPIPEAILKSLQ 195

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079650|ref|XP_968434.1| PREDICTED: similar to Cuticular protein 49Aa CG30045-PB [Tribolium castaneum] gi|270004476|gb|EFA00924.1| hypothetical protein TcasGA2_TC003830 [Tribolium castaneum]

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)

Query: 38  IPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGT 97
           +PI+ ++N  N GDG+Y ++YETG+G+ A E+GYLKN G +D EAQ AQG F+YTAPDG 
Sbjct: 103 VPILRFENNVN-GDGTYNFAYETGDGVQAQEEGYLKNAGSQD-EAQAAQGSFSYTAPDGQ 160

Query: 98  PITVQWFADETGFHASGAHLPTPPPIPEAILKSLQ 132
            I++ + ADE GF   G HLPTPPPIPEAILKSLQ
Sbjct: 161 QISLTYTADENGFQPQGEHLPTPPPIPEAILKSLQ 195

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
FB|FBgn0050045	144	Cpr49Aa "Cuticular protein 49A	0.863	0.881	0.529	6.9e-31
FB|FBgn0035686	239	Cpr65Az "Cuticular protein 65A	0.673	0.414	0.55	1.4e-25
FB|FBgn0033602	369	Cpr47Ee "Cuticular protein 47E	0.612	0.243	0.489	8.6e-25
FB|FBgn0033603	610	Cpr47Ef "Cuticular protein 47E	0.734	0.177	0.517	3.1e-24
FB|FBgn0033597	135	Cpr47Ea "Cuticular protein 47E	0.789	0.859	0.470	4.2e-24
FB|FBgn0033731	190	Cpr49Ah "Cuticular protein 49A	0.659	0.510	0.479	2.7e-20
FB|FBgn0033728	134	Cpr49Ae "Cuticular protein 49A	0.843	0.925	0.453	3.5e-20
FB|FBgn0000551	122	Edg78E "Ecdysone-dependent gen	0.625	0.754	0.401	5.8e-18
FB|FBgn0036110	122	Cpr67Fb "Cuticular protein 67F	0.585	0.704	0.468	1.6e-17
FB|FBgn0035737	127	Cpr65Ec "Cuticular protein 65E	0.639	0.740	0.432	3.2e-17

FB|FBgn0050045 Cpr49Aa "Cuticular protein 49Aa" [Drosophila melanogaster (taxid:7227)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 71/134 (52%), Positives = 88/134 (65%)

Query:    13 ISFVALFIA--VVSAQRGPPQY---APGQFIPIISYQNEPNQGDGSYRYSYETGNGIAAN 67
             + +  LFIA  ++S  +  PQ    APG+ IPII  + E N  DGSY+Y YETGNGI A 
Sbjct:     1 MQYTLLFIAALLLSLAQARPQVRGQAPGEPIPIIRQEQEVNF-DGSYKYLYETGNGINAE 59

Query:    68 EQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAI 127
             E+GYLKNPG  D   Q AQG F+YT+P+G PI + + ADE GF   G HLPTPPPIP AI
Sbjct:    60 EEGYLKNPGT-DNAGQVAQGSFSYTSPEGIPIRITYLADENGFQPQGDHLPTPPPIPPAI 118

Query:   128 LKSLQQVQVSPPGP 141
              K+L  +  +PP P
Sbjct:   119 QKALAYLATAPPPP 132

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0035686 Cpr65Az "Cuticular protein 65Az" [Drosophila melanogaster (taxid:7227)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 55/100 (55%), Positives = 71/100 (71%)

Query:    35 GQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAP 94
             G+ IPII  +++ N  DGSY Y YETGNGI A E GYLKN G +  EAQTA+G F+YT+P
Sbjct:   111 GEDIPIIKLESKVNT-DGSYMYEYETGNGIKAEEMGYLKNAGVEGAEAQTAEGSFSYTSP 169

