Psyllid ID: psy16524
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 453 | ||||||
| 416656 | 407 | RecName: Full=Arrestin homolog gi|298756 | 0.849 | 0.945 | 0.664 | 1e-169 | |
| 340720116 | 406 | PREDICTED: arrestin homolog isoform 1 [B | 0.847 | 0.945 | 0.651 | 1e-165 | |
| 350408253 | 406 | PREDICTED: arrestin homolog isoform 1 [B | 0.847 | 0.945 | 0.651 | 1e-164 | |
| 383847092 | 405 | PREDICTED: arrestin homolog isoform 1 [M | 0.845 | 0.945 | 0.655 | 1e-162 | |
| 380027220 | 405 | PREDICTED: arrestin homolog [Apis florea | 0.845 | 0.945 | 0.653 | 1e-161 | |
| 66517414 | 405 | PREDICTED: arrestin homolog isoform 2 [A | 0.845 | 0.945 | 0.653 | 1e-161 | |
| 340720118 | 391 | PREDICTED: arrestin homolog isoform 2 [B | 0.814 | 0.943 | 0.626 | 1e-154 | |
| 350408258 | 391 | PREDICTED: arrestin homolog isoform 2 [B | 0.814 | 0.943 | 0.626 | 1e-153 | |
| 359719330 | 407 | arrestin 2 [Maruca vitrata] | 0.849 | 0.945 | 0.617 | 1e-152 | |
| 383847094 | 390 | PREDICTED: arrestin homolog isoform 2 [M | 0.812 | 0.943 | 0.630 | 1e-151 |
| >gi|416656|sp|P32122.1|ARRH_LOCMI RecName: Full=Arrestin homolog gi|298756|gb|AAB25860.1| arrestin homolog [Locusta migratoria] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/447 (66%), Positives = 346/447 (77%), Gaps = 62/447 (13%)
Query: 6 GKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVMGVKF 65
GKVTVYLGKRDFIDHL+ VDPIDG++VV+N+YL+GRKVFGQ+ TTYRYGREEDEVMG+KF
Sbjct: 23 GKVTVYLGKRDFIDHLDHVDPIDGIVVVDNDYLRGRKVFGQLTTTYRYGREEDEVMGLKF 82
Query: 66 SKEMIVDRGQIVPSTNEKPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQPGDEDT 125
+KEM++ + QIVP T EK ELT IQE+L+KKLGPNA+PFTFHFP+ +PSSVTLQPGD+D
Sbjct: 83 TKEMVLAKEQIVPQTKEKMELTPIQERLMKKLGPNAFPFTFHFPASSPSSVTLQPGDDDQ 142
Query: 126 GKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKKCYVVQHCEVTMVNSQFSRYVASLETR 185
GKPLGVE+++ K +V H E R +L
Sbjct: 143 GKPLGVEYSV-----------------------KTWVGDHAE----EKGHKRSAVTL--- 172
Query: 186 EVLADKDKTNALKKSKSIDRARYENSCYATDDDDNILQYAPPSRGRRLPSSLVSKGFTFS 245
A+KK LQYAPP+RGRRLPSSLVSKGFTFS
Sbjct: 173 ----------AIKK----------------------LQYAPPTRGRRLPSSLVSKGFTFS 200
Query: 246 QGKINLEVTLDREIYYHGEKVAATIVVNNTSRKSVKNIKCYVVQHCEVTMVNSQFSRYVA 305
QGKINLEVTLDREIYYHGEK+AA +++NN SRK+VKNIK YVVQHCEVTMVN+QFSR+VA
Sbjct: 201 QGKINLEVTLDREIYYHGEKLAANVIINNNSRKTVKNIKVYVVQHCEVTMVNAQFSRHVA 260
Query: 306 SLETREGCPVTPGAAFTKTFYLVPLASSNKDRRGIALDGHLKDDDVNLASSTLIGEGKCP 365
SLETREGCP+TPGA+FTK FYLVP A+SNKDR GIALDG+LKDDDVNLASSTL+ EGK
Sbjct: 261 SLETREGCPITPGASFTKVFYLVPCAASNKDRYGIALDGYLKDDDVNLASSTLVSEGKNT 320
Query: 366 SEAMGIVISYSLRVKLSCGTLGGELQTDVPFKLMNPDPLLADKDKTNALKKSKSIDRARY 425
++A+GIVISYSLRVKL+CGTLGGELQTDVPFKL++P P A+++K A+KK KSI+R RY
Sbjct: 321 TDAIGIVISYSLRVKLNCGTLGGELQTDVPFKLLHPAPGTAEREKAQAIKKMKSIERTRY 380
Query: 426 ENSCYATDDDDNIVFEDFARLRLNEPD 452
ENSCYA DDDDNIVFEDFARLRLNEP+
Sbjct: 381 ENSCYAADDDDNIVFEDFARLRLNEPE 407
|
Source: Locusta migratoria Species: Locusta migratoria Genus: Locusta Family: Acrididae Order: Orthoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340720116|ref|XP_003398489.1| PREDICTED: arrestin homolog isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|350408253|ref|XP_003488351.1| PREDICTED: arrestin homolog isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|383847092|ref|XP_003699189.1| PREDICTED: arrestin homolog isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|380027220|ref|XP_003697327.1| PREDICTED: arrestin homolog [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|66517414|ref|XP_623184.1| PREDICTED: arrestin homolog isoform 2 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|340720118|ref|XP_003398490.1| PREDICTED: arrestin homolog isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|350408258|ref|XP_003488352.1| PREDICTED: arrestin homolog isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|359719330|gb|AEV53930.1| arrestin 2 [Maruca vitrata] | Back alignment and taxonomy information |
