Psyllid ID: psy16707

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Protein Sequence
MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccHHHHHHHHHcccEEEEccccEEEcccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccccccEEEcccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccHHHccccEEEEEcccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHcccccEEEEEccccccccHHHHHccccEEEEccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccHHHHHHHHHcccEEEEccccEEEcccccccHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccEEEccccHHHHHHHHHHHcEEcccccEEEHHHccccHHHHHHHHHHcHHHHHHHHHHHHHccccccccHHHHHHHccccccccEEccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccHHHHcccEEEEEEcHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccEEEccccHHHHHHHHHHHcEEcccccEEEHHHcccccHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MLFHNAKKILIRAfyssppihgARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNlqkegsnkpwnhitdqIGMFCYTGLNATQVEKLIKEHSVYltkdgrismagvtsKNVGYLAKAIhangslpirfqdartssvkvpssnllteafkkdtnvnkinlgvgayrddqgkpyvlpsvkqaDEIVLNknldkeyapiigapdfGKLAAQLaygedcpqlKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLknffpgekviyvptptwgnhipickhtgLEKILIRAfyssppihgARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNlqkegsnkpwnhitdqIGMFCYTGLNATQVEKLIKEHSVYltkdgrismagvtsKNVGYLAKAIHAVTK
Flexible Loop (DISEMBL)
MLFHNAKKILIRafyssppiHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDArtssvkvpssnllteafkkdtnvnkinlgvgayrddqgkpyVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLtkdgrismagvtsknVGYLAKAIHAVTK
Low Complexity Region (SEG)
MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK
Disordered region (IsUnstruct)
***HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIIS****************PWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQD************LLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISM***************PWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA***
Disordered Region (DISOPRED)
MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK
Disordered Region (DISEMBL)
MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK
Disordered Region (DISPRO)
MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	420	2.2.26 [Sep-21-2011]
P00507	430	Aspartate aminotransferas	yes	N/A	0.242	0.237	0.713	1e-44
P05202	430	Aspartate aminotransferas	yes	N/A	0.242	0.237	0.713	1e-44
Q5REB0	430	Aspartate aminotransferas	yes	N/A	0.242	0.237	0.704	2e-44
P08907	401	Aspartate aminotransferas	yes	N/A	0.242	0.254	0.696	5e-44
P00508	423	Aspartate aminotransferas	yes	N/A	0.242	0.241	0.688	7e-44
P12344	430	Aspartate aminotransferas	yes	N/A	0.238	0.232	0.704	9e-44
P00506	430	Aspartate aminotransferas	yes	N/A	0.242	0.237	0.688	1e-43
Q4R559	430	Aspartate aminotransferas	N/A	N/A	0.242	0.237	0.696	1e-43
P00505	430	Aspartate aminotransferas	yes	N/A	0.242	0.237	0.696	2e-43
Q28F67	427	Aspartate aminotransferas	yes	N/A	0.242	0.238	0.680	1e-42

>sp|P00507|AATM_RAT Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus GN=Got2 PE=1 SV=2

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 97/122 (79%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 309 KILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE SVY+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 369 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp|P05202|AATM_MOUSE Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 97/122 (79%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 309 KILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE SVY+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 369 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q5REB0|AATM_PONAB Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1

 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 96/122 (78%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRII MR  L  NL+KEGS 
Sbjct: 309 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGST 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+LIKE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 369 HNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P08907|AATM_HORSE Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2 PE=1 SV=1

 Score =  179 bits (453), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 96/122 (78%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPLYSNPPLNGARIASTILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 339

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HI DQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 340 HSWQHIADQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 399

Query: 419 TK 420
           TK
Sbjct: 400 TK 401

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Equus caballus (taxid: 9796)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P00508|AATM_CHICK Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2

 Score =  178 bits (451), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 97/122 (79%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P+L+ +WL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 302 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 361

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGV S NVGYLA AIH V
Sbjct: 362 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 421

Query: 419 TK 420
           TK
Sbjct: 422 TK 423

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. May facilitate cellular uptake of long-chain free fatty acids.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P12344|AATM_BOVIN Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2

 Score =  178 bits (451), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 95/122 (77%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PPI+GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 309 KILIRPMYSNPPINGARIASTILTSPDLRKQWLHEVKGMADRIISMRTQLVSNLKKEGSS 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HI DQIGMFCYTGL   QVE+L KE S+Y+TKDGRIS+AGVTS NV YLA AIH V
Sbjct: 369 HNWQHIIDQIGMFCYTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVAYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P00506|AATM_PIG Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2

 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 96/122 (78%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 309 KILIRPMYSNPPVNGARIASTILTSPDLRQQWLQEVKGMADRIISMRTQLVSNLKKEGSS 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HI DQIGMFC+TG+   QVE+L KE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 369 HNWQHIVDQIGMFCFTGIKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q4R559|AATM_MACFA Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1

 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 95/122 (77%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRII MR  L  NL+KEGS 
Sbjct: 309 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGST 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 369 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P00505|AATM_HUMAN Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=3

 Score =  177 bits (448), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 95/122 (77%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVK MADRII MR  L  NL+KEGS 
Sbjct: 309 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVSNLKKEGST 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+LIKE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 369 HNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q28F67|AATM_XENTR Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis GN=got2 PE=2 SV=1

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 97/122 (79%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ +WL EVKGMA+RIISMR+ L  NL+KEGS 
Sbjct: 306 KILIRPMYSNPPLNGARIAAAILTQPDLRKEWLQEVKGMANRIISMREQLVSNLKKEGSI 365

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HI+DQIGMFC+TGL   QVE+LIKE S+Y+TKDGRIS+AGVTS N GYLA AIH V
Sbjct: 366 HNWQHISDQIGMFCFTGLRPEQVERLIKEFSIYMTKDGRISVAGVTSANNGYLAHAIHQV 425

Query: 419 TK 420
           TK
Sbjct: 426 TK 427

Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. May facilitate cellular uptake of long-chain free fatty acids.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	420
91084123	423	PREDICTED: similar to aspartate aminotra	0.242	0.241	0.770	3e-48
332372484	424	unknown [Dendroctonus ponderosae]	0.242	0.240	0.729	1e-46
332025582	430	Aspartate aminotransferase, mitochondria	0.242	0.237	0.729	5e-46
322800334	430	hypothetical protein SINV_02306 [Solenop	0.242	0.237	0.729	5e-46
201023323	424	aspartate aminotransferase 2 [Acyrthosip	0.226	0.224	0.743	9e-46
383861654	432	PREDICTED: aspartate aminotransferase, m	0.242	0.236	0.713	1e-45
156401599	405	predicted protein [Nematostella vectensi	0.235	0.244	0.729	1e-45
118790651	430	AGAP009685-PA [Anopheles gambiae str. PE	0.228	0.223	0.729	2e-45
443728302	430	hypothetical protein CAPTEDRAFT_158431 [	0.242	0.237	0.729	3e-45
198431669	391	PREDICTED: similar to glutamate oxaloace	0.238	0.255	0.729	1e-44

>gi|91084123|ref|XP_967224.1| PREDICTED: similar to aspartate aminotransferase [Tribolium castaneum] gi|270006661|gb|EFA03109.1| hypothetical protein TcasGA2_TC013019 [Tribolium castaneum]

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/122 (77%), Positives = 104/122 (85%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIRA YS+PPI+GARIV EIL DP L+A WL EVKGMADRIIS+R  L+DNL+KEGS 
Sbjct: 302 KILIRALYSNPPINGARIVAEILTDPALRADWLKEVKGMADRIISVRTKLRDNLKKEGST 361

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           K W HITDQIGMFCYTG+   QVEK+ KEHSV+LTKDGRISMAGVTSKNV YLA A+H V
Sbjct: 362 KNWQHITDQIGMFCYTGMTPDQVEKITKEHSVFLTKDGRISMAGVTSKNVEYLAHAMHTV 421

Query: 419 TK 420
           TK
Sbjct: 422 TK 423

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332372484|gb|AEE61384.1| unknown [Dendroctonus ponderosae]

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 105/122 (86%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIRA YS+PPI+GARIV EIL DP+L++ WL EVKGMADRIIS+R +L+DNL+KEGS 
Sbjct: 303 KILIRALYSNPPINGARIVTEILSDPQLRSDWLKEVKGMADRIISVRTTLRDNLKKEGST 362

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W HIT+QIGMFC+TG+N  QVEKL K+ S+YLTKDGRISMAGVTSKNV YLA A+H  
Sbjct: 363 RNWEHITNQIGMFCFTGMNPQQVEKLTKDFSIYLTKDGRISMAGVTSKNVDYLAHAVHEA 422

Query: 419 TK 420
           TK
Sbjct: 423 TK 424

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025582|gb|EGI65745.1| Aspartate aminotransferase, mitochondrial [Acromyrmex echinatior]

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 103/122 (84%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PPI+GARI  EILGDP+L+ QWL +VKGMADRIIS+R  L+DNL+K GS 
Sbjct: 309 KILIRPMYSNPPIYGARIANEILGDPELRKQWLYDVKGMADRIISVRAKLRDNLKKNGST 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W+HITDQIGMFCYTGL   +VEKL K+ S+YLTKDGRISMAGVTSKNV YLA A+H V
Sbjct: 369 RDWSHITDQIGMFCYTGLKPNEVEKLTKDFSIYLTKDGRISMAGVTSKNVEYLAHAMHEV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322800334|gb|EFZ21338.1| hypothetical protein SINV_02306 [Solenopsis invicta]

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 104/122 (85%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PPI+GARIV EILGDP+L+ +WL +VKGMADRIIS+R  L+DNL+K GS 
Sbjct: 309 KILIRPMYSNPPIYGARIVNEILGDPELRKEWLGDVKGMADRIISVRTKLRDNLKKNGST 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W+HITDQIGMFCYTGL   +VEKL K+ S+YLTKDGRISMAGVTSKNV YLA A+H V
Sbjct: 369 RNWSHITDQIGMFCYTGLKPNEVEKLTKDFSIYLTKDGRISMAGVTSKNVEYLAHAMHEV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|201023323|ref|NP_001128403.1| aspartate aminotransferase 2 [Acyrthosiphon pisum]

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 90/121 (74%), Positives = 101/121 (83%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KI++R  YS+PPIHGARIV EIL +P+L  QWL EVKGMADRIIS+R  LK+ L KEGS 
Sbjct: 302 KIIVRGMYSNPPIHGARIVSEILSNPQLMDQWLVEVKGMADRIISVRYQLKELLDKEGST 361

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           K W HITDQIGMFCYTGL+  QV+KLI +HSVYLT DGRISMAGVTSKNVGYLA A+H V
Sbjct: 362 KNWEHITDQIGMFCYTGLSKDQVKKLIDQHSVYLTNDGRISMAGVTSKNVGYLASAMHKV 421

Query: 419 T 419
           T
Sbjct: 422 T 422

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861654|ref|XP_003706300.1| PREDICTED: aspartate aminotransferase, mitochondrial-like [Megachile rotundata]

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 109/122 (89%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PPIHGARIV EILG+ ++K +WL +VKGMADRIIS+R+ L++NL+K GS+
Sbjct: 311 KILIRPIYSNPPIHGARIVNEILGNSEMKQEWLCDVKGMADRIISVRKQLQENLKKNGSS 370

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W+HITDQIGMFC+TGLN +QVEKL K++S+YLTK+GRISMAGVTSKNV YLA+A+H V
Sbjct: 371 RDWSHITDQIGMFCFTGLNPSQVEKLTKDYSIYLTKNGRISMAGVTSKNVEYLAQAMHEV 430

Query: 419 TK 420
           TK
Sbjct: 431 TK 432

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156401599|ref|XP_001639378.1| predicted protein [Nematostella vectensis] gi|156226506|gb|EDO47315.1| predicted protein [Nematostella vectensis]

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 103/122 (84%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YSSPPIHGARI   +L DP L+AQW TEVKGMADRIISMRQ L+DNL+K+GS+
Sbjct: 284 KILIRPMYSSPPIHGARIAGLVLSDPALRAQWETEVKGMADRIISMRQQLRDNLKKQGSS 343

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W+HITDQIGMFC+TG+   QVE+LIKE S+YLTKDGRIS+AGVTS +V YLA A+H V
Sbjct: 344 HDWSHITDQIGMFCFTGMKPDQVERLIKEFSIYLTKDGRISVAGVTSGSVEYLASAMHEV 403

Query: 419 TK 420
           TK
Sbjct: 404 TK 405

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|118790651|ref|XP_318743.3| AGAP009685-PA [Anopheles gambiae str. PEST] gi|116118048|gb|EAA14551.4| AGAP009685-PA [Anopheles gambiae str. PEST]

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 106/122 (86%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PPIHGAR+V EILGD  L+ +WL +VK MADRIIS+R SL++NL++ GS+
Sbjct: 309 KILIRPMYSNPPIHGARLVAEILGDKSLRQEWLGDVKLMADRIISVRSSLRNNLKELGSS 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W+HITDQIGMFC+TG+N  Q E+L KE SVYLTKDGRISMAGVTSKNVGYLA+AIHAV
Sbjct: 369 RNWSHITDQIGMFCFTGMNQQQCERLSKEFSVYLTKDGRISMAGVTSKNVGYLAEAIHAV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443728302|gb|ELU14716.1| hypothetical protein CAPTEDRAFT_158431 [Capitella teleta]

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 103/122 (84%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP+HGAR+V+ +LG   LK QWL +VK MADRII+MRQSLKD L KEGS+
Sbjct: 309 KILIRPMYSNPPVHGARLVKTVLGSAALKQQWLGDVKLMADRIITMRQSLKDGLAKEGSS 368

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W HITDQIGMFCYTGL   QVE++IKE SVYLTKDGRIS+AGVTSKNVG+LA A+H V
Sbjct: 369 RNWEHITDQIGMFCYTGLKPDQVERMIKEFSVYLTKDGRISVAGVTSKNVGHLAHAMHEV 428

Query: 419 TK 420
           TK
Sbjct: 429 TK 430

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|198431669|ref|XP_002126128.1| PREDICTED: similar to glutamate oxaloacetate transaminase 2 isoform 2 [Ciona intestinalis]

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 98/122 (80%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP +GARI   +L  P+L+ QWL EVKGMADRIISMRQ L DNL+KEGS 
Sbjct: 270 KILIRPMYSNPPCNGARIASTVLTTPELREQWLVEVKGMADRIISMRQQLVDNLKKEGST 329

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + W+HITDQIGMFCYTGLN  QV  L K HSVYLTKDGRIS+AGV S NVGYLA AIH V
Sbjct: 330 RDWSHITDQIGMFCYTGLNPDQVGDLTKNHSVYLTKDGRISVAGVASGNVGYLAHAIHQV 389

Query: 419 TK 420
           TK
Sbjct: 390 TK 391

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	420
ZFIN|ZDB-GENE-030131-7917	428	got2b "glutamic-oxaloacetic tr	0.290	0.285	0.672	9.5e-84
WB|WBGene00015778	414	got-2.2 [Caenorhabditis elegan	0.290	0.294	0.704	2.3e-74
RGD|2722	430	Got2 "glutamic-oxaloacetic tra	0.290	0.283	0.713	2.9e-72
UNIPROTKB|Q5REB0	430	GOT2 "Aspartate aminotransfera	0.290	0.283	0.704	9.7e-72
MGI|MGI:95792	430	Got2 "glutamate oxaloacetate t	0.290	0.283	0.713	2e-71
UNIPROTKB|Q4R559	430	GOT2 "Aspartate aminotransfera	0.290	0.283	0.696	5.3e-71
UNIPROTKB|P12344	430	GOT2 "Aspartate aminotransfera	0.290	0.283	0.704	8.6e-71
UNIPROTKB|P00505	430	GOT2 "Aspartate aminotransfera	0.290	0.283	0.696	8.6e-71
UNIPROTKB|P08907	401	GOT2 "Aspartate aminotransfera	0.290	0.304	0.696	1.1e-70
UNIPROTKB|P00506	430	GOT2 "Aspartate aminotransfera	0.290	0.283	0.688	2.9e-70

ZFIN|ZDB-GENE-030131-7917 got2b "glutamic-oxaloacetic transaminase 2b, mitochondrial (aspartate aminotransferase 2)" [Danio rerio (taxid:7955)]

 Score = 421 (153.3 bits), Expect = 9.5e-84, Sum P(3) = 9.5e-84
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P+L++ WL EVKGMADRII MR+ L  NL+KEGS 
Sbjct:   307 KILIRPIYSNPPMNGARIASTILTTPELRSTWLEEVKGMADRIIRMREMLVTNLKKEGST 366

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W H+TDQIGMFC+TGL   QVE+L K+ SVY+TKDGRIS+AGVTS NV YLA AIH V
Sbjct:   367 HNWQHVTDQIGMFCFTGLKPEQVERLTKDFSVYMTKDGRISVAGVTSGNVEYLAHAIHQV 426

Query:   419 TK 420
             TK
Sbjct:   427 TK 428

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

WB|WBGene00015778 got-2.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 452 (164.2 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
 Identities = 86/122 (70%), Positives = 99/122 (81%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP+HGARI   IL DP L  QWL +VK MADRII+MR +LKD L KEGS 
Sbjct:   293 KILIRPLYSNPPVHGARIASRILADPALNKQWLGDVKLMADRIITMRTTLKDLLAKEGST 352

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             + W HIT+QIGMFC+TG+N  QVEKLIKEHSVYLTKDGRIS+AG++S NV YLA A+H V
Sbjct:   353 RNWEHITNQIGMFCFTGINPQQVEKLIKEHSVYLTKDGRISVAGISSNNVAYLAHALHQV 412

Query:   419 TK 420
             TK
Sbjct:   413 TK 414

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

RGD|2722 Got2 "glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)" [Rattus norvegicus (taxid:10116)]

 Score = 441 (160.3 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
 Identities = 87/122 (71%), Positives = 97/122 (79%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct:   309 KILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HITDQIGMFC+TGL   QVE+L KE SVY+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   369 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISO;ISS;IMP;IDA

GO:0005543 "phospholipid binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO;ISS;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006107 "oxaloacetate metabolic process" evidence=ISO

GO:0006520 "cellular amino acid metabolic process" evidence=IDA;TAS

GO:0006531 "aspartate metabolic process" evidence=ISS;IMP

GO:0006532 "aspartate biosynthetic process" evidence=ISO

GO:0006533 "aspartate catabolic process" evidence=ISO

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009986 "cell surface" evidence=IDA

GO:0015908 "fatty acid transport" evidence=ISO;TAS

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=IDA

GO:0019550 "glutamate catabolic process to aspartate" evidence=ISO

GO:0019551 "glutamate catabolic process to 2-oxoglutarate" evidence=ISO

GO:0019899 "enzyme binding" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IMP;IDA

GO:0031406 "carboxylic acid binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IMP

GO:0043204 "perikaryon" evidence=IDA

GO:0043234 "protein complex" evidence=IDA

GO:0043648 "dicarboxylic acid metabolic process" evidence=IDA

GO:0045471 "response to ethanol" evidence=ISO

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

UNIPROTKB|Q5REB0 GOT2 "Aspartate aminotransferase, mitochondrial" [Pongo abelii (taxid:9601)]

 Score = 443 (161.0 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 86/122 (70%), Positives = 96/122 (78%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRII MR  L  NL+KEGS 
Sbjct:   309 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGST 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HITDQIGMFC+TGL   QVE+LIKE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   369 HNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

MGI|MGI:95792 Got2 "glutamate oxaloacetate transaminase 2, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 441 (160.3 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 87/122 (71%), Positives = 97/122 (79%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct:   309 KILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HITDQIGMFC+TGL   QVE+L KE SVY+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   369 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0003824 "catalytic activity" evidence=IEA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISO;IDA

GO:0005543 "phospholipid binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006107 "oxaloacetate metabolic process" evidence=IDA

GO:0006520 "cellular amino acid metabolic process" evidence=ISO

GO:0006531 "aspartate metabolic process" evidence=ISO

GO:0006532 "aspartate biosynthetic process" evidence=IDA

GO:0006533 "aspartate catabolic process" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009986 "cell surface" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0019550 "glutamate catabolic process to aspartate" evidence=IDA

GO:0019551 "glutamate catabolic process to 2-oxoglutarate" evidence=IDA

GO:0019899 "enzyme binding" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0031406 "carboxylic acid binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043204 "perikaryon" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0043648 "dicarboxylic acid metabolic process" evidence=ISO

GO:0045471 "response to ethanol" evidence=ISO

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

UNIPROTKB|Q4R559 GOT2 "Aspartate aminotransferase, mitochondrial" [Macaca fascicularis (taxid:9541)]

 Score = 436 (158.5 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
 Identities = 85/122 (69%), Positives = 95/122 (77%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRII MR  L  NL+KEGS 
Sbjct:   309 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGST 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   369 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

UNIPROTKB|P12344 GOT2 "Aspartate aminotransferase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 434 (157.8 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
 Identities = 86/122 (70%), Positives = 95/122 (77%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PPI+GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct:   309 KILIRPMYSNPPINGARIASTILTSPDLRKQWLHEVKGMADRIISMRTQLVSNLKKEGSS 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HI DQIGMFCYTGL   QVE+L KE S+Y+TKDGRIS+AGVTS NV YLA AIH V
Sbjct:   369 HNWQHIIDQIGMFCYTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVAYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0005886 "plasma membrane" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0045471 "response to ethanol" evidence=IEA

GO:0019551 "glutamate catabolic process to 2-oxoglutarate" evidence=IEA

GO:0019550 "glutamate catabolic process to aspartate" evidence=IEA

GO:0015908 "fatty acid transport" evidence=IEA

GO:0006533 "aspartate catabolic process" evidence=IEA

GO:0006532 "aspartate biosynthetic process" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|P00505 GOT2 "Aspartate aminotransferase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 434 (157.8 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
 Identities = 85/122 (69%), Positives = 95/122 (77%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVK MADRII MR  L  NL+KEGS 
Sbjct:   309 KILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKVMADRIIGMRTQLVSNLKKEGST 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HITDQIGMFC+TGL   QVE+LIKE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   369 HNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006107 "oxaloacetate metabolic process" evidence=IEA

GO:0006532 "aspartate biosynthetic process" evidence=IEA

GO:0019550 "glutamate catabolic process to aspartate" evidence=IEA

GO:0019551 "glutamate catabolic process to 2-oxoglutarate" evidence=IEA

GO:0045471 "response to ethanol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=EXP;ISS;IDA

GO:0006533 "aspartate catabolic process" evidence=IDA

GO:0015908 "fatty acid transport" evidence=IEP

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006094 "gluconeogenesis" evidence=TAS

GO:0008652 "cellular amino acid biosynthetic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0019470 "4-hydroxyproline catabolic process" evidence=TAS

UNIPROTKB|P08907 GOT2 "Aspartate aminotransferase, mitochondrial" [Equus caballus (taxid:9796)]

 Score = 437 (158.9 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
 Identities = 85/122 (69%), Positives = 96/122 (78%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct:   280 KILIRPLYSNPPLNGARIASTILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 339

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HI DQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   340 HSWQHIADQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 399

Query:   419 TK 420
             TK
Sbjct:   400 TK 401

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

UNIPROTKB|P00506 GOT2 "Aspartate aminotransferase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 435 (158.2 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
 Identities = 84/122 (68%), Positives = 96/122 (78%)

Query:   299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct:   309 KILIRPMYSNPPVNGARIASTILTSPDLRQQWLQEVKGMADRIISMRTQLVSNLKKEGSS 368

Query:   359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
               W HI DQIGMFC+TG+   QVE+L KE S+Y+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct:   369 HNWQHIVDQIGMFCFTGIKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 428

Query:   419 TK 420
             TK
Sbjct:   429 TK 430

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006536 "glutamate metabolic process" evidence=ISS

GO:0006103 "2-oxoglutarate metabolic process" evidence=ISS

GO:0006531 "aspartate metabolic process" evidence=ISS

GO:0005886 "plasma membrane" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0016212 "kynurenine-oxoglutarate transaminase activity" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	420
PLN02397	423	PLN02397, PLN02397, aspartate transaminase	9e-71
PLN02397	423	PLN02397, PLN02397, aspartate transaminase	8e-69
PTZ00376	404	PTZ00376, PTZ00376, aspartate aminotransferase; Pr	1e-61
PTZ00376	404	PTZ00376, PTZ00376, aspartate aminotransferase; Pr	1e-59
PLN02397	423	PLN02397, PLN02397, aspartate transaminase	5e-54
PTZ00376	404	PTZ00376, PTZ00376, aspartate aminotransferase; Pr	3e-52
PRK09257	396	PRK09257, PRK09257, aromatic amino acid aminotrans	3e-51
PRK09257	396	PRK09257, PRK09257, aromatic amino acid aminotrans	3e-50
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	1e-48
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	7e-48
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	3e-42
PRK09257	396	PRK09257, PRK09257, aromatic amino acid aminotrans	4e-37
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	9e-22
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	9e-22
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	5e-16
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	3e-08
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	3e-08
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	1e-06

>gnl|CDD|215222 PLN02397, PLN02397, aspartate transaminase

 Score =  228 bits (584), Expect = 9e-71
 Identities = 76/122 (62%), Positives = 95/122 (77%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K++ R  YS+PPIHGA IV  ILGDP+L ++W  E+KGMADRIISMRQ L D L+  GS 
Sbjct: 299 KLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSP 358

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W+HIT QIGMF +TGLN  QV+++ KE+ +Y+T+DGRISMAG++SKNV YLA AIHAV
Sbjct: 359 GDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAV 418

Query: 419 TK 420
             
Sbjct: 419 VT 420

Length = 423

>gnl|CDD|215222 PLN02397, PLN02397, aspartate transaminase

 Score =  223 bits (571), Expect = 8e-69
 Identities = 75/119 (63%), Positives = 94/119 (78%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K++ R  YS+PPIHGA IV  ILGDP+L ++W  E+KGMADRIISMRQ L D L+  GS 
Sbjct: 299 KLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSP 358

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             W+HIT QIGMF +TGLN  QV+++ KE+ +Y+T+DGRISMAG++SKNV YLA AIHA
Sbjct: 359 GDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHA 417

Length = 423

>gnl|CDD|240390 PTZ00376, PTZ00376, aspartate aminotransferase; Provisional

 Score =  204 bits (521), Expect = 1e-61
 Identities = 70/122 (57%), Positives = 93/122 (76%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K++IR  YSSPPIHGARI   IL DP+L+A+WL+E+K M+ RI +MRQ L D L+  GS 
Sbjct: 281 KLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSP 340

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HI +QIGMF +TGL   QVE+LI+++ +YL  +GRIS+AG+TSKNV Y+A+AIH V
Sbjct: 341 GDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDV 400

Query: 419 TK 420
            +
Sbjct: 401 VR 402

Length = 404

>gnl|CDD|240390 PTZ00376, PTZ00376, aspartate aminotransferase; Provisional

 Score =  199 bits (508), Expect = 1e-59
 Identities = 69/119 (57%), Positives = 91/119 (76%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K++IR  YSSPPIHGARI   IL DP+L+A+WL+E+K M+ RI +MRQ L D L+  GS 
Sbjct: 281 KLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSP 340

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             W HI +QIGMF +TGL   QVE+LI+++ +YL  +GRIS+AG+TSKNV Y+A+AIH 
Sbjct: 341 GDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHD 399

Length = 404

>gnl|CDD|215222 PLN02397, PLN02397, aspartate transaminase

 Score =  184 bits (470), Expect = 5e-54
 Identities = 67/149 (44%), Positives = 93/149 (62%), Gaps = 21/149 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           +TEAF  D +  K+NLGVGAYR ++GKP VL  V++A++ +L  + +KEY PI G  +F 
Sbjct: 38  VTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFN 97

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           KL+A+LAYG D P +K+N                    +++ VQ +SGTGSLR+GA FL 
Sbjct: 98  KLSAKLAYGADSPAIKEN--------------------RVATVQCLSGTGSLRLGAEFLA 137

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
            F+PG   IY+P PTWGNH  I +  G+ 
Sbjct: 138 RFYPG-STIYIPNPTWGNHHNIFRDAGVP 165

Length = 423

>gnl|CDD|240390 PTZ00376, PTZ00376, aspartate aminotransferase; Provisional

 Score =  179 bits (457), Expect = 3e-52
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 20/149 (13%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L  AFK D + +K+NLG+GAYRD+ GKPYVL SV++A++I+  KNLDKEY PI G   F 
Sbjct: 19  LAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFI 78

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           + A +L +GE    L +                     +I+ VQ +SGTG+LR+G  FLK
Sbjct: 79  EAAQKLLFGEASYALAEK--------------------RIATVQALSGTGALRLGFEFLK 118

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
            F P    +YV  PTW NH+ I K  GL 
Sbjct: 119 RFLPAGTTVYVSNPTWPNHVNIFKSAGLN 147

Length = 404

>gnl|CDD|181731 PRK09257, PRK09257, aromatic amino acid aminotransferase; Provisional

 Score =  176 bits (450), Expect = 3e-51
 Identities = 55/120 (45%), Positives = 80/120 (66%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IR  YS+PP HGA IV  IL DP+L+A+W  E++ M +RI +MRQ L + L+ +G +
Sbjct: 276 KATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPS 335

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF Y+GL   QV++L +E  VY    GRI++AG+   N+ Y+A+AI AV
Sbjct: 336 RDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAV 395

Length = 396

>gnl|CDD|181731 PRK09257, PRK09257, aromatic amino acid aminotransferase; Provisional

 Score =  174 bits (443), Expect = 3e-50
 Identities = 54/119 (45%), Positives = 79/119 (66%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K  IR  YS+PP HGA IV  IL DP+L+A+W  E++ M +RI +MRQ L + L+ +G +
Sbjct: 276 KATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPS 335

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
           + ++ I  Q GMF Y+GL   QV++L +E  VY    GRI++AG+   N+ Y+A+AI A
Sbjct: 336 RDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAA 394

Length = 396

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  169 bits (431), Expect = 1e-48
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K +IR  YS+PP HGA +V  IL +P+L+A+W  E++ M  RI+ MRQ+L D L+  G+ 
Sbjct: 276 KAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAP 335

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF YTGL+  QV++L +E  +YL   GRI++AG+ + N+ Y+AKAI AV
Sbjct: 336 RNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAV 395

Length = 396

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  167 bits (426), Expect = 7e-48
 Identities = 54/122 (44%), Positives = 82/122 (67%)

Query: 3   FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ 62
             +  K +IR  YS+PP HGA +V  IL +P+L+A+W  E++ M  RI+ MRQ+L D L+
Sbjct: 271 VLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALK 330

Query: 63  KEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAK 122
             G+ + ++ I  Q GMF YTGL+  QV++L +E  +YL   GRI++AG+ + N+ Y+AK
Sbjct: 331 ALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAK 390

Query: 123 AI 124
           AI
Sbjct: 391 AI 392

Length = 396

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  152 bits (387), Expect = 3e-42
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 21/149 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L EAFK D   NK+NLG+G Y+D+ GK  VL +VK+A++ +L +   K Y PI G P+F 
Sbjct: 16  LKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFL 75

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           +   +L +G D P L ++                    +++ VQ + GTG+LRV A FL 
Sbjct: 76  EAVQKLLFGADSPALAED--------------------RVATVQTLGGTGALRVAADFLA 115

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
            FFP   V ++  PTW NH  I +  GLE
Sbjct: 116 RFFPDATV-WISDPTWPNHKAIFEAAGLE 143

Length = 396

>gnl|CDD|181731 PRK09257, PRK09257, aromatic amino acid aminotransferase; Provisional

 Score =  138 bits (351), Expect = 4e-37
 Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 21/149 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L EAF+ D   +K+NLGVG Y+D+QG+  VL +VK+A+  +L     K Y PI G   + 
Sbjct: 16  LMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYR 75

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           +   +L +G D P L                 RV        VQ   GTG+LRVGA FLK
Sbjct: 76  QAVQELLFGADSPALAAG--------------RVAT------VQTPGGTGALRVGADFLK 115

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
             FP    ++V  PTW NH  I +  GLE
Sbjct: 116 RAFPD-AKVWVSDPTWPNHRAIFEAAGLE 143

Length = 396

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 95.5 bits (238), Expect = 9e-22
 Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 21/129 (16%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           + L R FYSS   H        L DP L A  L E   M  RI   R  L+D L+  G  
Sbjct: 238 RKLARPFYSS--THLQAAAAAALSDPLLVASELEE---MRQRIKERRDYLRDGLEAAG-- 290

Query: 68  KPWNHITDQIGMFCYTGLNATQVE----KLIKEHSVYLTK--------DGRISMAGVTSK 115
              + +  Q G F  TGL+          L++E  VY+T           RI++AG T +
Sbjct: 291 --LSVLPSQAGFFLLTGLDPEAALALAQVLLEEVGVYVTPGSSFGGPGWLRITVAGGTEE 348

Query: 116 NVGYLAKAI 124
            +  L +AI
Sbjct: 349 ELEELLEAI 357

Length = 357

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 95.5 bits (238), Expect = 9e-22
 Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 21/129 (16%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           + L R FYSS   H        L DP L A  L E   M  RI   R  L+D L+  G  
Sbjct: 238 RKLARPFYSS--THLQAAAAAALSDPLLVASELEE---MRQRIKERRDYLRDGLEAAG-- 290

Query: 359 KPWNHITDQIGMFCYTGLNATQVE----KLIKEHSVYLTK--------DGRISMAGVTSK 406
              + +  Q G F  TGL+          L++E  VY+T           RI++AG T +
Sbjct: 291 --LSVLPSQAGFFLLTGLDPEAALALAQVLLEEVGVYVTPGSSFGGPGWLRITVAGGTEE 348

Query: 407 NVGYLAKAI 415
            +  L +AI
Sbjct: 349 ELEELLEAI 357

Length = 357

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 78.5 bits (194), Expect = 5e-16
 Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 27/153 (17%)

Query: 160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGE 219
            +KINLG   Y  D      LP+V +A++  L       Y P  G P+  +  A+     
Sbjct: 1   TDKINLGSNEYLGDS---GTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLG-- 55

Query: 220 DCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIY 279
             P LK +              R  A      V   SG G+      FL    PG+  I 
Sbjct: 56  RSPVLKLD--------------REAA------VVFGSGAGANIEALIFLLRLNPGD-AIL 94

Query: 280 VPTPTWGNHIPICKHTGLEKILIRAFYSSPPIH 312
           VP PT+ ++I I +  G E +     YSS   H
Sbjct: 95  VPAPTYPSYIRIFRLAGGEVVRYP-LYSSNDFH 126

Length = 357

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 24/133 (18%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K L+    S P           L D +        ++ + +R    R +L + L++ G  
Sbjct: 228 KKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELG-- 279

Query: 68  KPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKDG----------RISMAGVT 113
            P   +    G F +  L        +E+L+ E  V +              R+S A   
Sbjct: 280 -PLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPE 338

Query: 114 SKNVGYLAKAIHA 126
            +      + +  
Sbjct: 339 EELE-EALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 24/133 (18%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K L+    S P           L D +        ++ + +R    R +L + L++ G  
Sbjct: 228 KKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELG-- 279

Query: 359 KPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKDG----------RISMAGVT 404
            P   +    G F +  L        +E+L+ E  V +              R+S A   
Sbjct: 280 -PLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPE 338

Query: 405 SKNVGYLAKAIHA 417
            +      + +  
Sbjct: 339 EELE-EALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 30/136 (22%)

Query: 163 INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCP 222
           I+L +G            P V +A      +     Y P  G P+  +  A+        
Sbjct: 1   IDLSIGEPDFP-----PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGV 55

Query: 223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPT 282
            +                          IV       +L +    L N  PG++V+ VP 
Sbjct: 56  DVPPE----------------------EIVVTNGAQEALSLLLRALLN--PGDEVL-VPD 90

Query: 283 PTWGNHIPICKHTGLE 298
           PT+  +    +  G E
Sbjct: 91  PTYPGYEAAARLAGAE 106

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	420
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	100.0
KOG1411|consensus	427		100.0
KOG1412|consensus	410		100.0
KOG1412|consensus	410		100.0
KOG1411|consensus	427		100.0
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	100.0
PLN02397	423	aspartate transaminase	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.92
PRK08637	388	hypothetical protein; Provisional	99.85
PLN00175	413	aminotransferase family protein; Provisional	99.84
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.83
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.81
PTZ00377	481	alanine aminotransferase; Provisional	99.8
PRK06108	382	aspartate aminotransferase; Provisional	99.8
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.79
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.79
PRK09148	405	aminotransferase; Validated	99.79
PRK06855	433	aminotransferase; Validated	99.78
PRK07681	399	aspartate aminotransferase; Provisional	99.78
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.78
PRK08960	387	hypothetical protein; Provisional	99.78
PLN02656	409	tyrosine transaminase	99.78
PRK07550	386	hypothetical protein; Provisional	99.78
PRK07337	388	aminotransferase; Validated	99.77
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.77
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.77
PRK08068	389	transaminase; Reviewed	99.77
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.77
PRK08636	403	aspartate aminotransferase; Provisional	99.77
PRK06107	402	aspartate aminotransferase; Provisional	99.76
PRK07682	378	hypothetical protein; Validated	99.76
PRK07683	387	aminotransferase A; Validated	99.76
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.76
PRK09082	386	methionine aminotransferase; Validated	99.76
PRK06348	384	aspartate aminotransferase; Provisional	99.75
PRK05957	389	aspartate aminotransferase; Provisional	99.75
PRK05942	394	aspartate aminotransferase; Provisional	99.75
PRK08912	387	hypothetical protein; Provisional	99.75
PLN02231	534	alanine transaminase	99.75
PLN02187	462	rooty/superroot1	99.74
PRK08361	391	aspartate aminotransferase; Provisional	99.74
PRK05764	393	aspartate aminotransferase; Provisional	99.74
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.74
PTZ00433	412	tyrosine aminotransferase; Provisional	99.74
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.73
PRK06290	410	aspartate aminotransferase; Provisional	99.73
PRK08175	395	aminotransferase; Validated	99.72
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.72
PRK07324	373	transaminase; Validated	99.72
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.71
PRK07777	387	aminotransferase; Validated	99.7
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.7
PRK09265	404	aminotransferase AlaT; Validated	99.7
PRK07568	397	aspartate aminotransferase; Provisional	99.7
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.7
PRK06207	405	aspartate aminotransferase; Provisional	99.7
PRK09275	527	aspartate aminotransferase; Provisional	99.7
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.69
PRK12414	384	putative aminotransferase; Provisional	99.69
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.69
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.69
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.69
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.68
PRK08363	398	alanine aminotransferase; Validated	99.68
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.68
KOG0257|consensus	420		99.67
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.66
PLN02397	423	aspartate transaminase	99.66
PRK05839	374	hypothetical protein; Provisional	99.66
PLN02368	407	alanine transaminase	99.62
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.62
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.6
PRK06836	394	aspartate aminotransferase; Provisional	99.6
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.58
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.55
PRK09105	370	putative aminotransferase; Provisional	99.55
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.55
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.54
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.53
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.52
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.52
PRK07908	349	hypothetical protein; Provisional	99.51
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.49
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.46
PTZ00376	404	aspartate aminotransferase; Provisional	99.46
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.46
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.45
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.45
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.45
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.43
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.43
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.42
KOG0256|consensus	471		99.42
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.41
PRK06225	380	aspartate aminotransferase; Provisional	99.4
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.39
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.39
PLN02672	1082	methionine S-methyltransferase	99.38
KOG0259|consensus	447		99.38
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.36
PRK03321	352	putative aminotransferase; Provisional	99.35
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.34
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.31
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.29
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.23
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.2
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.17
KOG0634|consensus	472		99.14
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.1
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.06
PRK08354	311	putative aminotransferase; Provisional	99.04
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	98.97
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	98.95
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	98.93
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	98.93
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	98.91
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	98.89
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	98.77
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	98.69
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	98.64
PLN02721	353	threonine aldolase	98.58
PLN02822	481	serine palmitoyltransferase	98.5
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	98.49
PRK10534	333	L-threonine aldolase; Provisional	98.48
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	98.43
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	98.39
PLN02483	489	serine palmitoyltransferase	98.39
KOG0258|consensus	475		98.38
PRK10874	401	cysteine sulfinate desulfinase; Provisional	98.36
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	98.36
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	98.36
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	98.34
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	98.29
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	98.27
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	98.25
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	98.23
PRK00451	447	glycine dehydrogenase subunit 1; Validated	98.18
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	98.18
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	98.15
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	98.08
PRK02948	381	cysteine desulfurase; Provisional	98.06
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	98.04
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	98.03
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	98.0
PRK13392	410	5-aminolevulinate synthase; Provisional	98.0
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	97.98
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	97.96
PRK02627	396	acetylornithine aminotransferase; Provisional	97.96
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	97.91
PRK08637	388	hypothetical protein; Provisional	97.81
PRK13520	371	L-tyrosine decarboxylase; Provisional	97.79
PRK01278	389	argD acetylornithine transaminase protein; Provisi	97.76
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	97.76
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	97.73
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	97.7
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	97.67
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	97.64
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	97.63
PRK03244	398	argD acetylornithine aminotransferase; Provisional	97.56
PLN02409	401	serine--glyoxylate aminotransaminase	97.55
PRK07179	407	hypothetical protein; Provisional	97.53
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	97.53
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	97.52
cd00609	350	AAT_like Aspartate aminotransferase family. This f	97.51
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	97.48
PRK02936	377	argD acetylornithine aminotransferase; Provisional	97.47
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	97.45
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	97.44
PRK04366	481	glycine dehydrogenase subunit 2; Validated	97.3
PRK06108	382	aspartate aminotransferase; Provisional	97.29
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	97.26
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	97.26
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	97.2
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	97.16
PRK04260	375	acetylornithine aminotransferase; Provisional	97.13
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	97.13
PRK09064	407	5-aminolevulinate synthase; Validated	97.08
PRK14012	404	cysteine desulfurase; Provisional	97.08
PRK13393	406	5-aminolevulinate synthase; Provisional	97.07
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	96.92
PRK07550	386	hypothetical protein; Provisional	96.9
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	96.85
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	96.85
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	96.79
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	96.75
PRK05957	389	aspartate aminotransferase; Provisional	96.72
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	96.72
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	96.67
PRK13034	416	serine hydroxymethyltransferase; Reviewed	96.65
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	96.49
PLN02271	586	serine hydroxymethyltransferase	96.44
PRK08088	425	4-aminobutyrate aminotransferase; Validated	96.32
PLN02242	418	methionine gamma-lyase	96.27
PRK08247	366	cystathionine gamma-synthase; Reviewed	96.25
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	96.19
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	96.17
PRK06234	400	methionine gamma-lyase; Provisional	96.08
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	96.06
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	96.04
PRK05764	393	aspartate aminotransferase; Provisional	96.0
PRK07681	399	aspartate aminotransferase; Provisional	95.98
PRK07582	366	cystathionine gamma-lyase; Validated	95.92
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	95.91
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	95.88
PLN02651	364	cysteine desulfurase	95.82
PTZ00377	481	alanine aminotransferase; Provisional	95.77
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	95.69
PRK09105	370	putative aminotransferase; Provisional	95.67
PRK07682	378	hypothetical protein; Validated	95.63
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	95.51
PRK08068	389	transaminase; Reviewed	95.36
PLN03226	475	serine hydroxymethyltransferase; Provisional	95.26
PRK09148	405	aminotransferase; Validated	95.14
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	95.09
PTZ00433	412	tyrosine aminotransferase; Provisional	95.06
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	94.88
PLN02231	534	alanine transaminase	94.83
PLN00144	382	acetylornithine transaminase	94.57
PRK13580	493	serine hydroxymethyltransferase; Provisional	94.51
PRK07324	373	transaminase; Validated	94.48
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	94.45
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	94.44
PRK09028	394	cystathionine beta-lyase; Provisional	94.32
PRK08175	395	aminotransferase; Validated	94.28
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	94.25
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	94.13
PRK07050	394	cystathionine beta-lyase; Provisional	94.05
PRK09082	386	methionine aminotransferase; Validated	93.98
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	93.95
PRK06855	433	aminotransferase; Validated	93.92
PRK08636	403	aspartate aminotransferase; Provisional	93.8
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	93.74
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	93.7
PTZ00125	400	ornithine aminotransferase-like protein; Provision	93.61
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	93.49
PRK07777	387	aminotransferase; Validated	93.44
PTZ00094	452	serine hydroxymethyltransferase; Provisional	93.34
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	93.23
PRK07366	388	succinyldiaminopimelate transaminase; Validated	92.94
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	92.86
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	92.82
PRK08912	387	hypothetical protein; Provisional	92.74
PRK05942	394	aspartate aminotransferase; Provisional	92.74
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	92.68
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	92.67
PRK06348	384	aspartate aminotransferase; Provisional	92.66
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	92.34
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	92.34
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	92.32
PRK07309	391	aromatic amino acid aminotransferase; Validated	92.25
PRK09265	404	aminotransferase AlaT; Validated	92.13
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	92.13
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	92.1
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	92.08
PLN02414	993	glycine dehydrogenase (decarboxylating)	92.04
PRK06290	410	aspartate aminotransferase; Provisional	92.01
PRK06207	405	aspartate aminotransferase; Provisional	91.97
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	91.96
PRK06107	402	aspartate aminotransferase; Provisional	91.94
PRK05939	397	hypothetical protein; Provisional	91.84
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	91.82
PRK06836	394	aspartate aminotransferase; Provisional	91.79
PRK07683	387	aminotransferase A; Validated	91.69
PRK08363	398	alanine aminotransferase; Validated	91.49
PRK07811	388	cystathionine gamma-synthase; Provisional	91.4
PRK05367	954	glycine dehydrogenase; Provisional	91.39
PRK08960	387	hypothetical protein; Provisional	91.38
PRK07503	403	methionine gamma-lyase; Provisional	91.19
PLN00175	413	aminotransferase family protein; Provisional	91.18
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	91.17
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	91.12
PRK05967	395	cystathionine beta-lyase; Provisional	91.12
PRK08361	391	aspartate aminotransferase; Provisional	91.08
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	90.98
PRK05367	954	glycine dehydrogenase; Provisional	90.93
PRK06767	386	methionine gamma-lyase; Provisional	90.82
PRK07049	427	methionine gamma-lyase; Validated	90.81
PRK04260	375	acetylornithine aminotransferase; Provisional	90.8
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	90.65
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	90.52
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	90.46
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	90.46
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	90.46
PRK02731	367	histidinol-phosphate aminotransferase; Validated	90.42
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	90.23
PRK07337	388	aminotransferase; Validated	90.22
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	90.22
TIGR01814	406	kynureninase kynureninase. This model describes ky	90.06
PRK12414	384	putative aminotransferase; Provisional	89.88
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	89.79
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	89.71
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	89.64
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	89.55
PRK08056	356	threonine-phosphate decarboxylase; Provisional	89.54
PRK13392	410	5-aminolevulinate synthase; Provisional	89.43
PRK07908	349	hypothetical protein; Provisional	89.41
PRK08045	386	cystathionine gamma-synthase; Provisional	89.34
PRK02936	377	argD acetylornithine aminotransferase; Provisional	89.33
PRK09064	407	5-aminolevulinate synthase; Validated	89.29
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	89.29
PRK08574	385	cystathionine gamma-synthase; Provisional	89.21
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	89.19
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	89.07
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	89.04
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	89.04
PLN02656	409	tyrosine transaminase	88.96
PRK10874	401	cysteine sulfinate desulfinase; Provisional	88.94
PRK08249	398	cystathionine gamma-synthase; Provisional	88.92
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	88.84
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	88.83
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	88.81
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	88.5
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	88.43
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	88.35
PLN02509	464	cystathionine beta-lyase	88.27
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	88.16
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	88.14
KOG0633|consensus	375		88.07
PRK00950	361	histidinol-phosphate aminotransferase; Validated	87.88
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	87.69
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	87.64
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	87.6
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	87.47
PRK08776	405	cystathionine gamma-synthase; Provisional	87.34
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	87.21
PLN02624	474	ornithine-delta-aminotransferase	87.02
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	86.92
PTZ00094	452	serine hydroxymethyltransferase; Provisional	86.81
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	86.11
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	86.03
PLN02187	462	rooty/superroot1	86.03
PRK04612	408	argD acetylornithine transaminase protein; Provisi	85.85
PRK05968	389	hypothetical protein; Provisional	85.8
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	85.78
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	85.67
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	85.66
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	85.62
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	85.5
PLN02822	481	serine palmitoyltransferase	85.49
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	85.46
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	85.43
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	85.42
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	85.41
PRK04311	464	selenocysteine synthase; Provisional	85.32
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	85.24
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	85.09
PRK13520	371	L-tyrosine decarboxylase; Provisional	85.03
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	85.01
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	84.96
PRK03080	378	phosphoserine aminotransferase; Provisional	84.81
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	84.53
TIGR01814	406	kynureninase kynureninase. This model describes ky	84.48
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	84.42
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	84.4
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	84.37
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	84.34
PLN02721	353	threonine aldolase	84.22
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	84.16
PLN02672	1082	methionine S-methyltransferase	84.05
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	83.9
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	83.79
PRK02948	381	cysteine desulfurase; Provisional	83.71
PLN02452	365	phosphoserine transaminase	83.65
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	83.62
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	83.61
PRK06460	376	hypothetical protein; Provisional	83.56
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	83.54
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	83.01
PLN02368	407	alanine transaminase	82.94
PRK07568	397	aspartate aminotransferase; Provisional	82.62
PLN00144	382	acetylornithine transaminase	82.24
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	82.23
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	81.77
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	81.76
PRK08861	388	cystathionine gamma-synthase; Provisional	81.63
PRK03080	378	phosphoserine aminotransferase; Provisional	81.55
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	81.48
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	81.07
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	81.02
PRK07671	377	cystathionine beta-lyase; Provisional	80.65
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	80.6
PRK01533	366	histidinol-phosphate aminotransferase; Validated	80.54
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	80.49
PRK08064	390	cystathionine beta-lyase; Provisional	80.44
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	80.22
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	80.06

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.9e-68  Score=528.41  Aligned_cols=260  Identities=43%  Similarity=0.780  Sum_probs=254.3

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ++..+.|||++|.++|++|++++|||||||+|+|++|++|++++|++|++.+.+++.++.|+|+.|+++|++++++++||
T Consensus         5 i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG   84 (396)
T COG1448           5 IEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFG   84 (396)
T ss_pred             cccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcC
Confidence            67788999999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+++.+.++||++                    +||+||||||++++.|++.+.| ..+||||||+||||..||+.+|++
T Consensus        85 ~d~~~l~~~Rv~t--------------------~Qt~GGTGAL~~~A~fl~~~~~-~~~vwis~PtW~NH~~If~~aGl~  143 (396)
T COG1448          85 ADSPALAEDRVAT--------------------VQTLGGTGALRVAADFLARFFP-DATVWISDPTWPNHKAIFEAAGLE  143 (396)
T ss_pred             CCcHHHHhhhHhh--------------------eecCCcchHHHHHHHHHHHhCC-CceEEeCCCCcHhHHHHHHhcCCc
Confidence            9999999999999                    9999999999999999999999 788999999999999999999997


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       144 v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Glee  223 (396)
T COG1448         144 VETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEE  223 (396)
T ss_pred             eeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHH
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 ----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 ----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                                          +.++|++|||||.||+++|++||+||+|
T Consensus       224 Da~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~L  303 (396)
T COG1448         224 DAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPEL  303 (396)
T ss_pred             HHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHH
Confidence                                                                7889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK  406 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~  406 (420)
                      +++|++|++.|++||.+||..|++.|++.|.+.+|+|+..|.|||+|+|++++||++|++||+||++.+||||+||+|++
T Consensus       304 ra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~  383 (396)
T COG1448         304 RAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTS  383 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      ||+|+|+||.+|+
T Consensus       384 ni~~va~ai~~v~  396 (396)
T COG1448         384 NIDYVAKAIAAVL  396 (396)
T ss_pred             hHHHHHHHHHhhC
Confidence            9999999999874

>KOG1411|consensus

Probab=100.00  E-value=1.5e-68  Score=523.51  Aligned_cols=271  Identities=61%  Similarity=0.959  Sum_probs=259.0

Q ss_pred             CCcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707        129 SLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF  208 (420)
Q Consensus       129 ~~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f  208 (420)
                      +-++...-..++-.++|||++++++|++|++++|||||+|+|||++|+|.++++|++|++++...+.++||+||.|+++|
T Consensus        21 ~~~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF  100 (427)
T KOG1411|consen   21 SARASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEF  100 (427)
T ss_pred             cccccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHH
Confidence            33333333346777899999999999999999999999999999999999999999999998877889999999999999


Q ss_pred             HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      .+..++++||++++.++++||++                    +||++|||||++++.||+.+.| +.+||||+|+|.||
T Consensus       101 ~k~sakLa~G~~s~~ik~~Ri~t--------------------vQ~lSGTGaLriga~Fl~~f~~-~~~I~ip~PTWgNh  159 (427)
T KOG1411|consen  101 NKLSAKLALGDNSPVIKEKRIVT--------------------VQTLSGTGALRVGAEFLARFYP-SRDIYIPDPTWGNH  159 (427)
T ss_pred             HHHHHHHhhcCCchhhhccceeE--------------------EEeccCcchhhHHHHHHHhhcc-ccceeecCCccccc
Confidence            99999999999999999999999                    9999999999999999999999 89999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ..+|+.+|+.                                                                      
T Consensus       160 ~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA  239 (427)
T KOG1411|consen  160 KNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA  239 (427)
T ss_pred             CccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh
Confidence            9999999986                                                                      


Q ss_pred             ---------------------------------------------------------------hhhhhhccCCCchHHHH
Q psy16707        299 ---------------------------------------------------------------KILIRAFYSSPPIHGAR  315 (420)
Q Consensus       299 ---------------------------------------------------------------~~~~r~~~s~pp~~ga~  315 (420)
                                                                                     +.++|.+|||||.||++
T Consensus       240 YQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGAr  319 (427)
T KOG1411|consen  240 YQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGAR  319 (427)
T ss_pred             hcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchh
Confidence                                                                           67889999999999999


Q ss_pred             HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC
Q psy16707        316 IVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD  395 (420)
Q Consensus       316 iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~  395 (420)
                      ||++||+||+|+++|..|++.|.+||..||+.|++.|++.|++++|+||++|.|||||+|++++||+.|.+|||||++.+
T Consensus       320 Iv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~d  399 (427)
T KOG1411|consen  320 IVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKD  399 (427)
T ss_pred             hhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        396 GRISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 gRis~agl~~~ni~~la~AI~~vv~  420 (420)
                      ||||++|++++|++|+|+||++|++
T Consensus       400 GRiS~aG~ss~nV~yLa~aih~vtk  424 (427)
T KOG1411|consen  400 GRISMAGLSSSNVPYLADAIHAVTK  424 (427)
T ss_pred             ceEeeccccccCCcccchhhHhHhc
Confidence            9999999999999999999999874

>KOG1412|consensus

Probab=100.00  E-value=2.8e-66  Score=502.12  Aligned_cols=261  Identities=44%  Similarity=0.811  Sum_probs=254.4

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++..+++.+|.+++.|.+|..+.||||+||+||+++|+||++|+|++++..+.++ ..+|+|+|+.|++.|+++++++++
T Consensus         9 I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~l   88 (410)
T KOG1412|consen    9 IPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLL   88 (410)
T ss_pred             CccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhc
Confidence            6778899999999999999999999999999999999999999999999999877 679999999999999999999999


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      |.++++++++|+.+                    ||++|||||+++++.||..+.+ ..+||+++|+|+||..+|+.+|+
T Consensus        89 g~~s~a~kE~Rv~~--------------------vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf  147 (410)
T KOG1412|consen   89 GADSPAIKEDRVFG--------------------VQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGF  147 (410)
T ss_pred             CCCchhhhhccccc--------------------eeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCC
Confidence            99999999999999                    9999999999999999999998 79999999999999999999997


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      .                                                                               
T Consensus       148 ~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD  227 (410)
T KOG1412|consen  148 TTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGD  227 (410)
T ss_pred             ceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCC
Confidence            5                                                                               


Q ss_pred             -------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCC
Q psy16707        299 -------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGD  323 (420)
Q Consensus       299 -------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~d  323 (420)
                                                                             ..++|++|||||++||+||+.+|++
T Consensus       228 ~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~t  307 (410)
T KOG1412|consen  228 LDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLST  307 (410)
T ss_pred             ccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcC
Confidence                                                                   6778999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEccc
Q psy16707        324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGV  403 (420)
Q Consensus       324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl  403 (420)
                      |+|+++|.+.++.|+.||++||.+|++.|.++|+||+|+||++|.|||+|+||++.||++|.++|+||+.++||||+|||
T Consensus       308 P~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGL  387 (410)
T KOG1412|consen  308 PELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGL  387 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhC
Q psy16707        404 TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv~  420 (420)
                      |.+|++|+|+||+++||
T Consensus       388 N~~NveyVAkAIde~Vr  404 (410)
T KOG1412|consen  388 NMKNVEYVAKAIDETVR  404 (410)
T ss_pred             ccccHHHHHHHHHHHHH
Confidence            99999999999999986

>KOG1412|consensus

Probab=100.00  E-value=4.5e-44  Score=347.53  Aligned_cols=125  Identities=46%  Similarity=0.840  Sum_probs=123.4

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      ++.||..++|.+|||||+||||||++||++|+|+++|.+++++|+.||++||++|.+.|..++|||+||||++|.|||||
T Consensus       278 v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSy  357 (410)
T KOG1412|consen  278 VKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSY  357 (410)
T ss_pred             HHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceee
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      |||||.||+.|.++||||++.+|||||+|||.+||||||+||+++
T Consensus       358 TGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAIde~  402 (410)
T KOG1412|consen  358 TGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAIDET  402 (410)
T ss_pred             cCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999986

>KOG1411|consensus

Probab=100.00  E-value=1.5e-44  Score=354.79  Aligned_cols=126  Identities=68%  Similarity=1.047  Sum_probs=123.9

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ..||+.++|+||||||.||||||++||+||+|+++|..|++.|.+||+.||++|++.|++.+++++|+||++|.||||||
T Consensus       299 ~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fT  378 (427)
T KOG1411|consen  299 ESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFT  378 (427)
T ss_pred             HHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeec
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhCC
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANGS  129 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~~  129 (420)
                      ||+||||+.|++||||||+.|||||+||+|++||+|+|+||++|-+
T Consensus       379 gl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~vtk  424 (427)
T KOG1411|consen  379 GLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAVTK  424 (427)
T ss_pred             CCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhHhc
Confidence            9999999999999999999999999999999999999999999954

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=9.2e-44  Score=354.70  Aligned_cols=125  Identities=44%  Similarity=0.773  Sum_probs=123.3

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      ++.||+.++|++|||||.|||+||++||+||+||++|++||++||+||++||+.|++.|++++++++|+||.+|+|||||
T Consensus       271 v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy  350 (396)
T COG1448         271 VLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSY  350 (396)
T ss_pred             HHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeec
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +|||++||++||++|+||++.+|||||||||++||+|||+||.+|
T Consensus       351 ~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v  395 (396)
T COG1448         351 TGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             CCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999987

>PLN02397 aspartate transaminase

Probab=100.00  E-value=1.9e-34  Score=298.24  Aligned_cols=260  Identities=54%  Similarity=0.915  Sum_probs=228.7

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +...+.|+|+.+.+.+++|..+.+|||++|.|.|+++.|++.+.++++...+......++|+|..|+++||+++++++++
T Consensus        27 ~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~  106 (423)
T PLN02397         27 VEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYG  106 (423)
T ss_pred             CCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcC
Confidence            56777899999999999999999999999999999998889999999988775434556899999999999999999988


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+.+.+.+++|..                    +++++|+|+..+...++..+.| ||+|++++|+|++|..+++.+|++
T Consensus       107 ~~~~~~~~~~i~~--------------------~~i~~g~Ga~~l~~~~~~~~~p-Gd~Vlv~~P~y~~y~~~~~~~g~~  165 (423)
T PLN02397        107 ADSPAIKENRVAT--------------------VQCLSGTGSLRLGAEFLARFYP-GSTIYIPNPTWGNHHNIFRDAGVP  165 (423)
T ss_pred             CCCchhhcCeeEe--------------------eecccchHHHHHHHHHHHHhCC-CCEEEEeCCCchhHHHHHHHcCCe
Confidence            7655555555655                    7789999998877777776778 999999999999999999988764


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       166 ~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~  245 (423)
T PLN02397        166 VRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLD  245 (423)
T ss_pred             EEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchh
Confidence                                                                                            


Q ss_pred             -----------------------------------h------------------hhhhhccCCCchHHHHHHHHHhCChh
Q psy16707        299 -----------------------------------K------------------ILIRAFYSSPPIHGARIVQEILGDPK  325 (420)
Q Consensus       299 -----------------------------------~------------------~~~r~~~s~pp~~ga~iv~~IL~dp~  325 (420)
                                                         .                  .+.+..++++|.++|.+++.+|++++
T Consensus       246 ~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~  325 (423)
T PLN02397        246 ADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE  325 (423)
T ss_pred             hhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH
Confidence                                               0                  11124467889999999999999988


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCC
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTS  405 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~  405 (420)
                      +.++|.++++.|+++|+++|+.+++.|+++|.++.|.++.+++|||.|+.++.+|+++|++++||+++++||||+|+++.
T Consensus       326 ~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~  405 (423)
T PLN02397        326 LFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRISMAGLSS  405 (423)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEeeCCH
Confidence            88899999999999999999999999999987778998899999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      +++++++++|++||
T Consensus       406 ~~i~~~~~~i~~~~  419 (423)
T PLN02397        406 KNVPYLADAIHAVV  419 (423)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999987

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=6.7e-32  Score=275.79  Aligned_cols=260  Identities=42%  Similarity=0.730  Sum_probs=225.9

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+++|+++.+...++.+..+++|||++|.+.++++.+++.+.+++|...+..+....+|.|..|.++||+++++++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   84 (396)
T PRK09257          5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFG   84 (396)
T ss_pred             CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcC
Confidence            56788899999999998887889999999998788887776789999988876544456899999999999999999988


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .....+++++|.+                    +.|.|+++|+.+++.++..+.| ||+|++++|+|+.|..+++.+|++
T Consensus        85 ~~~~~~~~~~i~v--------------------~iT~Ga~~al~~~~~~l~~~~p-Gd~Vlv~~P~y~~~~~~~~~~g~~  143 (396)
T PRK09257         85 ADSPALAAGRVAT--------------------VQTPGGTGALRVGADFLKRAFP-DAKVWVSDPTWPNHRAIFEAAGLE  143 (396)
T ss_pred             CCCcccccCeEEE--------------------EecCCccHHHHHHHHHHHHhCC-CCeEEECCCCcccHHHHHHHcCCc
Confidence            7655556666633                    7899999999999877765678 999999999999999999998875


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       144 ~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~  223 (396)
T PRK09257        144 VKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEE  223 (396)
T ss_pred             EEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHH
Confidence                                                                                            


Q ss_pred             -----------------------------------h-----------------hhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 -----------------------------------K-----------------ILIRAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 -----------------------------------~-----------------~~~r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                         .                 ...+..++++|.+.|.+++.+|+++++
T Consensus       224 ~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  303 (396)
T PRK09257        224 DAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPEL  303 (396)
T ss_pred             HHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHH
Confidence                                               0                 112356788889999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK  406 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~  406 (420)
                      .+.|.++++.++++|+++|+.+.+.|++.+.++.|.+..+++|||.|+.++++++++|++++||++.|.|||++|+++++
T Consensus       304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~  383 (396)
T PRK09257        304 RAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNES  383 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHH
Confidence            88899999999999999999999999998755458888899999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      +|++++++|++|+
T Consensus       384 ~i~~~~~~i~~~~  396 (396)
T PRK09257        384 NIDYVAEAIAAVL  396 (396)
T ss_pred             HHHHHHHHHHhhC
Confidence            9999999999874

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-31  Score=273.99  Aligned_cols=260  Identities=51%  Similarity=0.833  Sum_probs=223.3

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+.+++++.+.+.++++..+++|||++|.+.|+++...+.+.+++|...+.......+|.|..|+++||+++++++.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   87 (404)
T PTZ00376          8 VPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFG   87 (404)
T ss_pred             CCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcC
Confidence            45677889999999888777789999999987677776677888998887765333458999999999999999999988


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .++..+++++|..                    .+|.||+||+.++..++. .+.| ||+|++++|+|++|..+++.+|+
T Consensus        88 ~~~~~~~~~~v~~--------------------~~t~G~~~al~~~~~~l~~~~~~-Gd~Vlv~~P~y~~~~~~~~~~G~  146 (404)
T PTZ00376         88 EASYALAEKRIAT--------------------VQALSGTGALRLGFEFLKRFLPA-GTTVYVSNPTWPNHVNIFKSAGL  146 (404)
T ss_pred             CCccccccCeEEE--------------------eeccCcchHHHHHHHHHHHhcCC-CCEEEEcCCCchhHHHHHHHcCC
Confidence            7655566777754                    579999999998876442 3457 99999999999999999999887


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       147 ~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~  226 (404)
T PTZ00376        147 NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDL  226 (404)
T ss_pred             ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCH
Confidence            5                                                                               


Q ss_pred             ------------------------------------h-----------hh-------hhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------K-----------IL-------IRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------~-----------~~-------~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                          .           .+       .++.|+++|..+|.++..+|+++
T Consensus       227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~  306 (404)
T PTZ00376        227 DKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDP  306 (404)
T ss_pred             HHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCH
Confidence                                                0           11       24567888889999999999998


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccC
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVT  404 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~  404 (420)
                      ++..+|.++++.++++++++|+.+.+.|++.+.++.|.++.+++|||.|+.++.+++++|++++||++.|+||||+|+++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~  386 (404)
T PTZ00376        307 ELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLT  386 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccC
Confidence            88788999999999999999999999999988776688888999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHh
Q psy16707        405 SKNVGYLAKAIHAVT  419 (420)
Q Consensus       405 ~~ni~~la~AI~~vv  419 (420)
                      .+++++++++|++++
T Consensus       387 ~~~~~~~~~~l~~~~  401 (404)
T PTZ00376        387 SKNVDYVAEAIHDVV  401 (404)
T ss_pred             HHhHHHHHHHHHHHH
Confidence            999999999999986

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=1e-23  Score=216.89  Aligned_cols=228  Identities=17%  Similarity=0.213  Sum_probs=177.2

Q ss_pred             HHHccCC-CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707        153 AFKKDTN-VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISI  231 (420)
Q Consensus       153 ~~~~d~~-~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~  231 (420)
                      .+.+... .++|||++|.   |  +.++++.+++|......+... .|+|..|+++||+++++++...++..+.++.   
T Consensus        20 ~~~~~~~~~~vi~l~iG~---P--d~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~---   90 (393)
T COG0436          20 AAAELKGKEDVIDLSIGE---P--DFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEE---   90 (393)
T ss_pred             HHHHhcCCCCEEEeCCCC---C--CCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---
Confidence            4433333 5899999997   4  558888888888876654223 8889999999999999999666543334433   


Q ss_pred             ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------
Q psy16707        232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------  298 (420)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------  298 (420)
                                        ||+.|.|+++|+.+++..+  ++| ||+|++|+|+|++|..+++.+|++             
T Consensus        91 ------------------eiivt~Ga~~al~~~~~a~--~~p-GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f  149 (393)
T COG0436          91 ------------------EIIVTAGAKEALFLAFLAL--LNP-GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGF  149 (393)
T ss_pred             ------------------eEEEeCCHHHHHHHHHHHh--cCC-CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCC
Confidence                              2478999999999998755  568 999999999999999999999875             


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       150 ~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i  229 (393)
T COG0436         150 KPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTI  229 (393)
T ss_pred             cCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEE
Confidence                                                                                            


Q ss_pred             ------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL  348 (420)
Q Consensus       299 ------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l  348 (420)
                                                    ..+.....+|+|..+|.++...|++++   + .++++.|+++|++||+.+
T Consensus       230 ~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~---~-~~~~~~~~~~~~~rrd~l  305 (393)
T COG0436         230 TINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQ---S-DEVVEEMREEYRERRDLL  305 (393)
T ss_pred             EEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCcc---c-hHHHHHHHHHHHHHHHHH
Confidence                                          335566778999999999998898763   2 356777889999999999


Q ss_pred             HHHHHhcCCCCCCcccC-CCCceEEecCCC-----HHHHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHH
Q psy16707        349 KDNLQKEGSNKPWNHIT-DQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYL  411 (420)
Q Consensus       349 ~~~L~~~g~~~~w~~i~-~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~l  411 (420)
                      ++.|.+.+.   |.... ++++||.|..++     .+++++|++++||.++||       |    |||++.-. +.++..
T Consensus       306 ~~~l~~~~g---~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~-~~l~~a  381 (393)
T COG0436         306 VEALNEIGG---LSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSE-ETLEEA  381 (393)
T ss_pred             HHHHHhcCC---eeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCH-HHHHHH
Confidence            999998764   78777 556777786443     578999999999999995       2    99999433 666666


Q ss_pred             HHHHHHH
Q psy16707        412 AKAIHAV  418 (420)
Q Consensus       412 a~AI~~v  418 (420)
                      .+.|.+.
T Consensus       382 ~~rl~~~  388 (393)
T COG0436         382 LRRLARF  388 (393)
T ss_pred             HHHHHHH
Confidence            6655554

>PRK08637 hypothetical protein; Provisional

Probab=99.85  E-value=1.9e-19  Score=183.76  Aligned_cols=233  Identities=19%  Similarity=0.202  Sum_probs=181.2

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..+|+|++||.|.|+. .+++.+.++++...... ...+.|.|..|.++||+++++++..... .+.++.+         
T Consensus         2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~---------   69 (388)
T PRK08637          2 KATKYNATIGMATEKG-GPMYLSSLQDLLNDLTP-DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKM---------   69 (388)
T ss_pred             CccceecceeeEecCC-CcchHHHHHHHHHhhcc-ccccCCCCCCCCHHHHHHHHHHHhccCc-ccccccc---------
Confidence            4689999999996665 58999999999887543 4678999999999999999999876431 1221111         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh-hcCcc-------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK-HTGLE-------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~-~aG~~-------------------  298 (420)
                                .+|+.|.|+++++++++.++.  .| ||.|++++|+|++|...+. ..|++                   
T Consensus        70 ----------~~I~it~G~~~al~~~~~~l~--~~-gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~  136 (388)
T PRK08637         70 ----------SLPIVTNALTHGLSLVADLFV--DQ-GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALK  136 (388)
T ss_pred             ----------ceeeEccchHHHHHHHHHHhc--CC-CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHH
Confidence                      134789999999999988664  47 9999999999999998764 56654                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       137 ~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~  216 (388)
T PRK08637        137 EALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSN  216 (388)
T ss_pred             HHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhccccc
Confidence                                                                                            


Q ss_pred             -------------------------h-----------hhh-------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707        299 -------------------------K-----------ILI-------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK  335 (420)
Q Consensus       299 -------------------------~-----------~~~-------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~  335 (420)
                                               .           .+.       +..++++|...|.++..+|+++    .|.++++
T Consensus       217 vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~----~~~~~~~  292 (388)
T PRK08637        217 ILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSP----EFDKEKQ  292 (388)
T ss_pred             ceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCH----HHHHHHH
Confidence                                     1           011       1234567888888888888764    6777888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC----CcEEEcccCCCC
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD----GRISMAGVTSKN  407 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~----gRis~agl~~~n  407 (420)
                      .++.+++++++.+.+.|+..+.+..|.+.++++|+|.|+.++    .+++++|++++||.+.+.    .|||++..+.++
T Consensus       293 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~  372 (388)
T PRK08637        293 EKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEED  372 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHH
Confidence            888899999999999998775555688888899999998765    356688888999998753    399999999999


Q ss_pred             HHHHHHHHHHHhC
Q psy16707        408 VGYLAKAIHAVTK  420 (420)
Q Consensus       408 i~~la~AI~~vv~  420 (420)
                      +++..+.|.++++
T Consensus       373 i~~~~~~l~~~~~  385 (388)
T PRK08637        373 IPELFDSIYKAIK  385 (388)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888887753

>PLN00175 aminotransferase family protein; Provisional

Probab=99.84  E-value=5.6e-19  Score=182.39  Aligned_cols=245  Identities=15%  Similarity=0.123  Sum_probs=182.6

Q ss_pred             CcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        130 LPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       130 ~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      .++.++++ +..+..+++..+.+....   .+.|||++|.   |+  +++++.++++......+ ....|.|..|.++||
T Consensus        28 ~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~G~---P~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~Lr   97 (413)
T PLN00175         28 QPLQVAKR-LEKFKTTIFTQMSSLAIK---HGAINLGQGF---PN--FDGPDFVKEAAIQAIRD-GKNQYARGFGVPELN   97 (413)
T ss_pred             cccchhHH-hhcCCCCHHHHHHHHhhc---CCeEecCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCcCCCCCCHHHH
Confidence            34456666 778888888777766532   4799999997   54  45678888888777654 457899999999999


Q ss_pred             HHHHHHHcCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        210 KLAAQLAYGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +++++++....+..++++ .|                      +.|.|+++|+.+++..+  +.| ||+|++++|+|+.|
T Consensus        98 ~aia~~~~~~~g~~~~~~~~I----------------------~vt~G~~~al~~~~~~l--~~~-gd~Vlv~~P~y~~~  152 (413)
T PLN00175         98 SAIAERFKKDTGLVVDPEKEV----------------------TVTSGCTEAIAATILGL--INP-GDEVILFAPFYDSY  152 (413)
T ss_pred             HHHHHHHHHHhCCCCCCCCCE----------------------EEeCCHHHHHHHHHHHh--CCC-CCEEEEeCCCchhH
Confidence            999999854333223443 34                      56999999999887644  568 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++..|++                                                                      
T Consensus       153 ~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l  232 (413)
T PLN00175        153 EATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKL  232 (413)
T ss_pred             HHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCcc
Confidence            9999988875                                                                      


Q ss_pred             -------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707        299 -------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQ  329 (420)
Q Consensus       299 -------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~  329 (420)
                                                                       .........+++...|.++...|.++   ..
T Consensus       233 ~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~  309 (413)
T PLN00175        233 AFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAP---ES  309 (413)
T ss_pred             ccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC---HH
Confidence                                                             11112233456777888888878653   23


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------C-HHHHHHHHHhCCeEEeCC-------
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIKEHSVYLTKD-------  395 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~-~~~v~~Ll~e~~Vy~~p~-------  395 (420)
                         .++.++..|+++|+.+.+.|++.|    +....+++|||.|+.+      + .++++.|++++||.+.|+       
T Consensus       310 ---~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~  382 (413)
T PLN00175        310 ---YYEELKRDYSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNP  382 (413)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC
Confidence               455666899999999999999886    4556778899999643      2 367789999999999984       


Q ss_pred             --C----cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        396 --G----RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 --g----Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                        +    ||+++. ++++++...+.|.++++
T Consensus       383 ~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        383 EDGKNLVRFAFCK-DEETLRAAVERMKTKLK  412 (413)
T ss_pred             CCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence              1    999984 77777777777776553

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.83  E-value=6.2e-19  Score=180.45  Aligned_cols=241  Identities=18%  Similarity=0.150  Sum_probs=178.5

Q ss_pred             CCChHHHHHHHHHccCCC--CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC
Q psy16707        143 KVPSSNLLTEAFKKDTNV--NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED  220 (420)
Q Consensus       143 ~~d~i~~l~~~~~~d~~~--~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~  220 (420)
                      ..|++..+...++++..+  +.|||++|.. ++.++.++++.+.++......+.....|.|..|.++||+++++++....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~   90 (401)
T TIGR01264        12 TVNPIRAIVDNMKVKPNPEKPMIKLSIGDP-TVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPD   90 (401)
T ss_pred             hhhHHHHHHHHHHhhhhcCCCeeecCCCCC-CCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcC
Confidence            467888888888887754  5599999984 2234567788888888776554334679999999999999999986533


Q ss_pred             CccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--
Q psy16707        221 CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--  298 (420)
Q Consensus       221 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--  298 (420)
                      . .+++++|                      +.|.|+++++.+++.++  +.| ||+|++++|+|++|..+++..|++  
T Consensus        91 ~-~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~v~i~~P~y~~~~~~~~~~g~~v~  144 (401)
T TIGR01264        91 G-PIEADDV----------------------VLCSGCSHAIEMCIAAL--ANA-GQNILVPRPGFPLYETLAESMGIEVK  144 (401)
T ss_pred             C-CCCHHHE----------------------EECcChHHHHHHHHHHh--CCC-CCEEEEeCCCChhHHHHHHHcCCEEE
Confidence            2 2455555                      56999999999998766  447 999999999999999999888764  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       145 ~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~  224 (401)
T TIGR01264       145 LYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLA  224 (401)
T ss_pred             EeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHH
Confidence                                                                                            


Q ss_pred             ------------------------------h-------hhhhh------ccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707        299 ------------------------------K-------ILIRA------FYSSPPIHGARIVQEILGDPKLKAQWLTEVK  335 (420)
Q Consensus       299 ------------------------------~-------~~~r~------~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~  335 (420)
                                                    .       .++..      ...+++...|.++..+|.+.     ..+.++
T Consensus       225 ~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-----~~~~l~  299 (401)
T TIGR01264       225 SLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT-----PQEYFD  299 (401)
T ss_pred             HcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC-----cHHHHH
Confidence                                          1       12111      13345667777777777531     135566


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------c
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------R  397 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------R  397 (420)
                      .++++++++|+.+.+.|+++  ++ |.+..+++|+|.|+.++          .+++++|++++||++.|+.        |
T Consensus       300 ~~~~~~~~~r~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iR  376 (401)
T TIGR01264       300 GTLSVLESNAMLCYGALAAV--PG-LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFR  376 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEE
Confidence            77799999999999999986  22 77778899999998642          4567888889999999862        9


Q ss_pred             EEEcccCCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl~~~ni~~la~AI~~vv  419 (420)
                      |+++. +.++++.-.+.|.+.+
T Consensus       377 is~~~-~~~~l~~~l~rl~~~~  397 (401)
T TIGR01264       377 VVLTV-PVVMMEEACSRIQEFC  397 (401)
T ss_pred             EEEcC-CHHHHHHHHHHHHHHH
Confidence            99984 5666666555555543

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.81  E-value=7.4e-18  Score=171.62  Aligned_cols=237  Identities=14%  Similarity=0.099  Sum_probs=160.2

Q ss_pred             ccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+..+....+.+..+.  ..+.++|||++|.   +  ..++++.++++......+.....|.+..|.++||+++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~   81 (388)
T PRK07366          7 LQPLQSNVFADMDRAKAQARAAGKELIDLSLGS---S--DLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWY   81 (388)
T ss_pred             hhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCC---C--CCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHH
Confidence            444555544444443332  2346789999996   3  34556777777776654444678999999999999999999


Q ss_pred             cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                      ....+..++++ .|                      +.|.|+++++.+++..+  +.| ||+|++++|+|+.|...++..
T Consensus        82 ~~~~g~~~~~~~~I----------------------~it~Gs~~al~~~~~~l--~~~-gd~Vlv~~P~y~~~~~~~~~~  136 (388)
T PRK07366         82 EQRFGLAVDPETEV----------------------LPLIGSQEGTAHLPLAV--LNP-GDFALLLDPGYPSHAGGVYLA  136 (388)
T ss_pred             HHhhCCcCCCcCeE----------------------EECCCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHhc
Confidence            65443334454 34                      56999999999988755  457 999999999999999999998


Q ss_pred             Ccc-----------------------------------------------------------------------------
Q psy16707        296 GLE-----------------------------------------------------------------------------  298 (420)
Q Consensus       296 G~~-----------------------------------------------------------------------------  298 (420)
                      |++                                                                             
T Consensus       137 g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~  216 (388)
T PRK07366        137 GGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV  216 (388)
T ss_pred             CCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence            875                                                                             


Q ss_pred             --------------------------------------h------hhhhhccC-CCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707        299 --------------------------------------K------ILIRAFYS-SPPIHGARIVQEILGDPKLKAQWLTE  333 (420)
Q Consensus       299 --------------------------------------~------~~~r~~~s-~pp~~ga~iv~~IL~dp~L~~~w~~e  333 (420)
                                                            .      ...+..++ +++...+..+...|.      ++.+.
T Consensus       217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~------~~~~~  290 (388)
T PRK07366        217 EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALT------GPQAT  290 (388)
T ss_pred             CCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHh------CcHHH
Confidence                                                  0      00011111 111111111222221      12356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------HHHHHHHHHhCCeEEeCC--------C--
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTKD--------G--  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------~~~v~~Ll~e~~Vy~~p~--------g--  396 (420)
                      ++.+++.++++|+.+.+.|++.|    |.+..+++|+|.|+.++       .++++.|++++||.+.|+        +  
T Consensus       291 l~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i  366 (388)
T PRK07366        291 VQQTVQIFRQRRDAFINALHQIG----WPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYV  366 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeE
Confidence            77888999999999999999886    66677889999997553       355688889999999985        1  


Q ss_pred             cEEEcccCCCCHHHHHHHHH
Q psy16707        397 RISMAGVTSKNVGYLAKAIH  416 (420)
Q Consensus       397 Ris~agl~~~ni~~la~AI~  416 (420)
                      ||++++ +.++++...+.|.
T Consensus       367 Ri~~~~-~~~~l~~~l~rl~  385 (388)
T PRK07366        367 RFALVH-DPDILEEAVERIA  385 (388)
T ss_pred             EEEecC-CHHHHHHHHHHHH
Confidence            999984 4444444444443

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.80  E-value=3.5e-18  Score=179.71  Aligned_cols=231  Identities=14%  Similarity=0.127  Sum_probs=163.0

Q ss_pred             CCCCceeecccccccCC----------------CCCCc-----------hHHHHHHHHHHHcc--CCCCCCCCCCCCHHH
Q psy16707        158 TNVNKINLGVGAYRDDQ----------------GKPYV-----------LPSVKQADEIVLNK--NLDKEYAPIIGAPDF  208 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~d----------------g~~~~-----------~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~f  208 (420)
                      +..++|+|++|.   ||                ..+|-           +..+.++...+...  .....|.+..|+++|
T Consensus        44 ~~~~vi~~~~G~---p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~L  120 (481)
T PTZ00377         44 PFDSIVYCNIGN---PQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFV  120 (481)
T ss_pred             CcceeEEcCCCC---hhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHH
Confidence            457999999996   75                32221           33444444444433  134679999999999


Q ss_pred             HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      |+++++++...++..+++++|                      +.|.|+++++.+++..+. ..| ||.|++|+|+|+.|
T Consensus       121 R~aia~~~~~~~g~~~~~~~I----------------------~it~Ga~~al~~~~~~l~-~~~-gD~Vlv~~P~y~~y  176 (481)
T PTZ00377        121 RKAVAAFIERRDGVPKDPSDI----------------------FLTDGASSGIKLLLQLLI-GDP-SDGVMIPIPQYPLY  176 (481)
T ss_pred             HHHHHHHHHHhcCCCCChhhE----------------------EEcCCHHHHHHHHHHHhc-cCC-CCEEEECCCCchhH
Confidence            999999986544434556666                      679999999999987652 147 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ..+++.+|++                                                                      
T Consensus       177 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~  256 (481)
T PTZ00377        177 SAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMA  256 (481)
T ss_pred             HHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEE
Confidence            9998887764                                                                      


Q ss_pred             ------------------h----h----------hh------------------------------------hhccCCCc
Q psy16707        299 ------------------K----I----------LI------------------------------------RAFYSSPP  310 (420)
Q Consensus       299 ------------------~----~----------~~------------------------------------r~~~s~pp  310 (420)
                                        .    .          ++                                    +....+++
T Consensus       257 De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~  336 (481)
T PTZ00377        257 DEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSN  336 (481)
T ss_pred             ehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCC
Confidence                              0    0          00                                    11122345


Q ss_pred             hHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC--CC-------
Q psy16707        311 IHGARIVQEILGDPK----LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG--LN-------  377 (420)
Q Consensus       311 ~~ga~iv~~IL~dp~----L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~--l~-------  377 (420)
                      ..+|.++..+|++++    ....|.++++.++.+|+++|+.+.+.|+++.  + |.+..+++|||.|..  ++       
T Consensus       337 ~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~--g-~~~~~p~gg~fl~~~~~l~~~~~~~~  413 (481)
T PTZ00377        337 VVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIE--G-VSCQPVEGAMYAFPRIELPEKAIQEA  413 (481)
T ss_pred             hHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--C-cEeecCCeeEEEEeeccCchhhHHHH
Confidence            556666666665432    2345778888888899999999999998862  2 677788899999943  22       


Q ss_pred             --------HHHHHHHHHhCCeEEeCCC-----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        378 --------ATQVEKLIKEHSVYLTKDG-----------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 --------~~~v~~Ll~e~~Vy~~p~g-----------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                              .+++..+++++||.++||.           |||++ .+++.++...+.|.+.+
T Consensus       414 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~  473 (481)
T PTZ00377        414 KERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFH  473 (481)
T ss_pred             HhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHH
Confidence                    2356788899999999851           99998 66667666666666543

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.80  E-value=1.3e-17  Score=168.65  Aligned_cols=236  Identities=17%  Similarity=0.158  Sum_probs=172.4

Q ss_pred             ccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC
Q psy16707        141 SVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED  220 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~  220 (420)
                      .+....+..+......  .+++|+|++|.   ++  .++++.+.++......+ ....|.+..|.++||+++++++....
T Consensus         7 ~~~~~~~~~~~~~~~~--~~~~i~l~~g~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~la~~~~~~~   78 (382)
T PRK06108          7 ALPESGIREVANAGRG--REGVLPLWFGE---SD--LPTPDFIRDAAAAALAD-GETFYTHNLGIPELREALARYVSRLH   78 (382)
T ss_pred             hCCchHHHHHHHHHhc--cCCeEEecCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            3444455555544432  35789999996   43  46678888887776654 34569999999999999999984332


Q ss_pred             CccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--
Q psy16707        221 CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--  298 (420)
Q Consensus       221 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--  298 (420)
                      +..+++++|                      +.|.||++++.+++..+  +.| ||+|++++|+|++|...++..|++  
T Consensus        79 ~~~~~~~~i----------------------~~t~g~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~  133 (382)
T PRK06108         79 GVATPPERI----------------------AVTSSGVQALMLAAQAL--VGP-GDEVVAVTPLWPNLVAAPKILGARVV  133 (382)
T ss_pred             CCCcCcceE----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEeCCCccchHHHHHHCCCEEE
Confidence            222455655                      56999999999988755  447 999999999999999988887654  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       134 ~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~  213 (382)
T PRK06108        134 CVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPS  213 (382)
T ss_pred             EeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCC
Confidence                                                                                            


Q ss_pred             -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707        299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM  337 (420)
Q Consensus       299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m  337 (420)
                                                               .........++|...|.++..+|.+.      .+.++.+
T Consensus       214 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~  287 (382)
T PRK06108        214 FLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG------EDFVAEL  287 (382)
T ss_pred             HhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC------hHHHHHH
Confidence                                                     11112234556777777777767542      2445667


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C--cEEEcc
Q psy16707        338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G--RISMAG  402 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g--Ris~ag  402 (420)
                      +++++++|+.+.+.|+++.  + |....+++|||.|+.++     .+++++|++++||++.|+        +  |||++.
T Consensus       288 ~~~~~~~~~~l~~~L~~~~--~-~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~  364 (382)
T PRK06108        288 VARLRRSRDHLVDALRALP--G-VEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR  364 (382)
T ss_pred             HHHHHHHHHHHHHHHHhCC--C-CcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence            7999999999999998762  1 77778889999997553     467788889999999874        1  999997


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                       +++.++...+.|++++
T Consensus       365 -~~~~l~~~l~~l~~~l  380 (382)
T PRK06108        365 -DPARLDEAVERLRRFL  380 (382)
T ss_pred             -CHHHHHHHHHHHHHHH
Confidence             7777777777777654

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.79  E-value=1.5e-17  Score=172.83  Aligned_cols=219  Identities=16%  Similarity=0.131  Sum_probs=160.6

Q ss_pred             CCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        159 NVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       159 ~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      ..++|+|++|.   |+  +.+++++.+.++............|.|..|+++||+++++++....+..+++++|       
T Consensus        51 ~~~~i~l~~G~---P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v-------  120 (430)
T PLN00145         51 PRPVLPLGHGD---PSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDI-------  120 (430)
T ss_pred             CCCeeeCCCCC---CCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhE-------
Confidence            56899999994   65  3356677787777776644345689999999999999999986554444555555       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|+++|+.+++..+.  .| ||+|++|+|+|++|...+...|++                  
T Consensus       121 ---------------~it~G~~~al~l~~~~l~--~~-Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~  182 (430)
T PLN00145        121 ---------------YLTAGCAQAIEIIMSVLA--QP-GANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEG  182 (430)
T ss_pred             ---------------EEeCCHHHHHHHHHHHhc--CC-CCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHH
Confidence                           679999999999988764  47 999999999999999888877664                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       183 l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK  262 (430)
T PLN00145        183 VEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISK  262 (430)
T ss_pred             HHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecccc
Confidence                                                                                            


Q ss_pred             -----------------hh----------h--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 -----------------KI----------L--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLK  349 (420)
Q Consensus       299 -----------------~~----------~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~  349 (420)
                                       ..          +  ....+.+++...|.++..+|.+.     ..+.++.++++++++|+.++
T Consensus       263 ~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~  337 (430)
T PLN00145        263 RWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANT-----KEEFFTKTLGLLKETADICY  337 (430)
T ss_pred             ccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHH
Confidence                             00          0  01123345677777777777531     13556777799999999999


Q ss_pred             HHHHhcCCCCCCcc-cCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHH
Q psy16707        350 DNLQKEGSNKPWNH-ITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGY  410 (420)
Q Consensus       350 ~~L~~~g~~~~w~~-i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~  410 (420)
                      +.|++..  + +.. ..+++|||.|+.++          .+++++|++++||.+.||.        ||+++ .+   .+.
T Consensus       338 ~~L~~~~--g-~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~-~~---~~~  410 (430)
T PLN00145        338 EKIKEIK--C-ITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA-ID---PPS  410 (430)
T ss_pred             HHHhcCC--C-CCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC-CC---HHH
Confidence            9998762  1 343 36789999997543          3578899999999999972        99998 34   455


Q ss_pred             HHHHHHH
Q psy16707        411 LAKAIHA  417 (420)
Q Consensus       411 la~AI~~  417 (420)
                      +.+++.+
T Consensus       411 l~~al~r  417 (430)
T PLN00145        411 LEDGLER  417 (430)
T ss_pred             HHHHHHH
Confidence            5555443

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.79  E-value=1.6e-17  Score=171.13  Aligned_cols=238  Identities=18%  Similarity=0.132  Sum_probs=168.0

Q ss_pred             CChHHHHHHHHHccCCCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCC
Q psy16707        144 VPSSNLLTEAFKKDTNVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDC  221 (420)
Q Consensus       144 ~d~i~~l~~~~~~d~~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~  221 (420)
                      .+++..+.+.+.+|.++++|+|++|.   +|  +.+++++.+.++.....++.....|.|..|.++||+++++++...++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~i~l~~G~---p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g   92 (409)
T PLN00143         16 DDAVKFLKENFNEDDHRLAISFGFGD---PSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLP   92 (409)
T ss_pred             HHHHHHHHHhcccCCCCceeeCCCCC---CCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence            44566666667789999999999996   54  55788999988877766544456799999999999999999966544


Q ss_pred             ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---
Q psy16707        222 PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---  298 (420)
Q Consensus       222 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---  298 (420)
                      ..+++++|                      +.|.|+++++.+++..+  +.| ||.|++++|+|++|...++..|.+   
T Consensus        93 ~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~v~v~~P~y~~~~~~~~~~g~~~~~  147 (409)
T PLN00143         93 YQLSPDDV----------------------YLTLGCKHAAEIIIKVL--ARP-EANILLPRPGFPDVETYAIFHHLEIRH  147 (409)
T ss_pred             CCCCHhhE----------------------EEecChHHHHHHHHHHH--cCC-CCEEEEcCCCCcCHHHHHHHcCCEEEE
Confidence            34556666                      56999999999998765  457 999999999999999988887764   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       148 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~  227 (409)
T PLN00143        148 FDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGL  227 (409)
T ss_pred             EeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhh
Confidence                                                                                            


Q ss_pred             ----------------------------h----------hhh------hhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 ----------------------------K----------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 ----------------------------~----------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                  .          .++      +....+++...|.++..+|.+.  ..+|   +
T Consensus       228 ~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~---~  302 (409)
T PLN00143        228 FASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKT--TEDF---F  302 (409)
T ss_pred             hcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcC--hHHH---H
Confidence                                        0          001      1112223455666666666431  1234   3


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------  396 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------  396 (420)
                      ++++++++++|+.+.+.|++++.  .+....+++|+|.|+.++          .+++..|++++||.+.||.        
T Consensus       303 ~~~~~~~~~~~~~~~~~L~~~~~--~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~i  380 (409)
T PLN00143        303 SKTINILRAALAFCYDKLKEIPC--IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWL  380 (409)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeE
Confidence            44457888888889999887642  111235678999997653          3566788899999999962        