Query:    95 DGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQV 134
             +G  I++ + ADE GF   G HLPTPPPIP  I ++L ++
Sbjct:   170 EGQEISLTYIADENGFQPQGDHLPTPPPIPIEIQEALDKL 209

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0033602 Cpr47Ee "Cuticular protein 47Ee" [Drosophila melanogaster (taxid:7227)]

 Score = 241 (89.9 bits), Expect = 8.6e-25, Sum P(3) = 8.6e-25
 Identities = 45/92 (48%), Positives = 62/92 (67%)

Query:    31 QYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKD-LEAQTAQGQF 89
             QY    ++PI +YQNE N  DGS+ Y Y + +G  A  QGY+KN G  + +EAQ  QG +
Sbjct:    98 QYQQQNYVPITAYQNELNL-DGSFSYGYSSADGTTAQAQGYVKNLGYGEGVEAQVIQGSY 156

Query:    90 TYTAPDGTPITVQWFADETGFHASGAHLPTPP 121
             +YT+P+GTPITV++ ADE GF A G  +P+ P
Sbjct:   157 SYTSPEGTPITVRYIADENGFRAEGTGIPSSP 188

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0033603 Cpr47Ef "Cuticular protein 47Ef" [Drosophila melanogaster (taxid:7227)]

 Score = 285 (105.4 bits), Expect = 3.1e-24, P = 3.1e-24
 Identities = 59/114 (51%), Positives = 76/114 (66%)

Query:    29 PPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQ 88
             PP   P   IPI+S+ NE N GDG+YR+SYETGNGI A E+G +KN G ++ E  +  G 
Sbjct:   125 PPTSGPP--IPILSFVNE-NDGDGNYRFSYETGNGIKAQEEGTVKNKGSEN-EIPSVMGS 180

Query:    89 FTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEAILKSL--QQVQVSPPG 140
             ++YT P+G  + + + ADE GF  SG  LPTPPPIPEAI KSL  Q + + P G
Sbjct:   181 YSYTNPEGELVEIMYTADENGFVPSGNALPTPPPIPEAIAKSLAAQGISILPGG 234

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0033597 Cpr47Ea "Cuticular protein 47Ea" [Drosophila melanogaster (taxid:7227)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 56/119 (47%), Positives = 72/119 (60%)

Query:    10 ALAISFVALFIAVVSAQRG--PPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAAN 67
             AL ++   L       QRG  PP+        +I  QN     DGSY+Y+YET NGI A+
Sbjct:    10 ALVLALCCLSFIQAQPQRGLPPPRGNSFDANAVILKQNFDLNPDGSYQYNYETSNGIRAD 69

Query:    68 EQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGFHASGAHLPTPPPIPEA 126
             E GYLKNPG + +EAQ  QG ++YT PDG   T+ + ADE G+ A GAH+PTPPP+  A
Sbjct:    70 EAGYLKNPGSQ-IEAQVMQGSYSYTGPDGVVYTITYIADENGYRAEGAHIPTPPPVRAA 127

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0033731 Cpr49Ah "Cuticular protein 49Ah" [Drosophila melanogaster (taxid:7227)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 47/98 (47%), Positives = 61/98 (62%)

Query:    37 FIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDG 96
             +IPII Y  E +  DGSY+  YETGN I   E G+LK+            GQ++Y +P+G
Sbjct:    50 WIPIIKYNKEQSD-DGSYKTEYETGNSIIHEETGFLKDFDTNPNGVLVQHGQYSYQSPEG 108

Query:    97 TPITVQWFADETGFHASGAHLPTPPPIPEAILKSLQQV 134
             T + VQ+ ADE GF A+G H+PTPP IPE I K L Q+
Sbjct:   109 TLVNVQYTADENGFRATGDHIPTPPAIPEEIQKGLDQI 146

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0033728 Cpr49Ae "Cuticular protein 49Ae" [Drosophila melanogaster (taxid:7227)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 58/128 (45%), Positives = 73/128 (57%)