|---|
| >gi|383847094|ref|XP_003699190.1| PREDICTED: arrestin homolog isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 453 | ||||||
| FB|FBgn0040206 | 470 | krz "kurtz" [Drosophila melano | 0.348 | 0.336 | 0.512 | 1.2e-87 | |
| FB|FBgn0000121 | 401 | Arr2 "Arrestin 2" [Drosophila | 0.501 | 0.566 | 0.710 | 7.7e-87 | |
| ZFIN|ZDB-GENE-060824-1 | 418 | arrb1 "arrestin, beta 1" [Dani | 0.339 | 0.368 | 0.535 | 1.2e-81 | |
| UNIPROTKB|J9NY42 | 405 | ARRB1 "Uncharacterized protein | 0.339 | 0.380 | 0.529 | 3.2e-81 | |
| UNIPROTKB|P32121 | 409 | ARRB2 "Beta-arrestin-2" [Homo | 0.337 | 0.374 | 0.512 | 5.1e-81 | |
| UNIPROTKB|F1MZR6 | 409 | ARRB1 "Beta-arrestin-1" [Bos t | 0.339 | 0.376 | 0.522 | 1.1e-80 | |
| UNIPROTKB|F1RFU0 | 411 | ARRB2 "Uncharacterized protein | 0.337 | 0.372 | 0.512 | 1.1e-80 | |
| RGD|2156 | 418 | Arrb1 "arrestin, beta 1" [Ratt | 0.339 | 0.368 | 0.529 | 2.8e-80 | |
| FB|FBgn0000120 | 364 | Arr1 "Arrestin 1" [Drosophila | 0.397 | 0.494 | 0.469 | 2.8e-80 | |
| MGI|MGI:99474 | 410 | Arrb2 "arrestin, beta 2" [Mus | 0.337 | 0.373 | 0.525 | 2.8e-80 |
| FB|FBgn0040206 krz "kurtz" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 451 (163.8 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 81/158 (51%), Positives = 116/158 (73%)
Query: 2 TSFPGKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVM 61
+S GK+TVYLGKRDF+DH+ VDPIDGV+ ++ EY+K RKVFGQ++ +RYGRE+ +V+
Sbjct: 53 SSSNGKITVYLGKRDFVDHVTHVDPIDGVVFIDPEYVKDRKVFGQVLAAFRYGREDLDVL 112
Query: 62 GVKFSKEMIVDRGQIVPSTNEKPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQPG 121
G+ F K++ + QI P +T +QE+L+KKLGPNA+PF F P P+SV+LQP
Sbjct: 113 GLTFRKDLYLAHEQIYPPMQLDRPMTRLQERLIKKLGPNAHPFYFEVPPYCPASVSLQPA 172
Query: 122 DEDTGKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKK 159
D GK GV++ +K FVG+++++K HKR+SV L I+K
Sbjct: 173 PGDVGKSCGVDYELKAFVGENVEDKPHKRNSVRLTIRK 210
|
|
| FB|FBgn0000121 Arr2 "Arrestin 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060824-1 arrb1 "arrestin, beta 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NY42 ARRB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P32121 ARRB2 "Beta-arrestin-2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MZR6 ARRB1 "Beta-arrestin-1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RFU0 ARRB2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| RGD|2156 Arrb1 "arrestin, beta 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0000120 Arr1 "Arrestin 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:99474 Arrb2 "arrestin, beta 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 453 | |||
| pfam00339 | 148 | pfam00339, Arrestin_N, Arrestin (or S-antigen), N- | 2e-27 | |
| smart01017 | 142 | smart01017, Arrestin_C, Arrestin (or S-antigen), C | 7e-24 | |
| pfam02752 | 136 | pfam02752, Arrestin_C, Arrestin (or S-antigen), C- | 3e-16 |
| >gnl|CDD|215866 pfam00339, Arrestin_N, Arrestin (or S-antigen), N-terminal domain | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-27
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 8 VTVYLGKRDFIDHLEEVDPIDGVIVVEN-EYLKGRKVFGQIITTYRYGREEDEVMGVKFS 66
T+YL K D + H E P+ G +++ + +K R V + R G EE EVMG+ F
Sbjct: 1 FTIYLDKPDPVYHPGE--PVSGKVLLTTKKPIKARAVKITLKGRARTGWEESEVMGLTFR 58
Query: 67 KEMIVDRGQIVPSTNEKPELTVIQEKLLKK--------LGPNAYPFTFHFPSGAPSSVTL 118
K K QE+L KK G +A+PF+F P P S