Q ss_pred             cEEEcccCCCCHHHHHHHHHH
Q psy16707        397 RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       397 Ris~agl~~~ni~~la~AI~~  417 (420)
                      |||++ .+.+.++.-.+.|.+
T Consensus       381 Ri~~~-~~~~~l~~al~rl~~  400 (409)
T PLN00143        381 RITFA-VEQSSLEDGLGRLKS  400 (409)
T ss_pred             EEEEc-CCHHHHHHHHHHHHH
Confidence            99998 455444444444443

>PRK09148 aminotransferase; Validated

Probab=99.79  E-value=2.4e-17  Score=169.48  Aligned_cols=236  Identities=14%  Similarity=0.171  Sum_probs=165.6

Q ss_pred             ccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+..+++..+.+..++  ..+++.|||+.|.   ++  +++++.+.++............|.|..|.++||+++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~   81 (405)
T PRK09148          7 IRRLPPYVFEQVNRLKAAARAAGADIIDLGMGN---PD--LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYY   81 (405)
T ss_pred             hhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCC---CC--CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHH
Confidence            445556666666555432  2356789999995   43  3446666666665544344679999999999999999998


Q ss_pred             cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                      ....+..++++ +|                      +.|.|+++++.+++..+  +.| ||+|++++|+|+.|...++..
T Consensus        82 ~~~~g~~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~Vl~~~P~y~~~~~~~~~~  136 (405)
T PRK09148         82 ARRFGVKLNPDTQV----------------------VATLGSKEGFANMAQAI--TAP-GDVILCPNPSYPIHAFGFIMA  136 (405)
T ss_pred             HHHhCCCCCCCCcE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEcCCCCcccHHHHHhc
Confidence            42211123443 45                      67999999999998766  457 999999999999999998888


Q ss_pred             Ccc-----------------------------------------------------------------------------
Q psy16707        296 GLE-----------------------------------------------------------------------------  298 (420)
Q Consensus       296 G~~-----------------------------------------------------------------------------  298 (420)
                      |++                                                                             
T Consensus       137 g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~  216 (405)
T PRK09148        137 GGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP  216 (405)
T ss_pred             CCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence            875                                                                             


Q ss_pred             -----------------------------------------h--hhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 -----------------------------------------K--ILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 -----------------------------------------~--~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                               .  ...+. ...+++...|.++..+|+++      .+.+
T Consensus       217 ~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~------~~~~  290 (405)
T PRK09148        217 PPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGP------QDCI  290 (405)
T ss_pred             CCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc------HHHH
Confidence                                                     1  11122 12344667788787778653      2455


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--------HHHHHHHHHhCCeEEeCC--------C--
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------ATQVEKLIKEHSVYLTKD--------G--  396 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------~~~v~~Ll~e~~Vy~~p~--------g--  396 (420)
                      +.++..++++|+.+.+.|++.|    |.+..++.|+|.|+.++        .++.+.|+++.||.+.|+        +  
T Consensus       291 ~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~  366 (405)
T PRK09148        291 AEMRELYKKRRDVLVESFGRAG----WDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYV  366 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence            6667899999999999999876    55567889999997653        355678888999999985        1  


Q ss_pred             cEEEcccCCCCHHHHHHHH
Q psy16707        397 RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       397 Ris~agl~~~ni~~la~AI  415 (420)
                      ||+++ .+.+.+....+.|
T Consensus       367 Ri~~~-~~~~~l~~al~~l  384 (405)
T PRK09148        367 RIALV-ENEQRIRQAARNI  384 (405)
T ss_pred             EEEec-CCHHHHHHHHHHH
Confidence            99987 4444433333333

>PRK06855 aminotransferase; Validated

Probab=99.78  E-value=1.6e-17  Score=172.53  Aligned_cols=226  Identities=12%  Similarity=0.115  Sum_probs=164.7

Q ss_pred             CCCCceeecccccccCCC-CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        158 TNVNKINLGVGAYRDDQG-KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg-~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      .+.+++++++|.   |++ +..+++.++++...+..+.....|.|..|.++||+++++++-..++..+++++|       
T Consensus        30 ~g~~~~~~~~G~---p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I-------   99 (433)
T PRK06855         30 LGVKITWENIGD---PIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDI-------   99 (433)
T ss_pred             ccccccccccCC---CcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHE-------
Confidence            345789999995   643 467888888887776544455789999999999999999995443333556665       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH-hhcCcc-----------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC-KHTGLE-----------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~-~~aG~~-----------------  298 (420)
                                     +.|.|++.++.+++. +  +.| ||.|++++|+|+.|.... ..+|++                 
T Consensus       100 ---------------~it~G~~~al~~~~~-l--~~~-Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~  160 (433)
T PRK06855        100 ---------------IFFNGLGDAIAKIYG-L--LRR-EARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLD  160 (433)
T ss_pred             ---------------EEcCcHHHHHHHHHH-h--cCC-CCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHH
Confidence                           569999999998875 3  457 999999999999997542 233331                 


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       161 ~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S  240 (433)
T PRK06855        161 DLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKG  240 (433)
T ss_pred             HHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEec
Confidence                                                                                            


Q ss_pred             ---------------h-----------hhhh------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ---------------K-----------ILIR------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ  346 (420)
Q Consensus       299 ---------------~-----------~~~r------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~  346 (420)
                                     .           .+.+      ....+++...|.++...|.++    +|.+.+++++..|+++|+
T Consensus       241 ~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~  316 (433)
T PRK06855        241 ISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHP----EYKNYLKERNKRYEKRSN  316 (433)
T ss_pred             CccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCC----cHHHHHHHHHHHHHHHHH
Confidence                           0           0000      012356677777777777653    455677788899999999


Q ss_pred             HHHHHHHhcCCCCCCcccCCCCceEEecCCC--------------------------------HHHHHHHHHhCCeEEeC
Q psy16707        347 SLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------------------------------ATQVEKLIKEHSVYLTK  394 (420)
Q Consensus       347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------------------------------~~~v~~Ll~e~~Vy~~p  394 (420)
                      .+.+.|++.  ++ |....+++|||.|+.++                                .+++..|++++||.++|
T Consensus       317 ~~~~~L~~~--~~-~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~P  393 (433)
T PRK06855        317 IAYEKLKDV--PG-LKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVP  393 (433)
T ss_pred             HHHHHHhcC--CC-eeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEec
Confidence            999999875  22 66677888999997554                                35567888999999999


Q ss_pred             CC---------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        395 DG---------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 ~g---------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |.         |||+|+.+.+.++.-.+.|.+++
T Consensus       394 G~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~  427 (433)
T PRK06855        394 LSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKI  427 (433)
T ss_pred             CCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHH
Confidence            71         99999877777766666666543

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.78  E-value=3.7e-17  Score=167.44  Aligned_cols=241  Identities=15%  Similarity=0.153  Sum_probs=172.2

Q ss_pred             chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      ++++ ...+.++.+..+.....+.  ..++.|||++|.   ++  ..+++.++++......+...+.|. ..|.++||++
T Consensus         5 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~a   77 (399)
T PRK07681          5 LATR-MKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGN---PD--MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEA   77 (399)
T ss_pred             HhHH-HhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHH
Confidence            4444 4555556666665554322  356889999996   43  356778888877766443445665 4899999999


Q ss_pred             HHHHHcCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        212 AAQLAYGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      +++++...++..+++ ++|                      +.|.|++.++.+++..+  +.| ||.|++++|+|+.|..
T Consensus        78 ia~~~~~~~g~~~~~~~~I----------------------~it~G~~~al~~~~~~~--~~~-Gd~Vlv~~P~y~~~~~  132 (399)
T PRK07681         78 VTEYYNNTHNVILNADKEV----------------------LLLMGSQDGLVHLPMVY--ANP-GDIILVPDPGYTAYET  132 (399)
T ss_pred             HHHHHHHHhCCCCCCCCeE----------------------EECCCcHHHHHHHHHHh--CCC-CCEEEECCCCccchHH
Confidence            999985443333444 455                      56999999999988755  457 9999999999999999


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      +++..|++                                                                        
T Consensus       133 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~  212 (399)
T PRK07681        133 GIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFY  212 (399)
T ss_pred             HHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhe
Confidence            99988875                                                                        


Q ss_pred             ----------------------------------------------hhh---hhhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707        299 ----------------------------------------------KIL---IRAFYSSPPIHGARIVQEILGDPKLKAQ  329 (420)
Q Consensus       299 ----------------------------------------------~~~---~r~~~s~pp~~ga~iv~~IL~dp~L~~~  329 (420)
                                                                    ..+   ....-.+++...|.++..+|.+.   ..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~  289 (399)
T PRK07681        213 FDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG---AA  289 (399)
T ss_pred             eCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HH
Confidence                                                          111   12122345667777777777653   13


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G  396 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g  396 (420)
                      |   ++.++.+++++|+.+.+.|++.|    |....+++|+|.|+.++     .++++.|++++||++.|+        +
T Consensus       290 ~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~  362 (399)
T PRK07681        290 F---CEKNRGIYQERRDTLVDGFRTFG----WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEG  362 (399)
T ss_pred             H---HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCC
Confidence            4   45556889999999999999876    66567789999997543     366788888899999885        2


Q ss_pred             --cEEEcccCCCCHHHHHHHHHH
Q psy16707        397 --RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       397 --Ris~agl~~~ni~~la~AI~~  417 (420)
                        ||+++ .+.+.++...+.|.+
T Consensus       363 ~iRis~~-~~~~~~~~~l~~l~~  384 (399)
T PRK07681        363 FVRIALV-QDEEVLQQAVENIRN  384 (399)
T ss_pred             eEEEEec-CCHHHHHHHHHHHHH
Confidence              99998 456777777777765

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.78  E-value=4.8e-17  Score=165.27  Aligned_cols=235  Identities=17%  Similarity=0.154  Sum_probs=164.8

Q ss_pred             ccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      ...+..+.+..+.+.+.  ++.+++++||++|.   ++  +.+++.+.++..........+.|.+..|.++||+++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~   80 (383)
T TIGR03540         6 IENLPPYLFAEIDKKKAEKKAEGVDVISLGIGD---PD--LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWY   80 (383)
T ss_pred             hccCChhHHHHHHHHHHHHHhcCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            33334444445555553  33567899999995   43  3457778877776554334578999999999999999998


Q ss_pred             cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                      ...++..++++ .|                      +.|.|+++++.+++..+  +.| ||.|++++|+|++|...++..
T Consensus        81 ~~~~~~~~~~~~~v----------------------i~t~G~~~~l~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~  135 (383)
T TIGR03540        81 KRRFGVELDPETEV----------------------LSLIGSKEGIAHIPLAF--VNP-GDIVLVPDPGYPVYRIGTLFA  135 (383)
T ss_pred             HHhhCCCCCCCCeE----------------------EECCCcHHHHHHHHHHh--CCC-CCEEEEeCCCCcchHHHHHhc
Confidence            53322222333 33                      56899999999988755  457 999999999999999999888


Q ss_pred             Ccc-----------------------------------------------------------------------------
Q psy16707        296 GLE-----------------------------------------------------------------------------  298 (420)
Q Consensus       296 G~~-----------------------------------------------------------------------------  298 (420)
                      |++                                                                             
T Consensus       136 G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~  215 (383)
T TIGR03540       136 GGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK  215 (383)
T ss_pred             CCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence            765                                                                             


Q ss_pred             -----------------------------------------hhh--hhhc-cCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 -----------------------------------------KIL--IRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 -----------------------------------------~~~--~r~~-~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                               ..+  .+.. .++++...+.++..+|.+.   .+|   +
T Consensus       216 ~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~---~  289 (383)
T TIGR03540       216 APSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDV---V  289 (383)
T ss_pred             CcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHH---H
Confidence                                                     111  1222 2344555666666667653   344   4


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C--cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G--RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g--Ris  399 (420)
                      +.++++++++|+.+.+.|++.|    |....+++|+|.|+.++     .+++++|++++||.+.|+        +  |||
T Consensus       290 ~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris  365 (383)
T TIGR03540       290 KEIRKIYQRRRDLLLEALKKIG----IDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRIS  365 (383)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC----CEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEE
Confidence            5556899999999999999886    66677788999997553     456788888999999985        2  999


Q ss_pred             EcccCCCCHHHHHHHHHH
Q psy16707        400 MAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       400 ~agl~~~ni~~la~AI~~  417 (420)
                      ++ .+.   +.+.+++..
T Consensus       366 ~~-~~~---~~l~~~l~~  379 (383)
T TIGR03540       366 LT-VPD---ERLEEAVAR  379 (383)
T ss_pred             ec-CCH---HHHHHHHHH
Confidence            96 443   566666554

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK08960 hypothetical protein; Provisional

Probab=99.78  E-value=3.7e-17  Score=166.58  Aligned_cols=236  Identities=14%  Similarity=0.179  Sum_probs=169.6

Q ss_pred             ccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+...++..+++..++.  ..+++|+|+.|.   +  .+++++.|.++......+ ....|.|..|.+++|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~--~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~   82 (387)
T PRK08960          9 SRDIEPFHVMALLARANELEAAGHDVIHLEIGE---P--DFTTAEPIVAAGQAALAA-GHTRYTAARGLPALREAIAGFY   82 (387)
T ss_pred             HHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCC---C--CCCCCHHHHHHHHHHHhc-CCCccCCCCCCHHHHHHHHHHH
Confidence            5556666777766655432  346789999997   3  245678888887776643 3467999999999999999998


Q ss_pred             cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      ....+..+++++|                      +.|.|+++++.+++..+  +.| ||+|++++|+|++|...++..|
T Consensus        83 ~~~~g~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g  137 (387)
T PRK08960         83 AQRYGVDVDPERI----------------------LVTPGGSGALLLASSLL--VDP-GKHWLLADPGYPCNRHFLRLVE  137 (387)
T ss_pred             HHHhCCCCChhhE----------------------EEccCcHHHHHHHHHHh--cCC-CCEEEEcCCCCcchHHHHHhcC
Confidence            4322222455655                      56999999999988755  457 9999999999999999988877


Q ss_pred             cc------------------------------------------------------------------------------
Q psy16707        297 LE------------------------------------------------------------------------------  298 (420)
Q Consensus       297 ~~------------------------------------------------------------------------------  298 (420)
                      .+                                                                              
T Consensus       138 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~  217 (387)
T PRK08960        138 GAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA  217 (387)
T ss_pred             CeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence            64                                                                              


Q ss_pred             ---------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16707        299 ---------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMAD  339 (420)
Q Consensus       299 ---------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~  339 (420)
                                                             ..+......+++...|.++..+|.+     ++.+.++.++.
T Consensus       218 ~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-----~~~~~l~~~~~  292 (387)
T PRK08960        218 SVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-----ETLAILEARRA  292 (387)
T ss_pred             ChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-----CcHHHHHHHHH
Confidence                                                   1111222345577788777766653     23456677779


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecCC-----C-HHHHHHHHHhCCeEEeCC---------C--cEEEc
Q psy16707        340 RIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGL-----N-ATQVEKLIKEHSVYLTKD---------G--RISMA  401 (420)
Q Consensus       340 r~~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~l-----~-~~~v~~Ll~e~~Vy~~p~---------g--Ris~a  401 (420)
                      .|+++|+.+.+.|++.|    |.. ..+++|+|.|+.+     + .++++.|++++||++.||         +  ||+++
T Consensus       293 ~~~~~~~~l~~~L~~~~----~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~  368 (387)
T PRK08960        293 EFARRRDFLLPALRELG----FGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT  368 (387)
T ss_pred             HHHHHHHHHHHHHHhcC----CcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec
Confidence            99999999999999876    443 3567889999644     3 346678888999999985         1  99998


Q ss_pred             ccCCCCHHHHHHHHHHH
Q psy16707        402 GVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       402 gl~~~ni~~la~AI~~v  418 (420)
                      . +   .+.+.+++.++
T Consensus       369 ~-~---~~~l~~al~~l  381 (387)
T PRK08960        369 Q-S---LPRLQEAVERI  381 (387)
T ss_pred             C-C---HHHHHHHHHHH
Confidence            4 3   46666666553

>PLN02656 tyrosine transaminase

Probab=99.78  E-value=4.6e-17  Score=167.61  Aligned_cols=235  Identities=19%  Similarity=0.153  Sum_probs=166.4

Q ss_pred             hHHHHHHHH-HccCCCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCc
Q psy16707        146 SSNLLTEAF-KKDTNVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCP  222 (420)
Q Consensus       146 ~i~~l~~~~-~~d~~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~  222 (420)
                      +.+.+.+.. .+..+.++|||++|.   |+  ..+++++.++++...+..++....|.|..|.++||+++++++....+.
T Consensus        16 ~~~~~~~~~~~~~~~~~~i~l~~G~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~   92 (409)
T PLN02656         16 ILSLLMESIDDEENGKRVISLGMGD---PTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY   92 (409)
T ss_pred             HHHHHHHhccccccCCeeeecCCCC---CCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence            344444343 334467999999995   65  336778888888877665445679999999999999999998654333


Q ss_pred             cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----
Q psy16707        223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----  298 (420)
Q Consensus       223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----  298 (420)
                      .+++++|                      +.|.|+++++.+++..+  +.| ||+|++|+|+|+.|....+..|++    
T Consensus        93 ~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~i  147 (409)
T PLN02656         93 KLSLDDV----------------------FITSGCTQAIDVALSML--ARP-GANILLPRPGFPIYELCAAFRHLEVRYV  147 (409)
T ss_pred             CCCcccE----------------------EEeCChHHHHHHHHHHH--hCC-CCeEEEeCCCCCcHHHHHHHcCCEEEEE
Confidence            3455555                      66999999999988765  457 999999999999998888776654    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       148 ~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~  227 (409)
T PLN02656        148 DLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF  227 (409)
T ss_pred             eCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh
Confidence                                                                                            


Q ss_pred             ---------------------------h----------hhh------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707        299 ---------------------------K----------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK  335 (420)
Q Consensus       299 ---------------------------~----------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~  335 (420)
                                                 .          .++      +..+.+++...|.++..+|++.     ..+.++
T Consensus       228 ~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~~~  302 (409)
T PLN02656        228 GSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQT-----DESFFK  302 (409)
T ss_pred             cccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcC-----cHHHHH
Confidence                                       1          111      1224456777888887777531     124466


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCC---------H-HHHHHHHHhCCeEEeCCC--------
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN---------A-TQVEKLIKEHSVYLTKDG--------  396 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~---------~-~~v~~Ll~e~~Vy~~p~g--------  396 (420)
                      .++.+++++|+.+.+.|++++.   +. ...+++|||.|+.++         . +++..++++.||.+.||.        
T Consensus       303 ~~~~~~~~~r~~~~~~L~~~~~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~i  379 (409)
T PLN02656        303 KTINILKQSSDICCDRIKEIPC---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWL  379 (409)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCC---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeE
Confidence            6678999999999999988642   22 246788999996542         3 567788899999999972        


Q ss_pred             cEEEcccCCCCHHHHHHHHHH
Q psy16707        397 RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       397 Ris~agl~~~ni~~la~AI~~  417 (420)
                      ||+++. +++.++.-.+.|.+
T Consensus       380 Ri~~~~-~~e~l~eal~rl~~  399 (409)
T PLN02656        380 RITFAA-DPSSLEEALGRIKS  399 (409)
T ss_pred             EEEeCC-CHHHHHHHHHHHHH
Confidence            999994 54444444443333

>PRK07550 hypothetical protein; Provisional

Probab=99.78  E-value=5.9e-17  Score=164.91  Aligned_cols=237  Identities=15%  Similarity=0.148  Sum_probs=172.5

Q ss_pred             ccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        141 SVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      .+.+.+++.+.+.+.+  +.+.+.|||+.|.   ++  .++++.+.++...+..+.....|.|..|.++||+++++++..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~   82 (386)
T PRK07550          8 ALFPPPIPEVRAWLAGYDGADGPLIDLSQAV---PG--YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR   82 (386)
T ss_pred             hcCChHHHHHHHHHHHHhhcCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence            3344456666555432  3456789999996   33  345677777777665433456899999999999999999864


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .++..+.+++|                      +.|.|+++++.+++..+  +.| ||+|++++|+|++|..+++..|++
T Consensus        83 ~~g~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~  137 (386)
T PRK07550         83 LYGAAISPEQV----------------------HITSGCNQAFWAAMVTL--AGA-GDEVILPLPWYFNHKMWLDMLGIR  137 (386)
T ss_pred             HhCCCCCcceE----------------------EEecCcHHHHHHHHHHh--cCC-CCEEEEcCCCCcchHHHHHhcCCE
Confidence            44433555655                      56999999999998766  457 999999999999999998888775


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       138 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~  217 (386)
T PRK07550        138 PVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHD  217 (386)
T ss_pred             EEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcc
Confidence                                                                                            


Q ss_pred             -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707        299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM  337 (420)
Q Consensus       299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m  337 (420)
                                                               .........++|..+|.++..+|++      +.+.++.+
T Consensus       218 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~------~~~~~~~~  291 (386)
T PRK07550        218 LFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN------LADWRAGN  291 (386)
T ss_pred             hhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc------HHHHHHHH
Confidence                                                     1222334456788888888877754      23445556


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----C-HHHHHHHHHhCCeEEeCC--------C--cEEEc
Q psy16707        338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----N-ATQVEKLIKEHSVYLTKD--------G--RISMA  401 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~-~~~v~~Ll~e~~Vy~~p~--------g--Ris~a  401 (420)
                      +++++++|+.+.+.|++..   .|. +.+++|+|.|+.+     + .+++++|++++||.+.|+        +  ||+++
T Consensus       292 ~~~~~~~~~~l~~~L~~~~---~~~-~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~  367 (386)
T PRK07550        292 RAEIARRRDAFRAVFARLP---GWE-LLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA  367 (386)
T ss_pred             HHHHHHHHHHHHHHHHhCC---Cce-eCCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee
Confidence            6899999999999998862   154 3467889999633     3 356688888999999984        1  99999


Q ss_pred             ccCCCCHHHHHHHHHH
Q psy16707        402 GVTSKNVGYLAKAIHA  417 (420)
Q Consensus       402 gl~~~ni~~la~AI~~  417 (420)
                      ..++++++...+.|.+
T Consensus       368 ~~~~~~~~~~~~~l~~  383 (386)
T PRK07550        368 NADVAGIGELVERLRA  383 (386)
T ss_pred             cCCHHHHHHHHHHHHh
Confidence            8787777777777665

>PRK07337 aminotransferase; Validated

Probab=99.77  E-value=4.5e-17  Score=165.90  Aligned_cols=239  Identities=12%  Similarity=0.156  Sum_probs=166.8

Q ss_pred             chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      |+++ +..+..+.+..+.+...+  ..+++.|+|++|.   ++  +++++.+.++......+ ....|.+..|.++||++
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~   75 (388)
T PRK07337          3 LAAR-VDAIEPFYVMELAKEAQALERAGRDIIHMGIGE---PD--FTAPEPVVEAAARALRR-GVTQYTSALGLAPLREA   75 (388)
T ss_pred             hhhH-hHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence            4444 555555655555544432  2457889999996   43  44567777777665543 45789999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+..+++++|                      +.|.|++.|+.+++..+  +.| ||+|++++|+|++|...
T Consensus        76 ia~~~~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~  130 (388)
T PRK07337         76 IAAWYARRFGLDVAPERI----------------------VVTAGASAALLLACLAL--VER-GDEVLMPDPSYPCNRHF  130 (388)
T ss_pred             HHHHHHHHhCCCCChHhE----------------------EEecCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHH
Confidence            999984433333455655                      56999999999988755  457 99999999999999988


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       131 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~  210 (388)
T PRK07337        131 VAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSY  210 (388)
T ss_pred             HHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccccccc
Confidence            8877653                                                                         


Q ss_pred             --------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 --------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 --------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                                  .........+++..+|.++..++.+..     .+.+
T Consensus       211 ~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-----~~~~  285 (388)
T PRK07337        211 DAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDT-----LAIY  285 (388)
T ss_pred             CCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc-----hHHH
Confidence                                                        111123334567778877777665421     2334


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecCC---------CH-HHHHHHHHhCCeEEeCC--------
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGL---------NA-TQVEKLIKEHSVYLTKD--------  395 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~l---------~~-~~v~~Ll~e~~Vy~~p~--------  395 (420)
                      ++++..|+++|+.+.+.|++.|    +.. ..+++|+|.|+.+         ++ +++++|++++||.+.||        
T Consensus       286 ~~~~~~~~~~r~~~~~~L~~~~----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~  361 (388)
T PRK07337        286 ERRRAEFKRRRDFIVPALESLG----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAP  361 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence            5667899999999999999876    332 3567899999754         33 45678889999999874        


Q ss_pred             -C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        396 -G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       396 -g--Ris~agl~~~ni~~la~AI~~  417 (420)
                       +  ||+++. +   .+.+.++|++
T Consensus       362 ~~~~Ri~~~~-~---~~~l~~~l~r  382 (388)
T PRK07337        362 RDYIRLSYAT-S---MSRLEEAVAR  382 (388)
T ss_pred             CCEEEEEecC-C---HHHHHHHHHH
Confidence             1  999984 4   4555555544

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.77  E-value=4.2e-17  Score=173.09  Aligned_cols=246  Identities=12%  Similarity=0.124  Sum_probs=170.2

Q ss_pred             ccchhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCC-CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707        132 IRFQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQG-KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF  208 (420)
Q Consensus       132 ~~~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg-~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f  208 (420)
                      |..|++ +..+..+.+..+.+.++..  .+.++|+|++|.   |+. .+++++.+.++......  ..+.|++..|+++|
T Consensus       117 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~---p~~~~~~~p~~~~~~~~~~~~--~~~~Y~~~~G~~~l  190 (517)
T PRK13355        117 FKKSHK-LDNVLYDVRGPVVDEANRMEAAGTHILKLNIGN---PAPFGFRTPDEVVYDMAQQLT--DTEGYSDSKGLFSA  190 (517)
T ss_pred             CChhHH-hhccCccHHHHHHHHHHHHHHcCCCeEEecCcC---CCcCCCCCCHHHHHHHHHHhh--cCCCCCCCcChHHH
Confidence            345666 7777777666555554432  357899999996   542 14566666666655443  35689999999999


Q ss_pred             HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      |+++++++.......+++++|                      +.|.|+++++.+++..+  +.| ||+|++|+|+|+.|
T Consensus       191 Reaia~~~~~~~~~~~~~~~I----------------------~it~G~~eal~~~~~~l--~~~-Gd~Vli~~P~y~~y  245 (517)
T PRK13355        191 RKAIMQYAQLKGLPNVDVDDI----------------------YTGNGVSELINLSMSAL--LDD-GDEVLIPSPDYPLW  245 (517)
T ss_pred             HHHHHHHHHhcCCCCCChhHE----------------------EEeCcHHHHHHHHHHHh--CCC-CCEEEEcCCCCcCH
Confidence            999999985444333455555                      66999999999988755  458 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++.+|++                                                                      
T Consensus       246 ~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~  325 (517)
T PRK13355        246 TACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDR  325 (517)
T ss_pred             HHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhh
Confidence            9999988875                                                                      


Q ss_pred             ------------------------------------------h-------hh------hhhccCCCchHHHHHHHHHhCC
Q psy16707        299 ------------------------------------------K-------IL------IRAFYSSPPIHGARIVQEILGD  323 (420)
Q Consensus       299 ------------------------------------------~-------~~------~r~~~s~pp~~ga~iv~~IL~d  323 (420)
                                                                .       .+      ......+++..+|.++..+|.+
T Consensus       326 ~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~  405 (517)
T PRK13355        326 LVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGG  405 (517)
T ss_pred             hcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcC
Confidence                                                      0       00      1112245567778777777765


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCC---------CHHHHHHHHHhCCeEEe
Q psy16707        324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGL---------NATQVEKLIKEHSVYLT  393 (420)
Q Consensus       324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l---------~~~~v~~Ll~e~~Vy~~  393 (420)
                      ...   +.+.++.+ .++.++|+.+.+.|+++ |    +....+++|||.|..+         +.+++..|++++||.+.
T Consensus       406 ~~~---~~~~~~~~-~~~~~~r~~l~~~L~~~~g----~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~  477 (517)
T PRK13355        406 HQS---VKDYLVPG-GRVYEQRELVYNALNAIPG----ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIV  477 (517)
T ss_pred             Ccc---HHHHHHHH-HHHHHHHHHHHHHHhcCCC----cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEe
Confidence            322   22333333 34556789999999887 4    6677888899998544         24677888899999999


Q ss_pred             CC------C----cEEEcccCCCCHHHHHHHHHH
Q psy16707        394 KD------G----RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       394 p~------g----Ris~agl~~~ni~~la~AI~~  417 (420)
                      ||      +    ||+++ .+++.++.-.+.|.+
T Consensus       478 pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~rl~~  510 (517)
T PRK13355        478 QGTGFNWDKPDHFRVVYL-PRLEDLEDAMDRLAD  510 (517)
T ss_pred             CcchhCCCCcCEEEEEeC-CCHHHHHHHHHHHHH
Confidence            85      1    99996 455554444444443

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.77  E-value=7.7e-17  Score=163.84  Aligned_cols=240  Identities=16%  Similarity=0.137  Sum_probs=165.7

Q ss_pred             chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      |+++ +..+.+.+...+.+..++  ..++++|||+.|.   ++  +.+++.+.++......+.....|.+..|+++||++
T Consensus         4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a   77 (385)
T PRK09276          4 LADR-IKNLPPYLFAEIDKKKAEKIARGVDVISLGIGD---PD--LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKA   77 (385)
T ss_pred             hhhH-hhhCCccHHHHHHHHHHHHHhcCCCEEEecCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence            4444 555555555554444332  2456789999995   43  45677788887776544345789999999999999


Q ss_pred             HHHHHcCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        212 AAQLAYGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      +++++....+..++++ .|                      +.|.|+++++.+++..+  +.| ||+|++++|+|+.|..
T Consensus        78 ia~~~~~~~g~~~~~~~~i----------------------i~t~G~~~~i~~~~~~~--~~~-gd~Vl~~~P~y~~~~~  132 (385)
T PRK09276         78 VADWYKRRFGVELDPETEV----------------------ISLIGSKEGIAHIPLAF--VNP-GDVVLVPDPGYPVYKI  132 (385)
T ss_pred             HHHHHHHHhCCCCCCCCcE----------------------EEccCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcChHH
Confidence            9999853222223333 23                      56899999999988765  457 9999999999999999


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      .++..|++                                                                        
T Consensus       133 ~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~  212 (385)
T PRK09276        133 GTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIA  212 (385)
T ss_pred             HHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhhee
Confidence            98887764                                                                        


Q ss_pred             ----------------------------------------------h--hhhhhc-cCCCchHHHHHHHHHhCChhhHHH
Q psy16707        299 ----------------------------------------------K--ILIRAF-YSSPPIHGARIVQEILGDPKLKAQ  329 (420)
Q Consensus       299 ----------------------------------------------~--~~~r~~-~s~pp~~ga~iv~~IL~dp~L~~~  329 (420)
                                                                    .  ...+.. .++++...+.++..+|.+      
T Consensus       213 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~------  286 (385)
T PRK09276        213 YDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG------  286 (385)
T ss_pred             cCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC------
Confidence                                                          0  111222 223344455555555643      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G  396 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g  396 (420)
                      +.+.++.++++++++|+.+.+.|++.|    +....+++|+|.|+.++     .+++++|++++||++.|+        +
T Consensus       287 ~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~  362 (385)
T PRK09276        287 PQEVVEELRKIYQERRDILVEGLRKLG----LEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEG  362 (385)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCC
Confidence            234566677999999999999999876    55566778888887553     355688888999999985        2


Q ss_pred             --cEEEcccCCCCHHHHHHHHHHH
Q psy16707        397 --RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       397 --Ris~agl~~~ni~~la~AI~~v  418 (420)
                        ||+++ .++   +.+.++|++.
T Consensus       363 ~~Ris~~-~~~---~~l~~~l~~l  382 (385)
T PRK09276        363 YFRIALT-VPD---ERIEEAVERI  382 (385)
T ss_pred             eEEEEeC-CCH---HHHHHHHHHH
Confidence              99997 443   5666666553

>PRK08068 transaminase; Reviewed

Probab=99.77  E-value=8.3e-17  Score=164.15  Aligned_cols=235  Identities=17%  Similarity=0.181  Sum_probs=159.6

Q ss_pred             ccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+....+..+.....  ....++.|||+.|.   ++.  +.++.++++......+.....|.|..|.++||+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~~--~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~   83 (389)
T PRK08068          9 LKQLPKQFFASLVAKVNKKVAEGHDVINLGQGN---PDQ--PTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFY   83 (389)
T ss_pred             hhhcCccHHHHHHHHHHHHHhcCCCeEEecCCC---CCC--CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            34444444444444332  12245789999995   544  456677777776654434578999999999999999998


Q ss_pred             cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        217 YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       217 ~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                      ....+..++++ .|                      +.|.||+.++.+++..+  +.| ||+|++|+|+|++|...++..
T Consensus        84 ~~~~g~~~~~~~~i----------------------~it~G~~~~l~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~  138 (389)
T PRK08068         84 KREYGVTLDPETEV----------------------AILFGGKAGLVELPQCL--MNP-GDTILVPDPGYPDYLSGVALA  138 (389)
T ss_pred             HHHhCCCCCCCccE----------------------EEcCCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHhc
Confidence            43222223444 34                      56999999998877644  457 999999999999999999888


Q ss_pred             Ccc-----------------------------------------------------------------------------
Q psy16707        296 GLE-----------------------------------------------------------------------------  298 (420)
Q Consensus       296 G~~-----------------------------------------------------------------------------  298 (420)
                      |++                                                                             
T Consensus       139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~  218 (389)
T PRK08068        139 RAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK  218 (389)
T ss_pred             CCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence            875                                                                             


Q ss_pred             -----------------------------------------h--hhhhhcc-CCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 -----------------------------------------K--ILIRAFY-SSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 -----------------------------------------~--~~~r~~~-s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                               .  ...+..+ .+++...|.++...|.+.   .   +++
T Consensus       219 ~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~---~~~  292 (389)
T PRK08068        219 PVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD---Q---SCV  292 (389)
T ss_pred             CcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCc---H---HHH
Confidence                                                     1  1112222 233433455555555332   1   456


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------C--cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------G--RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------g--Ris  399 (420)
                      +.++++++++|+.+.+.|++.|    |...++++|+|.|+.++     .++.+.|++++||++.|+        +  ||+
T Consensus       293 ~~~~~~~~~~r~~~~~~L~~~g----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~  368 (389)
T PRK08068        293 AELVARYESRRNAFISACREIG----WEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVG  368 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEE
Confidence            6777999999999999999987    66667788899887543     356688887899999884        1  999


Q ss_pred             EcccCCCCHHHHHHHHHH
Q psy16707        400 MAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       400 ~agl~~~ni~~la~AI~~  417 (420)
                      ++ .++   +.+.+++.+
T Consensus       369 ~~-~~~---~~l~~al~~  382 (389)
T PRK08068        369 LL-TDE---ERLREAVER  382 (389)
T ss_pred             Ec-CCH---HHHHHHHHH
Confidence            96 343   555555554

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.77  E-value=7.4e-17  Score=162.93  Aligned_cols=238  Identities=13%  Similarity=0.174  Sum_probs=169.1

Q ss_pred             ccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        132 IRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       132 ~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      |+||.+ ++....+++..+.....+. ..++|||++|.   ++.  +.++.++++...+..   ...|.+..|.++||++
T Consensus         1 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~---p~~--~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~   70 (364)
T PRK07865          1 MPVSAR-LPDFPWDTLAPAKATAAAH-PDGIVDLSVGT---PVD--PVPPVIQEALAAAAD---APGYPTTAGTPELREA   70 (364)
T ss_pred             CCcccc-CCCccHHHHHHHHHHHHhc-CCCEEEcCCCC---CCC--CCCHHHHHHHHHHHh---hCCCCCccCCHHHHHH
Confidence            567877 7777888888877666543 34689999996   443  556788888766532   3589999999999999


Q ss_pred             HHHHHcCCCCcc-ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        212 AAQLAYGEDCPQ-LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       212 ~~~~~~g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      +++++....+.. +++++|                      +.|.|+++++.+++.++. +.| ||.|++++|+|+.|..
T Consensus        71 ia~~l~~~~~~~~~~~~~I----------------------~it~G~~~~i~~~~~~l~-~~~-gd~Vl~~~p~y~~~~~  126 (364)
T PRK07865         71 IVGWLARRRGVTGLDPAAV----------------------LPVIGSKELVAWLPTLLG-LGP-GDVVVIPELAYPTYEV  126 (364)
T ss_pred             HHHHHHHHcCCCCCCcccE----------------------EEccChHHHHHHHHHHHc-CCC-CCEEEECCCCcccHHH
Confidence            999995443322 455655                      669999999998776552 457 9999999999999999


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      .++..|++                                                                        
T Consensus       127 ~~~~~g~~~~~~~~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~  206 (364)
T PRK07865        127 GARLAGATVVRADSLTELGPQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR  206 (364)
T ss_pred             HHHhcCCEEEecCChhhCCcccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcccccc
Confidence            99988875                                                                        


Q ss_pred             ------------------------------------hh---hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16707        299 ------------------------------------KI---LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMAD  339 (420)
Q Consensus       299 ------------------------------------~~---~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~  339 (420)
                                                          ..   .......++|...|.++..+|.+    .+   .++.++.
T Consensus       207 ~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~---~~~~~~~  279 (364)
T PRK07865        207 VCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD----DA---HVREQRE  279 (364)
T ss_pred             ccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----HH---HHHHHHH
Confidence                                                00   01112223456677766666654    22   3456668


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCC
Q psy16707        340 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKN  407 (420)
Q Consensus       340 r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~n  407 (420)
                      +++++|+.+.+.|++.|    |....+++|+|.|+.+  +...+..+++++||++.|+        +  ||++++ +.++
T Consensus       280 ~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~  354 (364)
T PRK07865        280 RYARRRAVLRPALEAAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TDER  354 (364)
T ss_pred             HHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CHHH
Confidence            99999999999999876    5556678899999765  3344444457899999884        1  999985 4455


Q ss_pred             HHHHHHHH
Q psy16707        408 VGYLAKAI  415 (420)
Q Consensus       408 i~~la~AI  415 (420)
                      +++..+.|
T Consensus       355 ~~~~~~~l  362 (364)
T PRK07865        355 IAAAVERL  362 (364)
T ss_pred             HHHHHHHh
Confidence            55544443

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.77  E-value=8.3e-17  Score=165.17  Aligned_cols=238  Identities=14%  Similarity=0.138  Sum_probs=162.7

Q ss_pred             ccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        141 SVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      .+..+++..+.+.+++-  ..++.+||++|.   +++. .+...+.++.+.+ .+.....|.+..|.++||+++++++..
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~---p~~~-~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lR~~ia~~l~~   86 (403)
T PRK08636         12 RLPKYVFAEVNELKMAARRAGEDIIDFSMGN---PDGP-TPQHIIDKLCESA-QKPKTHGYSVSKGIYKLRLAICNWYKR   86 (403)
T ss_pred             hCCccHHHHHHHHHHHHHhcCCCEEEcCCcC---CCCC-CCHHHHHHHHHHh-cCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence            44555666565554322  346789999995   6653 2333444444333 223467999999999999999999843


Q ss_pred             CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .++..++++ +|                      +.|.|+++++.+++..+  +.| ||.|++++|+|++|..+++..|+
T Consensus        87 ~~~~~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~Vlv~~P~y~~~~~~~~~~g~  141 (403)
T PRK08636         87 KYNVDLDPETEV----------------------VATMGSKEGYVHLVQAI--TNP-GDVAIVPDPAYPIHSQAFILAGG  141 (403)
T ss_pred             HhCCCCCCCCeE----------------------EECCChHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHhcCC
Confidence            322223443 45                      66999999999998766  457 99999999999999988887665


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       142 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~  221 (403)
T PRK08636        142 NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADIT  221 (403)
T ss_pred             EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhc
Confidence            4                                                                               


Q ss_pred             ----------------------------------------------hhh--hhh-ccCCCchHHHHHHHHHhCChhhHHH
Q psy16707        299 ----------------------------------------------KIL--IRA-FYSSPPIHGARIVQEILGDPKLKAQ  329 (420)
Q Consensus       299 ----------------------------------------------~~~--~r~-~~s~pp~~ga~iv~~IL~dp~L~~~  329 (420)
                                                                    ..+  .+. ...+++...|.++..++++.     
T Consensus       222 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~-----  296 (403)
T PRK08636        222 FDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGD-----  296 (403)
T ss_pred             cCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc-----
Confidence                                                          111  111 11233445555555545421     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--------HHHHHHHHHhCCeEEeCC------
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------ATQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------~~~v~~Ll~e~~Vy~~p~------  395 (420)
                       .+.++.+++.|+++|+.+.+.|+..|    |.+..+++|+|.|+.++        .++++.+++++||.+.|+      
T Consensus       297 -~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~  371 (403)
T PRK08636        297 -QSCVEEIRETYRKRRDVLIESFANAG----WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEY  371 (403)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcC
Confidence             24466677999999999999999876    66677889999998664        356678888999999996      


Q ss_pred             --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                        +  ||+++ .++++++...+.|.+++
T Consensus       372 ~~~~iRi~~~-~~~~~l~~~~~rl~~~l  398 (403)
T PRK08636        372 GDEYVRIALI-ENENRIRQAARNIKKFL  398 (403)
T ss_pred             CCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence              1  99998 66666655555555543

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.76  E-value=1e-16  Score=164.40  Aligned_cols=245  Identities=14%  Similarity=0.131  Sum_probs=171.3

Q ss_pred             cchhhhccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK  210 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~  210 (420)
                      .|+++ ...+..+....+.+.++  ...++++|||++|.   ++  +++++.+.++...+..+ ....|.|+.|.++||+
T Consensus         5 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~   77 (402)
T PRK06107          5 VPAAR-VSRIKPSPSTAAAARARELRAAGRSIVDLTVGE---PD--FDTPDHIKQAAVAAIER-GETKYTLVNGTPALRK   77 (402)
T ss_pred             hhhHH-hhhcCccHHHHHHHHHHHHHhccCCEEEcCCCC---CC--CCCCHHHHHHHHHHHHc-CCCCCCCCCCCHHHHH
Confidence            34444 44444444434333322  12356889999997   33  45678888887777653 4568999999999999


Q ss_pred             HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      ++++++....+..+.+++|                      +.|.|+++|+.+++..+  +.| ||+|++|+|+|+.|..
T Consensus        78 ~ia~~l~~~~g~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~vl~~~p~y~~y~~  132 (402)
T PRK06107         78 AIIAKLERRNGLHYADNEI----------------------TVGGGAKQAIFLALMAT--LEA-GDEVIIPAPYWVSYPD  132 (402)
T ss_pred             HHHHHHHHhcCCCCChhhE----------------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEecCCCcCHHH
Confidence            9999884332222345555                      56999999999987643  557 9999999999999988


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      .+..+|+.                                                                        
T Consensus       133 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l  212 (402)
T PRK06107        133 MVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHI  212 (402)
T ss_pred             HHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcccc
Confidence            77766542                                                                        


Q ss_pred             ---------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhH
Q psy16707        299 ---------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLK  327 (420)
Q Consensus       299 ---------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~  327 (420)
                                                                         .......-.+++...|.++..+|.+.   
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---  289 (402)
T PRK06107        213 RFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGD---  289 (402)
T ss_pred             ccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCC---
Confidence                                                               11112223456778888888878542   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---------------C-HHHHHHHHHhCCeE
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---------------N-ATQVEKLIKEHSVY  391 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---------------~-~~~v~~Ll~e~~Vy  391 (420)
                      ..|   ++.++++++++|+.+.+.|++.+  + +...++++|||.|+.+               + .++++.|++++||.
T Consensus       290 ~~~---~~~~~~~~~~~~~~~~~~L~~~~--g-~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~  363 (402)
T PRK06107        290 QSF---VTESVAVYKQRRDYALALLNAIP--G-LSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVA  363 (402)
T ss_pred             hHH---HHHHHHHHHHHHHHHHHHHhcCC--C-CcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEE
Confidence            234   55566899999999999998862  1 6667788999999753               2 35678899999999


Q ss_pred             EeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        392 LTKDG--------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       392 ~~p~g--------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +.||.        |||++. +.++++...+.|.+++
T Consensus       364 v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l  398 (402)
T PRK06107        364 VVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAV  398 (402)
T ss_pred             EeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHH
Confidence            99972        999994 6677666666665543

>PRK07682 hypothetical protein; Validated

Probab=99.76  E-value=1.2e-16  Score=161.94  Aligned_cols=232  Identities=16%  Similarity=0.155  Sum_probs=163.4

Q ss_pred             CChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc
Q psy16707        144 VPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ  223 (420)
Q Consensus       144 ~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~  223 (420)
                      ..++..+.+....  .++.|+|++|.   ++  +.+++.+.++......+ ....|.|..|.++||+++++++....+..
T Consensus         6 ~~~~~~~~~~~~~--~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~   77 (378)
T PRK07682          6 PSGIRKFFDLAAN--MEGVISLGVGE---PD--FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVS   77 (378)
T ss_pred             ccHHHHHHHHHHh--cCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Confidence            3344444444322  24789999997   43  23455666666555433 35779999999999999999995332222


Q ss_pred             ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----
Q psy16707        224 LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----  298 (420)
Q Consensus       224 ~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----  298 (420)
                      ++++ .|                      +.|.||++|+.+++..+  +.| ||+|++++|+|+.|...++..|.+    
T Consensus        78 ~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~~  132 (378)
T PRK07682         78 YDPNDEI----------------------IVTVGASQALDVAMRAI--INP-GDEVLIVEPSFVSYAPLVTLAGGVPVPV  132 (378)
T ss_pred             CCCCCcE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEeCCCchhhHHHHHHcCCEEEEe
Confidence            3332 34                      67999999999988755  557 999999999999999998877653    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       133 ~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~  212 (378)
T PRK07682        133 ATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIK  212 (378)
T ss_pred             ecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcc
Confidence                                                                                            


Q ss_pred             ------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRII  342 (420)
Q Consensus       299 ------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~  342 (420)
                                                          .........++|...|.++..+|++.   .   .+++.++++++
T Consensus       213 ~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~---~~~~~~~~~~~  286 (378)
T PRK07682        213 GMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAG---N---DDVIRMRDSYR  286 (378)
T ss_pred             cccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCC---h---HHHHHHHHHHH
Confidence                                                11112233456777888777777542   1   23667779999


Q ss_pred             HHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCC
Q psy16707        343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSK  406 (420)
Q Consensus       343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~  406 (420)
                      ++|+.+.+.|++.|    +....+++|+|.|..+     +. ++++.|++++||++.||        +  |||++. +.+
T Consensus       287 ~~~~~~~~~L~~~~----~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~  361 (378)
T PRK07682        287 KRRNFFVTSFNEIG----LTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLE  361 (378)
T ss_pred             HHHHHHHHHHHHCC----CccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHH
Confidence            99999999999987    5556778899998633     33 56678888999999985        1  999985 566


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      .++...+.|.+++
T Consensus       362 ~l~~~l~~l~~~l  374 (378)
T PRK07682        362 QLQEAMKRMKRFV  374 (378)
T ss_pred             HHHHHHHHHHHHH
Confidence            6666666666553

>PRK07683 aminotransferase A; Validated

Probab=99.76  E-value=1.4e-16  Score=162.63  Aligned_cols=235  Identities=14%  Similarity=0.178  Sum_probs=166.5

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+...++..+...+.  ..+++|||++|.   ++  +++++.++++...+..+ ....|.|..|.++||+++++++..
T Consensus         9 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~---p~--~~~~~~~~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~   80 (387)
T PRK07683          9 VKDIQISGIRQFSNMVQ--NYDNLISLTIGQ---PD--FPTPSHVKEAAKRAITE-NYTSYTHNAGLLELRKAACNFVKD   80 (387)
T ss_pred             HHhCCccHHHHHHHHHH--hcCCeEEecCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHH
Confidence            34444555555555553  345789999996   43  46677888888877653 457899999999999999999853


Q ss_pred             CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .++..++++ +|                      +.|.|+++|+.+++..+  +.| ||+|++|+|+|++|...++..|+
T Consensus        81 ~~g~~~~~~~~I----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~~~g~  135 (387)
T PRK07683         81 KYDLHYSPESEI----------------------IVTIGASEAIDIAFRTI--LEP-GTEVILPAPIYPGYEPIIRLCGA  135 (387)
T ss_pred             HhCCCCCCCCcE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEcCCCccchHHHHHHcCC
Confidence            322223333 44                      67999999999988755  457 99999999999999999998877


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       136 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~  215 (387)
T PRK07683        136 KPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSI  215 (387)
T ss_pred             EEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCCh
Confidence            5                                                                               


Q ss_pred             ----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q psy16707        299 ----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMA  338 (420)
Q Consensus       299 ----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~  338 (420)
                                                              .......+.+++...|.++..+|.+..      .+++.++
T Consensus       216 ~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~  289 (387)
T PRK07683        216 AHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGK------DDAKMMR  289 (387)
T ss_pred             hhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh------HHHHHHH
Confidence                                                    111122334456677887777775431      2456667


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcc
Q psy16707        339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--------G--RISMAG  402 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~ag  402 (420)
                      .+++++|+.+.+.|++.|    +....+++|+|.|..+     ++ +++..|++++||.+.|+        +  ||+++.
T Consensus       290 ~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~  365 (387)
T PRK07683        290 HQYKKRRDYVYNRLISMG----LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY  365 (387)
T ss_pred             HHHHHHHHHHHHHHHHcC----CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC
Confidence            899999999999998876    5666788899998633     33 45678889999999885        1  999984


Q ss_pred             cCCCCHHHHHHHHHH
Q psy16707        403 VTSKNVGYLAKAIHA  417 (420)
Q Consensus       403 l~~~ni~~la~AI~~  417 (420)
                       +.+.+....+.|.+
T Consensus       366 -~~~~~~~al~~l~~  379 (387)
T PRK07683        366 -SIETLKEGLDRLEA  379 (387)
T ss_pred             -CHHHHHHHHHHHHH
Confidence             44444433333333

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.76  E-value=1.4e-16  Score=162.85  Aligned_cols=244  Identities=15%  Similarity=0.224  Sum_probs=174.3

Q ss_pred             cccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707        131 PIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK  210 (420)
Q Consensus       131 p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~  210 (420)
                      +..|+++ +..+..+.+..+.+..  ...++.||++.|.   ++  +.+++.+.++......+ ....|.|..|.++||+
T Consensus         4 ~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~   74 (391)
T PRK07309          4 TKRFNKQ-LDKIEVSLIRQFDQSI--SDIPGILKLTLGE---PD--FTTPDHVKEAAKRAIDA-NQSHYTGMAGLLELRQ   74 (391)
T ss_pred             hhHHHhh-hhhcCccHHHHHHHHH--HhcCCeEEcCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHH
Confidence            3456666 6677777776666544  2236789999997   43  45577788887766543 3457999999999999


Q ss_pred             HHHHHHcCCCCcccc-CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        211 LAAQLAYGEDCPQLK-DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       211 a~~~~~~g~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      ++++++...++..+. +++|                      +.|.|+++++.+++..+  +.| ||+|++++|+|++|.
T Consensus        75 ~ia~~~~~~~~~~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~vl~~~p~y~~~~  129 (391)
T PRK07309         75 AAADFVKEKYNLDYAPENEI----------------------LVTIGATEALSASLTAI--LEP-GDKVLLPAPAYPGYE  129 (391)
T ss_pred             HHHHHHHHHhCCCCCCCCcE----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEeCCCCcchH
Confidence            999998654433233 2344                      67999999999988755  457 999999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      .+++..|.+                                                                       
T Consensus       130 ~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~  209 (391)
T PRK07309        130 PIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS  209 (391)
T ss_pred             HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcccc
Confidence            999888774                                                                       


Q ss_pred             -----------------------------------------------hhh--h-hhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 -----------------------------------------------KIL--I-RAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 -----------------------------------------------~~~--~-r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                     ..+  . .....+++...+.++..+|.+.   .
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~  286 (391)
T PRK07309        210 ELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNG---K  286 (391)
T ss_pred             ceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCC---h
Confidence                                                           111  1 1223356667788777777653   1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------HHHHHHHHHhCCeEEeCCC-----
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTKDG-----  396 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------~~~v~~Ll~e~~Vy~~p~g-----  396 (420)
                      .|   ...++.+++++|+.+.+.|++.|    +.+..+++|+|.|+.++       .+.+++|++++||.+.|+.     
T Consensus       287 ~~---~~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~  359 (391)
T PRK07309        287 DD---ALPMKKEYIKRRDYIIEKMTDLG----FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPY  359 (391)
T ss_pred             hH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCC
Confidence            22   24566889999999999999876    56677888999986433       3456788889999998852     


Q ss_pred             -----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        397 -----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                           ||+++. +.++++...++|.+++
T Consensus       360 ~~~~iRi~~~~-~~~~l~~~i~~l~~~~  386 (391)
T PRK07309        360 GEGYVRLSYAA-SMETIKEAMKRLKEYM  386 (391)
T ss_pred             CCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence                 999985 5556666666665543

>PRK09082 methionine aminotransferase; Validated

Probab=99.76  E-value=1.3e-16  Score=162.62  Aligned_cols=239  Identities=15%  Similarity=0.101  Sum_probs=165.6

Q ss_pred             CcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        130 LPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       130 ~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      +|.-++++ ...+....+..+.+.++   ..++|||++|.   ++.  +.++.+.++.....++ ....|.|..|.++||
T Consensus         4 ~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---~~~--~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr   73 (386)
T PRK09082          4 NPLIPQSK-LPNVGTTIFTVMSALAA---EHGAINLSQGF---PDF--DGPPYLVEALAYAMAA-GHNQYPPMTGVAALR   73 (386)
T ss_pred             CchhhhhH-hhccCccHHHHHHHHHh---hCCEEEecCCC---CCC--CCCHHHHHHHHHHHHc-CCCCCCCCCCcHHHH
Confidence            45445555 55555444444443332   24689999996   443  4466777777776543 457899999999999


Q ss_pred             HHHHHHHcCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        210 KLAAQLAYGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +++++++....+...+++ .|                      +.|.||++++.+++..+  +.| ||+|++++|+|++|
T Consensus        74 ~~~a~~l~~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~Vli~~p~y~~~  128 (386)
T PRK09082         74 EAIAAKTARLYGRQYDADSEI----------------------TVTAGATEALFAAILAL--VRP-GDEVIVFDPSYDSY  128 (386)
T ss_pred             HHHHHHHHHHhCCCCCCCCcE----------------------EEeCCHHHHHHHHHHHH--cCC-CCEEEEeCCCchhh
Confidence            999998733222112222 33                      66999999999988755  457 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++.+|.+                                                                      
T Consensus       129 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~  208 (386)
T PRK09082        129 APAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHI  208 (386)
T ss_pred             HHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhh
Confidence            9999988765                                                                      


Q ss_pred             --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                        ....+..-.+++...|.+++.+|.+     
T Consensus       209 ~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-----  283 (386)
T PRK09082        209 VFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA-----  283 (386)
T ss_pred             ccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-----
Confidence                                                              1122223345677788877777752     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCC------
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~------  395 (420)
                       +.++++.++..|+++|+.+.+.|++.|    |+..++++|||.|+.+      +. ++++.|++++||.+.|+      
T Consensus       284 -~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~  358 (386)
T PRK09082        284 -EPEHYLELPAFYQAKRDRFRAALANSR----FKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD  358 (386)
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC
Confidence             123345566899999999999999876    6667788999999643      33 56678889999999885      


Q ss_pred             ----C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        396 ----G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       396 ----g--Ris~agl~~~ni~~la~AI~~  417 (420)
                          +  ||+++. ++   +.+.+++.+
T Consensus       359 ~~~~~~~Ri~~~~-~~---~~l~~~~~r  382 (386)
T PRK09082        359 PFPHRLVRLCFAK-QE---ETLDAAAER  382 (386)
T ss_pred             CCCCCEEEEEecC-CH---HHHHHHHHH
Confidence                1  999984 44   444454443

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.75  E-value=1.7e-16  Score=161.66  Aligned_cols=232  Identities=15%  Similarity=0.110  Sum_probs=163.3

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHH-HHHHHHccCCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQ-ADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~-a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++....+.+..+.+..++  .++.|||++|.   ++.  ++++.+.+ +.....  .....|.+..|.++||+++++++.
T Consensus        10 ~~~~~~~~~~~~~~~~~~--~~~~i~l~~g~---p~~--~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~   80 (384)
T PRK06348         10 YQQMEVNIMAEIATLAKK--FPDIIDLSLGD---PDL--ITDESIINAAFEDAK--KGHTRYTDSGGDVELIEEIIKYYS   80 (384)
T ss_pred             HhcCCccHHHHHHHHHHh--cCCcEEcCCCC---CCC--CCCHHHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHHHH
Confidence            556667777777766543  35789999995   543  44555544 433332  245789999999999999999985


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      ...+..+++++|                      +.|.|++.++.+++..+  +.| ||+|++++|+|++|...++.+|+
T Consensus        81 ~~~~~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g~  135 (384)
T PRK06348         81 KNYDLSFKRNEI----------------------MATVGACHGMYLALQSI--LDP-GDEVIIHEPYFTPYKDQIEMVGG  135 (384)
T ss_pred             HHhCCCCChhhE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEeCCCCcchHHHHHHcCC
Confidence            443333456655                      56999999999988755  457 99999999999999999988765


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       136 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~  215 (384)
T PRK06348        136 KPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVP  215 (384)
T ss_pred             EEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccc
Confidence            3                                                                               


Q ss_pred             -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707        299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM  337 (420)
Q Consensus       299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m  337 (420)
                                                               ....+....+++..+|.++..+|.+.      .+.++.+
T Consensus       216 ~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~  289 (384)
T PRK06348        216 MATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHR------DTIVPLI  289 (384)
T ss_pred             hhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc------HHHHHHH
Confidence                                                     11122233456777888777767532      2345566


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCCC----------cEEEc
Q psy16707        338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKDG----------RISMA  401 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~g----------Ris~a  401 (420)
                      ++.++++|+.+.+.|+..+  + +....+++|||.|+.+     ++ ++++.|++++||.+.||.          ||+++
T Consensus       290 ~~~~~~r~~~~~~~L~~~~--~-~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~  366 (384)
T PRK06348        290 KEEFQKRLEYAYKRIESIP--N-LSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT  366 (384)
T ss_pred             HHHHHHHHHHHHHHHhcCC--C-ceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec
Confidence            6889999999999998752  2 5556778899999533     33 556788889999999851          99986


Q ss_pred             ccCCCCHHHHHHHHHH
Q psy16707        402 GVTSKNVGYLAKAIHA  417 (420)
Q Consensus       402 gl~~~ni~~la~AI~~  417 (420)
                       .+.   +.+.+++.+
T Consensus       367 -~~~---~~l~~al~~  378 (384)
T PRK06348        367 -VGI---EVLEEAFNR  378 (384)
T ss_pred             -CCH---HHHHHHHHH
Confidence             444   455555443

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.75  E-value=2.4e-16  Score=161.00  Aligned_cols=220  Identities=18%  Similarity=0.189  Sum_probs=156.0

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcccc-CCceeeecccCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLK-DNLISIVQGISGT  238 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~-~~~i~~~~~~~~~  238 (420)
                      +++++|+.|.   ++  +++++.+.+|............|.+..|.+++|+++++++....+..++ ++.|         
T Consensus        27 ~~~~~l~~g~---~~--~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i---------   92 (389)
T PRK05957         27 PGTISLGQGV---VS--YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAI---------   92 (389)
T ss_pred             CCeEEccCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeE---------
Confidence            5789999997   33  4567788888877654444568999999999999999988433221122 3334         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|++.++..++..+  +.| ||+|++++|+|++|...++..|++                    
T Consensus        93 -------------~~t~G~~~~l~~~~~~~--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  156 (389)
T PRK05957         93 -------------VVTAGSNMAFMNAILAI--TDP-GDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQA  156 (389)
T ss_pred             -------------EEeCChHHHHHHHHHHh--cCC-CCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHh
Confidence                         67999999998887654  457 999999999999999988888875                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       157 i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g  236 (389)
T PRK05957        157 ITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG  236 (389)
T ss_pred             cCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhcc
Confidence                                                                                            


Q ss_pred             -------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 -------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 -------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                         .........++|.+.|.++..+|+++   ..|.   ++.+++|+++|+.+.+.|++.+  +
T Consensus       237 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~---~~~~~~~~~~r~~l~~~L~~~~--~  308 (389)
T PRK05957        237 FASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVG---KSYC---QQHLPEIAQVRQILLKSLGQLQ--D  308 (389)
T ss_pred             CccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCC---hHHH---HHHHHHHHHHHHHHHHHHHhcC--C
Confidence                               11112233466778898888877653   1332   3334668999999999998763  2


Q ss_pred             CCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        360 PWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       360 ~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~  417 (420)
                      -|...+++.|||.|+.+    ++ ++++.|++++||++.||        +  |||++..+.+.++.-.+.|.+
T Consensus       309 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~  381 (389)
T PRK05957        309 RCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQ  381 (389)
T ss_pred             CccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence            23445667789998643    33 67788888999999985        1  999987776554444444433

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.75  E-value=3.9e-16  Score=159.64  Aligned_cols=242  Identities=18%  Similarity=0.223  Sum_probs=164.1

Q ss_pred             ccchhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        132 IRFQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       132 ~~~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      ++++++ +..+.++....+.+....  ..+.++|||++|.   |++ +++...++.+...+. +...+.|.+..|.++||
T Consensus         6 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~---p~~-~~p~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr   79 (394)
T PRK05942          6 ITPADR-LQALPPYVFARLDELKARAREQGLDLIDLGMGN---PDG-AAPQPVIEAAIAALA-DPQNHGYPPFEGTASFR   79 (394)
T ss_pred             cchhhh-hccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCC---CCC-CCCHHHHHHHHHHHh-CCCCccCCCCCCCHHHH
Confidence            344544 555555544444443321  1346789999994   666 233334444444443 23457899999999999


Q ss_pred             HHHHHHHcCCCCccccCCc-eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        210 KLAAQLAYGEDCPQLKDNL-ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +++++++....+..++++. |                      +.|.|++.++.+++..+  +.| ||+|++++|+|++|
T Consensus        80 ~aia~~~~~~~~~~~~~~~~i----------------------~vt~G~~~al~~~~~~~--~~~-gd~Vlv~~P~y~~~  134 (394)
T PRK05942         80 QAITDWYHRRYGVELDPDSEA----------------------LPLLGSKEGLTHLALAY--VNP-GDVVLVPSPAYPAH  134 (394)
T ss_pred             HHHHHHHHHHHCCCcCCCCeE----------------------EEccChHHHHHHHHHHh--CCC-CCEEEEcCCCCcch
Confidence            9999998533222233432 3                      56999999999988655  557 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++..|++                                                                      
T Consensus       135 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~  214 (394)
T PRK05942        135 FRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAE  214 (394)
T ss_pred             HHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchh
Confidence            9888877764                                                                      


Q ss_pred             ------------------------------------------------hhh--hhh-ccCCCchHHHHHHHHHhCChhhH
Q psy16707        299 ------------------------------------------------KIL--IRA-FYSSPPIHGARIVQEILGDPKLK  327 (420)
Q Consensus       299 ------------------------------------------------~~~--~r~-~~s~pp~~ga~iv~~IL~dp~L~  327 (420)
                                                                      ..+  .+. .-.+++...|.++..+|..    
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~----  290 (394)
T PRK05942        215 LAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQL----  290 (394)
T ss_pred             hccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC----
Confidence                                                            111  111 1123455666666666642    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC------C
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD------G  396 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~------g  396 (420)
                        +.+.++.++++++++|+.+.+.|++.|    +....+++|+|.|+.++     .+++.++++++||.+.|+      +
T Consensus       291 --~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~  364 (394)
T PRK05942        291 --PDSYLQQVQERYRTRRDFLIQGLGELG----WNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGG  364 (394)
T ss_pred             --cHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCC
Confidence              234456677999999999999999876    56667788999987543     345677889999999884      1


Q ss_pred             ----cEEEcccCCCCHHHHHHHHHHH
Q psy16707        397 ----RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       397 ----Ris~agl~~~ni~~la~AI~~v  418 (420)
                          ||+++    ...+.+.+++.+.
T Consensus       365 ~~~iRis~~----~~~~~l~~~l~~l  386 (394)
T PRK05942        365 EGYVRISLI----ADCDRLGEALDRL  386 (394)
T ss_pred             CCeEEEEec----CCHHHHHHHHHHH
Confidence                99996    3568888888764

>PRK08912 hypothetical protein; Provisional

Probab=99.75  E-value=2.9e-16  Score=159.92  Aligned_cols=234  Identities=18%  Similarity=0.286  Sum_probs=155.1

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+...++..+.+...   .+++|||+.|.   |+. ++++..++.+.+.+. + ....|.|+.|.++||+++++++..
T Consensus         8 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---p~~-~~p~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~ia~~~~~   78 (387)
T PRK08912          8 FADLPTTIFEVMSQLAR---EHGAINLGQGF---PDD-PGPEDVRRAAADALL-D-GSNQYPPMMGLPELRQAVAAHYAR   78 (387)
T ss_pred             HhhCCCCHHHHHHHHHh---hCCeEEccCCC---CCC-CCCHHHHHHHHHHHh-c-CCCCCCCCCCcHHHHHHHHHHHHH
Confidence            44445555544444442   25789999997   554 233344444433332 2 357899999999999999998843


Q ss_pred             CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      ..+..++++ +|                      +.|.|+++++.+++..+  +.| ||+|++++|+|++|..+++..|+
T Consensus        79 ~~g~~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~Vlv~~p~y~~~~~~~~~~g~  133 (387)
T PRK08912         79 FQGLDLDPETEV----------------------MVTSGATEALAAALLAL--VEP-GDEVVLFQPLYDAYLPLIRRAGG  133 (387)
T ss_pred             HhCCCCCCcccE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHHHHHcCC
Confidence            222223333 34                      67999999998887655  457 99999999999999999998887


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       134 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~  213 (387)
T PRK08912        134 VPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIP  213 (387)
T ss_pred             EEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcC
Confidence            4                                                                               


Q ss_pred             --------------------------------------hhh--hhh--ccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q psy16707        299 --------------------------------------KIL--IRA--FYSSPPIHGARIVQEILGDPKLKAQWLTEVKG  336 (420)
Q Consensus       299 --------------------------------------~~~--~r~--~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~  336 (420)
                                                            ..+  .+.  .++.++ ..+.++...|...   .+|   ++.
T Consensus       214 ~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~-~~q~~~~~~l~~~---~~~---~~~  286 (387)
T PRK08912        214 LMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPP-NLQAAVAYGLGKP---DDY---FEG  286 (387)
T ss_pred             hhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhccccCCh-HHHHHHHHHHhCC---HHH---HHH
Confidence                                                  011  111  133333 3344444434211   233   456


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------H-HHHHHHHHhCCeEEeCC----------C--
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------A-TQVEKLIKEHSVYLTKD----------G--  396 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------~-~~v~~Ll~e~~Vy~~p~----------g--  396 (420)
                      ++++++++|+.+.+.|++.|    |....+++|+|.|+.++       + ++++.|++++||++.|+          +  
T Consensus       287 ~~~~~~~~~~~l~~~L~~~g----~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~i  362 (387)
T PRK08912        287 MRADLARSRDRLAAGLRRIG----FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVV  362 (387)
T ss_pred             HHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEE
Confidence            67999999999999999887    66677788999996542       3 46678888999999984          1  


Q ss_pred             cEEEcccCCCCHHHHHHHHHHH
Q psy16707        397 RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       397 Ris~agl~~~ni~~la~AI~~v  418 (420)
                      ||+++. +.+.++...+.|.++
T Consensus       363 Rl~~~~-~~~~l~~~l~rl~~~  383 (387)
T PRK08912        363 RFCFAK-RDATLDEAVERLAAA  383 (387)
T ss_pred             EEEEeC-CHHHHHHHHHHHHHH
Confidence            999995 455555545555444

>PLN02231 alanine transaminase

Probab=99.75  E-value=5.7e-16  Score=165.41  Aligned_cols=267  Identities=12%  Similarity=0.157  Sum_probs=182.6

Q ss_pred             CHHHHHHHHHhhC-CCc--ccchhhhcccc------CCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHH
Q psy16707        116 NVGYLAKAIHANG-SLP--IRFQDARTSSV------KVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQA  186 (420)
Q Consensus       116 ni~~va~ai~~v~-~~p--~~~~~~~~~~~------~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a  186 (420)
                      +|...|+.|.+-+ +.|  .+|.+-...++      ...|+.-+.+....-..++.||++.|.     . ..+..++++|
T Consensus        76 ~~~~~a~~~~~~~~~~~~~~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~~~p~~i~~~~~~-----~-~fp~~~i~~a  149 (534)
T PLN02231         76 EIVTIAQRLQEELKTNPGSYPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSLLDKSETH-----G-LFSADAIERA  149 (534)
T ss_pred             hHHHHHHHHHHHHhcCCCcCChhhhhhhccCCHHHcCCCccHHHHHHHHhccCCccCCCCCcc-----c-cCCHHHHHHH
Confidence            4555666666643 222  35555523233      223444444555545667999998664     3 3344888888


Q ss_pred             HHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHH
Q psy16707        187 DEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVG  264 (420)
Q Consensus       187 ~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~  264 (420)
                      .+.+...  .....|.+..|.++||+++++++...++..++++.|                      +.|.|+++++.++
T Consensus       150 ~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I----------------------~iT~Ga~~ai~~~  207 (534)
T PLN02231        150 WQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDI----------------------FLTDGASPAVHMM  207 (534)
T ss_pred             HHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccE----------------------EEeCCHHHHHHHH
Confidence            8766532  135679999999999999999997665544566666                      6799999999999


Q ss_pred             HHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------------------------------
Q psy16707        265 AAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------------------------------------  298 (420)
Q Consensus       265 ~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------------------------------------  298 (420)
                      +.+|.. .| ||.|++|+|+|+.|...++..|++                                              
T Consensus       208 ~~~l~~-~~-gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG  285 (534)
T PLN02231        208 MQLLIR-SE-KDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTG  285 (534)
T ss_pred             HHHhcc-CC-CCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCC
Confidence            886631 35 899999999999999998887764                                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       286 ~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~  365 (534)
T PLN02231        286 QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME  365 (534)
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence                                                                                            


Q ss_pred             -----------hhhhhhccCCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCc
Q psy16707        299 -----------KILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWN  362 (420)
Q Consensus       299 -----------~~~~r~~~s~pp~~ga~iv~~IL~dp----~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~  362 (420)
                                 .........|++..+|.++..++++|    .-..+|.++++.+++.|+++|+.+.+.|+++ |    |.
T Consensus       366 ~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~g----i~  441 (534)
T PLN02231        366 VTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEG----VT  441 (534)
T ss_pred             EecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----ce
Confidence                       00001112244556676666667654    1334666788888899999999999999986 3    67


Q ss_pred             ccCCCCceEEe--cCCCH---------------HHHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHHHHH
Q psy16707        363 HITDQIGMFCY--TGLNA---------------TQVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYLAKA  414 (420)
Q Consensus       363 ~i~~q~GmF~~--~~l~~---------------~~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~la~A  414 (420)
                      +..+++|||.|  +.++.               .++++|++++||.++||       |    |++++ .+.+.++...+.
T Consensus       442 ~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~~e~l~eal~R  520 (534)
T PLN02231        442 CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVSR  520 (534)
T ss_pred             ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CCHHHHHHHHHH
Confidence            77889999999  44332               24577899999999995       1    88885 455565554444


Q ss_pred             HHH
Q psy16707        415 IHA  417 (420)
Q Consensus       415 I~~  417 (420)
                      |.+
T Consensus       521 L~~  523 (534)
T PLN02231        521 LTE  523 (534)
T ss_pred             HHH
Confidence            443

>PLN02187 rooty/superroot1

Probab=99.74  E-value=2.5e-16  Score=165.25  Aligned_cols=227  Identities=17%  Similarity=0.113  Sum_probs=162.0

Q ss_pred             HHccCCCCceeecccccccCCC--CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707        154 FKKDTNVNKINLGVGAYRDDQG--KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISI  231 (420)
Q Consensus       154 ~~~d~~~~kInL~iG~y~d~dg--~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~  231 (420)
                      ...+...++|+|++|   |++.  .+.+++.+.++...+..+.....|.|..|.++||+++++++....+..+++++|  
T Consensus        60 ~~~~~~~~vi~l~~G---dp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I--  134 (462)
T PLN02187         60 CGKDVNKTILPLGHG---DPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDI--  134 (462)
T ss_pred             cccCCCCCeEECCCC---CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccE--
Confidence            344456889999999   4663  244556666666665544445789999999999999999985433333556666  


Q ss_pred             ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------
Q psy16707        232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------  298 (420)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------  298 (420)
                                          +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...++..|++             
T Consensus       135 --------------------~it~G~~~al~~~~~~l--~~p-Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~  191 (462)
T PLN02187        135 --------------------FLTAGCNQGIEIVFESL--ARP-NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWE  191 (462)
T ss_pred             --------------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCc
Confidence                                56999999999998866  458 999999999999999888888764             


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       192 ~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l  271 (462)
T PLN02187        192 IDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTL  271 (462)
T ss_pred             cCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEE
Confidence                                                                                            


Q ss_pred             ---------------------hh-------h---hhhc--c-CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q psy16707        299 ---------------------KI-------L---IRAF--Y-SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISM  344 (420)
Q Consensus       299 ---------------------~~-------~---~r~~--~-s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~  344 (420)
                                           ..       .   .+..  + ++++...|.++..+|.+.     ..+.++.+++.++++
T Consensus       272 ~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~-----~~~~l~~~~~~l~~~  346 (462)
T PLN02187        272 AGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA-----DKNFFAKKNKILKHN  346 (462)
T ss_pred             ecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHH
Confidence                                 00       0   1111  2 244677888887777541     124455666899999


Q ss_pred             HHHHHHHHHhcCCCCCCcc--cCCCCceEEecCC---------CH-HHHHHHHHhCCeEEeCCC--------cEEEcccC
Q psy16707        345 RQSLKDNLQKEGSNKPWNH--ITDQIGMFCYTGL---------NA-TQVEKLIKEHSVYLTKDG--------RISMAGVT  404 (420)
Q Consensus       345 R~~l~~~L~~~g~~~~w~~--i~~q~GmF~~~~l---------~~-~~v~~Ll~e~~Vy~~p~g--------Ris~agl~  404 (420)
                      |+.+.+.|++.+    +..  ..+++|+|.|+.+         ++ +++.+|+++.||.+.||.        |||++ ..
T Consensus       347 r~~l~~~L~~~~----~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~-~~  421 (462)
T PLN02187        347 VDLVCDRLKDIP----CVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIG-VE  421 (462)
T ss_pred             HHHHHHHHhhCC----CCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC-CC
Confidence            999999999864    222  2467789998743         23 667888899999999962        99998 45


Q ss_pred             CCCHHHHHHHHHHH
Q psy16707        405 SKNVGYLAKAIHAV  418 (420)
Q Consensus       405 ~~ni~~la~AI~~v  418 (420)
                      .++++.-.+.|.++
T Consensus       422 ~e~l~~al~rL~~~  435 (462)
T PLN02187        422 AHMLEDALERLKGF  435 (462)
T ss_pred             HHHHHHHHHHHHHH
Confidence            66655555555544

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.74  E-value=2.2e-16  Score=161.08  Aligned_cols=243  Identities=15%  Similarity=0.158  Sum_probs=169.4

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA  213 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~  213 (420)
                      |+.+ ...+....+..+.+....  .++.|||++|.   ++  +++++.++++...+..+ ....|.|..|.++||++++
T Consensus        10 ~~~~-~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia   80 (391)
T PRK08361         10 IAGR-INLIQRSKIRELFERASK--MENVISLGIGE---PD--FDTPKNIKEAAKRALDE-GWTHYTPNAGIPELREAIA   80 (391)
T ss_pred             hhHH-HHhCCccHHHHHHHHHHh--hcCeEEcCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHH
Confidence            3444 445555566666555422  25789999996   44  34468888887776643 4567999999999999999


Q ss_pred             HHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707        214 QLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK  293 (420)
Q Consensus       214 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~  293 (420)
                      +++....+..+++++|                      +.|.|+++++.+++..+  +.| ||.|++++|+|++|...++
T Consensus        81 ~~~~~~~g~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-g~~Vlv~~p~y~~~~~~~~  135 (391)
T PRK08361         81 EYYKKFYGVDVDVDNV----------------------IVTAGAYEATYLAFESL--LEE-GDEVIIPDPAFVCYVEDAK  135 (391)
T ss_pred             HHHHHHhCCCCCcccE----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCCcccHHHHH
Confidence            9983221112445555                      66999999999988755  457 9999999999999999988


Q ss_pred             hcCcc---------------------------------------------------------------------------
Q psy16707        294 HTGLE---------------------------------------------------------------------------  298 (420)
Q Consensus       294 ~aG~~---------------------------------------------------------------------------  298 (420)
                      ..|++                                                                           
T Consensus       136 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~  215 (391)
T PRK08361        136 IAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEG  215 (391)
T ss_pred             HcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCC
Confidence            87764                                                                           


Q ss_pred             -----------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 -----------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 -----------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                               .   ........+++...|.++..+|.++.   .| +.+
T Consensus       216 ~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~-~~~  291 (391)
T PRK08361        216 AKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKE---SW-KAV  291 (391)
T ss_pred             CCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCc---cc-HHH
Confidence                                                     1   11112234556667777777776642   22 567


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--------C--cE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--------G--RI  398 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--------g--Ri  398 (420)
                      +.++.+++++|+.+.+.|++.+  + +....+++|+|.|..+     +. ++++.|++++||.+.|+        +  ||
T Consensus       292 ~~~~~~~~~~~~~~~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi  368 (391)
T PRK08361        292 EEMRKEYNERRKLVLKRLKEMP--H-IKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRI  368 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC--C-CeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEE
Confidence            7888999999999999998862  1 5567778899998633     33 55577878899999884        1  99


Q ss_pred             EEcccCCCCHHHHHHHHHHH
Q psy16707        399 SMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       399 s~agl~~~ni~~la~AI~~v  418 (420)
                      +++. +++.++...+.|.++
T Consensus       369 ~~~~-~~~~l~~al~~l~~~  387 (391)
T PRK08361        369 SYAT-SKEKLIEAMERMEKA  387 (391)
T ss_pred             EecC-CHHHHHHHHHHHHHH
Confidence            9984 555555555555544

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.74  E-value=2.7e-16  Score=159.99  Aligned_cols=244  Identities=18%  Similarity=0.221  Sum_probs=177.1

Q ss_pred             cchhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK  210 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~  210 (420)
                      .||++ +..+.++++..+.+.+++  ...++.|||++|.   ++  +++++.++++......+ ....|.|..|.++||+
T Consensus         3 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~   75 (393)
T PRK05764          3 KLSKR-VSRVTPSATLAVTAKAKELKAQGRDVISLGAGE---PD--FDTPEHIKEAAIEALDD-GKTKYTPAAGIPELRE   75 (393)
T ss_pred             chhhh-hhhcCchHHHHHHHHHHHHHhccCCEEEeCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCcCCCCChHHHHH
Confidence            36666 778888887766555542  1246789999996   44  35567888887776643 3456999999999999


Q ss_pred             HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      ++++++...++..+++++|                      +.|.|+++++..++..+  +.+ ||.|++++|+|+.|..
T Consensus        76 ~ia~~~~~~~~~~~~~~~i----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~y~~~~~  130 (393)
T PRK05764         76 AIAAKLKRDNGLDYDPSQV----------------------IVTTGAKQALYNAFMAL--LDP-GDEVIIPAPYWVSYPE  130 (393)
T ss_pred             HHHHHHHHHhCCCCCHHHE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEecCCCCcchHH
Confidence            9999984433222445555                      66999999999887644  457 8999999999999999


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      +++..|.+                                                                        
T Consensus       131 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~  210 (393)
T PRK05764        131 MVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLV  210 (393)
T ss_pred             HHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccccee
Confidence            98887764                                                                        


Q ss_pred             --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                        ....+....+++...+.++..+|++.   .
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~  287 (393)
T PRK05764        211 YDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP---Q  287 (393)
T ss_pred             eCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCC---h
Confidence                                                              11122334566667777777667521   2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC-
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG-  396 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g-  396 (420)
                         +.++.++.+++++|+.+.+.|+++ |    +....+++|+|.|..++          .++++.|++++||.+.|+. 
T Consensus       288 ---~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~  360 (393)
T PRK05764        288 ---DEVEEMRQAFEERRDLMVDGLNEIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIA  360 (393)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhhCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccc
Confidence               345556688999999999999987 5    56667788899885432          3556788889999998852 


Q ss_pred             -------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        397 -------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                             |||++. +.+.++...++|.+++
T Consensus       361 f~~~~~vRis~~~-~~~~~~~~i~~l~~~~  389 (393)
T PRK05764        361 FGAPGYVRLSYAT-SLEDLEEGLERIERFL  389 (393)
T ss_pred             cCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence                   999985 7788888788777765

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.74  E-value=9.9e-18  Score=167.88  Aligned_cols=222  Identities=19%  Similarity=0.217  Sum_probs=165.3

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHH-HHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC-ceeeecccCCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEI-VLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN-LISIVQGISGT  238 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~-~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~  238 (420)
                      ++|||+.|.+.+..+. ++++.+.++... .......+.|+|..|.++||+++++++...++..++++ .|         
T Consensus         2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i---------   71 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQN-PPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANI---------   71 (363)
T ss_dssp             TEEESSSSSTSSTTSS-HHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGE---------
T ss_pred             CEEEEECCCCCCcccc-cchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEE---------
Confidence            6899999998777676 445544444433 32335789999999999999999999973333333333 23         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.+.|...++..+..++. ..+ ||+|++++|+|++|..+++..|++                    
T Consensus        72 -------------~~~~G~~~~~~~~~~~~~-~~~-~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  136 (363)
T PF00155_consen   72 -------------LVTSGAQAALFLLLRLLK-INP-GDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALE  136 (363)
T ss_dssp             -------------EEESHHHHHHHHHHHHHH-SST-TSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHH
T ss_pred             -------------EEecccccchhhhhhccc-ccc-cccceecCCccccccccccccCceeeeccccccccccccccccc
Confidence                         445555566666555442 446 899999999999999999999886                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       137 ~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~  216 (363)
T PF00155_consen  137 EALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVV  216 (363)
T ss_dssp             HHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEE
T ss_pred             cccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceee
Confidence                                                                                            


Q ss_pred             --------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 --------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL  352 (420)
Q Consensus       299 --------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L  352 (420)
                                                .......+.. +.+.+.++..+|.++...   .++++.++++++++|+.+.+.|
T Consensus       217 ~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L  292 (363)
T PF00155_consen  217 GSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSGLS-SSPMQAAAAAALSDPELV---EKWLEELRERLRENRDLLREAL  292 (363)
T ss_dssp             EESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccccccccccccccccchhhhhhhhhhccccccc-cchhhHHHHHhhhccccc---ccccccchhhHHHHHHHHHHHH
Confidence                                      1111223333 778888888888765332   3466777799999999999999


Q ss_pred             HhcCCCCCCcccCCCCceEEecCCCH----HHHHHHHHhCCeEEeCC--------CcEEEcccCCCCHHHHHHHH
Q psy16707        353 QKEGSNKPWNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       353 ~~~g~~~~w~~i~~q~GmF~~~~l~~----~~v~~Ll~e~~Vy~~p~--------gRis~agl~~~ni~~la~AI  415 (420)
                      ++.|    |....++.|+|.|..++.    ++.++|++++||++.|+        .||++|..+.++++.++++|
T Consensus       293 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  293 EEIG----ITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             HHTT----SEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             HHhh----hheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            9987    788888899999987663    56789998889999994        39999889999999998876

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.74  E-value=3.2e-16  Score=161.41  Aligned_cols=225  Identities=16%  Similarity=0.164  Sum_probs=162.9

Q ss_pred             cCCCCceeecccccccCCC--CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC------CccccCCc
Q psy16707        157 DTNVNKINLGVGAYRDDQG--KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED------CPQLKDNL  228 (420)
Q Consensus       157 d~~~~kInL~iG~y~d~dg--~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~------~~~~~~~~  228 (420)
                      ..++++|||++|.   |+.  +..+++.++++.....+......|.+..|.++||+++++++....      +..+++++
T Consensus        30 ~~~~~~i~l~~g~---p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~  106 (412)
T PTZ00433         30 PSPKSIIKLSVGD---PTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDN  106 (412)
T ss_pred             CCCCCeeecCCcC---CCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhh
Confidence            4678999999996   553  356788888888776554345789999999999999999985321      12244454


Q ss_pred             eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------
Q psy16707        229 ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------  298 (420)
Q Consensus       229 i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------  298 (420)
                      |                      +.|.|+++++.+++..+  +.| ||+|++++|+|+.|...++..|++          
T Consensus       107 i----------------------~it~G~~~al~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~  161 (412)
T PTZ00433        107 V----------------------VLCSGVSHAILMALTAL--CDE-GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEK  161 (412)
T ss_pred             E----------------------EEeCChHHHHHHHHHHh--cCC-CCEEEEccCCcccHHHHHHHcCCEEEEEecCccc
Confidence            4                      67999999999998766  457 999999999999999999888764          


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       162 ~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~  241 (412)
T PTZ00433        162 DWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPR  241 (412)
T ss_pred             cCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCce
Confidence                                                                                            


Q ss_pred             --------------------h---------hhh------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q psy16707        299 --------------------K---------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIIS  343 (420)
Q Consensus       299 --------------------~---------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~  343 (420)
                                          .         .++      +....+++...|.++..+|.+.     +...++++++++++
T Consensus       242 i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-----~~~~~~~~~~~~~~  316 (412)
T PTZ00433        242 VILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT-----PQEHLEQIVAKLEE  316 (412)
T ss_pred             EEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC-----cHHHHHHHHHHHHH
Confidence                                1         111      1223355667777776666531     22445566689999


Q ss_pred             HHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC--------cEEEcccCC
Q psy16707        344 MRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG--------RISMAGVTS  405 (420)
Q Consensus       344 ~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~  405 (420)
                      +|+.+.+.|++...   +.+..+++|+|.|+.++          .++++.|++++||.+.|+.        ||+++. .+
T Consensus       317 ~r~~l~~~L~~~~~---~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~  392 (412)
T PTZ00433        317 GAMVLYNHIGECIG---LSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PV  392 (412)
T ss_pred             HHHHHHHHHhcCCC---CcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CH
Confidence            99999999987521   56677889999996442          3677889888999999962        999974 45


Q ss_pred             CCHHHHHHHHHHH
Q psy16707        406 KNVGYLAKAIHAV  418 (420)
Q Consensus       406 ~ni~~la~AI~~v  418 (420)
                      ++++...+.|.++
T Consensus       393 e~l~~al~~l~~~  405 (412)
T PTZ00433        393 EVLREAVERIKAF  405 (412)
T ss_pred             HHHHHHHHHHHHH
Confidence            5555555555443

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.73  E-value=1.8e-16  Score=164.00  Aligned_cols=216  Identities=15%  Similarity=0.105  Sum_probs=167.3

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      ...++|+.|.   ++.  +++|.+.++...+..  ....|.+..|.++||+++++++-....   .+++|          
T Consensus        85 ~~~i~L~~g~---p~~--~~~p~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~I----------  144 (431)
T PRK15481         85 TPLHDLAGGN---PDP--QRLPDLSRYFARLSR--TPRLYGDAPVSPELHAWAARWLRDDCP---VAFEI----------  144 (431)
T ss_pred             chhhhhhcCC---CCh--hHhHHHHHHHHHhhh--hhhhcCCcCCCHHHHHHHHHHHhhccC---CcCeE----------
Confidence            4578999995   444  556667777666543  345799999999999999998632211   12334          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|+++++.+++..+  +.| ||+|++++|+|+.|...++.+|++                     
T Consensus       145 ------------iit~G~~~al~~~~~~l--~~p-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~  209 (431)
T PRK15481        145 ------------DLTSGAIDAIERLLCAH--LLP-GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALA  209 (431)
T ss_pred             ------------EEecCcHHHHHHHHHHh--CCC-CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHh
Confidence                        67999999999998755  458 999999999999999999999885                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       210 ~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlR  289 (431)
T PRK15481        210 QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLR  289 (431)
T ss_pred             cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCce
Confidence                                                                                            


Q ss_pred             -----------hhhh--hh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707        299 -----------KILI--RA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI  364 (420)
Q Consensus       299 -----------~~~~--r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i  364 (420)
                                 ..+.  +. ...+++...|.++..+|++    ++|.+.++.+++.|+++|+.+.+.|++.|    |.+.
T Consensus       290 iG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~----~~~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~  361 (431)
T PRK15481        290 LAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTD----PEYQARLAQARLFYAQRRQKLARALQQYG----IAIP  361 (431)
T ss_pred             eEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhC----ccHHHHHHHHHHHHHHHHHHHHHHHHHcC----Cccc
Confidence                       1111  12 2234678889989888876    45667788888999999999999999886    5666


Q ss_pred             CCCCceEEecCCC---HHHHHHHHHhCCeEEeCC-----------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        365 TDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD-----------GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       365 ~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~-----------gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      .+++|||.|+.++   .++++.| .++||.+.||           -|||++.+++++++...+.|++++
T Consensus       362 ~p~gg~f~~~~l~~~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~  429 (431)
T PRK15481        362 SPGDGLNLWLPLDTDSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL  429 (431)
T ss_pred             cCCCeEEEEEECCCCHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence            7899999998774   3455666 5799999884           199999999999999999999875

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.73  E-value=1.1e-15  Score=158.05  Aligned_cols=219  Identities=16%  Similarity=0.118  Sum_probs=158.9

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc-ccCC-ceeeecccC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ-LKDN-LISIVQGIS  236 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~-~~~~-~i~~~~~~~  236 (420)
                      ..++|||++|.   ++  +.+++.+.++............|.+ .|.++||+++++++...++.. ++++ .|       
T Consensus        43 ~~~~i~L~~g~---p~--~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I-------  109 (410)
T PRK06290         43 DMELIDMGVGE---PD--EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEV-------  109 (410)
T ss_pred             CCCeEEcCCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceE-------
Confidence            45689999997   43  3456677777665443334567875 899999999999984433222 3443 45       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|+++++.+++..+  +.| ||+|++|+|+|+.|...++..|++                  
T Consensus       110 ---------------~it~Gs~~al~~~~~~~--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~  171 (410)
T PRK06290        110 ---------------IHSIGSKPALAMLPSCF--INP-GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDS  171 (410)
T ss_pred             ---------------EEccCHHHHHHHHHHHh--CCC-CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHH
Confidence                           66999999999988755  457 999999999999999999888774                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       172 l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK  251 (410)
T PRK06290        172 IPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSK  251 (410)
T ss_pred             HHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechh
Confidence                                                                                            


Q ss_pred             ---------------------hhhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy16707        299 ---------------------KILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG  356 (420)
Q Consensus       299 ---------------------~~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g  356 (420)
                                           ....+. ...+++...|.++..+|.++    +|.   +.++.+++++|+.+.+.|++.|
T Consensus       252 ~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~----~~~---~~~~~~~~~~~~~l~~~L~~~g  324 (410)
T PRK06290        252 AYNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHP----EIT---EKIREKYSRRLDKLVKILNEVG  324 (410)
T ss_pred             hcCCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCc----HHH---HHHHHHHHHHHHHHHHHHHhCC
Confidence                                 111122 22344456777777777663    453   4556899999999999999887


Q ss_pred             CCCCCcccCCCCceEEecCCC------------HHHHHHHHHhCCeEEeCC------CcEEEccc--CCCCHHHHHHHHH
Q psy16707        357 SNKPWNHITDQIGMFCYTGLN------------ATQVEKLIKEHSVYLTKD------GRISMAGV--TSKNVGYLAKAIH  416 (420)
Q Consensus       357 ~~~~w~~i~~q~GmF~~~~l~------------~~~v~~Ll~e~~Vy~~p~------gRis~agl--~~~ni~~la~AI~  416 (420)
                          |....+++|||.|+.++            .+++++|+++.+|.+.|+      -||++|+.  +.++-+++.+++.
T Consensus       325 ----~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~  400 (410)
T PRK06290        325 ----FKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIK  400 (410)
T ss_pred             ----CeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHH
Confidence                66677889999986543            356789988888888885      29999863  6677788888887


Q ss_pred             HHh
Q psy16707        417 AVT  419 (420)
Q Consensus       417 ~vv  419 (420)
                      +++
T Consensus       401 ~~~  403 (410)
T PRK06290        401 RRL  403 (410)
T ss_pred             HHH
Confidence            764