Query:    18 LFIAVVSAQRGPPQYAPGQFIPIISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQ 77
             L  A++S  +  PQ A  + I IIS Q    + DGSY Y+YET NGI A E G LK    
Sbjct:     9 LATALMSCCQAAPQKAE-EPIAIIS-QESNIEPDGSYNYAYETANGIKAEETGTLKKATS 66

Query:    78 KDL-EAQTAQGQFTYTAPDGTPITVQWFAD-ETGFHASGAHLPTPPPIPEAILKSLQQVQ 135
              D  +   A+G  +YT+P+G  IT+ + AD E GF   G HLPTPPPIP AI K+L  + 
Sbjct:    67 PDSSDVIIARGSVSYTSPEGNLITLNYSADDENGFQPQGDHLPTPPPIPPAIQKALDYLL 126

Query:   136 VSPPGPNR 143
               PP   R
Sbjct:   127 SLPPAKRR 134

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0000551 Edg78E "Ecdysone-dependent gene 78E" [Drosophila melanogaster (taxid:7227)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 41/102 (40%), Positives = 61/102 (59%)

Query:    40 IISYQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPI 99
             I S+QN+    +G+Y+Y+YET NGI   E G           A  A+G   Y +P+G  I
Sbjct:    25 IRSFQNDATDAEGNYQYAYETSNGIQIQEAG----------NANGARGAVAYVSPEGEHI 74

Query:   100 TVQWFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGP 141
             ++ + ADE G+H  G HLPTPPP+P  +L++L+ ++  PP P
Sbjct:    75 SLTYTADEEGYHPVGDHLPTPPPVPAYVLRALEYIRTHPPAP 116

GO:0008011 "structural constituent of pupal chitin-based cuticle" evidence=NAS;TAS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0036110 Cpr67Fb "Cuticular protein 67Fb" [Drosophila melanogaster (taxid:7227)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 45/96 (46%), Positives = 58/96 (60%)

Query:    43 YQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ 102
             Y+NE    DGSY + Y T NGI A E G         +    A G  +Y APDGTPI ++
Sbjct:    29 YRNEIKP-DGSYSWEYGTSNGIDAQESG---------VGGVQAAGSVSYAAPDGTPIQLE 78

Query:   103 WFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSP 138
             + ADE G+  +GAHLPTPPPIP+ ILK+L  ++  P
Sbjct:    79 YTADENGYRPTGAHLPTPPPIPDYILKALAYIEAHP 114

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

GO:0032504 "multicellular organism reproduction" evidence=IEP

GO:0005615 "extracellular space" evidence=IDA

FB|FBgn0035737 Cpr65Ec "Cuticular protein 65Ec" [Drosophila melanogaster (taxid:7227)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 45/104 (43%), Positives = 61/104 (58%)

Query:    43 YQNEPNQGDGSYRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ 102
             Y+++  + DGSY Y Y+T NGIA  E G         +    A G   Y APDG  I + 
Sbjct:    31 YKSDLKE-DGSYAYQYQTSNGIAGQESG---------VGGYYASGSNAYYAPDGQLIQLT 80

Query:   103 WFADETGFHASGAHLPTPPPIPEAILKSLQQVQVSPPGPNRFGR 146
             + AD  G+H +GAHLPTPPPIP +ILKSL+ ++  P   +R G+
Sbjct:    81 YTADSNGYHPAGAHLPTPPPIPASILKSLEYIRTHPQQESRQGQ 124

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	147
pfam00379	51	pfam00379, Chitin_bind_4, Insect cuticle protein	1e-12

>gnl|CDD|215886 pfam00379, Chitin_bind_4, Insect cuticle protein

 Score = 58.0 bits (141), Expect = 1e-12
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 54  YRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGF 110
           Y + YET +G    E+G        + +    +G ++Y  PDG   TV + ADE GF
Sbjct: 1   YSFGYETSDG-KTQEEGRGT-----EDDGGVVKGSYSYVDPDGKLRTVTYVADENGF 51