Sbjct: 59 K------QIYPTVNYSKETYLDTQERLWKKKDGSNELPAGTHAFPFSFELPPNCPPSFEG 112
Query: 119 QPGDEDTGKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKK 159
QPG G+ + +K + D +K HKR V I+K
Sbjct: 113 QPG--------GIRYEVKVEL-DRPWKKDHKRKKVFTVIRK 144
|
Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain. Length = 148 |
| >gnl|CDD|214976 smart01017, Arrestin_C, Arrestin (or S-antigen), C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|217215 pfam02752, Arrestin_C, Arrestin (or S-antigen), C-terminal domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| KOG3865|consensus | 402 | 100.0 | ||
| KOG3780|consensus | 427 | 99.88 | ||
| PF02752 | 136 | Arrestin_C: Arrestin (or S-antigen), C-terminal do | 99.71 | |
| PF00339 | 149 | Arrestin_N: Arrestin (or S-antigen), N-terminal do | 99.2 | |
| PF03643 | 275 | Vps26: Vacuolar protein sorting-associated protein | 97.85 | |
| PF13002 | 191 | LDB19: Arrestin_N terminal like; InterPro: IPR0243 | 96.63 | |
| PF08737 | 415 | Rgp1: Rgp1; InterPro: IPR014848 Rgp1 forms heterod | 96.18 | |
| PF00339 | 149 | Arrestin_N: Arrestin (or S-antigen), N-terminal do | 95.53 | |
| PF00927 | 107 | Transglut_C: Transglutaminase family, C-terminal i | 94.02 | |
| PF07070 | 218 | Spo0M: SpoOM protein; InterPro: IPR009776 This fam | 93.0 | |
| PF07070 | 218 | Spo0M: SpoOM protein; InterPro: IPR009776 This fam | 88.57 | |
| KOG3780|consensus | 427 | 87.53 | ||
| smart00809 | 104 | Alpha_adaptinC2 Adaptin C-terminal domain. Adaptin | 81.2 | |
| PF01835 | 99 | A2M_N: MG2 domain; InterPro: IPR002890 The protein | 81.11 | |
| PF03643 | 275 | Vps26: Vacuolar protein sorting-associated protein | 80.84 |
| >KOG3865|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-144 Score=1061.15 Aligned_cols=377 Identities=52% Similarity=0.872 Sum_probs=362.6
Q ss_pred CCCCceEEEEecceeeeecCCCceeeeeEEEEcceeeeceeEEEEEEEEEeccccCccccCcccchheeeeeeEEeeCCC
Q psy16524 2 TSFPGKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVMGVKFSKEMIVDRGQIVPSTN 81 (453)
Q Consensus 2 ~spn~klt~YlgkRd~vd~~~~vd~v~Gvv~vd~~~l~~rkV~~ql~~tfRYGred~eVmgl~F~ke~~~~~~qi~P~~~ 81 (453)
+|||||||+||||||||||++.||||||||+|||||||+||||+||+|+|||||||+|||||+|+||||+++.|+|||.+
T Consensus 11 ~SpNgkiT~YLgkRDFvDhvd~vdPvDGvVlvDpeYlK~RKvfv~L~caFRYGREDldVlGLtFrKdL~~~~~Qv~Pp~~ 90 (402)
T KOG3865|consen 11 ASPNGKITVYLGKRDFVDHVDQVDPVDGVVLVDPEYLKDRKVFVQLTCAFRYGREDLDVLGLTFRKDLYLATVQVYPPPE 90 (402)
T ss_pred cCCCCcEEEEecccccccccccccccceeEEEChHHhccceEEEEEEeeeecccccceeeeeEEEeeeEEEEEEeeCCCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcHHHHHHhhccCCCeeeeEeeCCCCCCceEEecCCCCCCCCcceeEEEEEEEEcCCCcccCcccceeEEeEEEee
Q psy16524 82 EKPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQPGDEDTGKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKKCY 161 (453)
Q Consensus 82 ~~~~lt~lQe~L~kklG~~a~PF~f~lp~~~P~Sv~Lqp~~~~~G~p~gv~Y~Vka~iad~~~ek~~kr~sv~~~Irk~~ 161 (453)
...+||+|||||+||||.|||||+|++|+++||||+|||+|+|+||||||+|+||||+||+.+||+|||++|||+|||
T Consensus 91 ~~~plT~lQErLlkKLG~nAyPF~f~~pp~~P~SVtLQp~p~D~gKpcGVdyevkaF~~~s~edk~hKr~sVrL~IRK-- 168 (402)
T KOG3865|consen 91 DSRPLTRLQERLLKKLGSNAYPFTFEFPPNLPCSVTLQPGPEDTGKPCGVDYEVKAFVADSEEDKIHKRNSVRLVIRK-- 168 (402)
T ss_pred CCCcccHHHHHHHHHhCCCCCceEEeCCCCCCceEEeccCCccCCCcccceEEEEEEecCCcccccccccceeeeeee--
Confidence 788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeeeeeecccchhhhcccchhhhhccccchhhhcccccccccccccccccCCCCCcccccCCCCCCCCCCceeeeee
Q psy16524 162 VVQHCEVTMVNSQFSRYVASLETREVLADKDKTNALKKSKSIDRARYENSCYATDDDDNILQYAPPSRGRRLPSSLVSKG 241 (453)
Q Consensus 162 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~aP~~~~~~~p~~e~~K~ 241 (453)
+||||...|+| |+++++|.