>PRK08175 aminotransferase; Validated

Probab=99.72  E-value=9.8e-16  Score=156.72  Aligned_cols=219  Identities=15%  Similarity=0.181  Sum_probs=149.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC-ceeeecccCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN-LISIVQGISG  237 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~-~i~~~~~~~~  237 (420)
                      .+++|||+.|.   +++.  +++.+.++......+.....|.|..|+++||+++++++...++..++++ +|        
T Consensus        28 ~~~~i~l~~g~---p~~~--~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i--------   94 (395)
T PRK08175         28 GEDIIDFSMGN---PDGP--TPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEA--------   94 (395)
T ss_pred             CCCeEEcCCCC---CCCC--CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcE--------
Confidence            47899999995   7664  3454444444333333568899999999999999999854332223333 34        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                    +.|.|++.++.+.+..+  +.| ||+|++++|+|++|...++..|++                   
T Consensus        95 --------------~~t~G~~~~l~~~~~~~--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~  157 (395)
T PRK08175         95 --------------IVTIGSKEGLAHLMLAT--LDH-GDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERA  157 (395)
T ss_pred             --------------EEccCcHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHH
Confidence                          66999999999887654  457 999999999999999988888775                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       158 l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK  237 (395)
T PRK08175        158 IRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSK  237 (395)
T ss_pred             HhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccc
Confidence                                                                                            


Q ss_pred             -------------------hh--hhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy16707        299 -------------------KI--LIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG  356 (420)
Q Consensus       299 -------------------~~--~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g  356 (420)
                                         ..  ..+. ...+++...+.++...|.+      ..++++.++.+|+++|+.+.+.|++.|
T Consensus       238 ~~g~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~L~~~~  311 (395)
T PRK08175        238 SYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG------DQQCVRDIAEQYKRRRDVLVKGLHEAG  311 (395)
T ss_pred             cccCcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC------cHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                               00  0111 1112233344444444433      235677788999999999999999886


Q ss_pred             CCCCCcccCCCCceEEecCCC--------HHHHHHHHHhCCeEEeCC----------CcEEEcccCCCCHHHHHHHHHHH
Q psy16707        357 SNKPWNHITDQIGMFCYTGLN--------ATQVEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       357 ~~~~w~~i~~q~GmF~~~~l~--------~~~v~~Ll~e~~Vy~~p~----------gRis~agl~~~ni~~la~AI~~v  418 (420)
                          |....+.+|+|.|+.++        .++++.|++++||.+.|+          -||+++ .+.+.+....+.|.++
T Consensus       312 ----~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~  386 (395)
T PRK08175        312 ----WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAM  386 (395)
T ss_pred             ----CcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHH
Confidence                65566778999997553        345577888999999986          199987 3444444444444433

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.72  E-value=7.2e-16  Score=158.52  Aligned_cols=219  Identities=16%  Similarity=0.168  Sum_probs=158.7

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~  234 (420)
                      +++++||++|.   ++  .++++.|.++......+    .....|.|..|.++||+++++++....+..+++++|     
T Consensus        33 ~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I-----  102 (409)
T PRK07590         33 EAKIIRLGIGD---VT--QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEI-----  102 (409)
T ss_pred             CCceEEecCcC---CC--CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhE-----
Confidence            56899999996   43  34567777776665543    145789999999999999999986554444566666     


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc-------------c---
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL-------------E---  298 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~-------------~---  298 (420)
                                       +.|.|++.++.+...+   +.| ||+|++++|+|+.|..+++.+|.             .   
T Consensus       103 -----------------~it~Ga~~al~~l~~~---~~~-gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~  161 (409)
T PRK07590        103 -----------------FISDGAKCDTGNILDI---FGP-DNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLP  161 (409)
T ss_pred             -----------------EECCCHHHHHHHHHHh---cCC-CCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEee
Confidence                             5699999999886543   457 99999999999999999988874             1   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       162 ~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v  241 (409)
T PRK07590        162 CTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECA  241 (409)
T ss_pred             cccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccce
Confidence                                                                                            


Q ss_pred             -----------------------hhhhh-------------------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q psy16707        299 -----------------------KILIR-------------------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG  336 (420)
Q Consensus       299 -----------------------~~~~r-------------------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~  336 (420)
                                             ..++.                   ..+.+++...|.++..+|++.     ..++++.
T Consensus       242 i~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~~~~  316 (409)
T PRK07590        242 IEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-----GKAQIKE  316 (409)
T ss_pred             EEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-----cHHHHHH
Confidence                                   11111                   123456777888777777642     1245666


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----------cEEEc
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----------RISMA  401 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----------Ris~a  401 (420)
                      +++.++++|+.+.+.|++.|    |....+++|+|.|+.++     .++++.|++++||.+.|+.          |||++
T Consensus       317 ~~~~~~~~r~~l~~~L~~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~  392 (409)
T PRK07590        317 LIDYYMENAKIIREGLESAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF  392 (409)
T ss_pred             HHHHHHHHHHHHHHHHHhcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc
Confidence            77999999999999999876    55556678999997553     3566788889999999851          89875


Q ss_pred             ccCCCCHHHHHHHHHHH
Q psy16707        402 GVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       402 gl~~~ni~~la~AI~~v  418 (420)
                       .+.++++...+.|.++
T Consensus       393 -~~~~~l~~~l~rl~~~  408 (409)
T PRK07590        393 -GSRENVLEAMERIKKA  408 (409)
T ss_pred             -CCHHHHHHHHHHHHhh
Confidence             4555666555555543

>PRK07324 transaminase; Validated

Probab=99.72  E-value=3.5e-16  Score=159.24  Aligned_cols=212  Identities=17%  Similarity=0.091  Sum_probs=152.5

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +.++++|++|.   ++  +.+++.+ +|...... +....|++..|.++||+++++++.+     +++++|         
T Consensus        25 ~~~~~~~~~~e---~~--~~~~~~~-~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~v---------   83 (373)
T PRK07324         25 ESCIDSLTLEE---LL--ALAGKNP-EAFYQELG-QKKLTYGWIEGSPEFKEAVASLYQN-----VKPENI---------   83 (373)
T ss_pred             cCCCCCCcHHH---HH--hccCcch-HHHHHHHh-cCCccCCCCCCCHHHHHHHHHHhcC-----CChhhE---------
Confidence            57899999997   43  4556666 44444443 3467999999999999999998754     234555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++|+.+++..+  +.| ||+|++++|+|+.|..+++..|++                    
T Consensus        84 -------------i~t~G~~~al~~~~~~l--~~~-gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~  147 (373)
T PRK07324         84 -------------LQTNGATGANFLVLYAL--VEP-GDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELR  147 (373)
T ss_pred             -------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHH
Confidence                         67999999999988755  557 999999999999999988888764                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       148 ~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~  227 (373)
T PRK07324        148 RLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLP  227 (373)
T ss_pred             HhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCc
Confidence                                                                                            


Q ss_pred             -----------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16707        299 -----------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW  361 (420)
Q Consensus       299 -----------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w  361 (420)
                                       .........+++..++.++..+|++      +.+.++.+++.++++|+.+.+.|++.+   .+
T Consensus       228 G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~------~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~  298 (373)
T PRK07324        228 GIRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEH------RDAILERNRKIVRTNLAILDEWVAKEP---RV  298 (373)
T ss_pred             cceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC------HHHHHHHHHHHHHHHHHHHHHHHhcCC---Cc
Confidence                             1111122345566777777666653      345677788999999999999998763   15


Q ss_pred             cccCCCCceEEecCC----C-HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHH
Q psy16707        362 NHITDQIGMFCYTGL----N-ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       362 ~~i~~q~GmF~~~~l----~-~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~  417 (420)
                      ....++.|+|.|+.+    + .+++++|++++||.+.||.        |||++. +.+++..-.+.|.+
T Consensus       299 ~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~  366 (373)
T PRK07324        299 SYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSE  366 (373)
T ss_pred             eEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence            556777888776533    3 4678999999999999972        999984 44444443333333

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.71  E-value=9.6e-16  Score=161.11  Aligned_cols=241  Identities=16%  Similarity=0.233  Sum_probs=170.6

Q ss_pred             ccCCChHHHHHHHHHccC-----CC-CceeecccccccCCCCCCchHHHHHHHHHHHcc-----------CCCCCCCCCC
Q psy16707        141 SVKVPSSNLLTEAFKKDT-----NV-NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-----------NLDKEYAPII  203 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~d~-----~~-~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-----------~~~~~Y~p~~  203 (420)
                      +..+.+.+.....+..+.     ++ ..|||++++      .+...+.+.+..+.....           .....|.+..
T Consensus        13 ~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~E------n~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~   86 (468)
T PLN02450         13 HGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAE------NQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYH   86 (468)
T ss_pred             cCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhH------hHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCC
Confidence            444556665445554442     34 689999996      234446666655443110           1223599999


Q ss_pred             CCHHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707        204 GAPDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP  281 (420)
Q Consensus       204 G~~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp  281 (420)
                      |.++||+++++++....+  ..+++++|                      +.|.|+++++.+++..+  +.| ||.|++|
T Consensus        87 G~~~LR~aiA~~l~~~~~~~~~v~~~~I----------------------iit~Ga~~al~~l~~~l--~~p-Gd~Vlv~  141 (468)
T PLN02450         87 GLPAFKNALAEFMSEIRGNKVTFDPNKL----------------------VLTAGATSANETLMFCL--AEP-GDAFLLP  141 (468)
T ss_pred             ChHHHHHHHHHHHHHhhCCCCCcChHHe----------------------EEccChHHHHHHHHHHh--CCC-CCEEEEC
Confidence            999999999999843222  12455555                      66999999999988755  568 9999999


Q ss_pred             CCCCCCcHHHHh-hcCcc--------------------------------------------------------------
Q psy16707        282 TPTWGNHIPICK-HTGLE--------------------------------------------------------------  298 (420)
Q Consensus       282 dP~w~ny~~i~~-~aG~~--------------------------------------------------------------  298 (420)
                      +|+|+.|...+. ..|++                                                              
T Consensus       142 ~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~  221 (468)
T PLN02450        142 TPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFIT  221 (468)
T ss_pred             CCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHH
Confidence            999999988776 35543                                                              


Q ss_pred             -------------------------------------------------------------------hhh-----hhhcc
Q psy16707        299 -------------------------------------------------------------------KIL-----IRAFY  306 (420)
Q Consensus       299 -------------------------------------------------------------------~~~-----~r~~~  306 (420)
                                                                                         ..+     ....+
T Consensus       222 ~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~  301 (468)
T PLN02450        222 AKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSF  301 (468)
T ss_pred             HCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhc
Confidence                                                                               000     01224


Q ss_pred             CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH--------
Q psy16707        307 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA--------  378 (420)
Q Consensus       307 s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~--------  378 (420)
                      ++++...|.+++.+|+|.++..+   .++.++.+|+++|+.+.+.|++.|    +.+..++.|||.|+.++.        
T Consensus       302 ~~~s~~~Q~a~~~~L~~~~~~~~---~l~~~~~~l~~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l~~~~~~~~~~  374 (468)
T PLN02450        302 GLVSSQTQYLLSALLSDKKFTKN---YLEENQKRLKQRQKKLVSGLEAAG----IKCLKSNAGLFCWVDMRHLLKSNTFE  374 (468)
T ss_pred             CCCCHHHHHHHHHHhCCchhHHH---HHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCceEEEEEEchHhcCcCCch
Confidence            45677888888888887533222   466677999999999999999987    566788999999986641        


Q ss_pred             ---HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        379 ---TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       379 ---~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                         +..++|++++||.+.||        |  ||++++.+++.++...+.|.+++
T Consensus       375 ~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l  428 (468)
T PLN02450        375 AEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFV  428 (468)
T ss_pred             HHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence               34577888999999996        1  99999888888888777777654

>PRK07777 aminotransferase; Validated

Probab=99.70  E-value=2.8e-15  Score=152.65  Aligned_cols=234  Identities=13%  Similarity=0.138  Sum_probs=156.5

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+....+..+...+.   ..++|||++|.   ++..  .++.+.++....... ....|.+..|.++||+++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---p~~~--~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~   76 (387)
T PRK07777          6 LRPFGTTIFAEMSALAV---RTGAVNLGQGF---PDED--GPPEMLEAAQEAIAG-GVNQYPPGPGIPELRAAIAAQRRR   76 (387)
T ss_pred             hhhcCccHHHHHHHHHh---hCCeEEccCCC---CCCC--CCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHH
Confidence            34445556666666664   34789999997   4432  233455554444433 346799999999999999998732


Q ss_pred             CCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      ..+....++ +|                      +.|.||++|+.+++..+  +.| ||.|++++|+|+.|..+++.+|+
T Consensus        77 ~~g~~~~~~~~i----------------------~~t~G~~~al~~~~~~~--~~~-gd~vli~~p~y~~~~~~~~~~g~  131 (387)
T PRK07777         77 RYGLEYDPDTEV----------------------LVTVGATEAIAAAVLGL--VEP-GDEVLLIEPYYDSYAAVIAMAGA  131 (387)
T ss_pred             HhCCCCCCCCcE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHHHHHCCC
Confidence            221112232 34                      67999999998877544  457 99999999999999999888776


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       132 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~  211 (387)
T PRK07777        132 HRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARH  211 (387)
T ss_pred             EEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCc
Confidence            4                                                                               


Q ss_pred             -------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707        299 -------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK  335 (420)
Q Consensus       299 -------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~  335 (420)
                                                                 .........+++...+.++...|.++   .+|   ++
T Consensus       212 ~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~---~~  285 (387)
T PRK07777        212 LPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAW---VA  285 (387)
T ss_pred             ccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHH---HH
Confidence                                                       01111111223444555555556442   344   45


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------C-HHHHHHHHHhCCeEEeCC-------------
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIKEHSVYLTKD-------------  395 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~-~~~v~~Ll~e~~Vy~~p~-------------  395 (420)
                      .+++.++++|+.+.+.|++.|    |..+++++|+|.|+.+      + .+++++|++++||++.|+             
T Consensus       286 ~~~~~~~~~~~~l~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~  361 (387)
T PRK07777        286 ALRDSLQAKRDRLAAGLAEAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHL  361 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHhCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCe
Confidence            566899999999999999876    6777788999998542      3 466788888999999874             


Q ss_pred             CcEEEcccCCCCHHHHHHHHHH
Q psy16707        396 GRISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       396 gRis~agl~~~ni~~la~AI~~  417 (420)
                      -||+++. ..++++.-.+.|.+
T Consensus       362 ~Ri~~~~-~~~~l~~~l~~l~~  382 (387)
T PRK07777        362 VRFAFCK-RDDTLDEAIRRLRA  382 (387)
T ss_pred             EEEEecC-CHHHHHHHHHHHHH
Confidence            1999974 55555444444444

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.70  E-value=4.1e-15  Score=152.06  Aligned_cols=237  Identities=14%  Similarity=0.088  Sum_probs=166.3

Q ss_pred             ccccCCChHHHHHHHHH---ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFK---KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL  215 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~---~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~  215 (420)
                      +..+..+++..+.+.++   ++.+.++|+|++|.   ++  +++++.++++......  ....|.+..|.++||++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~   77 (396)
T PRK09147          5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGE---PK--HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAW   77 (396)
T ss_pred             hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCC---CC--CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHH
Confidence            56677788888888775   34567999999996   44  3557788888776553  467899999999999999999


Q ss_pred             HcCCCCcc-ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC--CCEEEEcCCCCCCcHHH
Q psy16707        216 AYGEDCPQ-LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG--EKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       216 ~~g~~~~~-~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~--gd~VlvpdP~w~ny~~i  291 (420)
                      +...++.. ++++ +|                      +.|.|+++++.+++..+.  .|+  ||.|++|+|+|+.|..+
T Consensus        78 ~~~~~g~~~~~~~~~i----------------------~it~G~~~al~~~~~~l~--~~~~~gd~vlv~~P~y~~~~~~  133 (396)
T PRK09147         78 LERRYGLPALDPATQV----------------------LPVNGSREALFAFAQTVI--DRDGPGPLVVCPNPFYQIYEGA  133 (396)
T ss_pred             HHHHhCCCcCCccceE----------------------EECCChHHHHHHHHHHHc--CCCCCCCEEEEcCCCccchHHH
Confidence            84332222 3343 44                      569999999999887553  341  68999999999999999


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       134 ~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~  213 (396)
T PRK09147        134 ALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF  213 (396)
T ss_pred             HHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc
Confidence            9888764                                                                         


Q ss_pred             ---------------------------------------------------hhh--hhh-ccCCCchHHHHHHHHHhCCh
Q psy16707        299 ---------------------------------------------------KIL--IRA-FYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ---------------------------------------------------~~~--~r~-~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                         ..+  .+. ...+++...|.++...+.+ 
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~-  292 (396)
T PRK09147        214 DEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWND-  292 (396)
T ss_pred             CCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc-
Confidence                                                               000  011 1112333444443333322 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC------
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~------  395 (420)
                            .+.++..+++|+++|+.+.+.|++.     +....+++|+|.|+.++   .+++++|++++||.+.||      
T Consensus       293 ------~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~  361 (396)
T PRK09147        293 ------EAHVRENRALYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLARE  361 (396)
T ss_pred             ------hhHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCcccccc
Confidence                  2456677789999999999999874     23456789999998653   456688888999999774      


Q ss_pred             --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                              +  |||++. +++.++...+.|.+++
T Consensus       362 ~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~~  394 (396)
T PRK09147        362 AHGVNPGAGRVRIALVA-PLAECVEAAERIVDFC  394 (396)
T ss_pred             ccCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence                    1  899985 5666666666666654

>PRK09265 aminotransferase AlaT; Validated

Probab=99.70  E-value=3.6e-15  Score=153.00  Aligned_cols=248  Identities=14%  Similarity=0.101  Sum_probs=163.4

Q ss_pred             cchhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCC-CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQG-KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg-~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      .++++ +..+..+.+..+.+.+++.  .++++|||++|.   |+. ..++++.+.++......  ....|.+..|.++||
T Consensus         5 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~~~~~~~~~~i~~~~~~~~~--~~~~Y~~~~G~~~lr   78 (404)
T PRK09265          5 EKSSK-LENVCYDIRGPVLKEAKRLEEEGHKILKLNIGN---PAPFGFEAPDEILRDVIRNLP--TAQGYSDSKGLFSAR   78 (404)
T ss_pred             chhHH-HHhcCcchhHHHHHHHHHHHHcCCCeEEecCCC---CCcCCCCCCHHHHHHHHHHhh--cCCCCCCCCCcHHHH
Confidence            34444 3444444444444444333  456889999995   542 12355555555444332  346899999999999


Q ss_pred             HHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      +++++++.......+++++|                      +.|.|++.++.+++..+  +.| ||.|++++|+|+.|.
T Consensus        79 ~~ia~~~~~~~~~~~~~~~i----------------------~~t~G~~~~l~~~~~~~--~~~-gd~Vlv~~p~y~~~~  133 (404)
T PRK09265         79 KAIMQYYQQKGIPDVDVDDI----------------------YIGNGVSELIVMAMQAL--LNN-GDEVLVPAPDYPLWT  133 (404)
T ss_pred             HHHHHHHhccCCCCCCcccE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEeCCCCcChH
Confidence            99999985433222445555                      56999999998888655  457 999999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      ..++.+|++                                                                       
T Consensus       134 ~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~  213 (404)
T PRK09265        134 AAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKI  213 (404)
T ss_pred             HHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhc
Confidence            988877653                                                                       


Q ss_pred             --------------------------------------------hh----hh------hhccCCCchHHHHHHHHHhCCh
Q psy16707        299 --------------------------------------------KI----LI------RAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 --------------------------------------------~~----~~------r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                  ..    ++      .....+++..+|.++..+|.+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~  293 (404)
T PRK09265        214 LYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGY  293 (404)
T ss_pred             cCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCc
Confidence                                                        00    11      1112345666777777767543


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---------HHHHHHHHHhCCeEEeCC
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------ATQVEKLIKEHSVYLTKD  395 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---------~~~v~~Ll~e~~Vy~~p~  395 (420)
                          +|.+++..-..++.++|+.+.+.|++.+  + |....++.|+|.|+.++         .+++..+++++||.+.|+
T Consensus       294 ----~~~~~~~~~~~~~~~~r~~~~~~L~~~~--~-~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg  366 (404)
T PRK09265        294 ----QSINELILPGGRLYEQRDRAWELLNAIP--G-VSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQG  366 (404)
T ss_pred             ----hhHHHHHHHHHHHHHHHHHHHHHHhcCC--C-CcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECc
Confidence                2222222223467788999999998762  2 67778889999996442         356778889999999885


Q ss_pred             --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                              +  ||+++ .+.+.++...+.|.+++
T Consensus       367 ~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l  399 (404)
T PRK09265        367 TGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFL  399 (404)
T ss_pred             hhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHH
Confidence                    1  99995 66666666666666543

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.70  E-value=3.9e-15  Score=151.63  Aligned_cols=242  Identities=14%  Similarity=0.141  Sum_probs=168.2

Q ss_pred             chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      ++++ +..+.++++..+......  ..+.++|+|..|.   ++  .+.++.|.++......  ....|.|..|.++||++
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~   74 (397)
T PRK07568          3 ISKR-VLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQ---PD--IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREA   74 (397)
T ss_pred             hhhH-hhhCCcchHHHHHHHHHHHHhhCCCEEEecCCC---CC--CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHH
Confidence            4444 555556666666543321  1235689999997   33  3457888888776543  45789999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++. ..+..+++++|                      +.|.||++++.+++..+  +.| ||.|++++|+|++|..+
T Consensus        75 ia~~~~-~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~  128 (397)
T PRK07568         75 FAKYYK-KWGIDVEPDEI----------------------LITNGGSEAILFAMMAI--CDP-GDEILVPEPFYANYNGF  128 (397)
T ss_pred             HHHHHH-HhCCCCCcceE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEecCCCccHHHH
Confidence            999885 33323445555                      67999999999988755  457 99999999999999988


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       129 ~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~  208 (397)
T PRK07568        129 ATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFV  208 (397)
T ss_pred             HHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcc
Confidence            8777653                                                                         


Q ss_pred             -------------------------------------------hhhh------hhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707        299 -------------------------------------------KILI------RAFYSSPPIHGARIVQEILGDPKLKAQ  329 (420)
Q Consensus       299 -------------------------------------------~~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~  329 (420)
                                                                 ..++      .....+++...|.+++.+|+++   . 
T Consensus       209 ~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~-  284 (397)
T PRK07568        209 YDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---E-  284 (397)
T ss_pred             cCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---H-
Confidence                                                       0111      1112355677888777777643   2 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHh-----CCeEEeCC-----
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKE-----HSVYLTKD-----  395 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e-----~~Vy~~p~-----  395 (420)
                        +.++.++.+++++|+.+.+.|++.+  + +....+++|+|.|+.++    .+++++|+++     +||.+.|+     
T Consensus       285 --~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~  359 (397)
T PRK07568        285 --SYFDEVREEYKKRRDILYEELNKIP--G-VVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYA  359 (397)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHhcCC--C-ceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcC
Confidence              3455666899999999999998763  1 45566778889887653    3566788765     68999873     


Q ss_pred             ------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 ------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                            +  ||+++ .+.++++...+.|.+++
T Consensus       360 ~~~~~~~~iRls~~-~~~~~~~~~~~~l~~~l  390 (397)
T PRK07568        360 TPGLGKNEIRIAYV-LNEEDLKRAMEILKEAL  390 (397)
T ss_pred             CCCCCCCeEEEEEe-CCHHHHHHHHHHHHHHH
Confidence                  1  99997 45677666666666554

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.70  E-value=2.4e-15  Score=154.36  Aligned_cols=238  Identities=18%  Similarity=0.170  Sum_probs=167.6

Q ss_pred             CChHHHHHHHHHcc--CCCCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCC
Q psy16707        144 VPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGE  219 (420)
Q Consensus       144 ~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~  219 (420)
                      +.+|..+....++.  ++.++|+|++|.   |+  +.+++++.+.++............|.|..|.++||+++++++...
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~   89 (403)
T TIGR01265        13 VNPIRAIVDNLKVKPNPEKPIIPLSHGD---PSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSD   89 (403)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEeCCCC---CCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence            45666666666553  357999999996   54  456777888888777654333458999999999999999988543


Q ss_pred             CCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-
Q psy16707        220 DCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-  298 (420)
Q Consensus       220 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-  298 (420)
                      .+..+.+++|                      +.|.|||+|+.+++..+.  .| ||+|++++|+|+.|...++..|++ 
T Consensus        90 ~~~~~~~~~i----------------------i~t~G~t~al~~~~~~l~--~~-gd~Vlv~~p~y~~~~~~~~~~g~~~  144 (403)
T TIGR01265        90 LPGKLTADDV----------------------VLTSGCSQAIEICIEALA--NP-GANILVPRPGFPLYDTRAAFSGLEV  144 (403)
T ss_pred             cCCCCCHHHE----------------------EEecChHHHHHHHHHHhC--CC-CCEEEEeCCCchhHHHHHHHcCCEE
Confidence            3333445555                      669999999999988663  57 999999999999999888877754 


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       145 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~  224 (403)
T TIGR01265       145 RLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPM  224 (403)
T ss_pred             EEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccch
Confidence                                                                                            


Q ss_pred             ---------------------------------h-h-----hhhh------ccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707        299 ---------------------------------K-I-----LIRA------FYSSPPIHGARIVQEILGDPKLKAQWLTE  333 (420)
Q Consensus       299 ---------------------------------~-~-----~~r~------~~s~pp~~ga~iv~~IL~dp~L~~~w~~e  333 (420)
                                                       . .     +++.      ...+++...|.++..+|.+     .+...
T Consensus       225 ~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-----~~~~~  299 (403)
T TIGR01265       225 ASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILEN-----TPQEF  299 (403)
T ss_pred             hhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh-----ChHHH
Confidence                                             0 0     1111      1234566666666665542     12355


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC-------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG-------  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g-------  396 (420)
                      ++.++++++++|+.+.+.|+..+  + +....++.|+|.|+.++          .+.++.|++++||.+.||.       
T Consensus       300 ~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~  376 (403)
T TIGR01265       300 FDGKISVLKSNAELCYEELKDIP--G-LVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNW  376 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC--C-ceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCe
Confidence            66677899999999999998762  1 55556789999997552          3556888889999999862       


Q ss_pred             -cEEEcccCCCCHHHHHHHHHHH
Q psy16707        397 -RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       397 -Ris~agl~~~ni~~la~AI~~v  418 (420)
                       ||+++ ...++++.-.+.|.+.
T Consensus       377 iRis~~-~~~~~l~~~l~~l~~~  398 (403)
T TIGR01265       377 VRITIT-VPESMLEEACSRIKEF  398 (403)
T ss_pred             EEEEec-CCHHHHHHHHHHHHHH
Confidence             99998 3455555544444443

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.70  E-value=2e-15  Score=155.48  Aligned_cols=220  Identities=14%  Similarity=0.116  Sum_probs=149.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC-CceeeecccCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD-NLISIVQGISG  237 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~-~~i~~~~~~~~  237 (420)
                      ..+.|||++|.   ++. .++++.+.++......+.....|.+..|.++||+++++++-...+..+++ +.|        
T Consensus        38 ~~~~i~l~~g~---~~~-~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I--------  105 (405)
T PRK06207         38 PGRPVDFSHGD---VDA-HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADEL--------  105 (405)
T ss_pred             CCCceecCCcC---CCC-CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCE--------
Confidence            35789999996   553 23445555555554433345689999999999999999984322222344 455        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                    +.|.|+++++.+++..+  +.| ||+|++++|+|+.|..+++..|++                   
T Consensus       106 --------------~it~Ga~~al~~~~~~l--~~~-Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~  168 (405)
T PRK06207        106 --------------IITPGTQGALFLAVAAT--VAR-GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDL  168 (405)
T ss_pred             --------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCH
Confidence                          56999999999988755  457 999999999999999988877653                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       169 ~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~S  248 (405)
T PRK06207        169 DQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMG  248 (405)
T ss_pred             HHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEec
Confidence                                                                                            


Q ss_pred             ------------------------hhhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------KILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ  353 (420)
Q Consensus       299 ------------------------~~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~  353 (420)
                                              ....+. ...+++...|.++..+|.++   ..|.   +...++++++|+.+.+.|+
T Consensus       249 fSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~---~~~~~~~~~~r~~l~~~L~  322 (405)
T PRK06207        249 PSKTESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP---DGWM---KDRIARHQAIRDDLLRVLR  322 (405)
T ss_pred             chhhccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc---HHHH---HHHHHHHHHHHHHHHHHHh
Confidence                                    111122 22234556677676666542   2343   3344677888999999998


Q ss_pred             hcCCCCCCcccCCCCceEEecCCC------HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHH
Q psy16707        354 KEGSNKPWNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       354 ~~g~~~~w~~i~~q~GmF~~~~l~------~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~  417 (420)
                      +..  + +....++.|+|.|+.++      .++++.|++++||.+.||.          |||++. +.+.++.-.+.|.+
T Consensus       323 ~~~--~-~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~  398 (405)
T PRK06207        323 GVE--G-VFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQ  398 (405)
T ss_pred             cCC--C-ceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence            762  1 56667788999997553      3566888789999999851          999985 55554444444433

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.70  E-value=1.1e-15  Score=162.75  Aligned_cols=108  Identities=11%  Similarity=0.012  Sum_probs=79.0

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC-CccccCCceeeecccCCCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED-CPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~-~~~~~~~~i~~~~~~~~~~  239 (420)
                      ++|||++|.   +|  .++++.|.++.+.+..   . .|++..|++++|+++++.+.... .....+.        .   
T Consensus       101 ~~i~l~~g~---p~--~~~~~~v~e~~~~~~~---~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~--------~---  160 (527)
T PRK09275        101 DAVSYVRDQ---LG--FDADEFVYELVDGIIG---D-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK--------G---  160 (527)
T ss_pred             HHHhhcCCC---CC--CCCCHHHHHHHHHHhc---C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCC--------C---
Confidence            569999997   54  4668889888777642   2 49999999999999999775421 1000010        0   


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                              +.+|+.|.||++|+..++..|.   .+.| ||+|++|+|+|++|..+++.+|.
T Consensus       161 --------~~~I~vT~Ga~~al~~~~~aL~~~~ll~p-GD~Vlv~~P~y~~Y~~~~~l~g~  212 (527)
T PRK09275        161 --------EFDLFAVEGGTAAMCYIFDSLKENGLLKA-GDKIALMTPIFTPYLEIPELPRY  212 (527)
T ss_pred             --------cCeEEEeCCHHHHHHHHHHHHhhhhcCCC-CCEEEEeCCChHHHHHHHHHcCC
Confidence                    0134779999999998876432   3568 99999999999999999887753

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.69  E-value=2e-15  Score=157.91  Aligned_cols=239  Identities=15%  Similarity=0.245  Sum_probs=167.9

Q ss_pred             CCChHHHHHHHHHccC-----CCC-ceeecccccccCCCCCCchHHHHHHHHHHHc----------c-CCCCCCCCCCCC
Q psy16707        143 KVPSSNLLTEAFKKDT-----NVN-KINLGVGAYRDDQGKPYVLPSVKQADEIVLN----------K-NLDKEYAPIIGA  205 (420)
Q Consensus       143 ~~d~i~~l~~~~~~d~-----~~~-kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~----------~-~~~~~Y~p~~G~  205 (420)
                      ...+.+.--+++.+|+     +|+ .||||+-+      +.-..+.+.+-.+...+          . ....-|.+..|.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~ae------N~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~   97 (447)
T PLN02607         24 EDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAE------NQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGL   97 (447)
T ss_pred             CCchHHHHHHHhcCCCCCcccCCCceEEEechh------hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcch
Confidence            4566766666666653     443 89999985      23344444443332111          0 122458899999


Q ss_pred             HHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCC
Q psy16707        206 PDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTP  283 (420)
Q Consensus       206 ~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP  283 (420)
                      +.||+++++++....+  ..+++++|                      +.|.|+++++.+.+..+  +.| ||.|+||+|
T Consensus        98 ~~LR~aiA~~l~~~~~~~~~v~p~~I----------------------vit~G~t~al~~l~~~l--~~p-GD~Vlv~~P  152 (447)
T PLN02607         98 KSFRQAMASFMEQIRGGKARFDPDRI----------------------VLTAGATAANELLTFIL--ADP-GDALLVPTP  152 (447)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCHHHe----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCC
Confidence            9999999999954322  13455555                      67999999999987755  568 999999999


Q ss_pred             CCCCcHHHHhh-cCcc----------------------------------------------------------------
Q psy16707        284 TWGNHIPICKH-TGLE----------------------------------------------------------------  298 (420)
Q Consensus       284 ~w~ny~~i~~~-aG~~----------------------------------------------------------------  298 (420)
                      +|++|...++. .|++                                                                
T Consensus       153 ~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~  232 (447)
T PLN02607        153 YYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK  232 (447)
T ss_pred             CCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence            99999887763 4432                                                                


Q ss_pred             ---------------------------------------------------------------hhh---h--hhccCCCc
Q psy16707        299 ---------------------------------------------------------------KIL---I--RAFYSSPP  310 (420)
Q Consensus       299 ---------------------------------------------------------------~~~---~--r~~~s~pp  310 (420)
                                                                                     ..+   .  .+.++++|
T Consensus       233 ~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s  312 (447)
T PLN02607        233 NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVS  312 (447)
T ss_pred             CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCC
Confidence                                                                           011   1  12344567


Q ss_pred             hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH-----------H
Q psy16707        311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----------T  379 (420)
Q Consensus       311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~-----------~  379 (420)
                      ...|.+++.+|+|+++..   +.++.+++|++++|+.+.+.|++.|    +.++..+.|+|+|+.++.           +
T Consensus       313 ~~~q~~~~~~L~d~~~~~---~~l~~~r~~l~~~~~~~~~~L~~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~  385 (447)
T PLN02607        313 SQTQHLLASMLSDEEFTE---NYIRTNRERLRKRYEMIVQGLRRAG----IECLKGNAGLFCWMNLSPLLETPTREGELA  385 (447)
T ss_pred             HHHHHHHHHHhCCchhHH---HHHHHHHHHHHHHHHHHHHHHHhCC----CCcccCCeeEEEEEEchHhhcCCCchhHHH
Confidence            788999999999865433   3456677999999999999999987    456778899999986642           2


Q ss_pred             HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        380 QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       380 ~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      ..++|++++||++.||        |  ||+|+.++++.++.-.+.|.+++
T Consensus       386 l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l  435 (447)
T PLN02607        386 LWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFM  435 (447)
T ss_pred             HHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence            3468888999999996        2  99999877777776666666553

>PRK12414 putative aminotransferase; Provisional

Probab=99.69  E-value=3.5e-15  Score=152.27  Aligned_cols=211  Identities=18%  Similarity=0.264  Sum_probs=156.0

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccC-Cceeeecc
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKD-NLISIVQG  234 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~-~~i~~~~~  234 (420)
                      .++.|||+.|.   ++  +++++.+.++...+..+ ....|.|..|.++||+++++++   +|.+   +++ +.|     
T Consensus        28 ~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---~~~~~~i-----   93 (384)
T PRK12414         28 QHDALNLSQGA---PN--FAPDPALVEGVARAMRD-GHNQYAPMAGIAALREALAEKTERLYGAR---YDPASEV-----   93 (384)
T ss_pred             hCCeEEcCCCC---CC--CCCCHHHHHHHHHHHHh-CCCCcCCCCCcHHHHHHHHHHHHHHhCCC---CCCCCcE-----
Confidence            45789999997   43  45678888887776543 3578999999999999999987   3432   222 334     


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------  298 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------  298 (420)
                                       +.|.||+.++.+++..+  +.| ||.|++++|+|+.|..+++.+|++                
T Consensus        94 -----------------~it~g~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~  153 (384)
T PRK12414         94 -----------------TVIASASEGLYAAISAL--VHP-GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWD  153 (384)
T ss_pred             -----------------EEECChHHHHHHHHHHh--cCC-CCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHH
Confidence                             67999999999888644  557 999999999999999999988774                


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       154 ~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~Sf  233 (384)
T PRK12414        154 EVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSF  233 (384)
T ss_pred             HHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecc
Confidence                                                                                            


Q ss_pred             ------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16707        299 ------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQK  354 (420)
Q Consensus       299 ------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~  354 (420)
                                              ..+......+++...|.++..+|.++.   .|.    .++..|+++|+.+.+.|++
T Consensus       234 SK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~---~~~----~~~~~~~~~r~~l~~~L~~  306 (384)
T PRK12414        234 GKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA---SYL----GLGAFYQRKRDLLARELAG  306 (384)
T ss_pred             cccccCccceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh---HHH----HHHHHHHHHHHHHHHHHHh
Confidence                                    111111233456778888888787642   232    3567899999999999998


Q ss_pred             cCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCC----------C--cEEEcccCCCCHHHHHHHH
Q psy16707        355 EGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKD----------G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       355 ~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~----------g--Ris~agl~~~ni~~la~AI  415 (420)
                      .|    |...++++|||.|..+       +.+++..+++++||.+.|+          +  ||+++. +   .+.+.+++
T Consensus       307 ~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~---~~~~~~~~  378 (384)
T PRK12414        307 SR----FELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-D---DATLVEGA  378 (384)
T ss_pred             CC----CeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-C---HHHHHHHH
Confidence            76    6667788999999632       3567778889999999984          1  899983 3   56666666


Q ss_pred             HHH
Q psy16707        416 HAV  418 (420)
Q Consensus       416 ~~v  418 (420)
                      ++.
T Consensus       379 ~rl  381 (384)
T PRK12414        379 RRL  381 (384)
T ss_pred             HHH
Confidence            553

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.69  E-value=4.1e-15  Score=150.17  Aligned_cols=225  Identities=16%  Similarity=0.158  Sum_probs=157.4

Q ss_pred             ChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc-
Q psy16707        145 PSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ-  223 (420)
Q Consensus       145 d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~-  223 (420)
                      ++++......+. ...++|||+.|.   ++  .++++.+.++...+.   ....|.+..|.++||+++++++....+.. 
T Consensus         7 ~~~~~~~~~~~~-~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~   77 (357)
T TIGR03539         7 DSLAPYKAKAAS-HPDGIVDLSVGT---PV--DPVPPLIRAALAAAA---DAPGYPQTWGTPELREAIVDWLERRRGVPG   77 (357)
T ss_pred             HHHHHHHHHhhh-CCCCeEEccCCC---CC--CCCCHHHHHHHHHHH---hhCCCCcccCCHHHHHHHHHHHHHhcCCCC
Confidence            445555555543 346789999995   54  355777777776654   24689999999999999999984433322 


Q ss_pred             ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----
Q psy16707        224 LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-----  298 (420)
Q Consensus       224 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-----  298 (420)
                      +++++|                      +.|.|+++++.+++.++. ..| ||.|++++|+|+.|...++..|++     
T Consensus        78 ~~~~~I----------------------~it~G~~~~i~~~~~~l~-~~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~  133 (357)
T TIGR03539        78 LDPTAV----------------------LPVIGTKELVAWLPTLLG-LGP-GDTVVIPELAYPTYEVGALLAGATPVAAD  133 (357)
T ss_pred             CCcCeE----------------------EEccChHHHHHHHHHHHc-CCC-CCEEEECCCCcHHHHHHHHhcCCEEeccC
Confidence            455655                      569999999998776542 357 999999999999999988888764     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       134 ~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~  213 (357)
T TIGR03539       134 DPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVH  213 (357)
T ss_pred             ChhhcCccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEe
Confidence                                                                                            


Q ss_pred             --------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 --------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL  352 (420)
Q Consensus       299 --------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L  352 (420)
                                                ....+....+++..+|.++...|.+    .   +.++.++.+++++|+.+.+.|
T Consensus       214 S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~---~~~~~~~~~~~~~~~~~~~~L  286 (357)
T TIGR03539       214 SLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD----D---GHVAEQKARYAARRAQLKPAL  286 (357)
T ss_pred             ccccccCCCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC----H---HHHHHHHHHHHHHHHHHHHHH
Confidence                                      0111122234556666666665654    1   334556789999999999999


Q ss_pred             HhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHH
Q psy16707        353 QKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       353 ~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~  417 (420)
                      ++.|    +...+++.|+|.|..+  +...+...++++||.+.|+.          |||++. +   -+.+.++|++
T Consensus       287 ~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~---~~~i~~~~~~  355 (357)
T TIGR03539       287 EKAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-T---DERIAAAVAR  355 (357)
T ss_pred             HHcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-C---HHHHHHHHHh
Confidence            9876    5567788999999754  44444444579999998851          999985 3   3566666543

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.69  E-value=6.8e-15  Score=150.29  Aligned_cols=128  Identities=15%  Similarity=0.078  Sum_probs=94.8

Q ss_pred             ccccCCChHHHHHHHHHc---cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKK---DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL  215 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~---d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~  215 (420)
                      +..+..+++..+.+.+.+   ..+.+.|||++|.   ++  ..+++.++++......  ....|.|..|.++||++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~   76 (393)
T TIGR03538         4 LSRLQPYPFEKLAALLAGVTPPASKPPIALSIGE---PK--HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARW   76 (393)
T ss_pred             hhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCC---CC--CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHH
Confidence            344566777777766642   3467899999997   43  3457888888777543  467899999999999999999


Q ss_pred             HcCCCCcc--ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCE--EEEcCCCCCCcHH
Q psy16707        216 AYGEDCPQ--LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKV--IYVPTPTWGNHIP  290 (420)
Q Consensus       216 ~~g~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~--VlvpdP~w~ny~~  290 (420)
                      +...++..  ++++ .|                      +.|.|+++++.+++..+  +.| ||.  |++|+|+|+.|..
T Consensus        77 ~~~~~~~~~~~~~~~~i----------------------~it~Ga~~al~~~~~~l--~~~-gd~~~vlv~~P~y~~~~~  131 (393)
T TIGR03538        77 LERRFDLPTGVDPERHV----------------------LPVNGTREALFAFAQAV--INP-GQAPLVVMPNPFYQIYEG  131 (393)
T ss_pred             HHHhhCCcccCCCCceE----------------------EECCCcHHHHHHHHHHH--cCC-CCcceEEecCCCCcchHH
Confidence            84432211  3332 34                      56999999999988755  457 875  9999999999999


Q ss_pred             HHhhcCcc
Q psy16707        291 ICKHTGLE  298 (420)
Q Consensus       291 i~~~aG~~  298 (420)
                      +++..|++
T Consensus       132 ~~~~~g~~  139 (393)
T TIGR03538       132 AALLAGAE  139 (393)
T ss_pred             HHHhcCCe
Confidence            88877764

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.69  E-value=2.5e-15  Score=157.75  Aligned_cols=230  Identities=17%  Similarity=0.190  Sum_probs=175.3

Q ss_pred             cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc--CC-CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707        157 DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NL-DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQ  233 (420)
Q Consensus       157 d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~-~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~  233 (420)
                      ...+..|+++.|.   ++....+....+++...+...  .. ...|.+..|.+++|+++++++.-..+...++++|    
T Consensus        86 ~~~~~~i~f~~g~---p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~I----  158 (459)
T COG1167          86 EDDPSVIDFAGGL---PDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQI----  158 (459)
T ss_pred             cCCCceecCCCCC---CCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeE----
Confidence            4458899999997   556667788888887777643  22 4588899999999999999997222333455556    


Q ss_pred             ccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------
Q psy16707        234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------  298 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------  298 (420)
                                        +.|.|.+.|+.+++.++.  .| ||+|++.+|||+....+++..|++               
T Consensus       159 ------------------iiT~G~q~al~l~~~~l~--~p-Gd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~  217 (459)
T COG1167         159 ------------------VITSGAQQALDLLLRLLL--DP-GDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEA  217 (459)
T ss_pred             ------------------EEeCCHHHHHHHHHHHhC--CC-CCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHH
Confidence                              569999999999998764  48 999999999999999999999986               


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       218 le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSF  297 (459)
T COG1167         218 LEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSF  297 (459)
T ss_pred             HHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeee
Confidence                                                                                            


Q ss_pred             -----------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707        299 -----------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE  355 (420)
Q Consensus       299 -----------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~  355 (420)
                                             ..........++.+.|.+++.-|.+    +.|.++++.|+..|+++|+.+.+.|++.
T Consensus       298 SK~l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~----G~~~~hl~~lR~~y~~rr~~l~~~L~~~  373 (459)
T COG1167         298 SKTLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLS----GHYDRHLRRLRREYARRRDALLEALAEY  373 (459)
T ss_pred             hhhcccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                                   1112333345577777777776653    5788999999999999999999999998


Q ss_pred             CCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeC-C------------CcEEEcccCCCCHHHHHHHHHHH
Q psy16707        356 GSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTK-D------------GRISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       356 g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p-~------------gRis~agl~~~ni~~la~AI~~v  418 (420)
                      +.+ -.....+.+|||.|+.++    +..+-....+.||.+.| |            -|+|++..+++.++.-.+.+.++
T Consensus       374 ~~~-~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~  452 (459)
T COG1167         374 LPE-LATWTRPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAAL  452 (459)
T ss_pred             CCC-CeeeecCCceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            642 233566778999998554    34444444678888887 3            19999999998888777777666


Q ss_pred             h
Q psy16707        419 T  419 (420)
Q Consensus       419 v  419 (420)
                      +
T Consensus       453 ~  453 (459)
T COG1167         453 L  453 (459)
T ss_pred             H
Confidence            5

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.68  E-value=4.3e-15  Score=152.46  Aligned_cols=225  Identities=16%  Similarity=0.170  Sum_probs=158.8

Q ss_pred             HHHHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC----CCCCCCCCCCCHHHHHHHHHHHcCCCCcc
Q psy16707        149 LLTEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN----LDKEYAPIIGAPDFGKLAAQLAYGEDCPQ  223 (420)
Q Consensus       149 ~l~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~----~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~  223 (420)
                      .+.+.+++ +++.++|+|+.|.   +  .+++++.|.++......+.    ...+|.|..|.++||+++++++++..   
T Consensus        21 ~~~~~~~~~~~~~~~i~l~~~~---~--~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~---   92 (402)
T TIGR03542        21 RRVNEFRKKHPSADIIRLGIGD---T--TQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGR---   92 (402)
T ss_pred             HHHHHHHhccCCCCeEEcCCCC---C--CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcC---
Confidence            34444443 3567899999996   3  3456777777776655431    23579999999999999999876532   


Q ss_pred             ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc------
Q psy16707        224 LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL------  297 (420)
Q Consensus       224 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~------  297 (420)
                      +++++|                      +.|.|++.++.+...+   +.| ||.|++++|+|+.|..+++..|+      
T Consensus        93 ~~~d~I----------------------~it~Ga~~al~~l~~l---~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~  146 (402)
T TIGR03542        93 IDPEEI----------------------FISDGAKCDVFRLQSL---FGS-DNTVAVQDPVYPAYVDSNVMAGRAGVLDD  146 (402)
T ss_pred             CCHHHE----------------------EECCCcHHHHHHHHHh---cCC-CCEEEEeCCCCcchHHHHHHcCCcccccc
Confidence            455655                      5699999999876543   347 89999999999999999998887      


Q ss_pred             -----c--------------------------------------------------------------------------
Q psy16707        298 -----E--------------------------------------------------------------------------  298 (420)
Q Consensus       298 -----~--------------------------------------------------------------------------  298 (420)
                           +                                                                          
T Consensus       147 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~  226 (402)
T TIGR03542       147 DGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPH  226 (402)
T ss_pred             ccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCc
Confidence                 4                                                                          


Q ss_pred             -----------------------------------hhhh---------------hhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 -----------------------------------KILI---------------RAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 -----------------------------------~~~~---------------r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                         ..++               ...+.+++...|.++..+|.+..   
T Consensus       227 ~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~---  303 (402)
T TIGR03542       227 SIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG---  303 (402)
T ss_pred             chhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc---
Confidence                                               1111               12233456667776666676532   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC--------
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD--------  395 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~--------  395 (420)
                       | +.++.++..++++|+.+.+.|++.|    +....+.+|+|.|+.++     .++++.|++++||.+.|+        
T Consensus       304 -~-~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~  377 (402)
T TIGR03542       304 -L-QPILEAISYYMENARILRKALEAAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGE  377 (402)
T ss_pred             -h-hHHHHHHHHHHHHHHHHHHHHHhcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence             2 2234455788999999999999876    55555668999997653     356788888999999985        


Q ss_pred             C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        396 G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       396 g--Ris~agl~~~ni~~la~AI~~  417 (420)
                      +  ||++++ ++++++...+.|.+
T Consensus       378 ~~iRis~~~-~~~~l~~~l~~l~~  400 (402)
T TIGR03542       378 GFVRFSAFG-KRENIVEACERIKE  400 (402)
T ss_pred             CEEEEEecC-CHHHHHHHHHHHHh
Confidence            1  999875 66665555555554

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK08363 alanine aminotransferase; Validated

Probab=99.68  E-value=5.6e-15  Score=151.17  Aligned_cols=221  Identities=12%  Similarity=0.111  Sum_probs=155.5

Q ss_pred             CCCCceeecccccccCC-CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        158 TNVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      .+.++|||+.|.   |. ...++++.+.++......+ ....|.|..|.++||+++++++...++..+++++|       
T Consensus        28 ~~~~~i~l~~g~---p~~~~~~p~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i-------   96 (398)
T PRK08363         28 KGIKVIRLNIGD---PVKFDFQPPEHMKEAYCRAIKE-GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDV-------   96 (398)
T ss_pred             cCCCeEEEeCCC---CCcCCCCCCHHHHHHHHHHHHc-CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhE-------
Confidence            346899999996   53 1245677888887776543 34679999999999999999985443333556655       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|++.++.+++..+  +.| ||.|++++|+|+.|...++..|+.                  
T Consensus        97 ---------------~it~G~~~al~~~~~~~--~~~-gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~  158 (398)
T PRK08363         97 ---------------RVTAAVTEALQLIFGAL--LDP-GDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDD  158 (398)
T ss_pred             ---------------EEeCCHHHHHHHHHHHh--CCC-CCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHH
Confidence                           56999999999988755  557 999999999999999888877653                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       159 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~  238 (398)
T PRK08363        159 IRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKV  238 (398)
T ss_pred             HHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhc
Confidence                                                                                            


Q ss_pred             ------------h--------hhhh-------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------K--------ILIR-------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDN  351 (420)
Q Consensus       299 ------------~--------~~~r-------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~  351 (420)
                                  .        .+..       ..+ +++...+.++..+|.+      +.+.+++++++++++|+.+.+.
T Consensus       239 ~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~-~~s~~~q~~~~~~l~~------~~~~l~~~~~~~~~~~~~l~~~  311 (398)
T PRK08363        239 YFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRL-CPNTPAQFAAIAGLTG------PMDYLEEYMKKLKERRDYIYKR  311 (398)
T ss_pred             cCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccc-cCChHHHHHHHHHHhC------ChHHHHHHHHHHHHHHHHHHHH
Confidence                        0        0000       012 3455566666665643      1244556678999999999999


Q ss_pred             HHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHH
Q psy16707        352 LQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKA  414 (420)
Q Consensus       352 L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~A  414 (420)
                      |++.+  + |....+++|+|.|..+       +.+++..+++++||.+.|+.          |||++ .+++.++...+.
T Consensus       312 L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~  387 (398)
T PRK08363        312 LNEIP--G-ISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-PPVEILEEAMDR  387 (398)
T ss_pred             HhcCC--C-CEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHH
Confidence            98762  2 6666778888988532       34667788899999998852          99997 455555555555


Q ss_pred             HHHH
Q psy16707        415 IHAV  418 (420)
Q Consensus       415 I~~v  418 (420)
                      |.++
T Consensus       388 l~~~  391 (398)
T PRK08363        388 FEEF  391 (398)
T ss_pred             HHHH
Confidence            5443

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.68  E-value=6.8e-15  Score=155.87  Aligned_cols=242  Identities=16%  Similarity=0.165  Sum_probs=168.9

Q ss_pred             ccCCChHHHHHHHHHccC-----CC-CceeecccccccCCCC--CCchHHHHHHHHHH-H------ccCCCCCCCCCCCC
Q psy16707        141 SVKVPSSNLLTEAFKKDT-----NV-NKINLGVGAYRDDQGK--PYVLPSVKQADEIV-L------NKNLDKEYAPIIGA  205 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~d~-----~~-~kInL~iG~y~d~dg~--~~~~~~V~~a~~~~-~------~~~~~~~Y~p~~G~  205 (420)
                      +....+.|.--+++.+++     ++ .+|+|++-+    +..  ....+-|+++.... .      .-.....|.+..|.
T Consensus        21 ~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aE----N~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~   96 (496)
T PLN02376         21 HGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAE----NQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGL   96 (496)
T ss_pred             cCCCCchHHHHHHHhCCCCCcccCCCceEEeecch----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCc
Confidence            445667777777887764     34 589999874    221  12234444432210 0      00233569999999


Q ss_pred             HHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCC
Q psy16707        206 PDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTP  283 (420)
Q Consensus       206 ~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP  283 (420)
                      ++||+++++++....+  ..+++++|                      +.|.|+++|+.+++..|  +.| ||.|++|+|
T Consensus        97 ~~LR~aiA~~l~~~~g~~v~v~pe~I----------------------vit~Ga~~al~~l~~~l--~~p-GD~Vlv~~P  151 (496)
T PLN02376         97 KKFRQAIAHFMGKARGGKVTFDPERV----------------------VMSGGATGANETIMFCL--ADP-GDVFLIPSP  151 (496)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCChhhE----------------------EEccchHHHHHHHHHHh--CCC-CCEEEECCC
Confidence            9999999999853322  22455655                      67999999999998765  458 999999999


Q ss_pred             CCCCcHHHHh-hcCcc----------------------------------------------------------------
Q psy16707        284 TWGNHIPICK-HTGLE----------------------------------------------------------------  298 (420)
Q Consensus       284 ~w~ny~~i~~-~aG~~----------------------------------------------------------------  298 (420)
                      +|+.|...++ .+|++                                                                
T Consensus       152 ~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~  231 (496)
T PLN02376        152 YYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK  231 (496)
T ss_pred             CccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence            9999998776 35654                                                                


Q ss_pred             -------------------------------------------------------------------hhh--hhhccCCC
Q psy16707        299 -------------------------------------------------------------------KIL--IRAFYSSP  309 (420)
Q Consensus       299 -------------------------------------------------------------------~~~--~r~~~s~p  309 (420)
                                                                                         ...  ....++..
T Consensus       232 ~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~v  311 (496)
T PLN02376        232 NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLV  311 (496)
T ss_pred             CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCC
Confidence                                                                               000  02223445


Q ss_pred             chHHHHHHHHHhCChhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----------
Q psy16707        310 PIHGARIVQEILGDPKLKAQW-LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----------  377 (420)
Q Consensus       310 p~~ga~iv~~IL~dp~L~~~w-~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----------  377 (420)
                      +...|.+++.+|+|+    +| .+.++.++++++++|+.+.+.|++.|    +.++.++.|+|.|+.++           
T Consensus       312 s~~~Q~a~~~~L~d~----~~~~~~l~~~r~~l~~r~~~l~~~L~~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~  383 (496)
T PLN02376        312 SSQTQLMLASMLSDD----QFVDNFLMESSRRLGIRHKVFTTGIKKAD----IACLTSNAGLFAWMDLRHLLRDRNSFES  383 (496)
T ss_pred             CHHHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCceEEEEEEchhhhccCCchhH
Confidence            777888888888874    56 45678888999999999999999877    56677899999997553           


Q ss_pred             -HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        378 -ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 -~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                       .+.++.|++++||.+.||        |  ||+|+..+.+.++.-.+.|.+++
T Consensus       384 e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l  436 (496)
T PLN02376        384 EIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFV  436 (496)
T ss_pred             HHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence             234567888899999996        2  99999766666555555555443

>KOG0257|consensus

Probab=99.67  E-value=7.9e-15  Score=148.84  Aligned_cols=129  Identities=15%  Similarity=0.049  Sum_probs=96.8

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ....+++..-.+++.+.+-..+++  ||.|.     .+.++|+.|.+|...+..+...++|++..|+|++++++++.+-.
T Consensus        12 l~~~~~~vw~e~~~la~e~~~~~~--LgqGf-----p~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se   84 (420)
T KOG0257|consen   12 LSTSKPYVWTEINRLAAEHKVPNP--LGQGF-----PDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSE   84 (420)
T ss_pred             ccccCCcHHHHHHHHHHhcCCCCc--ccCCC-----CCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHH
Confidence            344445555566655544333332  99996     45588999999988888776789999999999999999998844


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      ..+..        ++|.++             |.+|.|+.+++..+..  ..+++ ||+|+|.+|.|++|.+.++++|.+
T Consensus        85 ~~~~~--------~~~~~e-------------VlVT~GA~~ai~~~~~--~l~~~-GDeVii~eP~fd~Y~~~~~maG~t  140 (420)
T KOG0257|consen   85 FYGGL--------LDPDDE-------------VLVTAGANEAISSALL--GLLNP-GDEVIVFEPFFDCYIPQVVMAGGT  140 (420)
T ss_pred             Hhccc--------cCCccc-------------EEEecCchHHHHHHHH--HHcCC-CCEEEEecCcchhhhhHHhhcCCc
Confidence            22211        233232             5779999999997765  34678 999999999999999999999986

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.66  E-value=1.1e-14  Score=149.70  Aligned_cols=236  Identities=11%  Similarity=0.016  Sum_probs=158.3

Q ss_pred             HHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC----CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCc
Q psy16707        153 AFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN----LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNL  228 (420)
Q Consensus       153 ~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~----~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~  228 (420)
                      ..+...++++|||++|.   ++..+++.+.++++...+.+++    ....|.+..|.++||+++++++....+..+++++
T Consensus        23 ~~~~~~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~   99 (416)
T PRK09440         23 LNDGLRTPGAIMLGGGN---PAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQN   99 (416)
T ss_pred             HHHHhcCCCceeccCCC---CCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhh
Confidence            33334457789999996   5543445567888877765432    2358999999999999999999433322355666


Q ss_pred             eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc---CCCCCEEEE-cCCCCCCcHHHHhhc---------
Q psy16707        229 ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF---FPGEKVIYV-PTPTWGNHIPICKHT---------  295 (420)
Q Consensus       229 i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~---~p~gd~Vlv-pdP~w~ny~~i~~~a---------  295 (420)
                      |                      +.|.|++.++.+++..+..-   .| ||.|++ ++|+||.|.......         
T Consensus       100 I----------------------~it~Ga~~al~~~~~~l~~~~~~~~-gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~  156 (416)
T PRK09440        100 I----------------------ALTNGSQSAFFYLFNLFAGRRADGS-LKKILFPLAPEYIGYADAGLEEDLFVSYRPN  156 (416)
T ss_pred             E----------------------EEccChHHHHHHHHHHHhccccCCC-CCeEEEecCCCchhhHHHhhccCceeecccc
Confidence            6                      56999999999998766431   25 899999 699999988632211         


Q ss_pred             -----------Ccc------------------------------------------------------------------
Q psy16707        296 -----------GLE------------------------------------------------------------------  298 (420)
Q Consensus       296 -----------G~~------------------------------------------------------------------  298 (420)
                                 +..                                                                  
T Consensus       157 ~~~~~~~~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~  236 (416)
T PRK09440        157 IELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL  236 (416)
T ss_pred             cccccccccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCcc
Confidence                       110                                                                  


Q ss_pred             ---------------------------------hhhhhhcc-CCCchHHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHH
Q psy16707        299 ---------------------------------KILIRAFY-SSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIIS  343 (420)
Q Consensus       299 ---------------------------------~~~~r~~~-s~pp~~ga~iv~~IL~dp~L~~~w~~el~~-m~~r~~~  343 (420)
                                                       ....+..+ .+++..+|.++..+|++.+    |.+.++. ++..|++
T Consensus       237 ~~~~vI~~~SfSK~~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~  312 (416)
T PRK09440        237 WNPNIILCMSLSKLGLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGD----LLRLSETVIRPFYRQ  312 (416)
T ss_pred             ccCCeEEEecccccCCCcceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccch----HHHHHHHHHHHHHHH
Confidence                                             11112222 3568889999988888754    4444443 4678888


Q ss_pred             HHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CHHHHHHHHHhCCeEEeCC-----------------CcEEEc
Q psy16707        344 MRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVEKLIKEHSVYLTKD-----------------GRISMA  401 (420)
Q Consensus       344 ~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p~-----------------gRis~a  401 (420)
                      +|+.+.+.|++.-....+....+++|+|.|+.+     +++++...++++||.+.|+                 -|||++
T Consensus       313 r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~  392 (416)
T PRK09440        313 KVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV  392 (416)
T ss_pred             HHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec
Confidence            888888888764111124445678899999743     3444433447899999873                 199998


Q ss_pred             ccCCCCHHHHHHHHHHHh
Q psy16707        402 GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       402 gl~~~ni~~la~AI~~vv  419 (420)
                      + +.++++...++|.+++
T Consensus       393 ~-~~~~l~~~i~~l~~~~  409 (416)
T PRK09440        393 Q-DDEEIEKGIAILAEEV  409 (416)
T ss_pred             C-CHHHHHHHHHHHHHHH
Confidence            5 6777777777776654

>PLN02397 aspartate transaminase

Probab=99.66  E-value=8e-16  Score=159.50  Aligned_cols=125  Identities=60%  Similarity=0.987  Sum_probs=118.8

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      ++++++.+.+..++++|.+++.++..+|+++++.++|.++++.|+++++..|..|++.|++.+.++.|+++..|.|||.+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~  373 (423)
T PLN02397        294 VKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSF  373 (423)
T ss_pred             HHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEe
Confidence            34567778888999999999999999999999999999999999999999999999999998877789999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +.++.+++++|.+++|||++.+||||++|++.+|+++++++|++|
T Consensus       374 ~~l~~~~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~~i~~~  418 (423)
T PLN02397        374 TGLNKEQVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAV  418 (423)
T ss_pred             cCCCHHHHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998

>PRK05839 hypothetical protein; Provisional

Probab=99.66  E-value=2e-14  Score=146.31  Aligned_cols=225  Identities=12%  Similarity=0.104  Sum_probs=152.8

Q ss_pred             HHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC
Q psy16707        148 NLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN  227 (420)
Q Consensus       148 ~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~  227 (420)
                      ..+....++..+.++|||++|.   ++  +++++.++++......  ....|.+..|.++||+++++++-..++..++++
T Consensus        12 ~~~~~~~~~~~~~~~i~l~~~~---p~--~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~   84 (374)
T PRK05839         12 RELLKEITPNKEYKGLDLTIGE---PQ--FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKEN   84 (374)
T ss_pred             HHHHHHhhhcCCCCeEEcCCCC---CC--CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc
Confidence            3444444443455999999996   43  3456888887766542  467899999999999999999844333235566


Q ss_pred             ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------
Q psy16707        228 LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------  298 (420)
Q Consensus       228 ~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------  298 (420)
                      +|                      +.|.|+++++.+++.++....+ ||.|++|+|+|+.|...++..|++         
T Consensus        85 ~I----------------------~it~G~~~al~~~~~~~~~~~~-gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~  141 (374)
T PRK05839         85 EL----------------------IPTFGTREVLFNFPQFVLFDKQ-NPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKE  141 (374)
T ss_pred             eE----------------------EEecCcHHHHHHHHHHHhcCCC-CCEEEECCCCchhhHHHHHhcCCEEEEeecccc
Confidence            66                      5699999999888765421125 899999999999999999988875         


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       142 ~~~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~  221 (374)
T PRK05839        142 NDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESF  221 (374)
T ss_pred             cCCcCCcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCcccc
Confidence                                                                                            


Q ss_pred             ------------------------------hhh--hhhc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------------KIL--IRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMR  345 (420)
Q Consensus       299 ------------------------------~~~--~r~~-~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R  345 (420)
                                                    ..+  .+.. -.+.|...|.++...|.+    .   +.++.++++++++|
T Consensus       222 ~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~---~~~~~~~~~~~~~~  294 (374)
T PRK05839        222 KNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD----D---EHAEFFRNIYAKNL  294 (374)
T ss_pred             CcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc----c---hHHHHHHHHHHHHH
Confidence                                          000  0111 112344445444444433    2   34455668899999


Q ss_pred             HHHHHHHHhcCCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCC----------C--cEEEcccCCCCHHHH
Q psy16707        346 QSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKD----------G--RISMAGVTSKNVGYL  411 (420)
Q Consensus       346 ~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~----------g--Ris~agl~~~ni~~l  411 (420)
                      +.+.+.|   |    +.  .+++|+|.|+.++  .+++++|++++||.+.|+          +  ||+++. +++.+...
T Consensus       295 ~~~~~~l---~----~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~  364 (374)
T PRK05839        295 KLAREIL---G----IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKA  364 (374)
T ss_pred             HHHHHhc---C----CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHH
Confidence            8887765   4    22  5688999998764  567788888899999984          2  999974 56666666


Q ss_pred             HHHHHHHh
Q psy16707        412 AKAIHAVT  419 (420)
Q Consensus       412 a~AI~~vv  419 (420)
                      .+.|.+++
T Consensus       365 l~~l~~~l  372 (374)
T PRK05839        365 LEIIKTYL  372 (374)
T ss_pred             HHHHHHHh
Confidence            66666543

>PLN02368 alanine transaminase

Probab=99.62  E-value=1.6e-14  Score=149.46  Aligned_cols=195  Identities=15%  Similarity=0.132  Sum_probs=142.9

Q ss_pred             CCCCceeecccccccCCCC------C----------------------CchHHHHHHHHHHHcc-CCCCCCCCCCCCHHH
Q psy16707        158 TNVNKINLGVGAYRDDQGK------P----------------------YVLPSVKQADEIVLNK-NLDKEYAPIIGAPDF  208 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~------~----------------------~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~f  208 (420)
                      .+.++|+|++|.   ||..      +                      .+++.+++|...+..+ ...+.|++..|+++|
T Consensus        36 ~g~~vi~l~iG~---Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~L  112 (407)
T PLN02368         36 EGKKIIFTNVGN---PHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGV  112 (407)
T ss_pred             HhhhhhcccCCC---hhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHH
Confidence            456999999996   6632      1                      3678888887765322 246789999999999


Q ss_pred             HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      |+++++++...++..+++++|                      +.|.|++.++.+++..+. ..| ||.|++|+|+|++|
T Consensus       113 R~aia~~~~~~~g~~~~~~~I----------------------~it~Ga~~al~~~~~~l~-~~p-Gd~Vli~~P~Y~~y  168 (407)
T PLN02368        113 RKEVAEFIERRDGYPSDPELI----------------------FLTDGASKGVMQILNAVI-RGE-KDGVLVPVPQYPLY  168 (407)
T ss_pred             HHHHHHHHHHhcCCCCChhhE----------------------EEcccHHHHHHHHHHHHc-CCC-CCEEEEeCCCCccH
Confidence            999999995443333455655                      669999999998876542 247 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ..+++.+|++                                                                      
T Consensus       169 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~  248 (407)
T PLN02368        169 SATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG  248 (407)
T ss_pred             HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence            9988877654                                                                      


Q ss_pred             ------------------------------------------------------------------h--hhhhhccCCCc
Q psy16707        299 ------------------------------------------------------------------K--ILIRAFYSSPP  310 (420)
Q Consensus       299 ------------------------------------------------------------------~--~~~r~~~s~pp  310 (420)
                                                                                        .  ........+++
T Consensus       249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~  328 (407)
T PLN02368        249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPN  328 (407)
T ss_pred             EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCC
Confidence                                                                              0  00011122456


Q ss_pred             hHHHHHHHHHhCChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEe--cCCCHHHHHH
Q psy16707        311 IHGARIVQEILGDPKL----KAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCY--TGLNATQVEK  383 (420)
Q Consensus       311 ~~ga~iv~~IL~dp~L----~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~--~~l~~~~v~~  383 (420)
                      ..+|.++..+|++++.    ...|.++++.|++.|++||+.+++.|+++ |    +...++++|||.|  +.++...+++
T Consensus       329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g----~~~~~P~Gafy~~~~i~lp~~~~~~  404 (407)
T PLN02368        329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKN----VVCNFTEGAMYSFPQIKLPPKAIEA  404 (407)
T ss_pred             cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----eEeCCCCeeeEeccCCCCCHHHHHH
Confidence            6677777777765531    13467888889999999999999999987 5    6667788889989  4778877764

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.62  E-value=6.5e-14  Score=140.95  Aligned_cols=208  Identities=13%  Similarity=0.151  Sum_probs=146.4

Q ss_pred             ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCC-ceeeecccCCCCc
Q psy16707        162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDN-LISIVQGISGTGS  240 (420)
Q Consensus       162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~-~i~~~~~~~~~~~  240 (420)
                      ++|++.|.   ++  +++++.+.++..+...  ....|.+..|.++||+++++++...++..++++ +|           
T Consensus         2 ~~~~~~g~---p~--~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I-----------   63 (350)
T TIGR03537         2 LFDFGTGD---PK--EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQV-----------   63 (350)
T ss_pred             eEeccCCC---CC--CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcE-----------
Confidence            58899995   43  5667888888877653  357899999999999999999854333334444 55           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCC---CEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE---KVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g---d~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                 +.|.|+++++.+++..+  +.| |   |+|++|+|+|+.|...++..|++                   
T Consensus        64 -----------iit~Gs~~ai~~~~~~~--~~~-g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  129 (350)
T TIGR03537        64 -----------LPSAGSKEAIFHFPLVF--IDP-EEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKV  129 (350)
T ss_pred             -----------EEcCChHHHHHHHHHHH--cCC-CCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHH
Confidence                       56999999999988755  446 5   79999999999999999988775                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       130 ~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g  209 (350)
T TIGR03537       130 EKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSG  209 (350)
T ss_pred             HHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccC
Confidence                                                                                            


Q ss_pred             ------------------hhhhhhccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 ------------------KILIRAFYS-SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 ------------------~~~~r~~~s-~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                        ....+..++ ++|...+.++...|.+    .+|.   +..+.+++++|+.+.+.|++.|   
T Consensus       210 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~---~~~r~~l~~~~~~~~~~l~~~g---  279 (350)
T TIGR03537       210 MTGYRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSD----DNHV---LERRKIFKRKRDLFIEFFNKVG---  279 (350)
T ss_pred             CccccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCC----cHHH---HHHHHHHHHHHHHHHHHHHHCC---
Confidence                              111122222 3344566655555553    2343   4456899999999999999876   


Q ss_pred             CCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        360 PWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       360 ~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~  417 (420)
                       +...++++|+|.|+.+    +. +.++.|+ ++||++.|+        +  |||++ .+.   +.+.++|+.
T Consensus       280 -~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~---~~~~~~l~~  346 (350)
T TIGR03537       280 -LEYLYPDATFYLWVKVPSGIDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALV-PTL---EECEEALRL  346 (350)
T ss_pred             -CcccCCCeEEEEEEECCCCCCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEec-CCH---HHHHHHHHH
Confidence             5666778899998744    33 4556775 589999874        1  99987 343   455555543

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.60  E-value=1.1e-13  Score=140.05  Aligned_cols=214  Identities=13%  Similarity=0.072  Sum_probs=151.2

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..|||++|.   +  ..++++.+.++......+  .....|. ..|.++||+++++++....+..+++++|         
T Consensus        27 ~~i~l~~~~---~--~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I---------   91 (368)
T PRK03317         27 VPVRLNTNE---N--PYPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENV---------   91 (368)
T ss_pred             ceeEecCCC---C--CCCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhE---------
Confidence            579999996   2  246777788777665432  1346784 5699999999999985543333556655         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...++..|.+                    
T Consensus        92 -------------~it~G~~~~l~~~~~~~--~~~-gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~  155 (368)
T PRK03317         92 -------------WAANGSNEILQQLLQAF--GGP-GRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAA  155 (368)
T ss_pred             -------------EECCCHHHHHHHHHHHh--cCC-CCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHH
Confidence                         56999999999998765  457 999999999999999988877664                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       156 ~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl  235 (368)
T PRK03317        156 IAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG  235 (368)
T ss_pred             HhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh
Confidence                                                                                            


Q ss_pred             --------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707        299 --------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI  364 (420)
Q Consensus       299 --------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i  364 (420)
                                    ....+..| +++..++.++..+|.+.   ..|    .+.+++++++|+.+.+.|++.|    +...
T Consensus       236 RiG~~~~~~~~~~~l~~~~~~~-~~s~~~~~a~~~~l~~~---~~~----~~~~~~~~~~~~~l~~~L~~~g----~~~~  303 (368)
T PRK03317        236 RLGYLAAAPAVVDALRLVRLPY-HLSAVTQAAARAALRHA---DEL----LASVAALRAERDRVVAWLRELG----LRVA  303 (368)
T ss_pred             hhhhhhCCHHHHHHHHhcCCCC-CCCHHHHHHHHHHhhCH---HHH----HHHHHHHHHHHHHHHHHHHHCC----CEeC
Confidence                          11112233 34566777666667542   223    2334567888999999999877    5556


Q ss_pred             CCCCceEEecCC-CHHHHHHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        365 TDQIGMFCYTGL-NATQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       365 ~~q~GmF~~~~l-~~~~v~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      .++.|+|.|..+ +.+.+...+.++||++.+.+     ||+++  +.+.++.+.+++.+++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~  362 (368)
T PRK03317        304 PSDANFVLFGRFADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVL  362 (368)
T ss_pred             CCCCcEEEEeccCCHHHHHHHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence            677787777544 34444334467899998754     99987  4577899999998875

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.60  E-value=1.3e-13  Score=141.29  Aligned_cols=215  Identities=18%  Similarity=0.210  Sum_probs=152.6

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      .++++||+.|.   ++  +++++.|.++...+.++  .....|.+..|.+++|+++++++...+...+++++|       
T Consensus        32 ~~~~~~l~~g~---p~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i-------   99 (394)
T PRK06836         32 ADNVFDFSLGN---PS--VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHI-------   99 (394)
T ss_pred             CCCeEEecCcC---CC--CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcE-------
Confidence            35679999995   43  45678888887776543  125789999999999999999985544444556666       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|+++++.+++..+  +.| ||.|++++|+|+.|..+++..|++                  
T Consensus       100 ---------------~~t~G~~~al~~~~~~l--~~~-gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l  161 (394)
T PRK06836        100 ---------------VMTCGAAGALNVALKAI--LNP-GDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDAL  161 (394)
T ss_pred             ---------------EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHH
Confidence                           56999999999888755  457 999999999999999998877664                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       162 ~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S  241 (394)
T PRK06836        162 EAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYS  241 (394)
T ss_pred             HhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEec
Confidence                                                                                            


Q ss_pred             ------------------hhh------h-------hh-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------KIL------I-------RA-FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ  346 (420)
Q Consensus       299 ------------------~~~------~-------r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~  346 (420)
                                        ..+      .       +. .+.+++...|.+++.++.++.           -+.+++++|+
T Consensus       242 ~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~  310 (394)
T PRK06836        242 FSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRD  310 (394)
T ss_pred             chhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHH
Confidence                              000      0       00 112344555555555555421           1356888999


Q ss_pred             HHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHH
Q psy16707        347 SLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI  415 (420)
                      .+.+.|++.|    |....+++|||.|+.+   +...+...++++||.+.|+      +  ||+++ .+++.++...+.|
T Consensus       311 ~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~~~i~~l  385 (394)
T PRK06836        311 LLYDGLTELG----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC-VDTETIERSLPAF  385 (394)
T ss_pred             HHHHHHHhCC----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec-CCHHHHHHHHHHH
Confidence            9999999876    7777788899999754   3444434457899999997      2  99998 6777766655555


Q ss_pred             HHHh
Q psy16707        416 HAVT  419 (420)
Q Consensus       416 ~~vv  419 (420)
                      .+++
T Consensus       386 ~~~l  389 (394)
T PRK06836        386 EKLA  389 (394)
T ss_pred             HHHH
Confidence            5543

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.58  E-value=1.3e-13  Score=138.20  Aligned_cols=207  Identities=16%  Similarity=0.207  Sum_probs=150.5

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .++|||+.|.   +  ..++++.++++......+ ....|.+. |.+++|+++++++ +     +++++|          
T Consensus        24 ~~~i~l~~~~---~--~~~~~~~~~~a~~~~~~~-~~~~y~~~-~~~~lr~aia~~~-~-----~~~~~I----------   80 (353)
T PRK05387         24 AKLIKLNTNE---N--PYPPSPKVLEAIRAALGD-DLRLYPDP-NADALRQAIAAYY-G-----LDPEQV----------   80 (353)
T ss_pred             cceeeccCCC---C--CCCCCHHHHHHHHHHhhh-hhhcCCCC-cHHHHHHHHHHHh-C-----CCHHHE----------
Confidence            4689999997   2  244577888888766543 35678654 7799999999986 3     234445          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|++.++.+++..+  +.| ||.|++|+|+|++|...++..|++                     
T Consensus        81 ------------~it~G~~~al~~~~~~l--~~~-gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~  145 (353)
T PRK05387         81 ------------FVGNGSDEVLAHAFLAF--FNH-DRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLRPN  145 (353)
T ss_pred             ------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHhcC
Confidence                        67999999999998755  457 999999999999999999888875                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       146 ~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~  225 (353)
T PRK05387        146 GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH  225 (353)
T ss_pred             CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC
Confidence                                                                                            


Q ss_pred             ----hhh--hhhcc--CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCce
Q psy16707        299 ----KIL--IRAFY--SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM  370 (420)
Q Consensus       299 ----~~~--~r~~~--s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~Gm  370 (420)
                          ..+  .+..+  .+++..++.++..+|.+    .+|   +++++++++++|+.+.+.|++.|    |.. .++.|+
T Consensus       226 ~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~-~~~~~~  293 (353)
T PRK05387        226 PELIEALNRVKNSFNSYPLDRLAQAGAIAAIED----EAY---FEETRAKVIATRERLVEELEALG----FEV-LPSKAN  293 (353)
T ss_pred             HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----CeE-CCCcCc
Confidence                111  12211  23466777777776754    234   34566889999999999999886    543 456788


Q ss_pred             EEecCC---CHH-HHHHHHHhCCeEEeCC--------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        371 FCYTGL---NAT-QVEKLIKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       371 F~~~~l---~~~-~v~~Ll~e~~Vy~~p~--------gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      |.|+.+   +++ +++.| .++||++.+-        -||+++  +.+.++++.++|++++
T Consensus       294 ~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~  351 (353)
T PRK05387        294 FVFARHPSHDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEIL  351 (353)
T ss_pred             EEEEECCCCCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHh
Confidence            888754   344 45666 6889999431        199997  5688999999998875

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.55  E-value=2.8e-13  Score=144.08  Aligned_cols=105  Identities=10%  Similarity=-0.012  Sum_probs=73.3

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCC-Cc-cccCCceeeecccCCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGED-CP-QLKDNLISIVQGISGT  238 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~-~~-~~~~~~i~~~~~~~~~  238 (420)
                      +.|||++|.   ++.  ++++.|.++.+.+..    ..|++..|.++++++++..++... .. ...++.          
T Consensus        95 ~~i~l~~g~---p~~--~~~~~~~~~~~~~~~----~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~----------  155 (521)
T TIGR03801        95 DIISYVIDQ---LGF--DPDAFLYEMCDGIIG----DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGE----------  155 (521)
T ss_pred             HHHhhcCCC---CCC--CCCHHHHHHHHHhhc----CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc----------
Confidence            468999997   544  456778777766542    259888888888888886664432 10 011110          


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                                .+|+.|.||++|+..++..|.   .+.| ||+|++++|+|++|..+++..
T Consensus       156 ----------~~V~it~Gat~al~~~~~~l~~~~ll~p-GD~Vlv~~P~y~~y~~~~~l~  204 (521)
T TIGR03801       156 ----------FDLFAVEGGTAAMCYIFDSLKANELLKK-GDKIALMTPIFTPYLEIPELP  204 (521)
T ss_pred             ----------CeEEEeCCHHHHHHHHHHHHhHhhcCCC-CCEEEEeCCCcHHHHHHHHHh
Confidence                      024779999999998776431   3567 999999999999999886654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK09105 putative aminotransferase; Provisional

Probab=99.55  E-value=5.3e-13  Score=136.00  Aligned_cols=207  Identities=15%  Similarity=0.175  Sum_probs=149.3

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      .++.|+|+.|.     ...++++.|.++......+  ...|.+. +.++||+++++++ |.     ++++|         
T Consensus        42 ~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~-~v-----~~e~I---------   98 (370)
T PRK09105         42 AEGAVFLNANE-----CPLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE-GL-----PADHV---------   98 (370)
T ss_pred             CCCcEEecCCC-----CCCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh-Cc-----ChhhE---------
Confidence            36789999996     2245666777776654432  2458765 4999999999965 42     34555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...++..|++                    
T Consensus        99 -------------~it~Gs~~ai~~~~~~l--~~~-gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  162 (370)
T PRK09105         99 -------------MAYAGSSEPLNYAVLAF--TSP-TAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA  162 (370)
T ss_pred             -------------EEcCChHHHHHHHHHHH--cCC-CCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc
Confidence                         56999999999998765  447 999999999999999999988875                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       163 ~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRi  242 (370)
T PRK09105        163 DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRL  242 (370)
T ss_pred             CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccce
Confidence                                                                                            


Q ss_pred             ----------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707        299 ----------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI  368 (420)
Q Consensus       299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~  368 (420)
                                ..+.+..+++++..++.++..+|.++    +|.   +.++++++++|+.+.+.|++.|    |...+++.
T Consensus       243 G~~v~~~~~i~~l~~~~~~~~~~~~~~aa~~~L~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~  311 (370)
T PRK09105        243 GLAAARPDLLAKLARFGHNPLPVPAAAAGLASLRDP----KLV---PQRRAENAAVREDTIAWLKKKG----YKCTPSQA  311 (370)
T ss_pred             eeeecCHHHHHHHHhcCCCCcCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CCcCCCCC
Confidence                      12222244557778888777777653    454   4445789999999999999887    66666666


Q ss_pred             ceEEecCC--CH-HHHHHHHHhCCeEEeC------C-CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        369 GMFCYTGL--NA-TQVEKLIKEHSVYLTK------D-GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       369 GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p------~-gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      ++| +..+  +. ++++.|+ ++||++..      + -||+++  ++++++++.+++++++
T Consensus       312 ~f~-~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~  368 (370)
T PRK09105        312 NCF-MVDVKRPAKAVADAMA-KQGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVM  368 (370)
T ss_pred             cEE-EEeCCCCHHHHHHHHH-HCCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence            655 4433  44 4556775 56999831      1 299988  4677999999998875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.55  E-value=5.3e-13  Score=134.35  Aligned_cols=211  Identities=15%  Similarity=0.112  Sum_probs=151.1

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..++|+|++|.   +  .+++++.++++..........+.|.+ .|.++||+++++++ |.+    .++.|         
T Consensus        25 ~~~~i~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~-~~~----~~~~I---------   84 (356)
T PRK04870         25 ATGMVKLDAME---N--PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM-GVP----AGADV---------   84 (356)
T ss_pred             CCCceeCcCCC---C--CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh-CcC----CCCcE---------
Confidence            35899999996   2  35678888888776543334578877 68899999999987 432    11234         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||+|++++|+|+.|..+++..|++                    
T Consensus        85 -------------~~t~G~~~~i~~~~~~~--~~~-gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~  148 (356)
T PRK04870         85 -------------LLGNGSDELIQLLALAC--AKP-GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAA  148 (356)
T ss_pred             -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHH
Confidence                         56888899999888755  457 999999999999999999988875                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       149 ~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~GlRiG~  228 (356)
T PRK04870        149 IAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSKLGLAGLRLGY  228 (356)
T ss_pred             hhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchhhhhHHHhhhh
Confidence                                                                                            


Q ss_pred             --------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707        299 --------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI  368 (420)
Q Consensus       299 --------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~  368 (420)
                              ..+  .+..| +.+..++.++..+|++       .+.++.++++++++|+.+.+.|+++.  + |. +.++.
T Consensus       229 ~i~~~~~i~~~~~~~~~~-~~~~~~q~~a~~~l~~-------~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~-~~~~~  296 (356)
T PRK04870        229 LAGHPAWIAELDKVRPPY-NVNVLTQATALFALEH-------VDVLDAQAAQLRAERTRLAAALAALP--G-VT-VFPSA  296 (356)
T ss_pred             hhCCHHHHHHHHHccCCC-cCCHHHHHHHHHHHhC-------HHHHHHHHHHHHHHHHHHHHHHHhCC--C-cE-ECCCC
Confidence                    000  11122 3455566655555543       13356677889999999999998862  2 53 34677


Q ss_pred             ceEEecCCC-HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        369 GMFCYTGLN-ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       369 GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |+|.|+.++ .+.+..+++++||.+.|+.          |||++  +.+..+.|.+|+.+++
T Consensus       297 ~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~  356 (356)
T PRK04870        297 ANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL  356 (356)
T ss_pred             CeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence            889987764 4555555689999998741          99998  5688999999998863

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.54  E-value=1e-12  Score=132.42  Aligned_cols=204  Identities=15%  Similarity=0.174  Sum_probs=144.4

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..++|||++|.   ++  ..+++.+.++......  ..+.|+ ..|.++||+++++++ +     +++++|         
T Consensus        29 ~~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~--~~~~Y~-~~~~~~lr~~ia~~~-~-----~~~~~I---------   85 (357)
T PRK14809         29 PDDLVKLSSNE---NP--HGPSPAAVEAIREAAE--RVHSYP-KASHADLTAALADRW-D-----VSPEQV---------   85 (357)
T ss_pred             ccceeEecCCC---CC--CCCCHHHHHHHHHHHh--hhhcCC-CCCHHHHHHHHHHHh-C-----CCcceE---------
Confidence            45799999996   22  3445566666655443  246785 479999999999987 3     335555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||.|++++|+|+.|....+..|+.                    
T Consensus        86 -------------~it~G~~~al~~~~~~~--~~~-gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~  149 (357)
T PRK14809         86 -------------WLANGGDGALDYLARAM--LDP-GDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVL  149 (357)
T ss_pred             -------------EECCCHHHHHHHHHHHh--cCC-CCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHH
Confidence                         56999999999988755  457 999999999999888777665543                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       150 ~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl  229 (357)
T PRK14809        150 DAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGL  229 (357)
T ss_pred             HhhcCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcch
Confidence                                                                                            


Q ss_pred             ------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707        299 ------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI  364 (420)
Q Consensus       299 ------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i  364 (420)
                                  ..+  .+.. .+++..++.++..+|.+    .+|   ++.+++.++++|+.+.+.|+..+    |   
T Consensus       230 RiG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~r~~l~~~L~~~~----~---  294 (357)
T PRK14809        230 RLGYAVVPEEWADAYARVNTP-FAASELACRAGLAALDD----DEH---VERTVETARWAREYIREELDAPT----W---  294 (357)
T ss_pred             hheeeecCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhCC----HHH---HHHHHHHHHHHHHHHHHHhcCcc----C---
Confidence                        111  1222 34566777777777765    244   44455788899999999886532    2   


Q ss_pred             CCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        365 TDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       365 ~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                       ++.|+|.|+.++  .++++.| +++||.+.|+.        ||+++  +.+.++...++|.++++
T Consensus       295 -~~~g~f~~~~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        295 -ESAGNFVLAEVGDASAVAEAA-QERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA  356 (357)
T ss_pred             -CCCCCEEEEECCCHHHHHHHH-HHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence             478999998763  3455555 78899999862        99986  45788888888877653

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.53  E-value=9e-13  Score=133.17  Aligned_cols=206  Identities=16%  Similarity=0.121  Sum_probs=150.0

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||++|.    ++ ..+++.|.++......  ....|.+. |.++||+++++++ +     +++++|          
T Consensus        22 ~~~i~l~~~~----n~-~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~aia~~~-~-----v~~~~I----------   77 (360)
T PRK07392         22 DAILDFSASI----NP-LGPPESVIAAIQSALS--ALRHYPDP-DYRELRLALAQHH-Q-----LPPEWI----------   77 (360)
T ss_pred             ccEEEeCCcC----CC-CCCCHHHHHHHHHHHH--HhhcCCCc-CHHHHHHHHHHHh-C-----cChhhE----------
Confidence            4679999996    22 4566777777665543  25679875 5689999999988 3     335555          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|+++++.+++..+   .+ ||.|++++|+|+.|...++..|++                     
T Consensus        78 ------------~it~G~~~~i~~~~~~l---~~-g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~  141 (360)
T PRK07392         78 ------------LPGNGAAELLTWAGREL---AQ-LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQT  141 (360)
T ss_pred             ------------EECCCHHHHHHHHHHHh---CC-CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHH
Confidence                        56999999999887644   36 789999999999999999887664                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       142 ~~~~~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~  221 (360)
T PRK07392        142 LPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLP  221 (360)
T ss_pred             HHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCC
Confidence                                                                                            


Q ss_pred             --------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q psy16707        299 --------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN  362 (420)
Q Consensus       299 --------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~  362 (420)
                                    ..+  .+.. .+++...|.++..+|.+    .+|.+++.   ++++++|+.+.+.|++++.   |.
T Consensus       222 GlRiG~~v~~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~----~~~~~~~~---~~~~~~r~~l~~~L~~~~~---~~  290 (360)
T PRK07392        222 GLRLGYAIAHPDRLQRWQQWRDP-WPVNGLAAAAAIAALAD----RDFQQQTW---AWLPPAREALFQGLASLPG---LT  290 (360)
T ss_pred             chheeeeeCCHHHHHHHHhhCCC-CCCCHHHHHHHHHHhcc----HHHHHHHH---HHHHHHHHHHHHHHHhCCC---cE
Confidence                          111  1222 34577888888888875    35665554   6788999999999987621   55


Q ss_pred             ccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        363 HITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       363 ~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      . .++.|+|.|+.++   .+.+++|++++||.+.|+        +  ||+++.  .+..+.|.+++.+++
T Consensus       291 ~-~~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~  357 (360)
T PRK07392        291 P-LPSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAIL  357 (360)
T ss_pred             E-CCCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence            4 3478999997653   345578888999999885        1  999884  344679999988865

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.52  E-value=1.3e-12  Score=133.08  Aligned_cols=206  Identities=12%  Similarity=0.064  Sum_probs=149.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..++|+|+.|+     ...++++.|.++......+  ...| |..|.++||+++++++ |     +++++|         
T Consensus        28 ~~~~i~l~~ne-----n~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~-~-----~~~~~I---------   84 (366)
T PRK01533         28 DHSFVKLASNE-----NPFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL-H-----VKMEQV---------   84 (366)
T ss_pred             CCceEEeCCCC-----CCCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh-C-----CCcceE---------
Confidence            45789999996     2245677777776654332  2335 7789999999999986 3     235555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...++..|++                    
T Consensus        85 -------------~vt~Gs~e~i~~~~~~l--~~~-gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~  148 (366)
T PRK01533         85 -------------LCGSGLDEVIQIISRAV--LKA-GDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVV  148 (366)
T ss_pred             -------------EECCCHHHHHHHHHHHh--cCC-CCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHh
Confidence                         56999999999988755  447 999999999999999999988875                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       149 ~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G  228 (366)
T PRK01533        149 DNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLAS  228 (366)
T ss_pred             CcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChH
Confidence                                                                                            


Q ss_pred             ---------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707        299 ---------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH  363 (420)
Q Consensus       299 ---------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~  363 (420)
                                     ....+.. .+++..+|.++..+|.+    .+|.+++.   +.++++|+.+.+.|++.|    +.+
T Consensus       229 lRiG~~i~~~~~~~~l~~~~~~-~~~~~~~q~aa~~~l~~----~~~~~~~~---~~~~~~r~~~~~~l~~~g----~~~  296 (366)
T PRK01533        229 FRVGYAVGHEELIEKLNVVRLP-FNVSSLAQKAATIAFGD----DEFIEEIV---RVNTEGLRQYESFCKENE----IPF  296 (366)
T ss_pred             HHHhHHhCCHHHHHHHHHhcCC-CCcCHHHHHHHHHHhCC----HHHHHHHH---HHHHHHHHHHHHHHHhCC----Ccc
Confidence                           1112333 35688888888888875    56766665   556666777777787777    444


Q ss_pred             cCCCCceEEecCC-CHHHH-HHHHHhCCeEEeCC---CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        364 ITDQIGMFCYTGL-NATQV-EKLIKEHSVYLTKD---GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       364 i~~q~GmF~~~~l-~~~~v-~~Ll~e~~Vy~~p~---gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      .+ +.|.|.|+.+ +.+.+ +.| .++||.+.+-   -||+++  +.+..+.|.+|+.+++
T Consensus       297 ~~-~~~nf~~~~~~~~~~~~~~l-~~~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~  353 (366)
T PRK01533        297 YQ-SQTNFIFLPVENGGEIYEAC-AHAGFIIRPFPNGVRITVG--TREQNEGVISVLQQHF  353 (366)
T ss_pred             CC-CcCcEEEEeCCCHHHHHHHH-HHCCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHH
Confidence            44 4688998876 34444 555 5899999652   399987  4578889999998875

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.52  E-value=1.5e-12  Score=131.11  Aligned_cols=203  Identities=15%  Similarity=0.143  Sum_probs=150.3