Many insect cuticular proteins include a 35-36 amino acid motif known as the R&R consensus. The extensive conservation of this region led to the suggestion that it functions to bind chitin. Provocatively, it has no sequence similarity to the well-known cysteine-containing chitin-binding domain found in chitinases and some peritrophic membrane proteins. Chitin binding has been shown experimentally for this region. Thus arthropods have two distinct classes of chitin binding proteins, those with the chitin-binding domain found in lectins, chitinases and peritrophic membranes (cysCBD) and those with the cuticular protein chitin-binding domain (non-cysCBD). Length = 51

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PF00379	52	Chitin_bind_4: Insect cuticle protein; InterPro: I	99.7
PF06004	50	DUF903: Bacterial protein of unknown function (DUF	89.23

>PF00379 Chitin_bind_4: Insect cuticle protein; InterPro: IPR000618 Insect cuticle is composed of proteins and chitin

Probab=99.70  E-value=4.7e-17  Score=103.92  Aligned_cols=52  Identities=42%  Similarity=0.876  Sum_probs=46.1

Q ss_pred             eeEEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEEEEcCCCCc
Q psy16510         54 YRYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQWFADETGF  110 (147)
Q Consensus        54 Y~~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~Y~ADe~Gf  110 (147)
                      |+|+|+++|| .++|+|.   .++++ ..++|+|+|+|++|||+.++|+|+||++||
T Consensus         1 Y~f~Y~~~dg-~~~e~~~---~~~~~-~~~~v~GsY~y~~pdG~~~~V~Y~Ad~~Gf   52 (52)
T PF00379_consen    1 YSFGYETSDG-SRQEEGR---PETED-EGGVVRGSYSYIDPDGQTRTVTYVADENGF   52 (52)
T ss_pred             CeeEeEcCCC-CEEEEEE---cccCC-CCCEEEEEEEEECCCCCEEEEEEECCCCCC
Confidence            7899999999 8888876   23334 689999999999999999999999999998

The cuticular proteins seem to be specific to the type of cuticle (flexible or stiff) that occur at stages of the insect development. The proteins found in the flexible cuticle of larva and pupa of different insects share a conserved C-terminal section [] such a region is also found in the soft endocuticle of adults insects [] as well as in other cuticular proteins including in arachnids []. In addition, cuticular proteins share hydrophobic regions dominated by tetrapeptide repeats (A-A-P-A/V), which are presumed to be functionally important [, ]. Many insect cuticle proteins also include a 35-36 amino acid motif known as the R and R consensus. An extended form of this motif has been shown [] to bind chitin. It has no sequence similiarity to the cysteine-containing chitin-binding domain of chitinases and some peritrophic membrane proteins, suggesting that arthropods have two distinct classes of chitin-binding proteins, those with the chitin-binding domains found in lectins, chitinases and peritrophic membranes (cysCBD), and those with the type of chitin-binding domains found in cuticular proteins (non-cysCBD) []. The cuticle protein signature has been found in locust cuticle proteins 7 (LM-7), 8 (LM-8), 19 (LM-19) and endocuticle structural glycoprotein ABD-4; Hyalophora cecropia (Cecropia moth) cuticle proteins 12 and 66; Drosophila melanogaster (Fruit fly) larval cuticles proteins I, II, III and IV (LCP1 to LCP4); drosophila pupal cuticle proteins PCP, EDG-78E and EDG-84E; Manduca sexta (Tobacco hawkmoth) cuticle protein LCP-14; Tenebrio molitor (Yellow mealworm) cuticle proteins ACP-20, A1A, A2B and A3A; and Araneus diadematus (Spider) cuticle proteins ACP 11.9, ACP 12.4, ACP 12.6, ACP 15.5 and ACP 15.7.; GO: 0042302 structural constituent of cuticle

>PF06004 DUF903: Bacterial protein of unknown function (DUF903); InterPro: IPR010305 This family consists of several small bacterial proteins several of which are classified as putative lipoproteins