T Consensus 169 ------------------------------------------------------------vqyAP~~~Gpq-P~~~v~k~ 187 (402)
T KOG3865|consen 169 ------------------------------------------------------------VQYAPLEPGPQ-PSAEVSKQ 187 (402)
T ss_pred ------------------------------------------------------------eeecCCCCCCC-chhHhhHh
Confidence 99999999999 99999999
Q ss_pred eeeecCceEEEEEeccccccCCCeEEEEEEEeCCCCceeEeEEEEEEEEEEEEEE-cceEEEEEEeeeeccCCcCCCCCe
Q psy16524 242 FTFSQGKINLEVTLDREIYYHGEKVAATIVVNNTSRKSVKNIKCYVVQHCEVTMV-NSQFSRYVASLETREGCPVTPGAA 320 (453)
Q Consensus 242 F~~ssGpl~LeasLdK~~Y~pGE~I~V~v~I~N~Ssk~VkkIKv~l~Q~~~v~lf-~g~yk~~Va~~E~~eG~pV~pgst 320 (453)
|+||+|+|||+|||||++|||||+|.|||+|+|||+|+||+||+.++|++||||| ++||+++||.+|+.|||||+||+|
T Consensus 188 FlmS~~~lhLevsLDkEiYyHGE~isvnV~V~NNsnKtVKkIK~~V~Q~adi~Lfs~aqy~~~VA~~E~~eGc~v~Pgst 267 (402)
T KOG3865|consen 188 FLMSDGPLHLEVSLDKEIYYHGEPISVNVHVTNNSNKTVKKIKISVRQVADICLFSTAQYKKPVAMEETDEGCPVAPGST 267 (402)
T ss_pred hccCCCceEEEEEecchheecCCceeEEEEEecCCcceeeeeEEEeEeeceEEEEecccccceeeeeecccCCccCCCCe
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred EEEEEEEeeccCCCCccceeeecCcccCCCCcCCCceeecCCCCCCCceeeEEEEEEEEEEEEcC-CCcceeEEeeEEee
Q psy16524 321 FTKTFYLVPLASSNKDRRGIALDGHLKDDDVNLASSTLIGEGKCPSEAMGIVISYSLRVKLSCGT-LGGELQTDVPFKLM 399 (453)
Q Consensus 321 ~~k~~~L~Pll~~nr~krglALdG~Lk~edtnLASSTil~~~~~~ke~~gI~VSY~VKVkL~vsg-~gsdv~veLPf~L~ 399 (453)
++|+|+|+|+|++|++||||||||+|||||||||||||+.++. ++|.+||.|||+|||||.+|+ .+|++.+||||+||
T Consensus 268 l~Kvf~l~PllanN~dkrGlALDG~lKhEDtnLASSTii~~~~-~re~lGI~VsY~VkVkL~vs~ll~ge~~~ElPF~Lm 346 (402)
T KOG3865|consen 268 LSKVFTLTPLLANNKDKRGLALDGKLKHEDTNLASSTIIREGA-DREALGILVSYKVKVKLVVSRLLGGEVAAELPFTLM 346 (402)
T ss_pred eeeeEEechhhhcCcccccccccccccccccccchhheecCCC-CcceeEEEEEEEEEEEEEEecccCCceeeecceEEe
Confidence 9999999999999999999999999999999999999999999 999999999999999999994 78999999999999
Q ss_pred CCCCCCcCccc-ccccccCCccccccccccCCCCCCCCCeEeeeccccccCCC
Q psy16524 400 NPDPLLADKDK-TNALKKSKSIDRARYENSCYATDDDDNIVFEDFARLRLNEP 451 (453)
Q Consensus 400 hp~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~f~~~~~~~~ 451 (453)
||+|.+.+... .++....++|+++++ |||||||||||+||++-
T Consensus 347 hPkP~~~p~~~a~~~~~~i~li~~~~~---------dddivfEdFar~rl~~~ 390 (402)
T KOG3865|consen 347 HPKPGEEPRSEAPESETSINLIELDTN---------DDDIVFEDFARMRLKGM 390 (402)
T ss_pred cCCCCCCccchhccccCchhhhhccCC---------CCceehHHHHHhhhccC
Confidence 99998875532 223344677887775 79999999999999754
|
|
| >KOG3780|consensus | Back alignment and domain information |
|---|
| >PF02752 Arrestin_C: Arrestin (or S-antigen), C-terminal domain; InterPro: IPR011022 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli | Back alignment and domain information |
|---|
| >PF00339 Arrestin_N: Arrestin (or S-antigen), N-terminal domain; InterPro: IPR011021 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli | Back alignment and domain information |
|---|
| >PF03643 Vps26: Vacuolar protein sorting-associated protein 26 ; InterPro: IPR005377 The movement of lipid and protein components between intracellular organelles requires the regulated interactions of many molecules | Back alignment and domain information |
|---|
| >PF13002 LDB19: Arrestin_N terminal like; InterPro: IPR024391 This entry represents a predicted Ig-like beta sandwich domain found towards the N terminus of protein LDB19 [] | Back alignment and domain information |
|---|
| >PF08737 Rgp1: Rgp1; InterPro: IPR014848 Rgp1 forms heterodimer with Ric1 (IPR009771 from INTERPRO) which associates with Golgi membranes and functions as a guanyl-nucleotide exchange factor [] | Back alignment and domain information |
|---|
| >PF00339 Arrestin_N: Arrestin (or S-antigen), N-terminal domain; InterPro: IPR011021 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli | Back alignment and domain information |
|---|