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      ++|||+.|.+  +   ..+++.|++|.....+   ...|.|..|.++||+++++++ +.     ++++|           
T Consensus        30 ~~i~l~~n~~--~---~~~~~~v~~a~~~~~~---~~~~~p~~g~~~lr~~ia~~~-~~-----~~~~i-----------   84 (359)
T PRK03158         30 KIVKLASNEN--P---YGPSPKVKEAIAAHLD---ELALYPDGYAPELRTKVAKHL-GV-----DEEQL-----------   84 (359)
T ss_pred             ceEEecCCCC--C---CCCCHHHHHHHHHHHH---HhhcCCCCcHHHHHHHHHHHh-CC-----CHHHE-----------
Confidence            7899999972  2   3356778888776543   246778889999999999987 32     24455           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------------  298 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------------  298 (420)
                                 +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...+...|.+                      
T Consensus        85 -----------~~t~G~~~~l~~~~~~~--~~~-gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~  150 (359)
T PRK03158         85 -----------LFGAGLDEVIQMISRAL--LNP-GTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDE  150 (359)
T ss_pred             -----------EECCCHHHHHHHHHHHH--hCC-CCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCC
Confidence                       56999999999887655  347 899999999999999888877764                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       151 ~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlR  230 (359)
T PRK03158        151 QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALR  230 (359)
T ss_pred             CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchh
Confidence                                                                                            


Q ss_pred             -------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC
Q psy16707        299 -------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT  365 (420)
Q Consensus       299 -------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~  365 (420)
                                   ....+..| +++..++.++..+|++    .+|.+++   ++.++++|+.+.+.|++.|    +... 
T Consensus       231 iG~~v~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~----~~~~~~~---~~~~~~~~~~~~~~l~~~~----~~~~-  297 (359)
T PRK03158        231 VGYGIASEELIEKLNIARPPF-NTTRIAQYAAIAALED----QAFLKEC---VEKNAEGLEQYYAFCKEYG----LFYY-  297 (359)
T ss_pred             hehhcCCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcC----HHHHHHH---HHHHHHHHHHHHHHHHHCC----CeeC-
Confidence                         11113333 4577788888887865    3565444   4678888999999998876    4443 


Q ss_pred             CCCceEEecCC--CH-HHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707        366 DQIGMFCYTGL--NA-TQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       366 ~q~GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~v  418 (420)
                      +..|+|.|+.+  ++ +.++.|+ ++||.+.|+      +  ||+++  +.+.++.+.++|+++
T Consensus       298 ~~~g~~i~~~~~~~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~  358 (359)
T PRK03158        298 PSQTNFIFVDTGRDANELFEALL-KKGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL  358 (359)
T ss_pred             CCcCcEEEEECCCCHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence            56789999755  33 4556665 689999995      1  99987  678899999999886

>PRK07908 hypothetical protein; Provisional

Probab=99.51  E-value=4.7e-12  Score=127.29  Aligned_cols=209  Identities=13%  Similarity=0.145  Sum_probs=151.3

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      ..++.+||++|.   +  .+.+++.|+++......+  ...|.+..|.+++|+++++++ |     +++++|        
T Consensus        20 ~~~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~-~-----~~~~~I--------   78 (349)
T PRK07908         20 AGPGLLDFAVNV---R--HDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH-G-----RTPDEV--------   78 (349)
T ss_pred             CCCCeEEecCCC---C--CCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh-C-----cChhhE--------
Confidence            357899999996   2  245677777777765532  467999999999999999986 3     235555        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                    +.|.|++.++.+++.    +.|  +.+++++|+|+.|...++..|++                   
T Consensus        79 --------------~it~Ga~~al~~~~~----l~~--~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~~  138 (349)
T PRK07908         79 --------------LLLAGAAEGFALLAR----LRP--RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVPD  138 (349)
T ss_pred             --------------EECCCHHHHHHHHHh----cCC--CeEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhcc
Confidence                          569999999998876    335  45678999999999988887765                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       139 ~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~  218 (349)
T PRK07908        139 DADLVVIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALG  218 (349)
T ss_pred             CCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeec
Confidence                                                                                            


Q ss_pred             -----hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE
Q psy16707        299 -----KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF  371 (420)
Q Consensus       299 -----~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF  371 (420)
                           ..+  .+..|+ .....+.++..++.+     ...++++.++++++++|+.+.+.|++.|    |....++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~~  288 (349)
T PRK07908        219 APDVLARLTRGRAHWP-VGTLQLEAIAACCAP-----RAVAEAAADAARLAADRAEMVAGLRAVG----ARVVDPAAAPF  288 (349)
T ss_pred             CHHHHHHHHhcCCCCC-ccHHHHHHHHHHhcc-----cchHHHHHHHHHHHHHHHHHHHHHHhCC----cEeccCCCceE
Confidence                 101  011222 122233333333332     1224567778999999999999999875    66677789999


Q ss_pred             EecCCC-HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        372 CYTGLN-ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       372 ~~~~l~-~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      .|+.++ .+++..+++++||.+.|+        +  |||++  +.+.++++.+++++++
T Consensus       289 ~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~  345 (349)
T PRK07908        289 VLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEIL  345 (349)
T ss_pred             EEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHH
Confidence            998775 456666668999999874        1  99995  6789999999999875

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.49  E-value=3.4e-12  Score=130.46  Aligned_cols=205  Identities=16%  Similarity=0.169  Sum_probs=147.1

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..+.|||+.|.  ++   ..+++.|.++.....   ..+.|+ ..|.++||+++++++ |     +++++|         
T Consensus        51 ~~~~i~l~~n~--~p---~~~~~~v~~a~~~~~---~~~~Yp-~~~~~~lr~~ia~~~-~-----~~~~~I---------  106 (380)
T PLN03026         51 PEDIVKLDANE--NP---YGPPPEVLEALGNMK---FPYVYP-DPESRRLRAALAEDS-G-----LESENI---------  106 (380)
T ss_pred             ccceEEccCCC--CC---CCCCHHHHHHHHhhH---hhccCC-CCCHHHHHHHHHHHh-C-----cChhhE---------
Confidence            46889999996  12   334555777654421   235575 458999999999976 3     234555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...++..|++                    
T Consensus       107 -------------~~t~Ga~~~i~~~~~~~--~~~-gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  170 (380)
T PLN03026        107 -------------LVGCGADELIDLLMRCV--LDP-GDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEA  170 (380)
T ss_pred             -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHH
Confidence                         56999999999888654  457 999999999999999888877764                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       171 ~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiG  250 (380)
T PLN03026        171 VETHKPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVG  250 (380)
T ss_pred             HhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccce
Confidence                                                                                            


Q ss_pred             ---------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC
Q psy16707        299 ---------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ  367 (420)
Q Consensus       299 ---------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q  367 (420)
                               .  ...+..| +.+..++.++..+|.+    .+|   ++.++..++++|+.+.+.|++++    +..+.++
T Consensus       251 y~~~~~~~i~~l~~~~~~~-~~~~~~q~aa~~aL~~----~~~---~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~  318 (380)
T PLN03026        251 YGAFPLSIIEYLWRAKQPY-NVSVAAEVAACAALSN----PKY---LEDVKNALVEERERLFGLLKEVP----FLEPYPS  318 (380)
T ss_pred             eeecCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhhC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----CCeECCC
Confidence                     1  1112333 4577778777777765    245   44566889999999999999876    3334677


Q ss_pred             CceEEecCCC----H-HHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707        368 IGMFCYTGLN----A-TQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       368 ~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~v  418 (420)
                      .|+|.|+.++    . ++.++|+ ++||.+.++      +  ||+++  +.+..+.+.++++++
T Consensus       319 ~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~  379 (380)
T PLN03026        319 DANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL  379 (380)
T ss_pred             CCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence            8999987543    3 4556665 899999764      1  99988  456789999999764

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.46  E-value=8e-12  Score=122.83  Aligned_cols=215  Identities=20%  Similarity=0.227  Sum_probs=156.0

Q ss_pred             eeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccc
Q psy16707        163 INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLR  242 (420)
Q Consensus       163 InL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~  242 (420)
                      |||+.|.|     .+.+.+.+.++............|.+..|..++++++++++....+....+..              
T Consensus         1 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~--------------   61 (350)
T cd00609           1 IDLSIGEP-----DFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEE--------------   61 (350)
T ss_pred             CCCCCCCC-----CCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcce--------------
Confidence            68899975     23444444444443222345678999999999999999998554321111222              


Q ss_pred             cccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------------
Q psy16707        243 VGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------------  298 (420)
Q Consensus       243 ~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------------  298 (420)
                              ++.+.|||+++..++..+.  .+ ||+|++++|+|++|..+++..|++                        
T Consensus        62 --------~~~~~~~t~a~~~~~~~~~--~~-g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  130 (350)
T cd00609          62 --------IVVTNGAQEALSLLLRALL--NP-GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT  130 (350)
T ss_pred             --------EEEecCcHHHHHHHHHHhC--CC-CCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC
Confidence                    3679999999998887663  36 899999999999999999888764                        


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       131 ~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g  210 (350)
T cd00609         131 PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG  210 (350)
T ss_pred             ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc
Confidence                                                                                            


Q ss_pred             -----------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16707        299 -----------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW  361 (420)
Q Consensus       299 -----------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w  361 (420)
                                       ....+..+++++.+++..+..+|..-.      ++.+.+++++.++++.+.+.|++.+..   
T Consensus       211 ~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~---  281 (350)
T cd00609         211 LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELGPL---  281 (350)
T ss_pred             cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHhcCCc---
Confidence                             111233446778888887776665421      456667789999999999999988732   


Q ss_pred             cccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC------C----cEEEcccCCCCHHHHHHHHHH
Q psy16707        362 NHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       362 ~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~------g----Ris~agl~~~ni~~la~AI~~  417 (420)
                      ....+..|+|.|+.++    .+++.++++++||++.++      +    ||+++.. .++++++.++|++
T Consensus       282 ~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~~  350 (350)
T cd00609         282 VVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE  350 (350)
T ss_pred             cccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhhC
Confidence            2246678999987554    456788889999999875      2    9999977 8899999998863

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.46  E-value=6.4e-13  Score=136.63  Aligned_cols=123  Identities=56%  Similarity=0.942  Sum_probs=115.1

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      ++++.+.+..|+++|.....++..+|+++++.++|.++++.|+++++..|..+++.|++.+.++.|.++..|.|||.+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~  357 (404)
T PTZ00376        278 SQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTG  357 (404)
T ss_pred             HHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecC
Confidence            45555678899999999999999999999999999999999999999999999999999877777988889999999999


Q ss_pred             CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ++.+++++|.++++|++++.|||++++++++++++++++|+++
T Consensus       358 ~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~  400 (404)
T PTZ00376        358 LTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDV  400 (404)
T ss_pred             CCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.46  E-value=9.1e-12  Score=126.74  Aligned_cols=215  Identities=16%  Similarity=0.180  Sum_probs=143.0

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCC-CCCCCCCCCCHHHHHHHHHHHcCCC--CccccCCceeeecccC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL-DKEYAPIIGAPDFGKLAAQLAYGED--CPQLKDNLISIVQGIS  236 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~-~~~Y~p~~G~~~fr~a~~~~~~g~~--~~~~~~~~i~~~~~~~  236 (420)
                      +..++|+.|.   +  ..++++.+.++......+.. ...|. ..|.++||+++++++....  +..+++++|       
T Consensus        28 ~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I-------   94 (374)
T PRK02610         28 IQLDRLDTNE---F--PYDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANI-------   94 (374)
T ss_pred             cceeEecCCC---C--CCCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHE-------
Confidence            4679999997   3  24567778777766544321 35784 5799999999999885332  122455555       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC-EEEEcCCCCCCcHHHHhhcCcc-----------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK-VIYVPTPTWGNHIPICKHTGLE-----------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd-~VlvpdP~w~ny~~i~~~aG~~-----------------  298 (420)
                                     +.|.|+++++..++..+  +.+ || .|++++|+|+.|..+++..|++                 
T Consensus        95 ---------------~it~Ga~~al~~~~~~~--~~~-g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~  156 (374)
T PRK02610         95 ---------------SVGNGSDELIRSLLIAT--CLG-GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAA  156 (374)
T ss_pred             ---------------EEcCChHHHHHHHHHHH--cCC-CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHH
Confidence                           66999999998665433  446 65 8999999999999998877654                 


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       157 l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~  236 (374)
T PRK02610        157 AQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAF  236 (374)
T ss_pred             HHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhc
Confidence                                                                                            


Q ss_pred             -----------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 -----------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 -----------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                       ..+  .+.. .+.+...|.++..+|.+.   +.|.+.++   ..+++ |+.+.+.|++++  +
T Consensus       237 g~~GlRiG~~v~~~~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~~---~~~~~~~~---~~~~~-r~~l~~~L~~~~--~  306 (374)
T PRK02610        237 RLAAHRVGYAIGHPELIAVLEKVRLP-YNLPSFSQLAAQLALEHR---QELLAAIP---EILQE-RDRLYQALQELP--Q  306 (374)
T ss_pred             cCcccceeeeecCHHHHHHHHHhcCC-CCCCHHHHHHHHHHhcCH---HHHHHHHH---HHHHH-HHHHHHHHHhCC--C
Confidence                             111  1222 345777888777777653   34444333   44444 777888898762  2


Q ss_pred             CCcccCCCCceEEecCC----CHHHHHHHHHhCCeEEeCC-C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        360 PWNHITDQIGMFCYTGL----NATQVEKLIKEHSVYLTKD-G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       360 ~w~~i~~q~GmF~~~~l----~~~~v~~Ll~e~~Vy~~p~-g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                       |. +.++.|+|.|+.+    +.+.+...++++||.+.+. +  ||+++.  .+.++...++|.+++
T Consensus       307 -~~-~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l  369 (374)
T PRK02610        307 -LR-VWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAAL  369 (374)
T ss_pred             -cE-eCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHH
Confidence             54 3578899999754    3344433347899999763 2  999884  344577777776654

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.45  E-value=7.2e-13  Score=135.65  Aligned_cols=123  Identities=44%  Similarity=0.758  Sum_probs=114.7

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .+++...|..|++||.....+++.+|+++++...|.+.++.|++++++.|..|++.|++.+.++.|.+...|.|||.++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~  352 (396)
T PRK09257        273 SQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSG  352 (396)
T ss_pred             HHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecC
Confidence            45556678899999999999999999999999999999999999999999999999999876667888889999999999


Q ss_pred             CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      |+.+++++|.++++||+.++|||+++++++++|++.++.|++|
T Consensus       353 l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~  395 (396)
T PRK09257        353 LTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAV  395 (396)
T ss_pred             CCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999876

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.45  E-value=7.3e-12  Score=127.34  Aligned_cols=206  Identities=15%  Similarity=0.119  Sum_probs=148.9

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...++|++|+   +  ...+++.+.+|......  ....|.+. +.++||+++++++ +     ++++.|         
T Consensus        31 ~~~~~~l~~~~---~--~~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~~ia~~~-~-----~~~~~I---------   87 (369)
T PRK08153         31 RPFRARIGANE---S--GFGPSPSVIAAMREAAA--EIWKYGDP-ENHDLRHALAAHH-G-----VAPENI---------   87 (369)
T ss_pred             CcceeEecCCC---C--CCCCCHHHHHHHHHHHH--HhhcCCCC-ccHHHHHHHHHHh-C-----CCHHHE---------
Confidence            34457999996   2  24666777777665432  24678876 5899999999986 3     234445         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.++..++  +.| ||.|++++|+||.|...++..|++                    
T Consensus        88 -------------~it~G~~~~l~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~  151 (369)
T PRK08153         88 -------------MVGEGIDGLLGLIVRLY--VEP-GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAA  151 (369)
T ss_pred             -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHh
Confidence                         66999999999988755  447 999999999999999888877764                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       152 ~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlR  231 (369)
T PRK08153        152 RRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGAR  231 (369)
T ss_pred             cccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchh
Confidence                                                                                            


Q ss_pred             -------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC
Q psy16707        299 -------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT  365 (420)
Q Consensus       299 -------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~  365 (420)
                                   ....+..+ +++...+.++..+|.+    .+|.+   .++++++++|+.+.+.|++.|    |. ..
T Consensus       232 iG~~v~~~~~~~~l~~~~~~~-~~s~~~q~~~~~~l~~----~~~~~---~~~~~~~~~r~~~~~~L~~~g----~~-~~  298 (369)
T PRK08153        232 VGYAIGAPGTIKAFDKVRNHF-GMNRIAQAAALAALKD----QAYLA---EVVGKIAAARDRIAAIARANG----LT-PL  298 (369)
T ss_pred             eeeeecCHHHHHHHHHhhcCC-CCCHHHHHHHHHHhcC----HHHHH---HHHHHHHHHHHHHHHHHHHCC----Cc-cC
Confidence                         11123333 4677788888887865    35644   455889999999999999877    44 33


Q ss_pred             CCCceEEecCCC-----HHHH-HHHHHhCCeEE-eCC-----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        366 DQIGMFCYTGLN-----ATQV-EKLIKEHSVYL-TKD-----G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       366 ~q~GmF~~~~l~-----~~~v-~~Ll~e~~Vy~-~p~-----g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +..|+|.|+.++     .+++ ++| .++||++ .|+     +  ||+++  +++.++++.+++.+++
T Consensus       299 p~~~~f~~~~~~~~~~~a~~l~~~l-~~~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~  363 (369)
T PRK08153        299 PSATNFVAIDCGRDGAFARAVLDGL-IARDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEAL  363 (369)
T ss_pred             CCcCcEEEEECCCCcccHHHHHHHH-HHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence            578899987552     2233 444 3689999 453     1  89987  6899999999999875

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.45  E-value=9.8e-12  Score=125.01  Aligned_cols=206  Identities=12%  Similarity=0.118  Sum_probs=143.2

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +.++|+|++|+   +  ..++++.+.++..........+.|.+. |.++||+++++++....   +++++|         
T Consensus        18 ~~~~i~l~~~~---~--~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i---------   79 (335)
T PRK14808         18 KRDRTYLALNE---N--PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNV---------   79 (335)
T ss_pred             CCceeEecCCC---C--CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceE---------
Confidence            35889999996   3  245666676665554332223447655 99999999999884322   345555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|++.++.+++..+       |.|++++|+|+.|..+++.+|++                    
T Consensus        80 -------------~it~Ga~~~i~~~~~~~-------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~  139 (335)
T PRK14808         80 -------------SVGNGADEIIYVMMLMF-------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEG  139 (335)
T ss_pred             -------------EEcCCHHHHHHHHHHHh-------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCC
Confidence                         56999999999987633       57999999999999999999886                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       140 ~~i~i~nP~NPTG~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~  219 (335)
T PRK14808        140 DVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEK  219 (335)
T ss_pred             CEEEEeCCCCCCCCCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHH
Confidence                                                                                            


Q ss_pred             --hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec
Q psy16707        299 --KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT  374 (420)
Q Consensus       299 --~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~  374 (420)
                        ..+  .+. ..+++..++.++..+|++.    +|.   ++..+.+.++|+.+.+.|++.|    |...+ ..|.|.|+
T Consensus       220 ~~~~l~~~~~-~~~~~~~~q~a~~~~l~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~-~~g~f~~~  286 (335)
T PRK14808        220 FIDAYNRVRL-PFNVSYVSQMFAKVALDHR----EIF---EERTKFIVEERERMKSALREMG----YRITD-SRGNFVFI  286 (335)
T ss_pred             HHHHHHHhcC-CCCCCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CEECC-CCCeEEEE
Confidence              111  222 2445667777766666542    233   3334677788999999999876    55444 46778886


Q ss_pred             CC---CHHHHHHHHHhCCeEEeC---CCcEEEcccCCCCHHHHHHHHHH
Q psy16707        375 GL---NATQVEKLIKEHSVYLTK---DGRISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       375 ~l---~~~~v~~Ll~e~~Vy~~p---~gRis~agl~~~ni~~la~AI~~  417 (420)
                      .+   +.+++...+.++||++..   .-|||++.  .+..+++.+++.+
T Consensus       287 ~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~~--~~~~~~~~~~l~~  333 (335)
T PRK14808        287 FMEKEEKERLLEHLRAKNIAVRSFREGVRITIGK--REENDMILKELEV  333 (335)
T ss_pred             eCCCccHHHHHHHHHHCCeEEEECCCCeEEecCC--HHHHHHHHHHHHh
Confidence            44   345555555789999974   24999874  4778899999875

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.43  E-value=1.2e-11  Score=124.74  Aligned_cols=210  Identities=15%  Similarity=0.106  Sum_probs=146.7

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      .+..++|+.|.   +  ..++++.|.+|............|.+. +.++||+++++++ +     +++++|         
T Consensus        21 ~~~~~~l~~~~---~--~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~-~-----~~~~~i---------   79 (351)
T PRK14807         21 IPYKYKMDANE---T--PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC-S-----VVPTNI---------   79 (351)
T ss_pred             CCceeEccCCC---C--CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh-C-----CCcccE---------
Confidence            34668999997   3  456777888777665443345678764 5799999999986 3     234555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| ||.|++++|+|++|...++..|++                    
T Consensus        80 -------------~it~G~~~~l~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  143 (351)
T PRK14807         80 -------------FVGNGSDEIIHLIMLAF--INK-GDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKV  143 (351)
T ss_pred             -------------EEecCHHHHHHHHHHHh--cCC-CCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHH
Confidence                         56999999999988755  457 999999999999999988888765                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       144 ~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG  223 (351)
T PRK14807        144 IEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVG  223 (351)
T ss_pred             hhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhcee
Confidence                                                                                            


Q ss_pred             ---------hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707        299 ---------KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI  368 (420)
Q Consensus       299 ---------~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~  368 (420)
                               ..+.+ ....+++...|.++..+|.++    .|    ++..+.++++|+.+.+.|++..  + |.. .+++
T Consensus       224 ~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~----~~~~~~~~~~r~~l~~~l~~~~--g-~~~-~~~~  291 (351)
T PRK14807        224 YAVANENILKYLNLVKSPYNINSLSQVIALKVLRTG----VL----KERVNYILNERERLIKELSKIP--G-IKV-YPSK  291 (351)
T ss_pred             eeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHhHH----HH----HHHHHHHHHHHHHHHHHHHhCC--C-cEE-CcCC
Confidence                     11111 113345677787777767531    22    2333567788889999997652  2 654 4567


Q ss_pred             ceEEecCCC-HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        369 GMFCYTGLN-ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       369 GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |+|.|+.++ ++.+..++.++||.+.+.       +  ||+++  +.+..+++.++|++++
T Consensus       292 ~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~  350 (351)
T PRK14807        292 TNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS--SCEANDYLINGLKELL  350 (351)
T ss_pred             ccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence            899997764 455544556789999652       1  99997  4566889999998864

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.43  E-value=6.9e-12  Score=125.38  Aligned_cols=201  Identities=19%  Similarity=0.191  Sum_probs=139.7

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .++|||++|.+    + .++++.|.+|..+...  ..+.|.+..| ++||+++++++ +.     ++++|          
T Consensus        19 ~~~i~l~~~~~----~-~~~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~-~~-----~~~~i----------   74 (346)
T TIGR01141        19 KEVIKLNSNEN----P-FGPPPKAKEALRAEAD--KLHRYPDPDP-AELKQALADYY-GV-----DPEQI----------   74 (346)
T ss_pred             CceEEccCCCC----C-CCCCHHHHHHHHHhHH--HhhcCCCCCH-HHHHHHHHHHh-Cc-----ChHHE----------
Confidence            47999999973    2 4456667777666543  3478987777 99999999976 31     23444          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|+++++..++..+  +.+ ||+|++++|+|+.|..+++..|++                     
T Consensus        75 ------------~~~~G~~~~l~~~~~~l--~~~-gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~  139 (346)
T TIGR01141        75 ------------LLGNGSDEIIELLIRAF--LEP-GDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAI  139 (346)
T ss_pred             ------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhc
Confidence                        56899999998776644  457 899999999999999888877764                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       140 ~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~  219 (346)
T TIGR01141       140 DDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRI  219 (346)
T ss_pred             CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhc
Confidence                                                                                            


Q ss_pred             ------hhh------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC
Q psy16707        299 ------KIL------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT  365 (420)
Q Consensus       299 ------~~~------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~  365 (420)
                            ..+      .+..| +.+.+++.++..+|.+.    .   .++.++++++++|+.+.+.|+++ |    |. +.
T Consensus       220 G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~----~---~~~~~~~~~~~~~~~l~~~L~~~~g----~~-~~  286 (346)
T TIGR01141       220 GYAIANAEIIDALNKVRAPF-NLSRLAQAAAIAALRDD----D---FIEKTVEEINAERERLYDGLKKLPG----LE-VY  286 (346)
T ss_pred             eeeecCHHHHHHHHhccCCC-CCCHHHHHHHHHHhCCH----H---HHHHHHHHHHHHHHHHHHHHHhcCC----CE-EC
Confidence                  000      01122 23445555555555542    1   35566788999999999999886 4    55 34


Q ss_pred             CCCceEEecCCC--HHHH-HHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHH
Q psy16707        366 DQIGMFCYTGLN--ATQV-EKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       366 ~q~GmF~~~~l~--~~~v-~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI  415 (420)
                      ++.|+|.|+.++  .+++ ++| .++||++.|+       +  |||++  +++.++.++++|
T Consensus       287 ~~~g~~~~~~~~~~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l  345 (346)
T TIGR01141       287 PSDANFVLIRFPRDADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAAL  345 (346)
T ss_pred             CCcCCEEEEecCCCHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence            557888887553  4444 555 5789999874       2  89987  667788888775

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.42  E-value=1.7e-11  Score=124.49  Aligned_cols=206  Identities=17%  Similarity=0.168  Sum_probs=148.0

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      .+++|||+.|.  ++.   .+++.++++......  ....|.+..| .+||+++++++ |.     ++++|         
T Consensus        35 ~~~~i~l~~~~--~~~---~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~-~~-----~~~~i---------   91 (371)
T PRK05166         35 VPRIAKLGSNE--NPL---GPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART-GV-----PADRI---------   91 (371)
T ss_pred             CcceEEcCCCC--CCC---CCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHE---------
Confidence            45789999996  222   356677777766543  3567999999 59999999976 32     24455         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|++.++.+.+..+  +.| ||.|++++|+|+.|...++..|++                    
T Consensus        92 -------------~~t~G~~~~l~~~~~~~--~~~-gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~  155 (371)
T PRK05166         92 -------------ILGNGSEDLIAVICRAV--LRP-GDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAA  155 (371)
T ss_pred             -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHh
Confidence                         56999999999887655  457 999999999999999988888775                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       156 ~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l  235 (371)
T PRK05166        156 VARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGL  235 (371)
T ss_pred             hhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhc
Confidence                                                                                            


Q ss_pred             ----------------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy16707        299 ----------------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP  360 (420)
Q Consensus       299 ----------------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~  360 (420)
                                      .  ...+. ..+++...+.++..+|.+    .+|.   +..++.++++|+.+.+.|++.|    
T Consensus       236 ~GlRiG~~i~~~~~l~~~~~~~~~-~~~~~~~~q~~~~~~l~~----~~~~---~~~~~~~~~~r~~l~~~L~~~g----  303 (371)
T PRK05166        236 AGLRVGYGLVSDPELVGLLDRVRT-PFNVNGAAQAAALAALDD----EEHL---AKGVALALAERERLKKELAEMG----  303 (371)
T ss_pred             chhheeeeecCCHHHHHHHHHhcc-CCCCCHHHHHHHHHHhcC----HHHH---HHHHHHHHHHHHHHHHHHHHCc----
Confidence                            0  11122 234566677666666654    2443   4445788899999999999886    


Q ss_pred             CcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        361 WNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       361 w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +. +.++.|+|.|+.++   .++++.|+ ++||.+.|+.        ||+++.  .+..+.+.+++.+++
T Consensus       304 ~~-~~p~~g~fl~~~~~~~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i~  369 (371)
T PRK05166        304 YR-IAPSRANFLFFDARRPASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKVL  369 (371)
T ss_pred             Ce-eCCCcCCEEEEeCCCCHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence            44 35677999997653   34556775 5799998861        999983  456899999988753

>KOG0256|consensus

Probab=99.42  E-value=5.5e-12  Score=127.87  Aligned_cols=193  Identities=16%  Similarity=0.254  Sum_probs=141.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC
Q psy16707        196 DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE  275 (420)
Q Consensus       196 ~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g  275 (420)
                      ..-|.+..|+++||+|+|+++-..     +.+++. +||++-              |.+.|+|+|....+-.|  ++| |
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~-----r~~~v~-fdP~~~--------------Vv~~G~T~ane~l~fcL--adp-g  170 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERA-----RGNRVK-FDPERV--------------VVTNGATSANETLMFCL--ADP-G  170 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHH-----hCCCCc-cCccce--------------EEecccchhhHHHHHHh--cCC-C
Confidence            457888999999999999998221     112221 444333              78999999999887655  558 9


Q ss_pred             CEEEEcCCCCCCcHHHHhhc-Ccc--------------------------------------------------------
Q psy16707        276 KVIYVPTPTWGNHIPICKHT-GLE--------------------------------------------------------  298 (420)
Q Consensus       276 d~VlvpdP~w~ny~~i~~~a-G~~--------------------------------------------------------  298 (420)
                      |.-+||.|+||-+..-.+-- |.+                                                        
T Consensus       171 dafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~  250 (471)
T KOG0256|consen  171 DAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELIS  250 (471)
T ss_pred             ceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHH
Confidence            99999999999886433321 221                                                        


Q ss_pred             ---------------------------------------------------------------------hh---hh--hh
Q psy16707        299 ---------------------------------------------------------------------KI---LI--RA  304 (420)
Q Consensus       299 ---------------------------------------------------------------------~~---~~--r~  304 (420)
                                                                                           +.   .+  -+
T Consensus       251 ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms  330 (471)
T KOG0256|consen  251 LLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS  330 (471)
T ss_pred             HHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh
Confidence                                                                                 11   11  33


Q ss_pred             ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------
Q psy16707        305 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------  377 (420)
Q Consensus       305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------  377 (420)
                      .++..+.+.|++++.+|+|......+..|.+   .|++.+-..+.+.|+++|.    .+++.+.|.|+|..+.       
T Consensus       331 sf~~vSs~tQ~~la~LLSD~~f~~~yl~en~---~Rl~~rh~~~~~gLk~lgI----~cl~s~AGlF~wvDlr~lL~s~t  403 (471)
T KOG0256|consen  331 SFGLVSSQTQYLLASLLSDEEFTREYLRENN---KRLRIRHRYIVEGLKALGI----PCLKSNAGLFCWVDLRKLLTSLT  403 (471)
T ss_pred             hccCCcHHHHHHHHHHhchHHHHHHHHHHHH---HHHHHHHHHHHhhHHhcCC----ceeecCCeeEEEEEhHHhcCcCC
Confidence            5666788999999999999766666555555   9999999999999999995    4689999999996432       


Q ss_pred             -H-H--HHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHH
Q psy16707        378 -A-T--QVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       378 -~-~--~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~v  418 (420)
                       + |  --++++++-+|-++||.          |+.||...++.++-.-+-|+.+
T Consensus       404 fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~  458 (471)
T KOG0256|consen  404 FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQF  458 (471)
T ss_pred             hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence             1 2  22788888899999983          9999987777666444555443

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.41  E-value=1.7e-11  Score=129.01  Aligned_cols=103  Identities=9%  Similarity=0.009  Sum_probs=77.7

Q ss_pred             cCCCCceeecccccccCCCCCCchH---HHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707        157 DTNVNKINLGVGAYRDDQGKPYVLP---SVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQ  233 (420)
Q Consensus       157 d~~~~kInL~iG~y~d~dg~~~~~~---~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~  233 (420)
                      +.+.+.|+|++|.   ++-++.++.   .+.++....... ..+.|++..|.++|++++++++ |..       .|    
T Consensus        33 ~~g~~~~~L~~g~---p~~D~~tds~t~a~~~a~~~a~~~-g~~~Y~~~~g~~~Lreaia~~~-~~~-------~v----   96 (460)
T PRK13238         33 EAGYNPFLLKSED---VFIDLLTDSGTGAMSDRQWAAMMR-GDEAYAGSRSYYRLEDAVKDIF-GYP-------YT----   96 (460)
T ss_pred             HcCCCEEeCCCCC---CCCCCCCCCCchhhhHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHh-CCC-------cE----
Confidence            4578999999996   533344444   466655555433 5678999999999999999977 322       23    


Q ss_pred             ccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                                        +.|.|||+|+.+++..+  +.| || |++++|+|++|...++.+|+
T Consensus        97 ------------------v~t~ggt~A~~~~~~al--l~p-GD-Vii~~p~~~~~~~~i~~~G~  138 (460)
T PRK13238         97 ------------------IPTHQGRAAEQILFPVL--IKK-GD-VVPSNYHFDTTRAHIELNGA  138 (460)
T ss_pred             ------------------EECCCHHHHHHHHHHHh--CCC-CC-EEccCCcccchHHHHHHcCC
Confidence                              67999999999987644  668 99 99999999999887666553

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.40  E-value=5.6e-11  Score=120.88  Aligned_cols=214  Identities=16%  Similarity=0.202  Sum_probs=145.3

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..+.|+|+.|.     ...++++.+.+|......+.....|.+..|.++||+++++++ |.     ++++|         
T Consensus        27 ~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l-~~-----~~~~v---------   86 (380)
T PRK06225         27 DKEMIWMGQNT-----NHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL-GL-----DDDEA---------   86 (380)
T ss_pred             cCCeEEccCCC-----CCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc-CC-----CCCcE---------
Confidence            35789999885     234667778878777665433567999999999999999975 43     23444         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+|+++.+++..+  +.| ||+|++++|+|+.|...++..|.+                    
T Consensus        87 -------------~~~~g~t~al~~~~~~~--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l  150 (380)
T PRK06225         87 -------------LITAGATESLYLVMRAF--LSP-GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELV  150 (380)
T ss_pred             -------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHH
Confidence                         66999999999998755  447 899999999999998777666553                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       151 ~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~  230 (380)
T PRK06225        151 KENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMA  230 (380)
T ss_pred             HhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCc
Confidence                                                                                            


Q ss_pred             --------------hh--hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCC
Q psy16707        299 --------------KI--LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPW  361 (420)
Q Consensus       299 --------------~~--~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w  361 (420)
                                    ..  .......+++..++.++...|...   .+|.   +.+++.++++++.+.+.|+++ |.  .+
T Consensus       231 G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~---~~~~~~~~~~~~~l~~~L~~~~~~--~~  302 (380)
T PRK06225        231 GLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWI---DRIRRTTFKNQKLIKEAVDEIEGV--FL  302 (380)
T ss_pred             cceeEEEecCHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHH---HHHHHHHHHHHHHHHHHHHhCcCC--cc
Confidence                          00  001111223444555554444321   3443   444566777788888888874 31  12


Q ss_pred             cccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        362 NHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       362 ~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      . ..+..|.|.|+.+     +. +.++.| .++||++.|+       |    |++++ .++++++.+.++|.+++
T Consensus       303 ~-~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~iR~s~~-~~~e~l~~~~~~l~~~~  374 (380)
T PRK06225        303 P-VYPSHGNMMVIDISEAGIDPEDLVEYL-LERKIFVRQGTYTSKRFGDRYIRVSFS-IPREQVEVFCEEFPDVV  374 (380)
T ss_pred             c-cCCCCCeEEEEEcccccCCHHHHHHHH-HHCCEEEcCCcccCcCCCCceEEEEeC-CCHHHHHHHHHHHHHHH
Confidence            2 2346677877543     43 444666 4889999874       1    99997 57889999999998875

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.39  E-value=4.9e-11  Score=120.31  Aligned_cols=208  Identities=16%  Similarity=0.133  Sum_probs=146.3

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      ...++|||+.|.  ++-|   +++.+.++......  ....|.+..| ++||+++++++ +.     ++++|        
T Consensus        30 ~~~~~i~l~~~~--~~~~---~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~-~~-----~~~~i--------   87 (367)
T PRK02731         30 GIADIIKLASNE--NPLG---PSPKAIEAIRAAAD--ELHRYPDGSG-FELKAALAEKF-GV-----DPERI--------   87 (367)
T ss_pred             CCCceEEecCCC--CCCC---CCHHHHHHHHHHHH--hhcCCCCCcH-HHHHHHHHHHh-Cc-----CHHHE--------
Confidence            456789999996  2223   35667777666543  2467876654 79999999976 32     23445        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                    +.|.|+++++.+.+..+  +.+ ||+|++++|+|+.|...++..|++                   
T Consensus        88 --------------~~t~G~~~~l~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~  150 (367)
T PRK02731         88 --------------ILGNGSDEILELLARAY--LGP-GDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAA  150 (367)
T ss_pred             --------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHH
Confidence                          56999999998877655  447 899999999999999888877775                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       151 ~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~  230 (367)
T PRK02731        151 VTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLA  230 (367)
T ss_pred             hCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCc
Confidence                                                                                            


Q ss_pred             --------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q psy16707        299 --------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN  362 (420)
Q Consensus       299 --------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~  362 (420)
                                    ..+  .+..+ +.+..++.++..+|++    ..|   ++.+++.++++|+.+.+.|++.|    |.
T Consensus       231 G~RiG~l~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~  298 (367)
T PRK02731        231 GLRVGYGIAPPEIIDALNRVRQPF-NVNSLALAAAVAALDD----DAF---VEKSRALNAEGMAWLTEFLAELG----LE  298 (367)
T ss_pred             ccceeeeeCCHHHHHHHHHccCCC-CCCHHHHHHHHHHhCC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----Cc
Confidence                          001  12222 3355667777666764    234   34455788889999999999886    44


Q ss_pred             ccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------CcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        363 HITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       363 ~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------gRis~agl~~~ni~~la~AI~~vv~  420 (420)
                      .. ++.|.|.|+.+    ++ ++++.| .++||++.++        -||+++  +.+.++.+.+++.++++
T Consensus       299 ~~-~~~g~~~~i~~~~~~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        299 YI-PSVGNFILVDFDDGKDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA  365 (367)
T ss_pred             cC-CCCceEEEEECCCCCCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence            44 46789998765    34 445666 5789999874        299987  56889999999998763

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.39  E-value=4e-11  Score=121.15  Aligned_cols=206  Identities=13%  Similarity=0.083  Sum_probs=145.0

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||++|+   + + .++++.|.+|.......  ...|++ .|.+++|+++++++ +.     ++++|          
T Consensus        20 ~~~i~l~~~~---~-~-~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~-~~-----~~~~i----------   75 (356)
T PRK08056         20 DQLLDFSANI---N-P-LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH-QV-----PASWI----------   75 (356)
T ss_pred             hhEEEecccc---C-C-CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh-Cc-----ChhhE----------
Confidence            4679999996   2 2 45677777776654432  346865 57999999999986 32     34555          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|++.++.+++..+   .| |+ +++++|+|++|..+++..|++                     
T Consensus        76 ------------~it~Ga~~~l~~~~~~l---~~-g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~  138 (356)
T PRK08056         76 ------------LAGNGETESIFAVVSGL---KP-RR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEA  138 (356)
T ss_pred             ------------EECCCHHHHHHHHHHHh---CC-CC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHh
Confidence                        56999999999888754   36 65 788899999999999888764                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       139 ~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G  218 (356)
T PRK08056        139 LTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPG  218 (356)
T ss_pred             ccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcc
Confidence                                                                                            


Q ss_pred             --------------hhhh-hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707        299 --------------KILI-RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH  363 (420)
Q Consensus       299 --------------~~~~-r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~  363 (420)
                                    ..+. +....+++..++.++..+|.+    ..|.   +.++++++++|+.+.+.|++++  + |..
T Consensus       219 ~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~----~~~~---~~~~~~~~~~r~~l~~~L~~~~--~-~~~  288 (356)
T PRK08056        219 LRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQD----RAYQ---QATWQWLAEEGARFYQALCALP--L-LTV  288 (356)
T ss_pred             hhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCC----HHHH---HHHHHHHHHHHHHHHHHHhcCC--C-cEE
Confidence                          0111 112233455677666666754    3553   5566889999999999998763  1 543


Q ss_pred             cCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        364 ITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       364 i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                      . ++.|+|.|+.++   .++++.|+ ++||.+.++        +  ||+++  +.++.+.+.++++++++
T Consensus       289 ~-~~~~~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~  354 (356)
T PRK08056        289 W-PGRANYLFLRCERPDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT  354 (356)
T ss_pred             c-CCCCcEEEEEcCCChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence            3 557899987653   34556665 789999763        1  99987  45788999999998764

>PLN02672 methionine S-methyltransferase

Probab=99.38  E-value=3.7e-11  Score=136.25  Aligned_cols=219  Identities=17%  Similarity=0.114  Sum_probs=147.0

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC-CceeeecccCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD-NLISIVQGISG  237 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~-~~i~~~~~~~~  237 (420)
                      ++++|+|++|.   +  ..++++.|++|....... .  .|  ..|.+++++++++++-..++...++ +.         
T Consensus       696 g~~vI~LsinE---~--d~ppPp~V~eAi~eal~~-~--~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~---------  756 (1082)
T PLN02672        696 ESSLIHMDVDE---S--FLPVPSAVKASIFESFVR-Q--NI--SESETDPRPSILQFIKSNYGFPTDSCTE---------  756 (1082)
T ss_pred             CCCEEEEeCCC---C--CCCCCHHHHHHHHHHHhh-c--CC--CCCChHHHHHHHHHHHHHhCcCCCCCCE---------
Confidence            57899999996   3  356788888887765432 2  22  4578899999999984433222222 23         


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                   |+.|.|.++++..+...+  +.| ||.|++|+|+|++|...++..|++                   
T Consensus       757 -------------IIvt~Gs~elL~lll~aL--l~p-GD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~L  820 (1082)
T PLN02672        757 -------------FVYGDTSLALFNKLVLCC--VQE-GGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTL  820 (1082)
T ss_pred             -------------EEEeCCHHHHHHHHHHHH--cCC-CCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence                         366888889998877644  458 999999999999999999988875                   


Q ss_pred             ----------------------------------------------------------hh-----hh----hh-------
Q psy16707        299 ----------------------------------------------------------KI-----LI----RA-------  304 (420)
Q Consensus       299 ----------------------------------------------------------~~-----~~----r~-------  304 (420)
                                                                                ..     +.    ..       
T Consensus       821 e~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~  900 (1082)
T PLN02672        821 ASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSF  900 (1082)
T ss_pred             HHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCc
Confidence                                                                      00     00    00       


Q ss_pred             ------ccC--------------CCch-HHHHHHHHH-hCCh------------h-h---HHHHHHHHHHHHHHHHHHHH
Q psy16707        305 ------FYS--------------SPPI-HGARIVQEI-LGDP------------K-L---KAQWLTEVKGMADRIISMRQ  346 (420)
Q Consensus       305 ------~~s--------------~pp~-~ga~iv~~I-L~dp------------~-L---~~~w~~el~~m~~r~~~~R~  346 (420)
                            ++|              .|+. .-..+.... +..+            + +   ...|.+.++++++.|+++|+
T Consensus       901 nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd  980 (1082)
T PLN02672        901 AVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAE  980 (1082)
T ss_pred             eEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence                  000              0111 011110000 0111            0 0   13477888899999999999


Q ss_pred             HHHHHHHhcCCCCCCcccCCCCceEEecC---------------------CCH-HHHHHHHHhCCeEEeCC------C--
Q psy16707        347 SLKDNLQKEGSNKPWNHITDQIGMFCYTG---------------------LNA-TQVEKLIKEHSVYLTKD------G--  396 (420)
Q Consensus       347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~---------------------l~~-~~v~~Ll~e~~Vy~~p~------g--  396 (420)
                      .+.+.|++.|    |.+.++++|+|.|..                     +++ +++++|++++||.+.||      |  
T Consensus       981 ~L~e~L~~~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~ 1056 (1082)
T PLN02672        981 RLKETLEACG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYC 1056 (1082)
T ss_pred             HHHHHHHHCC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeE
Confidence            9999999987    777888999999962                     233 46688999999999996      2  


Q ss_pred             cEEEcccCCCCHHHHHHHHHH
Q psy16707        397 RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       397 Ris~agl~~~ni~~la~AI~~  417 (420)
                      |||++ .+.+.++...+.|.+
T Consensus      1057 RIsfa-~~~e~LeeALerL~k 1076 (1082)
T PLN02672       1057 RFSFA-LEDSEFDRALKAIAR 1076 (1082)
T ss_pred             EEEec-CCHHHHHHHHHHHHH
Confidence            99998 466666666666654

>KOG0259|consensus

Probab=99.38  E-value=1.6e-10  Score=116.43  Aligned_cols=236  Identities=17%  Similarity=0.149  Sum_probs=172.3

Q ss_pred             ChHHHHHHHHHccCC----CCceeecccccccCC--CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        145 PSSNLLTEAFKKDTN----VNKINLGVGAYRDDQ--GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       145 d~i~~l~~~~~~d~~----~~kInL~iG~y~d~d--g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      -++..+........+    ..+|-|+.|.   |.  +.+.+-+.+.+|..........++|+|..|++.-|+|+|+++.+
T Consensus        42 ~tir~i~~~l~~~~~p~~~k~iipl~~GD---Psv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~  118 (447)
T KOG0259|consen   42 VTIRGILSALFDCCDPEKKKPILPLGHGD---PSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNR  118 (447)
T ss_pred             ccHHHHHHHHhhcCCcccCceeccCCCCC---CCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhc
Confidence            345555444433333    3568999983   33  55666677777766666556678999999999999999999766


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .-...++++                      +++.|.|=++|+.++...|++  | |..|++|-|+||-|...+...|++
T Consensus       119 ~l~~kl~a~----------------------DV~ltsGC~qAIe~~i~~LA~--p-~aNILlPrPGfp~Y~~~a~~~~lE  173 (447)
T KOG0259|consen  119 DLPNKLTAD----------------------DVVLTSGCSQAIELAISSLAN--P-GANILLPRPGFPLYDTRAIYSGLE  173 (447)
T ss_pred             CCCCccCcC----------------------ceEEeccchHHHHHHHHHhcC--C-CCceecCCCCCchHHHhhhhcCce
Confidence            543334444                      347799999999999987764  8 999999999999999999988886


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       174 VR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvp  253 (447)
T KOG0259|consen  174 VRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVP  253 (447)
T ss_pred             eEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccc
Confidence                                                                                            


Q ss_pred             -----------------------------------------hh----h--hhhccCCCchHHHHHHHHHhCChhhHHHHH
Q psy16707        299 -----------------------------------------KI----L--IRAFYSSPPIHGARIVQEILGDPKLKAQWL  331 (420)
Q Consensus       299 -----------------------------------------~~----~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~  331 (420)
                                                               ..    +  .-.....|++.-|.+.-.||..  ..+++-
T Consensus       254 mg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k--Tp~efF  331 (447)
T KOG0259|consen  254 MGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK--TPEEFF  331 (447)
T ss_pred             hhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh--ChHHHH
Confidence                                                     11    1  1223567788888878888742  224443


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC----
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG----  396 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g----  396 (420)
                      +..   ..-+++.-+..++.|++.-.   .. ...+.+-||.|++++          -+|+.+|.+|.+|++.||-    
T Consensus       332 ~k~---~~~lk~na~l~y~~Lk~IP~---l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~  405 (447)
T KOG0259|consen  332 DKK---LSFLKSNADLCYSRLKDIPC---LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGL  405 (447)
T ss_pred             HHH---HHHHHhhHHHHHHHHhcCCC---cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccC
Confidence            333   35577788899999987632   34 566777899998765          3799999999999999983    


Q ss_pred             ----cEEEcccCCCCHHHHHHHHHH
Q psy16707        397 ----RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       397 ----Ris~agl~~~ni~~la~AI~~  417 (420)
                          ||+++ +..+-+++.++.|++
T Consensus       406 ~nw~Ri~i~-~~~~~leea~~Rik~  429 (447)
T KOG0259|consen  406 KNWLRIVIT-VEEEMLEEAFSRIKE  429 (447)
T ss_pred             CCeEEEEEc-cChHHHHHHHHHHHH
Confidence                99998 788888887777764

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.36  E-value=4.8e-11  Score=119.90  Aligned_cols=200  Identities=19%  Similarity=0.194  Sum_probs=138.9

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||+.|.   +.  .++++.+.++......+.....|. ..|.++||+++++++ |     +++++|          
T Consensus        18 ~~~i~l~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~-~-----~~~~~I----------   75 (337)
T PRK03967         18 NYRIWLDKNE---NP--FDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY-G-----LDAENI----------   75 (337)
T ss_pred             CceEEecCCC---CC--CCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh-C-----cCcceE----------
Confidence            4679999996   22  245556666655544322356785 579999999999987 3     234555          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|+++++...+..+    + ||+|++++|+|+.|..+++..|++                     
T Consensus        76 ------------~~t~G~~~~l~~~~~~~----~-gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~  138 (337)
T PRK03967         76 ------------AVGNGSDELISYLVKLF----E-GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA  138 (337)
T ss_pred             ------------EEcCCHHHHHHHHHHHh----C-CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc
Confidence                        66999999998776532    7 899999999999999888877764                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       139 ~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~  218 (337)
T PRK03967        139 KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIA  218 (337)
T ss_pred             cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeec
Confidence                                                                                            


Q ss_pred             -------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE
Q psy16707        299 -------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF  371 (420)
Q Consensus       299 -------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF  371 (420)
                             ....+..| +++..++.++..+|++.    +|..+.   +.++.+.|+.+.+.|.+..        .+.+|+|
T Consensus       219 ~~~~i~~~~~~~~~~-~~~~~~q~~~~~~l~~~----~~~~~~---~~~~~~~r~~l~~~L~~~~--------~~~~~~~  282 (337)
T PRK03967        219 NEEIIDALYRIKPPF-SLNILTMKIVRLALDHY----DLIEER---IDYIIKERERVRRELGEYA--------YPSDANF  282 (337)
T ss_pred             CHHHHHHHHhhcCCC-CCCHHHHHHHHHHHhCH----HHHHHH---HHHHHHHHHHHHHHhccCc--------CCCCCcE
Confidence                   11123334 45788999888888764    343322   2455667888888886542        3578999


Q ss_pred             EecCCCHHHHHHHHHhCCeEEeCC-------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        372 CYTGLNATQVEKLIKEHSVYLTKD-------GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       372 ~~~~l~~~~v~~Ll~e~~Vy~~p~-------gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      .|+.++  ..+.|+ ++||.+.+.       -||+++  +.++.+.+.++|.++.
T Consensus       283 ~~~~~~--~~~~l~-~~gi~v~~~~~~~~~~~Ri~~~--~~~~~~~l~~~l~~~~  332 (337)
T PRK03967        283 LLLKLD--AYDYLL-ENGIVVRKLSGRLEGHIRVTVG--KREENDEFIKALKEIK  332 (337)
T ss_pred             EEEhHH--HHHHHH-HCCEEEEeCCCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence            998764  456665 679999643       199987  3467788988887753

>PRK03321 putative aminotransferase; Provisional

Probab=99.35  E-value=9.3e-11  Score=117.78  Aligned_cols=206  Identities=17%  Similarity=0.162  Sum_probs=141.8

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .++|||++|.     +...+++.|.+|......  ....| |..|.++||+++++++ +     +++++|          
T Consensus        22 ~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~--~~~~y-~~~g~~~lr~~ia~~~-~-----~~~~~I----------   77 (352)
T PRK03321         22 PGAIKLSSNE-----TPFGPLPSVRAAIARAAA--GVNRY-PDMGAVELRAALAEHL-G-----VPPEHV----------   77 (352)
T ss_pred             ccceeccCCC-----CCCCCCHHHHHHHHHHHH--hcCcC-CCCcHHHHHHHHHHHh-C-----cCHHHE----------
Confidence            3689999996     224456678888776654  24567 5679999999999987 3     234445          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|.++++..++..+  +.| ||.|++|+|+|+.|...++..|++                     
T Consensus        78 ------------~~~~G~~~~l~~~~~~~--~~~-gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~  142 (352)
T PRK03321         78 ------------AVGCGSVALCQQLVQAT--AGP-GDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAI  142 (352)
T ss_pred             ------------EECCCHHHHHHHHHHHh--cCC-CCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhh
Confidence                        55888888888877644  457 999999999999998888877764                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       143 ~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G  222 (352)
T PRK03321        143 TDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAG  222 (352)
T ss_pred             ccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHH
Confidence                                                                                            


Q ss_pred             -------------hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy16707        299 -------------KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI  364 (420)
Q Consensus       299 -------------~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i  364 (420)
                                   ..+.+ ....+++..++.++...|.+   ...|.+.+    .++.+.|+.+.+.|++.|    |.. 
T Consensus       223 lRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~---~~~~~~~~----~~~~~~r~~~~~~L~~~~----~~~-  290 (352)
T PRK03321        223 LRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLAA---EDELLERV----DAVVAERDRVRAALRAAG----WTV-  290 (352)
T ss_pred             HhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC---HHHHHHHH----HHHHHHHHHHHHHHHHCC----Ccc-
Confidence                         11111 11224456666655555643   13443333    344566778999998876    553 


Q ss_pred             CCCCceEEecCCC--H-HHHHHHHHhCCeEEeCC----CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        365 TDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKD----GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       365 ~~q~GmF~~~~l~--~-~~v~~Ll~e~~Vy~~p~----gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      .+..|+|.|+.+.  . ++++.| +++||.+.+-    -||+++  +.+..+++.+++++++
T Consensus       291 ~~~~g~~i~i~l~~~~~~~~~~l-~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~  349 (352)
T PRK03321        291 PPSQANFVWLPLGERTADFAAAA-AEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWR  349 (352)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHH-HHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHh
Confidence            4457999997653  3 455665 7899999873    288886  6788999999998864

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.34  E-value=1.2e-10  Score=117.00  Aligned_cols=214  Identities=17%  Similarity=0.203  Sum_probs=142.8

Q ss_pred             HHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC
Q psy16707        147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD  226 (420)
Q Consensus       147 i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~  226 (420)
                      +..+.+.+..+ ..++|||++|.   +  ...++|.++++......  ..+.|.+..+ ++||+++++++ |.     ++
T Consensus        22 ~~~~~~~~~~~-~~~~i~l~~~~---~--~~~~~~~~~~~~~~~~~--~~~~y~~~~~-~~lr~~ia~~~-~~-----~~   86 (361)
T PRK00950         22 KEEIAREYGID-PESIIKLGSNE---N--PLGPSPKAVEAIEKELS--KIHRYPEPDA-PELREALSKYT-GV-----PV   86 (361)
T ss_pred             HHHHHHHhCCC-ccceEEccCCC---C--CCCCCHHHHHHHHHHHH--hhcCCCCCCH-HHHHHHHHHHh-CC-----CH
Confidence            44455555332 23789999996   2  13355666666655443  2467877655 99999999986 42     23


Q ss_pred             CceeeecccCCCCccccccccccceee-cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------
Q psy16707        227 NLISIVQGISGTGSLRVGAAFQISIVQ-GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------  298 (420)
Q Consensus       227 ~~i~~~~~~~~~~~~~~~~~~~~~~vq-t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------  298 (420)
                      +.|                      +. |.|.++++.+++..+  +.| ||.|++++|+|+.|...++..|++       
T Consensus        87 ~~i----------------------~~~~~Ga~~~i~~~~~~~--~~~-gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~  141 (361)
T PRK00950         87 ENI----------------------IVGGDGMDEVIDTLMRTF--IDP-GDEVIIPTPTFSYYEISAKAHGAKPVYAKRE  141 (361)
T ss_pred             HHE----------------------EEeCCCHHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCEEEEeecC
Confidence            444                      44 567778888877644  447 899999999999999888887774       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       142 ~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~  221 (361)
T PRK00950        142 EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTF  221 (361)
T ss_pred             CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEee
Confidence                                                                                            


Q ss_pred             -----------------hhh------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707        299 -----------------KIL------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE  355 (420)
Q Consensus       299 -----------------~~~------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~  355 (420)
                                       ..+      .+..+ +.+..++.++...|.+    .+|   +++++++++++|+.+.+.|.  
T Consensus       222 SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~r~~l~~~l~--  291 (361)
T PRK00950        222 SKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF-SLTRLSQAAAIAALSD----KEY---IEKSIEHGIKSREYLYNELP--  291 (361)
T ss_pred             hHhhcCchhhcchhcCCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHhhcC--
Confidence                             111      12223 2455666666666654    233   44556888888998887764  


Q ss_pred             CCCCCCcccCCCCceEEecCC---CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        356 GSNKPWNHITDQIGMFCYTGL---NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       356 g~~~~w~~i~~q~GmF~~~~l---~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                           +. +.++.|+|.|+.+   +. ++++.|. ++||++.|+        +  |||++  +.+.++++.+++++++
T Consensus       292 -----~~-~~~~~~~~i~~~~~~~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il  360 (361)
T PRK00950        292 -----FK-VYPSEANFVLVDVTPMTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV  360 (361)
T ss_pred             -----ee-ECCCcceEEEEECCCCCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence                 22 3456788998744   33 4556664 679999763        1  99988  5678999999999875

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.31  E-value=1.7e-10  Score=116.71  Aligned_cols=204  Identities=18%  Similarity=0.148  Sum_probs=141.9

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+++||+.|.  ++.+   .++.+.++......  ....|++ .|.++||+++++++ +     +++++|          
T Consensus        19 ~~~~~l~~~~--~~~~---~p~~~~~a~~~~~~--~~~~Y~~-~~~~~lr~~ia~~~-~-----~~~~~i----------   74 (354)
T PRK06358         19 NMILDFSANI--NPLG---VPESLKQAITENLD--KLVEYPD-PDYLELRKRIASFE-Q-----LDLENV----------   74 (354)
T ss_pred             cceEEecCCC--CCCC---CCHHHHHHHHHHHH--hhhcCCC-ccHHHHHHHHHHHh-C-----CChhhE----------
Confidence            4579999996  3333   35677777666543  3456854 57999999999987 3     345555          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|++.++.+++..+    . ++.|++++|+|+.|...++..|++                     
T Consensus        75 ------------~it~Ga~~~l~~~~~~~----~-~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~  137 (354)
T PRK06358         75 ------------ILGNGATELIFNIVKVT----K-PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEE  137 (354)
T ss_pred             ------------EECCCHHHHHHHHHHHh----C-CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHh
Confidence                        56999999999887644    2 368999999999999998877664                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       138 ~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl  217 (354)
T PRK06358        138 IKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAI  217 (354)
T ss_pred             hccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccC
Confidence                                                                                            


Q ss_pred             ----------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy16707        299 ----------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP  360 (420)
Q Consensus       299 ----------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~  360 (420)
                                      ..+  .+..| +.+...+.++..+|++    .   +.++.++++++++|+.+.+.|++.+  + 
T Consensus       218 ~G~RiG~lv~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~----~---~~~~~~~~~~~~~r~~l~~~L~~~~--~-  286 (354)
T PRK06358        218 PGLRLGYGLTSNKNLAEKLLQMREPW-SINTFADLAGQTLLDD----K---EYIKKTIQWIKEEKDFLYNGLSEFK--G-  286 (354)
T ss_pred             cchhheeeecCCHHHHHHHHHhCCCC-cchHHHHHHHHHHhcc----H---HHHHHHHHHHHHHHHHHHHHHhcCC--C-
Confidence                            011  11122 2355556666655643    2   2346667889999999999998762  2 


Q ss_pred             CcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        361 WNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       361 w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +....+ .|.|.|+.++  .++.+.|+ ++||.+.|+.          ||+++  +.+..++|.+++++++
T Consensus       287 ~~~~~~-~g~f~~~~~~~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        287 IKVYKP-SVNFIFFKLEKPIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL  353 (354)
T ss_pred             cEEcCC-cceEEEEEcCchHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence            554444 5678887764  45566665 6899998851          78875  5688899999998876

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.29  E-value=4.3e-10  Score=113.67  Aligned_cols=217  Identities=18%  Similarity=0.197  Sum_probs=165.2

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      .++++-|.|-.     -+++++|.|.+|.++-.+ .+..+|+  .+.++|-+|+++|+...+.-.++++-|         
T Consensus        24 ~~DvlPmWVAD-----MDf~~pp~i~~Al~~rvd-hGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i---------   86 (388)
T COG1168          24 NEDVLPMWVAD-----MDFPTPPEIIEALRERVD-HGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWI---------   86 (388)
T ss_pred             CCCcceeeeec-----ccCCCCHHHHHHHHHHHh-cCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceE---------
Confidence            46888888874     678999999999998775 4778887  788999999999997777655666655         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.++|.--++.++.+.|..  | ||.|+|+.|.|+++....+..|-+                    
T Consensus        87 -------------~~~p~VVpgi~~~I~~~T~--~-gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~L  150 (388)
T COG1168          87 -------------VFVPGVVPGISLAIRALTK--P-GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDAL  150 (388)
T ss_pred             -------------EEcCcchHhHHHHHHHhCc--C-CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHH
Confidence                         5688999999999988865  7 999999999999999999988775                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       151 E~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~sa  230 (388)
T COG1168         151 EKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSA  230 (388)
T ss_pred             HHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeec
Confidence                                                                                            


Q ss_pred             --------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 --------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL  352 (420)
Q Consensus       299 --------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L  352 (420)
                                                ..+.+.....|...|..+.....++-   ++|.+++.   +=++..|+-+.+.|
T Consensus       231 SKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G---~~WLd~L~---~yl~~N~~~~~~~l  304 (388)
T COG1168         231 SKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG---EPWLDELL---EYLKDNRDYVADFL  304 (388)
T ss_pred             cccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---hHHHHHHH---HHHHHHHHHHHHHH
Confidence                                      44456777788888876444445443   68988888   66888999999999


Q ss_pred             HhcCCCCCCcccCCCCceEE-e-----cCCCH-HHHHHHHHhCCeEEeCC------C----cEEEcccCCCCHHHHHHHH
Q psy16707        353 QKEGSNKPWNHITDQIGMFC-Y-----TGLNA-TQVEKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       353 ~~~g~~~~w~~i~~q~GmF~-~-----~~l~~-~~v~~Ll~e~~Vy~~p~------g----Ris~agl~~~ni~~la~AI  415 (420)
                      .+.- |  |-.++.+.|.|. |     +|+++ +-.+.|+++.+|.+.+|      |    |+|++ .+-.-++...+.|
T Consensus       305 ~~~~-P--~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a-cpr~~L~eal~ri  380 (388)
T COG1168         305 NKHL-P--GVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA-CPRAILEEALERL  380 (388)
T ss_pred             HhhC-C--CcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC-CCHHHHHHHHHHH
Confidence            8763 3  455666666666 6     47775 44589999999999986      2    99998 4444444444444


Q ss_pred             HHH
Q psy16707        416 HAV  418 (420)
Q Consensus       416 ~~v  418 (420)
                      .++
T Consensus       381 ~~a  383 (388)
T COG1168         381 KRA  383 (388)
T ss_pred             HHH
Confidence            443

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.23  E-value=4.6e-10  Score=112.41  Aligned_cols=208  Identities=15%  Similarity=0.168  Sum_probs=141.0

Q ss_pred             hHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcccc
Q psy16707        146 SSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLK  225 (420)
Q Consensus       146 ~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~  225 (420)
                      ||-.+...+. .+.++.|+++.|.  ++.+ +   +. .++.   .  ...+.|.+..| ++||+++++++ |.     +
T Consensus         4 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~-~---~~-~~~~---~--~~~~~y~~~~~-~~lr~~la~~~-~~-----~   63 (330)
T TIGR01140         4 NLRRAAARYG-IPPEDWLDFSTGI--NPLG-P---PV-PPIP---A--SAWARYPDPEY-DELRAAAAAYY-GL-----P   63 (330)
T ss_pred             cHHHHHHHcC-CChhheeEccccC--CCCC-C---Ch-hhcc---h--HHHhhCCCccH-HHHHHHHHHHh-CC-----C
Confidence            3444544442 2367889999997  2322 2   22 2111   1  23567887776 99999999976 42     2


Q ss_pred             CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------
Q psy16707        226 DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------  298 (420)
Q Consensus       226 ~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------  298 (420)
                      ++.|                      +.|.|++.++.+++.++   .+ | .|++++|+|+.|..+++..|++       
T Consensus        64 ~~~i----------------------~~t~G~~~~i~~~~~~l---~~-g-~vl~~~p~y~~~~~~~~~~g~~~~~~~d~  116 (330)
T TIGR01140        64 AASV----------------------LPVNGAQEAIYLLPRLL---AP-G-RVLVLAPTYSEYARAWRAAGHEVVELPDL  116 (330)
T ss_pred             hhhE----------------------EECCCHHHHHHHHHHHh---CC-C-eEEEeCCCcHHHHHHHHHcCCEEEEeCCH
Confidence            3444                      66999999999977654   36 6 6999999999999999998875       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       117 ~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~  196 (330)
T TIGR01140       117 DRLPAALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFF  196 (330)
T ss_pred             HHHHhhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhh
Confidence                                                                                            


Q ss_pred             -----------------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 -----------------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 -----------------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                       .  ...+..++ ++..++.++..+|++    .+|.++   ++++++++|+.+.+.|++.+   
T Consensus       197 g~~G~R~G~i~~~~~~~~~l~~~~~~~~-~s~~~q~~~~~~l~~----~~~~~~---~~~~~~~~~~~l~~~L~~~~---  265 (330)
T TIGR01140       197 GLAGLRLGFVVAHPALLARLREALGPWT-VNGPARAAGRAALAD----TAWQAA---TRARLAAERARLAALLARLG---  265 (330)
T ss_pred             cCchhhhhheeCCHHHHHHHHhcCCCCC-chHHHHHHHHHHHhc----hHHHHH---HHHHHHHHHHHHHHHHHhCC---
Confidence                             0  11122333 355677777777765    356543   45899999999999999876   


Q ss_pred             CCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHH
Q psy16707        360 PWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       360 ~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI  415 (420)
                       +..+.++.|+|.|+.++  .+++++|+ ++||++.|+.          ||+++.-+ ++ +.+..++
T Consensus       266 -~~~~~~~~~~f~~~~~~~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~-~~-~~~~~~l  329 (330)
T TIGR01140       266 -GLEVVGGTALFLLVRTPDAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDE-EN-DRLEEAL  329 (330)
T ss_pred             -CceECCCCCeEEEEEcCCHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHH-HH-HHHHHhh
Confidence             23345678999998763  35567775 5799999851          99998533 33 6666654

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.20  E-value=9.7e-10  Score=110.98  Aligned_cols=201  Identities=14%  Similarity=0.129  Sum_probs=135.7

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|+|+.++  ++-|   +++.+     .+   .....|++. +.++||+++++++ |.     +++.|          
T Consensus        31 ~~~~~l~~ne--~~~~---~~~~~-----~~---~~~~~Yp~~-~~~~Lr~aia~~~-~~-----~~~~I----------   80 (354)
T PRK04635         31 RGDIWINANE--SPFN---NEYKL-----DL---ARLNRYPEC-QPPELINAYSAYA-GV-----APEQI----------   80 (354)
T ss_pred             CCcEEeeCCC--CCCC---CChhh-----hh---HHhccCCCC-CHHHHHHHHHHHh-Cc-----CHHHE----------
Confidence            4569999986  2222   22222     11   124678765 6899999999864 43     35555          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCC-CEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-KVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-d~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                  +.|.|+++++.+++..+  +.| | |.|++++|+|+.|...++..|++                    
T Consensus        81 ------------~it~Gs~~~i~~~~~~~--~~~-g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~  145 (354)
T PRK04635         81 ------------LTSRGADEAIELLIRAF--CEP-GQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQL  145 (354)
T ss_pred             ------------EEeCCHHHHHHHHHHHh--cCC-CCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHhc
Confidence                        56999999999998765  347 6 99999999999999888877654                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       146 ~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~  225 (354)
T PRK04635        146 DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGF  225 (354)
T ss_pred             cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhh
Confidence                                                                                            


Q ss_pred             ----hhh------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707        299 ----KIL------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI  368 (420)
Q Consensus       299 ----~~~------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~  368 (420)
                          ..+      .+..|+ .+...+.++...|.++.    + +.++..+++++++|+.+.+.|++.+.   +... +..
T Consensus       226 ~i~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~l~~~~----~-~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~-~~~  295 (354)
T PRK04635        226 TLANEELIEILMRVIAPYP-VPLPVSEIATQALSEAG----L-ARMKFQVLDLNAQGARLQAALSMYGG---AKVL-EGN  295 (354)
T ss_pred             hhCCHHHHHHHHhhcCCCC-CCHHHHHHHHHHHhccc----H-HHHHHHHHHHHHHHHHHHHHHHhCCC---ceEC-CCC
Confidence                001      111222 23444455555454321    2 33555667889999999999998752   4434 446


Q ss_pred             ceEEecCC-CHHHHHHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        369 GMFCYTGL-NATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       369 GmF~~~~l-~~~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~  417 (420)
                      |.|.|+.+ +.+.+.++++++||.+.+.      +  |||++  +.+.++.+.+++++
T Consensus       296 g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~  351 (354)
T PRK04635        296 GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN  351 (354)
T ss_pred             CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence            88998766 4555555668999998532      1  99987  57889999999875

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.17  E-value=2.1e-09  Score=107.71  Aligned_cols=193  Identities=14%  Similarity=0.240  Sum_probs=132.5

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      ++|||+.++  +|-|  +.++.+.+  ..+      ..|+.  |..+||+++++++ |.       ++|           
T Consensus        21 ~~i~l~~ne--~p~~--~~~~~~~~--~~~------~~yp~--~~~~Lr~~ia~~~-~~-------~~I-----------   67 (330)
T PRK05664         21 DWLDLSTGI--APWP--WPVPAIPA--DAW------ARLPE--TDDGLEAAARAYY-GA-------PQL-----------   67 (330)
T ss_pred             HheeecCCc--CCCC--CCCcccCH--HHH------HhCCC--ChHHHHHHHHHHh-CC-------CCE-----------
Confidence            579999996  3434  22222322  111      23643  4589999999976 32       234           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------------  298 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------------  298 (420)
                                 +.|.|++.++.+.+.    +.| ||+|++++|+|+.|..+++..|++                      
T Consensus        68 -----------~it~Gs~~al~~~~~----~~~-gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~v~l~  131 (330)
T PRK05664         68 -----------LPVAGSQAAIQALPR----LRA-PGRVGVLSPCYAEHAHAWRRAGHQVRELDEAEVEAALDSLDVLVVV  131 (330)
T ss_pred             -----------EECcCHHHHHHHHHH----ccC-CCEEEEcCCChHHHHHHHHHcCCeEEEechhhHhhhhcCCCEEEEe
Confidence                       669999999988753    347 999999999999999999999885                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       132 nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~  211 (330)
T PRK05664        132 NPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALL  211 (330)
T ss_pred             CCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHH
Confidence                                                                                            


Q ss_pred             hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCc--eEEec
Q psy16707        299 KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG--MFCYT  374 (420)
Q Consensus       299 ~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~G--mF~~~  374 (420)
                      ..+  .+..|+ .+...+.++..+|+++    +|.   +.++.+++++|+.+.+.|++.|.       .+..|  +|.|+
T Consensus       212 ~~~~~~~~~~~-~~~~~~~~~~~~L~~~----~~~---~~~~~~~~~~r~~l~~~L~~~~~-------~~~~~~~~f~~~  276 (330)
T PRK05664        212 RALAELLGPWT-VSGPTRWLAQAALADT----PWQ---RRQRERLLAASQRLAALLRRHGL-------TPAGGCALFQWV  276 (330)
T ss_pred             HHHHHhcCCCC-CCHHHHHHHHHHHhCh----HHH---HHHHHHHHHHHHHHHHHHHHCCC-------cccCCcceEEEE
Confidence            111  122233 3556677777777653    333   45678999999999999998872       23445  78887


Q ss_pred             CC-CHHHHHHHHHhCCeEEeCC-----CcEEEcccCCCCHHHHHHHHHHH
Q psy16707        375 GL-NATQVEKLIKEHSVYLTKD-----GRISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       375 ~l-~~~~v~~Ll~e~~Vy~~p~-----gRis~agl~~~ni~~la~AI~~v  418 (420)
                      .+ +.+.+...+.++||.+..-     -||++++ +.++.+.+.+++.+.
T Consensus       277 ~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~  325 (330)
T PRK05664        277 RTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAY  325 (330)
T ss_pred             ecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence            65 4444544457889999652     2999885 556799999998765

>KOG0634|consensus

Probab=99.14  E-value=2.3e-09  Score=109.76  Aligned_cols=195  Identities=16%  Similarity=0.143  Sum_probs=143.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHcC--CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707        196 DKEYAPIIGAPDFGKLAAQLAYG--EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP  273 (420)
Q Consensus       196 ~~~Y~p~~G~~~fr~a~~~~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p  273 (420)
                      .-.|.+..|+++++.-+.+ ..+  .+.+...+                      -+++.|.|-|.++..+.+.+  +++
T Consensus        93 alQYg~s~G~peLl~fik~-h~~~~ih~p~~~~----------------------wdiiit~G~t~~l~~~l~~~--~N~  147 (472)
T KOG0634|consen   93 ALQYGQSSGIPELLLFIKD-HNRPTIHAPPYKN----------------------WDIIITNGNTDGLFKVLRTL--INR  147 (472)
T ss_pred             hhccccccCcHHHHHHHHH-hccccccCCCCCC----------------------ceEEEecCCchHHHHHHHHh--hcC
Confidence            4589999999999998887 333  12232222                      24578999999999999876  557


Q ss_pred             CCCEEEEcCCCCCCcHHHHhhcCcc-------------------------------------------------------
Q psy16707        274 GEKVIYVPTPTWGNHIPICKHTGLE-------------------------------------------------------  298 (420)
Q Consensus       274 ~gd~VlvpdP~w~ny~~i~~~aG~~-------------------------------------------------------  298 (420)
                       ||.|+|-.++|+.-..-.+..|++                                                       
T Consensus       148 -gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~err  226 (472)
T KOG0634|consen  148 -GDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERR  226 (472)
T ss_pred             -CCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHH
Confidence             999999999999887777777754                                                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       227 k~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~i  306 (472)
T KOG0634|consen  227 KKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWI  306 (472)
T ss_pred             HHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEe
Confidence                                                                                            


Q ss_pred             ----------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CcccCCC
Q psy16707        299 ----------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP-WNHITDQ  367 (420)
Q Consensus       299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~-w~~i~~q  367 (420)
                                ...+-.+.+.|....|-||..+|.. -..+-|.+.+.+++.-|..||+.+.++|.+. .|.. ++..++.
T Consensus       307 t~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~-wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky-lp~~~~~~~~P~  384 (472)
T KOG0634|consen  307 TGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKR-WGQEGFLRWIQHLRSSYTERRNALLSALDKY-LPKSVCEYHPPK  384 (472)
T ss_pred             ecCHHHHHHHhhhcceeecCcccccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeEEecCC
Confidence                      3334456778899999999887742 1223355667777799999999999999986 4554 7888999


Q ss_pred             CceEEecCCC-------------HHHHHHHHHhCCeEEeCCC---------------cEEEcccCCCCHHHHHHHHHHH
Q psy16707        368 IGMFCYTGLN-------------ATQVEKLIKEHSVYLTKDG---------------RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       368 ~GmF~~~~l~-------------~~~v~~Ll~e~~Vy~~p~g---------------Ris~agl~~~ni~~la~AI~~v  418 (420)
                      .|||.|+.++             ++.+...+.|+||++++|-               |+++|....++++.=.+-+..|
T Consensus       385 aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~  463 (472)
T KOG0634|consen  385 AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSV  463 (472)
T ss_pred             cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHH
Confidence            9999998664             2455677889999999873               7777766665555444444433

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.10  E-value=2.6e-09  Score=108.56  Aligned_cols=180  Identities=16%  Similarity=0.211  Sum_probs=127.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC
Q psy16707        196 DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE  275 (420)
Q Consensus       196 ~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g  275 (420)
                      ...|... +.++||+++++++ |.     ++++|                      +.|.|+++++.+++..+  +.| |
T Consensus        53 ~~~Y~~~-~~~~lr~~ia~~~-~~-----~~~~I----------------------~~t~G~~~~l~~~~~~~--~~~-g  100 (364)
T PRK04781         53 TRRYPDP-QPPGLRSALAALY-GC-----APEQL----------------------LIGRGSDEAIDLLVRAL--CVP-G  100 (364)
T ss_pred             hccCCCC-CHHHHHHHHHHHh-Cc-----ChHHE----------------------EEeCCHHHHHHHHHHHh--cCC-C
Confidence            4568755 4799999999976 32     34455                      56999999999998755  347 7


Q ss_pred             -CEEEEcCCCCCCcHHHHhhcCcc--------------------------------------------------------
Q psy16707        276 -KVIYVPTPTWGNHIPICKHTGLE--------------------------------------------------------  298 (420)
Q Consensus       276 -d~VlvpdP~w~ny~~i~~~aG~~--------------------------------------------------------  298 (420)
                       |.|++++|+|+.|...++..|++                                                        
T Consensus       101 ~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~  180 (364)
T PRK04781        101 RDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQA  180 (364)
T ss_pred             CCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHh
Confidence             89999999999999887766543                                                        


Q ss_pred             -------------------------------------------------------------hhhhhhccCCCchHHHHHH
Q psy16707        299 -------------------------------------------------------------KILIRAFYSSPPIHGARIV  317 (420)
Q Consensus       299 -------------------------------------------------------------~~~~r~~~s~pp~~ga~iv  317 (420)
                                                                                   ....+..| +.+..++.++
T Consensus       181 ~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~-~~~~~~~~~a  259 (364)
T PRK04781        181 LQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY-PVPTPCAALA  259 (364)
T ss_pred             CCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-CCCHHHHHHH
Confidence                                                                         11113333 3466677777


Q ss_pred             HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-HHHHHHHHHhCCeEEeCC-
Q psy16707        318 QEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD-  395 (420)
Q Consensus       318 ~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-  395 (420)
                      ..+|++.    .|... .+...+++++|+.+.+.|++++  + +..+.++.|+|.|+.++ .+++...+.++||.+.|+ 
T Consensus       260 ~~~l~~~----~~~~~-~~~~~~~~~~r~~l~~~L~~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~  331 (364)
T PRK04781        260 EQALSAP----ALAVT-ARRVAEVRAERERLHAALAQLP--G-VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQR  331 (364)
T ss_pred             HHHHhcc----cHHHH-HHHHHHHHHHHHHHHHHHHhCC--C-CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCC
Confidence            7777663    23222 2333568999999999999873  1 44456788999998764 445544457899999774 


Q ss_pred             ------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707        396 ------G--RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       396 ------g--Ris~agl~~~ni~~la~AI~~v  418 (420)
                            +  ||+++  +.+..+++.+|++++
T Consensus       332 ~~~~~~~~~Ris~~--~~~~~~~l~~al~~~  360 (364)
T PRK04781        332 AAPRLSDALRITLG--TPEQNDRVLAALQRT  360 (364)
T ss_pred             CCCCCCCeEEEeCC--CHHHHHHHHHHHHHH
Confidence                  1  99987  467788999999875

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.06  E-value=1e-08  Score=103.40  Aligned_cols=198  Identities=15%  Similarity=0.214  Sum_probs=134.6

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||+..+  +|-|  ++++.+..  ..      ...|+.. - .+||+++++++ |..    .+++|          
T Consensus        24 ~~~i~ls~Ne--np~~--~~~~~~~~--~~------~~~Yp~~-~-~~L~~~ia~~~-~~~----~~~~I----------   74 (339)
T PRK06959         24 DAWLDLSTGI--NPHG--YPVPPVPA--DA------WRRLPED-D-DGLAACAARYY-GAP----DAAHV----------   74 (339)
T ss_pred             hhhceeccCC--CCCC--CCCCCCCH--HH------HHhCCCc-h-HHHHHHHHHHh-CCC----CcccE----------
Confidence            3569999887  4544  22122211  11      2347643 3 89999999966 432    13445          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|+++++.+...+   +.| |+ |++++|+|+.|...++.+|++                     
T Consensus        75 ------------~i~~Gs~e~i~~l~~~---~~~-g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~v~l~  137 (339)
T PRK06959         75 ------------LPVAGSQAAIRALPAL---LPR-GR-VGIAPLAYSEYAPAFARHGHRVVPLDEAADTLPAALTHLIVV  137 (339)
T ss_pred             ------------EECcCHHHHHHHHHHh---cCC-Ce-EEEcCCCcHHHHHHHHHCCCEEEeecccchhccccCCEEEEe
Confidence                        5699999999876543   346 66 889999999999999988875                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       138 nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li  217 (339)
T PRK06959        138 NPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALL  217 (339)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHH
Confidence                                                                                            


Q ss_pred             --hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC
Q psy16707        299 --KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL  376 (420)
Q Consensus       299 --~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l  376 (420)
                        ....+..|+ .+...|.++..+|++    .+|.+   .++++++++|+.+.+.|+++|    +...  ..|+|.|+.+
T Consensus       218 ~~l~~~~~~~~-vs~~~q~a~~~~L~~----~~~~~---~~~~~~~~~r~~l~~~L~~~g----~~~~--~~~~f~~~~~  283 (339)
T PRK06959        218 AALRDALGAWT-VSGPARHAVRAAFAD----AAWQA---AMRERLAADGARLAALLRAHG----FAVH--ATPLFSWTDD  283 (339)
T ss_pred             HHHHHhcCCCC-CcHHHHHHHHHHhCc----HHHHH---HHHHHHHHHHHHHHHHHHHCC----CCcc--CcceEEEEeC
Confidence              111233444 356778888887876    35544   455899999999999999987    4333  3689999876


Q ss_pred             C-HHHH-HHHHHhCCeEEeCC-----CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        377 N-ATQV-EKLIKEHSVYLTKD-----GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       377 ~-~~~v-~~Ll~e~~Vy~~p~-----gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      + .+.+ +.| .++||.+..-     -||++++ +.+..+++.+++++++
T Consensus       284 ~~~~~l~~~l-~~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~  331 (339)
T PRK06959        284 PRAAALHAAL-ARRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECV  331 (339)
T ss_pred             CCHHHHHHHH-HhCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHH
Confidence            3 3344 555 6789999642     2999853 4567889999988764

>PRK08354 putative aminotransferase; Provisional

Probab=99.04  E-value=2.3e-08  Score=99.40  Aligned_cols=93  Identities=15%  Similarity=0.165  Sum_probs=69.0

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||+.|+  +  .  ..++.++++......  ..+.|+.   ...+++++++++ |.        +|          
T Consensus         8 ~~~i~l~~~~--n--p--~~p~~~~~a~~~~~~--~~~~yp~---~~~l~~~ia~~~-~~--------~I----------   57 (311)
T PRK08354          8 EGLIDFSASV--N--P--YPPEWLDEMFERAKE--ISGRYTY---YEWLEEEFSKLF-GE--------PI----------   57 (311)
T ss_pred             cceeEecCCC--C--C--CCCHHHHHHHHHHHH--HhhcCCC---hHHHHHHHHHHH-CC--------CE----------
Confidence            4689999995  2  2  234677777766543  2456753   467899999875 31        23          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                  +.|.|+++++.+.+.++   .| ||+|++++|+|+.|..+++..|++
T Consensus        58 ------------~vt~G~~~al~~~~~~~---~~-gd~vlv~~P~y~~~~~~~~~~g~~  100 (311)
T PRK08354         58 ------------VITAGITEALYLIGILA---LR-DRKVIIPRHTYGEYERVARFFAAR  100 (311)
T ss_pred             ------------EECCCHHHHHHHHHHhh---CC-CCeEEEeCCCcHHHHHHHHHcCCE
Confidence                        67999999999877533   37 899999999999999999999875

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.00  E-value=1.3e-08  Score=102.02  Aligned_cols=82  Identities=17%  Similarity=0.117  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-C-HHHHHHHHHhCCeEEeCC--------C--cE
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-N-ATQVEKLIKEHSVYLTKD--------G--RI  398 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~-~~~v~~Ll~e~~Vy~~p~--------g--Ri  398 (420)
                      ...++.+++.++++|+.+.+.|++.|    |..+.++.|+|+|+.+ + .++++.|+ ++||.+.|+        +  ||
T Consensus       238 ~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~g~f~~~~~~~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRi  312 (332)
T PRK06425        238 DYVAKHSLDIMENERSYLINNLEAMG----FRAAGDPSANFITFMIPDAHDFYSYLL-KNGILVRLLDDYECLGEQYIRI  312 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCCceEEEEEcCCHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEE
Confidence            34456778999999999999999886    6655566789998765 3 35556775 579999874        1  89


Q ss_pred             EEcccCCCCHHHHHHHHHHHh
Q psy16707        399 SMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~agl~~~ni~~la~AI~~vv  419 (420)
                      +++  +.+..+++.+|+.+++
T Consensus       313 s~~--~~~~~~~l~~al~~~~  331 (332)
T PRK06425        313 AIR--RRSFNIKLVNALRNFL  331 (332)
T ss_pred             EeC--CHHHHHHHHHHHHHHh
Confidence            987  4578889999998764

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=98.97  E-value=3.4e-08  Score=103.38  Aligned_cols=104  Identities=14%  Similarity=0.081  Sum_probs=72.8

Q ss_pred             HccCCCCceeecccccccCCCCCCch---HHH-HHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCcee
Q psy16707        155 KKDTNVNKINLGVGAYRDDQGKPYVL---PSV-KQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLIS  230 (420)
Q Consensus       155 ~~d~~~~kInL~iG~y~d~dg~~~~~---~~V-~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~  230 (420)
                      -++.+.+.++|..|.   +--++.+.   ..+ .++...+. . .+..|++..|.++|++++++++ |..       .+ 
T Consensus         6 l~~~g~n~~~l~~~~---v~iDlltds~t~ams~~~~~a~~-~-gd~~Y~~~~g~~~Leeaia~~~-g~~-------~v-   71 (431)
T cd00617           6 LKEAGYNVFLLRSED---VYIDLLTDSGTGAMSDYQWAAMM-L-GDEAYAGSKSFYDLEDAVQDLF-GFK-------HI-   71 (431)
T ss_pred             HHHcCCCEEeCCCCC---cCCCCCCCCCcHHHHHHHHHHHH-h-CCCccCCCCCHHHHHHHHHHHH-CCC-------eE-
Confidence            345677889999884   30112222   233 22233332 2 4456999999999999999976 542       22 


Q ss_pred             eecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                                           +.|.|||.|+.+++..+  +.| ||+| +|+|+|+.|...+..+|+
T Consensus        72 ---------------------v~t~~Gt~Al~la~~al--~~p-GD~V-~~~~~f~~~~~~i~~~Ga  113 (431)
T cd00617          72 ---------------------IPTHQGRGAENILFSIL--LKP-GRTV-PSNMHFDTTRGHIEANGA  113 (431)
T ss_pred             ---------------------EEcCCHHHHHHHHHHHh--CCC-CCEE-ccCCcccchHHHHHhCCC
Confidence                                 67999999999987644  568 9988 799999999888777764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=98.95  E-value=1e-07  Score=97.46  Aligned_cols=208  Identities=16%  Similarity=0.161  Sum_probs=150.5

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      ++.|+|+..+  +|-|   +++.++++......  ..+.|+.. ...++++++++++-+.     .+++|          
T Consensus        22 ~~~i~LssNe--nP~g---p~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~~~-----~~~~V----------   78 (356)
T COG0079          22 PGIIKLSSNE--NPYG---PPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYGVV-----DPENV----------   78 (356)
T ss_pred             ccceeecCCC--CCCC---CCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhCCC-----CcceE----------
Confidence            3689999885  2322   33666666665543  46788766 8999999999977432     24555          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.+.|.++.+.+....+  +.| ||+|+++.|+|+-|...++.+|++                     
T Consensus        79 ------------~~gnGsde~i~~l~~~~--~~~-gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~  143 (356)
T COG0079          79 ------------LVGNGSDELIELLVRAF--VEP-GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIR  143 (356)
T ss_pred             ------------EEcCChHHHHHHHHHHh--hcC-CCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhh
Confidence                        56999999999998865  447 899999999999999999999864                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       144 ~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy  223 (356)
T COG0079         144 DKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGY  223 (356)
T ss_pred             cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceee
Confidence                                                                                            


Q ss_pred             ----------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC
Q psy16707        299 ----------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI  368 (420)
Q Consensus       299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~  368 (420)
                                ...+|.-|+. +..++.++...|.|.       +++++.++++..-|+.+.+.|+++|.    ..+.+..
T Consensus       224 ~ia~~~~i~~l~~vr~p~~v-~~~a~~aa~aal~~~-------~~~~~~~~~~~~~r~rl~~~l~~~~~----~~v~pS~  291 (356)
T COG0079         224 AIANPELIAALNKVRPPFNV-SSPALAAAIAALRDA-------DYLEESVERIREERERLYAALKALGL----FGVFPSQ  291 (356)
T ss_pred             ccCCHHHHHHHHHhcCCCCC-CHHHHHHHHHHcccH-------HHHHHHHHHHHHHHHHHHHHHHhCCC----CeecCCC
Confidence                      3344666665 666777777667652       45566668999999999999999872    3244455


Q ss_pred             ceEEecCCC---HHHHHHHHHhCCeEEeCC---------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        369 GMFCYTGLN---ATQVEKLIKEHSVYLTKD---------GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       369 GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~---------gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      +-|.++..+   ...+...+.++||.+-..         -||++. ..++| +.+.+|+.+++
T Consensus       292 aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg-t~een-~~ll~AL~~~~  352 (356)
T COG0079         292 ANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITVG-TPEEN-DRLLAALREVL  352 (356)
T ss_pred             CcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC-CHHHH-HHHHHHHHHHH
Confidence            889987664   224444446779998432         299986 55555 99999999875

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=98.93  E-value=4.7e-08  Score=99.89  Aligned_cols=83  Identities=17%  Similarity=0.290  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-CCCCceEEecCC-----CHHHHHHHHHhCCeEEeC------------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYTGL-----NATQVEKLIKEHSVYLTK------------  394 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-~~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p------------  394 (420)
                      +.+..+++++++|+.+.+.|++.|    |..+ .++.++|.|+.+     +.+++..+++++||++.+            
T Consensus       276 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~  351 (402)
T cd00378         276 EFKAYAKQVVENAKALAEALKERG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFV  351 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCC
Confidence            455666889999999999999887    5544 346788888644     346666677899999952            


Q ss_pred             --CCcEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707        395 --DGRISMAGV-----TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 --~gRis~agl-----~~~ni~~la~AI~~vv  419 (420)
                        +-||++..+     +.+++++++++|.+++
T Consensus       352 ~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~  383 (402)
T cd00378         352 PSGIRIGTPAMTTRGMGEEEMEEIADFIARAL  383 (402)
T ss_pred             CCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence              128888765     4899999999999865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=98.93  E-value=5.3e-08  Score=98.47  Aligned_cols=176  Identities=16%  Similarity=0.180  Sum_probs=120.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC
Q psy16707        196 DKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE  275 (420)
Q Consensus       196 ~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g  275 (420)
                      ...|+.. -..+++++++++ +|.     ++++|                      +.|.|+++++.+++..+  +.| |
T Consensus        51 ~~~Yp~~-~~~~l~~~~a~~-~g~-----~~~~I----------------------~~~~Gs~e~i~~~~~~~--~~~-g   98 (351)
T PRK01688         51 LNRYPEC-QPKAVIENYAAY-AGV-----KPEQV----------------------LVSRGADEGIELLIRAF--CEP-G   98 (351)
T ss_pred             cccCCCC-ChHHHHHHHHHH-hCC-----CHHHE----------------------EEcCCHHHHHHHHHHHh--cCC-C
Confidence            4567544 348999999987 453     34555                      56999999999998755  346 6


Q ss_pred             -CEEEEcCCCCCCcHHHHhhcCcc--------------------------------------------------------
Q psy16707        276 -KVIYVPTPTWGNHIPICKHTGLE--------------------------------------------------------  298 (420)
Q Consensus       276 -d~VlvpdP~w~ny~~i~~~aG~~--------------------------------------------------------  298 (420)
                       |.|++++|+|+.|...++..|++                                                        
T Consensus        99 ~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~  178 (351)
T PRK01688         99 KDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKA  178 (351)
T ss_pred             CCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc
Confidence             89999999999999999888864                                                        


Q ss_pred             --------------------------------------------------hhh------hhhccCCCchHHHHHHHHHhC
Q psy16707        299 --------------------------------------------------KIL------IRAFYSSPPIHGARIVQEILG  322 (420)
Q Consensus       299 --------------------------------------------------~~~------~r~~~s~pp~~ga~iv~~IL~  322 (420)
                                                                        ..+      .+..|+ .+...+.++..+|.
T Consensus       179 ~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~-v~~~~~~~a~~~L~  257 (351)
T PRK01688        179 IVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP-LSTPVADIAAQALS  257 (351)
T ss_pred             EEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCCC-CCHHHHHHHHHHHh
Confidence                                                              111      122233 34455655655565