Probab=89.23  E-value=1.2  Score=28.28  Aligned_cols=39  Identities=26%  Similarity=0.453  Sum_probs=28.9

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||....-.|..+        .-.-.|.|+|.+.+|+.+.++
T Consensus         2 yvi~t~dG~~i~t~gkP~--------~D~~tG~~~y~D~~G~~~qIn   40 (50)
T PF06004_consen    2 YVITTNDGRTIVTDGKPK--------YDKDTGMYSYTDADGKEQQIN   40 (50)
T ss_dssp             EEEEETTSEEEEESSEEE--------EETTTTEEEEEBTTS-EEEEE
T ss_pred             cEEEeCCCcEEEeCCCcc--------ccCCCCcEEEECCCCCEEEEc
Confidence            345678888877777764        234579999999999988875

The function of this family is unknown.; PDB: 2RB6_B 3BDU_F 2RA2_F 2RD1_C 3FIF_H 2JN0_A 2K57_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
2k57_A	61	Putative lipoprotein; structural genomics, PSI-2,	85.95
2rd1_A	62	Putative outer membrane lipoprotein; X-RAY, NESG,	85.76
2rb6_A	61	Uncharacterized protein; NESG, Q8EI81_sheon, struc	85.09
2ra2_A	64	Putative lipoprotein; X-RAY, NESG, STR88A, Q7CPV8,	83.41
3bdu_A	62	Putative lipoprotein; X_RAY, NESG, Q6D8G1, structu	82.47
2jn0_A	61	Hypothetical lipoprotein YGDR; solution structure,	82.3

>2k57_A Putative lipoprotein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pseudomonas syringae PV} SCOP: b.38.1.6

Probab=85.95  E-value=1.4  Score=28.28  Aligned_cols=39  Identities=13%  Similarity=0.207  Sum_probs=28.9

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||....-.|..+        .-.-.|.|+|.|.+|+.++++
T Consensus         5 yvitt~DG~~IvT~gKP~--------~D~dTGmysY~D~~G~~~qIn   43 (61)
T 2k57_A            5 TVITLNDGREIQAVDTPK--------YDEESGFYEFKQLDGKQTRIN   43 (61)
T ss_dssp             EEEEESSSCEEEESSCCE--------ECTTTCEEEEEBTTSCEEEEE
T ss_pred             eEEEeCCCcEEEcCCCcc--------ccCCCCCEEEEcCCCCEEEEc
Confidence            444677888777776654        234579999999999988875

>2rd1_A Putative outer membrane lipoprotein; X-RAY, NESG, Q7CQI7, STR87A, structural genomics, PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium LT2} SCOP: b.38.1.6

Probab=85.76  E-value=1.5  Score=28.26  Aligned_cols=40  Identities=25%  Similarity=0.385  Sum_probs=29.7

Q ss_pred             eEEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         55 RYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        55 ~~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      .|--.+.||....-.|..+        .-.-.|.|+|.+.+|+.++++
T Consensus         4 ~yvitt~DG~~IvT~gKP~--------~D~dTGm~sY~D~~G~~~qIn   43 (62)
T 2rd1_A            4 NYVMTTKNGQTIVTQGKPQ--------LDKETGMTSYTDQEGNQREIN   43 (62)
T ss_dssp             EEEEEETTSCEEEEESCCE--------EETTTTEEEEECTTSCEEEEE
T ss_pred             ceEEEeCCCcEEEcCCCcc--------eeCCCCCEEEEcCCCCEEEEc
Confidence            3445678888877777653        234579999999999988875

>2rb6_A Uncharacterized protein; NESG, Q8EI81_sheon, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.50A {Shewanella oneidensis} SCOP: b.38.1.6

Probab=85.09  E-value=1.7  Score=27.90  Aligned_cols=39  Identities=21%  Similarity=0.394  Sum_probs=28.7