| >PF00927 Transglut_C: Transglutaminase family, C-terminal ig like domain; InterPro: IPR008958 Synonym(s): Protein-glutamine gamma-glutamyltransferase, Fibrinoligase, TGase Transglutaminases catalyse the post-translational modification of proteins at glutamine residues, with formation of isopeptide bonds | Back alignment and domain information |
|---|
| >PF07070 Spo0M: SpoOM protein; InterPro: IPR009776 This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis | Back alignment and domain information |
|---|
| >PF07070 Spo0M: SpoOM protein; InterPro: IPR009776 This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis | Back alignment and domain information |
|---|
| >KOG3780|consensus | Back alignment and domain information |
|---|
| >smart00809 Alpha_adaptinC2 Adaptin C-terminal domain | Back alignment and domain information |
|---|
| >PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white | Back alignment and domain information |
|---|
| >PF03643 Vps26: Vacuolar protein sorting-associated protein 26 ; InterPro: IPR005377 The movement of lipid and protein components between intracellular organelles requires the regulated interactions of many molecules | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 453 | ||||
| 1g4m_A | 393 | Crystal Structure Of Bovine Beta-Arrestin 1 Length | 3e-43 | ||
| 1g4m_A | 393 | Crystal Structure Of Bovine Beta-Arrestin 1 Length | 1e-34 | ||
| 3gc3_A | 385 | Crystal Structure Of Arrestin2s And Clathrin Length | 4e-43 | ||
| 3gc3_A | 385 | Crystal Structure Of Arrestin2s And Clathrin Length | 1e-35 | ||
| 1jsy_A | 418 | Crystal Structure Of Bovine Arrestin-2 Length = 418 | 5e-43 | ||
| 1jsy_A | 418 | Crystal Structure Of Bovine Arrestin-2 Length = 418 | 1e-35 | ||
| 2wtr_B | 418 | Full Length Arrestin2 Length = 418 | 8e-43 | ||
| 2wtr_B | 418 | Full Length Arrestin2 Length = 418 | 1e-35 | ||
| 1suj_A | 392 | X-Ray Crystal Structure Of Ambystoma Tigrinum Cone | 1e-40 | ||
| 1suj_A | 392 | X-Ray Crystal Structure Of Ambystoma Tigrinum Cone | 4e-25 | ||
| 3p2d_A | 393 | Crystal Structure Of Arrestin-3 Reveals The Basis O | 7e-40 | ||
| 3p2d_A | 393 | Crystal Structure Of Arrestin-3 Reveals The Basis O | 5e-37 | ||
| 3ugx_A | 414 | Crystal Structure Of Visual Arrestin Length = 414 | 6e-38 | ||
| 1cf1_A | 404 | Arrestin From Bovine Rod Outer Segments Length = 40 | 6e-38 | ||
| 3ugu_A | 380 | Crystal Structure Of P44 (Splice Variant Of Visual | 5e-36 | ||
| 1ayr_A | 368 | Arrestin From Bovine Rod Outer Segments Length = 36 | 1e-35 |
| >pdb|1G4M|A Chain A, Crystal Structure Of Bovine Beta-Arrestin 1 Length = 393 | Back alignment and structure |
|
| >pdb|1G4M|A Chain A, Crystal Structure Of Bovine Beta-Arrestin 1 Length = 393 | Back alignment and structure |
| >pdb|3GC3|A Chain A, Crystal Structure Of Arrestin2s And Clathrin Length = 385 | Back alignment and structure |
| >pdb|3GC3|A Chain A, Crystal Structure Of Arrestin2s And Clathrin Length = 385 | Back alignment and structure |
| >pdb|1JSY|A Chain A, Crystal Structure Of Bovine Arrestin-2 Length = 418 | Back alignment and structure |
| >pdb|1JSY|A Chain A, Crystal Structure Of Bovine Arrestin-2 Length = 418 | Back alignment and structure |
| >pdb|2WTR|B Chain B, Full Length Arrestin2 Length = 418 | Back alignment and structure |
| >pdb|2WTR|B Chain B, Full Length Arrestin2 Length = 418 | Back alignment and structure |
| >pdb|1SUJ|A Chain A, X-Ray Crystal Structure Of Ambystoma Tigrinum Cone Arrestin Length = 392 | Back alignment and structure |
| >pdb|1SUJ|A Chain A, X-Ray Crystal Structure Of Ambystoma Tigrinum Cone Arrestin Length = 392 | Back alignment and structure |
| >pdb|3P2D|A Chain A, Crystal Structure Of Arrestin-3 Reveals The Basis Of The Difference In Receptor Binding Between Two Non-Visual Subtypes Length = 393 | Back alignment and structure |