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCC-----
Q psy16707        323 DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKD-----  395 (420)
Q Consensus       323 dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~-----  395 (420)
                      +..     .+.++..++.+.+.|+.+.+.|++++.   +..+.++.|.|.|+.++  ++..++|+ ++||.+.+.     
T Consensus       258 ~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ps~~nfi~~~~~~~~~l~~~L~-~~gi~vr~~~~~~~  328 (351)
T PRK01688        258 PQG-----IAAMRERVAEINANRQWLIAALKEIPC---VEQVFDSETNYILARFTASSAVFKSLW-DQGIILRDQNKQPG  328 (351)
T ss_pred             cch-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHH-HCCeEEEECCCcCC
Confidence            421     133455557788889999999988742   44355678999997654  34456664 789999642     


Q ss_pred             --C--cEEEcccCCCCHHHHHHHH
Q psy16707        396 --G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       396 --g--Ris~agl~~~ni~~la~AI  415 (420)
                        +  ||++.  +.+..+.+.++|
T Consensus       329 ~~~~iRis~~--~~~e~~~l~~al  350 (351)
T PRK01688        329 LSNCLRITIG--TREECQRVIDAL  350 (351)
T ss_pred             CCCeEEEeCC--CHHHHHHHHHhh
Confidence              1  99987  457788888776

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=98.91  E-value=1.5e-07  Score=95.76  Aligned_cols=102  Identities=15%  Similarity=0.063  Sum_probs=71.5

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC---CC----HHHHHHHHHHHcCCCCccccCCcee
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII---GA----PDFGKLAAQLAYGEDCPQLKDNLIS  230 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~---G~----~~fr~a~~~~~~g~~~~~~~~~~i~  230 (420)
                      .+.+.||++.|.|.   | ....|.|+++......+ ....|.+..   |.    +++++++++++ |.+       .+ 
T Consensus        36 ~g~~~i~~~~~~~l---g-~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le~~ia~~~-g~~-------~~-  101 (393)
T TIGR01822        36 DGREVLNFCANNYL---G-LSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELEAKIAAFL-GTE-------DT-  101 (393)
T ss_pred             CCceEEEeeCCCcc---c-cCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHHHHHHHHh-CCC-------cE-
Confidence            34578999999875   4 33455555555554433 234777777   97    88999999876 332       12 


Q ss_pred             eecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                                           +.+.||+.|+..++..+  +.| ||.|++++|+|+.+...++.++.
T Consensus       102 ---------------------ii~~~~~~a~~~~~~~l--~~~-gd~vi~~~~~~~s~~~~~~~~~~  144 (393)
T TIGR01822       102 ---------------------ILYASCFDANGGLFETL--LGA-EDAIISDALNHASIIDGVRLCKA  144 (393)
T ss_pred             ---------------------EEECchHHHHHHHHHHh--CCC-CCEEEEeccccHHHHHHHHhcCC
Confidence                                 55789998888766544  567 99999999999999887666543

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=98.89  E-value=1.4e-07  Score=95.62  Aligned_cols=80  Identities=18%  Similarity=0.285  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-CC---CHHHHHHHHHhCCeEEeCC-------C----cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-GL---NATQVEKLIKEHSVYLTKD-------G----RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-~l---~~~~v~~Ll~e~~Vy~~p~-------g----Ris  399 (420)
                      +.++++++++|+.+.+.|++.|    |+......++|.+. +-   +.++++.|+++ ||.+.++       +    ||+
T Consensus       296 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~  370 (397)
T PRK06939        296 DELRDRLWENARYFREGMTAAG----FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQ  370 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEE
Confidence            4677899999999999999887    44444445555432 21   23556777655 9998642       1    888


Q ss_pred             Ecc-cCCCCHHHHHHHHHHHh
Q psy16707        400 MAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       400 ~ag-l~~~ni~~la~AI~~vv  419 (420)
                      ++. .+++.++++.++|++++
T Consensus       371 ~~~~~~~~~i~~~l~~L~~~~  391 (397)
T PRK06939        371 MSAAHTKEQLDRAIDAFEKVG  391 (397)
T ss_pred             ECCCCCHHHHHHHHHHHHHHH
Confidence            875 68888999999988775

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=98.77  E-value=3.5e-08  Score=89.44  Aligned_cols=115  Identities=14%  Similarity=0.169  Sum_probs=78.8

Q ss_pred             ccCCChHHHHHHHHHccC-----CC-Cceeecccc----------cc--cCCCCCCchHHHHHHHHHHHccCCCCCCCCC
Q psy16707        141 SVKVPSSNLLTEAFKKDT-----NV-NKINLGVGA----------YR--DDQGKPYVLPSVKQADEIVLNKNLDKEYAPI  202 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~d~-----~~-~kInL~iG~----------y~--d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~  202 (420)
                      +....|.|.--+++.+++     ++ .+|+||+-+          |.  +++.++.+++.|.++...+      ..|.+.
T Consensus        18 ~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~   91 (153)
T PLN02994         18 HGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDY   91 (153)
T ss_pred             CCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCC
Confidence            445667777777777764     33 366666652          11  1224455666655544443      349999


Q ss_pred             CCCHHHHHHHHHHHcCCCC--ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707        203 IGAPDFGKLAAQLAYGEDC--PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV  280 (420)
Q Consensus       203 ~G~~~fr~a~~~~~~g~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv  280 (420)
                      .|.++||+|+++++-...+  ..+++++|                      +.|.|++.++.+++..|  +.| ||.|+|
T Consensus        92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~I----------------------vvt~Ga~~al~~l~~~l--~dp-GD~VlV  146 (153)
T PLN02994         92 HGLANFRKAIANFMAEARGGRVKFDADMI----------------------VLSAGATAANEIIMFCI--ADP-GDAFLV  146 (153)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCccchhhe----------------------EEcCCHHHHHHHHHHHH--cCC-CCEEEE
Confidence            9999999999999944332  22445555                      67999999999988755  558 999999


Q ss_pred             cCCCCC
Q psy16707        281 PTPTWG  286 (420)
Q Consensus       281 pdP~w~  286 (420)
                      |+|+|+
T Consensus       147 p~P~Y~  152 (153)
T PLN02994        147 PTPYYA  152 (153)
T ss_pred             eCCCCC
Confidence            999997

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=98.69  E-value=1.8e-06  Score=87.51  Aligned_cols=107  Identities=14%  Similarity=0.033  Sum_probs=70.0

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGI  235 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~  235 (420)
                      .+.+.|||+.|.+.   | .+..+.++++......+.  ....|.+..|.+++++++++++....+.   ++.       
T Consensus        31 ~g~~~id~~~~~~~---g-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~-------   96 (385)
T TIGR01825        31 NGKEVINLSSNNYL---G-FADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAA-------   96 (385)
T ss_pred             CCceEEEeeccCcc---C-CCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcE-------
Confidence            35678999998532   3 445556655555544321  2346888999999999999988432211   121       


Q ss_pred             CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                                      +..++|+.+...++..+  +.| ||.|++++|+|+++...++..|.
T Consensus        97 ----------------i~~~sG~~a~~~a~~~~--~~~-gd~vi~~~~~~~~~~~~~~~~g~  139 (385)
T TIGR01825        97 ----------------LVFQSGFNTNQGVLSAL--LRK-GDIVLSDELNHASIIDGLRLTKA  139 (385)
T ss_pred             ----------------EEECcHHHHHHHHHHHh--CCC-CCEEEEEccccHHHHHHHHhcCC
Confidence                            23445576666555433  557 99999999999999877666654

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=98.64  E-value=2.3e-06  Score=85.21  Aligned_cols=77  Identities=17%  Similarity=0.341  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeC-------CC----
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG----  396 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p-------~g----  396 (420)
                      +.+.++++++++|+.+.+.|+++|    +... ++.|.|.|+.++    . ++.++| .++||++.+       .|    
T Consensus       266 ~~~~~~~~~~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~i  339 (360)
T TIGR00858       266 EEPWRREKLLALIARLRAGLEALG----FTLM-PSCTPIVPVIIGDNASALALAEEL-QQQGIFVGAIRPPTVPAGTSRL  339 (360)
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHcC----CccC-CCCCCEEEEEeCCHHHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceE
Confidence            345677899999999999999876    4433 456777765442    2 455666 577999964       12    


Q ss_pred             cEEEcc-cCCCCHHHHHHHH
Q psy16707        397 RISMAG-VTSKNVGYLAKAI  415 (420)
Q Consensus       397 Ris~ag-l~~~ni~~la~AI  415 (420)
                      ||++.. .+.++++.+.++|
T Consensus       340 Ris~~~~~~~~~i~~~l~~l  359 (360)
T TIGR00858       340 RLTLSAAHTPGDIDRLAEAL  359 (360)
T ss_pred             EEEEcCCCCHHHHHHHHHhh
Confidence            899885 3777888888775

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PLN02721 threonine aldolase

Probab=98.58  E-value=2.8e-06  Score=84.71  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecC------CCH-HHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCH
Q psy16707        342 ISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG------LNA-TQVEKLIKEHSVYLTKDG----RISMA-GVTSKNV  408 (420)
Q Consensus       342 ~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~------l~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni  408 (420)
                      .++++.+.+.|++++.   +.. +.++.+.|.|+.      .+. +++++| .++||++.|++    ||++. ..+.+++
T Consensus       264 ~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~v~~~~~~~lR~~~~~~~~~~~i  339 (353)
T PLN02721        264 HKKAKLLAEGLNQIKG---LRVNVAAVETNIVYFDITDGSRITAEKLCKSL-EEHGVLLMPGNSSRIRVVTHHQISDSDV  339 (353)
T ss_pred             HHHHHHHHHHHHhCCC---cEEecCCccceEEEEEccCCccccHHHHHHHH-HhCCcEEecCCCceEEEEecCcCCHHHH
Confidence            4567788999987731   321 333444556532      233 445677 59999999876    99986 6799999


Q ss_pred             HHHHHHHHHHh
Q psy16707        409 GYLAKAIHAVT  419 (420)
Q Consensus       409 ~~la~AI~~vv  419 (420)
                      +++.+++.+++
T Consensus       340 ~~~~~~l~~~~  350 (353)
T PLN02721        340 QYTLSCFQQAA  350 (353)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>PLN02822 serine palmitoyltransferase

Probab=98.50  E-value=3.9e-06  Score=89.05  Aligned_cols=81  Identities=14%  Similarity=0.213  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC-------------HHHHHHHHHhCCeEEeCC-----
Q psy16707        335 KGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN-------------ATQVEKLIKEHSVYLTKD-----  395 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~-------------~~~v~~Ll~e~~Vy~~p~-----  395 (420)
                      ..++++++++++.|.+.|++. |    |....++.+.+.++.++             .+++++|++++||+++|+     
T Consensus       367 ~~~~~~l~~~~~~l~~~L~~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~  442 (481)
T PLN02822        367 PSVLAKLKENIALLHKGLSDIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTL  442 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCc
Confidence            456789999999999999886 5    44444456666654331             356789988999999964     


Q ss_pred             --------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        396 --------GRISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------gRis~ag-l~~~ni~~la~AI~~vv  419 (420)
                              .||+++. .++++|++++++|.+++
T Consensus       443 ~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~  475 (481)
T PLN02822        443 DKCRLPVGIRLFVSAGHTESDILKASESLKRVA  475 (481)
T ss_pred             CCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHH
Confidence                    4887664 58899999999998864

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=98.49  E-value=1e-05  Score=82.35  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC-------C--cEEEc
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD-------G--RISMA  401 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~-------g--Ris~a  401 (420)
                      +.+++.++++++.+.+.++.+      ...+.+.| |.|..++    .+++..+++++||.+.|+       |  ||+++
T Consensus       253 ~~~~~~l~~r~~~~~~~l~~~------~~~~~~~~-f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~  325 (346)
T TIGR03576       253 SRIRDAFKRKEEVYLRLFDKL------NVERTPTG-FVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLA  325 (346)
T ss_pred             HHHHHHHHHHHHHHHHHHHhC------CCCcCCCe-EEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEe
Confidence            355678888888888777633      33344555 7876543    478889999999999983       2  99998


Q ss_pred             ccCCC---CHHHHHHHHHHHhC
Q psy16707        402 GVTSK---NVGYLAKAIHAVTK  420 (420)
Q Consensus       402 gl~~~---ni~~la~AI~~vv~  420 (420)
                      . .++   ..+++.++|++.++
T Consensus       326 ~-~~~~~~~~~~~~~al~~~~~  346 (346)
T TIGR03576       326 A-KDAERIGDDYLVEAVKDSLK  346 (346)
T ss_pred             c-ChHHhcCHHHHHHHHHhccC
Confidence            3 332   68999999987653

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK10534 L-threonine aldolase; Provisional

Probab=98.48  E-value=6.2e-06  Score=82.15  Aligned_cols=72  Identities=13%  Similarity=0.216  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCCC--cEEEc-ccCCCCHHHHHHHHH
Q psy16707        343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG--RISMA-GVTSKNVGYLAKAIH  416 (420)
Q Consensus       343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~g--Ris~a-gl~~~ni~~la~AI~  416 (420)
                      +.|+.+.+.|+++|    |...++ .|.|.|+.++   .+++.+++++.||.+.|+.  |++.+ .++.+.++++.++++
T Consensus       254 ~~r~~l~~~L~~~g----~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~  328 (333)
T PRK10534        254 DNAAWLAEQLREAG----ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWR  328 (333)
T ss_pred             HHHHHHHHHHHhCC----CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHH
Confidence            35778999999988    554444 6899987653   4566677789999999876  77764 578889999999998


Q ss_pred             HHh
Q psy16707        417 AVT  419 (420)
Q Consensus       417 ~vv  419 (420)
                      +.+
T Consensus       329 ~~~  331 (333)
T PRK10534        329 AFL  331 (333)
T ss_pred             HHh
Confidence            764

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=98.43  E-value=2.5e-05  Score=80.00  Aligned_cols=102  Identities=15%  Similarity=0.077  Sum_probs=67.0

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCC-------CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPII-------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~-------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      .|.|..+-.+.++.|.++....... ..+..|.+..       .++++|+++++++ |..    .++.|           
T Consensus        18 iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~----~~~~i-----------   81 (398)
T TIGR03392        18 VYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL-NAP----DAENI-----------   81 (398)
T ss_pred             EEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh-CCC----CCCeE-----------
Confidence            5666666667888888888776532 2222333322       2466889998865 532    12334           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHH--hcCCCCCEEEEcCCCCCC----cHHHHhhcCcc
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLK--NFFPGEKVIYVPTPTWGN----HIPICKHTGLE  298 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~--~~~p~gd~VlvpdP~w~n----y~~i~~~aG~~  298 (420)
                                 +.|.|+|.++.+++..+.  .+.| ||.|++++|+|+.    +..+++..|++
T Consensus        82 -----------~~t~g~t~~l~~~~~~~~~~~~~~-gd~Vl~~~~~~~s~~~~~~~~~~~~g~~  133 (398)
T TIGR03392        82 -----------VWTRGTTESINLVAQSYARPRLQP-GDEIIVSEAEHHANLIPWLMVAQQTGAK  133 (398)
T ss_pred             -----------EEeCChHHHHHHHHHHhhhccCCC-CCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence                       568999999999886553  2457 8999999999876    34455666664

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=98.39  E-value=1.7e-05  Score=80.74  Aligned_cols=105  Identities=14%  Similarity=0.096  Sum_probs=69.2

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCC-----CCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAP-----IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p-----~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~  234 (420)
                      .++++|++|.     ....+++.|.++..++ .  ..+.|+|     ..|.+++++++++++-...+.  +.+.+.    
T Consensus        20 ~~~~~l~~g~-----~~~~~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~----   85 (398)
T cd00613          20 QSMSFLGSGT-----YKHNPPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANAS----   85 (398)
T ss_pred             cCcccccccc-----cCCcCcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--Ccccee----
Confidence            3559999997     3468888888876665 2  3456777     899999999999988322211  122332    


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                                       +.+.||+++...+...+..-.+ ||+|++++|.|+.|...+..+|
T Consensus        86 -----------------~~~~g~~~~~~~~~~~~~~~~~-gd~Vl~~~~~h~~~~~~~~~~~  129 (398)
T cd00613          86 -----------------LQDEATAAAEAAGLAAIRAYHK-RNKVLVPDSAHPTNPAVARTRG  129 (398)
T ss_pred             -----------------ccCchHHHHHHHHHHHHhcccC-CCEEEEcCccCcchHHHHHHhc
Confidence                             2333554554333332222123 8999999999999998888776

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PLN02483 serine palmitoyltransferase

Probab=98.39  E-value=6.7e-06  Score=87.46  Aligned_cols=107  Identities=12%  Similarity=0.028  Sum_probs=71.3

Q ss_pred             CCCceeecccccccCC-CCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707        159 NVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGI  235 (420)
Q Consensus       159 ~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~  235 (420)
                      ....+|++-=.|..=. .++.+.+.|.+|.+..-..  ..-..|.+..+..++++++++++- ..      +.       
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~------~a-------  164 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KP------AA-------  164 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CC------cE-------
Confidence            3567898877776443 2345677888887765321  123458888899999999999874 22      21       


Q ss_pred             CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                      +...+|..+...++..+  +.| ||.|++++|+|+++...++.+|++
T Consensus       165 ----------------i~~~~G~~an~~~i~al--~~~-Gd~Vi~d~~~h~s~~~~~~~~Ga~  208 (489)
T PLN02483        165 ----------------IVFGMGYATNSTIIPAL--IGK-GGLIISDSLNHNSIVNGARGSGAT  208 (489)
T ss_pred             ----------------EEECCHHHHHHHHHHHh--CCC-CCEEEEcchhhHHHHHHHHHcCCe
Confidence                            33445555544433323  457 999999999999998777666654

>KOG0258|consensus

Probab=98.38  E-value=1.4e-05  Score=81.61  Aligned_cols=191  Identities=15%  Similarity=0.188  Sum_probs=142.7

Q ss_pred             CchHHHHHHHHHHHccC-CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeeccc
Q psy16707        178 YVLPSVKQADEIVLNKN-LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGIS  256 (420)
Q Consensus       178 ~~~~~V~~a~~~~~~~~-~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~g  256 (420)
                      .+.+++++|...+..-. ..-.|....|++-.|+.+|++.-.+|+-.-+++.|                      ..|.|
T Consensus        87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI----------------------~LT~G  144 (475)
T KOG0258|consen   87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDI----------------------FLTTG  144 (475)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHe----------------------eecCC
Confidence            56788888877664323 34589999999999999999998877643455545                      67999


Q ss_pred             chHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------------------------
Q psy16707        257 GTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------------------------  298 (420)
Q Consensus       257 Gtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------------------------  298 (420)
                      ++.|++..+.++.. .+ .+-|+||-|.||-|...+.+.|+.                                      
T Consensus       145 AS~ai~~il~l~~~-~~-~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvI  222 (475)
T KOG0258|consen  145 ASPAIRSILSLLIA-GK-KTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVI  222 (475)
T ss_pred             CcHHHHHHHHHHhc-CC-CCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEE
Confidence            99999999887754 24 789999999999999988888875                                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       223 NPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gEC  302 (475)
T KOG0258|consen  223 NPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGEC  302 (475)
T ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeee
Confidence                                                                                            


Q ss_pred             -------------------hhhhhhccCCCchHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707        299 -------------------KILIRAFYSSPPIHGARIVQEILGDPK----LKAQWLTEVKGMADRIISMRQSLKDNLQKE  355 (420)
Q Consensus       299 -------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~----L~~~w~~el~~m~~r~~~~R~~l~~~L~~~  355 (420)
                                         ....-+.--||+..||..+....+-|.    -..+|.+|.+.+...+++|...+.+.+..+
T Consensus       303 G~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~  382 (475)
T KOG0258|consen  303 GQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL  382 (475)
T ss_pred             cccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc
Confidence                               111122234678888887776665543    446788898888888888888999998876


Q ss_pred             CCCCCCcccCCCCceEEec---------------CCC-HHH-HHHHHHhCCeEEeCC
Q psy16707        356 GSNKPWNHITDQIGMFCYT---------------GLN-ATQ-VEKLIKEHSVYLTKD  395 (420)
Q Consensus       356 g~~~~w~~i~~q~GmF~~~---------------~l~-~~~-v~~Ll~e~~Vy~~p~  395 (420)
                      ..   ...-+.|+.||.|-               ++. ++| +.+|++..||-++||
T Consensus       383 ~g---i~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPG  436 (475)
T KOG0258|consen  383 EG---ISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPG  436 (475)
T ss_pred             Cc---eeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecC
Confidence            42   34456678888872               221 244 589999999999997

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=98.36  E-value=3.6e-05  Score=78.89  Aligned_cols=99  Identities=17%  Similarity=0.105  Sum_probs=66.6

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC-----------CCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII-----------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~-----------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      .|.|..+..+.++.|.++......+.   ...|..           .++++|+++++++ |..    +++.|        
T Consensus        21 ~yld~a~~~~~~~~v~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~----~~~~i--------   84 (401)
T PRK10874         21 VYLDSAATALKPQAVIEATQQFYSLS---AGNVHRSQFAAAQRLTARYEAAREQVAQLL-NAP----DAKNI--------   84 (401)
T ss_pred             EEEeCCcccCCCHHHHHHHHHHHHhc---cCCCCCcccHHHHHHHHHHHHHHHHHHHHc-CCC----CCCEE--------
Confidence            57777777788889998887776431   112222           2567888888865 432    13334        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHH--hcCCCCCEEEEcCCCCCC----cHHHHhhcCcc
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLK--NFFPGEKVIYVPTPTWGN----HIPICKHTGLE  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~--~~~p~gd~VlvpdP~w~n----y~~i~~~aG~~  298 (420)
                                    +.|.|+|.++.+++..+.  .+.| ||.|++++|.|++    +....+..|++
T Consensus        85 --------------~~~~~~t~~i~~~~~~~~~~~~~~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~  136 (401)
T PRK10874         85 --------------VWTRGTTESINLVAQSYARPRLQP-GDEIIVSEAEHHANLVPWLMVAQQTGAK  136 (401)
T ss_pred             --------------EEECCHHHHHHHHHHHhhhccCCC-cCEEEECCcchHHHHHHHHHHHHHhCCE
Confidence                          568999999999886553  2356 8999999999876    34445556664

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=98.36  E-value=4.8e-05  Score=77.82  Aligned_cols=83  Identities=13%  Similarity=0.223  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-----CCceEEec--CCCHHHHHHHHHhCCeEEeCC-----------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----------  395 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-----q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~-----------  395 (420)
                      ++.+++++.+.++.+.+.|++++.   |+.+.+     +.|++.+.  +.+..++..+++++||++.++           
T Consensus       293 ~~~~~~~~~~l~~~l~~~l~~~~g---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~  369 (403)
T TIGR01979       293 LENIEAHEHELTAYALERLGEIPG---LRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRF  369 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHh
Confidence            566778899999999999987631   554433     25676653  455556656668999998642           


Q ss_pred             -----CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 -----GRISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----gRis~agl-~~~ni~~la~AI~~vv  419 (420)
                           -|||+... +.+++++++++|.+++
T Consensus       370 ~~~~~iRiS~~~~~t~~di~~l~~~l~~~~  399 (403)
T TIGR01979       370 GVPATCRASFYIYNTEEDIDALVEALKKVR  399 (403)
T ss_pred             CCCCEEEEEeccCCCHHHHHHHHHHHHHHH
Confidence                 29998744 5689999999998875

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=98.36  E-value=3.3e-05  Score=77.45  Aligned_cols=83  Identities=17%  Similarity=0.215  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---CceEEecC----CCH-HHHHHHHHhCCeEEeCC------C--c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYTG----LNA-TQVEKLIKEHSVYLTKD------G--R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~GmF~~~~----l~~-~~v~~Ll~e~~Vy~~p~------g--R  397 (420)
                      ++.+.++..++++.+.+.|++.|    |..+.++   .+++.|..    .+. +.++.|.+++||++.++      +  |
T Consensus       257 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iR  332 (356)
T cd06451         257 LENRWARHRRLAKALREGLEALG----LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFR  332 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEE
Confidence            45556788888999999999877    4433322   34544432    233 55677876679999864      1  9


Q ss_pred             EEEccc-CCCCHHHHHHHHHHHhC
Q psy16707        398 ISMAGV-TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       398 is~agl-~~~ni~~la~AI~~vv~  420 (420)
                      |+++.. +++.++++.++++++++
T Consensus       333 is~~~~~~~e~v~~~~~~l~~~~~  356 (356)
T cd06451         333 IGHMGEATREDVLGVLSALEEALK  356 (356)
T ss_pred             EecCCCCCHHHHHHHHHHHHHHhC
Confidence            998755 68999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=98.34  E-value=2.7e-05  Score=78.73  Aligned_cols=83  Identities=16%  Similarity=0.230  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhCCeEEeCCC----cEEEcc-cCCCCH
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKDG----RISMAG-VTSKNV  408 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~~~ni  408 (420)
                      .+.++++++|+.+.+.|++.+....+..+ ...|.|.|+.+  +.+++...+.+.||++.|.+    ||+++. .+++++
T Consensus       290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i  368 (379)
T TIGR00707       290 RLLENVKEKGDYFKERLEELGKNYPNKEV-RGKGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEI  368 (379)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCCCcc-ccCceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHH
Confidence            35567777777787777766433223222 24677776544  34444334578899999864    888764 789999


Q ss_pred             HHHHHHHHHHh
Q psy16707        409 GYLAKAIHAVT  419 (420)
Q Consensus       409 ~~la~AI~~vv  419 (420)
                      +++.++|.+++
T Consensus       369 ~~~~~~l~~~~  379 (379)
T TIGR00707       369 DEAVSALEEAI  379 (379)
T ss_pred             HHHHHHHHHhC
Confidence            99999998764

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=98.29  E-value=4e-05  Score=77.23  Aligned_cols=79  Identities=16%  Similarity=0.263  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-------C----cE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-------G----RI  398 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-------g----Ri  398 (420)
                      +.+.+++.++++.+.+.|++.|    ++.+.+ .|.|.++.++    . +++++| .++||.+.+.       |    ||
T Consensus       290 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRi  363 (385)
T PRK05958        290 PERRERLAALIARLRAGLRALG----FQLMDS-QSAIQPLIVGDNERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRI  363 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCcCCC-CCCEEEEEeCCHHHHHHHHHHH-HHCCceEecccCCCCCCCCceEEE
Confidence            4567889999999999999887    454444 4555554332    2 455677 5679999741       2    99


Q ss_pred             EEcc-cCCCCHHHHHHHHHHHh
Q psy16707        399 SMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +++. .+.++++.+.++|.+++
T Consensus       364 s~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        364 TLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             EecCCCCHHHHHHHHHHHHhcC
Confidence            9963 58999999999998763

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=98.27  E-value=4.3e-05  Score=77.77  Aligned_cols=105  Identities=15%  Similarity=0.115  Sum_probs=69.4

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccC-----CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcccc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKN-----LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRV  243 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-----~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~  243 (420)
                      .|.|..+..++++.|.++......+.     ..+.|. ..+.+.++++.++++-+...  .+++.|              
T Consensus         1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~~~~--~~~~~i--------------   63 (382)
T TIGR03403         1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKGINA--RDLDDI--------------   63 (382)
T ss_pred             CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHHcCc--CCCCeE--------------
Confidence            37888888999999999998866431     112232 45678899999888733221  123444              


Q ss_pred             ccccccceeecccchHHHHHHHHHHHh--c-CCCCCEEEEcCCCCCCcHHHH---hhcCcc
Q psy16707        244 GAAFQISIVQGISGTGSLRVGAAFLKN--F-FPGEKVIYVPTPTWGNHIPIC---KHTGLE  298 (420)
Q Consensus       244 ~~~~~~~~vqt~gGtgal~~~~~~l~~--~-~p~gd~VlvpdP~w~ny~~i~---~~aG~~  298 (420)
                              +.|.|+|+++.+++..+..  + .+.++.|+++++.||.|....   +..|++
T Consensus        64 --------~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~  116 (382)
T TIGR03403        64 --------IITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVE  116 (382)
T ss_pred             --------EEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCE
Confidence                    6699999999987764311  1 342478999998888776543   344554

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=98.25  E-value=0.0001  Score=73.23  Aligned_cols=80  Identities=19%  Similarity=0.222  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC----CCHH-HHHHHHHhCCeEEeCC---------C--c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG----LNAT-QVEKLIKEHSVYLTKD---------G--R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~----l~~~-~v~~Ll~e~~Vy~~p~---------g--R  397 (420)
                      .+.+++++.++++.+.+.|++.|    |..+..+.+++.+.-    .+.+ +.+.|. +.||.+.++         +  |
T Consensus       252 ~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~~~~~~~~~~~~iR  326 (349)
T cd06454         252 GPERRERLQENVRYLRRGLKELG----FPVGGSPSHIIPPLIGDDPAKAVAFSDALL-ERGIYVQAIRYPTVPRGTARLR  326 (349)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcC----CcccCCCCCcEEEEeCCChHHHHHHHHHHH-hCCceEEEecCCccCCCCCeEE
Confidence            35567889999999999999887    454445455554331    2234 446665 459999651         2  8


Q ss_pred             EEEcc-cCCCCHHHHHHHHHHH
Q psy16707        398 ISMAG-VTSKNVGYLAKAIHAV  418 (420)
Q Consensus       398 is~ag-l~~~ni~~la~AI~~v  418 (420)
                      |+++. .+.++++++.++|+++
T Consensus       327 i~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         327 ISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             EEEeCCCCHHHHHHHHHHHHHh
Confidence            99876 6899999999999875

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=98.23  E-value=0.00013  Score=75.18  Aligned_cols=84  Identities=12%  Similarity=0.215  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceEEec--CCCHHHHHHHHHhCCeEEeCC-------------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-------------  395 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~-------------  395 (420)
                      .++.+.+++++.++.+.+.|++...   +..+.  ...|++.+.  +.+.+.+...++++||.+..|             
T Consensus       298 g~~~i~~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~  374 (406)
T PRK09295        298 GLNNIAEYEQNLMHYALSQLESVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNV  374 (406)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCC
Confidence            3566678888889999999877521   33222  236777763  455566655668999988532             


Q ss_pred             ---CcEEEcccCC-CCHHHHHHHHHHHh
Q psy16707        396 ---GRISMAGVTS-KNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ---gRis~agl~~-~ni~~la~AI~~vv  419 (420)
                         .|||+.--|+ ++|+.++++|.++.
T Consensus       375 ~~~iRiS~~~ynt~~did~l~~~l~~i~  402 (406)
T PRK09295        375 PAMCRASLAMYNTHEEVDRLVAGLQRIH  402 (406)
T ss_pred             CCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence               4999987755 78999999998863

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=98.18  E-value=0.00034  Score=72.94  Aligned_cols=82  Identities=15%  Similarity=0.159  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--c--CCC-HHHHHHHHHhCCeEE----eC---C----
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--T--GLN-ATQVEKLIKEHSVYL----TK---D----  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~--~l~-~~~v~~Ll~e~~Vy~----~p---~----  395 (420)
                      +.++++++++.++|+.+.+.|++++.   +...  +.++|.+  +  +.+ .+.+++|+ ++||..    .+   +    
T Consensus       348 ~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~  421 (447)
T PRK00451        348 EGLRELAEQNHQKAHYLAERLAEIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALL-EKGILGGYDLGRYYPELGNH  421 (447)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHH-hcCCCCCcccccccCCcCCE
Confidence            34677889999999999999998742   3333  4455543  3  334 35557775 555542    11   1    


Q ss_pred             CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        396 GRISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 gRis~ag-l~~~ni~~la~AI~~vv  419 (420)
                      -|+++.. .+.+.++++.+++.+++
T Consensus       422 ~rvs~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        422 LLVCVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             EEEecCCCCCHHHHHHHHHHHHHHh
Confidence            2888764 56789999999998875

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=98.18  E-value=0.00018  Score=72.67  Aligned_cols=91  Identities=12%  Similarity=0.002  Sum_probs=59.1

Q ss_pred             cccCCCCC-CchHHHHHHHHHHHccCC-CCC---CCC----CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        170 YRDDQGKP-YVLPSVKQADEIVLNKNL-DKE---YAP----IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       170 y~d~dg~~-~~~~~V~~a~~~~~~~~~-~~~---Y~p----~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      |.|..+.+ ++++.|.++......+.. +..   |.+    ..+..++++.+++++ |..    .++.|           
T Consensus         2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~----~~~~v-----------   65 (376)
T TIGR01977         2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF-NAP----SSAHV-----------   65 (376)
T ss_pred             CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh-CcC----CCCeE-----------
Confidence            66665544 566777777766554321 222   332    256778899998865 432    12234           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                                 +.|.|||.++..++..  .+.+ ||+|++++++|+.+..
T Consensus        66 -----------~~~~g~t~al~~~~~~--~~~~-gd~vl~~~~~~~~~~~  101 (376)
T TIGR01977        66 -----------VFTNNATTALNIALKG--LLKE-GDHVITTPMEHNSVAR  101 (376)
T ss_pred             -----------EEeCCHHHHHHHHHHh--ccCC-CCEEEECcchhhHHHH
Confidence                       5688999999887653  2456 8999999999987653

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=98.15  E-value=0.00015  Score=72.10  Aligned_cols=82  Identities=18%  Similarity=0.199  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEecCC------CHHHHHHHHHhCCeEEeCCC-------c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTGL------NATQVEKLIKEHSVYLTKDG-------R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~~~l------~~~~v~~Ll~e~~Vy~~p~g-------R  397 (420)
                      ++...++++++|+.+.+.|++.|    |..+.+   ..|++.+..+      +.+++...+++.||.+.+++       |
T Consensus       257 ~~~~~~~~~~~~~~~~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iR  332 (355)
T TIGR03301       257 VPARIARYRRNRELLVDGLRALG----FQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFR  332 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEE
Confidence            55566789999999999999887    553322   3466665433      23455444578899998862       9


Q ss_pred             EEE-cccCCCCHHHHHHHHHHHh
Q psy16707        398 ISM-AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~-agl~~~ni~~la~AI~~vv  419 (420)
                      |++ ...+.+.++.+.++|.+++
T Consensus       333 is~~~~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       333 IGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             EecCCCCCHHHHHHHHHHHHhhC
Confidence            987 4568899999999998863

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=98.08  E-value=0.00036  Score=70.85  Aligned_cols=94  Identities=17%  Similarity=0.161  Sum_probs=60.3

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCC---------CHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIG---------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G---------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .|.|..+..++++.|.+|......+  ...|.....         ..++|+.++++ +|.+     ++.|          
T Consensus         1 ~yld~aa~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~-~g~~-----~~~i----------   62 (379)
T TIGR03402         1 IYLDNNATTRVDPEVLEAMLPYFTE--YFGNPSSMHSFGGEVGKAVEEAREQVAKL-LGAE-----PDEI----------   62 (379)
T ss_pred             CcCCCcCCCCCCHHHHHHHHHHHHh--cCCCCCcccHHHHHHHHHHHHHHHHHHHH-hCCC-----CCeE----------
Confidence            3778888888999999998776542  223322111         34556666664 4532     3334          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                                  +.|.|||.++..++..+....+.+|+|++++..+|.+...+
T Consensus        63 ------------~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~  103 (379)
T TIGR03402        63 ------------IFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLC  103 (379)
T ss_pred             ------------EEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHH
Confidence                        56999999998877644322233689999998888766444

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK02948 cysteine desulfurase; Provisional

Probab=98.06  E-value=0.00022  Score=72.49  Aligned_cols=83  Identities=10%  Similarity=0.147  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC------Cce--EEecCCCHHHH-HHHHHhCCeEEeC--------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ------IGM--FCYTGLNATQV-EKLIKEHSVYLTK--------  394 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q------~Gm--F~~~~l~~~~v-~~Ll~e~~Vy~~p--------  394 (420)
                      ++++..++++++.|+.+.+.|+++|.    +....+      .+.  |..-+++.+.+ +.| +++||++..        
T Consensus       253 ~~~~~~~~~~~~~~~~l~~~L~~~~~----~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~  327 (381)
T PRK02948        253 KNMQEESLRFKELRSYFLEQIQTLPL----PIEVEGHSTSCLPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGK  327 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----CEEEeCCCccCcCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCC
Confidence            34566678999999999999998873    211111      122  22234455544 454 788999963        


Q ss_pred             -----------------CC--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        395 -----------------DG--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 -----------------~g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                                       .+  |||+... ++++++.+.++|.+++
T Consensus       328 ~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~  372 (381)
T PRK02948        328 QEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG  372 (381)
T ss_pred             CCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence                             12  8887655 6788999999998864

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=98.04  E-value=0.0003  Score=70.97  Aligned_cols=98  Identities=14%  Similarity=0.042  Sum_probs=63.8

Q ss_pred             cccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC-----------CCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        170 YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII-----------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       170 y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~-----------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      |.|..+..++++.+.++..+...+   ....|..           +..++++.+++++ |.+.    ++.|         
T Consensus         2 yl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~~----~~~v---------   64 (373)
T cd06453           2 YLDNAATSQKPQPVIDAIVDYYRH---YNANVHRGVHELSARATDAYEAAREKVARFI-NAPS----PDEI---------   64 (373)
T ss_pred             cccCccccCCCHHHHHHHHHHHHh---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHh-CCCC----CCeE---------
Confidence            778888888989998888776533   1111222           2456777887755 4321    2333         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhc-CCCCCEEEEcCCCCCCcH----HHHhhcCcc
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-FPGEKVIYVPTPTWGNHI----PICKHTGLE  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-~p~gd~VlvpdP~w~ny~----~i~~~aG~~  298 (420)
                                   +.|.|+|.++.+++..+..- .| ||+|++++|+|+.+.    .+.+..|++
T Consensus        65 -------------~~~~g~t~a~~~~~~~l~~~~~~-g~~vl~~~~~~~~~~~~~~~~~~~~g~~  115 (373)
T cd06453          65 -------------IFTRNTTEAINLVAYGLGRANKP-GDEIVTSVMEHHSNIVPWQQLAERTGAK  115 (373)
T ss_pred             -------------EEeCCHHHHHHHHHHHhhhcCCC-CCEEEECcchhHHHHHHHHHHHhhcCcE
Confidence                         56889999999888655321 16 899999999999853    233345654

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=98.03  E-value=0.00062  Score=70.19  Aligned_cols=83  Identities=19%  Similarity=0.329  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCceEEecCC-----CHHHHHHHHHhCCeEEeC------------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGL-----NATQVEKLIKEHSVYLTK------------  394 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p------------  394 (420)
                      .++.+.++++++++.+.+.|++.|    |.... ...+.|.|+.+     +.+.+..++++.||.+..            
T Consensus       280 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~  355 (416)
T PRK00011        280 EFKEYAQQVVKNAKALAEALAERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFV  355 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCC
Confidence            356677889999999999999887    43322 12346666533     345565556889999962            


Q ss_pred             -C-CcEEE-----cccCCCCHHHHHHHHHHHh
Q psy16707        395 -D-GRISM-----AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 -~-gRis~-----agl~~~ni~~la~AI~~vv  419 (420)
                       . -|++.     .+++.+++++++++|.+++
T Consensus       356 ~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~  387 (416)
T PRK00011        356 TSGIRIGTPAITTRGFKEAEMKEIAELIADVL  387 (416)
T ss_pred             CCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence             1 27743     2567899999999999874

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=98.00  E-value=0.00037  Score=69.37  Aligned_cols=96  Identities=10%  Similarity=-0.057  Sum_probs=64.6

Q ss_pred             CCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceee
Q psy16707        177 PYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQ  253 (420)
Q Consensus       177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vq  253 (420)
                      +.++..+.+......+.+ ...|.+..|..++.+++++++   +|.+.   .+..                      ++.
T Consensus         9 ~~~~~~~~~~~~~~~n~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~---~~~~----------------------~~~   62 (345)
T cd06450           9 MDPPALLLEMLTSAKNAI-DFTWDESPAATEMEAEVVNWLAKLFGLPS---EDAD----------------------GVF   62 (345)
T ss_pred             CcHHHHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHhCCCC---CCCC----------------------EEE
Confidence            344556666666665543 345999999999999998887   45320   1122                      267


Q ss_pred             cccchHHHHHHHHHHHhc-C---------C-CCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        254 GISGTGSLRVGAAFLKNF-F---------P-GEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~-~---------p-~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      |.|||.|+.+++..+... .         + .+++|++++|+++.+...++..|.+
T Consensus        63 t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~  118 (345)
T cd06450          63 TSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVK  118 (345)
T ss_pred             eCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcC
Confidence            999999999887655321 1         2 1348999999999988776666553

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=98.00  E-value=0.00054  Score=70.64  Aligned_cols=80  Identities=20%  Similarity=0.278  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE-EecCCC---HHHHHHHHHhCCeEEeCC-------C----cEEE
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF-CYTGLN---ATQVEKLIKEHSVYLTKD-------G----RISM  400 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF-~~~~l~---~~~v~~Ll~e~~Vy~~p~-------g----Ris~  400 (420)
                      ..+++++++|+.+.+.|++.|    |..++.+.+++ .+++.+   .+.+++|++++||++.+.       |    ||++
T Consensus       300 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~  375 (410)
T PRK13392        300 TERDAHQDRVAALKAKLNANG----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITP  375 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEE
Confidence            445778899999999999888    55455555555 345643   245577888899999752       2    8887


Q ss_pred             cc-cCCCCHHHHHHHHHHHh
Q psy16707        401 AG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       401 ag-l~~~ni~~la~AI~~vv  419 (420)
                      .. .+.+++++++++|.++.
T Consensus       376 ~~~~t~edid~l~~aL~~~~  395 (410)
T PRK13392        376 TPLHDDEDIDALVAALVAIW  395 (410)
T ss_pred             CCCCCHHHHHHHHHHHHHHH
Confidence            53 47788999999998763

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=97.98  E-value=0.00037  Score=69.11  Aligned_cols=81  Identities=17%  Similarity=0.042  Sum_probs=56.0

Q ss_pred             cCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccce
Q psy16707        172 DDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISI  251 (420)
Q Consensus       172 d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  251 (420)
                      .++. ..+++.|+++..+...  ....|.|..+..++++.+++++ | .      +.+                      
T Consensus         4 ~~~~-~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~~a~~~-g-~------~~~----------------------   50 (338)
T cd06502           4 SDTV-TGPTPEMLEAMAAANV--GDDVYGEDPTTAKLEARAAELF-G-K------EAA----------------------   50 (338)
T ss_pred             cccC-CCCCHHHHHHHHhccc--CCcccCCCHHHHHHHHHHHHHh-C-C------CeE----------------------
Confidence            3444 3366777777665332  2347878888899999998865 4 1      112                      


Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +.+.|||.++..++..+  +.| ||+|++++|+|+.+
T Consensus        51 ~~~~~gt~a~~~~~~~l--~~~-gd~v~~~~~~~~~~   84 (338)
T cd06502          51 LFVPSGTAANQLALAAH--TQP-GGSVICHETAHIYT   84 (338)
T ss_pred             EEecCchHHHHHHHHHh--cCC-CCeEEEecCcceee
Confidence            56889999988877644  457 89999999998753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=97.96  E-value=0.00057  Score=69.70  Aligned_cols=101  Identities=17%  Similarity=0.177  Sum_probs=63.9

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccC---CCCCCCCCCC----CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKN---LDKEYAPIIG----APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~---~~~~Y~p~~G----~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      .|.|..+-.++++.|.++......+.   ....|....|    ..++++++++++ |.+     ++.|            
T Consensus        19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~-~~~-----~~~v------------   80 (397)
T TIGR01976        19 VFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL-NAD-----PPEV------------   80 (397)
T ss_pred             EEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc-CCC-----CCeE------------
Confidence            46666666778888888876655321   1134654444    358888888865 432     1223            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcH----HHHhhcCcc
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHI----PICKHTGLE  298 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~----~i~~~aG~~  298 (420)
                                +.+.|+|.++.+....+. .+.| ||+|++++|.|+.+.    ...+..|++
T Consensus        81 ----------~~~~~~t~~l~~~~~~~~~~~~~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~  131 (397)
T TIGR01976        81 ----------VFGANATSLTFLLSRAISRRWGP-GDEVIVTRLDHEANISPWLQAAERAGAK  131 (397)
T ss_pred             ----------EEeCCHHHHHHHHHHHHHhcCCC-CCEEEEcCCchHhHHHHHHHHHHhcCCE
Confidence                      568889988876554332 2457 899999999987654    334445653

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=97.96  E-value=0.00049  Score=70.13  Aligned_cols=53  Identities=15%  Similarity=0.261  Sum_probs=39.4

Q ss_pred             CCCceEEecCC--C-HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        366 DQIGMFCYTGL--N-ATQVEKLIKEHSVYLTKDG----RISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       366 ~q~GmF~~~~l--~-~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni~~la~AI~~vv  419 (420)
                      ...|+|.|+.+  + .++++.|++ .||++.|++    ||+++ ..+++.++.+.++|.+++
T Consensus       332 ~~~g~~~~i~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l  392 (396)
T PRK02627        332 RGLGLMIGIELDRPAAEIVKKALE-KGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVL  392 (396)
T ss_pred             ccCcEEEEEEecCcHHHHHHHHHH-CCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence            35688887654  3 355677765 499999864    88765 678999999999998875

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=97.91  E-value=3.2e-05  Score=77.59  Aligned_cols=113  Identities=17%  Similarity=0.254  Sum_probs=94.8

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      +.++++...+...+  |.++..++..+|.++.+..+   +++.++++++..|..|.+.|++.    .|.....+.|+|.+
T Consensus       239 ~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~~~~~l~~~L~~~----~~~~~~~~~~~~~~  309 (363)
T PF00155_consen  239 LIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEK---WLEELRERLRENRDLLREALEEI----GITVLPPEAGFFLW  309 (363)
T ss_dssp             HHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHT----TSEEEHHSBSSEEE
T ss_pred             hhhhhhhccccccc--cchhhHHHHHhhhccccccc---ccccchhhHHHHHHHHHHHHHHh----hhheeeccCccEEE
Confidence            34566666665555  88899999999998887655   66778899999999999999877    58888889999999


Q ss_pred             cCCCH----HHHHHHHHhcceEEcC--------CCceecccCCcCCHHHHHHHH
Q psy16707         83 TGLNA----TQVEKLIKEHSVYLTK--------DGRISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus        83 ~gL~~----~qv~~L~~~~~IY~~~--------~GRinvagl~~~ni~~va~ai  124 (420)
                      ..+..    +-.++|.++++|++.+        .-||++|..+.++++.++++|
T Consensus       310 ~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  310 VRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             EEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             EEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            99886    4667898888999987        689999999999999999886

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK08637 hypothetical protein; Provisional

Probab=97.81  E-value=0.00024  Score=72.79  Aligned_cols=113  Identities=19%  Similarity=0.210  Sum_probs=87.2

Q ss_pred             hhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH---
Q psy16707         11 IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA---   87 (420)
Q Consensus        11 ~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~---   87 (420)
                      .+..++++|...-.++..+|+++    .|.++++.++.+++..+..+.+.|+..+.++.|.++..+.|||.+.-+..   
T Consensus       263 ~~~~~~~~s~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~  338 (388)
T PRK08637        263 IRSNISNGPHPSQSAVLRALNSP----EFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDA  338 (388)
T ss_pred             hhcccCCCCcHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHH
Confidence            34566788888999999999986    46667777777777778888888876655567888888999999987752   


Q ss_pred             -HHHHHHHHhcceEEc----CCCceecccCCcCCHHHHHHHHHhh
Q psy16707         88 -TQVEKLIKEHSVYLT----KDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 -~qv~~L~~~~~IY~~----~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                       +-++.|.++++|.+.    ...|||++.++..+++..++.|.++
T Consensus       339 ~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~  383 (388)
T PRK08637        339 EELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKA  383 (388)
T ss_pred             HHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHH
Confidence             234566678888876    3469999999999988887777665

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=97.79  E-value=0.0057  Score=61.50  Aligned_cols=83  Identities=20%  Similarity=0.346  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCCHHHH-HHHHHhCCeEEeCC-----CcEEEcc-cC
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLNATQV-EKLIKEHSVYLTKD-----GRISMAG-VT  404 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~~~~v-~~Ll~e~~Vy~~p~-----gRis~ag-l~  404 (420)
                      .++.++++..+.++.|.+.|++.|    +. .+.+..+++.+.--+.+.+ ++| .+.||++.+.     -|||+.. .+
T Consensus       280 g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L-~~~gi~v~~~~~~~~iRis~~~~~t  354 (371)
T PRK13520        280 GYRKVVERCMENTRWLAEELKERG----FEPVIEPVLNIVAFDDPNPDEVREKL-RERGWRVSVTRCPEALRIVCMPHVT  354 (371)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCceEEEEecCCHHHHHHHH-HHCCceeccCCCCCEEEEEEECCCC
Confidence            455677888899999999999877    44 4455566665432244555 555 5679998663     2888754 36


Q ss_pred             CCCHHHHHHHHHHHhC
Q psy16707        405 SKNVGYLAKAIHAVTK  420 (420)
Q Consensus       405 ~~ni~~la~AI~~vv~  420 (420)
                      .+.++++.+++.++++
T Consensus       355 ~edi~~~~~~l~~~~~  370 (371)
T PRK13520        355 REHIENFLEDLKEVKK  370 (371)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            7899999999998764

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=97.76  E-value=0.0011  Score=67.90  Aligned_cols=84  Identities=14%  Similarity=0.126  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--C-HHHHHHHHHhCCeEEeCCC----cEEEc
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--N-ATQVEKLIKEHSVYLTKDG----RISMA  401 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~-~~~v~~Ll~e~~Vy~~p~g----Ris~a  401 (420)
                      .+.+.++.+.++++++++.+.+.   .  ++-+.. ....|+|.++.+  + .++++.|+++ ||++.|++    ||+.+
T Consensus       295 ~~~~~~~~~~~~l~~~l~~l~~~---~--~~~~~~-v~g~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~  367 (389)
T PRK01278        295 GFLDNVQRMGLYLKQKLEGLVDR---F--PDVIEE-VRGKGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPP  367 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhh---C--CCceee-EecccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCC
Confidence            34456666666666666554322   1  111222 334678877533  2 3556777655 99999875    88864


Q ss_pred             -ccCCCCHHHHHHHHHHHh
Q psy16707        402 -GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       402 -gl~~~ni~~la~AI~~vv  419 (420)
                       ..++++|++..+++.+++
T Consensus       368 ~~~~~~~i~~~l~~l~~~l  386 (389)
T PRK01278        368 LIITEEEIDEALERLERAA  386 (389)
T ss_pred             cccCHHHHHHHHHHHHHHH
Confidence             378889999999998875

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=97.76  E-value=0.00095  Score=69.15  Aligned_cols=83  Identities=16%  Similarity=0.247  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC-------CCCceEEec--CCCHHHH-HHHHHhCCeEEeCC------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT-------DQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD------  395 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~-------~q~GmF~~~--~l~~~~v-~~Ll~e~~Vy~~p~------  395 (420)
                      -++.++++..+.++.+.+.|+++ |    +..+.       .+.|++.+.  +.+.+.+ +.|.+++||.+..+      
T Consensus       306 g~~~i~~~~~~l~~~l~~~L~~~~g----~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~  381 (424)
T PLN02855        306 GMDRIHEYEVELGTYLYEKLSSVPG----VRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQP  381 (424)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCC----EEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHH
Confidence            44566678888888999988775 3    22221       234566553  5565555 56655669988742      


Q ss_pred             ----------CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 ----------GRISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----------gRis~agl-~~~ni~~la~AI~~vv  419 (420)
                                -|||+.-. +.++|++++++|.+++
T Consensus       382 ~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~  416 (424)
T PLN02855        382 LHRYLGVNASARASLYFYNTKEEVDAFIHALKDTI  416 (424)
T ss_pred             HHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHH
Confidence                      29998544 6688999999999876

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=97.73  E-value=0.0024  Score=63.75  Aligned_cols=238  Identities=14%  Similarity=0.122  Sum_probs=144.3

Q ss_pred             HHHHHHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc--------CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        147 SNLLTEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--------NLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       147 i~~l~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--------~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      |..+.+.... -..+..|+||-|       +|...|.+.+..+.+..+        +....|..+.|...|.+++++.+-
T Consensus        16 i~~lMdDl~d~Lrt~g~imLggG-------NPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~   88 (417)
T COG3977          16 ITQLMDDLNDGLRTPGAIMLGGG-------NPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLR   88 (417)
T ss_pred             HHHHHHHHHhhccCCCceeeCCC-------CcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHH
Confidence            4444443322 234678999887       367777777766554332        123589999999999999999995


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC--CEEEEc-CCCCCCcHHHHhh
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE--KVIYVP-TPTWGNHIPICKH  294 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g--d~Vlvp-dP~w~ny~~i~~~  294 (420)
                      .+++-.+.+.+|.                      .|.|...+..-.+-++.-..+.|  +.|++| .|-|--|..+.-.
T Consensus        89 ~~ygwnit~~NIa----------------------lTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~  146 (417)
T COG3977          89 REYGWNITAQNIA----------------------LTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLE  146 (417)
T ss_pred             HHhCCCCccceee----------------------ecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccC
Confidence            5554446777774                      47777777666665554333323  345554 4666655532110


Q ss_pred             c---------------C-cc------------------------------------------------------------
Q psy16707        295 T---------------G-LE------------------------------------------------------------  298 (420)
Q Consensus       295 a---------------G-~~------------------------------------------------------------  298 (420)
                      -               | ++                                                            
T Consensus       147 ~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP  226 (417)
T COG3977         147 EDLFVSAKPNIELLPAGQFKYHVDFEHLHIGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP  226 (417)
T ss_pred             ccceeeccCCcccccccceeeccCHHHcccccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCC
Confidence            0               0 00                                                            


Q ss_pred             -------------------------------------hhhhhh------ccC-CCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 -------------------------------------KILIRA------FYS-SPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 -------------------------------------~~~~r~------~~s-~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                           ++++.+      ..| .|..+|+.|++..++.-+|.+--++-+
T Consensus       227 ~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVI  306 (417)
T COG3977         227 GIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVI  306 (417)
T ss_pred             ceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence                                                 223222      122 467889999999887666654422222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-----CCCHHHHHHHHHhCCeEEeCC--------------
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVEKLIKEHSVYLTKD--------------  395 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~--------------  395 (420)
                         +-=|+++-+.....|++.=....|---.+.+..|.|+     +.+.++.-+.+++.||.++||              
T Consensus       307 ---rPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~  383 (417)
T COG3977         307 ---RPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHT  383 (417)
T ss_pred             ---hHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCc
Confidence               2345666666666676654455676556666788874     777777755558999999997              


Q ss_pred             ---CcEEEcccCCCCH----HHHHHHHHH
Q psy16707        396 ---GRISMAGVTSKNV----GYLAKAIHA  417 (420)
Q Consensus       396 ---gRis~agl~~~ni----~~la~AI~~  417 (420)
                         -|+|++. +++.|    ..+|++|.+
T Consensus       384 hqC~Rmn~~~-~~~~ie~Gva~lae~ve~  411 (417)
T COG3977         384 HQCMRMNYVP-EPEKIEKGVAILAEEVER  411 (417)
T ss_pred             cceEEEecCC-CHHHHHHHHHHHHHHHHH
Confidence               1999984 33333    344454444

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=97.70  E-value=0.0012  Score=67.36  Aligned_cols=97  Identities=14%  Similarity=0.093  Sum_probs=67.6

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~  236 (420)
                      ..+||.+ |++ ..=|..++++.|.+|.....++     |.   +.+++++++.+++   +|.+       .+       
T Consensus         8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~~-------~~-------   63 (363)
T TIGR01437         8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGVE-------DA-------   63 (363)
T ss_pred             ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCCC-------eE-------
Confidence            3567754 555 4556677899999988876532     43   5667777777665   4432       22       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC---------------EEEEcCCCCCCc----HHHHhhcCc
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK---------------VIYVPTPTWGNH----IPICKHTGL  297 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd---------------~VlvpdP~w~ny----~~i~~~aG~  297 (420)
                                     +.|.|||.|+.+++..+  +.| ||               +|++|.|.|++|    ..+...+|+
T Consensus        64 ---------------~~~~g~t~al~~al~al--~~~-Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~  125 (363)
T TIGR01437        64 ---------------VIVSSASAGIAQSVAAV--ITR-GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGG  125 (363)
T ss_pred             ---------------EEEcCHHHHHHHHHHHH--hcC-CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCC
Confidence                           67999999999988755  446 77               999999999988    356666665


Q ss_pred             c
Q psy16707        298 E  298 (420)
Q Consensus       298 ~  298 (420)
                      +
T Consensus       126 ~  126 (363)
T TIGR01437       126 K  126 (363)
T ss_pred             e
Confidence            3

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=97.67  E-value=0.0015  Score=65.91  Aligned_cols=81  Identities=19%  Similarity=0.252  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEE---ecC---CCHHHH-HHHHHhCCeEEeCCC-------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFC---YTG---LNATQV-EKLIKEHSVYLTKDG-------  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~---~~~---l~~~~v-~~Ll~e~~Vy~~p~g-------  396 (420)
                      ++...++++++|+.+.+.|+++|    |..+.+   +.+...   +..   .+...+ +.| +++||.+.|+.       
T Consensus       262 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~~gi~v~~g~~~~~~~i  336 (363)
T TIGR02326       262 VAARHQRYQQNQKTLVAGMRALG----FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRL-KEQGFVIYPGKVSQVDCF  336 (363)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCceEEEEECCCCCCCCHHHHHHHH-HHCCEEEECCcCCCCCEE
Confidence            45566899999999999999887    443332   344433   222   233444 555 67899998872       


Q ss_pred             cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707        397 RISM-AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 Ris~-agl~~~ni~~la~AI~~vv  419 (420)
                      ||++ ...+.++++.+.++|.+++
T Consensus       337 Ri~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       337 RIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             EEecCCCCCHHHHHHHHHHHHHHh
Confidence            9985 5578999999999999876

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=97.64  E-value=0.0026  Score=65.99  Aligned_cols=98  Identities=14%  Similarity=0.004  Sum_probs=61.4

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      .+...+|+.-|.+-..=|  ...|.|.+|.....++ ..+-+.+..|.++|++++++++-+.       ++|        
T Consensus        46 dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~-~~~~~~~~~~~~~lae~l~~~~~~~-------~~v--------  107 (423)
T TIGR00713        46 DGNEYIDYVLSWGPLILG--HAHPRVVEAVKEALER-GTSYGAPTEAEILLAKEIISRVPSV-------EMV--------  107 (423)
T ss_pred             CCCEEEEccccccccccC--CCCHHHHHHHHHHHHh-CCcCCCCCHHHHHHHHHHHHhCCcc-------cEE--------
Confidence            356678888776433335  4556666666555543 3443447889999999999976331       244        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                                    +.+.|||.|+..+..+...+.. .+.|+..+|+|..+
T Consensus       108 --------------~~~~sGseA~e~Alk~ar~~~g-r~~ii~~~~~yhG~  143 (423)
T TIGR00713       108 --------------RFVNSGTEATMSAVRLARGYTG-RDKIIKFEGCYHGH  143 (423)
T ss_pred             --------------EEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCCCCC
Confidence                          4589999888887765433323 46666655555554

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=97.63  E-value=0.0037  Score=63.90  Aligned_cols=83  Identities=16%  Similarity=0.220  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC------------HH-HHHHHHHhCCeEEeCCC----cE
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------------AT-QVEKLIKEHSVYLTKDG----RI  398 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------------~~-~v~~Ll~e~~Vy~~p~g----Ri  398 (420)
                      .+.++++++++.+.+.|++++...++.......|+|.++.+.            .. ..+.| .++||++.|++    ||
T Consensus       313 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~~~~lR~  391 (413)
T cd00610         313 GLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSGGNVIRL  391 (413)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecCCCEEEE
Confidence            455777777888888777664311121112345666654321            22 33555 57899999862    88


Q ss_pred             EEccc-CCCCHHHHHHHHHHHh
Q psy16707        399 SMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~agl-~~~ni~~la~AI~~vv  419 (420)
                      +++.. ++++|+.+.+++.+++
T Consensus       392 ~~~~~~t~~~i~~~~~~l~~~l  413 (413)
T cd00610         392 LPPLIITEEEIDEGLDALDEAL  413 (413)
T ss_pred             ECCCcCCHHHHHHHHHHHHHhC
Confidence            87754 6789999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=97.56  E-value=0.0051  Score=63.06  Aligned_cols=80  Identities=14%  Similarity=0.167  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---H-HHHHHHHHhCCeEEeCCC----cEEEcc-cCCCC
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---A-TQVEKLIKEHSVYLTKDG----RISMAG-VTSKN  407 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~-~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~~~n  407 (420)
                      ..+++.++++.|.+.|++++.+  +-......|.|.++-++   . +..+.| .+.||++.+.+    ||+.+. .+++.
T Consensus       304 ~~~~~~~~~~~l~~~L~~~~~~--~~~~v~g~g~~~~i~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~iR~~p~~~~t~~~  380 (398)
T PRK03244        304 LLENAERLGEQLRAGIEALGHP--LVDHVRGRGLLLGIVLTAPVAKAVEAAA-REAGFLVNAVAPDVIRLAPPLIITDAQ  380 (398)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCC--ceeeEeeccEEEEEEEeccHHHHHHHHH-HHCCeEEeecCCCEEEEECCCcCCHHH
Confidence            3467777788888899887632  11122347888886553   2 334555 57899998754    888776 78899


Q ss_pred             HHHHHHHHHHHh
Q psy16707        408 VGYLAKAIHAVT  419 (420)
Q Consensus       408 i~~la~AI~~vv  419 (420)
                      |+++.+++.+++
T Consensus       381 i~~~~~~l~~~l  392 (398)
T PRK03244        381 VDAFVAALPAIL  392 (398)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998876

>PLN02409 serine--glyoxylate aminotransaminase

Probab=97.55  E-value=0.0084  Score=61.99  Aligned_cols=83  Identities=14%  Similarity=0.159  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----CceEEec----CCCHH-HHHHHHHhCCeEEeCC-----C--
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD-----G--  396 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~-----g--  396 (420)
                      -++.+.+|+++.++.+.+.|++.|    ++.+.+.    .+...++    +.+.+ .++.|+++++|.+..|     |  
T Consensus       270 G~e~i~~~~~~l~~~l~~~L~~~g----~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~  345 (401)
T PLN02409        270 GLENVIARHARLGEATRLAVEAWG----LKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKV  345 (401)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCE
Confidence            367778999999999999999887    3433321    2221222    45544 4478889999999865     2  


Q ss_pred             -cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        397 -RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                       ||+..|- +..++..+..|+.+++
T Consensus       346 ~Rig~~g~~~~~~~~~~~~~~~~~l  370 (401)
T PLN02409        346 FRIGHLGNVNELQLLGALAGVEMVL  370 (401)
T ss_pred             EEEcCCCCCCHHHHHHHHHHHHHHH
Confidence             9998874 5566777777777764

>PRK07179 hypothetical protein; Provisional

Probab=97.53  E-value=0.0048  Score=63.55  Aligned_cols=80  Identities=15%  Similarity=0.251  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CC--CHHHHHHHHHhCCeEE----eCC-------CcE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL--NATQVEKLIKEHSVYL----TKD-------GRI  398 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l--~~~~v~~Ll~e~~Vy~----~p~-------gRi  398 (420)
                      .+..+++++++++.|.+.|+++|    |+.. .. |.|.++  +.  +.+.+...+.++||++    .|.       -||
T Consensus       301 ~~~~~~~l~~~~~~l~~~L~~~g----~~v~-~~-~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRi  374 (407)
T PRK07179        301 ADDRRARLHANARFLREGLSELG----YNIR-SE-SQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRL  374 (407)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcC----CCCC-CC-CCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEE
Confidence            34567889999999999999887    4322 33 444443  32  2345544557889973    332       299


Q ss_pred             EEcc-cCCCCHHHHHHHHHHHh
Q psy16707        399 SMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +++. .+.+.|+++.+++.+++
T Consensus       375 s~~~~~t~edi~~~~~~l~~~~  396 (407)
T PRK07179        375 SLNADLTASDLDRVLEVCREAR  396 (407)
T ss_pred             EECCCCCHHHHHHHHHHHHHHH
Confidence            9975 47789999999998864

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=97.53  E-value=0.0088  Score=60.40  Aligned_cols=81  Identities=19%  Similarity=0.242  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---C-ceEE-ecC----CCHHHH-HHHHHhCCeEEeCC-------C
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---I-GMFC-YTG----LNATQV-EKLIKEHSVYLTKD-------G  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~-GmF~-~~~----l~~~~v-~~Ll~e~~Vy~~p~-------g  396 (420)
                      ++...+++.++|+.+.+.|+++|    |..+.++   . +... +..    .+.+.+ ++| .+.||.+.++       -
T Consensus       263 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gi~v~~g~~~~~~~i  337 (368)
T PRK13479        263 VPARGARYANNQRTLVAGMRALG----FEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERL-KEQGFVIYPGKLTQVDTF  337 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CcccCCchhcCceEEEEECCCCCCcCHHHHHHHH-HHCCEEEecCCCCCCCEE
Confidence            45556889999999999999987    4433221   1 2222 322    233444 555 6779999774       2


Q ss_pred             cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707        397 RISM-AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 Ris~-agl~~~ni~~la~AI~~vv  419 (420)
                      ||+. ...+.++++++.+++.+++
T Consensus       338 Ris~~~~~t~edi~~~l~~L~~~l  361 (368)
T PRK13479        338 RIGCIGDVDAADIRRLVAAIAEAL  361 (368)
T ss_pred             EEecCCCCCHHHHHHHHHHHHHHH
Confidence            9985 6678899999999998875

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=97.52  E-value=0.0068  Score=61.81  Aligned_cols=84  Identities=13%  Similarity=0.215  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc--cCCCCceEEecCCC------------HHHHHHHHHhCCeE-EeCC
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH--ITDQIGMFCYTGLN------------ATQVEKLIKEHSVY-LTKD  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~--i~~q~GmF~~~~l~------------~~~v~~Ll~e~~Vy-~~p~  395 (420)
                      .+.++.+.+.++.+| .|.+.|+++|    ++.  ..+....|.++..+            ..++...+.+.||+ +.++
T Consensus       264 ~~~l~~~~~~~~~~~-~l~~~L~~~g----~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~  338 (370)
T TIGR02539       264 VERVKRWDEEVKKTR-WFVAELEDIG----FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG  338 (370)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHhCC----cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCC
Confidence            344554545555544 7999999988    442  22345556654321            12454444677998 6664


Q ss_pred             C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 G----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 g----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      .    ||++++.+.++++++.+++.+++
T Consensus       339 ~~~~iRis~~~~t~e~i~~l~~~L~~~~  366 (370)
T TIGR02539       339 QTKYFKLSVYGLTKEQVEYVVDSFEEIV  366 (370)
T ss_pred             cceEEEEEecCCCHHHHHHHHHHHHHHH
Confidence            2    99987789999999999998875

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>cd00609 AAT_like Aspartate aminotransferase family

Probab=97.51  E-value=0.00075  Score=66.27  Aligned_cols=113  Identities=19%  Similarity=0.228  Sum_probs=90.6

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      .+.++...+..+++||.++...+...|....      ++++.++++++..++.|.+.|++.+....   .....|+|.++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---~~~~~g~~~~~  294 (350)
T cd00609         224 LERLKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALKELGPLVV---VKPSGGFFLWL  294 (350)
T ss_pred             HHHHHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHHhcCCccc---cCCCccEEEEE
Confidence            4566777787889999999999999998755      66788889999999999999987654321   35577898888


Q ss_pred             CCC----HHHHHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHh
Q psy16707         84 GLN----ATQVEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        84 gL~----~~qv~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~  126 (420)
                      .++    .+.+.++-++++|++...          -||+++.. .++|++++++|.+
T Consensus       295 ~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~~  350 (350)
T cd00609         295 DLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE  350 (350)
T ss_pred             ecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhhC
Confidence            665    456777778999999865          58999999 9999999999863

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=97.48  E-value=0.019  Score=57.80  Aligned_cols=80  Identities=14%  Similarity=0.244  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccCCCCceEEecCCC-HHHHHHHHHhCCeEEeCC-----CcEEEccc-C
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD-----GRISMAGV-T  404 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~-~i~~q~GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-----gRis~agl-~  404 (420)
                      .++.+.+++.+.++.|.+.|+++|    +. .+.+...+..+...+ .+..++| .+.||++.+.     -||++.+. +
T Consensus       285 g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L-~~~gi~v~~~~~~~~iRis~~~~~t  359 (373)
T TIGR03812       285 GYRKIVAECMENTRYLVEELKKIG----FEPVIEPVLNIVAFEVDDPEEVRKKL-RDRGWYVSVTRCPKALRIVVMPHVT  359 (373)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC----CeEEcCCCceEEEEEeCCHHHHHHHH-HHCCceeccCCCCCEEEEEEECCCC
Confidence            445677899999999999999987    33 223333333332112 3444666 5679999764     29988654 7


Q ss_pred             CCCHHHHHHHHHH
Q psy16707        405 SKNVGYLAKAIHA  417 (420)
Q Consensus       405 ~~ni~~la~AI~~  417 (420)
                      .+.++++.++|.+
T Consensus       360 ~edid~l~~~L~~  372 (373)
T TIGR03812       360 REHIEEFLEDLKE  372 (373)
T ss_pred             HHHHHHHHHHHhh
Confidence            7889999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=97.47  E-value=0.011  Score=59.93  Aligned_cols=79  Identities=14%  Similarity=0.143  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCCC----cEEE-cccCCCCHH
Q psy16707        339 DRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----RISM-AGVTSKNVG  409 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~g----Ris~-agl~~~ni~  409 (420)
                      ++++++++.+.+.|++.  +.+  +.......|+|.|+.+.  .+.+...+.+.||++.|+|    ||+. ...++++|+
T Consensus       290 ~~~~~~~~~l~~~L~~~~~~~~--~~~~v~~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~  367 (377)
T PRK02936        290 EEVQEKGEYFLQKLQEELEHLE--CVKNIRGKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELD  367 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCC--cEEeEeecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHH
Confidence            55566666666666653  222  11112356888887653  3444445578999999875    8886 458999999


Q ss_pred             HHHHHHHHHh
Q psy16707        410 YLAKAIHAVT  419 (420)
Q Consensus       410 ~la~AI~~vv  419 (420)
                      ++.++|.+++
T Consensus       368 ~~i~~l~~~~  377 (377)
T PRK02936        368 QAVYLLKKVL  377 (377)
T ss_pred             HHHHHHHHhC
Confidence            9999998764

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=97.45  E-value=0.0062  Score=62.80  Aligned_cols=74  Identities=24%  Similarity=0.386  Sum_probs=45.0

Q ss_pred             CCCCC-CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc--
Q psy16707        195 LDKEY-APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--  271 (420)
Q Consensus       195 ~~~~Y-~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--  271 (420)
                      +...| .-..|+|+.|+..++++ |.+     +++|                        ..||..+|.+....+...  
T Consensus        60 D~RNY~G~l~Gipe~r~l~a~ll-gv~-----~~~v------------------------iv~gNSSL~lM~d~i~~a~~  109 (425)
T PF12897_consen   60 DCRNYPGGLDGIPEARELFAELL-GVP-----PENV------------------------IVGGNSSLNLMHDTISRAML  109 (425)
T ss_dssp             BTTSS-S-SS--HHHHHHHHHHH-TS------GGGE------------------------EE-SS-HHHHHHHHHHHHHH
T ss_pred             cccCCCCccCChHHHHHHHHHHh-CCC-----HHHE------------------------EEeccchHHHHHHHHHHHHh
Confidence            34689 88999999999999976 543     3444                        347777777655443321  


Q ss_pred             -------CCC----CCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        272 -------FPG----EKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       272 -------~p~----gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                             .|.    .-+.+.|-|+|.-|+.|++..|++
T Consensus       110 ~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gie  147 (425)
T PF12897_consen  110 HGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIE  147 (425)
T ss_dssp             H--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-E
T ss_pred             cCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcE
Confidence                   121    234788999999999999999997

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=97.44  E-value=0.013  Score=60.36  Aligned_cols=95  Identities=17%  Similarity=0.096  Sum_probs=61.2

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccC-CCCC-CC------CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKN-LDKE-YA------PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-~~~~-Y~------p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      .|.|..+-.++++.|.++........ .+.. ..      ....+.++|+.+++++ |.+     ++.|           
T Consensus         5 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-----~~~v-----------   67 (402)
T TIGR02006         5 IYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI-GAD-----SREI-----------   67 (402)
T ss_pred             EEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE-----------
Confidence            57788787788899999876654321 1111 01      1123556677787754 532     3334           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHH
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                                 +.|.|||.++.+++..+..  ..+ ||.|+++++.++++...+
T Consensus        68 -----------~~~~g~t~a~~~~l~~l~~~~~~~-g~~Vi~~~~~h~s~~~~~  109 (402)
T TIGR02006        68 -----------VFTSGATESNNLAIKGIAHFYKSK-GNHIITSKTEHKAVLDTC  109 (402)
T ss_pred             -----------EEeCCHHHHHHHHHHHHHHhhcCC-CCEEEECCCccHHHHHHH
Confidence                       5689999999887654432  235 899999999998766444

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=97.30  E-value=0.022  Score=60.67  Aligned_cols=107  Identities=11%  Similarity=0.044  Sum_probs=62.0

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCC---CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEY---APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y---~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      ++--+|.|.+     ...++|.|.++..........|.|   .+..|..+++.++++++-...+.  +  .+.       
T Consensus        69 ~~~~~g~G~~-----~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~--~~~-------  132 (481)
T PRK04366         69 DTGFYPLGSC-----TMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--D--AVT-------  132 (481)
T ss_pred             CcceecCccc-----CCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--C--ceE-------
Confidence            3345777752     245666666655443111345677   44679999999888887332221  1  122       


Q ss_pred             CCccccccccccceeecccc-hHHHHHHHHHH-HhcCCCCC----EEEEcCCCCCCcHHHHhhcCcc
Q psy16707        238 TGSLRVGAAFQISIVQGISG-TGSLRVGAAFL-KNFFPGEK----VIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gG-tgal~~~~~~l-~~~~p~gd----~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                    +...+| ++.+...+.+- ....+ ||    +|++++|+||.|...++..|++
T Consensus       133 --------------l~~~~GA~a~~~~l~~~r~~~~~~-Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~  184 (481)
T PRK04366        133 --------------LQPAAGAHGELTGLLMIRAYHEAR-GDTKRTEVIVPDSAHGTNPASAAMAGFK  184 (481)
T ss_pred             --------------EEeCcHHHHHHHHHHHHHHHhhcc-CcCCCCEEEEcCCccHhHHHHHHHcCCE
Confidence                          333333 34433222110 11335 65    9999999999999998888875

>PRK06108 aspartate aminotransferase; Provisional

Probab=97.29  E-value=0.002  Score=65.19  Aligned_cols=111  Identities=16%  Similarity=0.147  Sum_probs=77.6

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++.+.....+++|..+..++...|.+.      .+.++.++++++..|+.|.+.|++.  + .|..+..+.|||.+..+
T Consensus       253 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~p~~g~~~~~~l  323 (382)
T PRK06108        253 VLEKLIEYNTSCVAQFVQRAAVAALDEG------EDFVAELVARLRRSRDHLVDALRAL--P-GVEVAKPDGAMYAFFRI  323 (382)
T ss_pred             HHHHHHHhcccCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHHhC--C-CCcccCCCeeEEEEEeC
Confidence            3444444456678888888888888763      2345678889999999999999875  2 27777778899988766


Q ss_pred             C-----HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHh
Q psy16707         86 N-----ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        86 ~-----~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~  126 (420)
                      .     .+.++.|.++++|++.+.        +  ||+++. ++..++...+.|.+
T Consensus       324 ~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  378 (382)
T PRK06108        324 PGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRR  378 (382)
T ss_pred             CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence            3     356677888899999542        2  677776 55555555555544

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=97.26  E-value=0.012  Score=60.80  Aligned_cols=61  Identities=11%  Similarity=0.030  Sum_probs=41.5

Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEE
Q psy16707        199 YAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVI  278 (420)
Q Consensus       199 Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~V  278 (420)
                      |....+..+|.+++++++-+++.                              +..++|+.+...+...+  +.| ||.|
T Consensus        39 yg~~~~~~~LE~~lA~~~g~e~a------------------------------l~~~sG~~a~~~~i~~l--~~~-GD~V   85 (392)
T PLN03227         39 YGTIDAHLELEQCMAEFLGTESA------------------------------ILYSDGASTTSSTVAAF--AKR-GDLL   85 (392)
T ss_pred             cCChHHHHHHHHHHHHHhCCCcE------------------------------EEecCcHHHHHHHHHHh--CCC-CCEE
Confidence            77777899999999997744321                              44566654444443323  457 8999


Q ss_pred             EEcCCCCCCcHHHH
Q psy16707        279 YVPTPTWGNHIPIC  292 (420)
Q Consensus       279 lvpdP~w~ny~~i~  292 (420)
                      +++++.|+++...+
T Consensus        86 l~~~~~h~s~~~~~   99 (392)
T PLN03227         86 VVDRGVNEALLVGV   99 (392)
T ss_pred             EEeccccHHHHHHH
Confidence            99999998877553

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=97.26  E-value=0.015  Score=59.75  Aligned_cols=76  Identities=24%  Similarity=0.375  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHhc-CCCCCCcccC---CCCceEEe-cC-C---------C-HHHHHHHHHhCCeEEeCCC-----c
Q psy16707        339 DRIISMRQSLKDNLQKE-GSNKPWNHIT---DQIGMFCY-TG-L---------N-ATQVEKLIKEHSVYLTKDG-----R  397 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i~---~q~GmF~~-~~-l---------~-~~~v~~Ll~e~~Vy~~p~g-----R  397 (420)
                      ++..++++.+.+.|+++ |    ++.+.   ....+..+ ++ +         + .++.+.| +++||+..+.|     |
T Consensus       283 ~~~~~~~~~l~~~L~~l~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~~~~i~r  357 (387)
T PRK09331        283 DEEVKKARWFVDELEKIEG----FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPGATKEFK  357 (387)
T ss_pred             HHHHHHHHHHHHHHhcCCC----EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccCCceEEE
Confidence            34455666888899888 6    33231   12222221 11 1         1 2344666 67899965433     7


Q ss_pred             EEEcccCCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl~~~ni~~la~AI~~vv  419 (420)
                      |...|.+.++++++.+++.++.
T Consensus       358 i~~~g~t~~di~~l~~aL~~i~  379 (387)
T PRK09331        358 LSTYGLTWEQVEYVADAFKEIA  379 (387)
T ss_pred             EEeccCCHHHHHHHHHHHHHHH
Confidence            8877889999999999999874

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=97.20  E-value=0.03  Score=57.53  Aligned_cols=81  Identities=21%  Similarity=0.225  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-cCCC---HHHHHHHHHhCCeEEeCC-------C----cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLN---ATQVEKLIKEHSVYLTKD-------G----RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~~l~---~~~v~~Ll~e~~Vy~~p~-------g----Ris  399 (420)
                      ..+++++.++++.+.+.|+++|    |+.+....+++.. ++..   .+..++|++++||++.+.       |    ||+
T Consensus       298 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis  373 (402)
T TIGR01821       298 QDLRRAHQENVKRLKNLLEALG----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRIT  373 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEE
Confidence            3445677788899999999887    5555555444332 3321   245577777889998651       2    788


Q ss_pred             Ecc-cCCCCHHHHHHHHHHHh
Q psy16707        400 MAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       400 ~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +.. .+.++|+++.+++++++
T Consensus       374 ~~~~~t~edi~~~~~~l~~~~  394 (402)
T TIGR01821       374 PTPAHTDKMIDDLVEALLLVW  394 (402)
T ss_pred             eCCCCCHHHHHHHHHHHHHHH
Confidence            754 47788999999998875

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=97.16  E-value=0.029  Score=58.15  Aligned_cols=89  Identities=16%  Similarity=0.222  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC-----------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSN----KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD-----------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~----~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~-----------  395 (420)
                      .+++.....++.+.|+.|.+.|.+....    +.=++-.+..=-|++-|+..|.+...++.+||++..|           
T Consensus       255 ~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pS  334 (386)
T COG1104         255 VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPS  334 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCcc
Confidence            3566666788999999999999875211    0112234445567778888888877779999999764           


Q ss_pred             ----------------CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 ----------------GRISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----------------gRis~agl-~~~ni~~la~AI~~vv  419 (420)
                                      -|||+... +++.++++++++.+++
T Consensus       335 hVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i  375 (386)
T COG1104         335 HVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEII  375 (386)
T ss_pred             HHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence                            19999977 4567999999999876

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=97.13  E-value=0.048  Score=55.54  Aligned_cols=101  Identities=10%  Similarity=0.092  Sum_probs=67.1

Q ss_pred             hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CHHHHHHHHHhC
Q psy16707        311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEH  388 (420)
Q Consensus       311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~~~v~~Ll~e~  388 (420)
                      ..++.++..+|..  +  +..+.++.++++.+..|+.+.+.+.+.+.   +..+. ..|+|.|+.+  +.+++...+.++
T Consensus       268 ~~~~~aa~a~l~~--~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~  339 (375)
T PRK04260        268 KLSMAAASATLDI--M--LTAGFLEQALENGNYLQEQLQKALQDKET---VTTVR-GLGYMIGIETTADLSQLVEAARDK  339 (375)
T ss_pred             HHHHHHHHHHHHH--H--HhhHHHHHHHHHHHHHHHHHHHHHhhCCC---eeEEe-ccceEEEEEecCcHHHHHHHHHhC
Confidence            3355555555532  1  12245566778888888888887766531   22333 3799998754  344443344679


Q ss_pred             CeEEeCCC----cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707        389 SVYLTKDG----RISM-AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       389 ~Vy~~p~g----Ris~-agl~~~ni~~la~AI~~vv  419 (420)
                      ||++.|.+    ||+. +.++++.|+++.++|.+++
T Consensus       340 Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~  375 (375)
T PRK04260        340 GLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF  375 (375)
T ss_pred             CCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence            99998865    9998 7889999999999988763

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=97.13  E-value=0.05  Score=56.86  Aligned_cols=83  Identities=17%  Similarity=0.258  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC----CCCceEEe--cCCCHHHHHHHHHhCCeEEeCC------------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCY--TGLNATQVEKLIKEHSVYLTKD------------  395 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~----~q~GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~------------  395 (420)
                      ++.+.++.++..+.+.+.|+++..   +..+.    .+.|+++|  -|..+..+...+.+.+|.+-.|            
T Consensus       298 ~~~i~~~e~~L~~~~~~~L~~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~  374 (405)
T COG0520         298 MEAIEAHERELTEYLLEGLSELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLG  374 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcC
Confidence            456667777888888888887642   34332    35788887  3777888777778888998765            


Q ss_pred             ----CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 ----GRISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----gRis~agl-~~~ni~~la~AI~~vv  419 (420)
                          -|+|++-. +.++|++|+++|+++.
T Consensus       375 ~~~~iR~S~~~YNt~edid~l~~aL~~~~  403 (405)
T COG0520         375 VDATIRASLHLYNTEEDVDRLLEALKKAL  403 (405)
T ss_pred             CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence                49999866 5678999999999874

>PRK09064 5-aminolevulinate synthase; Validated

Probab=97.08  E-value=0.044  Score=56.33  Aligned_cols=81  Identities=20%  Similarity=0.242  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-cCC--C-HHHHHHHHHhCCeEEeC--------C---CcEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGL--N-ATQVEKLIKEHSVYLTK--------D---GRIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~~l--~-~~~v~~Ll~e~~Vy~~p--------~---gRis  399 (420)
                      ...++++.++++.+.+.|++.|    |+.+....+++.. ++.  + .+..++|++++||++.+        +   -||+
T Consensus       299 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis  374 (407)
T PRK09064        299 NEERERHQERAAKLKAALDAAG----IPVMPNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRIT  374 (407)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEE
Confidence            3446788999999999999987    5555544443322 332  1 24457787788999964        2   2888


Q ss_pred             Ecc-cCCCCHHHHHHHHHHHh
Q psy16707        400 MAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       400 ~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +.. .+.++++++.++|++++
T Consensus       375 ~~~~~t~edi~~l~~~l~~~~  395 (407)
T PRK09064        375 PTPFHTDEMIDHLVEALVEVW  395 (407)
T ss_pred             eCCCCCHHHHHHHHHHHHHHH
Confidence            753 37889999999998874

>PRK14012 cysteine desulfurase; Provisional

Probab=97.08  E-value=0.044  Score=56.41  Aligned_cols=97  Identities=18%  Similarity=0.035  Sum_probs=63.7

Q ss_pred             cccccCCCCCCchHHHHHHHHHHHc--c-CCC-CCCCC------CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        168 GAYRDDQGKPYVLPSVKQADEIVLN--K-NLD-KEYAP------IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       168 G~y~d~dg~~~~~~~V~~a~~~~~~--~-~~~-~~Y~p------~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      ..|.|..+..+.++.|.++......  . ..+ +...+      .....++++.+++++ |.+     ++.|        
T Consensus         4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~-g~~-----~~~v--------   69 (404)
T PRK14012          4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI-GAD-----PREI--------   69 (404)
T ss_pred             eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc-CcC-----cCeE--------
Confidence            3688888888899999998866543  1 111 11111      123567788888754 533     2333        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHHh
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPICK  293 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~~  293 (420)
                                    +.+.|||.++.+++..+..  ..+ ||.|++++++++.....++
T Consensus        70 --------------~~~~g~t~al~~~l~~l~~~~~~~-gd~Vi~~~~~~~s~~~~~~  112 (404)
T PRK14012         70 --------------VFTSGATESDNLAIKGAAHFYQKK-GKHIITSKTEHKAVLDTCR  112 (404)
T ss_pred             --------------EEeCCHHHHHHHHHHHHHHhhcCC-CCEEEEecCccHHHHHHHH
Confidence                          5689999999887754432  245 8999999999988765554

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=97.07  E-value=0.071  Score=54.97  Aligned_cols=78  Identities=18%  Similarity=0.275  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-cCCC---HHHHHHHHHhCCeEEeC--------C-C--cEEEcc
Q psy16707        338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLN---ATQVEKLIKEHSVYLTK--------D-G--RISMAG  402 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~~l~---~~~v~~Ll~e~~Vy~~p--------~-g--Ris~ag  402 (420)
                      +.+++++++.|.+.|++.|    |..+..+..++.. .+.+   .+..++|++++||++.+        + +  ||++..
T Consensus       301 ~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~  376 (406)
T PRK13393        301 RERHQDRVARLRARLDKAG----IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSP  376 (406)
T ss_pred             HHHHHHHHHHHHHHHHHcC----CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECC
Confidence            4677888899999998877    5545444444433 2321   23446777778999854        2 2  887753


Q ss_pred             -cCCCCHHHHHHHHHHHh
Q psy16707        403 -VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 -l~~~ni~~la~AI~~vv  419 (420)
                       .+.++++.+++++.+++
T Consensus       377 ~~t~edid~l~~~l~~~~  394 (406)
T PRK13393        377 LHTDADIEHLVQALSEIW  394 (406)
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence             37788999999998864

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=96.92  E-value=0.052  Score=56.32  Aligned_cols=106  Identities=21%  Similarity=0.247  Sum_probs=71.0

Q ss_pred             hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--------cC
Q psy16707        304 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--------TG  375 (420)
Q Consensus       304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--------~~  375 (420)
                      ..-.+||.+.-......|     +.--.+-++...+|.+++.+.+.+.++++|+    +.+. ..+..++        -|
T Consensus       238 ~~p~Tppv~~i~aL~~al-----~~i~~EGle~r~~RH~~~~~a~r~~~~alGl----~~~~-~~~~~s~tvta~~~P~g  307 (383)
T COG0075         238 STPYTPPVNLIYALREAL-----DLILEEGLEARIARHRRLAEALRAGLEALGL----ELFA-DPERRSPTVTAIKVPEG  307 (383)
T ss_pred             CCCCCCCHHHHHHHHHHH-----HHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC----cccc-CcccCCCceEEEECCCC
Confidence            444566776666554433     2222233666678899999999999999994    4344 4444442        24


Q ss_pred             CCHHHH-HHHHHhCCeEEeCC-----C---cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        376 LNATQV-EKLIKEHSVYLTKD-----G---RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       376 l~~~~v-~~Ll~e~~Vy~~p~-----g---Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                      .+.+++ ..++++++|.+.+|     |   ||+--| ++..++.+...+|..++
T Consensus       308 ~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L  361 (383)
T COG0075         308 VDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAAL  361 (383)
T ss_pred             CCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence            454454 46889999999886     2   998777 46777888888887765

>PRK07550 hypothetical protein; Provisional

Probab=96.90  E-value=0.0089  Score=61.00  Aligned_cols=113  Identities=18%  Similarity=0.258  Sum_probs=79.8

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-   83 (420)
                      .++..+......++|..+..++..+|++   ..+|.   +.++++++..|..+.+.|.+.   ..|.. ..+.|+|.+. 
T Consensus       256 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~---~~~~~~~~~~~~~l~~~L~~~---~~~~~-~~~g~~~~~~~  325 (386)
T PRK07550        256 AEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWR---AGNRAEIARRRDAFRAVFARL---PGWEL-LASGAYFAYVR  325 (386)
T ss_pred             HHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHH---HHHHHHHHHHHHHHHHHHHhC---CCcee-CCCceEEEEec
Confidence            3455566666778899999999999975   23454   446678888899999999875   23543 3567888886 


Q ss_pred             ----CCCHHH-HHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707         84 ----GLNATQ-VEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 ----gL~~~q-v~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v  127 (420)
                          +.+.++ +++|.++++|++.+.          =||++++.+.++++...+.|.+.
T Consensus       326 ~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        326 HPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF  384 (386)
T ss_pred             CCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence                444444 566778899999652          27888888777777777766543

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=96.85  E-value=0.008  Score=61.76  Aligned_cols=82  Identities=16%  Similarity=0.121  Sum_probs=60.3

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------   86 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--------   86 (420)
                      +.+++.....++..+|.+.  ..   +.++.++++++..|+.+.+.|++.  ++ |.++..+.|||.+..++        
T Consensus       275 ~~~~~~~~q~a~~~~l~~~--~~---~~l~~~~~~~~~~r~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~~~~~~~~  346 (401)
T TIGR01264       275 ILGPCTIVQGALPSILLRT--PQ---EYFDGTLSVLESNAMLCYGALAAV--PG-LRPVMPSGAMYMMVGIEMEHFPEFK  346 (401)
T ss_pred             cCCCCcHHHHHHHHHHHhC--cH---HHHHHHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeeEEEEEecccccCCCC
Confidence            3445555666678888651  23   446667788888999999999875  34 77788899999999863        


Q ss_pred             --HHHHHHHHHhcceEEcCC
Q psy16707         87 --ATQVEKLIKEHSVYLTKD  104 (420)
Q Consensus        87 --~~qv~~L~~~~~IY~~~~  104 (420)
                        .+.++.|.++++|++.+.
T Consensus       347 ~~~~~~~~l~~~~gI~v~pg  366 (401)
T TIGR01264       347 NDVEFTERLVAEQSVFCLPG  366 (401)
T ss_pred             CHHHHHHHHHHhCCEEEeCc
Confidence              345678888899998754

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=96.85  E-value=0.01  Score=62.57  Aligned_cols=107  Identities=14%  Similarity=0.390  Sum_probs=76.9

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHH----
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNAT----   88 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~----   88 (420)
                      ..|+++|.....+++.+|+|+++..+|   ++++++|++..|+.+.+.|++.+.    .++.-+-|||.+..|++-    
T Consensus       306 ~~~~~~s~~~q~~~~~~L~d~~~~~~~---l~~~r~~l~~~~~~~~~~L~~~gi----~~~~~~ag~fvw~~L~~~~~~~  378 (447)
T PLN02607        306 SSFTLVSSQTQHLLASMLSDEEFTENY---IRTNRERLRKRYEMIVQGLRRAGI----ECLKGNAGLFCWMNLSPLLETP  378 (447)
T ss_pred             hhcCCCCHHHHHHHHHHhCCchhHHHH---HHHHHHHHHHHHHHHHHHHHhCCC----CcccCCeeEEEEEEchHhhcCC
Confidence            345567777889999999998876666   456789999999999999998653    456678899999988631    


Q ss_pred             ------H-HHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHh
Q psy16707         89 ------Q-VEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        89 ------q-v~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~  126 (420)
                            + .++|.++++|++.+..          ||+++.++...++.-.+.|.+
T Consensus       379 ~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~  433 (447)
T PLN02607        379 TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHR  433 (447)
T ss_pred             CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Confidence                  2 3467788999987632          466666555555544444433

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=96.79  E-value=0.011  Score=61.48  Aligned_cols=103  Identities=17%  Similarity=0.174  Sum_probs=80.4