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||....-.|..+        ...-.|.|+|.|.+|+.+.++
T Consensus         5 yvitT~DG~~IvT~GKP~--------~D~dTGm~sY~D~~G~~~qIn   43 (61)
T 2rb6_A            5 YIMSTKDGKMITSDSKPK--------LDKTTGMYLYYDEDGREVMIK   43 (61)
T ss_dssp             EEEEETTSCEEEESSCCE--------EETTTTEEEEECTTSCEEEEE
T ss_pred             EEEEeCCCcEEEcCCCcc--------ccCCCCCEEEEcCCCCEEEEc
Confidence            444677888776666643        234579999999999988775

>2ra2_A Putative lipoprotein; X-RAY, NESG, STR88A, Q7CPV8, structural genomics, PSI-2, protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.38.1.6

Probab=83.41  E-value=1.2  Score=28.90  Aligned_cols=39  Identities=18%  Similarity=0.405  Sum_probs=28.4

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||....-.|..+        .-.-.|.|+|.|.+|+.++++
T Consensus         6 yVitt~DG~~IvT~GKP~--------~D~dTGm~sY~D~~G~~~qIn   44 (64)
T 2ra2_A            6 YVMHTNDGRSIVTDGKPQ--------TDNDTGMISYKDANGNKQQIN   44 (64)
T ss_dssp             EEEEETTSCEEECSSCCE--------ECTTTCSEEEECTTSCEEEEC
T ss_pred             EEEEeCCCcEEEcCCCcc--------ccCCCCCEEEEcCCCCEEEEc
Confidence            445678888776666643        234579999999999988764

>3bdu_A Putative lipoprotein; X_RAY, NESG, Q6D8G1, structural genomics, PSI-2, protein structure initiative; 1.90A {Pectobacterium atrosepticum SCRI1043} SCOP: b.38.1.6

Probab=82.47  E-value=1.3  Score=28.54  Aligned_cols=39  Identities=23%  Similarity=0.395  Sum_probs=28.9

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||....-.|..+        ...-.|.|+|.|.+|+.++++
T Consensus         5 yvitt~DG~~IvT~gKP~--------~D~dTGmysY~D~~G~~~qIn   43 (62)
T 3bdu_A            5 YVLHTNDGRTIVAEGKPK--------VDDETGMISYTDAYGQQQQIN   43 (62)
T ss_dssp             EEEEETTSCEEEEESCCE--------ECTTTSSEEEEBTTSCEEEEC
T ss_pred             eEEEECCCcEEEcCCCcc--------eeCCCCCEEEEcCCCCEEEEc
Confidence            445678888877777654        234579999999999988764

>2jn0_A Hypothetical lipoprotein YGDR; solution structure, PSI-2 target, structural genomics, protein structure initiative; NMR {Escherichia coli} SCOP: b.38.1.6 PDB: 3fif_A

Probab=82.30  E-value=1.7  Score=27.84  Aligned_cols=39  Identities=18%  Similarity=0.361  Sum_probs=27.9

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||....-.|..+        ...-.|.|+|.|.+|+.++++
T Consensus         5 yvitT~DG~~IvT~GKP~--------~D~dTGm~sY~D~~G~~~qIn   43 (61)
T 2jn0_A            5 YVMATKDGRMILTDGKPE--------IDDDTGLVSYHDQQGNAMQIN   43 (61)
T ss_dssp             CEEEETTSCEEEBCCCCE--------EETTTTEEEEEBTTSCEEEEE
T ss_pred             EEEEeCCCcEEEcCCCcc--------ccCCCCCEEEEcCCCCEEEEc
Confidence            334577787766666543        234579999999999988875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d2rd1a1	52	Putative outer membrane lipoprotein STM1585 {Salmo	82.85
d2rb6a1	52	Uncharacterized protein SO0963 {Shewanella oneiden	82.45
d2ra2a1	53	Uncharacterized protein YgdI {Salmonella typhimuri	80.89