| >pdb|3P2D|A Chain A, Crystal Structure Of Arrestin-3 Reveals The Basis Of The Difference In Receptor Binding Between Two Non-Visual Subtypes Length = 393 | Back alignment and structure |
| >pdb|3UGX|A Chain A, Crystal Structure Of Visual Arrestin Length = 414 | Back alignment and structure |
| >pdb|1CF1|A Chain A, Arrestin From Bovine Rod Outer Segments Length = 404 | Back alignment and structure |
| >pdb|3UGU|A Chain A, Crystal Structure Of P44 (Splice Variant Of Visual Arrestin) Length = 380 | Back alignment and structure |
| >pdb|1AYR|A Chain A, Arrestin From Bovine Rod Outer Segments Length = 368 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 453 | |||
| 3ugu_A | 380 | S-arrestin; arrestin fold, signal termination, GPC | 1e-110 | |
| 1g4m_A | 393 | Beta-arrestin1; sensory transduction, alternative | 1e-107 | |
| 1suj_A | 392 | CONE arrestin; sensory transduction, signaling pro | 1e-101 |
| >3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A Length = 380 | Back alignment and structure |
|---|
Score = 330 bits (847), Expect = e-110
Identities = 145/418 (34%), Positives = 214/418 (51%), Gaps = 69/418 (16%)
Query: 2 TSFPGKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVM 61
S VT+YLGKRD+IDH+E V+P+DGV++V+ E +KG++V+ + +RYG+E+ +VM
Sbjct: 26 ISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVM 85
Query: 62 GVKFSKEMIVDRGQIVPSTNEKPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQPG 121
G+ F +++ + Q+ P T +QE L+KKLG N YPF FP P SV LQP
Sbjct: 86 GLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPA 145
Query: 122 DEDTGKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKKCYVVQHCEVTMVNSQFSRYVAS 181
+D G K C V +
Sbjct: 146 PQDVG-------------------------------KSCGV--------------DFEIK 160
Query: 182 LETREVLADKDKTNALKKSKSIDRARYENSCYATDDDDNILQYAPPSRGRRLPSSLVSKG 241
++ D+ ++S +Q+AP G + P + S
Sbjct: 161 AFATHSTDVEE-----------DKIPKKSSVRLLIRK---VQHAPRDMGPQ-PRAEASWQ 205
Query: 242 FTFSQGKINLEVTLDREIYYHGEKVAATIVVNNTSRKSVKNIKCYVVQHCEVTMVNS-QF 300
F S + L V+L +EIYYHGE + T+ V N++ K+VK IK V Q V + +S +
Sbjct: 206 FFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYY 265
Query: 301 SRYVASLETREGCPVTPGAAFTKTFYLVPLASSNKDRRGIALDGHLKDDDVNLASSTLIG 360
+ VA+ E +E P P ++ TKT LVPL ++N++RRGIALDG +K +D NLASST+I
Sbjct: 266 IKTVAAEEAQEKVP--PNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIK 323
Query: 361 EGKCPSEAMGIVISYSLRVKLSCGTLGG-----ELQTDVPFKLMNPDPLLADKDKTNA 413
EG MGI++SY ++VKL+ L G E+ T+VPF+LM+P P D K +A
Sbjct: 324 EGID-KTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDTAKESA 380
|
| >1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A Length = 393 | Back alignment and structure |
|---|
| >1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum} Length = 392 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| 3ugu_A | 380 | S-arrestin; arrestin fold, signal termination, GPC | 100.0 | |
| 1suj_A | 392 | CONE arrestin; sensory transduction, signaling pro | 100.0 | |
| 1g4m_A | 393 | Beta-arrestin1; sensory transduction, alternative | 100.0 | |
| 2r51_A | 340 | Vacuolar protein sorting-associated protein 26B; r | 99.7 | |
| 2fau_A | 341 | Vacuolar protein sorting 26; arrestin, retromer, p | 99.59 | |
| 2r51_A | 340 | Vacuolar protein sorting-associated protein 26B; r | 94.82 | |
| 2fau_A | 341 | Vacuolar protein sorting 26; arrestin, retromer, p | 93.92 | |
| 2p9r_A | 102 | Alpha-2-M, alpha-2-macroglobulin; human alpha2-mac | 83.4 |
| >3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-124 Score=951.28 Aligned_cols=342 Identities=44% Similarity=0.742 Sum_probs=322.9
Q ss_pred CCCCceEEEEecceeeeecCCCceeeeeEEEEcceeeeceeEEEEEEEEEeccccCccccCcccchheeeeeeEEeeCCC
Q psy16524 2 TSFPGKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVMGVKFSKEMIVDRGQIVPSTN 81 (453)
Q Consensus 2 ~spn~klt~YlgkRd~vd~~~~vd~v~Gvv~vd~~~l~~rkV~~ql~~tfRYGred~eVmgl~F~ke~~~~~~qi~P~~~ 81 (453)
+||||||||||||||||||+++||||||||+||||||+|||||+||+|||||||||+|||||+||||||+++.|+||+.+