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEK   92 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~   92 (420)
                      .++|.....++...|++++    |.+-++.+++.++..|..+.+.|++.+    |.+...+.|||.+..++   .+-++.
T Consensus       312 ~~~s~~~q~a~~~~l~~~~----~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~~p~gg~f~~~~l~~~~~~~~~~  383 (431)
T PRK15481        312 QWVSHLLQDLVYACLTDPE----YQARLAQARLFYAQRRQKLARALQQYG----IAIPSPGDGLNLWLPLDTDSQATALT  383 (431)
T ss_pred             cCCCHHHHHHHHHHHhCcc----HHHHHHHHHHHHHHHHHHHHHHHHHcC----CccccCCCeEEEEEECCCCHHHHHHH
Confidence            3467778899999998854    455577889999999999999998763    55556789999999885   345555


Q ss_pred             HHHhcceEEcC----------C-CceecccCCcCCHHHHHHHHHhh
Q psy16707         93 LIKEHSVYLTK----------D-GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        93 L~~~~~IY~~~----------~-GRinvagl~~~ni~~va~ai~~v  127 (420)
                      |. +++|.+.+          + =|||++.+++.+++..++.|+++
T Consensus       384 l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~  428 (431)
T PRK15481        384 LA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQA  428 (431)
T ss_pred             HH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHH
Confidence            64 67876654          1 29999999999999999998876

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=96.75  E-value=0.061  Score=56.22  Aligned_cols=99  Identities=15%  Similarity=-0.008  Sum_probs=61.9

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      .+...+|+.-|.+-..=|  ...|.|.+|..+..++ ..+.|.+..+..+|.+.+++++-+       .+++        
T Consensus        48 dG~~~lD~~~g~~~~~lG--h~~p~i~~a~~~~~~~-~~~~~~~~~~~~~la~~L~~~~~~-------~~~v--------  109 (426)
T PRK00062         48 DGNEYIDYVGSWGPMILG--HAHPEVVEAVIEAAEK-GLSFGAPTELEVELAELVIELVPS-------IEMV--------  109 (426)
T ss_pred             CCCEEEEcccchhhhhcC--CCCHHHHHHHHHHHHh-CCcCCCCCHHHHHHHHHHHHhCCC-------CCEE--------
Confidence            356789998885433435  2445555555544443 345567777888888888876522       1244        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                                    ..+.||+.|...+..+...+.. .+.|+..+++|..+.
T Consensus       110 --------------~~~~sGseA~e~Aik~a~~~~g-~~~ii~~~~~yHG~t  146 (426)
T PRK00062        110 --------------RMVNSGTEATMSAIRLARGYTG-RDKIIKFEGCYHGHA  146 (426)
T ss_pred             --------------EEecCHHHHHHHHHHHHHHHhC-CCeEEEEcCccCCch
Confidence                          4588899888887775443333 567777777666654

>PRK05957 aspartate aminotransferase; Provisional

Probab=96.72  E-value=0.014  Score=59.83  Aligned_cols=106  Identities=21%  Similarity=0.242  Sum_probs=70.0

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDP-KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~-~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      .+++.......+.++|.+...++...|+++ +..++|.       ++++..|+.+.+.|++.+  +-|.....+-|||.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~-------~~~~~~r~~l~~~L~~~~--~~~~~~~~~gg~~~~  322 (389)
T PRK05957        252 LEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHL-------PEIAQVRQILLKSLGQLQ--DRCTLHPANGAFYCF  322 (389)
T ss_pred             HHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHH-------HHHHHHHHHHHHHHHhcC--CCccccCCCeeEEEE
Confidence            355666666666788889999999999874 3333333       446777888999998642  223333456688886


Q ss_pred             c----CCCH-HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHH
Q psy16707         83 T----GLNA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVG  118 (420)
Q Consensus        83 ~----gL~~-~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~  118 (420)
                      +    +++. +-++.|.++++|++.+.        |  |||++.+++..+.
T Consensus       323 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~  373 (389)
T PRK05957        323 LKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAK  373 (389)
T ss_pred             EeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHH
Confidence            5    4444 45677888899999863        1  7777776655433

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=96.72  E-value=0.082  Score=54.75  Aligned_cols=84  Identities=13%  Similarity=0.109  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC------HHHHHHHHHhCCeEEeCCC----cEEEcc-cC
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDG----RISMAG-VT  404 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------~~~v~~Ll~e~~Vy~~p~g----Ris~ag-l~  404 (420)
                      .++++++++++.+.+.|++++....+-......|++.++.++      ...+...+.++||++.+.|    ||+++. ++
T Consensus       303 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t  382 (406)
T PRK12381        303 EMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNIS  382 (406)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCC
Confidence            456888999999999998875322222223355788765432      2344445578999998644    887765 78


Q ss_pred             CCCHHHHHHHHHHHh
Q psy16707        405 SKNVGYLAKAIHAVT  419 (420)
Q Consensus       405 ~~ni~~la~AI~~vv  419 (420)
                      +++|+.+.+++.+++
T Consensus       383 ~~~i~~~~~~l~~~l  397 (406)
T PRK12381        383 EEEITTGLDRFARAC  397 (406)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            889999999888765

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=96.67  E-value=0.13  Score=51.75  Aligned_cols=93  Identities=17%  Similarity=0.059  Sum_probs=57.5

Q ss_pred             cccCCCCCCchHHHHHHHHHHHccC-C-CCCCCCCCC------CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        170 YRDDQGKPYVLPSVKQADEIVLNKN-L-DKEYAPIIG------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       170 y~d~dg~~~~~~~V~~a~~~~~~~~-~-~~~Y~p~~G------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      |.|..+..++++.|++|......+. . .+.+.+..|      ..++|+.+++++ |.+     ++.|            
T Consensus         1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-----~~~v------------   62 (353)
T TIGR03235         1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL-GAD-----TEEV------------   62 (353)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE------------
Confidence            6677777889999999987765321 1 111111112      457778888754 432     2333            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHHhc--CCCC-CEEEEcCCCCCCcHHH
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPGE-KVIYVPTPTWGNHIPI  291 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~g-d~VlvpdP~w~ny~~i  291 (420)
                                +.|.|+|.++.+++..+...  .+ | +.|++++..+|.+...
T Consensus        63 ----------~~~~g~t~a~~~~l~~l~~~~~~~-g~~~vi~~~~~~~s~~~~  104 (353)
T TIGR03235        63 ----------IFTSGATESNNLAILGLARAGEQK-GKKHIITSAIEHPAVLEP  104 (353)
T ss_pred             ----------EEeCCHHHHHHHHHHHHHHhcccC-CCCeeeEcccccHHHHHH
Confidence                      56889999988877644332  23 5 7888887777765433

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=96.65  E-value=0.13  Score=53.62  Aligned_cols=80  Identities=19%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccC----CCCceEEec--CCCHHHHHHHHHhCCeEEeC--------------C
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCYT--GLNATQVEKLIKEHSVYLTK--------------D  395 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~----~q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p--------------~  395 (420)
                      +.++++.+..+.|.+.|++.|.    ..+.    .+.+...+-  +.+...+...+++.||++.+              .
T Consensus       286 ~~~~~l~~~a~~l~~~L~~~G~----~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~  361 (416)
T PRK13034        286 TYAKQVIANAQALAEVLKERGY----DLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSG  361 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCC----EeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCe
Confidence            3446777777778888888883    3322    233333332  33455564555889999974              1


Q ss_pred             CcEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707        396 GRISMAG-----VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 gRis~ag-----l~~~ni~~la~AI~~vv  419 (420)
                      -|+++..     .+++.|+.++++|.+++
T Consensus       362 lR~~~~~~t~~~~~~~di~~l~~~l~~~~  390 (416)
T PRK13034        362 IRIGTPAGTTRGFGEAEFREIANWILDVL  390 (416)
T ss_pred             eEeCcHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            2877654     45699999999999875

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=96.49  E-value=0.29  Score=49.44  Aligned_cols=40  Identities=25%  Similarity=0.383  Sum_probs=31.6

Q ss_pred             HHHHHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        379 TQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       379 ~~v~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +..++| .++||++...|     ||+..|.+.+.++++.++|.++.
T Consensus       316 ~~~~~L-~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         316 FLYSEL-KKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             hHHHHH-HHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            355777 56799975533     89988889999999999998764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PLN02271 serine hydroxymethyltransferase

Probab=96.44  E-value=0.25  Score=53.75  Aligned_cols=85  Identities=19%  Similarity=0.286  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEe----cCCCHHHHHHHHHhCCeEEeC-----------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCY----TGLNATQVEKLIKEHSVYLTK-----------  394 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p-----------  394 (420)
                      .|.+.+.+.+.+.-++|.+.|.+.|.+    .+..  ..=++.+    .|++-..+++++++.||.+-+           
T Consensus       431 ~efk~Ya~QVv~NAkaLA~~L~~~G~~----vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~  506 (586)
T PLN02271        431 PEYKAYMQQVKKNAQALASALLRRKCR----LVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTIS  506 (586)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHCCCe----EeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCC
Confidence            455677778888888999999988843    2221  1122322    256778899999999999843           


Q ss_pred             -CC-cEEEccc-----CCCCHHHHHHHHHHHhC
Q psy16707        395 -DG-RISMAGV-----TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       395 -~g-Ris~agl-----~~~ni~~la~AI~~vv~  420 (420)
                       +| ||....+     .+++++.+|+-|+++++
T Consensus       507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             CCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence             33 8876544     56788999999998863

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=96.32  E-value=0.3  Score=50.93  Aligned_cols=102  Identities=11%  Similarity=0.009  Sum_probs=60.3

Q ss_pred             CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--------C---
Q psy16707        309 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--------N---  377 (420)
Q Consensus       309 pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--------~---  377 (420)
                      ++...+.++...|+.    .++.+.++.++...+.+|+.+.+.++..+    +.......|+|.|+-+        +   
T Consensus       300 ~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~~~----~~~~v~g~G~~~~l~l~~~~~~~~p~~~  371 (425)
T PRK08088        300 GNPIACAAALAVLKV----FEQENLLQKANALGEKLKDGLLAIAEKHP----EIGDVRGLGAMIAIELFEDGDHSKPNAK  371 (425)
T ss_pred             cCHHHHHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEeccceEEEEEEecCCCCCCCCHH
Confidence            344556666655532    13335555555555555555554444433    1112334499998754        1   


Q ss_pred             -HH-HHHHHHHhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        378 -AT-QVEKLIKEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 -~~-~v~~Ll~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                       .. .++.+ .+.||.+.|++      ||+++. +++++|+...+++.+++
T Consensus       372 ~~~~l~~~~-~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l  421 (425)
T PRK08088        372 LTAQIVARA-RDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCF  421 (425)
T ss_pred             HHHHHHHHH-HhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence             22 33444 57798887753      999994 67889999888888775

>PLN02242 methionine gamma-lyase

Probab=96.27  E-value=0.092  Score=54.98  Aligned_cols=38  Identities=11%  Similarity=0.059  Sum_probs=31.9

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +.+.||+.|+.+++..+  +.| ||.|++++|.|+.|...+
T Consensus        95 l~~~sG~~Ai~~al~al--~~~-GD~Vl~~~~~Y~~~~~~~  132 (418)
T PLN02242         95 YCTASGMSAISSVLLQL--CSS-GGHVVASNTLYGGTHALL  132 (418)
T ss_pred             EEEccHHHHHHHHHHHH--hCC-CCEEEEcCCcHHHHHHHH
Confidence            56999999999987644  457 999999999999997765

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=96.25  E-value=0.12  Score=52.95  Aligned_cols=35  Identities=14%  Similarity=0.265  Sum_probs=27.6

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      +.+.||+.|+.++..+   +.| ||.|++++|+|+....
T Consensus        71 ~~~~sG~~ai~~~~~l---l~~-Gd~Vl~~~~~y~~t~~  105 (366)
T PRK08247         71 FACSSGMAAIQLVMSL---FRS-GDELIVSSDLYGGTYR  105 (366)
T ss_pred             EEEcCHHHHHHHHHHH---hCC-CCEEEEecCCcCcHHH
Confidence            5688999999876543   347 8999999999997443

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=96.19  E-value=0.29  Score=49.63  Aligned_cols=92  Identities=21%  Similarity=0.124  Sum_probs=56.0

Q ss_pred             cccCCCCCCchHHHHHHHHHHHccC-CCC-CCCCCC------CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        170 YRDDQGKPYVLPSVKQADEIVLNKN-LDK-EYAPII------GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       170 y~d~dg~~~~~~~V~~a~~~~~~~~-~~~-~Y~p~~------G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      |.|..|-.+.++.|.++......+. .+. +-....      -+.+.|+.+++++ |...    ++.|            
T Consensus         2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l-g~~~----~~~v------------   64 (371)
T PF00266_consen    2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL-GAPP----DEEV------------   64 (371)
T ss_dssp             EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH-TSST----TEEE------------
T ss_pred             EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc-CCcc----cccc------------
Confidence            7788887888999988887765431 100 000111      1246677777765 4331    1233            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcH
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~  289 (420)
                                +.+.|+|.++..++.-+. .+.+ |+.|++.+=.++.-.
T Consensus        65 ----------~~~~~~t~a~~~~~~~l~~~~~~-g~~vl~~~~~~~s~~  102 (371)
T PF00266_consen   65 ----------VFTSNGTEALNAVASSLLNPLKP-GDEVLVTSNEHPSNR  102 (371)
T ss_dssp             ----------EEESSHHHHHHHHHHHHHHHGTT-TCEEEEEESSHHHHH
T ss_pred             ----------ccccccchhhhhhhhcccccccc-ccccccccccccccc
Confidence                      568999999998876552 1456 899999887777666

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=96.17  E-value=0.048  Score=57.83  Aligned_cols=107  Identities=15%  Similarity=0.353  Sum_probs=80.7

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH------
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------   87 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~------   87 (420)
                      .|+++|...-.+++.+|+|+++...|.   ++++++++..|+.+.+.|++.+    |.++.-+-|||.+.-|++      
T Consensus       300 ~~~~~s~~~Q~a~~~~L~~~~~~~~~l---~~~~~~l~~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l~~~~~~~~  372 (468)
T PLN02450        300 SFGLVSSQTQYLLSALLSDKKFTKNYL---EENQKRLKQRQKKLVSGLEAAG----IKCLKSNAGLFCWVDMRHLLKSNT  372 (468)
T ss_pred             hcCCCCHHHHHHHHHHhCCchhHHHHH---HHHHHHHHHHHHHHHHHHHHcC----CcccCCCceEEEEEEchHhcCcCC
Confidence            455567778889999999977655554   4568899999999999998864    556678899999988753      


Q ss_pred             -----HHHHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 -----TQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 -----~qv~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v  127 (420)
                           +-.+.|.++++|.+.+..          ||++++++...++...+.|.++
T Consensus       373 ~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~  427 (468)
T PLN02450        373 FEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSF  427 (468)
T ss_pred             chHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence                 124456678899986642          6888888888877777777665

>PRK06234 methionine gamma-lyase; Provisional

Probab=96.08  E-value=0.017  Score=59.95  Aligned_cols=69  Identities=17%  Similarity=0.182  Sum_probs=52.4

Q ss_pred             CCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707        197 KEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG  274 (420)
Q Consensus       197 ~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~  274 (420)
                      +.|.  |..+..+|+++++++.-+++        +                      +.+.||++|+..++..+  +.| 
T Consensus        56 ~~Y~r~~~p~~~~Le~~iA~~~g~~~--------~----------------------l~~~sG~~Ai~~al~~l--l~~-  102 (400)
T PRK06234         56 YIYSRLGNPTSTEVENKLALLEGGEA--------A----------------------VVAASGMGAISSSLWSA--LKA-  102 (400)
T ss_pred             CcccCCCCccHHHHHHHHHHHhCCCc--------E----------------------EEEcCHHHHHHHHHHHH--hCC-
Confidence            4477  88899999999999874321        1                      57999999998776433  557 


Q ss_pred             CCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        275 EKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       275 gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                      ||.|++++|.|+.+...+    +..|++
T Consensus       103 Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~  130 (400)
T PRK06234        103 GDHVVASDTLYGCTFALLNHGLTRYGVE  130 (400)
T ss_pred             CCEEEEecCccchHHHHHHHHHhhCCeE
Confidence            999999999999877654    445654

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=96.06  E-value=0.022  Score=58.20  Aligned_cols=68  Identities=18%  Similarity=0.165  Sum_probs=52.3

Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEE
Q psy16707        199 YAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVI  278 (420)
Q Consensus       199 Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~V  278 (420)
                      |.+-.+..+|++++++++ |..       ..                      +.+.|||.|+.+++..+ .+.| ||+|
T Consensus        25 ~~~g~~~~~le~~la~~~-g~~-------~~----------------------v~~~sgt~al~~~l~al-~~~~-Gd~V   72 (380)
T TIGR03588        25 LTQGPTVPAFEEALAEYV-GAK-------YA----------------------VAFNSATSALHIACLAL-GVGP-GDRV   72 (380)
T ss_pred             ccCChhHHHHHHHHHHHH-CCC-------eE----------------------EEEcCHHHHHHHHHHHc-CCCC-CCEE
Confidence            444456799999999976 432       11                      34668999999988754 2457 9999


Q ss_pred             EEcCCCCCCcHHHHhhcCcc
Q psy16707        279 YVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       279 lvpdP~w~ny~~i~~~aG~~  298 (420)
                      ++|+|+|+.+...++..|++
T Consensus        73 iv~~~~~~~~~~~~~~~G~~   92 (380)
T TIGR03588        73 WTTPITFVATANCALYCGAK   92 (380)
T ss_pred             EeCCcchHHHHHHHHHcCCE
Confidence            99999999999888888876

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=96.04  E-value=0.021  Score=58.60  Aligned_cols=63  Identities=17%  Similarity=0.250  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCC
Q psy16707        204 GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTP  283 (420)
Q Consensus       204 G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP  283 (420)
                      ...+|++++++++ |..       .+                      +.+.|||.|+.+++..+. +.| ||+|++|+|
T Consensus        34 ~~~~le~~la~~~-g~~-------~~----------------------v~~~sgt~al~lal~al~-~~~-Gd~Viv~~~   81 (379)
T PRK11658         34 KNQALEQAFCQLT-GNQ-------HA----------------------IAVSSATAGMHITLMALG-IGP-GDEVITPSL   81 (379)
T ss_pred             hHHHHHHHHHHHh-CCC-------eE----------------------EEECCHHHHHHHHHHHcC-CCC-CCEEEECCC
Confidence            5799999999866 432       12                      568999999999886542 457 999999999


Q ss_pred             CCCCcHHHHhhcCcc
Q psy16707        284 TWGNHIPICKHTGLE  298 (420)
Q Consensus       284 ~w~ny~~i~~~aG~~  298 (420)
                      +|+.+...+..+|++
T Consensus        82 ~~~~~~~~~~~~G~~   96 (379)
T PRK11658         82 TWVSTLNMIVLLGAT   96 (379)
T ss_pred             cHHHHHHHHHHcCCE
Confidence            999999888888875

>PRK05764 aspartate aminotransferase; Provisional

Probab=96.00  E-value=0.069  Score=54.41  Aligned_cols=114  Identities=17%  Similarity=0.142  Sum_probs=76.1

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      .++++.+.+..+++++......+..+|++   ...|   ++.++++++..|..|.+.|+++  ++ |....-+-|+|.+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~---~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~g~~~~~~  327 (393)
T PRK05764        257 IKAMSKLQSHSTSNPTSIAQYAAVAALNG---PQDE---VEEMRQAFEERRDLMVDGLNEI--PG-LECPKPEGAFYVFP  327 (393)
T ss_pred             HHHHHHHHhhcccCCChHHHHHHHHHHcC---ChHH---HHHHHHHHHHHHHHHHHHHhhC--CC-CcccCCCcceEEEE
Confidence            34566666667777777887888888873   1234   4556777788888888888875  22 55555666777665


Q ss_pred             CCC----------HHHHHHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLN----------ATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~----------~~qv~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      -+.          .+-++.|.++++|++.+.      |  ||+++. +..+++..+++|.++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~  388 (393)
T PRK05764        328 NVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERF  388 (393)
T ss_pred             ecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHH
Confidence            333          233567778899998653      2  888765 667777666666554

>PRK07681 aspartate aminotransferase; Provisional

Probab=95.98  E-value=0.07  Score=54.82  Aligned_cols=104  Identities=16%  Similarity=0.221  Sum_probs=73.3

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVE   91 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~qv~   91 (420)
                      +++.-...++...|.+..   .|.   +.++++++..|..|.+.|++.+    |.....+.|+|.+.-++     .+-++
T Consensus       271 ~~s~~~q~~~~~~l~~~~---~~~---~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~~g~f~~~~l~~~~~~~~~~~  340 (399)
T PRK07681        271 GVFLPIQKAACAALRNGA---AFC---EKNRGIYQERRDTLVDGFRTFG----WNVDKPAGSMFVWAEIPKGWTSLSFAY  340 (399)
T ss_pred             CCCHHHHHHHHHHHhCcH---HHH---HHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeeEEEEECCCCCCHHHHHH
Confidence            455556677788887753   454   4456678888999999998753    55556678999887553     34567


Q ss_pred             HHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhhCCCc
Q psy16707         92 KLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHANGSLP  131 (420)
Q Consensus        92 ~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v~~~p  131 (420)
                      .|.++++|++.+.        |  ||+++ .+...++...+.|.++|-+.
T Consensus       341 ~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~l~~l~~~~~~~  389 (399)
T PRK07681        341 ALMDRANVVVTPGHAFGPHGEGFVRIALV-QDEEVLQQAVENIRNSGIFA  389 (399)
T ss_pred             HHHHhCCEEEeCChhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHhcccc
Confidence            8888899988642        2  77777 35678888888888877544

>PRK07582 cystathionine gamma-lyase; Validated

Probab=95.92  E-value=0.44  Score=48.83  Aligned_cols=59  Identities=14%  Similarity=0.140  Sum_probs=46.1

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707        201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV  280 (420)
Q Consensus       201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv  280 (420)
                      |.....+|.++++++. +.+        .                      +.+.+|+.|+..++..+  +.| ||+|++
T Consensus        49 ~~p~~~~Le~~lA~l~-~~~--------~----------------------v~~~sG~~Ai~~~l~al--l~~-Gd~Vl~   94 (366)
T PRK07582         49 SNPTWRALEAALGELE-GAE--------A----------------------LVFPSGMAAITAVLRAL--LRP-GDTVVV   94 (366)
T ss_pred             CCccHHHHHHHHHHHc-CCC--------E----------------------EEECCHHHHHHHHHHHh--cCC-CCEEEE
Confidence            6778899999999987 432        1                      56888999988776533  457 999999


Q ss_pred             cCCCCCCcHHHHh
Q psy16707        281 PTPTWGNHIPICK  293 (420)
Q Consensus       281 pdP~w~ny~~i~~  293 (420)
                      ++|+|+.|...++
T Consensus        95 ~~~~y~~~~~~~~  107 (366)
T PRK07582         95 PADGYYQVRALAR  107 (366)
T ss_pred             eCCCcHhHHHHHH
Confidence            9999999877553

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=95.91  E-value=0.031  Score=57.62  Aligned_cols=83  Identities=16%  Similarity=0.131  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCCC----cEEEccc-
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----RISMAGV-  403 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~g----Ris~agl-  403 (420)
                      .+.++++++++.|.+.|++++....+....+..|+|.|..+       +.++++.|+ +.||++.|+|    ||+++.. 
T Consensus       304 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~~lRl~~~~~~  382 (403)
T PRK05093        304 EVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVAGPDVLRFAPSLVI  382 (403)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHH-HCCeEEecCCCCEEEEeCCCCC
Confidence            34478899999999999987532112223445688888644       235567775 5799999855    8865555 


Q ss_pred             CCCCHHHHHHHHHHHh
Q psy16707        404 TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv  419 (420)
                      +++.|+++.+++.+++
T Consensus       383 ~~~~i~~~~~~l~~~l  398 (403)
T PRK05093        383 EEADIDEGLARFEKAV  398 (403)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            8888998888887764

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=95.88  E-value=0.49  Score=49.17  Aligned_cols=84  Identities=21%  Similarity=0.381  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC---CCCceEEe----cCCCHHHHHHHHHhCCeEEeCC---------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCY----TGLNATQVEKLIKEHSVYLTKD---------  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~---~q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p~---------  395 (420)
                      -+.+++.+++.+.-.+|.++|.+.|.    ..+.   ... +|.-    .+++-..++.++++.||-+-++         
T Consensus       280 p~fk~Ya~qVv~NAkaLAe~l~~~G~----~vvsGgTdnH-l~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p  354 (413)
T COG0112         280 PEFKEYAKQVVKNAKALAEALKERGF----KVVSGGTDNH-LVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESP  354 (413)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCC----eEecCCccce-EEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCC
Confidence            44566667778888899999998883    3332   111 2221    1566789999999999999653         


Q ss_pred             ----C-cEEEccc-----CCCCHHHHHHHHHHHhC
Q psy16707        396 ----G-RISMAGV-----TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 ----g-Ris~agl-----~~~ni~~la~AI~~vv~  420 (420)
                          | ||....+     .+++.+++|+-|.+|+.
T Consensus       355 ~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~  389 (413)
T COG0112         355 FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD  389 (413)
T ss_pred             CCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence                3 8876654     45578899999998863

>PLN02651 cysteine desulfurase

Probab=95.82  E-value=0.63  Score=47.13  Aligned_cols=91  Identities=20%  Similarity=0.105  Sum_probs=56.7

Q ss_pred             cccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC-----C------CHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        170 YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII-----G------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       170 y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~-----G------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      |.|..+-.++++.|.+|......+   +.-.|..     +      ..++|+.+++++ |.+     ++.|         
T Consensus         2 Yld~a~~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~-----~~~v---------   63 (364)
T PLN02651          2 YLDMQATTPIDPRVLDAMLPFLIE---HFGNPHSRTHLYGWESEDAVEKARAQVAALI-GAD-----PKEI---------   63 (364)
T ss_pred             cccCcCCCCCCHHHHHHHHHHHHh---CCCCCChhhhHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE---------
Confidence            778888778889999988765432   1111211     1      345566676643 432     2333         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHH
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                                   +.|.|||.++.+++..+..  ..+ ||.|++++-.++++...+
T Consensus        64 -------------~~t~~~t~a~~~~l~~~~~~~~~~-g~~vl~~~~~h~s~~~~~  105 (364)
T PLN02651         64 -------------IFTSGATESNNLAIKGVMHFYKDK-KKHVITTQTEHKCVLDSC  105 (364)
T ss_pred             -------------EEeCCHHHHHHHHHHHHHHhccCC-CCEEEEcccccHHHHHHH
Confidence                         5688999998877654322  235 899999997777654433

>PTZ00377 alanine aminotransferase; Provisional

Probab=95.77  E-value=0.088  Score=55.80  Aligned_cols=117  Identities=12%  Similarity=0.153  Sum_probs=78.0

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccce
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF   80 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmF   80 (420)
                      .++..+.. .+.+++..+-.++..+|+++    ...+.|.++++.++.+++..|..+.+.|++.  ++ |....-|-|||
T Consensus       323 ~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~--~g-~~~~~p~gg~f  398 (481)
T PTZ00377        323 EQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI--EG-VSCQPVEGAMY  398 (481)
T ss_pred             HHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-cEeecCCeeEE
Confidence            34444443 34457777888888899764    3456799999999999999999999999865  33 77777888999


Q ss_pred             eecCC--CH---------------HHHHHHHHhcceEEcCCC-----------ceecccCCcCCHHHHHHHHHh
Q psy16707         81 CYTGL--NA---------------TQVEKLIKEHSVYLTKDG-----------RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        81 s~~gL--~~---------------~qv~~L~~~~~IY~~~~G-----------Rinvagl~~~ni~~va~ai~~  126 (420)
                      .+.-+  .+               +-+..|-++++|-+.+..           |||++ .+..+++...+.|.+
T Consensus       399 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~  471 (481)
T PTZ00377        399 AFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKE  471 (481)
T ss_pred             EEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHH
Confidence            98433  21               224566678888876422           45655 444444444444433

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=95.69  E-value=0.11  Score=52.60  Aligned_cols=107  Identities=13%  Similarity=0.210  Sum_probs=66.6

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      +++...+....++|.....++..+|.++    +|   ++.++.+++..|..+.+.|++.+    |....-+.|||.+..+
T Consensus       244 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  312 (364)
T PRK07865        244 ELLEVRKHAGMMVPAPVQAAMVAALGDD----AH---VREQRERYARRRAVLRPALEAAG----FRVDHSEAGLYLWATR  312 (364)
T ss_pred             HHHHHHHhcCCCcCHHHHHHHHHHhCCH----HH---HHHHHHHHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeC
Confidence            3444333333455666777788888873    23   45667777888999999998753    4444567899988765


Q ss_pred             C--HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHH
Q psy16707         86 N--ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus        86 ~--~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai  124 (420)
                      .  ..++..+-++++|++.+.        +  ||++++ +..+++..++.|
T Consensus       313 ~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l  362 (364)
T PRK07865        313 GEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERL  362 (364)
T ss_pred             CCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHh
Confidence            3  334433336789998652        1  677765 455555554443

>PRK09105 putative aminotransferase; Provisional

Probab=95.67  E-value=0.11  Score=53.05  Aligned_cols=100  Identities=16%  Similarity=0.212  Sum_probs=67.4

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee-cCCCHHHH-H
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLNATQV-E   91 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~-~gL~~~qv-~   91 (420)
                      .++++|..+..++...|.++    +|.   +.++++++..|+.+.+.|++.+    |..+..+-|+|.+ ++.+.+++ +
T Consensus       259 ~~~~~~~~~~~aa~~~L~~~----~~~---~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~~f~~~~~~~~~~~l~~  327 (370)
T PRK09105        259 GHNPLPVPAAAAGLASLRDP----KLV---PQRRAENAAVREDTIAWLKKKG----YKCTPSQANCFMVDVKRPAKAVAD  327 (370)
T ss_pred             CCCCcCHHHHHHHHHHHhCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CCcCCCCCcEEEEeCCCCHHHHHH
Confidence            45667888888888889874    454   4455677888999999998753    5555556666653 13344444 4


Q ss_pred             HHHHhcceEEc-------CCCceecccCCcCCHHHHHHHHHhh
Q psy16707         92 KLIKEHSVYLT-------KDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        92 ~L~~~~~IY~~-------~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      .|. +++|++.       .--||+++  ++.++++++++++++
T Consensus       328 ~L~-~~gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~  367 (370)
T PRK09105        328 AMA-KQGVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKV  367 (370)
T ss_pred             HHH-HCCcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHH
Confidence            565 5599882       12366666  467899999999875

>PRK07682 hypothetical protein; Validated

Probab=95.63  E-value=0.12  Score=52.50  Aligned_cols=110  Identities=17%  Similarity=0.169  Sum_probs=72.1

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--   83 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--   83 (420)
                      .++.+....+.++|.....++..+|++.+   .|   ++.++++++..|..+.+.|++.+    +....-+-|||.+.  
T Consensus       247 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~---~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~g~~~~~~~~  316 (378)
T PRK07682        247 AMLKIHQYSMMCAPTMAQFAALEALRAGN---DD---VIRMRDSYRKRRNFFVTSFNEIG----LTCHVPGGAFYAFPSI  316 (378)
T ss_pred             HHHHHHHhhccCCCHHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHHHHCC----CccCCCCeeEEEEEec
Confidence            44444444445677777788888887642   24   67788888899999999998763    44455678899886  


Q ss_pred             ---CCCHHHHH-HHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHh
Q psy16707         84 ---GLNATQVE-KLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        84 ---gL~~~qv~-~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~  126 (420)
                         +.+.++.. .|.++++|++.+.        |  |||++. +...++...+.|.+
T Consensus       317 ~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~  372 (378)
T PRK07682        317 SSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKR  372 (378)
T ss_pred             cCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHH
Confidence               34555554 5667889998752        2  677764 44454444444443

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=95.51  E-value=0.029  Score=59.06  Aligned_cols=63  Identities=16%  Similarity=0.161  Sum_probs=49.9

Q ss_pred             CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHH-------hcCCCCCE
Q psy16707        205 APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK-------NFFPGEKV  277 (420)
Q Consensus       205 ~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~-------~~~p~gd~  277 (420)
                      ..+|++++++++ |.+       .+                      +.+.|||.|+.+++..+.       .+.| ||+
T Consensus        65 ~~~fe~~lA~~~-g~~-------~~----------------------v~~~sGt~al~~aL~al~~~~~~~~~~~p-Gd~  113 (438)
T PRK15407         65 NDAFEKKLAEFL-GVR-------YA----------------------LLVNSGSSANLLAFSALTSPKLGDRALKP-GDE  113 (438)
T ss_pred             HHHHHHHHHHHh-CCC-------eE----------------------EEECCHHHHHHHHHHHHhhccccccCCCC-CCE
Confidence            378999999876 432       22                      568999999998876542       3467 999


Q ss_pred             EEEcCCCCCCcHHHHhhcCcc
Q psy16707        278 IYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       278 VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      |++|+|+|+.+...+...|++
T Consensus       114 VIv~~~t~~a~~~~v~~~G~~  134 (438)
T PRK15407        114 VITVAAGFPTTVNPIIQNGLV  134 (438)
T ss_pred             EEECCCCcHHHHHHHHHcCCE
Confidence            999999999999988888885

>PRK08068 transaminase; Reviewed

Probab=95.36  E-value=0.16  Score=51.98  Aligned_cols=108  Identities=18%  Similarity=0.285  Sum_probs=66.7

Q ss_pred             HHHHHHhhccC-CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          5 NAKKILIRAFY-SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         5 ~~l~~i~R~~y-S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ..++.+....+ |++|.....+.+.+++++       +.++.++++++..|..+.+.|++.+    |....-+-|+|.+.
T Consensus       260 ~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~~r~~~~~~L~~~g----~~~~~~~g~~~~~v  328 (389)
T PRK08068        260 EAINLLQDHLFVSLFGAIQDAAIEALLSDQ-------SCVAELVARYESRRNAFISACREIG----WEVDAPKGSFFAWM  328 (389)
T ss_pred             HHHHHHHhhccCCCChHHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEE
Confidence            34444444433 334444444444555543       3466778899999999999998763    65555577888776


Q ss_pred             CC----CHHHH-HHHHHhcceEEcCC------C----ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GL----NATQV-EKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL----~~~qv-~~L~~~~~IY~~~~------G----Rinvagl~~~ni~~va~ai~~v  127 (420)
                      -+    +.+++ +.|.++++|++.+.      |    ||+++ .+.   +.+.+++...
T Consensus       329 ~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~---~~l~~al~~l  383 (389)
T PRK08068        329 PVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL-TDE---ERLREAVERI  383 (389)
T ss_pred             ECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc-CCH---HHHHHHHHHH
Confidence            44    44444 67777899999552      1    67774 332   5666666554

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=95.26  E-value=1.6  Score=46.62  Aligned_cols=83  Identities=22%  Similarity=0.367  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceE--Ee--cCCCHHHHHHHHHhCCeEEeCC------------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMF--CY--TGLNATQVEKLIKEHSVYLTKD------------  395 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF--~~--~~l~~~~v~~Ll~e~~Vy~~p~------------  395 (420)
                      .+..++++.+.-+.|.+.|++.|    +..+.  .+..+.  .+  .+++..+++..+++.||.+-++            
T Consensus       312 ~~~~~~~~~~na~~L~~~L~~~G----~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~  387 (475)
T PLN03226        312 FKAYQKQVKANAAALANRLMSKG----YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPG  387 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC----CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCC
Confidence            34556777888888888888877    34332  122333  23  3567788888889999998542            


Q ss_pred             -CcE-----EEcccCCCCHHHHHHHHHHHhC
Q psy16707        396 -GRI-----SMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 -gRi-----s~agl~~~ni~~la~AI~~vv~  420 (420)
                       .|+     --.|+++++++++++.|+++++
T Consensus       388 giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~  418 (475)
T PLN03226        388 GVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT  418 (475)
T ss_pred             CcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence             255     3356677889999999998863

>PRK09148 aminotransferase; Validated

Probab=95.14  E-value=0.21  Score=51.55  Aligned_cols=109  Identities=16%  Similarity=0.209  Sum_probs=68.2

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      +.++.+....-.+++.-...++..+|+++      .+.++.++++++..|..|.+.|++.+    |..+.-+-|||.+..
T Consensus       258 ~~l~~~~~~~~~~~~~~~q~~~~~~L~~~------~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~  327 (405)
T PRK09148        258 AALTRVKSYLDYGAFTPIQVAATAALNGP------QDCIAEMRELYKKRRDVLVESFGRAG----WDIPPPAASMFAWAP  327 (405)
T ss_pred             HHHHHHHHHhccCCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHcC----CccCCCCeeEEEEEE
Confidence            34444433222233444556677788764      23456677888899999999998753    555567899999987


Q ss_pred             CCH-------HHH-HHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNA-------TQV-EKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~-------~qv-~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.+       ++. +.|.++.+|.+.+.        |  ||+++ .   +-+.+.+++..+
T Consensus       328 l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~---~~~~l~~al~~l  384 (405)
T PRK09148        328 IPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-E---NEQRIRQAARNI  384 (405)
T ss_pred             CCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-C---CHHHHHHHHHHH
Confidence            642       333 55667889988763        2  55553 2   345555555444

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=95.09  E-value=0.25  Score=50.89  Aligned_cols=116  Identities=12%  Similarity=0.122  Sum_probs=69.5

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV-KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el-~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      +..+......+++..+..++...|.+.++.+.+.+++ +..++|...+++.|.+.|.    ...|..+.-+-|+|-+.-+
T Consensus       270 ~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~----~~~~~~~~p~gg~fiw~~~  345 (416)
T PRK09440        270 LSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLP----DEPCLIHKPEGAIFLWLWF  345 (416)
T ss_pred             HHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCCeEEecCCCceEEEEEC
Confidence            3333333334678888999999999987666555543 2344454445544444332    1224444567789988743


Q ss_pred             -----CHHHHHHHHHhcceEEcCC-----C------------ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 -----NATQVEKLIKEHSVYLTKD-----G------------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 -----~~~qv~~L~~~~~IY~~~~-----G------------Rinvagl~~~ni~~va~ai~~v  127 (420)
                           +.+++...-++++|-+.+.     |            ||++++ +.++++...+.|.++
T Consensus       346 ~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~  408 (416)
T PRK09440        346 KDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEE  408 (416)
T ss_pred             CCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHHH
Confidence                 4455554446789987641     1            778776 666766666666554

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=95.06  E-value=0.18  Score=52.10  Aligned_cols=81  Identities=15%  Similarity=0.126  Sum_probs=55.0

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----------
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------   86 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----------   86 (420)
                      +++.-...++...|.+.  .+.|   ++.++++++..|..|.+.|++..   .+..+..+.|||.+..+.          
T Consensus       286 ~~~~~~q~a~~~~l~~~--~~~~---~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~p~gg~f~~~~l~~~~~~~~~~~  357 (412)
T PTZ00433        286 GPCSVVQAALGEALLNT--PQEH---LEQIVAKLEEGAMVLYNHIGECI---GLSPTMPRGSMFLMSRLDLEKFRDIKSD  357 (412)
T ss_pred             CCChHHHHHHHHHHhcC--cHHH---HHHHHHHHHHHHHHHHHHHhcCC---CCcccCCCeeEEEEEEechhhcCCCCCH
Confidence            44445555555666542  2445   55567778888999999997642   255667788999987553          


Q ss_pred             HHHHHHHHHhcceEEcCCC
Q psy16707         87 ATQVEKLIKEHSVYLTKDG  105 (420)
Q Consensus        87 ~~qv~~L~~~~~IY~~~~G  105 (420)
                      .+-++.|.++++|++.+..
T Consensus       358 ~~~~~~ll~~~gV~v~pg~  376 (412)
T PTZ00433        358 VEFYEKLLEEENVQVLPGE  376 (412)
T ss_pred             HHHHHHHHHhcCEEEeCcc
Confidence            3567788888999987643

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=94.88  E-value=0.051  Score=55.60  Aligned_cols=45  Identities=20%  Similarity=0.249  Sum_probs=38.3

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.|||.|+.+++..+ .+.| ||+|++|+|+|+.+...+..+|++
T Consensus        50 v~~~sgt~al~~~l~~~-~~~~-Gd~Viv~~~t~~~~~~~~~~~G~~   94 (375)
T PRK11706         50 LLTPSCTAALEMAALLL-DIQP-GDEVIMPSYTFVSTANAFVLRGAK   94 (375)
T ss_pred             EEECCHHHHHHHHHHHh-CCCC-CCEEEECCCCcHHHHHHHHHcCCE
Confidence            66999999998876543 2457 999999999999999999999886

>PLN02231 alanine transaminase

Probab=94.83  E-value=0.35  Score=52.40  Aligned_cols=87  Identities=13%  Similarity=0.251  Sum_probs=66.3

Q ss_pred             cCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--cCCCH
Q psy16707         14 FYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLNA   87 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~gL~~   87 (420)
                      ...+++.-+-.++..++++|    .-..+|.+|++.+++.+++.|..+++.|++.  +| |....-|-|||.+  +.|.+
T Consensus       383 ~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~--~g-i~~~~p~Ggfylw~~l~lp~  459 (534)
T PLN02231        383 VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL--EG-VTCNKAEGAMYLFPRIHLPQ  459 (534)
T ss_pred             hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCeeeEEeccccCcH
Confidence            34467777888888899875    3567889999999999999999999999875  22 6666789999999  55443


Q ss_pred             H---------------HHHHHHHhcceEEcC
Q psy16707         88 T---------------QVEKLIKEHSVYLTK  103 (420)
Q Consensus        88 ~---------------qv~~L~~~~~IY~~~  103 (420)
                      .               -+.+|.++++|.+++
T Consensus       460 ~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvP  490 (534)
T PLN02231        460 KAIKAAEAAKTAPDAFYCKRLLNATGIVVVP  490 (534)
T ss_pred             HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeC
Confidence            2               135577888998764

>PLN00144 acetylornithine transaminase

Probab=94.57  E-value=0.18  Score=52.01  Aligned_cols=104  Identities=11%  Similarity=0.237  Sum_probs=61.8

Q ss_pred             hccCCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--H
Q psy16707        304 AFYSSPPIHGARIVQ---EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--A  378 (420)
Q Consensus       304 ~~~s~pp~~ga~iv~---~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~  378 (420)
                      ++|+.+|.. +.++.   .++.+    .++.+.++.+.+.+   ++.+.+.+++.+.   ...+ ...|+|.|+-++  .
T Consensus       264 ~T~~~~pl~-~aaa~a~l~~i~~----~~~~~~~~~~g~~l---~~~l~~~~~~~~~---~~~v-rg~G~~~~l~l~~~~  331 (382)
T PLN00144        264 STFAGGPLV-CNAALAVLDKISK----PGFLASVAKKGEYL---RELLRRKLGGNPH---VKEV-RGVGLLVGIQLDVPA  331 (382)
T ss_pred             CCCCCCHHH-HHHHHHHHHHHhh----chHHHHHHHHHHHH---HHHHHHHHhhCCC---ceee-ecCceEEEEEecCcc
Confidence            455554544 44444   23433    23445555555555   3344444444321   1122 248999987553  3


Q ss_pred             HHHHHHHHhCCeEEeCCC-----cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        379 TQVEKLIKEHSVYLTKDG-----RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       379 ~~v~~Ll~e~~Vy~~p~g-----Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +.+...+.+.||.+.|++     ||+.+. +++++++...+++.+++
T Consensus       332 ~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l  378 (382)
T PLN00144        332 GPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCL  378 (382)
T ss_pred             HHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence            334333468999998864     799998 78999999999998876

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=94.51  E-value=1.6  Score=46.86  Aligned_cols=81  Identities=17%  Similarity=0.286  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceEEe-cCCC---HHHHHHHHHhCCeEEeC-------CC-----
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCY-TGLN---ATQVEKLIKEHSVYLTK-------DG-----  396 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF~~-~~l~---~~~v~~Ll~e~~Vy~~p-------~g-----  396 (420)
                      +..++++.+.-..|.+.|++.|.    ..+.  .....+.. ++-.   ...+.+.+++.||++.+       .|     
T Consensus       338 ~~y~~~l~~Na~~La~~L~~~G~----~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~s  413 (493)
T PRK13580        338 QKYAQQVVDNARALAEGFLKRGA----RLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTS  413 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC----CccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCc
Confidence            34557777777788888888884    3221  23344432 3322   24566677899999963       12     


Q ss_pred             --cEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707        397 --RISMAGVT-----SKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 --Ris~agl~-----~~ni~~la~AI~~vv  419 (420)
                        ||++..++     ++.+++++++|.+++
T Consensus       414 rLRIg~~A~ttrg~teedi~~iad~l~~~l  443 (493)
T PRK13580        414 GIRLGTPALTTLGMGSDEMDEVAELIVKVL  443 (493)
T ss_pred             eEEeccchhhhcCCCHHHHHHHHHHHHHHH
Confidence              88877544     688999999998875

>PRK07324 transaminase; Validated

Probab=94.48  E-value=0.34  Score=49.47  Aligned_cols=97  Identities=15%  Similarity=0.116  Sum_probs=63.3

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HHHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQV   90 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~qv   90 (420)
                      .+++..+..++...|++      +.+-++.|++.++..|..|.+.|++.+   .+..+.-+-|||.|.-++     .+-+
T Consensus       253 ~~~~~~~q~~a~~~l~~------~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~~p~gg~~~~i~~~~~~~~~~~~  323 (373)
T PRK07324        253 ICAGVFDDMLASLALEH------RDAILERNRKIVRTNLAILDEWVAKEP---RVSYVKPKAVSTSFVKLDVDMPSEDFC  323 (373)
T ss_pred             ecCChHHHHHHHHHHcC------HHHHHHHHHHHHHHHHHHHHHHHhcCC---CceEECCCceEEEEEEeCCCCCHHHHH
Confidence            45556666677777764      345567778888888888888887642   244455677887776543     3445


Q ss_pred             HHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHH
Q psy16707         91 EKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIH  125 (420)
Q Consensus        91 ~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~  125 (420)
                      ++|.++++|.+.+..        ||+++. +   -+.+.+++.
T Consensus       324 ~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~---~~~l~~~l~  362 (373)
T PRK07324        324 LKLLKETGVLLVPGNRFDLEGHVRIGYCC-D---TETLKKGLK  362 (373)
T ss_pred             HHHHHhcCEEEECccccCCCCeEEEEecC-C---HHHHHHHHH
Confidence            777788999988754        667654 2   344444443

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=94.45  E-value=0.26  Score=50.72  Aligned_cols=80  Identities=21%  Similarity=0.305  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--H-HHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCH
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKDG----RISMA-GVTSKNV  408 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~-~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni  408 (420)
                      +.++.+++++.|.+.|++++.+. +. ..+..|.|.++.++  . +++++| .++||++.+.+    ||+.. ..+.+.+
T Consensus       308 l~~~~~~~~~~l~~~L~~l~~~~-i~-~~~~~g~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~iRi~p~l~~t~e~i  384 (396)
T PRK04073        308 LPERSLELGEYFKEQLKEIDNPM-IK-EVRGRGLFIGVELNEPARPYCEAL-KEEGLLCKETHETVIRFAPPLVITKEEL  384 (396)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCc-cc-ceecceEEEEEEecchHHHHHHHH-HHCCeEEecCCCCEEEEECCcccCHHHH
Confidence            34677788999999998875321 22 22345777765442  3 455666 56899998743    77742 3789999


Q ss_pred             HHHHHHHHHHh
Q psy16707        409 GYLAKAIHAVT  419 (420)
Q Consensus       409 ~~la~AI~~vv  419 (420)
                      +++.+++++++
T Consensus       385 ~~~~~~l~~~l  395 (396)
T PRK04073        385 DWAFEKIKAVL  395 (396)
T ss_pred             HHHHHHHHHHh
Confidence            99999999876

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=94.44  E-value=0.4  Score=48.51  Aligned_cols=104  Identities=18%  Similarity=0.233  Sum_probs=64.8

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .+..+.+....+|+..+..++...|.+.    .|   ++.++.+++..|..+.+.|++.+    ++...-+-|+|.+.-+
T Consensus       238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~~~~~~~~L~~~g----~~~~~p~~~~~~~~~~  306 (357)
T TIGR03539       238 ELLTVRKHAGLMVPAPVQAAMVAALGDD----GH---VAEQKARYAARRAQLKPALEKAG----FRIDHSEAGLYLWATR  306 (357)
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHcCCH----HH---HHHHHHHHHHHHHHHHHHHHHcC----CCCcCCCccEEEEEEC
Confidence            3444444444456666667777888762    22   45567777788888888888753    3445567899988865


Q ss_pred             --CHHHHHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHH
Q psy16707         86 --NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus        86 --~~~qv~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai  124 (420)
                        +..++..+-++++|.+.+..          ||+++. ++   +.+.++|
T Consensus       307 ~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~---~~i~~~~  353 (357)
T TIGR03539       307 GEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TD---ERIAAAV  353 (357)
T ss_pred             CCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CH---HHHHHHH
Confidence              44455444478899887632          677665 33   4444444

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK09028 cystathionine beta-lyase; Provisional

Probab=94.32  E-value=0.12  Score=53.77  Aligned_cols=64  Identities=11%  Similarity=0.088  Sum_probs=47.5

Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707        196 DKEYAPII--GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP  273 (420)
Q Consensus       196 ~~~Y~p~~--G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p  273 (420)
                      .+.|+...  +...|+++++++.-+.+        +                      +.+.||++|+..++..+  +.|
T Consensus        52 ~~~Y~r~~npt~~~Le~~iA~le~~~~--------~----------------------~~~~sG~~Ai~~~l~al--l~~   99 (394)
T PRK09028         52 EMFYGRRGTPTHFAFQAAIVELEGGAG--------T----------------------ALYPSGAAAISNALLSF--LKA   99 (394)
T ss_pred             CceecCCCCchHHHHHHHHHHHhCCCc--------E----------------------EEECCHHHHHHHHHHHH--hCC
Confidence            36688643  34699999999863322        2                      57999999999877533  557


Q ss_pred             CCCEEEEcCCCCCCcHHHH
Q psy16707        274 GEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       274 ~gd~VlvpdP~w~ny~~i~  292 (420)
                       ||.|++++|.|+.+..++
T Consensus       100 -GD~Vvv~~~~Y~~t~~l~  117 (394)
T PRK09028        100 -GDHLLMVDSCYEPTRDLC  117 (394)
T ss_pred             -CCEEEEECCCcHHHHHHH
Confidence             999999999997777544

>PRK08175 aminotransferase; Validated

Probab=94.28  E-value=0.45  Score=48.84  Aligned_cols=73  Identities=18%  Similarity=0.287  Sum_probs=50.8

Q ss_pred             HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-------HHH-HHH
Q psy16707         22 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------TQV-EKL   93 (420)
Q Consensus        22 Ga~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-------~qv-~~L   93 (420)
                      ...++...|.++      .+.++.++++++..|..+.+.|++.+    |.....+.|||-+.-|.+       +.+ +.|
T Consensus       274 ~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l  343 (395)
T PRK08175        274 LQVAAIAALEGD------QQCVRDIAEQYKRRRDVLVKGLHEAG----WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKL  343 (395)
T ss_pred             HHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCEEEEEEEECCcccCCCCHHHHHHHH
Confidence            344445555542      34577788899999999999998762    544556689999987653       344 456


Q ss_pred             HHhcceEEcCC
Q psy16707         94 IKEHSVYLTKD  104 (420)
Q Consensus        94 ~~~~~IY~~~~  104 (420)
                      .++++|++.+.
T Consensus       344 ~~~~gv~v~p~  354 (395)
T PRK08175        344 LNEAKVCVSPG  354 (395)
T ss_pred             HHhCCEEEeCc
Confidence            67899998764

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=94.25  E-value=0.41  Score=48.99  Aligned_cols=82  Identities=16%  Similarity=0.178  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-------CCceEEec-CCCHHHH-HHHHHhCCeEEeCC--------C
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-------QIGMFCYT-GLNATQV-EKLIKEHSVYLTKD--------G  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-------q~GmF~~~-~l~~~~v-~~Ll~e~~Vy~~p~--------g  396 (420)
                      ++.+.+|.++..+.+++.|++.+.   +..+..       ..+.|++. |.+.+++ +.| +++||.+.++        -
T Consensus       259 ~e~~~~r~~~l~~~l~~~l~~~~~---~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L-~~~gI~i~~~~~~l~~~~v  334 (361)
T TIGR01366       259 LDWAVARTADSSSRLYSWAQERPY---ATPFVTDPGKRSQVVGTIDFVDDIDAATVAKIL-RANGIVDTEPYRKLGRNQL  334 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCC---cccCCCChhhcccceEEEECCCccCHHHHHHHH-HHCCCeeccCccccCCCcE
Confidence            566678899999999999998874   222211       11556664 4566666 555 7789999875        2


Q ss_pred             cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        397 RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                      |||+.+- +.++|+.+.++|++++
T Consensus       335 Ris~~~~~t~~di~~l~~al~~~~  358 (361)
T TIGR01366       335 RVAMFPAIDPDDVEALTECVDWVV  358 (361)
T ss_pred             EEEcCCCCCHHHHHHHHHHHHHHH
Confidence            9999884 6788999999999875

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=94.13  E-value=0.54  Score=47.85  Aligned_cols=96  Identities=16%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHH
Q psy16707         18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEK   92 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~   92 (420)
                      ++..-...+...|.+      +...++.++++++..|+.|.+.|++.+    +.....+-|+|-+.-+    +.++ ++.
T Consensus       272 ~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~  341 (385)
T PRK09276        272 VFQAIQEAGIAALNG------PQEVVEELRKIYQERRDILVEGLRKLG----LEVEPPKATFYVWAPVPKGYTSAEFATL  341 (385)
T ss_pred             CCHHHHHHHHHHHcC------cHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEECCCCCCHHHHHHH
Confidence            333334455666654      234456678888999999999998753    4444456677766654    3444 577


Q ss_pred             HHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         93 LIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        93 L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      |.++++|++.+.        |  ||+++ .++   +.+.++|...
T Consensus       342 ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~---~~l~~~l~~l  382 (385)
T PRK09276        342 LLDKAGVVVTPGNGFGEYGEGYFRIALT-VPD---ERIEEAVERI  382 (385)
T ss_pred             HHHhCCEEECCchhhCCCCCCeEEEEeC-CCH---HHHHHHHHHH
Confidence            878899998763        2  67764 333   4666666544

>PRK07050 cystathionine beta-lyase; Provisional

Probab=94.05  E-value=0.13  Score=53.30  Aligned_cols=44  Identities=14%  Similarity=0.190  Sum_probs=34.7

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~  298 (420)
                      +.+.||+.|+.+++..+  +.| ||.|++++|+|+.+...    ++..|++
T Consensus        84 l~~~sgt~Ai~~~l~al--~~~-GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~  131 (394)
T PRK07050         84 LLQPSGLAAISLVYFGL--VKA-GDDVLIPDNAYGPNRDHGEWLARDFGIT  131 (394)
T ss_pred             EEeccHHHHHHHHHHHH--hCC-CCEEEEecCCcccHHHHHHHHHHhcCeE
Confidence            67999999999988655  457 99999999999987743    3445654

>PRK09082 methionine aminotransferase; Validated

Probab=93.98  E-value=0.5  Score=48.34  Aligned_cols=88  Identities=10%  Similarity=0.067  Sum_probs=58.3

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---   83 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---   83 (420)
                      ++.+.+..-.++|.....+++.+|.+   ..+|   ++.+++.++..|..+.+.|++.+    |.....+.|||.+.   
T Consensus       258 ~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~---~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~g~~~~~~~~~  327 (386)
T PRK09082        258 FRKVHQYNTFTVNTPAQLALADYLRA---EPEH---YLELPAFYQAKRDRFRAALANSR----FKLLPCEGTYFQLVDYS  327 (386)
T ss_pred             HHHHHhhhcCCCChHHHHHHHHHHhC---ChHH---HHHHHHHHHHHHHHHHHHHHhCC----CcccCCCeeEEEEEecc
Confidence            34444433345677777778888863   1233   44567788888999999998743    55566688998875   


Q ss_pred             ---CCCHHHH-HHHHHhcceEEcCC
Q psy16707         84 ---GLNATQV-EKLIKEHSVYLTKD  104 (420)
Q Consensus        84 ---gL~~~qv-~~L~~~~~IY~~~~  104 (420)
                         +.+.+++ +.|.++++|.+.+.
T Consensus       328 ~~~~~~~~~~~~~l~~~~~v~v~pg  352 (386)
T PRK09082        328 AISDLDDVEFCQWLTREHGVAAIPL  352 (386)
T ss_pred             ccCCCCHHHHHHHHHHhCCEEEeCc
Confidence               4456666 45678999987553

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=93.95  E-value=0.21  Score=51.39  Aligned_cols=45  Identities=20%  Similarity=0.249  Sum_probs=38.4

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.|.|||.|+.+++..+ .+.| ||+|++|+|+|+.+...+...|++
T Consensus        50 v~~~sgt~aL~~~l~al-~~~p-Gd~Viv~~~t~~~~~~~~~~~G~~   94 (376)
T TIGR02379        50 LLTPSCTAALEMAALLL-DIQP-GDEVIMPSYTFVSTANAFVLRGAK   94 (376)
T ss_pred             EEeCCHHHHHHHHHHHc-CCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence            66999999999887644 2557 999999999999999888888876

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK06855 aminotransferase; Validated

Probab=93.92  E-value=0.55  Score=49.12  Aligned_cols=103  Identities=8%  Similarity=0.071  Sum_probs=69.3

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHH-------
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNAT-------   88 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~-------   88 (420)
                      .+++...-.++...|.+++.    .+-++++++.++..|..+.+.|++.  ++ |....-+-|||.++-|.+.       
T Consensus       281 ~~~~~~~Q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~L~~~--~~-~~~~~p~gg~~~w~~l~~~~~~~~~~  353 (433)
T PRK06855        281 VCSTTLPQMAIPRIMSHPEY----KNYLKERNKRYEKRSNIAYEKLKDV--PG-LKVNRTNGAFYMTVVFEDGVLNNKQS  353 (433)
T ss_pred             cCCChHHHHHHHHhhcCCcH----HHHHHHHHHHHHHHHHHHHHHHhcC--CC-eeccCCCeeEEEeecccccccccccc
Confidence            45666777888888887543    3455666778888899999999764  33 6656678889999877642       


Q ss_pred             -------------------------HHHHHHHhcceEEcCC---------CceecccCCcCCHHHHHHHHH
Q psy16707         89 -------------------------QVEKLIKEHSVYLTKD---------GRISMAGVTSKNVGYLAKAIH  125 (420)
Q Consensus        89 -------------------------qv~~L~~~~~IY~~~~---------GRinvagl~~~ni~~va~ai~  125 (420)
                                               -+..|-++++|.+++.         =||++++.+...++.-++.|.
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~  424 (433)
T PRK06855        354 LPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLA  424 (433)
T ss_pred             CCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHH
Confidence                                     2345667889987644         267777766555544444443

>PRK08636 aspartate aminotransferase; Provisional

Probab=93.80  E-value=0.65  Score=47.81  Aligned_cols=76  Identities=17%  Similarity=0.347  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-------HHH-HHHHHhcceEEcCCC---------
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-------TQV-EKLIKEHSVYLTKDG---------  105 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-------~qv-~~L~~~~~IY~~~~G---------  105 (420)
                      ++.+++.++..|..|.+.|++.+    |.+..-+.|||.++.|++       +++ +.|.++++|.+.+..         
T Consensus       300 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~  375 (403)
T PRK08636        300 VEEIRETYRKRRDVLIESFANAG----WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEY  375 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCe
Confidence            55567788888999999998752    666667899999998862       444 456778999986641         


Q ss_pred             -ceecccCCcCCHHHHHHHHHh
Q psy16707        106 -RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus       106 -Rinvagl~~~ni~~va~ai~~  126 (420)
                       ||+++ .+.   +.+.++++.
T Consensus       376 iRi~~~-~~~---~~l~~~~~r  393 (403)
T PRK08636        376 VRIALI-ENE---NRIRQAARN  393 (403)
T ss_pred             EEEEec-CCH---HHHHHHHHH
Confidence             67775 443   444444443

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=93.74  E-value=0.17  Score=43.89  Aligned_cols=44  Identities=23%  Similarity=0.184  Sum_probs=36.1

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH-HHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI-PICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~-~i~~~aG~~  298 (420)
                      +.+.|||.|+.+++..+.  .+ +++|++++|+|+.+. ..++..|++
T Consensus        21 ~~~~~~t~a~~~~~~~~~--~~-~~~v~~~~~~~~~~~~~~~~~~g~~   65 (170)
T cd01494          21 VFVPSGTGANEAALLALL--GP-GDEVIVDANGHGSRYWVAAELAGAK   65 (170)
T ss_pred             EEeCCcHHHHHHHHHHhC--CC-CCEEEEeecccceehhhHHHhcCCE
Confidence            457799999999987663  35 899999999999998 777777755

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=93.70  E-value=0.52  Score=48.02  Aligned_cols=98  Identities=11%  Similarity=0.170  Sum_probs=67.1

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLI   94 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv~~L~   94 (420)
                      +++.....++..+|.++    +|.   +.++++++..|..+.+.|++.+    |. .....|+|-+.-++  .+..+.|.
T Consensus       253 ~~s~~~q~~~~~~l~~~----~~~---~~~~~~~~~~r~~~~~~L~~~g----~~-~~p~~~~f~~~~~~~~~~~a~~l~  320 (369)
T PRK08153        253 GMNRIAQAAALAALKDQ----AYL---AEVVGKIAAARDRIAAIARANG----LT-PLPSATNFVAIDCGRDGAFARAVL  320 (369)
T ss_pred             CCCHHHHHHHHHHhcCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----Cc-cCCCcCcEEEEECCCCcccHHHHH
Confidence            45566778888888753    564   4567788888999999898654    33 23567888887653  12222333


Q ss_pred             H---hcceEEc-C---C--C--ceecccCCcCCHHHHHHHHHhhC
Q psy16707         95 K---EHSVYLT-K---D--G--RISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        95 ~---~~~IY~~-~---~--G--Rinvagl~~~ni~~va~ai~~v~  128 (420)
                      +   +++|++. +   .  +  ||+++  ++..++++.+++.++.
T Consensus       321 ~~l~~~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~  363 (369)
T PRK08153        321 DGLIARDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEAL  363 (369)
T ss_pred             HHHHHCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHH
Confidence            3   5799983 2   1  2  67777  7899999999998873

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=93.61  E-value=0.29  Score=50.03  Aligned_cols=79  Identities=15%  Similarity=0.221  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC-------HHHHHHHHHhCCeEEeCCC----cEEEc-ccCC
Q psy16707        339 DRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTKDG----RISMA-GVTS  405 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~-------~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~  405 (420)
                      ++.+++++.+.+.|+++ +.. .|.....+.|+|+++.++       .++++.|+ ++||++.|++    ||+.. ..++
T Consensus       302 ~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRi~~~~~~~~  379 (400)
T PTZ00125        302 ENAQRLGEVFRDGLKELLKKS-PWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPTHDNIIRFAPPLVITK  379 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCeEEEecccEEEEEEEccCcchHHHHHHHHHH-HCCeEEeecCCCEEEEECCccCCH
Confidence            44445555555556553 211 132223457888765332       24456665 7899999864    88863 3788


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      ++|+.+.++|.+++
T Consensus       380 ~~i~~~l~~l~~~l  393 (400)
T PTZ00125        380 EQLDQALEIIKKVL  393 (400)
T ss_pred             HHHHHHHHHHHHHH
Confidence            89999999988765

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=93.49  E-value=0.78  Score=45.90  Aligned_cols=95  Identities=17%  Similarity=0.292  Sum_probs=63.6

Q ss_pred             ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHH-HHHH
Q psy16707         18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQ-VEKL   93 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~q-v~~L   93 (420)
                      ++..+-.++...|.++    +|   ++.+++++...|..|.+.|++.+    |. +....|+|.+..+   +.++ ++.|
T Consensus       244 ~~~~~q~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~l  311 (353)
T PRK05387        244 LDRLAQAGAIAAIEDE----AY---FEETRAKVIATRERLVEELEALG----FE-VLPSKANFVFARHPSHDAAELAAKL  311 (353)
T ss_pred             cCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----Ce-ECCCcCcEEEEECCCCCHHHHHHHH
Confidence            4455666777777653    34   34578888999999999998763    43 2345677877765   3444 4455


Q ss_pred             HHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                       .+++|++..-      +  ||+++  ++..++++.++|.++
T Consensus       312 -~~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~  350 (353)
T PRK05387        312 -RERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEI  350 (353)
T ss_pred             -HHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHH
Confidence             5678988211      1  67776  567888888888765

>PRK07777 aminotransferase; Validated

Probab=93.44  E-value=0.78  Score=46.80  Aligned_cols=71  Identities=15%  Similarity=0.222  Sum_probs=48.5

Q ss_pred             HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------C-HHHHHHHHH
Q psy16707         23 ARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIK   95 (420)
Q Consensus        23 a~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~-~~qv~~L~~   95 (420)
                      ..++...|.++   ++|.   +.+++.++..|..|.+.|++.+    |..+..+-|||.++-+      + .+-++.|.+
T Consensus       270 q~~~~~~l~~~---~~~~---~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~  339 (387)
T PRK07777        270 QPAVAHALDHE---DAWV---AALRDSLQAKRDRLAAGLAEAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPE  339 (387)
T ss_pred             HHHHHHHHhCC---cHHH---HHHHHHHHHHHHHHHHHHHhCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHH
Confidence            44555666543   3564   4567788889999999998753    5555667788887543      3 344677778


Q ss_pred             hcceEEcC
Q psy16707         96 EHSVYLTK  103 (420)
Q Consensus        96 ~~~IY~~~  103 (420)
                      +++|++.+
T Consensus       340 ~~gv~v~p  347 (387)
T PRK07777        340 RVGVAAIP  347 (387)
T ss_pred             hCCEEEeC
Confidence            89998854

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=93.34  E-value=0.3  Score=51.46  Aligned_cols=83  Identities=20%  Similarity=0.384  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC----CCCceEEe--cCCCHHHHHHHHHhCCeEEeC------------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT----DQIGMFCY--TGLNATQVEKLIKEHSVYLTK------------  394 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~----~q~GmF~~--~~l~~~~v~~Ll~e~~Vy~~p------------  394 (420)
                      +.+.+++++.+.++.|.+.|++.|.    ..+.    .+.+...+  .+.+.+.+..+++++||++..            
T Consensus       300 ~~~~~~~~i~~l~~~l~~~L~~~g~----~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~  375 (452)
T PTZ00094        300 EWKEYAKQVLKNAKALAAALEKRGY----DLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNP  375 (452)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCc----EEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCC
Confidence            4556778899999999999988763    2221    12233222  245667777777899999952            


Q ss_pred             -CCcEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707        395 -DGRISMAGVT-----SKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 -~gRis~agl~-----~~ni~~la~AI~~vv  419 (420)
                       +.|++...+|     ++.+++++++|.+++
T Consensus       376 ~~vRis~~~~tt~g~~~~di~~l~~~l~~~~  406 (452)
T PTZ00094        376 SGVRLGTPALTTRGAKEKDFKFVADFLDRAV  406 (452)
T ss_pred             CeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence             2399986665     699999999999876

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=93.23  E-value=0.74  Score=49.32  Aligned_cols=96  Identities=14%  Similarity=0.274  Sum_probs=68.5

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-----
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----   87 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~-~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-----   87 (420)
                      .+++.+.....+++.+|+|++    |. +-+..++++++.-|+.+.+.|++.+    +..+.-+-|+|.+.-|.+     
T Consensus       307 ~~~~vs~~~Q~a~~~~L~d~~----~~~~~l~~~r~~l~~r~~~l~~~L~~~g----i~~~~~~aG~flwi~l~~~~~~~  378 (496)
T PLN02376        307 SFGLVSSQTQLMLASMLSDDQ----FVDNFLMESSRRLGIRHKVFTTGIKKAD----IACLTSNAGLFAWMDLRHLLRDR  378 (496)
T ss_pred             hcCCCCHHHHHHHHHHhCChh----HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCceEEEEEEchhhhccC
Confidence            455677778889999999864    53 3477888999999999999998753    556667889999998753     


Q ss_pred             -------HHHHHHHHhcceEEcCC--------C--ceecccCCcCCH
Q psy16707         88 -------TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNV  117 (420)
Q Consensus        88 -------~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni  117 (420)
                             +-++.|.++++|.+.+.        |  |||++......+
T Consensus       379 ~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l  425 (496)
T PLN02376        379 NSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTL  425 (496)
T ss_pred             CchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHH
Confidence                   12334566788988753        2  667666554333

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=92.94  E-value=0.91  Score=46.31  Aligned_cols=59  Identities=15%  Similarity=0.281  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------HHHHHHHHHhcceEEcC
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------ATQVEKLIKEHSVYLTK  103 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------~~qv~~L~~~~~IY~~~  103 (420)
                      +.++.++++++..|..+.+.|++.+    |.+...+-|||-+.-++       .+.++.|.++++|++.+
T Consensus       289 ~~l~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~p  354 (388)
T PRK07366        289 ATVQQTVQIFRQRRDAFINALHQIG----WPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASP  354 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeC
Confidence            4467788888999999999998762    66667789999888664       23456787889998875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=92.86  E-value=0.9  Score=45.71  Aligned_cols=98  Identities=14%  Similarity=0.106  Sum_probs=68.0

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLIK   95 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~~L~~   95 (420)
                      +.+..+..++..+|++.       +.++.++++++..|..+.+.|++.  ++ |. +....|+|.+..+ +.+++..+-+
T Consensus       247 ~~~~~~q~~a~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~  315 (356)
T PRK04870        247 NVNVLTQATALFALEHV-------DVLDAQAAQLRAERTRLAAALAAL--PG-VT-VFPSAANFILVRVPDAAAVFDGLK  315 (356)
T ss_pred             cCCHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHHHHHhC--CC-cE-ECCCCCeEEEEECCCHHHHHHHHH
Confidence            45556666677777652       235667788889999999999865  23 43 3456788887777 4566666667


Q ss_pred             hcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707         96 EHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        96 ~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +++|.+.+.          =||+++  +...++.+.+||.++
T Consensus       316 ~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~  355 (356)
T PRK04870        316 TRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAA  355 (356)
T ss_pred             HCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHh
Confidence            889998532          146666  568889999998765

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=92.82  E-value=0.57  Score=48.02  Aligned_cols=82  Identities=17%  Similarity=0.160  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CC--C-HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCC
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL--N-ATQVEKLIKEHSVYLTKDG----RISMA-GVTSK  406 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l--~-~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~  406 (420)
                      +.++++++++.+.+.|++++.+. .......+.||.+.  +-  + .++++.|+ +.||++.+.+    ||+.. ..+++
T Consensus       309 ~~~~~~~~~~~l~~~L~~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~~~~~~lR~~p~~~~t~e  386 (401)
T PRK00854        309 MIENAAEMGAYFLEGLRSIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALK-ERGLLAKDTHDHTIRLAPPLVITRE  386 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHH-HCCeEEecCCCCEEEEeCCcccCHH
Confidence            56788889999999998876321 11122233344431  21  2 34567775 5799998643    78863 57899


Q ss_pred             CHHHHHHHHHHHhC
Q psy16707        407 NVGYLAKAIHAVTK  420 (420)
Q Consensus       407 ni~~la~AI~~vv~  420 (420)
                      +|+++.++++++++
T Consensus       387 ~i~~~i~~l~~~l~  400 (401)
T PRK00854        387 QVDWALEQIAKVLA  400 (401)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998763

>PRK08912 hypothetical protein; Provisional

Probab=92.74  E-value=1.1  Score=45.78  Aligned_cols=79  Identities=19%  Similarity=0.318  Sum_probs=54.7

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------   86 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------   86 (420)
                      .|+.||...+.+++.+.++    .+|.   +.++++++..|+.+++.|+..+    |....-+.|+|.+.-++       
T Consensus       262 ~~~~~~~~q~~~~~~l~~~----~~~~---~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~g~~~l~~~l~~~~~~~~  330 (387)
T PRK08912        262 TFTTPPNLQAAVAYGLGKP----DDYF---EGMRADLARSRDRLAAGLRRIG----FPVLPSQGTYFLTVDLAPLGLAED  330 (387)
T ss_pred             cccCChHHHHHHHHHHhCC----HHHH---HHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEecccccCCCCC
Confidence            3777777767666666554    3343   4578888999999999998763    45555678888887654       


Q ss_pred             HHH-HHHHHHhcceEEcC
Q psy16707         87 ATQ-VEKLIKEHSVYLTK  103 (420)
Q Consensus        87 ~~q-v~~L~~~~~IY~~~  103 (420)
                      .++ ++.|.++++|++.+
T Consensus       331 ~~~~~~~l~~~~gV~v~p  348 (387)
T PRK08912        331 DVAFCRRLVEEAGVAAIP  348 (387)
T ss_pred             HHHHHHHHHhcCCEEEec
Confidence            333 45566788998875

>PRK05942 aspartate aminotransferase; Provisional

Probab=92.74  E-value=1.3  Score=45.44  Aligned_cols=108  Identities=18%  Similarity=0.202  Sum_probs=68.3

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++.+.+..-.+++.....++..+|.+      +.+-++.++++++..|..+.+.|++.+    |..+..+.|||.+.-+
T Consensus       264 ~l~~~~~~~~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~~~~  333 (394)
T PRK05942        264 GLRTLKTNLDYGIFSALQKAAETALQL------PDSYLQQVQERYRTRRDFLIQGLGELG----WNIPPTKATMYLWVPC  333 (394)
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHHhC------cHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeeEEEEEC
Confidence            344433332234455556677777753      233345677888888999999997653    4555667899887654


Q ss_pred             ----CHHH-HHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 ----NATQ-VEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ----~~~q-v~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                          +.++ ++.+-++++|.+.+.        +  ||+++    ...+.+.+++...
T Consensus       334 ~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~----~~~~~l~~~l~~l  386 (394)
T PRK05942        334 PVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI----ADCDRLGEALDRL  386 (394)
T ss_pred             CCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec----CCHHHHHHHHHHH
Confidence                3444 345667899998541        1  67764    3467888887765

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=92.68  E-value=0.96  Score=45.81  Aligned_cols=101  Identities=12%  Similarity=0.151  Sum_probs=62.7

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVE   91 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~   91 (420)
                      ..|+. +..+..++...|.+.   +.|.    +.++++...|..+.+.|++.+    +.....+-|+|.+.-+ +.+++.
T Consensus       255 ~~~~~-s~~~~~a~~~~l~~~---~~~~----~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~  322 (368)
T PRK03317        255 LPYHL-SAVTQAAARAALRHA---DELL----ASVAALRAERDRVVAWLRELG----LRVAPSDANFVLFGRFADRHAVW  322 (368)
T ss_pred             CCCCC-CHHHHHHHHHHhhCH---HHHH----HHHHHHHHHHHHHHHHHHHCC----CEeCCCCCcEEEEeccCCHHHHH
Confidence            34543 344566666777652   2333    334556777888888887753    4444556666666443 333333


Q ss_pred             HHHHhcceEEcCCC-----ceecccCCcCCHHHHHHHHHhh
Q psy16707         92 KLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        92 ~L~~~~~IY~~~~G-----Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ..-.+++|++...|     ||+++  ++..++.+.+++.++
T Consensus       323 ~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~  361 (368)
T PRK03317        323 QGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEV  361 (368)
T ss_pred             HHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence            33346799998654     66665  567889999999887

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=92.67  E-value=0.82  Score=46.70  Aligned_cols=83  Identities=17%  Similarity=0.328  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecC-----CCHHHHHHHHHhcceEEcC------------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTG-----LNATQVEKLIKEHSVYLTK------------  103 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~g-----L~~~qv~~L~~~~~IY~~~------------  103 (420)
                      +.++.+++++..|..|.+.|.+.+    |..+. .+.++|.+.-     .+.+++..+-++++|++..            
T Consensus       276 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~  351 (402)
T cd00378         276 EFKAYAKQVVENAKALAEALKERG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFV  351 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCC
Confidence            556677888999999999998764    43332 2346665443     3456676766888999942            


Q ss_pred             -CC-ceeccc-----CCcCCHHHHHHHHHhhC
Q psy16707        104 -DG-RISMAG-----VTSKNVGYLAKAIHANG  128 (420)
Q Consensus       104 -~G-Rinvag-----l~~~ni~~va~ai~~v~  128 (420)
                       ++ ||++.+     ++.++|++++++|.++.
T Consensus       352 ~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~  383 (402)
T cd00378         352 PSGIRIGTPAMTTRGMGEEEMEEIADFIARAL  383 (402)
T ss_pred             CCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence             11 776655     45899999999999873

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK06348 aspartate aminotransferase; Provisional

Probab=92.66  E-value=1.1  Score=45.71  Aligned_cols=89  Identities=16%  Similarity=0.197  Sum_probs=56.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--   83 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--   83 (420)
                      .++.+.+....++|..+..++...|.+.   +.|.   +.+++.++..|..+++.|+..  ++ +....-+.|||.++  
T Consensus       255 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~---~~~~~~~~~r~~~~~~~L~~~--~~-~~~~~p~gg~~~~~~~  325 (384)
T PRK06348        255 TAKIINEGICFSAPTISQRAAIYALKHR---DTIV---PLIKEEFQKRLEYAYKRIESI--PN-LSLHPPKGSIYAFINI  325 (384)
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHH---HHHHHHHHHHHHHHHHHHhcC--CC-ceeccCCeeEEEEEec
Confidence            4455555544455666677777777642   3444   445566666677788888754  22 44445678999874  


Q ss_pred             ---CCCHHHH-HHHHHhcceEEcC
Q psy16707         84 ---GLNATQV-EKLIKEHSVYLTK  103 (420)
Q Consensus        84 ---gL~~~qv-~~L~~~~~IY~~~  103 (420)
                         +++.++. +.|.++++|.+.+
T Consensus       326 ~~~~~~~~~l~~~l~~~~gv~v~p  349 (384)
T PRK06348        326 KKTGLSSVEFCEKLLKEAHVLVIP  349 (384)
T ss_pred             ccCCCCHHHHHHHHHHhCCEEEcC
Confidence               4556664 4567789998874

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=92.34  E-value=0.31  Score=48.43  Aligned_cols=65  Identities=23%  Similarity=0.179  Sum_probs=50.4

Q ss_pred             CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707        202 IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP  281 (420)
Q Consensus       202 ~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp  281 (420)
                      -....+|++++++++ |..       .+                      +.+.|||.|+..++..+. +.| ||+|++|
T Consensus        17 ~~~~~~~~~~la~~~-~~~-------~~----------------------~~~~sgt~al~~~l~~l~-~~~-gd~vl~~   64 (352)
T cd00616          17 GPKVREFEKAFAEYL-GVK-------YA----------------------VAVSSGTAALHLALRALG-IGP-GDEVIVP   64 (352)
T ss_pred             CHHHHHHHHHHHHHh-CCC-------eE----------------------EEECCHHHHHHHHHHHcC-CCC-CCEEEeC
Confidence            446889999999976 421       12                      557899999998886542 457 8999999


Q ss_pred             CCCCCCcHHHHhhcCcc
Q psy16707        282 TPTWGNHIPICKHTGLE  298 (420)
Q Consensus       282 dP~w~ny~~i~~~aG~~  298 (420)
                      +|+|..+...+...|++
T Consensus        65 ~~~~~~~~~~~~~~g~~   81 (352)
T cd00616          65 SFTFVATANAILLLGAT   81 (352)
T ss_pred             CcchHHHHHHHHHcCCe
Confidence            99999998888887775

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=92.34  E-value=0.45  Score=49.57  Aligned_cols=55  Identities=15%  Similarity=0.148  Sum_probs=38.5

Q ss_pred             CCCceEEecCC--------CHHHHHHHH---HhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHhC
Q psy16707        366 DQIGMFCYTGL--------NATQVEKLI---KEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       366 ~q~GmF~~~~l--------~~~~v~~Ll---~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv~  420 (420)
                      ...|+|+++-+        +.++...+.   .+.||.+.|++      ||+.+. +++++|+...+++.++++
T Consensus       347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~  419 (420)
T TIGR00700       347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA  419 (420)
T ss_pred             eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence            34588887533        123333343   68999999863      788764 688999999999988763

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=92.32  E-value=0.68  Score=48.40  Aligned_cols=85  Identities=12%  Similarity=0.113  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CC------CHHHHHHH---HHhCCeEEeCCC------c
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL------NATQVEKL---IKEHSVYLTKDG------R  397 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l------~~~~v~~L---l~e~~Vy~~p~g------R  397 (420)
                      +.+.++++++++.|.+.|+++....++-......|+|+.+  ..      +.+++..+   +.+.||++.|++      |
T Consensus       317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr  396 (421)
T PRK06777        317 EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIR  396 (421)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEE
Confidence            3566788888888888888764221232223455555532  11      12333333   457999999864      7


Q ss_pred             EEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        398 ISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~a-gl~~~ni~~la~AI~~vv  419 (420)
                      |... .+++++++...+++.+++
T Consensus       397 ~~ppl~i~~~~i~~~~~~l~~~l  419 (421)
T PRK06777        397 FLYPLTIPDAQFSKALNILTRLL  419 (421)
T ss_pred             EeCCCCCCHHHHHHHHHHHHHHH
Confidence            7764 378999999999998875

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=92.25  E-value=1.3  Score=45.43  Aligned_cols=98  Identities=13%  Similarity=0.217  Sum_probs=60.7

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC------HHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------ATQ   89 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~------~~q   89 (420)
                      .+++.-.-.++..+|.+..   .|.   ..++.+++..|..+.+.|++.+    +.....+.|+|.+..+.      ..+
T Consensus       268 ~~~~~~~q~~~~~~l~~~~---~~~---~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~~~~~~l~~~~~~~~~~  337 (391)
T PRK07309        268 TAATTMAQFAAVEALTNGK---DDA---LPMKKEYIKRRDYIIEKMTDLG----FKIIKPDGAFYIFAKIPAGYNQDSFK  337 (391)
T ss_pred             cCCChHHHHHHHHHHhCCh---hHH---HHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEECCCCCCCCHHH
Confidence            3455555666777787642   232   4567777888888999998753    55566677888775443      333


Q ss_pred             -HHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHH
Q psy16707         90 -VEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus        90 -v~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai  124 (420)
                       +++|.++++|.+.+..          ||+++. +...++...+.|
T Consensus       338 ~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l  382 (391)
T PRK07309        338 FLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRL  382 (391)
T ss_pred             HHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHH
Confidence             4466678899886432          677664 333444444443

>PRK09265 aminotransferase AlaT; Validated

Probab=92.13  E-value=1.5  Score=45.15  Aligned_cols=104  Identities=13%  Similarity=0.153  Sum_probs=64.4

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------   86 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------   86 (420)
                      ...+++..+-.++..+|.+.+-..+|.++    +.++...|..+.+.|+++  ++ |..+.-+-|||.+.-+.       
T Consensus       274 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~----~~~~~~~r~~~~~~L~~~--~~-~~~~~p~~g~~l~~~~~~~~~~~~  346 (404)
T PRK09265        274 MRLCANVPAQHAIQTALGGYQSINELILP----GGRLYEQRDRAWELLNAI--PG-VSCVKPKGALYAFPKLDPKVYPIH  346 (404)
T ss_pred             cccCCCcHHHHHHHHHhcCchhHHHHHHH----HHHHHHHHHHHHHHHhcC--CC-CcccCCCcceEEEEEecccccCCC
Confidence            34466777788888888764322223222    345666688888888764  23 66667788999996553       


Q ss_pred             --HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHH
Q psy16707         87 --ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIH  125 (420)
Q Consensus        87 --~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~  125 (420)
                        .+.+..+-++++|.+.+.        +  ||++ +.+...++...+.|.
T Consensus       347 ~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~-~~~~e~l~~~l~rl~  396 (404)
T PRK09265        347 DDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT-LPRVDDLEEAIGRIG  396 (404)
T ss_pred             CHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe-CCCHHHHHHHHHHHH
Confidence              345667778899988542        1  5777 344444444444443

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=92.13  E-value=1.5  Score=44.91  Aligned_cols=75  Identities=12%  Similarity=0.095  Sum_probs=48.5

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L   93 (420)
                      ++|......+...|.++       +.++..++++++.|..+.+.|++.     +....-+.|+|.+.-+.   .+-++.|
T Consensus       276 ~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l  343 (393)
T TIGR03538       276 AMPIPTQLASIAAWNDE-------QHVRENRALYREKFAAVLEILGQV-----LDLELPDAGFYLWPKVPGDDEAFARAL  343 (393)
T ss_pred             CcCHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHHHHHHHHhh-----CcccCCCeeEEEEEECCCCHHHHHHHH
Confidence            34444455555556542       235666777777888888888753     12245688999999875   3344467


Q ss_pred             HHhcceEEcC
Q psy16707         94 IKEHSVYLTK  103 (420)
Q Consensus        94 ~~~~~IY~~~  103 (420)
                      .++++|.+.+
T Consensus       344 ~~~~gV~v~p  353 (393)
T TIGR03538       344 YEEENVTVLP  353 (393)
T ss_pred             HHHCCEEEeC
Confidence            7789998853

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=92.10  E-value=1.4  Score=45.00  Aligned_cols=82  Identities=13%  Similarity=0.217  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-----ccccceeec--CCCHHHHHHHHHhcceEEcC------------
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCYT--GLNATQVEKLIKEHSVYLTK------------  103 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-----~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~------------  103 (420)
                      ++.+++|+..+++.|.+.|++..   .|..+.     .+.|++++.  +.+.+++..+-++++|++..            
T Consensus       293 ~~~~~~~~~~l~~~l~~~l~~~~---g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~  369 (403)
T TIGR01979       293 LENIEAHEHELTAYALERLGEIP---GLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRF  369 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHh
Confidence            67889999999999999997642   133332     236776654  66666666555788998853            


Q ss_pred             ----CCceecccC-CcCCHHHHHHHHHhh
Q psy16707        104 ----DGRISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       104 ----~GRinvagl-~~~ni~~va~ai~~v  127 (420)
                          .=||++.-. +.++|++++++|.++
T Consensus       370 ~~~~~iRiS~~~~~t~~di~~l~~~l~~~  398 (403)
T TIGR01979       370 GVPATCRASFYIYNTEEDIDALVEALKKV  398 (403)
T ss_pred             CCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence                236666544 457999999998765

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=92.08  E-value=1.4  Score=44.73  Aligned_cols=71  Identities=17%  Similarity=0.260  Sum_probs=49.3

Q ss_pred             HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHHHHHhc
Q psy16707         23 ARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEKLIKEH   97 (420)
Q Consensus        23 a~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~L~~~~   97 (420)
                      ..++...|.+.   ..|.   +.++++++..|..+.+.|++.+    |..+..+.|+|.+.-+    +.++ ++.|.+++
T Consensus       275 q~~~~~~l~~~---~~~~---~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~  344 (383)
T TIGR03540       275 QYAAIAALNGP---QDVV---KEIRKIYQRRRDLLLEALKKIG----IDVEKPKATFYVWVPVPEGYTSAEFAARLLEET  344 (383)
T ss_pred             HHHHHHHHhCC---HHHH---HHHHHHHHHHHHHHHHHHHhCC----CEecCCCcceEEEEECCCCCCHHHHHHHHHHHC
Confidence            44556667664   4565   4557888899999999998763    5555567788877654    3344 56677788


Q ss_pred             ceEEcC
Q psy16707         98 SVYLTK  103 (420)
Q Consensus        98 ~IY~~~  103 (420)
                      +|.+.+
T Consensus       345 gi~v~~  350 (383)
T TIGR03540       345 GVVVTP  350 (383)
T ss_pred             CEEEec
Confidence            998874

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=92.04  E-value=30  Score=40.59  Aligned_cols=77  Identities=17%  Similarity=0.183  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-CCCCceEEec-CCCHHHH-HHHHHhCCeEEeCC--C--cEEEcccC-C
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYT-GLNATQV-EKLIKEHSVYLTKD--G--RISMAGVT-S  405 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-~~q~GmF~~~-~l~~~~v-~~Ll~e~~Vy~~p~--g--Ris~agl~-~  405 (420)
                      ++.+++|+......+.+.|++.|.    +.. .+..+.|.+- + +++++ ++| .+.||.+...  +  |+|+.-.| .
T Consensus       380 l~~Ia~ri~~la~~l~~~L~~~G~----~~~~~~~f~~vt~~~~-~~~~v~~~L-~~~gI~l~~~~~~~lrvs~~e~~T~  453 (993)
T PLN02414        380 LKTIAQRVHGLAGVFAAGLKKLGF----QVQSLPFFDTVKVKCS-DADAIADAA-AKVGINLRVVDANTVTVSFDETTTL  453 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCC----ccCCCCCcCeEEEecC-CHHHHHHHH-HHCCCeeEEecCCeEEEEeeccCCH
Confidence            566678888888888999988773    322 2334566553 3 34555 555 7889888532  2  77777664 4


Q ss_pred             CCHHHHHHHHH
Q psy16707        406 KNVGYLAKAIH  416 (420)
Q Consensus       406 ~ni~~la~AI~  416 (420)
                      ++|+.|++++.
T Consensus       454 edId~L~~~l~  464 (993)
T PLN02414        454 EDVDKLFKVFA  464 (993)
T ss_pred             HHHHHHHHHHc
Confidence            56999999885

>PRK06290 aspartate aminotransferase; Provisional

Probab=92.01  E-value=1.1  Score=46.59  Aligned_cols=110  Identities=15%  Similarity=0.082  Sum_probs=69.4

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN   86 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~   86 (420)
                      +..+.....++++.-...++..+|.++    +|   ++.++++++..|..+++.|++.+    |....-+.|||.+..+.
T Consensus       273 l~~~~~~~~~~~~~~~q~aa~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~f~l~v~lp  341 (410)
T PRK06290        273 FATVKDNNDSGQFIAIQKAGIYALDHP----EI---TEKIREKYSRRLDKLVKILNEVG----FKAEMPGGTFYLYVKAP  341 (410)
T ss_pred             HHHHHhccccCCcHHHHHHHHHHhhCc----HH---HHHHHHHHHHHHHHHHHHHHhCC----CeecCCCeeeEEEEECC
Confidence            333333333444444456778888875    35   34567777788889999998763    55555688999886654


Q ss_pred             -----------H-HHHHHHHHhcceEEcC-C-----CceecccC--CcCCHHHHHHHHHhh
Q psy16707         87 -----------A-TQVEKLIKEHSVYLTK-D-----GRISMAGV--TSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 -----------~-~qv~~L~~~~~IY~~~-~-----GRinvagl--~~~ni~~va~ai~~v  127 (420)
                                 . +=+++|.++..|-..+ +     =||++++.  +....+.+.+|+.++
T Consensus       342 ~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~  402 (410)
T PRK06290        342 KGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRR  402 (410)
T ss_pred             CccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHH
Confidence                       2 3346777776655433 1     26777764  346677888877665

>PRK06207 aspartate aminotransferase; Provisional

Probab=91.97  E-value=1.4  Score=45.48  Aligned_cols=89  Identities=16%  Similarity=0.174  Sum_probs=57.4

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++.+......+++.....++..+|.++   ..|.++   ..++.++.|..+.+.|++.  + .+.....+-|||.+.-+
T Consensus       272 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~---~~~~~~~~r~~l~~~L~~~--~-~~~~~~p~gg~fl~~~l  342 (405)
T PRK06207        272 RMEKLQAIVSLRAAGYSQAVLRTWFSEP---DGWMKD---RIARHQAIRDDLLRVLRGV--E-GVFVRAPQAGSYLFPRL  342 (405)
T ss_pred             HHHHHHhHhccCCCHHHHHHHHHHHhCc---HHHHHH---HHHHHHHHHHHHHHHHhcC--C-CceecCCCeeEEEEEeC
Confidence            3444433334455556777888888753   234333   4455667788899888764  2 25656677899999887


Q ss_pred             CH------HHHHHHHHhcceEEcC
Q psy16707         86 NA------TQVEKLIKEHSVYLTK  103 (420)
Q Consensus        86 ~~------~qv~~L~~~~~IY~~~  103 (420)
                      ++      +=++.|.++++|.+.+
T Consensus       343 ~~~~~~~~~~~~~l~~~~gV~v~p  366 (405)
T PRK06207        343 PRLAVSLHDFVKILRLQAGVIVTP  366 (405)
T ss_pred             cccCCCHHHHHHHHHHhcCEEEeC
Confidence            53      2355677788998875

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=91.96  E-value=1.6  Score=45.10  Aligned_cols=83  Identities=12%  Similarity=0.184  Sum_probs=56.0

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A   87 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~   87 (420)
                      +..+.+++.....++..+|.+..  ..|   ++.+++.++.-|..+.+.|++.+    |....-+.|||-+.-+.    .
T Consensus       288 ~~~~~~~s~~~q~a~~~~l~~~~--~~~---~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~g~~f~wi~~~~~~~~  358 (409)
T PRK07590        288 STKFNGVSYIVQRAAEAVYSPEG--KAQ---IKELIDYYMENAKIIREGLESAG----FEVYGGVNAPYIWVKTPDGMSS  358 (409)
T ss_pred             hhcccCcCHHHHHHHHHHhcCCc--HHH---HHHHHHHHHHHHHHHHHHHHhcC----CceecCCcceEEEEECCCCCCH
Confidence            33455566677777778887542  234   55567788888999999998753    44333467888877653    3