>d2rd1a1 b.38.1.6 (A:22-73) Putative outer membrane lipoprotein STM1585 {Salmonella typhimurium [TaxId: 90371]}

class: All beta proteins
fold: Sm-like fold
superfamily: Sm-like ribonucleoproteins
family: YgdI/YgdR-like
domain: Putative outer membrane lipoprotein STM1585
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.85  E-value=1.2  Score=26.25  Aligned_cols=39  Identities=26%  Similarity=0.392  Sum_probs=29.0

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||......|..+        ...-.|.|+|.+.+|+..+++
T Consensus         3 yvm~t~dGr~I~t~gKP~--------~D~dTGm~sY~d~~G~~~qIN   41 (52)
T d2rd1a1           3 YVMTTKNGQTIVTQGKPQ--------LDKETGMTSYTDQEGNQREIN   41 (52)
T ss_dssp             EEEEETTSCEEEEESCCE--------EETTTTEEEEECTTSCEEEEE
T ss_pred             eEEEeCCCcEEEcCCCcc--------ccCCCCCEEEEcCCCCEEEeC
Confidence            455678888777777653        233479999999999988764

>d2rb6a1 b.38.1.6 (A:25-76) Uncharacterized protein SO0963 {Shewanella oneidensis [TaxId: 70863]}

class: All beta proteins
fold: Sm-like fold
superfamily: Sm-like ribonucleoproteins
family: YgdI/YgdR-like
domain: Uncharacterized protein SO0963
species: Shewanella oneidensis [TaxId: 70863]

Probab=82.45  E-value=1.3  Score=25.95  Aligned_cols=40  Identities=20%  Similarity=0.397  Sum_probs=29.5

Q ss_pred             eEEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         55 RYSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        55 ~~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      .|--.+.||......|..+        ...-.|.|+|.+.+|+...++
T Consensus         3 ~yvm~t~dG~~i~T~gKP~--------~D~dtG~~~y~d~~G~~~~In   42 (52)
T d2rb6a1           3 QYIMSTKDGKMITSDSKPK--------LDKTTGMYLYYDEDGREVMIK   42 (52)
T ss_dssp             EEEEEETTSCEEEESSCCE--------EETTTTEEEEECTTSCEEEEE
T ss_pred             ceEEEeCCCcEEEeCCCcc--------ccCCCCcEEEECCCCCEEEEc
Confidence            3445678888777777653        334579999999999988764

>d2ra2a1 b.38.1.6 (A:4-56) Uncharacterized protein YgdI {Salmonella typhimurium [TaxId: 90371]}

class: All beta proteins
fold: Sm-like fold
superfamily: Sm-like ribonucleoproteins
family: YgdI/YgdR-like
domain: Uncharacterized protein YgdI
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.89  E-value=0.81  Score=27.11  Aligned_cols=39  Identities=18%  Similarity=0.405  Sum_probs=28.8

Q ss_pred             EEEeeCCceeeeecceecCCCCCcccccceeeEEEEECCCCcEEEEE
Q psy16510         56 YSYETGNGIAANEQGYLKNPGQKDLEAQTAQGQFTYTAPDGTPITVQ  102 (147)
Q Consensus        56 ~~Ye~~dG~~~~E~G~~k~~g~~~~~~~~v~GsYsy~~pdG~~~~V~  102 (147)
                      |--.+.||......|..+        ...-.|.|||.+.+|+..+++
T Consensus         3 yvm~t~DG~~IvT~gKP~--------~D~dTG~~sY~d~~G~~~qIn   41 (53)
T d2ra2a1           3 YVMHTNDGRSIVTDGKPQ--------TDNDTGMISYKDANGNKQQIN   41 (53)
T ss_dssp             EEEEETTSCEEECSSCCE--------ECTTTCSEEEECTTSCEEEEC
T ss_pred             eEEEecCCcEEEeCCCcc--------ccCCCCCEEEEcCCCCEEEec
Confidence            445778888877777654        233479999999999987763