T Consensus 26 ~s~n~klt~YlgkRdfvdh~~~vdpvdGvv~vd~~~~~~rkvf~~l~~~fRYGred~dV~Gl~F~kdl~~~~~qvyP~~~ 105 (380)
T 3ugu_A 26 ISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVG 105 (380)
T ss_dssp ECTTSSEEEEESCSEEEECSSCBCCEEEEEEECHHHHTTCEEEEEEEEEEEECC------CCCEEEEEEEEEEEEESCCS
T ss_pred eCCCCcEEEEecCceEEeecCcccccceEEEECHHHhCCCEEEEEEEEEEecCCCccccccchhhhhhhheeEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCcHHHHHHhhccCCCeeeeEeeCCCCCCceEEecCCCCCCCCcceeEEEEEEEEcCCC---cccCcccceeEEeEE
Q psy16524 82 EKPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQPGDEDTGKPLGVEHAIKTFVGDSI---DEKGHKRSSVALAIK 158 (453)
Q Consensus 82 ~~~~lt~lQe~L~kklG~~a~PF~f~lp~~~P~Sv~Lqp~~~~~G~p~gv~Y~Vka~iad~~---~ek~~kr~sv~~~Ir 158 (453)
.+.+||+||||||||||.|||||+|+||+++||||+|||||+|+|+||||+|+||||+|++. +||.|||++|+|+||
T Consensus 106 ~~~~lT~lQe~L~kKlG~nayPF~f~LP~~lPsSv~LQp~p~d~Gk~cgV~YeVKafia~~~~~~~dk~~Kr~sV~L~Ir 185 (380)
T 3ugu_A 106 ASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIR 185 (380)
T ss_dssp CCCCCCHHHHHHHHHHCTTEEEEEECCCSSCCCSEEECCCTTCCSCCEEEEEEEEEEEEBCCSSSSSBCCGGGEEEEEEE
T ss_pred CCCCCCHHHHHHHHHhCcCceeEEEeCCCCCCCEEEeccCCccCCCccceEEEEEEEEccCcccccccccccceEEEeee
Confidence 88999999999999999999999999999999999999999999999999999999999987 899999999999999
Q ss_pred EeeEEeeeeeeeecccchhhhcccchhhhhccccchhhhcccccccccccccccccCCCCCcccccCCCCCCCCCCceee
Q psy16524 159 KCYVVQHCEVTMVNSQFSRYVASLETREVLADKDKTNALKKSKSIDRARYENSCYATDDDDNILQYAPPSRGRRLPSSLV 238 (453)
Q Consensus 159 k~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~aP~~~~~~~p~~e~ 238 (453)
+ +||||...+++ |++|+
T Consensus 186 k--------------------------------------------------------------lq~aP~~~~~~-P~~e~ 202 (380)
T 3ugu_A 186 K--------------------------------------------------------------VQHAPRDMGPQ-PRAEA 202 (380)
T ss_dssp E--------------------------------------------------------------EEBCCSCCCCC-CEEEE
T ss_pred e--------------------------------------------------------------cccCCcccCCC-CcceE
Confidence 9 99999988887 99999
Q ss_pred eeeeeeecCceEEEEEeccccccCCCeEEEEEEEeCCCCceeEeEEEEEEEEEEEEEE-cceEEEEEEeeeeccCCcCCC
Q psy16524 239 SKGFTFSQGKINLEVTLDREIYYHGEKVAATIVVNNTSRKSVKNIKCYVVQHCEVTMV-NSQFSRYVASLETREGCPVTP 317 (453)
Q Consensus 239 ~K~F~~ssGpl~LeasLdK~~Y~pGE~I~V~v~I~N~Ssk~VkkIKv~l~Q~~~v~lf-~g~yk~~Va~~E~~eG~pV~p 317 (453)
+|+|||++|+|+|+|+|||++|+|||+|+|+++|+|+|+++|++||++|+|+++++|| +|+|+++||.+|+.+ ||+|
T Consensus 203 ~K~F~~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~Va~~E~~e--pV~p 280 (380)
T 3ugu_A 203 SWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQE--KVPP 280 (380)
T ss_dssp EEECTTCCCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEEEEEEECSC--CBCT
T ss_pred EEEeEecCCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEEEEEeccCC--cCCC
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999876 9999
Q ss_pred CCeEEEEEEEeeccCCCCccceeeecCcccCCCCcCCCceeecCCCCCCCceeeEEEEEEEEEEEEcCCC-----cceeE
Q psy16524 318 GAAFTKTFYLVPLASSNKDRRGIALDGHLKDDDVNLASSTLIGEGKCPSEAMGIVISYSLRVKLSCGTLG-----GELQT 392 (453)
Q Consensus 318 gst~~k~~~L~Pll~~nr~krglALdG~Lk~edtnLASSTil~~~~~~ke~~gI~VSY~VKVkL~vsg~g-----sdv~v 392 (453)
|++|+++|+|+|++++||+||||||||+|||||||||||||+.++. +||++||.|||+|||+|++|++| |||.+
T Consensus 281 gst~~k~~~l~P~l~~n~~krglALdG~lk~edtnLASsT~~~~~~-~ke~~GI~VsY~VkVkl~v~~lgg~~~~sdv~~ 359 (380)
T 3ugu_A 281 NSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGI-DKTVMGILVSYQIKVKLTVSGLLGELTSSEVAT 359 (380)
T ss_dssp TEEEEEEEEECCCGGGCSCCTTSCBSSCTTCTTCCBCCCCCCCTTC-CGGGGSEEEEEEEEEEEEECCCTTCSSCEEEEE
T ss_pred CCeEEeeEEEEEecccCCceeeEEecceeccCCCcccceeEecCCC-CCcceEEEEEEEEEEEEEEecccCCccccceEE
Confidence 9999999999999999999999999999999999999999999998 99999999999999999999644 59999
Q ss_pred EeeEEeeCCCCCCcCcc
Q psy16524 393 DVPFKLMNPDPLLADKD 409 (453)
Q Consensus 393 eLPf~L~hp~P~~~~~~ 409 (453)
||||+||||+|+++...