Q ss_pred             HH-HHHHHHhcceEEcC
Q psy16707         88 TQ-VEKLIKEHSVYLTK  103 (420)
Q Consensus        88 ~q-v~~L~~~~~IY~~~  103 (420)
                      ++ ++.|.++++|.+.+
T Consensus       359 ~~~~~~l~~~~gv~v~p  375 (409)
T PRK07590        359 WDFFDKLLQEANVVGTP  375 (409)
T ss_pred             HHHHHHHHHHCCEEEeC
Confidence            43 55677888998864

>PRK06107 aspartate aminotransferase; Provisional

Probab=91.94  E-value=1.7  Score=44.72  Aligned_cols=90  Identities=13%  Similarity=0.077  Sum_probs=61.4

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++.+......+|+.....++..+|.+.   ..|   ++.++++++..|..+++.|++.  ++ +..+.-+.|||.++-+
T Consensus       262 ~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~---~~~~~~~~~~~~~~~~~~L~~~--~g-~~~~~p~gg~~~~~~~  332 (402)
T PRK06107        262 AINKLQSQSSSCPSSISQAAAAAALNGD---QSF---VTESVAVYKQRRDYALALLNAI--PG-LSCLVPDGAFYLYVNC  332 (402)
T ss_pred             HHHHHHHhcccCCChHHHHHHHHHhcCC---hHH---HHHHHHHHHHHHHHHHHHHhcC--CC-CcccCCCcceEEeeec
Confidence            3444444344567777888889899753   346   4566677888899999999764  22 5666678999988754


Q ss_pred             ---------------CHHH-HHHHHHhcceEEcCC
Q psy16707         86 ---------------NATQ-VEKLIKEHSVYLTKD  104 (420)
Q Consensus        86 ---------------~~~q-v~~L~~~~~IY~~~~  104 (420)
                                     +.+. ++.|-++++|-+.+.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg  367 (402)
T PRK06107        333 AGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG  367 (402)
T ss_pred             ccccccccccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence                           2233 567878889977654

>PRK05939 hypothetical protein; Provisional

Probab=91.84  E-value=0.61  Score=48.52  Aligned_cols=68  Identities=18%  Similarity=0.192  Sum_probs=48.5

Q ss_pred             CCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707        197 KEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP  273 (420)
Q Consensus       197 ~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p  273 (420)
                      +.|. -.|.|   .|.++++++.-+.+          .                    +.+.+|+.|+..++..+  +.|
T Consensus        39 ~~Y~-r~g~p~~~~lE~~la~leg~~~----------~--------------------v~~ssG~~Ai~~~l~al--l~~   85 (397)
T PRK05939         39 FTYA-RQGTPTTAALEAKITKMEGGVG----------T--------------------VCFATGMAAIAAVFLTL--LRA   85 (397)
T ss_pred             CCcC-CCCCHHHHHHHHHHHHHhCCCe----------E--------------------EEeCCHHHHHHHHHHHH--cCC
Confidence            4454 34888   88888888764432          1                    56788899998877544  457


Q ss_pred             CCCEEEEcCCCCCCcHHH---HhhcCcc
Q psy16707        274 GEKVIYVPTPTWGNHIPI---CKHTGLE  298 (420)
Q Consensus       274 ~gd~VlvpdP~w~ny~~i---~~~aG~~  298 (420)
                       ||.|+++++.|+++...   ++..|++
T Consensus        86 -Gd~Vv~~~~~y~~t~~~~~~l~~~G~~  112 (397)
T PRK05939         86 -GDHLVSSQFLFGNTNSLFGTLRGLGVE  112 (397)
T ss_pred             -CCEEEECCCccccHHHHHHHHHhcCCE
Confidence             99999999999987654   3445654

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=91.82  E-value=1.2  Score=44.95  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=65.3

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVE   91 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~   91 (420)
                      ..|+.+.. ...++...|.++.+     +.++..+++++..|+.|.+.|++.+.   +... .-.|.|-+..+ +.+++.
T Consensus       241 ~~~~~~~~-~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~-~~~g~f~~~~~~~~~~~~  310 (354)
T PRK04635        241 APYPVPLP-VSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALSMYGG---AKVL-EGNGNYVLAKFDDVDAVF  310 (354)
T ss_pred             CCCCCCHH-HHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHHhCCC---ceEC-CCCCcEEEEECCCHHHHH
Confidence            34544322 23445566655431     23566677788889999999987531   3322 33478887666 566666


Q ss_pred             HHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         92 KLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        92 ~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .+-++++|.+..-      |  ||+++  +..+++.+++++.+-
T Consensus       311 ~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~~  352 (354)
T PRK04635        311 KALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRNQ  352 (354)
T ss_pred             HHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence            6557889988421      2  77765  568899999988653

>PRK06836 aspartate aminotransferase; Provisional

Probab=91.79  E-value=1.4  Score=45.17  Aligned_cols=87  Identities=18%  Similarity=0.284  Sum_probs=58.5

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVE   91 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~   91 (420)
                      +.++|.....+++.++.++..           +.+++..|+.+.+.|++.|    |..+..+-|||.+.-+   +..++.
T Consensus       281 ~~~~~~~~q~~~~~~l~~~~~-----------~~~~~~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~  345 (394)
T PRK06836        281 FVNAPALMQRVVAKCLDATVD-----------VSIYKRNRDLLYDGLTELG----FECVKPQGAFYLFPKSPEEDDVAFC  345 (394)
T ss_pred             cccCCHHHHHHHHHHhCChHH-----------HHHHHHHHHHHHHHHHhCC----CEeecCCceEEEEEeCCCCCHHHHH
Confidence            346677788899999988532           2445666888888887653    6656667789988755   556665


Q ss_pred             HHHHhcceEEcCCC--------ceecccCCcCCH
Q psy16707         92 KLIKEHSVYLTKDG--------RISMAGVTSKNV  117 (420)
Q Consensus        92 ~L~~~~~IY~~~~G--------Rinvagl~~~ni  117 (420)
                      .+-++++|.+.+.+        ||+++ .++..+
T Consensus       346 ~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~  378 (394)
T PRK06836        346 EKAKKHNLLLVPGSGFGCPGYFRLSYC-VDTETI  378 (394)
T ss_pred             HHHHhCCEEEECchhcCCCCeEEEEec-CCHHHH
Confidence            55578899887652        56665 444443

>PRK07683 aminotransferase A; Validated

Probab=91.69  E-value=1.6  Score=44.67  Aligned_cols=87  Identities=11%  Similarity=0.063  Sum_probs=57.4

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-   85 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-   85 (420)
                      +.......+.+++.....++..+|.+..   .|   ++.++++++..|..+.+.|.+.+    +.....+-|+|.+.-+ 
T Consensus       255 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~---~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~  324 (387)
T PRK07683        255 ILKVHQYNVTCASSISQYAALEALTAGK---DD---AKMMRHQYKKRRDYVYNRLISMG----LDVEKPTGAFYLFPSIG  324 (387)
T ss_pred             HHHHHHhccCCCChHHHHHHHHHHhCCh---HH---HHHHHHHHHHHHHHHHHHHHHcC----CcccCCCeeEEEEEecc
Confidence            3333333444556667777888887643   23   56667888888999999997752    4444567888888643 


Q ss_pred             ----CHHHH-HHHHHhcceEEcC
Q psy16707         86 ----NATQV-EKLIKEHSVYLTK  103 (420)
Q Consensus        86 ----~~~qv-~~L~~~~~IY~~~  103 (420)
                          +.++. .+|-++++|++.+
T Consensus       325 ~~~~~~~~~~~~ll~~~gI~v~p  347 (387)
T PRK07683        325 HFTMSSFDFALDLVEEAGLAVVP  347 (387)
T ss_pred             cCCCCHHHHHHHHHHhCCEEEcC
Confidence                44443 4666788999865

>PRK08363 alanine aminotransferase; Validated

Probab=91.49  E-value=1.4  Score=45.11  Aligned_cols=77  Identities=12%  Similarity=0.188  Sum_probs=49.5

Q ss_pred             ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHHHH
Q psy16707         18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQV   90 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~~qv   90 (420)
                      ++.....++...|.+.   .+|   ++.++++++..|..+.+.|++.  ++ |.....+-|+|.+.-+       +.+.+
T Consensus       275 ~s~~~q~~~~~~l~~~---~~~---l~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~g~~~~~~~l~~~~~~~~~~~~  345 (398)
T PRK08363        275 PNTPAQFAAIAGLTGP---MDY---LEEYMKKLKERRDYIYKRLNEI--PG-ISTTKPQGAFYIFPRIEEGPWKDDKEFV  345 (398)
T ss_pred             CChHHHHHHHHHHhCC---hHH---HHHHHHHHHHHHHHHHHHHhcC--CC-CEecCCCeEEEEEEEeccCCCCCHHHHH
Confidence            3444555666667542   344   4455777888888899998764  33 6655567788887433       34556


Q ss_pred             HHHHHhcceEEcC
Q psy16707         91 EKLIKEHSVYLTK  103 (420)
Q Consensus        91 ~~L~~~~~IY~~~  103 (420)
                      ..+-++++|.+.+
T Consensus       346 ~~~l~~~gV~v~~  358 (398)
T PRK08363        346 LDVLHEAHVLFVH  358 (398)
T ss_pred             HHHHHhCCEEEeC
Confidence            6666788998854

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=91.40  E-value=0.49  Score=48.89  Aligned_cols=59  Identities=20%  Similarity=0.158  Sum_probs=44.4

Q ss_pred             CCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707        197 KEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG  274 (420)
Q Consensus       197 ~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~  274 (420)
                      +.|.  |..+..+|+++++++.-++..                              +.+.+|+.|+.+++..+  +.| 
T Consensus        53 ~~Y~r~~~p~~~~Le~~lA~~~g~~~~------------------------------i~~~sG~~Ai~~~l~al--l~~-   99 (388)
T PRK07811         53 YEYARTGNPTRTALEEQLAALEGGAYG------------------------------RAFSSGMAATDCLLRAV--LRP-   99 (388)
T ss_pred             CcccCCCCccHHHHHHHHHHHhCCCce------------------------------EEeCCHHHHHHHHHHHH--hCC-
Confidence            3455  557789999999997633321                              45678899999988655  457 


Q ss_pred             CCEEEEcCCCCCCc
Q psy16707        275 EKVIYVPTPTWGNH  288 (420)
Q Consensus       275 gd~VlvpdP~w~ny  288 (420)
                      ||.|++++|+|+..
T Consensus       100 Gd~Vl~~~~~y~~t  113 (388)
T PRK07811        100 GDHIVIPNDAYGGT  113 (388)
T ss_pred             CCEEEEcCCCchHH
Confidence            99999999999953

>PRK05367 glycine dehydrogenase; Provisional

Probab=91.39  E-value=32  Score=40.25  Aligned_cols=81  Identities=19%  Similarity=0.216  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEe-cCCCHHHHHHHHHhCCeEEeCC--C--cEEEccc-C
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCY-TGLNATQVEKLIKEHSVYLTKD--G--RISMAGV-T  404 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~-~~l~~~~v~~Ll~e~~Vy~~p~--g--Ris~agl-~  404 (420)
                      .-++.+++|+......+.+.|++.|.+    .... .-+.|.+ ++.+.+++.+-+.+.||.+..-  +  |||+.-. +
T Consensus       350 ~Gl~~Ia~~~~~la~~l~~~L~~~G~~----~~~~~~f~~~~~~~~~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t  425 (954)
T PRK05367        350 EGLKAIARRVHRLAAILAAGLRALGLE----VVHDSFFDTLTVEVGGDAAAVLARALAAGINLRRVDDDHVGISLDETTT  425 (954)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCcc----cCCCCCCCeEEEeCCCCHHHHHHHHHHCCceeccccCCEEEEEecccCC
Confidence            347777788888888889999887743    2211 1233333 2335566644447889988432  2  7777655 4


Q ss_pred             CCCHHHHHHHHH
Q psy16707        405 SKNVGYLAKAIH  416 (420)
Q Consensus       405 ~~ni~~la~AI~  416 (420)
                      .++|+.+++++.
T Consensus       426 ~~did~l~~~l~  437 (954)
T PRK05367        426 REDLAALLAVFG  437 (954)
T ss_pred             HHHHHHHHHHHc
Confidence            456999999885

>PRK08960 hypothetical protein; Provisional

Probab=91.38  E-value=2.1  Score=43.69  Aligned_cols=109  Identities=15%  Similarity=0.197  Sum_probs=68.1

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccccccceeecC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG   84 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~-i~~Q~GmFs~~g   84 (420)
                      .++.+......+++.....++...|.+.     |.+-++.++++++..|..|.+.|++.+    |.. ..-+-|||.+.-
T Consensus       255 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~----~~~~~~p~g~~f~~~~  325 (387)
T PRK08960        255 ELEKLAQNLYISASTPAQHAALACFEPE-----TLAILEARRAEFARRRDFLLPALRELG----FGIAVEPQGAFYLYAD  325 (387)
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHhhcC-----cHHHHHHHHHHHHHHHHHHHHHHHhcC----CcCCcCCCeeEEEEEe
Confidence            3444434344455556666666777542     345566778888999999999998753    332 235678998764


Q ss_pred             C-----CHHHH-HHHHHhcceEEcCC-----------CceecccCCcCCHHHHHHHHHhh
Q psy16707         85 L-----NATQV-EKLIKEHSVYLTKD-----------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L-----~~~qv-~~L~~~~~IY~~~~-----------GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +     +.+++ +.|.++++|++.+.           =||+++.    ..+.+.+|+..+
T Consensus       326 ~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~----~~~~l~~al~~l  381 (387)
T PRK08960        326 ISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ----SLPRLQEAVERI  381 (387)
T ss_pred             ccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC----CHHHHHHHHHHH
Confidence            4     34444 46778899998742           1455553    356777776554

>PRK07503 methionine gamma-lyase; Provisional

Probab=91.19  E-value=0.68  Score=48.16  Aligned_cols=44  Identities=20%  Similarity=0.270  Sum_probs=31.8

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~  298 (420)
                      +.+.+|+.|+.+++..+  +.| ||+|++++|+|+.....    ++..|++
T Consensus        84 i~~~sG~~Al~~~l~~l--l~~-Gd~Viv~~~~y~~t~~~~~~~~~~~G~~  131 (403)
T PRK07503         84 VALASGMGAITATLWTL--LRP-GDEVIVDQTLYGCTFAFLHHGLGEFGVT  131 (403)
T ss_pred             EEEcCHHHHHHHHHHHH--cCC-CCEEEEccCccchHHHHHHHHHhhCCEE
Confidence            55789999999887544  557 99999999999764433    3345654

>PLN00175 aminotransferase family protein; Provisional

Probab=91.18  E-value=1.8  Score=44.95  Aligned_cols=98  Identities=14%  Similarity=0.187  Sum_probs=62.8

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CH-HH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQ   89 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~~-~q   89 (420)
                      ++|.-.-.++...|.++   +.|   ++.++++++..|..+++.|++.+    +....-+-|||.++-+      +. +=
T Consensus       291 ~~s~~~Q~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~  360 (413)
T PLN00175        291 ATATPMQWAAVAALRAP---ESY---YEELKRDYSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHTPFGFENDIAF  360 (413)
T ss_pred             CCCHHHHHHHHHHHhCC---HHH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccccCCCCHHHH
Confidence            44444566667778765   345   55667788888999999998763    3444567788888643      23 44


Q ss_pred             HHHHHHhcceEEcCC---------C----ceecccCCcCCHHHHHHHHH
Q psy16707         90 VEKLIKEHSVYLTKD---------G----RISMAGVTSKNVGYLAKAIH  125 (420)
Q Consensus        90 v~~L~~~~~IY~~~~---------G----Rinvagl~~~ni~~va~ai~  125 (420)
                      ++.|.++++|.+.+.         |    ||+++. ++.+++...+.|.
T Consensus       361 ~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~  408 (413)
T PLN00175        361 CEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMK  408 (413)
T ss_pred             HHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHH
Confidence            567888899988642         1    677763 4445444444443

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=91.17  E-value=0.98  Score=44.76  Aligned_cols=81  Identities=17%  Similarity=0.209  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccc-eeec---CCCHHHH-HHHHHhcceEEcCC---------C--c
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM-FCYT---GLNATQV-EKLIKEHSVYLTKD---------G--R  106 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~Gm-Fs~~---gL~~~qv-~~L~~~~~IY~~~~---------G--R  106 (420)
                      .+.++++++.+++.|.+.|.+.+.    ..+....++ +++.   +.+.+++ +.|.++ +|.+...         +  |
T Consensus       252 ~~~~~~~~~~~~~~l~~~l~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iR  326 (349)
T cd06454         252 GPERRERLQENVRYLRRGLKELGF----PVGGSPSHIIPPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLR  326 (349)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCC----cccCCCCCcEEEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEE
Confidence            567789999999999999987643    222222233 3332   2333444 566555 8887531         2  6


Q ss_pred             eeccc-CCcCCHHHHHHHHHhhC
Q psy16707        107 ISMAG-VTSKNVGYLAKAIHANG  128 (420)
Q Consensus       107 invag-l~~~ni~~va~ai~~v~  128 (420)
                      |+++. .+..+|++++++|.++|
T Consensus       327 i~~~~~~~~~~i~~~~~~l~~~~  349 (349)
T cd06454         327 ISLSAAHTKEDIDRLLEALKEVG  349 (349)
T ss_pred             EEEeCCCCHHHHHHHHHHHHHhC
Confidence            78776 78899999999999886

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=91.12  E-value=2  Score=43.19  Aligned_cols=106  Identities=13%  Similarity=0.216  Sum_probs=64.0

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-----cccccceee--c
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-----TDQIGMFCY--T   83 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-----~~Q~GmFs~--~   83 (420)
                      |-..++||..+..-+...|      +.|.+ .++.+++|+..+.+.+.+.|++...   |.-+     .++.++.++  .
T Consensus       242 r~~~~t~~~~~~~a~~~al------~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~---~~~~~~~~~~~~~~~v~~~~~  312 (376)
T TIGR01977       242 RFESGTLNTPGIAGLNAGI------KFIEKIGIANIAKKECMLTEKLLNGLREINK---VKIYGPADPANRVGVVSFTVE  312 (376)
T ss_pred             hccCCCCCHHHHHHHHHHH------HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCCCccccCCeEEEEEC
Confidence            3345666665533333222      23333 2578899999999999999975431   2211     123456544  4


Q ss_pred             CCCHHHHH-HHHHhcceEEcCC----------------C--ceecccCC-cCCHHHHHHHHHh
Q psy16707         84 GLNATQVE-KLIKEHSVYLTKD----------------G--RISMAGVT-SKNVGYLAKAIHA  126 (420)
Q Consensus        84 gL~~~qv~-~L~~~~~IY~~~~----------------G--Rinvagl~-~~ni~~va~ai~~  126 (420)
                      +.+.+++. .|.++|+|++...                |  ||++.+.| ..+|++++++|.+
T Consensus       313 ~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       313 GIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             CCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            67766665 5767778887542                2  55555544 4788888888865

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK05967 cystathionine beta-lyase; Provisional

Probab=91.12  E-value=0.59  Score=48.81  Aligned_cols=44  Identities=18%  Similarity=0.223  Sum_probs=33.6

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                      +.+.+|++|+..++..+  +.| ||.|++++|.|+++...+    +..|.+
T Consensus        83 v~~sSG~aAi~~~l~al--l~~-GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~  130 (395)
T PRK05967         83 ILVPSGLAAVTVPFLGF--LSP-GDHALIVDSVYYPTRHFCDTMLKRLGVE  130 (395)
T ss_pred             EEECcHHHHHHHHHHHh--cCC-CCEEEEccCCcHHHHHHHHHHHHhcCeE
Confidence            56778999999877533  557 999999999999987544    445554

>PRK08361 aspartate aminotransferase; Provisional

Probab=91.08  E-value=1.9  Score=44.05  Aligned_cols=81  Identities=12%  Similarity=0.182  Sum_probs=56.4

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQV   90 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~qv   90 (420)
                      .++|.....++..+|.+++.   | +-++.++++++..|..+.+.|++..  + +....-+-|||.+.     +++.+++
T Consensus       268 ~~~~~~~q~~~~~~l~~~~~---~-~~~~~~~~~~~~~~~~~~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~l  340 (391)
T PRK08361        268 GNVASFVQIAGIEALRSKES---W-KAVEEMRKEYNERRKLVLKRLKEMP--H-IKVFEPKGAFYVFANIDETGMSSEDF  340 (391)
T ss_pred             cCCChHHHHHHHHHhcCCcc---c-HHHHHHHHHHHHHHHHHHHHHHhCC--C-CeecCCCEEEEEEEECCCCCCCHHHH
Confidence            45565666777778877543   2 3577888899999999999998752  2 45555677898875     3455555


Q ss_pred             H-HHHHhcceEEcC
Q psy16707         91 E-KLIKEHSVYLTK  103 (420)
Q Consensus        91 ~-~L~~~~~IY~~~  103 (420)
                      . .|.++++|.+.+
T Consensus       341 ~~~l~~~~gv~v~p  354 (391)
T PRK08361        341 AEWLLEKARVVVIP  354 (391)
T ss_pred             HHHHHHhCCEEEcC
Confidence            4 566778998854

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=90.98  E-value=0.74  Score=47.52  Aligned_cols=82  Identities=13%  Similarity=0.101  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCCC----cE--EEcc
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----RI--SMAG  402 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~g----Ri--s~ag  402 (420)
                      .+.++++++++.|.+.|++++....+-......|.+..+-+       ..++++.| .++||++.+.|    |+  +++ 
T Consensus       299 ~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~~lR~~p~~~-  376 (397)
T TIGR03246       299 ELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAA-AEEGVIALIAGPNVVRFAPSLV-  376 (397)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHH-HHCCeEEeecCCCEEEEeCCCC-
Confidence            45688888889999988887632221111234455553211       22444555 57899988643    67  444 


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                      .++++|+++.+++.+++
T Consensus       377 ~t~~~i~~~~~~l~~~l  393 (397)
T TIGR03246       377 ISDDDIDEGLARFERAI  393 (397)
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            68889999999888775

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK05367 glycine dehydrogenase; Provisional

Probab=90.93  E-value=13  Score=43.46  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee-cCCCHHHHHHHHHhcceEEcCC--C--ceecccCCc-C
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGLNATQVEKLIKEHSVYLTKD--G--RISMAGVTS-K  115 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~-~gL~~~qv~~L~~~~~IY~~~~--G--Rinvagl~~-~  115 (420)
                      -|+.+++|+..+-..|.+.|++.|..-.....   -+.|.+ ++-+.+++..--.+.+|.+...  +  ||++--.|+ .
T Consensus       351 Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~---f~~~~~~~~~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~  427 (954)
T PRK05367        351 GLKAIARRVHRLAAILAAGLRALGLEVVHDSF---FDTLTVEVGGDAAAVLARALAAGINLRRVDDDHVGISLDETTTRE  427 (954)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcccCCCCC---CCeEEEeCCCCHHHHHHHHHHCCceeccccCCEEEEEecccCCHH
Confidence            38889999999999999999765433211111   123332 2335666554336778887433  2  566666655 6


Q ss_pred             CHHHHHHHHH
Q psy16707        116 NVGYLAKAIH  125 (420)
Q Consensus       116 ni~~va~ai~  125 (420)
                      +||.+++++.
T Consensus       428 did~l~~~l~  437 (954)
T PRK05367        428 DLAALLAVFG  437 (954)
T ss_pred             HHHHHHHHHc
Confidence            7999999996

>PRK06767 methionine gamma-lyase; Provisional

Probab=90.82  E-value=0.7  Score=47.67  Aligned_cols=60  Identities=15%  Similarity=0.047  Sum_probs=42.9

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707        201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV  280 (420)
Q Consensus       201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv  280 (420)
                      |..-..+|.+.++++.-+++          .                    +.+.+|+.|+..+...+  +.| ||.|++
T Consensus        59 ~~pt~~~Le~~lA~l~G~~~----------a--------------------l~~~sG~~Ai~~~l~al--~~~-Gd~Vv~  105 (386)
T PRK06767         59 GNPTVKLFEERMAVLEGGEE----------A--------------------LAFGSGMAAISATLIGF--LKA-GDHIIC  105 (386)
T ss_pred             CCcchHHHHHHHHHHhCCCc----------E--------------------EEECCHHHHHHHHHHHH--hCC-CCEEEE
Confidence            44446789999998763221          1                    56788999888776433  457 999999


Q ss_pred             cCCCCCCcHHHHh
Q psy16707        281 PTPTWGNHIPICK  293 (420)
Q Consensus       281 pdP~w~ny~~i~~  293 (420)
                      ++|.|+.....+.
T Consensus       106 ~~~~y~~~~~~~~  118 (386)
T PRK06767        106 SNGLYGCTYGFLE  118 (386)
T ss_pred             cCCcHHHHHHHHH
Confidence            9999987766554

>PRK07049 methionine gamma-lyase; Validated

Probab=90.81  E-value=0.68  Score=48.63  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=34.4

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                      +.+.||+.|+..+...+  +.| ||.|++++|+|+.|...+    +..|++
T Consensus       102 iv~~sG~~Ai~~~l~al--~~~-Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~  149 (427)
T PRK07049        102 ALFSSGMSAIATTLLAF--VRP-GDVILHSQPLYGGTETLLAKTFRNFGVG  149 (427)
T ss_pred             EEEccHHHHHHHHHHHH--hCC-CCEEEEcCCCcccHHHHHHHHHHhcCcE
Confidence            67999999988777543  457 999999999999997764    345654

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=90.80  E-value=1  Score=45.79  Aligned_cols=104  Identities=9%  Similarity=0.095  Sum_probs=67.9

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEK   92 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv~~   92 (420)
                      |+.+|. ++.++..+|..-+    +.+-++.++++.+..|+.|.+.+.+.+   .+.++.. .|+|..+-|  +.+++..
T Consensus       264 ~~~~~~-~~~aa~a~l~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~-~g~~~~~~~~~~~~~~~~  334 (375)
T PRK04260        264 FGGNKL-SMAAASATLDIML----TAGFLEQALENGNYLQEQLQKALQDKE---TVTTVRG-LGYMIGIETTADLSQLVE  334 (375)
T ss_pred             CCcCHH-HHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhhCC---CeeEEec-cceEEEEEecCcHHHHHH
Confidence            443444 4666666664322    123345777778888888888776542   2333333 677776654  3555554


Q ss_pred             HHHhcceEEcCCC----ceec-ccCCcCCHHHHHHHHHhh
Q psy16707         93 LIKEHSVYLTKDG----RISM-AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        93 L~~~~~IY~~~~G----Rinv-agl~~~ni~~va~ai~~v  127 (420)
                      --.+++|++.+.|    ||+. +.+++++|+.+.+.|.++
T Consensus       335 ~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        335 AARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             HHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence            4457899998766    7787 889999999999988764

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=90.65  E-value=0.68  Score=47.83  Aligned_cols=62  Identities=10%  Similarity=0.033  Sum_probs=46.3

Q ss_pred             CCCCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc
Q psy16707        195 LDKEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF  271 (420)
Q Consensus       195 ~~~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~  271 (420)
                      ....|+- .|.|   .|.++++++.-+++        +                      +.+.||++|+..++..+  +
T Consensus        40 ~~~~Y~r-~gnPt~~~lE~~lA~l~g~~~--------~----------------------~~~~sG~~Ai~~al~al--l   86 (377)
T TIGR01324        40 GELTYGR-RGTLTHFALQDAMCELEGGAG--------C----------------------YLYPSGLAAVTNSILAF--V   86 (377)
T ss_pred             CCCcccC-CCCccHHHHHHHHHHHhCCCc--------E----------------------EEECcHHHHHHHHHHHh--c
Confidence            3467874 7885   88888888653321        2                      56899999999887644  5


Q ss_pred             CCCCCEEEEcCCCCCCcHH
Q psy16707        272 FPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       272 ~p~gd~VlvpdP~w~ny~~  290 (420)
                      .| ||.|++++|.|+....
T Consensus        87 ~~-GD~Vl~~~~~y~~t~~  104 (377)
T TIGR01324        87 KA-GDHVLMVDSAYEPTRY  104 (377)
T ss_pred             CC-CCEEEEcCCCcHHHHH
Confidence            57 9999999999987654

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=90.52  E-value=0.83  Score=47.25  Aligned_cols=89  Identities=17%  Similarity=0.253  Sum_probs=54.7

Q ss_pred             CCchHHHHHHHHHHHccCCCCCCCCCC--CCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707        177 PYVLPSVKQADEIVLNKNLDKEYAPII--GAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG  254 (420)
Q Consensus       177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~--G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt  254 (420)
                      .+.++.+.++......+.....|....  -..+|++.++++. |.+       .+                      +.|
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~-g~~-------~~----------------------v~~   82 (390)
T PRK08133         33 SFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALE-GAE-------AC----------------------VAT   82 (390)
T ss_pred             CcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHh-CCC-------cE----------------------EEE
Confidence            345566666655543221223354322  2457788888765 422       12                      568


Q ss_pred             ccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707        255 ISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       255 ~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~  298 (420)
                      .||+.|+..++..+  +.| ||.|++++|.|+.....    ++..|++
T Consensus        83 ssG~~Ai~~al~al--~~~-Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~  127 (390)
T PRK08133         83 ASGMAAILAVVMAL--LQA-GDHVVSSRSLFGSTVSLFEKIFARFGIE  127 (390)
T ss_pred             CCHHHHHHHHHHHH--hCC-CCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence            99999999877544  457 99999999999775543    3445654

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=90.46  E-value=2.3  Score=42.43  Aligned_cols=90  Identities=17%  Similarity=0.212  Sum_probs=59.0

Q ss_pred             HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHHHHHHHhcce
Q psy16707         22 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSV   99 (420)
Q Consensus        22 Ga~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv~~L~~~~~I   99 (420)
                      +...+..+|.+.+    |   ++.++++++..|..|.+.|++.  + .|. +....|+|-...+.  .+++...-.+++|
T Consensus       245 ~~~~~~~~l~~~~----~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~-~~~~~g~~~~~~~~~~~~~~~~~L~~~gI  313 (346)
T TIGR01141       245 AQAAAIAALRDDD----F---IEKTVEEINAERERLYDGLKKL--P-GLE-VYPSDANFVLIRFPRDADALFEALLEKGI  313 (346)
T ss_pred             HHHHHHHHhCCHH----H---HHHHHHHHHHHHHHHHHHHHhc--C-CCE-ECCCcCCEEEEecCCCHHHHHHHHHHCCe
Confidence            4444566777643    4   5668889999999999999875  2 254 44456777666553  4555443356799


Q ss_pred             EEcCC-------C--ceecccCCcCCHHHHHHHH
Q psy16707        100 YLTKD-------G--RISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus       100 Y~~~~-------G--Rinvagl~~~ni~~va~ai  124 (420)
                      ++.+.       |  ||+++  ++.++++++++|
T Consensus       314 ~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l  345 (346)
T TIGR01141       314 IVRDLNSYPGLPNCLRITVG--TREENDRFLAAL  345 (346)
T ss_pred             EEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence            98642       2  45554  667888888776

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=90.46  E-value=1.4  Score=45.26  Aligned_cols=80  Identities=16%  Similarity=0.133  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--cCCC------HHHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLN------ATQVEKLIKEHSVYLTKDG----RISMA-GV  403 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~~l~------~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl  403 (420)
                      +.++.+++.+.|.+.|++++.+  +-......|.|..  ++.+      .++++.| .+.||++.|.+    ||+.. .+
T Consensus       308 l~~~~~~~~~~~~~~L~~l~~~--~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l-~~~Gv~v~~~~~~~lRi~p~l~~  384 (401)
T TIGR01885       308 LAENAEKLGEIFRDQLKKLPKP--IITEVRGRGLLNAIVIDESKTGRTAWDLCLKL-KEKGLLAKPTHGNIIRLAPPLVI  384 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhccCC--ceeEEeecCeeEEEEeccCcchhHHHHHHHHH-HhCCEEEEecCCCEEEEeCCccC
Confidence            3367777788999999988632  2111233455543  3332      2345666 57899998864    77753 57


Q ss_pred             CCCCHHHHHHHHHHHh
Q psy16707        404 TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv  419 (420)
                      ++++|+++.+++.+++
T Consensus       385 t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       385 TEEQLDEGLEIIKKVI  400 (401)
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            8899999999998875

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=90.46  E-value=2.3  Score=43.81  Aligned_cols=82  Identities=17%  Similarity=0.123  Sum_probs=54.5

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--------
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------   86 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--------   86 (420)
                      +.+|+.....++...|.+.     +..-++.++++++..|..|.+.|+..  ++ |.....+-|+|.+.-++        
T Consensus       277 ~~~~~~~~q~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~~~~~~~~  348 (403)
T TIGR01265       277 ILGPATIVQGALPDILENT-----PQEFFDGKISVLKSNAELCYEELKDI--PG-LVCPKPEGAMYLMVKLELELFPEIK  348 (403)
T ss_pred             hcCCChHHHHHHHHHHHhC-----hHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCceeEEEEeccccccCCCC
Confidence            4566666677777777641     23344556667777788999999764  22 44445678999988663        


Q ss_pred             -HHHH-HHHHHhcceEEcCC
Q psy16707         87 -ATQV-EKLIKEHSVYLTKD  104 (420)
Q Consensus        87 -~~qv-~~L~~~~~IY~~~~  104 (420)
                       ..++ +.|.++++|.+.+.
T Consensus       349 ~~~~~~~~l~~~~gv~v~pg  368 (403)
T TIGR01265       349 DDVDFCEKLVREESVICLPG  368 (403)
T ss_pred             CHHHHHHHHHHhCCEEEeCc
Confidence             3344 66667889988754

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=90.42  E-value=2.9  Score=42.07  Aligned_cols=94  Identities=16%  Similarity=0.148  Sum_probs=62.2

Q ss_pred             cchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHHH-HHHH
Q psy16707         19 PIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQ-VEKL   93 (420)
Q Consensus        19 P~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~q-v~~L   93 (420)
                      +..+..++..+|++.    .|.   +.+++.++..|+.|.+.|++.+    |... ...|+|....+    +.++ ++.|
T Consensus       257 ~~~~~~~a~~~l~~~----~~~---~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~g~~~~i~~~~~~~~~~~~~~L  324 (367)
T PRK02731        257 NSLALAAAVAALDDD----AFV---EKSRALNAEGMAWLTEFLAELG----LEYI-PSVGNFILVDFDDGKDAAEAYQAL  324 (367)
T ss_pred             CHHHHHHHHHHhCCH----HHH---HHHHHHHHHHHHHHHHHHHHCC----CccC-CCCceEEEEECCCCCCHHHHHHHH
Confidence            345566777788763    453   4456666777888888888763    3333 34577877665    4444 4455


Q ss_pred             HHhcceEEcCC--------CceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTKD--------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~~--------GRinvagl~~~ni~~va~ai~~v  127 (420)
                       .+++|++...        =||++.  +...++.+++++.++
T Consensus       325 -~~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~  363 (367)
T PRK02731        325 -LKRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEF  363 (367)
T ss_pred             -HHCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence             4689998753        267775  678899999998876

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=90.23  E-value=2.7  Score=43.78  Aligned_cols=93  Identities=17%  Similarity=0.226  Sum_probs=74.0

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~   83 (420)
                      ..++.+.....++||..+=..+...|++++- .   .+++.|+++.++-|..|++.|.+.+.   |.... -+-+||.|.
T Consensus       257 ~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~---~~~~~~~~~~~~rrd~l~~~l~~~~g---~~~~~~p~Ga~Y~~~  329 (393)
T COG0436         257 AALRKLKSYLTSCAPTPAQYAAIAALNGPQS-D---EVVEEMREEYRERRDLLVEALNEIGG---LSVVKPPEGAFYLFP  329 (393)
T ss_pred             HHHHHHHHhcccCCCHHHHHHHHHHhcCccc-h---HHHHHHHHHHHHHHHHHHHHHHhcCC---eeeccCCCeeEEEEe
Confidence            3455667778889999999999999998754 3   45666778999999999999987553   77777 678888888


Q ss_pred             CCC-----HHHHHHHHHhcceEEcCC
Q psy16707         84 GLN-----ATQVEKLIKEHSVYLTKD  104 (420)
Q Consensus        84 gL~-----~~qv~~L~~~~~IY~~~~  104 (420)
                      .++     .+=++.|-++++|-+++.
T Consensus       330 ~i~~~~d~~~f~~~Ll~~~gV~v~PG  355 (393)
T COG0436         330 KIPELLDSEEFAKKLLEEAGVAVVPG  355 (393)
T ss_pred             ecCCCCCHHHHHHHHHHhCCEEEecc
Confidence            776     467889999999998763

>PRK07337 aminotransferase; Validated

Probab=90.22  E-value=2.8  Score=42.74  Aligned_cols=108  Identities=12%  Similarity=0.168  Sum_probs=66.2

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN   86 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~   86 (420)
                      +..+....+.+++..+...+...|.+..+     +.++.+++.++..|+.+.+.|++.+.  .. .+.-+-|||-+.-+.
T Consensus       254 l~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~r~~~~~~L~~~~~--~~-~~~p~~g~f~~~~~~  325 (388)
T PRK07337        254 FEKLAQNLFICASALAQHAALACFEPDTL-----AIYERRRAEFKRRRDFIVPALESLGF--KV-PVMPDGAFYVYADCR  325 (388)
T ss_pred             HHHHHHHhccCCChHHHHHHHHHhccCch-----HHHHHHHHHHHHHHHHHHHHHHhcCC--cc-ccCCCeeEEEEEecc
Confidence            33444444445566666666677764332     23455688888889999999987532  11 134577999998653


Q ss_pred             ---------HHH-HHHHHHhcceEEcCC---------C--ceecccCCcCCHHHHHHHHHh
Q psy16707         87 ---------ATQ-VEKLIKEHSVYLTKD---------G--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        87 ---------~~q-v~~L~~~~~IY~~~~---------G--Rinvagl~~~ni~~va~ai~~  126 (420)
                               .++ ++.|-++++|.+.+.         |  ||+++. +   -+.+.++|..
T Consensus       326 ~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~---~~~l~~~l~r  382 (388)
T PRK07337        326 GVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-S---MSRLEEAVAR  382 (388)
T ss_pred             cccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-C---HHHHHHHHHH
Confidence                     445 456778889988532         1  667664 2   4555555544

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=90.22  E-value=0.4  Score=49.78  Aligned_cols=45  Identities=24%  Similarity=0.234  Sum_probs=41.3

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.+||.||++++..|. +.| ||+|++|.=+|....+.+-..|++
T Consensus        53 va~~sgT~AL~laL~al~-ig~-GDeVI~ps~TfvATan~i~~~Ga~   97 (374)
T COG0399          53 VAVSSGTAALHLALLALA-IGP-GDEVIVPSFTFVATANAVLLVGAK   97 (374)
T ss_pred             EEecChHHHHHHHHHhcC-CCC-CCEEEecCCchHHHHHHHHHcCCe
Confidence            679999999999998776 778 999999999999999999999997

>TIGR01814 kynureninase kynureninase

Probab=90.06  E-value=2.6  Score=43.41  Aligned_cols=108  Identities=15%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-CCCCCcccCC-----CCceEEe-cCC
Q psy16707        305 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-G-SNKPWNHITD-----QIGMFCY-TGL  376 (420)
Q Consensus       305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g-~~~~w~~i~~-----q~GmF~~-~~l  376 (420)
                      ..++|+..+...+...|     +-.-...++..+++....++.+.+.|++. | .+ .+..+.+     ..|++++ .+.
T Consensus       283 ~~GT~~~~~~~~l~~al-----~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~-~~~i~~~~~~~~r~~~v~~~~~~  356 (406)
T TIGR01814       283 RISNPPILSVAALRGSL-----DIFDQAGMEALRKKSLLLTDYLEELIKARCGGPP-VLTIITPRDHAQRGCQLSLTHPV  356 (406)
T ss_pred             eeCCccHHHHHHHHHHH-----HHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC-ceEEeCCCChhhcCCeEEEEecC
Confidence            34566665544443323     11111234666788888888888888764 2 11 1221211     2456554 233


Q ss_pred             CHHHH-HHHHHhCCeEEeCC--C--cEEEc--ccCCCCHHHHHHHHHHHh
Q psy16707        377 NATQV-EKLIKEHSVYLTKD--G--RISMA--GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       377 ~~~~v-~~Ll~e~~Vy~~p~--g--Ris~a--gl~~~ni~~la~AI~~vv  419 (420)
                      +.+.+ +.| .++||++...  +  |||++  ..+.+.|++++++|++++
T Consensus       357 ~~~~~~~~L-~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       357 PGKAVFQAL-IKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             CHHHHHHHH-HHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence            45555 555 6789998753  2  99984  458899999999998865

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK12414 putative aminotransferase; Provisional

Probab=89.88  E-value=4.1  Score=41.60  Aligned_cols=98  Identities=17%  Similarity=0.220  Sum_probs=64.1

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NAT   88 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~~   88 (420)
                      .+++.....++..+|.+++   .|.    .+++.++..|..+++.|++.+    |....-+-|||-+.-+       +.+
T Consensus       266 ~~~s~~~q~a~~~~l~~~~---~~~----~~~~~~~~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~  334 (384)
T PRK12414        266 FSADTPMQHAFAEALAEPA---SYL----GLGAFYQRKRDLLARELAGSR----FELLPSEGSFFMLARFRHFSDESDSD  334 (384)
T ss_pred             cCCCcHHHHHHHHHhcCCh---HHH----HHHHHHHHHHHHHHHHHHhCC----CeecCCCcceEEEEcccccCCCCHHH
Confidence            3455566777888888764   232    356777888999999998753    5555567788887532       456


Q ss_pred             HHHHHHHhcceEEcCCC------------ceecccCCcCCHHHHHHHHHhhC
Q psy16707         89 QVEKLIKEHSVYLTKDG------------RISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        89 qv~~L~~~~~IY~~~~G------------Rinvagl~~~ni~~va~ai~~v~  128 (420)
                      .+..+-++++|.+.+..            ||+++.    .-+.+.+++...+
T Consensus       335 ~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~----~~~~~~~~~~rl~  382 (384)
T PRK12414        335 FVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK----DDATLVEGARRLC  382 (384)
T ss_pred             HHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC----CHHHHHHHHHHHh
Confidence            67677788999887632            344442    2566666665543

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=89.79  E-value=1.3  Score=46.59  Aligned_cols=34  Identities=18%  Similarity=0.217  Sum_probs=28.5

Q ss_pred             HhCCeEEeCCC------cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        386 KEHSVYLTKDG------RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       386 ~e~~Vy~~p~g------Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                      .++||.+.|++      ||+++. ++++.|+...++|.+++
T Consensus       401 ~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l  441 (451)
T PRK06918        401 NKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESL  441 (451)
T ss_pred             HHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence            68999999853      888865 88999999999988875

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=89.71  E-value=6.9  Score=39.28  Aligned_cols=93  Identities=27%  Similarity=0.450  Sum_probs=58.5

Q ss_pred             chHHHHHHHHHhCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CC--CCcc-----------cCC
Q psy16707        310 PIHGARIVQEILGDPKLK---AQWLTEVKGMADRIISMRQSLKDNLQKEGS-------NK--PWNH-----------ITD  366 (420)
Q Consensus       310 p~~ga~iv~~IL~dp~L~---~~w~~el~~m~~r~~~~R~~l~~~L~~~g~-------~~--~w~~-----------i~~  366 (420)
                      ...|+-|+..+-+=|...   ..|.+|++.       .| -|.++|+++|.       |.  ++-+           -.+
T Consensus       258 T~rGapivTlmASfP~V~eRVkrWdeEv~k-------aR-~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~  329 (382)
T COG1103         258 TVRGAPIVTLMASFPHVVERVKRWDEEVEK-------AR-WFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHK  329 (382)
T ss_pred             cccCchHHHHHhcCHHHHHHHHHHHHHHHH-------HH-HHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCc
Confidence            577888887766666554   367777763       22 24555665541       11  0000           012


Q ss_pred             CCceEEecCCCHHHHHHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        367 QIGMFCYTGLNATQVEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       367 q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      ..|+|.|        +.| ++.||.-..-|     .+|+-|++.+.++|+++|+++++
T Consensus       330 r~gyFlY--------~EL-K~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~  378 (382)
T COG1103         330 RKGYFLY--------EEL-KKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIA  378 (382)
T ss_pred             CCceeeH--------HHH-HhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHH
Confidence            3344444        234 67788766544     89999999999999999999875

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=89.64  E-value=2.9  Score=43.03  Aligned_cols=81  Identities=11%  Similarity=0.098  Sum_probs=51.8

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-H
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-T   88 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~   88 (420)
                      .+.+++.-.-.++..+|.+...  .|.   +.+++.++..|+.+.+.|++.+    +....-..|+|.+.-+.    . +
T Consensus       283 ~~~~~s~~~q~~~~~~l~~~~~--~~~---~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~v~l~~~~~~~~  353 (402)
T TIGR03542       283 KFNGASYPVQRAAEAAYAGEGL--QPI---LEAISYYMENARILRKALEAAG----FKVYGGEHAPYLWVKTPEGISSWD  353 (402)
T ss_pred             cccCCCHHHHHHHHHHHcCcch--hHH---HHHHHHHHHHHHHHHHHHHhcC----ceecCCCceeEEEEECCCCCCHHH
Confidence            3444544455566778877554  243   3345667777888888887753    44333356888888764    3 4


Q ss_pred             HHHHHHHhcceEEcC
Q psy16707         89 QVEKLIKEHSVYLTK  103 (420)
Q Consensus        89 qv~~L~~~~~IY~~~  103 (420)
                      -.+.|.++++|.+.+
T Consensus       354 l~~~l~~~~gv~v~p  368 (402)
T TIGR03542       354 FFDFLLYQYHVVGTP  368 (402)
T ss_pred             HHHHHHHhCCEEEeC
Confidence            466777888998865

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=89.55  E-value=2.6  Score=43.22  Aligned_cols=99  Identities=16%  Similarity=0.262  Sum_probs=65.2

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----HHH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQ   89 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~~q   89 (420)
                      .|+ ++.-+-.++...|.++    +|   ++.++.+++..|..|.+.|++++    |-.+..+.|+|.+.-++    .++
T Consensus       268 ~~~-~~~~~q~aa~~aL~~~----~~---~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~~~f~~~~~~~~~~~~~  335 (380)
T PLN03026        268 PYN-VSVAAEVAACAALSNP----KY---LEDVKNALVEERERLFGLLKEVP----FLEPYPSDANFILCRVTSGRDAKK  335 (380)
T ss_pred             CCC-CCHHHHHHHHHHhhCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----CCeECCCCCeEEEEECCCCCCHHH
Confidence            344 4444556667778763    45   44567788888999999998763    22235577888877554    344


Q ss_pred             H-HHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         90 V-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v-~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      + +.|. +++|.+..-      |  ||+++  ++..++++.+|+..+
T Consensus       336 ~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~  379 (380)
T PLN03026        336 LKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL  379 (380)
T ss_pred             HHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence            4 4555 789988532      2  67766  566789999998753

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=89.54  E-value=2.4  Score=42.80  Aligned_cols=100  Identities=10%  Similarity=0.042  Sum_probs=67.7

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HH-HH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--AT-QV   90 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~-qv   90 (420)
                      ...+++..+..++..+|+++    .|   ++.++++++..|+.+.+.|++..  + |.. ....|+|-++-+.  .+ =+
T Consensus       240 ~~~~~~~~~~~~a~~~l~~~----~~---~~~~~~~~~~~r~~l~~~L~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~  308 (356)
T PRK08056        240 MPWSINAFAALAGEVILQDR----AY---QQATWQWLAEEGARFYQALCALP--L-LTV-WPGRANYLFLRCERPDIDLQ  308 (356)
T ss_pred             CCCchhHHHHHHHHHHhCCH----HH---HHHHHHHHHHHHHHHHHHHhcCC--C-cEE-cCCCCcEEEEEcCCChHHHH
Confidence            33455667888888888763    45   36777888888999999997652  2 443 3456888887653  23 34


Q ss_pred             HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         91 EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        91 ~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.|. +++|.+.+        .|  ||+++  ++.+.+++.+++.++
T Consensus       309 ~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~  352 (356)
T PRK08056        309 RALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNV  352 (356)
T ss_pred             HHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHH
Confidence            4555 67987632        12  66655  458889999999876

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=89.43  E-value=2.4  Score=43.70  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccce-eecCCC--HHHH-HHHHHhcceEEcCC---------C--ceec
Q psy16707         45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF-CYTGLN--ATQV-EKLIKEHSVYLTKD---------G--RISM  109 (420)
Q Consensus        45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmF-s~~gL~--~~qv-~~L~~~~~IY~~~~---------G--Rinv  109 (420)
                      .+++++...|..|.+.|++.|    |..+..+.+++ ..+|..  ..++ ++|.++++|++...         +  ||++
T Consensus       300 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~  375 (410)
T PRK13392        300 TERDAHQDRVAALKAKLNANG----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITP  375 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEE
Confidence            345677777888888887754    33333444554 234532  2334 45777889998642         2  5555


Q ss_pred             c-cCCcCCHHHHHHHHHhhC
Q psy16707        110 A-GVTSKNVGYLAKAIHANG  128 (420)
Q Consensus       110 a-gl~~~ni~~va~ai~~v~  128 (420)
                      . ..+..++++++++|.++.
T Consensus       376 ~~~~t~edid~l~~aL~~~~  395 (410)
T PRK13392        376 TPLHDDEDIDALVAALVAIW  395 (410)
T ss_pred             CCCCCHHHHHHHHHHHHHHH
Confidence            4 567789999999999884

>PRK07908 hypothetical protein; Provisional

Probab=89.41  E-value=2  Score=43.07  Aligned_cols=81  Identities=16%  Similarity=0.225  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHHhcceEEcCC--------C--ceec
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD--------G--RISM  109 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~~~~IY~~~~--------G--Rinv  109 (420)
                      ++++.++++++..|..+.+.|++.    .|.....+.|+|-+.-++ .+++..+-++++|.+.+.        +  ||++
T Consensus       253 ~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~  328 (349)
T PRK07908        253 AEAAADAARLAADRAEMVAGLRAV----GARVVDPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV  328 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC----CcEeccCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe
Confidence            345678899999999999999875    255455477999888775 456665557889988642        1  5676


Q ss_pred             ccCCcCCHHHHHHHHHhh
Q psy16707        110 AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       110 agl~~~ni~~va~ai~~v  127 (420)
                      +  ++..++.+++|+..+
T Consensus       329 ~--~~~~~~~l~~al~~~  344 (349)
T PRK07908        329 R--PRAEVPVLVQALAEI  344 (349)
T ss_pred             C--CCccHHHHHHHHHHH
Confidence            3  678999999999876

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=89.34  E-value=0.68  Score=47.95  Aligned_cols=56  Identities=14%  Similarity=0.213  Sum_probs=41.8

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707        201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV  280 (420)
Q Consensus       201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv  280 (420)
                      |..-...|+++++++.-+.       + +                      +.+.||++|+.+++..+  +.| ||.|++
T Consensus        50 ~~pt~~~L~~~lA~l~g~~-------~-~----------------------i~~~sg~~Ai~~~l~~l--~~~-GD~Vl~   96 (386)
T PRK08045         50 GNPTRDVVQRALAELEGGA-------G-A----------------------VLTNTGMSAIHLVTTVF--LKP-GDLLVA   96 (386)
T ss_pred             CCccHHHHHHHHHHHhCCC-------e-E----------------------EEECCHHHHHHHHHHHH--cCC-CCEEEE
Confidence            4445678888888875321       1 2                      67999999999988644  457 999999


Q ss_pred             cCCCCCCcH
Q psy16707        281 PTPTWGNHI  289 (420)
Q Consensus       281 pdP~w~ny~  289 (420)
                      ++|+|+.+.
T Consensus        97 ~~~~y~~~~  105 (386)
T PRK08045         97 PHDCYGGSY  105 (386)
T ss_pred             cCCCcHHHH
Confidence            999999533

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=89.33  E-value=2.1  Score=43.41  Aligned_cols=52  Identities=13%  Similarity=0.149  Sum_probs=36.4

Q ss_pred             cccceeecCCC--HHHHHHHHHhcceEEcCCC----ceec-ccCCcCCHHHHHHHHHhh
Q psy16707         76 QIGMFCYTGLN--ATQVEKLIKEHSVYLTKDG----RISM-AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        76 Q~GmFs~~gL~--~~qv~~L~~~~~IY~~~~G----Rinv-agl~~~ni~~va~ai~~v  127 (420)
                      ..|+|...-+.  .+.+..+-.+.+|++.+.|    ||+. ..++.++|+.+++.|.++
T Consensus       318 ~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~  376 (377)
T PRK02936        318 GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKV  376 (377)
T ss_pred             ecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence            46766555453  3344444467799998766    7776 578999999999998764

>PRK09064 5-aminolevulinate synthase; Validated

Probab=89.29  E-value=2.7  Score=43.12  Aligned_cols=83  Identities=19%  Similarity=0.249  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-CC--CHHHH-HHHHHhcceEEcC-------C--C--
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-GL--NATQV-EKLIKEHSVYLTK-------D--G--  105 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-gL--~~~qv-~~L~~~~~IY~~~-------~--G--  105 (420)
                      ++....++++..+|+.|.+.|++.+    |+.+..+.+++.+. +-  +..++ ++|.++++|++..       .  +  
T Consensus       296 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~l  371 (407)
T PRK09064        296 KESNEERERHQERAAKLKAALDAAG----IPVMPNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERL  371 (407)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceE
Confidence            3334557888899999999998754    44444444444332 32  22333 4566778999843       1  2  


Q ss_pred             ceecc-cCCcCCHHHHHHHHHhh
Q psy16707        106 RISMA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 Rinva-gl~~~ni~~va~ai~~v  127 (420)
                      ||++. ..+..++++++++|.++
T Consensus       372 Ris~~~~~t~edi~~l~~~l~~~  394 (407)
T PRK09064        372 RITPTPFHTDEMIDHLVEALVEV  394 (407)
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHH
Confidence            56653 44778999999999987

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=89.29  E-value=3  Score=43.78  Aligned_cols=107  Identities=21%  Similarity=0.198  Sum_probs=55.5

Q ss_pred             HHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCC---CCC------CHHHHHHHHHHHc
Q psy16707        147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAP---IIG------APDFGKLAAQLAY  217 (420)
Q Consensus       147 i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p---~~G------~~~fr~a~~~~~~  217 (420)
                      ++.+.+.-.+. ..+.|||...+     .  .+.|.|++|......+.-..+|..   ..|      ++.+...-++.+|
T Consensus         8 i~~li~~e~~r-q~~~l~LiaSE-----N--~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF   79 (399)
T PF00464_consen    8 IYELIEKEEER-QRSTLNLIASE-----N--YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELF   79 (399)
T ss_dssp             HHHHHHHHHHH-HHHSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-HhcCccccCcc-----c--ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHh
Confidence            45555444332 34669998885     2  578888888766543322223321   334      4555666666778


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      |.+.    +.--+.                    ||+.||+.|...+...|  +.| ||+|+..++.-+-|
T Consensus        80 ~~~~----~~w~an--------------------vqp~SGs~An~av~~aL--l~p-GD~Im~l~l~~GGH  123 (399)
T PF00464_consen   80 GAEP----KEWYAN--------------------VQPHSGSQANLAVYMAL--LKP-GDTIMGLSLPHGGH  123 (399)
T ss_dssp             T-ST----TTEEEE-----------------------SSHHHHHHHHHHHH--T-T-T-EEEEEEGGGT--
T ss_pred             CCCc----ccceEE--------------------eecCCchHHHHHHHHHH--Hhh-cCcEEecChhhccc
Confidence            8751    122333                    89999999887766544  458 99999987765544

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=89.21  E-value=0.9  Score=46.98  Aligned_cols=58  Identities=17%  Similarity=0.169  Sum_probs=44.3

Q ss_pred             CCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcC
Q psy16707        203 IGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPT  282 (420)
Q Consensus       203 ~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvpd  282 (420)
                      ....+|.+.++++.-+++        +                      +.+.||+.|+..++..+  +.| ||.|++++
T Consensus        53 p~~~~lE~~lA~l~g~~~--------~----------------------l~~~sG~~Ai~~~l~~l--l~~-GD~Vlv~~   99 (385)
T PRK08574         53 PTLRPLEEALAKLEGGVD--------A----------------------LAFNSGMAAISTLFFSL--LKA-GDRVVLPM   99 (385)
T ss_pred             ccHHHHHHHHHHHhCCCc--------E----------------------EEeCCHHHHHHHHHHHH--hCC-CCEEEEcC
Confidence            356789999998763322        1                      56899999998877533  457 99999999


Q ss_pred             CCCCCcHHHHh
Q psy16707        283 PTWGNHIPICK  293 (420)
Q Consensus       283 P~w~ny~~i~~  293 (420)
                      |+|+.+...++
T Consensus       100 ~~y~~~~~~~~  110 (385)
T PRK08574        100 EAYGTTLRLLK  110 (385)
T ss_pred             CCchhHHHHHH
Confidence            99999877664

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=89.19  E-value=0.62  Score=47.46  Aligned_cols=45  Identities=27%  Similarity=0.294  Sum_probs=38.6

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.+||.||++++..+ .+.| ||+|++|.-+|+.....+..+|++
T Consensus        44 ~~~~sgt~Al~~al~~l-~~~~-gdeVi~p~~t~~~~~~ai~~~G~~   88 (363)
T PF01041_consen   44 VAVSSGTSALHLALRAL-GLGP-GDEVIVPAYTFPATASAILWAGAE   88 (363)
T ss_dssp             EEESSHHHHHHHHHHHT-TGGT-TSEEEEESSS-THHHHHHHHTT-E
T ss_pred             EEeCChhHHHHHHHHhc-CCCc-CceEecCCCcchHHHHHHHHhccE
Confidence            67999999999999866 3567 999999999999999999999997

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=89.07  E-value=2.4  Score=42.02  Aligned_cols=83  Identities=12%  Similarity=0.220  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecCC-------C-HHHHHHHHHhcceEEcCC-----C-
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGL-------N-ATQVEKLIKEHSVYLTKD-----G-  105 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~gL-------~-~~qv~~L~~~~~IY~~~~-----G-  105 (420)
                      +.++++.+|+..+++.|.+.|.+...   +..+. .+.+|++|.-.       . .+-.++|.++..+++...     + 
T Consensus       244 ~g~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~  320 (345)
T cd06450         244 DGYGEHIDRIVDLAKYLAELIRADPG---FELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNV  320 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEE
Confidence            56788899999999999999976532   33222 46788887622       2 345567766545555432     2 


Q ss_pred             -ceecccC--CcCCHHHHHHHHHh
Q psy16707        106 -RISMAGV--TSKNVGYLAKAIHA  126 (420)
Q Consensus       106 -Rinvagl--~~~ni~~va~ai~~  126 (420)
                       ||++..-  +.++||+++++|.+
T Consensus       321 lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         321 LRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHh
Confidence             8888874  77899999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=89.04  E-value=1.8  Score=43.63  Aligned_cols=81  Identities=16%  Similarity=0.245  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHHHHhcceEEcCCC----ceeccc-CCcCCHH
Q psy16707         46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKLIKEHSVYLTKDG----RISMAG-VTSKNVG  118 (420)
Q Consensus        46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv~~L~~~~~IY~~~~G----Rinvag-l~~~ni~  118 (420)
                      ++++++.+|+.+.+.|++.+....|..+.. .|+|-..-+  +.+++...-.+.+|++.+.|    ||+++. .+..+++
T Consensus       291 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~  369 (379)
T TIGR00707       291 LLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEID  369 (379)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHH
Confidence            455566666666666655433223434433 465433333  34454444456799998765    666654 7889999


Q ss_pred             HHHHHHHhh
Q psy16707        119 YLAKAIHAN  127 (420)
Q Consensus       119 ~va~ai~~v  127 (420)
                      .+.++|.++
T Consensus       370 ~~~~~l~~~  378 (379)
T TIGR00707       370 EAVSALEEA  378 (379)
T ss_pred             HHHHHHHHh
Confidence            999988764

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=89.04  E-value=0.77  Score=45.30  Aligned_cols=44  Identities=11%  Similarity=-0.075  Sum_probs=36.2

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.|.|+|.++..++..+  +.| ||.|+++.|+++++...+..+|++
T Consensus        79 ~~~~Gst~a~~~~l~al--~~~-gd~Vlv~~~~h~s~~~~~~~~g~~  122 (294)
T cd00615          79 FLVNGTSSSNKAVILAV--CGP-GDKILIDRNCHKSVINGLVLSGAV  122 (294)
T ss_pred             EEcCcHHHHHHHHHHHc--CCC-CCEEEEeCCchHHHHHHHHHCCCE
Confidence            45888899988876533  557 999999999999988888888865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PLN02656 tyrosine transaminase

Probab=88.96  E-value=3.8  Score=42.33  Aligned_cols=101  Identities=19%  Similarity=0.156  Sum_probs=64.3

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cccccccceeecCCC-------
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLN-------   86 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~-~i~~Q~GmFs~~gL~-------   86 (420)
                      +.+++.....++..+|++..  ..|   ++.++++++..|..+.+.|++.+  + +. ...-+-|||.+.-++       
T Consensus       278 ~~~~s~~~q~a~~~~l~~~~--~~~---~~~~~~~~~~~r~~~~~~L~~~~--~-~~~~~~p~gg~~~w~~l~~~~~~~~  349 (409)
T PLN02656        278 LGGPATFIQAAVPTILEQTD--ESF---FKKTINILKQSSDICCDRIKEIP--C-ITCPHKPEGSMAVMVKLNLSLLEDI  349 (409)
T ss_pred             hcCCCHHHHHHHHHHHhcCc--HHH---HHHHHHHHHHHHHHHHHHHhhCC--C-CcCCcCCCeEEEEEEecchhhcCCC
Confidence            44566677888888887522  234   55567778888999999998752  2 22 234577899886552       


Q ss_pred             --H-HHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         87 --A-TQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 --~-~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                        . +.+..+-++.+|.+.+..        ||+++.    +-+.+.+++...
T Consensus       350 ~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~----~~e~l~eal~rl  397 (409)
T PLN02656        350 SDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA----DPSSLEEALGRI  397 (409)
T ss_pred             CCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC----CHHHHHHHHHHH
Confidence              3 335566678899887642        566663    245566665443

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=88.94  E-value=3.4  Score=42.26  Aligned_cols=82  Identities=18%  Similarity=0.302  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-ccccccee--ecCCCHHHHHHHHHhcceEEcC--------------CC
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFC--YTGLNATQVEKLIKEHSVYLTK--------------DG  105 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~GmFs--~~gL~~~qv~~L~~~~~IY~~~--------------~G  105 (420)
                      ...+++|+..+|+.|.+.|+++.  + +.-+ ..+.++++  +-+++.+++..+-++++|.+..              .|
T Consensus       294 ~~~~~~~~~~l~~~l~~~l~~~~--g-~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~  370 (401)
T PRK10874        294 INQAESWSRSLATLAEDALAKLP--G-FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTG  370 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC--C-EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCC
Confidence            34578999999999999987642  1 1111 13445554  4477767775444667997753              12


Q ss_pred             --ceecccCCc-CCHHHHHHHHHhh
Q psy16707        106 --RISMAGVTS-KNVGYLAKAIHAN  127 (420)
Q Consensus       106 --Rinvagl~~-~ni~~va~ai~~v  127 (420)
                        |||+...|+ .+|+.++++|.++
T Consensus       371 ~iRiS~~~~nt~edid~ll~al~~~  395 (401)
T PRK10874        371 TLRASFAPYNTQSDVDALVNAVDRA  395 (401)
T ss_pred             EEEEEecccCCHHHHHHHHHHHHHH
Confidence              666665554 7899999998875

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=88.92  E-value=0.88  Score=47.33  Aligned_cols=38  Identities=13%  Similarity=0.112  Sum_probs=29.9

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +.+.+|+.|+.+++..+  +.| ||.|++++|+|+....++
T Consensus        83 i~~ssG~~Ai~~~l~al--l~~-GD~Vi~~~~~y~~~~~~~  120 (398)
T PRK08249         83 TAFSTGMAAISNTLYTF--LKP-GDRVVSIKDTYGGTNKIF  120 (398)
T ss_pred             EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCchHHHHHHH
Confidence            56889999998887533  457 999999999999765443

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=88.84  E-value=4  Score=41.04  Aligned_cols=87  Identities=10%  Similarity=0.129  Sum_probs=52.2

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .+++.+....-.++|.....++...|.++    .|.   +..+++++..|..+.+.|++.+    |.....+-|+|.+.-
T Consensus       226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~---~~~r~~l~~~~~~~~~~l~~~g----~~~~~~~g~~~~~~~  294 (350)
T TIGR03537       226 SFLRKLRANFGVASPDFVQAAAKAAWSDD----NHV---LERRKIFKRKRDLFIEFFNKVG----LEYLYPDATFYLWVK  294 (350)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHhCCc----HHH---HHHHHHHHHHHHHHHHHHHHCC----CcccCCCeEEEEEEE
Confidence            34444332222244444555555556542    354   4467888888989998888753    444556779987664


Q ss_pred             C----C-HHHHHHHHHhcceEEcC
Q psy16707         85 L----N-ATQVEKLIKEHSVYLTK  103 (420)
Q Consensus        85 L----~-~~qv~~L~~~~~IY~~~  103 (420)
                      +    + .+-++.|. +++|++.+
T Consensus       295 ~~~~~~~~~l~~~L~-~~gv~v~~  317 (350)
T TIGR03537       295 VPSGIDAKDYALRLL-ENGIVVAP  317 (350)
T ss_pred             CCCCCCHHHHHHHHH-HCCEEEcC
Confidence            4    3 33455665 47999874

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=88.83  E-value=4.2  Score=41.86  Aligned_cols=85  Identities=19%  Similarity=0.320  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHHHhcceEEcC------------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTK------------  103 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~GmFs~~-----gL~~~qv~~L~~~~~IY~~~------------  103 (420)
                      .++++.+|++++|+.+.+.|++.|    |..... ....|-+.     +++.+++..+-++++|.+..            
T Consensus       280 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~  355 (416)
T PRK00011        280 EFKEYAQQVVKNAKALAEALAERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFV  355 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCC
Confidence            467788999999999999998754    222211 11122222     33556666555677888752            


Q ss_pred             CC--ceec-----ccCCcCCHHHHHHHHHhhCCC
Q psy16707        104 DG--RISM-----AGVTSKNVGYLAKAIHANGSL  130 (420)
Q Consensus       104 ~G--Rinv-----agl~~~ni~~va~ai~~v~~~  130 (420)
                      .+  |++.     .|++.+++++++++|.++...
T Consensus       356 ~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~  389 (416)
T PRK00011        356 TSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN  389 (416)
T ss_pred             CCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence            11  4432     367889999999999987443

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=88.81  E-value=1.6  Score=45.09  Aligned_cols=80  Identities=15%  Similarity=0.121  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CHHHHHHHHHhcceEEcCCC----ceecccC-Cc
Q psy16707         47 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKDG----RISMAGV-TS  114 (420)
Q Consensus        47 ~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~~qv~~L~~~~~IY~~~~G----Rinvagl-~~  114 (420)
                      +++++..|+.|.+.|++.+....+..-....|+|...-+       +.+-++.|.+ .+|++...|    ||+++-. +.
T Consensus       306 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~-~Gv~v~~~g~~~lRl~~~~~~~~  384 (403)
T PRK05093        306 LEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAE-EGVMVLVAGPDVLRFAPSLVIEE  384 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHH-CCeEEecCCCCEEEEeCCCCCCH
Confidence            356666677777777765432222223445577766544       2234555654 589998765    5665555 88


Q ss_pred             CCHHHHHHHHHhh
Q psy16707        115 KNVGYLAKAIHAN  127 (420)
Q Consensus       115 ~ni~~va~ai~~v  127 (420)
                      ..|+...+.|.++
T Consensus       385 ~~i~~~~~~l~~~  397 (403)
T PRK05093        385 ADIDEGLARFEKA  397 (403)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888888765

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=88.50  E-value=2.1  Score=44.56  Aligned_cols=85  Identities=7%  Similarity=0.069  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH----HHHHHHHHhCCeEEeCCC------cEE
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKDG------RIS  399 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~----~~v~~Ll~e~~Vy~~p~g------Ris  399 (420)
                      +.+.++.+.++++++.+.+.+.+..      +..-....|+|.|+-++.    ..+...+.+.||++.+.+      ||+
T Consensus       316 l~~~~~~~g~~l~~~l~~l~~~~~~------~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~  389 (412)
T TIGR02407       316 FEKAVQRKSEIIQERLDRIVAEYPE------LIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLL  389 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCC------ceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEE
Confidence            3455555555555554444433211      111244679999876642    233333457899997654      766


Q ss_pred             Ecc-cCCCCHHHHHHHHHHHhC
Q psy16707        400 MAG-VTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       400 ~ag-l~~~ni~~la~AI~~vv~  420 (420)
                      .+- ++++.++++.++++++++
T Consensus       390 p~l~~t~~~i~~~~~~l~~~l~  411 (412)
T TIGR02407       390 PPLTIDEETLQQGLDILEQAVE  411 (412)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHh
Confidence            654 588889999999998863

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=88.43  E-value=4.5  Score=40.79  Aligned_cols=100  Identities=15%  Similarity=0.231  Sum_probs=64.7

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHH-
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQ-   89 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~q-   89 (420)
                      +..|+. +.....++...|.|++    |.+   .++++++..|+.|.+.|++++    |...  ..|+|.+..+ +.++ 
T Consensus       224 ~~~~~v-s~~~q~a~~~~L~~~~----~~~---~~~~~~~~~r~~l~~~L~~~g----~~~~--~~~~f~~~~~~~~~~l  289 (339)
T PRK06959        224 LGAWTV-SGPARHAVRAAFADAA----WQA---AMRERLAADGARLAALLRAHG----FAVH--ATPLFSWTDDPRAAAL  289 (339)
T ss_pred             cCCCCC-cHHHHHHHHHHhCcHH----HHH---HHHHHHHHHHHHHHHHHHHCC----CCcc--CcceEEEEeCCCHHHH
Confidence            334543 3446677888888754    443   467888889999999998875    3222  2578877765 3333 


Q ss_pred             HHHHHHhcceEEcCCC-----ceecccCCcCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~~G-----Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .+.| .+++|.+..-|     ||++.| +....+++.+++.++
T Consensus       290 ~~~l-~~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~  330 (339)
T PRK06959        290 HAAL-ARRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAEC  330 (339)
T ss_pred             HHHH-HhCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence            4445 46699885322     777643 345778898888765

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=88.35  E-value=1.3  Score=45.79  Aligned_cols=38  Identities=13%  Similarity=0.172  Sum_probs=29.1

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +.+.+|+.|+.+++..+  +.| ||.|++++|.|+.....+
T Consensus        78 v~~~sG~~Ai~~~l~al--~~~-Gd~Vi~~~~~y~~t~~~~  115 (391)
T TIGR01328        78 VATSSGMGAIAATLLTI--LKA-GDHLISDECLYGCTFALL  115 (391)
T ss_pred             EEECCHHHHHHHHHHHH--hCC-CCEEEEecCcchHHHHHH
Confidence            56899999998877544  457 999999999887654443

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PLN02509 cystathionine beta-lyase

Probab=88.27  E-value=1.6  Score=46.55  Aligned_cols=72  Identities=15%  Similarity=0.110  Sum_probs=47.2

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707        195 LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG  274 (420)
Q Consensus       195 ~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~  274 (420)
                      ..+.|... |.| .++++.+++-...+    .+..                      +.+.||+.++.++..+   +.| 
T Consensus       123 ~~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~a----------------------i~~~SG~aAi~~il~l---l~~-  170 (464)
T PLN02509        123 GPYDYTRS-GNP-TRDALESLLAKLDK----ADRA----------------------FCFTSGMAALSAVTHL---IKN-  170 (464)
T ss_pred             CCCccCCC-CCH-HHHHHHHHHHHHhC----CCEE----------------------EEeCcHHHHHHHHHHH---hCC-
Confidence            35779876 876 46666666522211    1112                      5578899998766543   447 


Q ss_pred             CCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        275 EKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       275 gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                      ||.|++++|.|+.+...+    ...|++
T Consensus       171 GD~VI~~~~~y~~t~~ll~~~l~~~G~~  198 (464)
T PLN02509        171 GEEIVAGDDVYGGSDRLLSQVVPRSGVV  198 (464)
T ss_pred             CCEEEEcCCchhhHHHHHHHHHHHCCeE
Confidence            999999999999987444    345654

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=88.16  E-value=2.5  Score=42.55  Aligned_cols=79  Identities=16%  Similarity=0.271  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---cccccceeec--CCCHHHH-HHHHHhcceEEcCC-----------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD-----------  104 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i---~~Q~GmFs~~--gL~~~qv-~~L~~~~~IY~~~~-----------  104 (420)
                      .++.+++++..+++.|.+.|++.+.   +..+   ..+.++|++.  +.+.+++ ++| .+++|++...           
T Consensus       272 g~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~  347 (373)
T cd06453         272 GMEAIAAHEHELTAYALERLSEIPG---VRVYGDAEDRAGVVSFNLEGIHPHDVATIL-DQYGIAVRAGHHCAQPLMRRL  347 (373)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCccccCCeEEEEECCcCHHHHHHHH-HHCCEEeccCccchhHHHHHh
Confidence            3577888888999999999987531   2222   2245677664  4566665 455 5689887432           


Q ss_pred             ---C--ceecccC-CcCCHHHHHHHH
Q psy16707        105 ---G--RISMAGV-TSKNVGYLAKAI  124 (420)
Q Consensus       105 ---G--Rinvagl-~~~ni~~va~ai  124 (420)
                         |  ||++... +.+++|+++++|
T Consensus       348 ~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         348 GVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CCCCeEEEEecCCCCHHHHHHHHhhC
Confidence               1  5555543 447788777763

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=88.14  E-value=3.9  Score=41.76  Aligned_cols=108  Identities=18%  Similarity=0.205  Sum_probs=67.9

Q ss_pred             ccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC-CCCCCcccCCCC-ceEEec--C--C
Q psy16707        305 FYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQI-GMFCYT--G--L  376 (420)
Q Consensus       305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~g-~~~~w~~i~~q~-GmF~~~--~--l  376 (420)
                      .+.+||.++.......|     +.- .++  ++.+.+|.++.++.+++.|++++ .......-..+. ..+++.  +  +
T Consensus       224 ~~~Tp~~~~i~al~~al-----~~l-~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~  297 (349)
T TIGR01364       224 MYNTPPTFAIYVSGLVF-----KWL-KEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEEL  297 (349)
T ss_pred             CCCCCcHHHHHHHHHHH-----HHH-HHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhH
Confidence            44688887777665544     211 233  78888999999999999999984 321111000133 334443  2  2


Q ss_pred             CHHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        377 NATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       377 ~~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                      ..++.. .+.+.|+++.++    |  |+|+.+- +.++|+.+.++++++.
T Consensus       298 ~~~~~~-~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~  346 (349)
T TIGR01364       298 EKRFLK-EAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQ  346 (349)
T ss_pred             hHHHHH-HHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHH
Confidence            233334 446789977655    2  9997654 6788999999999865

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>KOG0633|consensus

Probab=88.07  E-value=7.9  Score=38.66  Aligned_cols=99  Identities=17%  Similarity=0.191  Sum_probs=57.4

Q ss_pred             chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec---CCC----HHHHH
Q psy16707        310 PIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLN----ATQVE  382 (420)
Q Consensus       310 p~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~---~l~----~~~v~  382 (420)
                      +..|...+...|+|..     .+.++..++.+.+-|..|+++|.+...=++  ++-.-..-|..+   |-+    .....
T Consensus       259 S~~~s~~AL~Als~~n-----~kkme~~rdaiv~er~RL~keLt~v~~~~~--~~gg~daNFiLi~v~~~~n~~akkly~  331 (375)
T KOG0633|consen  259 SVAGSVAALAALSDSN-----GKKMEDVRDAIVRERERLFKELTEVPFLND--YPGGSDANFILIEVTGGDNGMAKKLYK  331 (375)
T ss_pred             cchhHHHHHHhcCccc-----chHHHHHHHHHHHHHHHHHHHhhcCccccC--CCCcccccEEEEEEcCCCcHHHHHHHH
Confidence            4556666666677543     356677889999999999999988653222  111222334432   222    23446


Q ss_pred             HHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        383 KLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       383 ~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~  417 (420)
                      ++..++||.+---       |  ||++. -.++| +-+-+-+++
T Consensus       332 q~at~~gVvVRfrgse~~c~G~lRitvG-t~Een-tvL~k~~K~  373 (375)
T KOG0633|consen  332 QDATKMGVVVRFRGSEEGCKGYLRITVG-TPEEN-TVLMKCLKQ  373 (375)
T ss_pred             HHHHhcceEEEEcCCccccceeEEEEcC-Ccccc-hHHHHHHHh
Confidence            6778999988431       3  88864 44444 334444443

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=87.88  E-value=3.6  Score=41.24  Aligned_cols=92  Identities=16%  Similarity=0.225  Sum_probs=59.4

Q ss_pred             ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---CCCHHHH-HHH
Q psy16707         18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLNATQV-EKL   93 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---gL~~~qv-~~L   93 (420)
                      .+..+..++...|.+.    .|   ++.++++++..|..|.+.|.       |. +..+.|+|.+.   +.+.+++ ++|
T Consensus       254 ~~~~~~~~a~~~l~~~----~~---~~~~~~~~~~~r~~l~~~l~-------~~-~~~~~~~~i~~~~~~~~~~~~~~~l  318 (361)
T PRK00950        254 LTRLSQAAAIAALSDK----EY---IEKSIEHGIKSREYLYNELP-------FK-VYPSEANFVLVDVTPMTAKEFCEEL  318 (361)
T ss_pred             CCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHhhcC-------ee-ECCCcceEEEEECCCCCHHHHHHHH
Confidence            3445666677777752    34   44567788888888888774       22 23455777665   3445554 455


Q ss_pred             HHhcceEEcC------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTK------DG----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~------~G----Rinvagl~~~ni~~va~ai~~v  127 (420)
                       .+++|++.+      .|    ||+++  +...++++.++|.++
T Consensus       319 -~~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~i  359 (361)
T PRK00950        319 -LKRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEI  359 (361)
T ss_pred             -HHCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHH
Confidence             467998853      11    67776  667899999998765

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=87.69  E-value=1.1  Score=46.23  Aligned_cols=36  Identities=17%  Similarity=0.356  Sum_probs=29.7

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      +.+.||++|+.+++..+  +.| ||.|++++|+|+.+..
T Consensus        70 ~~~~gg~~Ai~~~l~al--l~~-GD~Vl~~~p~y~~~~~  105 (382)
T TIGR02080        70 VVTNTGMSAIHLVTTAL--LGP-DDLLVAPHDCYGGTYR  105 (382)
T ss_pred             EEEcCHHHHHHHHHHHH--cCC-CCEEEEcCCCcHHHHH
Confidence            67999999999988644  457 9999999999996443

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=87.64  E-value=4.4  Score=41.44  Aligned_cols=107  Identities=16%  Similarity=0.209  Sum_probs=67.2

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cc---cccccceeec-CCC
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPWN-HI---TDQIGMFCYT-GLN   86 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~--el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~-~i---~~Q~GmFs~~-gL~   86 (420)
                      .+.+||.++-.-...-|.      ...+  .++.+.+|.+.+.+.|++.|.+.+.-.-+. .-   ....+-|+|. |++
T Consensus       234 t~~tp~i~~i~~l~~al~------~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~  307 (361)
T TIGR01366       234 TYNTPAIATLALLAEQID------WMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDID  307 (361)
T ss_pred             CCCCchHHHHHHHHHHHH------HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccC
Confidence            356777774333332222      1122  266777999999999999998776321121 00   1112556764 578


Q ss_pred             HHHH-HHHHHhcceEEcCC--------CceecccC-CcCCHHHHHHHHHhh
Q psy16707         87 ATQV-EKLIKEHSVYLTKD--------GRISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 ~~qv-~~L~~~~~IY~~~~--------GRinvagl-~~~ni~~va~ai~~v  127 (420)
                      ++++ +.| ++++|.+...        =||++.|- +.++|+++++||.++
T Consensus       308 ~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~  357 (361)
T TIGR01366       308 AATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWV  357 (361)
T ss_pred             HHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            8888 567 5569887543        37887774 458999999999886

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=87.60  E-value=5.9  Score=39.77  Aligned_cols=96  Identities=10%  Similarity=0.094  Sum_probs=66.0

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L   93 (420)
                      +++..+-.++...|++.    .|.++   +++.++..|+.+.+.|++.+    |..+ ...|+|.+.-+.   .+-.+.|
T Consensus       252 ~~~~~~q~~~~~~l~~~----~~~~~---~~~~~~~~~~~~~~~l~~~~----~~~~-~~~g~~i~~~~~~~~~~~~~~l  319 (359)
T PRK03158        252 NTTRIAQYAAIAALEDQ----AFLKE---CVEKNAEGLEQYYAFCKEYG----LFYY-PSQTNFIFVDTGRDANELFEAL  319 (359)
T ss_pred             CCCHHHHHHHHHHhcCH----HHHHH---HHHHHHHHHHHHHHHHHHCC----CeeC-CCcCcEEEEECCCCHHHHHHHH
Confidence            45666778888888763    46554   45567777888888888763    3333 456888888653   3445566


Q ss_pred             HHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      . +++|.+.+.      |  ||+++  ++..++++.+||.++
T Consensus       320 ~-~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~  358 (359)
T PRK03158        320 L-KKGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL  358 (359)
T ss_pred             H-HCCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence            5 579988763      2  66666  678899999998764

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=87.47  E-value=1.6  Score=44.56  Aligned_cols=63  Identities=14%  Similarity=0.114  Sum_probs=44.9

Q ss_pred             CCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707        196 DKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP  273 (420)
Q Consensus       196 ~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p  273 (420)
                      .+.|.  +..-..+|.++++++. |..       ..                      +.+.+|+.|+..++..+  +.|
T Consensus        31 ~~~y~r~~~p~~~~le~~la~l~-g~~-------~a----------------------~~~~sG~~Ai~~~l~~l--~~~   78 (369)
T cd00614          31 GYIYSRIGNPTVDALEKKLAALE-GGE-------AA----------------------LAFSSGMAAISTVLLAL--LKA   78 (369)
T ss_pred             CceeECCCChhHHHHHHHHHHHH-CCC-------CE----------------------EEEcCHHHHHHHHHHHH--cCC
Confidence            34555  4455678888888865 422       11                      56889999999988654  447


Q ss_pred             CCCEEEEcCCCCCCcHHH
Q psy16707        274 GEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       274 ~gd~VlvpdP~w~ny~~i  291 (420)
                       ||.|++++|+|+.....
T Consensus        79 -gd~Vl~~~~~y~~~~~~   95 (369)
T cd00614          79 -GDHVVASDDLYGGTYRL   95 (369)
T ss_pred             -CCEEEECCCCcchHHHH
Confidence             99999999999875543

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=87.34  E-value=1.4  Score=46.04  Aligned_cols=33  Identities=24%  Similarity=0.473  Sum_probs=27.4

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN  287 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n  287 (420)
                      +.+.+|+.|+.+++..+  +.| ||.|++++|+|+.
T Consensus        79 v~~~sG~~Ai~~~l~al--l~p-GD~Vvv~~p~Y~~  111 (405)
T PRK08776         79 VITATGMGAINLVLNAL--LQP-GDTLVVPHDAYGG  111 (405)
T ss_pred             EEEcCHHHHHHHHHHHH--hCC-CCEEEEccCCchH
Confidence            56788899998887644  457 9999999999987

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=87.21  E-value=7.2  Score=39.92  Aligned_cols=75  Identities=11%  Similarity=0.083  Sum_probs=49.4

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC--HHHH-HHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQV-EKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~--~~qv-~~L   93 (420)
                      +++.....++...+.++       +.++..+++++..|..+.+.|++.     +....-+.|+|.+.-++  ..++ +.|
T Consensus       277 ~~~~~~q~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~l  344 (396)
T PRK09147        277 AMPPAVQAASIAAWNDE-------AHVRENRALYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVPGDDTEFARRL  344 (396)
T ss_pred             CCCHHHHHHHHHHhcch-------hHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECCCCHHHHHHHH
Confidence            34444444444555432       346667888888899999888763     33345688999998764  4444 667


Q ss_pred             HHhcceEEcC
Q psy16707         94 IKEHSVYLTK  103 (420)
Q Consensus        94 ~~~~~IY~~~  103 (420)
                      .++++|.+.+
T Consensus       345 l~~~gv~v~p  354 (396)
T PRK09147        345 YADYNVTVLP  354 (396)
T ss_pred             HHhCCEEEeC
Confidence            7788998854

>PLN02624 ornithine-delta-aminotransferase

Probab=87.02  E-value=3.1  Score=44.31  Aligned_cols=40  Identities=20%  Similarity=0.241  Sum_probs=30.6

Q ss_pred             HHHHHHHHhCCeEEeCCC----cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707        379 TQVEKLIKEHSVYLTKDG----RISM-AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       379 ~~v~~Ll~e~~Vy~~p~g----Ris~-agl~~~ni~~la~AI~~vv  419 (420)
                      +.++.| .+.||++.|.+    ||+. ..++.++|+++.+++.+++
T Consensus       398 ~~~~~L-~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l  442 (474)
T PLN02624        398 DVCLKL-KERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVL  442 (474)
T ss_pred             HHHHHH-HhCCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence            344555 68999999864    6764 3488999999999998875

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=86.92  E-value=4.5  Score=41.57  Aligned_cols=83  Identities=12%  Similarity=0.182  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccceeec--CCCHHHHHHHHHhcceEEcC--------------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT--GLNATQVEKLIKEHSVYLTK--------------  103 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~--------------  103 (420)
                      .++.+++|+..+++.|.+.|.+...   +.-+.  ...|+++|.  +.+++++...-++++|.+..              
T Consensus       298 g~~~i~~~~~~l~~~l~~~l~~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~  374 (406)
T PRK09295        298 GLNNIAEYEQNLMHYALSQLESVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNV  374 (406)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCC
Confidence            4678899999999999999976421   11111  235787764  66777776555788987732              


Q ss_pred             --CCceecccCCc-CCHHHHHHHHHhh
Q psy16707        104 --DGRISMAGVTS-KNVGYLAKAIHAN  127 (420)
Q Consensus       104 --~GRinvagl~~-~ni~~va~ai~~v  127 (420)
                        .-|||+.-.|+ ++||+++++|.++
T Consensus       375 ~~~iRiS~~~ynt~~did~l~~~l~~i  401 (406)
T PRK09295        375 PAMCRASLAMYNTHEEVDRLVAGLQRI  401 (406)
T ss_pred             CCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence              25777776666 7899999999876

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=86.81  E-value=2.7  Score=44.24  Aligned_cols=87  Identities=20%  Similarity=0.329  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCccccccccce--eecCCCHHHHHHHHHhcceEEcCC----------
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGS----NKPWNHITDQIGMF--CYTGLNATQVEKLIKEHSVYLTKD----------  104 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~----~~~w~~i~~Q~GmF--s~~gL~~~qv~~L~~~~~IY~~~~----------  104 (420)
                      .+.+.+++++..+++.|.+.|.+.|.    +++-    .+.+..  ...|.+.+++..+-++++|++..+          
T Consensus       299 ~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~----~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~  374 (452)
T PTZ00094        299 PEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTD----NHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALN  374 (452)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCC----CceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCC
Confidence            45677889999999999999977542    1111    123443  445788888887778899999643          


Q ss_pred             ---Cceec-----ccCCcCCHHHHHHHHHhhCCCc
Q psy16707        105 ---GRISM-----AGVTSKNVGYLAKAIHANGSLP  131 (420)
Q Consensus       105 ---GRinv-----agl~~~ni~~va~ai~~v~~~p  131 (420)
                         =|++.     .|++.+.|++++++|.++-.++
T Consensus       375 ~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~  409 (452)
T PTZ00094        375 PSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA  409 (452)
T ss_pred             CCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence               45555     3555799999999998875554

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=86.11  E-value=6.2  Score=41.89  Aligned_cols=117  Identities=15%  Similarity=0.117  Sum_probs=76.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .+...-....-.+|.+--.++++-|.+-    .|.+-++.||...+.-|..+.+.|++... +......-..|||-.+-|
T Consensus       319 ~~~~~k~~~~~~~s~~~Q~~la~~l~~G----~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-~~~~~~~p~gG~flwl~l  393 (459)
T COG1167         319 KLLRLKQAADLGPSSLSQAALAAFLLSG----HYDRHLRRLRREYARRRDALLEALAEYLP-ELATWTRPEGGLFLWLEL  393 (459)
T ss_pred             HHHHHHHHhcCCCChHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeeeecCCceEEEEEEc
Confidence            3444444455566666645555555543    57788899999999999999999998776 222233345589999966


Q ss_pred             CH----HHHHHHHHhcceEEcC-------C------CceecccCCcCCHHHHHHHHHhh
Q psy16707         86 NA----TQVEKLIKEHSVYLTK-------D------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~----~qv~~L~~~~~IY~~~-------~------GRinvagl~~~ni~~va~ai~~v  127 (420)
                      .+    ..+...-.+++|-+.+       +      =|+|+++.+...++.-.+.|.++
T Consensus       394 ~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~  452 (459)
T COG1167         394 PEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAAL  452 (459)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            55    3444444455555544       2      27888888877777666655544

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=86.03  E-value=5.8  Score=39.96  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=59.0

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIK   95 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~   95 (420)
                      +++...-.++..+|.++     |   +++..+.+...|..|.+.|++.  +| |.. ..+.|+|-+.-+. .+++..+-.
T Consensus       243 ~~~~~~q~~~~~~l~~~-----~---~~~~~~~~~~~r~~l~~~l~~~--~g-~~~-~~~~~~~~~i~~~~~~~~~~~l~  310 (351)
T PRK14807        243 NINSLSQVIALKVLRTG-----V---LKERVNYILNERERLIKELSKI--PG-IKV-YPSKTNFILVKFKDADYVYQGLL  310 (351)
T ss_pred             CcCHHHHHHHHHHHhHH-----H---HHHHHHHHHHHHHHHHHHHHhC--CC-cEE-CcCCccEEEEEcCCHHHHHHHHH
Confidence            34455566777777643     2   2223334556677788888653  33 553 4567888877663 444443334


Q ss_pred             hcceEEcCC-------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         96 EHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        96 ~~~IY~~~~-------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +++|.+..-       +  ||+++  ++...+++.++|.++
T Consensus       311 ~~gV~v~~~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~  349 (351)
T PRK14807        311 ERGILVRDFSKVEGLEGALRITVS--SCEANDYLINGLKEL  349 (351)
T ss_pred             HCCEEEEECCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHh
Confidence            678988431       1  67765  456788999998764

>PLN02187 rooty/superroot1

Probab=86.03  E-value=4.4  Score=42.92  Aligned_cols=98  Identities=12%  Similarity=0.082  Sum_probs=60.7

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---------CH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---------NA   87 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---------~~   87 (420)
                      +|+...-..+..+|.+..  ..|.   +.+++.++..|+.+++.|++.+  +......-+.|||.+..+         +.
T Consensus       315 ~~s~~~Q~a~~~~L~~~~--~~~l---~~~~~~l~~~r~~l~~~L~~~~--~~~~~~~P~gg~fl~~~l~~~~~~~~~~~  387 (462)
T PLN02187        315 DPATIIQAALPAILEKAD--KNFF---AKKNKILKHNVDLVCDRLKDIP--CVVCPKKPESCTYLLTKLELSLMDNIKDD  387 (462)
T ss_pred             CCCHHHHHHHHHHHhcCc--HHHH---HHHHHHHHHHHHHHHHHHhhCC--CCcCCCCCCEeEEEEeecChhhCCCCCCH
Confidence            456777788888887521  3454   4556778888999999998642  211112346789999844         23


Q ss_pred             -HHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHH
Q psy16707         88 -TQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAK  122 (420)
Q Consensus        88 -~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~  122 (420)
                       +.+..|-++.+|.+.+..        |||++. ...+++.-.+
T Consensus       388 ~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~  430 (462)
T PLN02187        388 IDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALE  430 (462)
T ss_pred             HHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHH
Confidence             445677778899877532        677753 3444333333

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=85.85  E-value=4  Score=42.56  Aligned_cols=83  Identities=16%  Similarity=0.145  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----C--HHHHHHHHHhCCeEEeCCC----cEEE-cccCC
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----N--ATQVEKLIKEHSVYLTKDG----RISM-AGVTS  405 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~--~~~v~~Ll~e~~Vy~~p~g----Ris~-agl~~  405 (420)
                      +.++.+++-+.|.+.|+++....++.......|++.-+-+    .  ...+...+.+.||++.|.|    |+.. ..+++
T Consensus       308 l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~  387 (408)
T PRK04612        308 IAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTD  387 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCH
Confidence            3455666666666666654322122223455676664322    1  2334344578999998865    4442 14788