T Consensus 360 elPf~Lmhp~P~~~~~~ 376 (380)
T 3ugu_A 360 EVPFRLMHPQPEDPDTA 376 (380)
T ss_dssp EEEEEEEBCCC------
T ss_pred EecccccCCCCCCcccc
Confidence 99999999999876543
|
| >1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum} | Back alignment and structure |
|---|
| >1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A | Back alignment and structure |
|---|
| >2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A | Back alignment and structure |
|---|
| >2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A | Back alignment and structure |
|---|
| >2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 453 | ||||
| d1g4ma1 | 171 | b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), be | 1e-80 | |
| d1cf1a1 | 173 | b.1.18.11 (A:10-182) Arrestin {Cow (Bos taurus), v | 8e-80 | |
| d1cf1a2 | 211 | b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), | 3e-61 | |
| d1g4ma2 | 218 | b.1.18.11 (A:176-393) Arrestin {Cow (Bos taurus), | 2e-57 |
| >d1g4ma1 b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: Arrestin/Vps26-like domain: Arrestin species: Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]
Score = 244 bits (626), Expect = 1e-80
Identities = 83/159 (52%), Positives = 115/159 (72%), Gaps = 1/159 (0%)
Query: 2 TSFPGKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVM 61
S GK+TVYLGKRDF+DH++ V+P+DGV++V+ EYLK R+V+ + +RYGRE+ +V+
Sbjct: 8 ASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTCAFRYGREDLDVL 67
Query: 62 GVKFSKEMIVDRGQIVPSTNE-KPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQP 120
G+ F K++ V Q P E K LT +QE+L+KKLG +AYPFTF P P SVTLQP
Sbjct: 68 GLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQP 127
Query: 121 GDEDTGKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKK 159
G EDTGK GV++ +K F ++++EK HKR+SV L I+K
Sbjct: 128 GPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRK 166
|
| >d1cf1a1 b.1.18.11 (A:10-182) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} Length = 173 | Back information, alignment and structure |
|---|
| >d1cf1a2 b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} Length = 211 | Back information, alignment and structure |
|---|
| >d1g4ma2 b.1.18.11 (A:176-393) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} Length = 218 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| d1g4ma1 | 171 | Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId | 100.0 | |
| d1cf1a1 | 173 | Arrestin {Cow (Bos taurus), visual arrestin [TaxId | 100.0 | |
| d1cf1a2 | 211 | Arrestin {Cow (Bos taurus), visual arrestin [TaxId | 100.0 | |
| d1g4ma2 | 218 | Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId | 100.0 | |
| d1ex0a2 | 112 | Transglutaminase, two C-terminal domains {Human (H | 90.84 | |
| d1g0da2 | 112 | Transglutaminase, two C-terminal domains {Red sea | 90.57 | |
| d1vjja2 | 115 | Transglutaminase, two C-terminal domains {Human (H | 88.1 | |
| d2q3za2 | 114 | Transglutaminase, two C-terminal domains {Human (H | 85.53 |
| >d1g4ma1 b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: Arrestin/Vps26-like domain: Arrestin species: Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]
Probab=100.00 E-value=1.5e-79 Score=558.45 Aligned_cols=158 Identities=52% Similarity=0.911 Sum_probs=155.2
Q ss_pred CCCCceEEEEecceeeeecCCCceeeeeEEEEcceeeeceeEEEEEEEEEeccccCccccCcccchheeeeeeEEeeCCC
Q psy16524 2 TSFPGKVTVYLGKRDFIDHLEEVDPIDGVIVVENEYLKGRKVFGQIITTYRYGREEDEVMGVKFSKEMIVDRGQIVPSTN 81 (453)
Q Consensus 2 ~spn~klt~YlgkRd~vd~~~~vd~v~Gvv~vd~~~l~~rkV~~ql~~tfRYGred~eVmgl~F~ke~~~~~~qi~P~~~ 81 (453)
+|||||||+||||||||||+++||||||||+||||||||||||+||+|||||||||+|||||+||||+|+++.||||+.+
T Consensus 8 sSpNgklTvYLgKRDfvDh~~~vdpvDGVVlvDpeylk~rKVf~~l~c~FRYGRed~dVmGL~Frkdl~l~~~QvyPp~~ 87 (171)
T d1g4ma1 8 ASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTCAFRYGREDLDVLGLTFRKDLFVANVQSFPPAP 87 (171)
T ss_dssp ECTTSSCEEEESCSEEEECSSCBCCEEEEEECCHHHHTTCEEEEEEEEEEEESCTTCCCTTTCEEEEEEEEEEEEESCST
T ss_pred cCCCCcEEEEeccceEEecCCcccccceEEEECHHHhCcceeEEEEEEEEeecccchhccccceeeeeeecceeecCCCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred -CCCCCcHHHHHHhhccCCCeeeeEeeCCCCCCceEEecCCCCCCCCcceeEEEEEEEEcCCCcccCcccceeEEeEEE
Q psy16524 82 -EKPELTVIQEKLLKKLGPNAYPFTFHFPSGAPSSVTLQPGDEDTGKPLGVEHAIKTFVGDSIDEKGHKRSSVALAIKK 159 (453)
Q Consensus 82 -~~~~lt~lQe~L~kklG~~a~PF~f~lp~~~P~Sv~Lqp~~~~~G~p~gv~Y~Vka~iad~~~ek~~kr~sv~~~Irk 159 (453)
.+.+||+||||||||||.|||||+|++|+++||||+||||++|.|+||||+|+||||+||++|||+||||||+|+|||
T Consensus 88 ~~~~~lT~lQerLlkKLG~nA~PF~f~~p~~~P~SVtLQP~~~d~gkpcGVdyevk~f~ae~~dek~hkR~sVrL~IRK 166 (171)
T d1g4ma1 88 EDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRK 166 (171)
T ss_dssp TSCCCCCHHHHHHHHHSCTTEEEEEECCCTTSCCCEEEECCGGGGGGCEEEEEEEEEEEESSTTSCCCGGGEEEEEEEE
T ss_pred cCCCCCcHHHHHHHHhhccCceeeeecCCCCCCCeEEeccCCccCCCcceeEEEEEEEEcCCccccccccceEEEEEEE
Confidence 466799999999999999999999999999999999999999999999999999999999999999999999999999
|
| >d1cf1a1 b.1.18.11 (A:10-182) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1cf1a2 b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1g4ma2 b.1.18.11 (A:176-393) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]} | Back information, alignment and structure |
|---|
| >d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|