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      +.|+.+.+++.+++
T Consensus       388 eeid~~l~~l~~~l  401 (408)
T PRK04612        388 AELADGLARLRLAL  401 (408)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988875

>PRK05968 hypothetical protein; Provisional

Probab=85.80  E-value=3.1  Score=43.01  Aligned_cols=44  Identities=18%  Similarity=0.180  Sum_probs=31.2

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH----HHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI----PICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~----~i~~~aG~~  298 (420)
                      +.+.+|+.|+.++...+  +.| ||+|++++|+|+.-.    ..++..|++
T Consensus        82 v~~~sG~~Ai~~al~al--~~~-Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~  129 (389)
T PRK05968         82 RGFASGMAAISSTVLSF--VEP-GDRIVAVRHVYPDAFRLFETILKRMGVE  129 (389)
T ss_pred             EEECCHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence            45788999998776533  457 999999999998633    344445654

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=85.78  E-value=6.3  Score=40.26  Aligned_cols=82  Identities=18%  Similarity=0.333  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccccceee--cCCCHHHHHHHHHhcceEEcC--------------CC
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCY--TGLNATQVEKLIKEHSVYLTK--------------DG  105 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~GmFs~--~gL~~~qv~~L~~~~~IY~~~--------------~G  105 (420)
                      ++.+++|+..+++.|.+.|+++..   +.-. ..+.+++++  .|.+.+++...-++++|.+..              .|
T Consensus       291 ~~~i~~~~~~l~~~l~~~l~~l~g---~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~  367 (398)
T TIGR03392       291 IAAAEAWSVSLADLAEERLAQLPG---FRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSG  367 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC---eEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCC
Confidence            457889999999999999876521   1111 124567764  367766665444678998753              22


Q ss_pred             --ceecccC-CcCCHHHHHHHHHhh
Q psy16707        106 --RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 --Rinvagl-~~~ni~~va~ai~~v  127 (420)
                        ||++... +.++|++++++|.++
T Consensus       368 ~iRvS~~~~~t~~ei~~l~~~l~~~  392 (398)
T TIGR03392       368 TLRASFAPYNTQQDVDALVDAVGAA  392 (398)
T ss_pred             EEEEEeeccCCHHHHHHHHHHHHHH
Confidence              5666654 458899999998775

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=85.67  E-value=28  Score=36.98  Aligned_cols=76  Identities=20%  Similarity=0.191  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--cCC---C------------HHHHHHHHHhCCeEEeCCC----c
Q psy16707        339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGL---N------------ATQVEKLIKEHSVYLTKDG----R  397 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~~l---~------------~~~v~~Ll~e~~Vy~~p~g----R  397 (420)
                      ..=.+.++.+.+.+++.|.+  | ++....+||.+  +..   +            ..+...| -+.|||+.|+.    =
T Consensus       330 ~~~~~L~~gl~~~~~~~g~~--~-~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~-l~~GV~l~ps~~ea~f  405 (432)
T COG0001         330 ALGERLAEGLRAAAERHGIP--L-TVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHL-LNRGVYLAPSQFEAGF  405 (432)
T ss_pred             HHHHHHHHHHHHHHHHhCCC--e-EEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHH-HhCCcccCCcccccee
Confidence            44444556777777778865  3 36677889884  331   1            1233444 58899999984    4


Q ss_pred             EEEcccCCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl~~~ni~~la~AI~~vv  419 (420)
                      +|.+ -++++|++..+|+.+++
T Consensus       406 lS~a-hte~di~~~~~a~~~~~  426 (432)
T COG0001         406 LSTA-HTEEDIDRTLEAADEAF  426 (432)
T ss_pred             eecc-cCHHHHHHHHHHHHHHH
Confidence            4544 68899999999998775

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=85.66  E-value=1.7  Score=45.24  Aligned_cols=44  Identities=14%  Similarity=0.064  Sum_probs=31.0

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC----CCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW----GNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w----~ny~~i~~~aG~~  298 (420)
                      +.+.+|+.|+..++..+  +.| ||.|++++..|    ..+...++..|++
T Consensus        89 l~~~sG~~Ai~~~l~al--l~~-Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~  136 (403)
T PRK07810         89 FATASGMSAVFTALGAL--LGA-GDRLVAARSLFGSCFVVCNEILPRWGVE  136 (403)
T ss_pred             EEECChHHHHHHHHHHH--hCC-CCEEEEccCCcchHHHHHHHHHHHcCcE
Confidence            67999999998876433  457 99999998555    3344455556664

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=85.62  E-value=2.8  Score=43.14  Aligned_cols=34  Identities=12%  Similarity=0.244  Sum_probs=27.5

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +.+.||+.|+..++..+  +.| ||.|+++++.|+..
T Consensus        73 ~~~~sG~~Ai~~al~al--~~~-Gd~Vl~~~~~~~~t  106 (380)
T TIGR01325        73 VATATGMSAIQAALMTL--LQA-GDHVVASRSLFGST  106 (380)
T ss_pred             EEECCHHHHHHHHHHHH--hCC-CCEEEEecCCcchH
Confidence            56899999999887544  457 99999999998763

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=85.50  E-value=3.7  Score=42.94  Aligned_cols=81  Identities=7%  Similarity=0.145  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCC-CcccCCCCceEEecCCCH----HHHHHHHHhCCeEEeCCC----cEEEc-c--cCCC
Q psy16707        339 DRIISMRQSLKDNLQKEGSNKP-WNHITDQIGMFCYTGLNA----TQVEKLIKEHSVYLTKDG----RISMA-G--VTSK  406 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~g~~~~-w~~i~~q~GmF~~~~l~~----~~v~~Ll~e~~Vy~~p~g----Ris~a-g--l~~~  406 (420)
                      ++++++++.|.+.|+++....+ +..-....|++.++.+++    ..+...+.+.||++.+.+    ||.++ .  ++.+
T Consensus       322 ~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~  401 (425)
T PRK09264        322 KEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEE  401 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHH
Confidence            4555555555555544311111 111134567887765532    233333457899998743    77776 4  5788


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      +|+++.+++.+++
T Consensus       402 ei~~~~~~l~~~l  414 (425)
T PRK09264        402 ELEEGLDILEEAV  414 (425)
T ss_pred             HHHHHHHHHHHHH
Confidence            8999998888775

>PLN02822 serine palmitoyltransferase

Probab=85.49  E-value=3.9  Score=43.62  Aligned_cols=81  Identities=12%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------------HHHHHHHHHhcceEEcCC------
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------------ATQVEKLIKEHSVYLTKD------  104 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------------~~qv~~L~~~~~IY~~~~------  104 (420)
                      ..++++++++++.|.+.|++..   .|.......+.+.++-+.             .+-+++|-++++|++++.      
T Consensus       367 ~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~  443 (481)
T PLN02822        367 PSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLD  443 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcC
Confidence            3566677777777777776542   133333344555544342             234677777889999853      


Q ss_pred             -------Cceecc-cCCcCCHHHHHHHHHhh
Q psy16707        105 -------GRISMA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 -------GRinva-gl~~~ni~~va~ai~~v  127 (420)
                             -||+++ +.++++|+..+++|.++
T Consensus       444 ~~~~~~~lRi~is~~~t~edI~~~~~~l~~~  474 (481)
T PLN02822        444 KCRLPVGIRLFVSAGHTESDILKASESLKRV  474 (481)
T ss_pred             CCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence                   456654 57889999999999876

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=85.46  E-value=7.4  Score=39.82  Aligned_cols=108  Identities=16%  Similarity=0.124  Sum_probs=68.2

Q ss_pred             ccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC-ceEEec--CC-C-
Q psy16707        305 FYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCYT--GL-N-  377 (420)
Q Consensus       305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~-GmF~~~--~l-~-  377 (420)
                      .+.+||.++.......|.     .- .++  ++.+.+|.++..+.+++.|+++|.-.....-..++ +..++.  +. . 
T Consensus       235 ~~~Tp~~~~i~aL~~aL~-----~i-~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~  308 (360)
T PRK05355        235 MYNTPPTFAIYLAGLVFK-----WL-KEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELD  308 (360)
T ss_pred             ccCCCcHHHHHHHHHHHH-----HH-HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHH
Confidence            457888888876665442     11 232  77888999999999999999988311111001133 335543  21 1 


Q ss_pred             HHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        378 ATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 ~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                      .+....+ .+.|+++.++    |  |||+..- +.++|++|.+++++++
T Consensus       309 ~~~~~~~-~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~  356 (360)
T PRK05355        309 KKFLAEA-KAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFE  356 (360)
T ss_pred             HHHHHHH-HHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            2333444 5678887544    3  9997654 5788999999999875

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=85.43  E-value=4.1  Score=40.31  Aligned_cols=81  Identities=19%  Similarity=0.195  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc---ccccceeecC------CCHHHHHHHHHhcceEEcCCC-------c
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT---DQIGMFCYTG------LNATQVEKLIKEHSVYLTKDG-------R  106 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~---~Q~GmFs~~g------L~~~qv~~L~~~~~IY~~~~G-------R  106 (420)
                      ++...+|++..|+.+.+.|++.+    |..+.   ...|++...-      .+.+++...-.+.+|.+.+.+       |
T Consensus       257 ~~~~~~~~~~~~~~~~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iR  332 (355)
T TIGR03301       257 VPARIARYRRNRELLVDGLRALG----FQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFR  332 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEE
Confidence            66677788889999999998764    33222   2356554322      233344433356688886543       7


Q ss_pred             eec-ccCCcCCHHHHHHHHHhh
Q psy16707        107 ISM-AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       107 inv-agl~~~ni~~va~ai~~v  127 (420)
                      |++ ...+.++++.++++|.++
T Consensus       333 is~~~~~~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       333 IGTIGEIDAADIERLLEAIKDA  354 (355)
T ss_pred             EecCCCCCHHHHHHHHHHHHhh
Confidence            776 445779999999998764

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=85.42  E-value=1.8  Score=45.84  Aligned_cols=44  Identities=11%  Similarity=0.299  Sum_probs=33.8

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~  298 (420)
                      +.+.||+.|+.+++..+  +.| ||.|++|.++|..-...    +...|++
T Consensus        80 v~~~SG~aAi~~al~al--l~~-GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~  127 (432)
T PRK06702         80 VATASGQAAIMLAVLNI--CSS-GDHLLCSSTVYGGTFNLFGVSLRKLGID  127 (432)
T ss_pred             EEECCHHHHHHHHHHHh--cCC-CCEEEECCCchHHHHHHHHHHHHHCCCE
Confidence            67999999999888533  457 99999999999855544    4556665

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=85.41  E-value=2.5  Score=44.51  Aligned_cols=84  Identities=13%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--------CHHHHHHH---HHhCCeEEeCCC------cE
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--------NATQVEKL---IKEHSVYLTKDG------RI  398 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--------~~~~v~~L---l~e~~Vy~~p~g------Ri  398 (420)
                      .+.++++++.+.|.+.|+++....++..-....|+|..+-+        +.+....+   +.+.||++.+++      ||
T Consensus       339 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~  418 (443)
T PRK06058        339 DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRL  418 (443)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEE
Confidence            34567777777888888765321112111345566653211        12222222   247899998753      45


Q ss_pred             --EEcccCCCCHHHHHHHHHHHhC
Q psy16707        399 --SMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       399 --s~agl~~~ni~~la~AI~~vv~  420 (420)
                        +++ +++++|+++.+++.++++
T Consensus       419 ~Ppl~-~t~~~i~~~~~~l~~~l~  441 (443)
T PRK06058        419 LPPLV-IGDELLREGLDVLEAALA  441 (443)
T ss_pred             ECCCc-cCHHHHHHHHHHHHHHHH
Confidence              354 899999999999998863

>PRK04311 selenocysteine synthase; Provisional

Probab=85.32  E-value=3.5  Score=44.04  Aligned_cols=92  Identities=14%  Similarity=0.094  Sum_probs=61.5

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCC---C--CHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPII---G--APDFGKLAAQLAYGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~---G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~  234 (420)
                      ..+||++=-.|.++-|..+.++.|.+|...+.....+.+|....   |  ...+.+.++++. |..       .  +   
T Consensus        79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~-Gae-------~--a---  145 (464)
T PRK04311         79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT-GAE-------D--A---  145 (464)
T ss_pred             cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh-CCC-------e--E---
Confidence            35688775567788888888899998887776432233443221   2  257777777754 432       1  1   


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW  285 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w  285 (420)
                                       +.+.+|+.|+.+++..+   .+ ||+|++++..+
T Consensus       146 -----------------~vv~sgtaAl~l~l~~l---~~-GdeVIvs~~e~  175 (464)
T PRK04311        146 -----------------LVVNNNAAAVLLALNAL---AA-GKEVIVSRGEL  175 (464)
T ss_pred             -----------------EEECCHHHHHHHHHHHh---CC-CCEEEEcchhh
Confidence                             56888999998877544   36 89999998643

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=85.24  E-value=4.4  Score=40.52  Aligned_cols=91  Identities=16%  Similarity=0.241  Sum_probs=59.5

Q ss_pred             chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH--HHHHHHHHhc
Q psy16707         20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA--TQVEKLIKEH   97 (420)
Q Consensus        20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~--~qv~~L~~~~   97 (420)
                      ..+..++..+|.++    +|.+   .++++++..|+.|.+.|++.+.   . .+..+.|+|.++.+..  +=.++|. ++
T Consensus       227 ~~~q~~~~~~l~~~----~~~~---~~~~~~~~~~~~l~~~L~~~~~---~-~~~~~~~~f~~~~~~~~~~l~~~l~-~~  294 (330)
T TIGR01140       227 GPARAAGRAALADT----AWQA---ATRARLAAERARLAALLARLGG---L-EVVGGTALFLLVRTPDAAALHEALA-RR  294 (330)
T ss_pred             HHHHHHHHHHHhch----HHHH---HHHHHHHHHHHHHHHHHHhCCC---c-eECCCCCeEEEEEcCCHHHHHHHHH-HC
Confidence            34677888888864    4654   4678999999999999987642   2 2345678998877633  3355665 57


Q ss_pred             ceEEcCCC----------ceecccCCcCCHHHHHHHH
Q psy16707         98 SVYLTKDG----------RISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus        98 ~IY~~~~G----------Rinvagl~~~ni~~va~ai  124 (420)
                      +|++.+..          ||+++.-+ .+ +++..++
T Consensus       295 gi~v~pg~~f~~~~~~~iRi~~~~~~-~~-~~~~~~l  329 (330)
T TIGR01140       295 GILIRDFDNFPGLDPRYLRFALPTDE-EN-DRLEEAL  329 (330)
T ss_pred             CEEEEECCCCCCCCCCEEEEEecCHH-HH-HHHHHhh
Confidence            99987632          45555432 33 6666654

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=85.09  E-value=2.7  Score=44.38  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=30.1

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +.|.+||.|+.+++..+  +.+ ||.|++++..|+.....+
T Consensus        83 v~~sSGt~Al~~al~~l--l~~-Gd~Vi~~~~~y~~t~~~~  120 (433)
T PRK08134         83 IATASGQAALHLAIATL--MGA-GSHIVASSALYGGSHNLL  120 (433)
T ss_pred             EEeCCHHHHHHHHHHHH--hCC-CCEEEEeCCccHHHHHHH
Confidence            56999999999887644  457 999999999998654443

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=85.03  E-value=4.7  Score=40.37  Aligned_cols=85  Identities=16%  Similarity=0.243  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cccccccceeecCCCHHHH-HHHHHhcceEEcCC-----Cceecc
Q psy16707         38 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN-HITDQIGMFCYTGLNATQV-EKLIKEHSVYLTKD-----GRISMA  110 (420)
Q Consensus        38 ~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~-~i~~Q~GmFs~~gL~~~qv-~~L~~~~~IY~~~~-----GRinva  110 (420)
                      ...+.++++++++..+++.|.+.|++.+    +. .+..+.+|+++.--+.+++ +.|.+ .+|++..-     =||++.
T Consensus       276 l~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~  350 (371)
T PRK13520        276 LGREGYRKVVERCMENTRWLAEELKERG----FEPVIEPVLNIVAFDDPNPDEVREKLRE-RGWRVSVTRCPEALRIVCM  350 (371)
T ss_pred             hcHhHHHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCceEEEEecCCHHHHHHHHHH-CCceeccCCCCCEEEEEEE
Confidence            3445677888999999999999998763    33 3345677877753355554 45654 48877542     256654


Q ss_pred             c-CCcCCHHHHHHHHHhh
Q psy16707        111 G-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       111 g-l~~~ni~~va~ai~~v  127 (420)
                      + .+...|+++++++.++
T Consensus       351 ~~~t~edi~~~~~~l~~~  368 (371)
T PRK13520        351 PHVTREHIENFLEDLKEV  368 (371)
T ss_pred             CCCCHHHHHHHHHHHHHH
Confidence            4 3668999999998775

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=85.01  E-value=3.7  Score=41.87  Aligned_cols=81  Identities=14%  Similarity=0.232  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCC-ccccccccceeecCCCH------------HH-HHHHHHhcceEEcCC----Cc
Q psy16707         45 GMADRIISMRQSLKDNLQKEGSNKPW-NHITDQIGMFCYTGLNA------------TQ-VEKLIKEHSVYLTKD----GR  106 (420)
Q Consensus        45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w-~~i~~Q~GmFs~~gL~~------------~q-v~~L~~~~~IY~~~~----GR  106 (420)
                      .+.+++..+++.|.+.|++......+ ..+ ...|+|..+-+.+            .+ .+.| .+++|++.+.    .|
T Consensus       313 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~~~~lR  390 (413)
T cd00610         313 GLLENAAELGEYLRERLRELAEKHPLVGDV-RGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSGGNVIR  390 (413)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCcEEEe-ecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecCCCEEE
Confidence            45566677777777777654332111 112 3445554443322            22 3344 4669999765    37


Q ss_pred             eecccC-CcCCHHHHHHHHHhh
Q psy16707        107 ISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       107 invagl-~~~ni~~va~ai~~v  127 (420)
                      ++++.. ++.+|+.+.++|.++
T Consensus       391 ~~~~~~~t~~~i~~~~~~l~~~  412 (413)
T cd00610         391 LLPPLIITEEEIDEGLDALDEA  412 (413)
T ss_pred             EECCCcCCHHHHHHHHHHHHHh
Confidence            777664 678999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=84.96  E-value=5.4  Score=40.02  Aligned_cols=91  Identities=21%  Similarity=0.265  Sum_probs=59.5

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHh
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKE   96 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~   96 (420)
                      +++.....++..+|++++...+|.       .++...|..|.+.|.+..        ....|+|.+.-+.  -.+.|.+ 
T Consensus       234 ~~~~~~q~~~~~~l~~~~~~~~~~-------~~~~~~r~~l~~~L~~~~--------~~~~~~~~~~~~~--~~~~l~~-  295 (337)
T PRK03967        234 SLNILTMKIVRLALDHYDLIEERI-------DYIIKERERVRRELGEYA--------YPSDANFLLLKLD--AYDYLLE-  295 (337)
T ss_pred             CCCHHHHHHHHHHHhCHHHHHHHH-------HHHHHHHHHHHHHhccCc--------CCCCCcEEEEhHH--HHHHHHH-
Confidence            557888999999998865444443       344455667777776542        2356777776653  4566764 


Q ss_pred             cceEEcCC-----C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         97 HSVYLTKD-----G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        97 ~~IY~~~~-----G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++|.+..-     +  ||+++  ++.+.+.+.++|..+
T Consensus       296 ~gi~v~~~~~~~~~~~Ri~~~--~~~~~~~l~~~l~~~  331 (337)
T PRK03967        296 NGIVVRKLSGRLEGHIRVTVG--KREENDEFIKALKEI  331 (337)
T ss_pred             CCEEEEeCCCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence            58888421     1  66665  346778888888765

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=84.81  E-value=5.3  Score=40.97  Aligned_cols=84  Identities=17%  Similarity=0.110  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cccc-cceeec--C----CCHHHHHHHHHhcceEEcC--------CCc
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQI-GMFCYT--G----LNATQVEKLIKEHSVYLTK--------DGR  106 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~Q~-GmFs~~--g----L~~~qv~~L~~~~~IY~~~--------~GR  106 (420)
                      ++.+.+|.+.+.+.|++.|++.+.-.-+..- ..+. +++++-  +    .+.+.+..|.++ +|++..        .=|
T Consensus       270 ~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vR  348 (378)
T PRK03080        270 LDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLR  348 (378)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEE
Confidence            6888999999999999999876521111100 1122 477763  3    455667777655 566532        237


Q ss_pred             eecccCCc-CCHHHHHHHHHhh
Q psy16707        107 ISMAGVTS-KNVGYLAKAIHAN  127 (420)
Q Consensus       107 invagl~~-~ni~~va~ai~~v  127 (420)
                      |++-+.|+ ++|++++++|.++
T Consensus       349 is~~~~~t~~di~~l~~al~~~  370 (378)
T PRK03080        349 IWCGPTVEPADVEALTPWLDWA  370 (378)
T ss_pred             EecCCCCCHHHHHHHHHHHHHH
Confidence            77666554 8999999999875

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=84.53  E-value=8.5  Score=40.26  Aligned_cols=102  Identities=16%  Similarity=0.158  Sum_probs=65.5

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccccccceeecCCC------
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGLN------   86 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~-i~~Q~GmFs~~gL~------   86 (420)
                      ...+||......+..+|.+..     .+-++.++++++.-|..+++.|++.  ++ +.. ..-+-|||-+..+.      
T Consensus       298 ~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~--~g-~~~~~~P~ga~y~~v~l~~~~~~~  369 (430)
T PLN00145        298 ISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIKEI--KC-ITCPHKPEGSMFVMVKLDLSCLSG  369 (430)
T ss_pred             ccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHhcC--CC-CCCCcCCCeeeEEEeccChhhcCC
Confidence            344455555566667776421     2345667788888899999999764  22 332 24688999997663      


Q ss_pred             ----HHHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         87 ----ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 ----~~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                          .+-+++|.++++|.+.+..        ||+++ .   ..+.+.+++..+
T Consensus       370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~-~---~~~~l~~al~rl  418 (430)
T PLN00145        370 IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA-I---DPPSLEDGLERL  418 (430)
T ss_pred             CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC-C---CHHHHHHHHHHH
Confidence                2356678889999887642        66765 2   356666665543

>TIGR01814 kynureninase kynureninase

Probab=84.48  E-value=6.4  Score=40.53  Aligned_cols=107  Identities=16%  Similarity=0.171  Sum_probs=62.3

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccc-----cccccceeecC-CCH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHI-----TDQIGMFCYTG-LNA   87 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~-~~~~~w~~i-----~~Q~GmFs~~g-L~~   87 (420)
                      ..+||..+..-+..-|.     ..-...++.+++|+..++..|.+.|++. +....+..+     ....|++++.- .+.
T Consensus       284 ~GT~~~~~~~~l~~al~-----~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~  358 (406)
T TIGR01814       284 ISNPPILSVAALRGSLD-----IFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPG  358 (406)
T ss_pred             eCCccHHHHHHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCH
Confidence            34566555444333332     1112246888999999999999998764 211112111     12346766532 244


Q ss_pred             HHH-HHHHHhcceEEcCC--C--ceeccc-C-CcCCHHHHHHHHHhh
Q psy16707         88 TQV-EKLIKEHSVYLTKD--G--RISMAG-V-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv-~~L~~~~~IY~~~~--G--Rinvag-l-~~~ni~~va~ai~~v  127 (420)
                      +++ +.|. +++|++...  |  ||++.+ . +.++||+++++|.++
T Consensus       359 ~~~~~~L~-~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~  404 (406)
T TIGR01814       359 KAVFQALI-KRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEI  404 (406)
T ss_pred             HHHHHHHH-HCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHH
Confidence            554 5664 568987643  3  456533 3 679999999999764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=84.42  E-value=9.3  Score=38.45  Aligned_cols=92  Identities=16%  Similarity=0.271  Sum_probs=56.4

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HH-HHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-AT-QVEKLI   94 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~-qv~~L~   94 (420)
                      +++..+..++...|.+    ..|.+   .+++.++..|..|.+.|....    |    ...|+|.+.-+. .+ -++.| 
T Consensus       252 ~~~~~~~~~a~~~l~~----~~~~~---~~~~~~~~~r~~l~~~L~~~~----~----~~~g~f~~~~~~~~~~~~~~l-  315 (357)
T PRK14809        252 AASELACRAGLAALDD----DEHVE---RTVETARWAREYIREELDAPT----W----ESAGNFVLAEVGDASAVAEAA-  315 (357)
T ss_pred             CCCHHHHHHHHHHhCC----HHHHH---HHHHHHHHHHHHHHHHhcCcc----C----CCCCCEEEEECCCHHHHHHHH-
Confidence            3455667777788876    34544   445666677888888885421    2    467899888773 33 34455 


Q ss_pred             HhcceEEcCCC--------ceecccCCcCCHHHHHHHHHh
Q psy16707         95 KEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        95 ~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~  126 (420)
                      ++++|.+.+..        ||+++  +...++...++|.+
T Consensus       316 ~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~  353 (357)
T PRK14809        316 QERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNE  353 (357)
T ss_pred             HHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHH
Confidence            57799887532        44443  34555555555544

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=84.40  E-value=7.9  Score=38.30  Aligned_cols=78  Identities=17%  Similarity=0.337  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcC-------CC---
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG---  105 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~-------~G---  105 (420)
                      ++++.++++++..|+.|.+.|++.+    |... .+.|.|-..-+.    . +=.+.| .+++|++..       .|   
T Consensus       265 ~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~  338 (360)
T TIGR00858       265 QEEPWRREKLLALIARLRAGLEALG----FTLM-PSCTPIVPVIIGDNASALALAEEL-QQQGIFVGAIRPPTVPAGTSR  338 (360)
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHcC----CccC-CCCCCEEEEEeCCHHHHHHHHHHH-HHCCeeEeeeCCCCCCCCCce
Confidence            3456778999999999999998753    3333 344544433332    2 334555 567999952       22   


Q ss_pred             -ceeccc-CCcCCHHHHHHHH
Q psy16707        106 -RISMAG-VTSKNVGYLAKAI  124 (420)
Q Consensus       106 -Rinvag-l~~~ni~~va~ai  124 (420)
                       ||++.. .+.++++.++++|
T Consensus       339 iRis~~~~~~~~~i~~~l~~l  359 (360)
T TIGR00858       339 LRLTLSAAHTPGDIDRLAEAL  359 (360)
T ss_pred             EEEEEcCCCCHHHHHHHHHhh
Confidence             677776 4778888888876

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=84.37  E-value=8.2  Score=39.21  Aligned_cols=98  Identities=14%  Similarity=0.190  Sum_probs=62.0

Q ss_pred             chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHHHHHHHHhcc
Q psy16707         20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQVEKLIKEHS   98 (420)
Q Consensus        20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~qv~~L~~~~~   98 (420)
                      ..+..++..+|++.+    |.. +....++++..|+.|.+.|++++  + +..+..+.|+|.+.-+. .+++...-++++
T Consensus       253 ~~~~~~a~~~l~~~~----~~~-~~~~~~~~~~~r~~l~~~L~~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~l~~~g  324 (364)
T PRK04781        253 TPCAALAEQALSAPA----LAV-TARRVAEVRAERERLHAALAQLP--G-VRRVYPSQGNFLLVRFDDAEAAFQALLAAG  324 (364)
T ss_pred             HHHHHHHHHHHhccc----HHH-HHHHHHHHHHHHHHHHHHHHhCC--C-CCeECCCCCcEEEEEcCCHHHHHHHHHHCC
Confidence            334445666777653    222 22223367788999999998752  2 44456788999998774 344444445789


Q ss_pred             eEEcCC-------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         99 VYLTKD-------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        99 IY~~~~-------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      |.+.+.       +  ||+++  ++...+++.+||..+
T Consensus       325 I~v~~~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~  360 (364)
T PRK04781        325 VVVRDQRAAPRLSDALRITLG--TPEQNDRVLAALQRT  360 (364)
T ss_pred             eEEeeCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHH
Confidence            988542       2  45554  567888999998765

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=84.34  E-value=11  Score=39.07  Aligned_cols=106  Identities=12%  Similarity=0.092  Sum_probs=67.9

Q ss_pred             hccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC----CCc---eEEe-
Q psy16707        304 AFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIG---MFCY-  373 (420)
Q Consensus       304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~----q~G---mF~~-  373 (420)
                      .+..+||.++-+.....|     + ..++|  ++.+.+|.+++.+.+++.++++|.   ...+..    ++-   .|.+ 
T Consensus       235 ~t~~TP~v~~l~a~~~~l-----~-~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~---l~~~~~~~~~rS~tvt~v~~~  305 (374)
T TIGR01365       235 STINTPSMLCVEDWLDAL-----K-WAESIGGLKPLIARADDNLAVLEAFVAKNNW---IHFLAETPEIRSNTSVCLKVV  305 (374)
T ss_pred             CCCCChHHHHHHHHHHHH-----H-HHHHccCHHHHHHHHHHHHHHHHHHHHHCCC---cccCCCChhhcCCCeEEEEeC
Confidence            456677877776555433     1 11233  888889999999999999999983   122221    121   1222 


Q ss_pred             cC-C-----C-----HHHHHHHHHhCCeEEeCCC--------cEEEcc-cCCCCHHHHHHHHHHH
Q psy16707        374 TG-L-----N-----ATQVEKLIKEHSVYLTKDG--------RISMAG-VTSKNVGYLAKAIHAV  418 (420)
Q Consensus       374 ~~-l-----~-----~~~v~~Ll~e~~Vy~~p~g--------Ris~ag-l~~~ni~~la~AI~~v  418 (420)
                      .+ .     +     ...+...++++||.+.+|.        ||+--| ++.++|+.+..+|+=+
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~  370 (374)
T TIGR01365       306 DPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWA  370 (374)
T ss_pred             CccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence            12 3     1     3445545567799988752        887655 7888899998888643

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PLN02721 threonine aldolase

Probab=84.22  E-value=9.8  Score=37.73  Aligned_cols=73  Identities=14%  Similarity=0.258  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCCc-ccc-ccccceeec-C----C-CHHHHHHHHHhcceEEcCCC----ceecc-cCCcCCH
Q psy16707         51 ISMRQSLKDNLQKEGSNKPWN-HIT-DQIGMFCYT-G----L-NATQVEKLIKEHSVYLTKDG----RISMA-GVTSKNV  117 (420)
Q Consensus        51 ~~~R~~l~~~L~~~~~~~~w~-~i~-~Q~GmFs~~-g----L-~~~qv~~L~~~~~IY~~~~G----Rinva-gl~~~ni  117 (420)
                      ...++.|.+.|++...   |. .+. .+.+|+++. .    . +.+-+++|. +++|++.+.+    |++++ ..+.+++
T Consensus       264 ~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~lR~~~~~~~~~~~i  339 (353)
T PLN02721        264 HKKAKLLAEGLNQIKG---LRVNVAAVETNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGNSSRIRVVTHHQISDSDV  339 (353)
T ss_pred             HHHHHHHHHHHHhCCC---cEEecCCccceEEEEEccCCccccHHHHHHHHH-hCCcEEecCCCceEEEEecCcCCHHHH
Confidence            4567788888876521   21 122 234444432 1    2 334566775 7899987665    78886 7899999


Q ss_pred             HHHHHHHHhh
Q psy16707        118 GYLAKAIHAN  127 (420)
Q Consensus       118 ~~va~ai~~v  127 (420)
                      ++++++|.++
T Consensus       340 ~~~~~~l~~~  349 (353)
T PLN02721        340 QYTLSCFQQA  349 (353)
T ss_pred             HHHHHHHHHH
Confidence            9999999875

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=84.16  E-value=12  Score=37.46  Aligned_cols=93  Identities=18%  Similarity=0.294  Sum_probs=60.2

Q ss_pred             chHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccc--ceeecCC-CHHHHHHHHHh
Q psy16707         20 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG--MFCYTGL-NATQVEKLIKE   96 (420)
Q Consensus        20 ~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~G--mFs~~gL-~~~qv~~L~~~   96 (420)
                      .....++...|++++    |   ++.++++++..|..|.+.|++.+.       .-+.|  +|.+..+ +.+++...-.+
T Consensus       225 ~~~~~~~~~~L~~~~----~---~~~~~~~~~~~r~~l~~~L~~~~~-------~~~~~~~~f~~~~~~~~~~~~~~l~~  290 (330)
T PRK05664        225 GPTRWLAQAALADTP----W---QRRQRERLLAASQRLAALLRRHGL-------TPAGGCALFQWVRTEDAAALHEFLAR  290 (330)
T ss_pred             HHHHHHHHHHHhChH----H---HHHHHHHHHHHHHHHHHHHHHCCC-------cccCCcceEEEEecCCHHHHHHHHHH
Confidence            344567777887653    3   345788888889999999988642       12334  6666654 45556444467


Q ss_pred             cceEEcCC-----CceecccCCcCCHHHHHHHHHhh
Q psy16707         97 HSVYLTKD-----GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        97 ~~IY~~~~-----GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ++|.+..-     =||++++ +..+.+.+.+++..+
T Consensus       291 ~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~  325 (330)
T PRK05664        291 RGILTRLFEQPASLRFGLPA-DEADWARLDQALLAY  325 (330)
T ss_pred             CCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence            79988432     2556554 456688888888765

>PLN02672 methionine S-methyltransferase

Probab=84.05  E-value=8.6  Score=45.25  Aligned_cols=85  Identities=24%  Similarity=0.366  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---------------------CCCHHHH-HHHH
Q psy16707         37 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---------------------GLNATQV-EKLI   94 (420)
Q Consensus        37 ~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---------------------gL~~~qv-~~L~   94 (420)
                      ..|.+.++++++.+++-|+.+.+.|++.+    |..+.-+-|+|.+.                     +++.+++ +.|.
T Consensus       962 ~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LL 1037 (1082)
T PLN02672        962 SDLLDGVAEQKKILKSRAERLKETLEACG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAIL 1037 (1082)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHH
Confidence            35999999999999999999999998863    66667788999876                     2344444 4687


Q ss_pred             HhcceEEcCC------C--ceecccCCcCCHHHHHHHHHh
Q psy16707         95 KEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        95 ~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~  126 (420)
                      ++.+|.+.+.      |  |||++. ....++...+.|.+
T Consensus      1038 ee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~k 1076 (1082)
T PLN02672       1038 KSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIAR 1076 (1082)
T ss_pred             HcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence            8889988752      1  677763 55555555555544

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=83.90  E-value=7.2  Score=39.37  Aligned_cols=92  Identities=16%  Similarity=0.236  Sum_probs=58.0

Q ss_pred             HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-HHH-HHHHHHhcce
Q psy16707         22 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-ATQ-VEKLIKEHSV   99 (420)
Q Consensus        22 Ga~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-~~q-v~~L~~~~~I   99 (420)
                      ...++...|.+..     .+.++..++.++..|+.|.+.|++++.   |..+....|.|-+..+. .++ .++|. +++|
T Consensus       248 ~~~~a~~~L~~~~-----~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~~~ps~~nfi~~~~~~~~~l~~~L~-~~gi  318 (351)
T PRK01688        248 VADIAAQALSPQG-----IAAMRERVAEINANRQWLIAALKEIPC---VEQVFDSETNYILARFTASSAVFKSLW-DQGI  318 (351)
T ss_pred             HHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHHhCCC---CCeECCCCCcEEEEEcCCHHHHHHHHH-HCCe
Confidence            4555556666532     133455667778889999999987532   33345667888887664 333 44565 6788


Q ss_pred             EEcCC-------C--ceecccCCcCCHHHHHHHH
Q psy16707        100 YLTKD-------G--RISMAGVTSKNVGYLAKAI  124 (420)
Q Consensus       100 Y~~~~-------G--Rinvagl~~~ni~~va~ai  124 (420)
                      .+..-       |  ||++.  +...++.+.+||
T Consensus       319 ~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al  350 (351)
T PRK01688        319 ILRDQNKQPGLSNCLRITIG--TREECQRVIDAL  350 (351)
T ss_pred             EEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhh
Confidence            87532       2  56655  567788887776

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=83.79  E-value=4  Score=42.25  Aligned_cols=82  Identities=13%  Similarity=0.159  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCC-CccccccccceeecCCC------HHHHHHHHHhcceEEcCCC----ceeccc-C
Q psy16707         45 GMADRIISMRQSLKDNLQKEGSNKP-WNHITDQIGMFCYTGLN------ATQVEKLIKEHSVYLTKDG----RISMAG-V  112 (420)
Q Consensus        45 ~m~~Ri~~~R~~l~~~L~~~~~~~~-w~~i~~Q~GmFs~~gL~------~~qv~~L~~~~~IY~~~~G----Rinvag-l  112 (420)
                      .++++++.+++.|.+.|++++.... |.. .+..|++.-.-+.      ..++...-.+++|++...|    ||+.+- +
T Consensus       303 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~  381 (406)
T PRK12381        303 EMLNGVKQRHDWFVERLNTINARYGLFSE-IRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNI  381 (406)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCEEE-EecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccC
Confidence            4567777888888888877643222 222 2344665433332      2344333456799987544    456555 8


Q ss_pred             CcCCHHHHHHHHHhh
Q psy16707        113 TSKNVGYLAKAIHAN  127 (420)
Q Consensus       113 ~~~ni~~va~ai~~v  127 (420)
                      +..+|+.+.++|.++
T Consensus       382 t~~~i~~~~~~l~~~  396 (406)
T PRK12381        382 SEEEITTGLDRFARA  396 (406)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            889999998888765

>PRK02948 cysteine desulfurase; Provisional

Probab=83.71  E-value=9.8  Score=38.52  Aligned_cols=83  Identities=10%  Similarity=0.112  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----CCCccccccccc--eeecCCCHHHHH-HHHHhcceEEcC-----------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSN----KPWNHITDQIGM--FCYTGLNATQVE-KLIKEHSVYLTK-----------  103 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~----~~w~~i~~Q~Gm--Fs~~gL~~~qv~-~L~~~~~IY~~~-----------  103 (420)
                      +++.+++++...|..|.+.|++++..    +.-+++  ..++  |...+++.+++. .| ++++|++..           
T Consensus       254 ~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p  330 (381)
T PRK02948        254 NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSC--LPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGKQEP  330 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccC--cCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCCCCC
Confidence            46777899999999999999877531    001111  2234  344566666544 45 677999862           


Q ss_pred             --------------CC--ceecccC-CcCCHHHHHHHHHhh
Q psy16707        104 --------------DG--RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       104 --------------~G--Rinvagl-~~~ni~~va~ai~~v  127 (420)
                                    .+  ||++... +.++||.+.++|.++
T Consensus       331 ~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~  371 (381)
T PRK02948        331 SKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI  371 (381)
T ss_pred             CHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence                          12  5555444 557899999988876

>PLN02452 phosphoserine transaminase

Probab=83.65  E-value=8  Score=39.91  Aligned_cols=105  Identities=22%  Similarity=0.273  Sum_probs=70.1

Q ss_pred             hhccCCCchHHHHHHHHHhCChhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC--CCCceEE-ec-
Q psy16707        303 RAFYSSPPIHGARIVQEILGDPKLKAQWLT---EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT--DQIGMFC-YT-  374 (420)
Q Consensus       303 r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~---el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~--~q~GmF~-~~-  374 (420)
                      .+.+.+||.++.......|       +|..   -++.+.+|.++..+.+++.|++. |.-..  ...  .++.|-. |. 
T Consensus       237 ~s~~~TP~v~~i~~l~~aL-------~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~--~~~~~~rs~~~vsF~~  307 (365)
T PLN02452        237 DSLYNTPPCFGIYMCGLVF-------EDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVC--PVEKSVRSLMNVPFTL  307 (365)
T ss_pred             CCccCChhHHHHHHHHHHH-------HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC--CCChHHhCCeEEEEEc
Confidence            3677799999888776644       3443   27888999999999999999984 54111  111  1344333 32 


Q ss_pred             ---CCCHHHHHHHHHhCCeEEeCC-----C-cEEEc-ccCCCCHHHHHHHHHH
Q psy16707        375 ---GLNATQVEKLIKEHSVYLTKD-----G-RISMA-GVTSKNVGYLAKAIHA  417 (420)
Q Consensus       375 ---~l~~~~v~~Ll~e~~Vy~~p~-----g-Ris~a-gl~~~ni~~la~AI~~  417 (420)
                         .+..+|++.+ ++.|+...||     | |+|+- +++.+.++.|++.+++
T Consensus       308 ~~~~~~~~f~~~~-~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~  359 (365)
T PLN02452        308 GGSELEAEFVKEA-AKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD  359 (365)
T ss_pred             CCchhHHHHHHHH-HHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHH
Confidence               2334566666 7999999886     2 77643 4577788888888775

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=83.62  E-value=4.8  Score=41.29  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee-cCC---CHHHHHHHHHhcceEEcC-------C--C--cee
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-TGL---NATQVEKLIKEHSVYLTK-------D--G--RIS  108 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~-~gL---~~~qv~~L~~~~~IY~~~-------~--G--Rin  108 (420)
                      ..++++...+++.|.+.|++.+    |..+..+.+|+.+ +|-   ..+-.+.|.++++|++..       .  +  ||+
T Consensus       298 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis  373 (402)
T TIGR01821       298 QDLRRAHQENVKRLKNLLEALG----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRIT  373 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEE
Confidence            4455666778888888887764    4444444444333 232   123334566778999853       1  2  455


Q ss_pred             cc-cCCcCCHHHHHHHHHhh
Q psy16707        109 MA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       109 va-gl~~~ni~~va~ai~~v  127 (420)
                      +. ..+.++|+++++++.++
T Consensus       374 ~~~~~t~edi~~~~~~l~~~  393 (402)
T TIGR01821       374 PTPAHTDKMIDDLVEALLLV  393 (402)
T ss_pred             eCCCCCHHHHHHHHHHHHHH
Confidence            43 46778999999999887

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=83.61  E-value=3.7  Score=42.89  Aligned_cols=40  Identities=13%  Similarity=0.087  Sum_probs=29.8

Q ss_pred             HHHHHHHhCCeEEeCCC------cEEE-cccCCCCHHHHHHHHHHHh
Q psy16707        380 QVEKLIKEHSVYLTKDG------RISM-AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       380 ~v~~Ll~e~~Vy~~p~g------Ris~-agl~~~ni~~la~AI~~vv  419 (420)
                      .+...+.++||++.+.|      ||+. ..++.++|+++.+++.+++
T Consensus       381 ~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l  427 (433)
T PRK08117        381 KILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEAL  427 (433)
T ss_pred             HHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence            34344468899987632      7885 4589999999999998875

>PRK06460 hypothetical protein; Provisional

Probab=83.56  E-value=1.5  Score=45.11  Aligned_cols=69  Identities=22%  Similarity=0.234  Sum_probs=45.8

Q ss_pred             CCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707        197 KEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG  274 (420)
Q Consensus       197 ~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~  274 (420)
                      +.|.  ......+|+++++++.-++.      .                        +.+.+|+.|+..++..+  +.| 
T Consensus        37 ~~y~r~~~p~~~~L~~~lA~l~g~~~------~------------------------v~~~sG~~ai~~~l~al--~~~-   83 (376)
T PRK06460         37 YRYSREANPTVLELTKKIVELENAEM------G------------------------VAFSSGMGAISTTALAL--LKP-   83 (376)
T ss_pred             cceeCCCCccHHHHHHHHHHHhCCCc------E------------------------EEeCCHHHHHHHHHHHH--hCC-
Confidence            4454  34567889999998763321      1                        45678888888876544  457 


Q ss_pred             CCEEEEcCCCCC----CcHHHHhhcCcc
Q psy16707        275 EKVIYVPTPTWG----NHIPICKHTGLE  298 (420)
Q Consensus       275 gd~VlvpdP~w~----ny~~i~~~aG~~  298 (420)
                      ||.|++++|.|+    .|...++..|++
T Consensus        84 Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~  111 (376)
T PRK06460         84 GNSVLVHRDMFGRSYRFFTDYLKNWGVN  111 (376)
T ss_pred             CCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence            999999987663    344555666654

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=83.54  E-value=10  Score=40.61  Aligned_cols=81  Identities=14%  Similarity=0.257  Sum_probs=53.9

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------   86 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------   86 (420)
                      .+++..+..++...|.+.+....|..+..    ++...|..+++.|++.  +| +....-|-|||.+.-+.         
T Consensus       389 ~~~~~~~q~a~~~aL~~~~~~~~~~~~~~----~~~~~r~~l~~~L~~~--~g-~~~~~p~g~fy~~~~l~~~~~~~~~~  461 (517)
T PRK13355        389 LCSNVPAQSIVQTALGGHQSVKDYLVPGG----RVYEQRELVYNALNAI--PG-ISAVKPKAAFYIFPKIDVKKFNIHDD  461 (517)
T ss_pred             CCcChHHHHHHHHHhcCCccHHHHHHHHH----HHHHHHHHHHHHHhcC--CC-cccCCCCeeeEEEeecCcccCCCCCH
Confidence            45666677778888876554455665543    3344588899999765  23 66677889999986542         


Q ss_pred             HHHHHHHHHhcceEEcC
Q psy16707         87 ATQVEKLIKEHSVYLTK  103 (420)
Q Consensus        87 ~~qv~~L~~~~~IY~~~  103 (420)
                      .+-+..|-++++|-+.+
T Consensus       462 ~~~~~~ll~~~gV~v~p  478 (517)
T PRK13355        462 EQFALDLLHDKKVLIVQ  478 (517)
T ss_pred             HHHHHHHHHhCCEEEeC
Confidence            24455666778887764

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=83.01  E-value=6.3  Score=39.52  Aligned_cols=78  Identities=18%  Similarity=0.313  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcC-------CC----ce
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG----RI  107 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~-------~G----Ri  107 (420)
                      +.+++++...|+.|.+.|++.+    +..+..+.+|+++. +.    . +=++.|+ +++|.+..       .|    ||
T Consensus       290 ~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~lRi  363 (385)
T PRK05958        290 PERRERLAALIARLRAGLRALG----FQLMDSQSAIQPLI-VGDNERALALAAALQ-EQGFWVGAIRPPTVPAGTSRLRI  363 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEEE-eCCHHHHHHHHHHHH-HCCceEecccCCCCCCCCceEEE
Confidence            4567889999999999998764    34344455555543 32    2 3355664 56999963       12    67


Q ss_pred             eccc-CCcCCHHHHHHHHHhh
Q psy16707        108 SMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       108 nvag-l~~~ni~~va~ai~~v  127 (420)
                      +++. .+..+++.++++|.++
T Consensus       364 s~~~~~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        364 TLTAAHTEADIDRLLEALAEA  384 (385)
T ss_pred             EecCCCCHHHHHHHHHHHHhc
Confidence            7764 5889999999998764

>PLN02368 alanine transaminase

Probab=82.94  E-value=6.4  Score=41.08  Aligned_cols=75  Identities=17%  Similarity=0.265  Sum_probs=58.2

Q ss_pred             CCCccchHHHHHHHHhCChhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee--cCCCHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKL----KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLNAT   88 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L----~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~--~gL~~~   88 (420)
                      ..+++..+-.++...|++++.    .+.|.+|++.|++..+.-|..+++.|.+.  + .|+...-|-|||.|  ..|.+.
T Consensus       324 ~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~--~-g~~~~~P~Gafy~~~~i~lp~~  400 (407)
T PLN02368        324 ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC--K-NVVCNFTEGAMYSFPQIKLPPK  400 (407)
T ss_pred             cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--C-CeEeCCCCeeeEeccCCCCCHH
Confidence            345777777788888987642    24689999999999999999999999875  2 26667778999999  488887


Q ss_pred             HHHH
Q psy16707         89 QVEK   92 (420)
Q Consensus        89 qv~~   92 (420)
                      -++.
T Consensus       401 ~~~~  404 (407)
T PLN02368        401 AIEA  404 (407)
T ss_pred             HHHH
Confidence            7664

>PRK07568 aspartate aminotransferase; Provisional

Probab=82.62  E-value=13  Score=37.74  Aligned_cols=78  Identities=17%  Similarity=0.216  Sum_probs=51.4

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHH-HHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQ-VEK   92 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~q-v~~   92 (420)
                      ++|.....++..+|+++   ..|   ++.++++++..|..+.+.|++..  + +....-+-|+|.+.-|.   .++ ++.
T Consensus       267 ~~s~~~q~~~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~  337 (397)
T PRK07568        267 SPPTLEQIGAAALLDTP---ESY---FDEVREEYKKRRDILYEELNKIP--G-VVCEKPKGAFYIIAKLPVDDAEDFAKW  337 (397)
T ss_pred             CCCcHHHHHHHHHhhCC---HHH---HHHHHHHHHHHHHHHHHHHhcCC--C-ceecCCCcceEEEEecCCCCHHHHHHH
Confidence            55666788888888764   234   55577788888999999997652  2 44444567788776663   333 455


Q ss_pred             HHHh-----cceEEcC
Q psy16707         93 LIKE-----HSVYLTK  103 (420)
Q Consensus        93 L~~~-----~~IY~~~  103 (420)
                      |.++     ++|.+.+
T Consensus       338 l~~~~~~~~~gv~v~p  353 (397)
T PRK07568        338 LLTDFNYNGETVMVAP  353 (397)
T ss_pred             HHhhcccccceEEEeC
Confidence            6554     5676654

>PLN00144 acetylornithine transaminase

Probab=82.24  E-value=5.4  Score=41.13  Aligned_cols=103  Identities=11%  Similarity=0.242  Sum_probs=60.9

Q ss_pred             ccCCCccchHHHHHH---HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CH
Q psy16707         13 AFYSSPPIHGARIVQ---EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NA   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~---~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~   87 (420)
                      .+|+.+|.- +.++.   .++.+++    +.+.++.|.+++   |+.|.+.+.++.   ....+. ..|+|..+-|  +.
T Consensus       264 ~T~~~~pl~-~aaa~a~l~~i~~~~----~~~~~~~~g~~l---~~~l~~~~~~~~---~~~~vr-g~G~~~~l~l~~~~  331 (382)
T PLN00144        264 STFAGGPLV-CNAALAVLDKISKPG----FLASVAKKGEYL---RELLRRKLGGNP---HVKEVR-GVGLLVGIQLDVPA  331 (382)
T ss_pred             CCCCCCHHH-HHHHHHHHHHHhhch----HHHHHHHHHHHH---HHHHHHHHhhCC---Cceeee-cCceEEEEEecCcc
Confidence            356666655 44555   3444433    344555555554   444444444431   122322 4888877755  23


Q ss_pred             HHHHHHHHhcceEEcCCCc-----eeccc-CCcCCHHHHHHHHHhh
Q psy16707         88 TQVEKLIKEHSVYLTKDGR-----ISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv~~L~~~~~IY~~~~GR-----invag-l~~~ni~~va~ai~~v  127 (420)
                      +++...-.+.+|.+.+.|+     ++.+. ++..+++...+.+.++
T Consensus       332 ~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~  377 (382)
T PLN00144        332 GPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADC  377 (382)
T ss_pred             HHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence            4444444578999887663     77888 8889999888888776

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=82.23  E-value=11  Score=39.31  Aligned_cols=79  Identities=19%  Similarity=0.347  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEE-ecCCCH---HHHHHHHHhCCeEEeC-------CC----cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFC-YTGLNA---TQVEKLIKEHSVYLTK-------DG----RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~-~~~l~~---~~v~~Ll~e~~Vy~~p-------~g----Ris  399 (420)
                      ...++++++.-..+...++..|.+    .........- .+|.+.   +..+.|+++ |||+.+       -|    ||+
T Consensus       293 ~~~r~~L~~~~~~~~~~~~~~~~~----~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~  367 (388)
T COG0156         293 PERRERLQELAAFFRSLLKALGLV----LLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRIT  367 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCc----cCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEE
Confidence            344466666655565566666633    2222233222 245432   445778777 999954       23    888


Q ss_pred             Eccc-CCCCHHHHHHHHHHH
Q psy16707        400 MAGV-TSKNVGYLAKAIHAV  418 (420)
Q Consensus       400 ~agl-~~~ni~~la~AI~~v  418 (420)
                      ++.. +++.|+.+++++.++
T Consensus       368 lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         368 LTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             ecCCCCHHHHHHHHHHHHhh
Confidence            8755 778899999999875

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=81.77  E-value=9.8  Score=38.24  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccc-eeec--C---CCHHH-HHHHHHhcceEEcCCC-------
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGM-FCYT--G---LNATQ-VEKLIKEHSVYLTKDG-------  105 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~Gm-Fs~~--g---L~~~q-v~~L~~~~~IY~~~~G-------  105 (420)
                      ++.+++|++..|..|.+.|++.|    |..+..   +.++ .++.  .   .+... .+.|+ +++|.+.+..       
T Consensus       262 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~gi~v~~g~~~~~~~i  336 (363)
T TIGR02326       262 VAARHQRYQQNQKTLVAGMRALG----FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK-EQGFVIYPGKVSQVDCF  336 (363)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHH-HCCEEEECCcCCCCCEE
Confidence            55678999999999999998764    333221   3343 2333  2   33344 45665 5588885442       


Q ss_pred             ceec-ccCCcCCHHHHHHHHHhh
Q psy16707        106 RISM-AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 Rinv-agl~~~ni~~va~ai~~v  127 (420)
                      ||+. .-.+..+++.++++|.++
T Consensus       337 Ri~~~~~~~~edv~~~l~~l~~~  359 (363)
T TIGR02326       337 RIGNIGEVDAADITRLLTAIGKA  359 (363)
T ss_pred             EEecCCCCCHHHHHHHHHHHHHH
Confidence            8875 446788999999998876

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=81.76  E-value=14  Score=37.57  Aligned_cols=96  Identities=17%  Similarity=0.219  Sum_probs=62.3

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L   93 (420)
                      +++......+...|.++    .|.++   .++.++..|..|.+.|++.+    |. +....|+|-+..+.   .+-++.|
T Consensus       262 ~~~~~~q~~~~~~l~~~----~~~~~---~~~~~~~~r~~l~~~L~~~g----~~-~~p~~g~fl~~~~~~~~~~l~~~l  329 (371)
T PRK05166        262 NVNGAAQAAALAALDDE----EHLAK---GVALALAERERLKKELAEMG----YR-IAPSRANFLFFDARRPASAVAEAL  329 (371)
T ss_pred             CCCHHHHHHHHHHhcCH----HHHHH---HHHHHHHHHHHHHHHHHHCc----Ce-eCCCcCCEEEEeCCCCHHHHHHHH
Confidence            45555556677777764    45443   34566677888888888763    43 34567898887653   3345566


Q ss_pred             HHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      . +++|.+.+..        ||+++.  +...+.+.+++..+
T Consensus       330 ~-~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i  368 (371)
T PRK05166        330 L-RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKV  368 (371)
T ss_pred             H-HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHH
Confidence            5 4699886421        677663  45688999988775

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=81.63  E-value=2.8  Score=43.53  Aligned_cols=34  Identities=26%  Similarity=0.423  Sum_probs=28.7

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +.+.||++|+.+++..+  +.| ||.|++++|+|+..
T Consensus        72 vvt~gg~~Ai~~~l~al--l~~-Gd~Il~~~~~y~~~  105 (388)
T PRK08861         72 VVTNCGTSALNLWVSAL--LGP-DDLIVAPHDCYGGT  105 (388)
T ss_pred             EEECCHHHHHHHHHHHH--cCC-CCEEEEcCCchHHH
Confidence            67999999999988644  457 99999999999953

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=81.55  E-value=16  Score=37.38  Aligned_cols=85  Identities=16%  Similarity=0.095  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCC-ceEEec-C-----CCHHHHHHHHHhCCeEEeC-------C-Cc
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQI-GMFCYT-G-----LNATQVEKLIKEHSVYLTK-------D-GR  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~-GmF~~~-~-----l~~~~v~~Ll~e~~Vy~~p-------~-gR  397 (420)
                      ++.+.+|.++..+.+++.|++.+.-..+..-. .++ +++.+. +     .+.+.+.+|+++ +|.+..       + -|
T Consensus       270 ~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vR  348 (378)
T PRK03080        270 LDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLR  348 (378)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEE
Confidence            57777888999999999999886311111001 123 355542 2     234566777654 777642       2 29


Q ss_pred             EEEccc-CCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl-~~~ni~~la~AI~~vv  419 (420)
                      ||+-+- +.++|+++.++|.+++
T Consensus       349 is~~~~~t~~di~~l~~al~~~~  371 (378)
T PRK03080        349 IWCGPTVEPADVEALTPWLDWAF  371 (378)
T ss_pred             EecCCCCCHHHHHHHHHHHHHHH
Confidence            997765 5678999999998864

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=81.48  E-value=8.3  Score=38.47  Aligned_cols=81  Identities=17%  Similarity=0.263  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceeec----CCCH-HHHHHHHHhcceEEcCC------C--c
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYT----GLNA-TQVEKLIKEHSVYLTKD------G--R  106 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~~----gL~~-~qv~~L~~~~~IY~~~~------G--R  106 (420)
                      ++.+.++...+++.|.+.|++.+    |..+..   ..+++.+.    +.+. +-++.|.++|+|++...      +  |
T Consensus       257 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iR  332 (356)
T cd06451         257 LENRWARHRRLAKALREGLEALG----LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFR  332 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEE
Confidence            45567788888888899888753    333321   23454433    3333 45567877779998631      2  6


Q ss_pred             eecccC-CcCCHHHHHHHHHhh
Q psy16707        107 ISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       107 invagl-~~~ni~~va~ai~~v  127 (420)
                      ++++.. +..+|+++.+++.++
T Consensus       333 is~~~~~~~e~v~~~~~~l~~~  354 (356)
T cd06451         333 IGHMGEATREDVLGVLSALEEA  354 (356)
T ss_pred             EecCCCCCHHHHHHHHHHHHHH
Confidence            676655 579999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=81.07  E-value=5.7  Score=42.31  Aligned_cols=92  Identities=13%  Similarity=0.051  Sum_probs=58.8

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCC---CC--CHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI---IG--APDFGKLAAQLAYGEDCPQLKDNLISIVQGI  235 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~---~G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~  235 (420)
                      .+||.+--.|.++-|..+.++.|.+|.........+.+|.-.   .|  ...+++.++++. |...         +    
T Consensus        75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~-gae~---------a----  140 (454)
T TIGR00474        75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT-GAED---------A----  140 (454)
T ss_pred             ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh-CCCc---------E----
Confidence            456765446677777778888888888776643223333211   12  267777787765 4321         1    


Q ss_pred             CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707        236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG  286 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~  286 (420)
                                      +.+.+|+.|+.+++..   +.+ ||+|++++-.++
T Consensus       141 ----------------lvv~sg~aAi~l~l~~---l~~-GdeVIvs~~e~v  171 (454)
T TIGR00474       141 ----------------LVVNNNAAAVLLALNT---LAK-GKEVIVSRGELV  171 (454)
T ss_pred             ----------------EEECCHHHHHHHHHHH---hCC-cCEEEECCChhh
Confidence                            4577899898877754   346 999999987643

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=81.02  E-value=3.4  Score=42.90  Aligned_cols=38  Identities=8%  Similarity=0.093  Sum_probs=28.8

Q ss_pred             ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707        253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK  293 (420)
Q Consensus       253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~  293 (420)
                      .+.+|+.|+..+..  ..+.| ||.|++++|.|+.+...++
T Consensus        85 ~~~sG~~Ai~~~l~--~~l~~-Gd~Vl~~~~~y~~~~~~~~  122 (398)
T PRK07504         85 ATASGMAAVTAAIL--CQVKA-GDHVVAARALFGSCRYVVE  122 (398)
T ss_pred             EecCHHHHHHHHHH--HHhCC-CCEEEEcCCchhHHHHHHH
Confidence            47799999876553  23557 9999999999998765543

>PRK07671 cystathionine beta-lyase; Provisional

Probab=80.65  E-value=3.5  Score=42.46  Aligned_cols=35  Identities=11%  Similarity=0.104  Sum_probs=26.3

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC-CcHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG-NHIP  290 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~-ny~~  290 (420)
                      +.+.+|++++..+..+   +.| ||.|++++|+|+ .|..
T Consensus        69 ~~~~sG~aai~~~~~~---l~~-Gd~Viv~~~~y~~~~~~  104 (377)
T PRK07671         69 FAFGSGMAAITAVMML---FSS-GDHVILTDDVYGGTYRV  104 (377)
T ss_pred             EEeCCHHHHHHHHHHH---hCC-CCEEEECCCccchHHHH
Confidence            4577888888766543   447 999999999999 5543

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=80.60  E-value=1.1e+02  Score=35.74  Aligned_cols=221  Identities=15%  Similarity=0.165  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHhcceEEcC--CC--ceecccCCc-C
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK--DG--RISMAGVTS-K  115 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~~~IY~~~--~G--Rinvagl~~-~  115 (420)
                      +-|+++.+|+..+-..|.+.|++.|-.--++..- ...-+.+-+-+.+++..--.+.+|.+-.  ++  ++++--.|+ .
T Consensus       338 ~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF-~~~~v~~~~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~  416 (939)
T TIGR00461       338 KGLKNIARRIHSLTSILANGLENDPHELINKTWF-DTLTVKVGNGISSELLKAAEEFNINLRAVDTTTVGIALDETTTKA  416 (939)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcc-ceEEEEeCCCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHH
Confidence            4488899999999999999998866332221100 1111122123445554444666776642  23  355555444 5


Q ss_pred             CHHHHHHHHHhhC--C-------------CcccchhhhccccCCChH-------HHH----HHHHHccCCCCceeecccc
Q psy16707        116 NVGYLAKAIHANG--S-------------LPIRFQDARTSSVKVPSS-------NLL----TEAFKKDTNVNKINLGVGA  169 (420)
Q Consensus       116 ni~~va~ai~~v~--~-------------~p~~~~~~~~~~~~~d~i-------~~l----~~~~~~d~~~~kInL~iG~  169 (420)
                      +|+.+++++....  .             +|-.+. | .+...-.|+       ..+    ....++|...+..-++.|.
T Consensus       417 di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-r-~~~~~~~~~f~~~~sE~e~~r~~~~L~~kn~~~~~~fi~lGs  494 (939)
T TIGR00461       417 DVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQ-R-TDEILRNEVFNMYHSETEMLRYLHRLESKDLALNNSMIPLGS  494 (939)
T ss_pred             HHHHHHHHhcCCCccccchhhhhhhhcccCchhhh-c-cCcccCCcccccCCCHHHHHHHHHHHHhcCCCccccCCCCcc
Confidence            6999998885221  0             221111 1 222222233       223    3334444444557888898


Q ss_pred             cccCCCCCCchHHHHHHHHHHHccCCCCCCCCC---CCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCcccc
Q psy16707        170 YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI---IGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRV  243 (420)
Q Consensus       170 y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~---~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~  243 (420)
                      |.     -...+.|........+-...|-|.|-   .|.-+.-...++|+   .|-+.        ++            
T Consensus       495 ct-----mk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~--------~S------------  549 (939)
T TIGR00461       495 CT-----MKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDA--------IS------------  549 (939)
T ss_pred             CC-----CccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC--------cc------------
Confidence            73     34445554432221111224556654   34444444444444   55441        33            


Q ss_pred             ccccccceeecccchHHHHHHHHHHHhc------CCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        244 GAAFQISIVQGISGTGSLRVGAAFLKNF------FPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       244 ~~~~~~~~vqt~gGtgal~~~~~~l~~~------~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                              +|..||+.+-..++..+..+      .. -++|++|+-.-+....-++.+|++
T Consensus       550 --------l~p~aGA~gE~agL~aiR~y~~~rge~~-R~~vlip~saHgtnPasa~~~G~~  601 (939)
T TIGR00461       550 --------LQPNSGAQGEYAGLRVIRSYHESRGENH-RNICLIPVSAHGTNPASAAMAGMQ  601 (939)
T ss_pred             --------cCCchHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEEccccCcCHHHHHHCCCE
Confidence                    67888885443322222211      12 368999887664444446777775

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=80.54  E-value=17  Score=37.00  Aligned_cols=107  Identities=8%  Similarity=0.070  Sum_probs=66.1

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHH
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQV   90 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv   90 (420)
                      +..| +++......+...|.+    .+|.+++..+   ++..|+.+.+.|++.+    +.... ..|.|-+.-+ ..+++
T Consensus       248 ~~~~-~~~~~~q~aa~~~l~~----~~~~~~~~~~---~~~~r~~~~~~l~~~g----~~~~~-~~~nf~~~~~~~~~~~  314 (366)
T PRK01533        248 RLPF-NVSSLAQKAATIAFGD----DEFIEEIVRV---NTEGLRQYESFCKENE----IPFYQ-SQTNFIFLPVENGGEI  314 (366)
T ss_pred             cCCC-CcCHHHHHHHHHHhCC----HHHHHHHHHH---HHHHHHHHHHHHHhCC----CccCC-CcCcEEEEeCCCHHHH
Confidence            4444 4566677888888876    4677666443   3444555666666554    33333 3577777765 44444


Q ss_pred             HHHHHhcceEEcCC---CceecccCCcCCHHHHHHHHHhhCCCccc
Q psy16707         91 EKLIKEHSVYLTKD---GRISMAGVTSKNVGYLAKAIHANGSLPIR  133 (420)
Q Consensus        91 ~~L~~~~~IY~~~~---GRinvagl~~~ni~~va~ai~~v~~~p~~  133 (420)
                      ...-.+++|.+.+-   =||+++.-  ...+++.+|+.++.....+
T Consensus       315 ~~~l~~~GI~Vr~~~~~iRis~~~~--~~~~~l~~al~~~~~~~~~  358 (366)
T PRK01533        315 YEACAHAGFIIRPFPNGVRITVGTR--EQNEGVISVLQQHFENKKR  358 (366)
T ss_pred             HHHHHHCCcEEccCCCceEEeCCCH--HHHHHHHHHHHHHHHhccc
Confidence            44334788888532   27776655  7788999999988544433

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=80.49  E-value=18  Score=37.33  Aligned_cols=86  Identities=21%  Similarity=0.217  Sum_probs=51.9

Q ss_pred             ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------H-
Q psy16707         18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------A-   87 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------~-   87 (420)
                      ++.....++..+|.+.  ...|.++   ++++++..|+.+.+.|++.+  +.+-...-+-|||.+.-++         . 
T Consensus       282 ~~~~~q~a~~~~l~~~--~~~~~~~---~~~~~~~~~~~~~~~L~~~~--~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~  354 (409)
T PLN00143        282 PPTFIQAAIPEILEKT--TEDFFSK---TINILRAALAFCYDKLKEIP--CIMCPQKAEGAFFALVKLNLLLLEDIEDDM  354 (409)
T ss_pred             CCchHHHHHHHHHhcC--hHHHHHH---HHHHHHHHHHHHHHHHhcCC--CCCCCCCCCeeEEEEEecchhhcCCCCCHH
Confidence            3444556667777642  1345444   45666667777888887643  2111123467999998774         2 


Q ss_pred             HHHHHHHHhcceEEcCCC--------ceecc
Q psy16707         88 TQVEKLIKEHSVYLTKDG--------RISMA  110 (420)
Q Consensus        88 ~qv~~L~~~~~IY~~~~G--------Rinva  110 (420)
                      +-+..|-++++|.+.+..        |||++
T Consensus       355 ~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~  385 (409)
T PLN00143        355 EFCLKLAKEESLIILPGVTVGLKNWLRITFA  385 (409)
T ss_pred             HHHHHHHHhCCEEEeCccccCCCCeEEEEEc
Confidence            334567678899887643        67765

>PRK08064 cystathionine beta-lyase; Provisional

Probab=80.44  E-value=3.9  Score=42.27  Aligned_cols=34  Identities=9%  Similarity=0.173  Sum_probs=26.0

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      +.+.+|+.|+.++..+   +.| ||.|++++|.|+...
T Consensus        73 v~~~sG~~ai~~~l~~---l~~-Gd~Vlv~~~~y~~~~  106 (390)
T PRK08064         73 FAFASGMAAISTAFLL---LSK-GDHVLISEDVYGGTY  106 (390)
T ss_pred             EEECCHHHHHHHHHHH---hCC-CCEEEEccCccchHH
Confidence            4578889998877653   347 999999999998433

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=80.22  E-value=6.2  Score=41.56  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=32.1

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~  298 (420)
                      +.+.||+.|+..++..+  +.| ||.|++++|.|+.-..    +++..|++
T Consensus        83 l~~~sG~~Ai~~al~~l--l~~-GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~  130 (431)
T PRK08248         83 LAVSSGQAAITYSILNI--ASA-GDEIVSSSSLYGGTYNLFAHTLPKLGIT  130 (431)
T ss_pred             EEECCHHHHHHHHHHHH--hCC-CCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence            67999999999887533  457 9999999999975333    33445654

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=80.06  E-value=5  Score=42.41  Aligned_cols=80  Identities=20%  Similarity=0.178  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH------------HH-HHHHHHhcceEEcCCCceecc
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------------TQ-VEKLIKEHSVYLTKDGRISMA  110 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~------------~q-v~~L~~~~~IY~~~~GRinva  110 (420)
                      +.+++|+. .|+.|.+.|++.|    |..+.-+-|+|.|.-..+            .. +..|-++.+|..+..|.++..
T Consensus       291 ~~l~~~~~-~r~~l~~~L~~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~  365 (431)
T cd00617         291 DYLRHRVE-QVRYLGDRLDEAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAG  365 (431)
T ss_pred             HHHHHHHH-HHHHHHHHHHHCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecc
Confidence            44566655 4588999998876    555666788888875432            11 447889999999887775332


Q ss_pred             -----------------------cCCcCCHHHHHHHHHhhC
Q psy16707        111 -----------------------GVTSKNVGYLAKAIHANG  128 (420)
Q Consensus       111 -----------------------gl~~~ni~~va~ai~~v~  128 (420)
                                             +.+.+.+||||++|.++-
T Consensus       366 ~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~  406 (431)
T cd00617         366 RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY  406 (431)
T ss_pred             cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHH
Confidence                                   566788899999988873

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	420
3hlm_A	401	Crystal Structure Of Mouse Mitochondrial Aspartate		9e-46
3pd6_A	401	Crystal Structure Of Mouse Mitochondrial Aspartate		1e-45
7aat_A	401	X-Ray Structure Refinement And Comparison Of Three		6e-45
1aka_A	401	Structural Basis For The Catalytic Activity Of Aspa		7e-45
1aat_A	411	Oxoglutarate-Induced Conformational Changes In Cyto		1e-32
2cst_A	411	Crystal Structure Of The Closed Form Of Chicken Cyt		1e-32
1ajr_A	412	Refinement And Comparison Of The Crystal Structures		3e-31
1ajs_A	412	Refinement And Comparison Of The Crystal Structures		3e-31
3ii0_A	422	Crystal Structure Of Human Glutamate Oxaloacetate T		2e-30
4eu1_A	409	Structure Of A Mitochondrial Aspartate Aminotransfe		5e-27
1yaa_A	412	Aspartate Aminotransferase From Saccharomyces Cerev		4e-25
3tat_A	397	Tyrosine Aminotransferase From E. Coli Length = 397		2e-24
3fsl_A	397	Crystal Structure Of Tyrosine Aminotransferase Trip		2e-24
4f4e_A	420	Crystal Structure Of Aromatic-Amino-Acid Aminotrans		3e-23
4eff_A	420	Crystal Structure Of Aromatic-Amino-Acid Aminotrans		3e-23
1toj_A	396	Hydrocinnamic Acid-Bound Structure Of Srhept Mutant		1e-22
4f5i_A	406	Substrate Specificity Conversion Of E. Coli Pyridox		2e-22
1ahy_A	396	Aspartate Aminotransferase Hexamutant Length = 396		2e-22
4f5k_A	406	Substrate Specificity Conversion Of Aspartate Amino		4e-22
4f5f_A	406	Structure Of Aspartate Aminotransferase Conversion		5e-22
1ari_A	396	Aspartate Aminotransferase, W140h Mutant, Maleate C		5e-22
1g4v_A	396	Aspartate Aminotransferase Active Site Mutant N194a		5e-22
1b4x_A	396	Aspartate Aminotransferase From E. Coli, C191s Muta		5e-22
1asf_A	396	The Structural Basis For The Reduced Activity Of Th		5e-22
1qir_A	396	Aspartate Aminotransferase From Escherichia Coli, C		6e-22
1qis_A	396	Aspartate Aminotransferase From Escherichia Coli, C		6e-22
1tog_A	396	Hydrocinnamic Acid-Bound Structure Of Srhept + A293		6e-22
1asb_A	396	The Structural Basis For The Reduced Activity Of Th		6e-22
1asl_A	396	Crystal Structures Of Escherichia Coli Aspartate Am		6e-22
1ix8_A	396	Aspartate Aminotransferase Active Site Mutant V39fN		6e-22
2aat_A	396	2.8-Angstroms-Resolution Crystal Structure Of An Ac		6e-22
1ix6_A	396	Aspartate Aminotransferase Active Site Mutant V39f		6e-22
4f5h_A	406	Intercoversion Of Substrate Specificity: E. Coli As		6e-22
4f5m_A	406	Wild-type E. Coli Aspartate Aminotransferase: A Tem		6e-22
1bqa_A	396	Aspartate Aminotransferase P195a Mutant Length = 39		6e-22
1bqd_A	396	Aspartate Aminotransferase P138aP195A DOUBLE MUTANT		6e-22
2q7w_A	396	Structural Studies Reveals The Inactivation Of E. C		6e-22
4f5j_A	406	Rational Design And Directed Evolution For Conversi		7e-22
2d61_A	396	Aspartate Aminotransferase Mutant Ma With Maleic Ac		7e-22
1qit_A	396	Aspartate Aminotransferase From Escherichia Coli, C		7e-22
1aia_A	396	Structural Basis For The Catalytic Activity Of Aspa		7e-22
4f5g_A	406	Rational Design And Directed Evolution Of E. Coli A		7e-22
2d66_A	396	Aspartate Aminotransferase Mutant Mab Length = 396		8e-22
1toe_A	396	Unliganded Structure Of Hexamutant + A293d Mutant O		1e-21
1czc_A	396	Aspartate Aminotransferase Mutant Atb17139S142N WIT		2e-21
1yoo_A	396	Aspartate Aminotransferase Mutant Atb17 With Isoval		2e-21
1arh_A	396	Aspartate Aminotransferase, Y225rR386A MUTANT Lengt		4e-21
1aam_A	396	The Structural Basis For The Altered Substrate Spec		4e-21
3zzj_A	396	Structure Of An Engineered Aspartate Aminotransfera		4e-21
1g7w_A	396	Aspartate Aminotransferase Active Site Mutant N194a		5e-21
1g4x_A	396	Aspartate Aminotransferase Active Site Mutant N194a		5e-21
3aat_A	396	Activity And Structure Of The Active-Site Mutants R		5e-21
4h51_A	420	Crystal Structure Of A Putative Aspartate Aminotran		5e-21
2d5y_A	396	Aspartate Aminotransferase Mutant Mc With Isovaleri		1e-20
2d64_A	396	Aspartate Aminotransferase Mutant Mabc With Isovale		1e-20
3meb_A	448	Structure Of Cytoplasmic Aspartate Aminotransferase		4e-20
3meb_A	448	Structure Of Cytoplasmic Aspartate Aminotransferase		2e-19
1g7x_A	396	Aspartate Aminotransferase Active Site Mutant N194a		4e-20
1ay4_A	394	Aromatic Amino Acid Aminotransferase Without Substr		1e-16
1ay4_A	394	Aromatic Amino Acid Aminotransferase Without Substr		3e-16
3uak_A	406	Crystal Structure Of De Novo Designed Cysteine Este		2e-16
3k7y_A	405	Aspartate Aminotransferase Of Plasmodium Falciparum		7e-13

>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate AminotransferaseKYNURENINE AMINOTRANSFERASE IV Length = 401

Iteration: 1
 Score =  181 bits (458), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 97/122 (79%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 339
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE SVY+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 340 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 399
Query: 419 TK 420
           TK
Sbjct: 400 TK 401

>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate Aminotransferase, A Newly Identified Kynurenine Aminotransferase-Iv Length = 401

Iteration: 1
 Score =  181 bits (458), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 97/122 (79%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P L+ QWL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSS 339
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE SVY+TKDGRIS+AGVTS NVGYLA AIH V
Sbjct: 340 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 399
Query: 419 TK 420
           TK
Sbjct: 400 TK 401

>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms Of Mitochondrial Aspartate Aminotransferase Length = 401

Iteration: 1
 Score =  178 bits (451), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 97/122 (79%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P+L+ +WL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 339
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGV S NVGYLA AIH V
Sbjct: 340 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 399
Query: 419 TK 420
           TK
Sbjct: 400 TK 401

>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate Aminotransferase K258h Lacking Its Pyridoxal-5'-Phosphate-Binding Lysine Residue Length = 401

Iteration: 1
 Score =  177 bits (450), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 97/122 (79%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P+L+ +WL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 339
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGV S NVGYLA AIH V
Sbjct: 340 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 399
Query: 419 TK 420
           TK
Sbjct: 400 TK 401

>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic Aspartate Aminotransferase Length = 411

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 2/125 (1%)
Query: 297 LEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG 356
           +EKI +R  +S+PP  GARIV   L  P+L A+W   VK MADR++ MR  L+  L+  G
Sbjct: 286 MEKI-VRTTWSNPPSQGARIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLG 344
Query: 357 SNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIH 416
           +   WNHITDQIGMF +TGLN  QVE +IKE  +YL   GRI+M G+T+KN+ Y+AK+IH
Sbjct: 345 TPGTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIH 404
Query: 417 -AVTK 420
            AVTK
Sbjct: 405 EAVTK 409

>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic Aspartate Aminotransferase At 1.9 Angstroms Resolution Length = 411

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 2/125 (1%)
Query: 297 LEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG 356
           +EKI +R  +S+PP  GARIV   L  P+L A+W   VK MADR++ MR  L+  L+  G
Sbjct: 286 MEKI-VRTTWSNPPSQGARIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLG 344
Query: 357 SNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIH 416
           +   WNHITDQIGMF +TGLN  QVE +IKE  +YL   GRI+M G+T+KN+ Y+AK+IH
Sbjct: 345 TPGTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIH 404
Query: 417 -AVTK 420
            AVTK
Sbjct: 405 EAVTK 409

>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate Length = 412

Iteration: 1
 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 301 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP 360
           ++R  +S+PP  GARIV   L DP+L  +W   VK MADRI+SMR  L+  L+   +   
Sbjct: 290 IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGT 349
Query: 361 WNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIH-AVT 419
           WNHITDQIGMF +TGLN  QVE LI +  +YL   GRI+M G+T+KN+ Y+A +IH AVT
Sbjct: 350 WNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVT 409
Query: 420 K 420
           K
Sbjct: 410 K 410

>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate Length = 412

Iteration: 1
 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 301 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP 360
           ++R  +S+PP  GARIV   L DP+L  +W   VK MADRI+SMR  L+  L+   +   
Sbjct: 290 IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGT 349
Query: 361 WNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIH-AVT 419
           WNHITDQIGMF +TGLN  QVE LI +  +YL   GRI+M G+T+KN+ Y+A +IH AVT
Sbjct: 350 WNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVT 409
Query: 420 K 420
           K
Sbjct: 410 K 410

>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate Transaminase 1 (Got1) Length = 422

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
Query: 297 LEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEG 356
           +EKI +R  +S+PP  GARIV   L +P+L  +W   VK MADRI++MR  L+  L+   
Sbjct: 276 MEKI-VRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMRSELRARLEALK 334
Query: 357 SNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIH 416
           +   WNHITDQIGMF +TGLN  QVE L+ E  +YL   GRI+++G+T+KN+ Y+A +IH
Sbjct: 335 TPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLDYVATSIH 394
Query: 417 -AVTK 420
            AVTK
Sbjct: 395 EAVTK 399

>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase From Trypanosoma Brucei Length = 409

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 81/121 (66%)
Query: 300 ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK 359
           +LIR  Y++PP++GA +V  IL DP+L A W  E+K M+ RI  +R+ L   L+  GS  
Sbjct: 289 LLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVH 348
Query: 360 PWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVT 419
            W+HI  Q+GM  YTGL   QVE L  E+ +Y+T +GR +++G+ S NV Y+++AIH VT
Sbjct: 349 DWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHNVT 408
Query: 420 K 420
           K
Sbjct: 409 K 409

>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae Cytoplasm Length = 412

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 79/120 (65%)
Query: 301 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP 360
           +IR+  S+PP +GA+IV ++L  P+L  QW  ++  M+ RI  MR +L+D+L K G+   
Sbjct: 290 IIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGN 349
Query: 361 WNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK 420
           W+HI +Q GMF +TGL    V++L + H+VYL   GR S+AG+   NV Y+AKAI  V +
Sbjct: 350 WDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEVVR 409

>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli Length = 397

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 296 GLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355
           G  K  +R  YSSPP  GA++V  +L D  LKA WL EV+ M  RI++MRQ L   L  E
Sbjct: 274 GQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTE 333
Query: 356 GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAI 415
              + ++++ +Q GMF YTGL+A QV++L +E  VYL   GR+ +AG+ + NV  +AKA 
Sbjct: 334 MPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393
Query: 416 HAV 418
            AV
Sbjct: 394 AAV 396

>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple Mutant (P181q, R183g,A321k) From Escherichia Coli At 2.35 A Resolution Length = 397

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 296 GLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355
           G  K  +R  YSSPP  GA++V  +L D  LKA WL EV+ M  RI++MRQ L   L  E
Sbjct: 274 GQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTE 333
Query: 356 GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAI 415
              + ++++ +Q GMF YTGL+A QV++L +E  VYL   GR+ +AG+ + NV  +AKA 
Sbjct: 334 MPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393
Query: 416 HAV 418
            AV
Sbjct: 394 AAV 396

>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase From Burkholderia Pseudomallei Covalently Bound To Pyridoxal Phosphate Length = 420

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 75/122 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K +IR  YS+PP HG  IV  +L  P+L+A W+ E+  M DRI +MR  L + L+  G  
Sbjct: 299 KRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIE 358
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF Y+GL + QV++L +E  +Y    GRI +A + ++N+  +A AI AV
Sbjct: 359 RDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAAV 418
Query: 419 TK 420
            K
Sbjct: 419 LK 420

>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase From Burkholderia Pseudomallei Length = 420

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 75/122 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K +IR  YS+PP HG  IV  +L  P+L+A W+ E+  M DRI +MR  L + L+  G  
Sbjct: 299 KRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIE 358
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF Y+GL + QV++L +E  +Y    GRI +A + ++N+  +A AI AV
Sbjct: 359 RDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAAV 418
Query: 419 TK 420
            K
Sbjct: 419 LK 420

>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++  NF    + +   T    +   + +  G  K  IRA YSSPP HGA +V  I
Sbjct: 238 LIVASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRANYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli Pyridoxal-5'-phosphate Dependent Aspartate Aminotransferase To Tyrosine Aminotransferase: Chimera P4. Length = 406

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YSSPP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 286 KAAIRANYSSPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GRI++AG+T  N+  L +AI AV
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIVAV 405

>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant Length = 396

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate Aminotransferase To Tyrosine Aminotransferase By The Janus Algorithm: Chimera P6. Length = 406

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 75/123 (60%)
Query: 296 GLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355
           G  K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++
Sbjct: 283 GQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 342
Query: 356 GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAI 415
           G+N+ ++ I  Q GMF ++GL   QV +L +E  VY    GRI++AG+T  N+  L +AI
Sbjct: 343 GANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAI 402
Query: 416 HAV 418
            AV
Sbjct: 403 VAV 405

>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To Tyrosine Aminotransferase: Chimera P1. Length = 406

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 286 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GRI++AG+T  N+  L +AI AV
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIVAV 405

>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++  NF    + +   T    +   + +  G  K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRDNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The D223a(D222a) Active Site Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate Aminotransferase In Two Conformations: Comparison Of An Unliganded Open And Two Liganded Closed Forms Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An Active-Site Mutant Of Aspartate Aminotransferase From Escherichia Coli Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Length = 396

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate Aminotransferase To Tyrosine Aminotransferase: Chimera P3. Length = 406

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YSSPP HGA +V  IL +  L+A W  E+  M  RI  +RQ   + LQ++G+N
Sbjct: 286 KAAIRANYSSPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRLRQLFVNTLQEKGAN 345
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 405

>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template For The Interconversion Of Substrate Specificity And Activity To Tyrosine Aminotransferase By The Janus Algorithm. Length = 406

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 286 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 405

>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli L-Aspartate Aminotransferase (S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta) Via Two Mechanisms At Ph 6.0 Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of Substrate Specificity From E.coli Aspartate Aminotransferase To Tyrosine Aminotransferase: Mutant P5. Length = 406

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 286 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 405

>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w Mutation, With Bound Maleate Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate Aminotransferase K258h Lacking The Pyridoxal-5'-Phosphate Binding Lysine Residue Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 74/120 (61%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate Aminotransferase To Tyrosine Aminotransferase: Mutant P2. Length = 406

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 75/123 (60%)
Query: 296 GLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355
           G  K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++
Sbjct: 283 GQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 342
Query: 356 GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAI 415
           G+N+ ++ +  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI
Sbjct: 343 GANRDFSFVIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 402
Query: 416 HAV 418
            AV
Sbjct: 403 VAV 405

>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab Length = 396

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E. Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IR  YSSPP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRDNYSSPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH GLUTARIC ACID Length = 396

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 86/158 (54%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           LG+  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++    Q GMF + GL   Q
Sbjct: 298 LGNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAV 395

>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric Acid Length = 396

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 86/158 (54%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           LG+  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++    Q GMF + GL   Q
Sbjct: 298 LGNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAV 395

>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT Length = 396

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    G +++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGAVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity Of The R292d Active Site Mutant Of Aspartate Aminotransferase From E. Coli Length = 396

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  I A YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIDANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase Length = 396

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  I A YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIYANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L Length = 396

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    G +++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGLVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L Length = 396

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  I A YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y And R386f Of Escherichia Coli Aspartate Aminotransferase Length = 396

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 87/158 (55%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IRA YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    G +++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGFVNVAGMTPDNMAPLCEAIVAV 395

>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase From Leishmania Major Friedlin Length = 420

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 301 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKP 360
           LIR  Y+ PP HGAR+   IL + +L+ +W  E+  MA+RI +MR+++ D L +  +   
Sbjct: 297 LIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGS 356
Query: 361 WNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK 420
           W H+ +QIGMF + GL+  Q E   + H++++T  GR +MAG+T +    LA+ I+   +
Sbjct: 357 WEHVINQIGMFSFLGLSKAQCE-YCQNHNIFITVSGRANMAGLTHETALMLAQTINDAVR 415

>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid Length = 396

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 85/158 (53%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++    Q GMF + GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAV 395

>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric Acid Length = 396

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 85/158 (53%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++    Q GMF + GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAV 395

>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From Giardia Lamblia Length = 448

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 23/144 (15%)
Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN--KNLDKEYAPIIGAPD 207
           LT  +  DTN  K+NLGVGAYRD+ GKP++LP+VK+A+ I+ +     +KEY P+ G P 
Sbjct: 39  LTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPL 98
Query: 208 FGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAF 267
           F + A  L +G+D    ++  I+  Q +SGTGSL +G  F+                  F
Sbjct: 99  FLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIG--FE------------------F 138
Query: 268 LKNFFPGEKVIYVPTPTWGNHIPI 291
           L  + P  +  Y+P+ TW NH  I
Sbjct: 139 LHLWMPKAE-FYMPSTTWPNHYGI 161

>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From Giardia Lamblia Length = 448

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 230 SIVQGISGTGSLRVGA-AFQISIVQGISGTGSLRVGAAFLKNF-FPGEKVIYVPTPTWGN 287
           S  QG + TGS    A A ++ +  G+     + V  +F KNF   GE++  +     G 
Sbjct: 242 SAYQGFA-TGSFEADAFAVRMFVDAGVE----VLVAQSFSKNFGLYGERIGCLHVVHAGV 296
Query: 288 HIPICKHTGLEKIL-------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADR 340
              + K+  L   +       IR  +S   IHGA IVQ I+ D +L   +   VK M+ R
Sbjct: 297 EGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSAR 356
Query: 341 IISMRQSLKDNLQKE-----GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK- 394
           I  MR  L  +L K      GS   W+HI   IGMF +TGL    V+ L ++ S+YL K 
Sbjct: 357 IHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKA 416
Query: 395 DGRISMAGVTSKNVGYLAKAIH-AVTK 420
            GR+SM G+T  N  Y+A+AIH AVTK
Sbjct: 417 GGRMSMCGLTESNCDYVAEAIHDAVTK 443

>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292LR386L Length = 396

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 86/158 (54%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  I A YS+PP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    G +++AG+T  N+  L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGLVNVAGMTPDNMAPLCEAIVAV 395

>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate Length = 394

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 2   LFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 61
           L   A   L R  YS PP HGA+IV  +L  P+L+A W+ E++ +   ++ +R+ L   L
Sbjct: 267 LAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGEL 326
Query: 62  QKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLA 121
           +    +  +  + +  GMF   G    QV+++ +E  +Y+  D RI++AG+    +  LA
Sbjct: 327 RDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILA 386
Query: 122 KAI 124
           +AI
Sbjct: 387 RAI 389

>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate Length = 394

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%)
Query: 296 GLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE 355
           G    L R  YS PP HGA+IV  +L  P+L+A W+ E++ +   ++ +R+ L   L+  
Sbjct: 270 GAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL 329
Query: 356 GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAI 415
             +  +  + +  GMF   G    QV+++ +E  +Y+  D RI++AG+    +  LA+AI
Sbjct: 330 SGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAI 389

>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase Ech14, Northeast Structural Genomics Consortium Target Or54 Length = 406

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 82/158 (51%)
Query: 261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEI 320
           L V +++ KNF    + +   T    +   + +     K  IR  YSSPP HGA +V  I
Sbjct: 238 LIVASSYSKNFGLYNESVGACTLVAADSETVDRAFSQXKAAIRDNYSSPPAHGASVVATI 297
Query: 321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ 380
           L +  L+A W  E+     RI   RQ   + LQ++G+N+ ++ I  Q G F ++GL   Q
Sbjct: 298 LSNDALRAIWEQELTDXRQRIQRXRQLFVNTLQEKGANRDFSFIIKQNGXFSFSGLTKEQ 357
Query: 381 VEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           V +L +E  VY    GR+++AG T  N   L +AI AV
Sbjct: 358 VLRLREEFGVYAVASGRVNVAGXTPDNXAPLCEAIVAV 395

>pdb|3K7Y|A Chain A, Aspartate Aminotransferase Of Plasmodium Falciparum Length = 405

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 288 HIPICKHTGLEKI-------LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADR 340
           HI +CK+   +KI       ++R FYSSP IH  RI+ ++L +  LK  W+ E+  ++ R
Sbjct: 262 HI-VCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR 320
Query: 341 IISMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDG 396
           I + R    + L+    K   N  WN    Q G+F +  L A   E L K H +Y+  +G
Sbjct: 321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNG 379
Query: 397 RISMAGVTSKNVGYLAKAI 415
           RI+++G+T  NV Y+A  I
Sbjct: 380 RINVSGITKNNVDYIADKI 398

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	420
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	2e-70
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	4e-68
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	4e-57
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	3e-70
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	3e-68
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	3e-54
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	4e-70
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	8e-68
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	1e-59
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	5e-70
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	1e-67
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	1e-55
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	2e-69
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	3e-67
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	7e-55
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	4e-69
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	5e-68
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	1e-57
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	6e-69
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	6e-68
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	2e-55
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	8e-69
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	2e-67
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	2e-54
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	4e-65
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	7e-64
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	5e-57
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	2e-64
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	5e-63
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	1e-52
3rq1_A	418	Aminotransferase class I and II; structural genomi	7e-59
3rq1_A	418	Aminotransferase class I and II; structural genomi	5e-57
3rq1_A	418	Aminotransferase class I and II; structural genomi	2e-47
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	4e-57
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	6e-55
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	8e-49
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	3e-39
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	2e-38
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	5e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Length = 420

 Score =  227 bits (580), Expect = 2e-70
 Identities = 50/122 (40%), Positives = 75/122 (61%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K +IR  YS+PP HG  IV  +L  P+L+A W+ E+  M DRI +MR  L + L+  G  
Sbjct: 299 KRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIE 358

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF Y+GL + QV++L +E  +Y    GRI +A + ++N+  +A AI AV
Sbjct: 359 RDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAAV 418

Query: 419 TK 420
            K
Sbjct: 419 LK 420

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Length = 420

 Score =  221 bits (565), Expect = 4e-68
 Identities = 48/119 (40%), Positives = 73/119 (61%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K +IR  YS+PP HG  IV  +L  P+L+A W+ E+  M DRI +MR  L + L+  G  
Sbjct: 299 KRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIE 358

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
           + ++ I  Q GMF Y+GL + QV++L +E  +Y    GRI +A + ++N+  +A AI A
Sbjct: 359 RDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAA 417

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Length = 420

 Score =  192 bits (490), Expect = 4e-57
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 21/149 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L EAF  DT   K+NLGVG Y ++ GK  +L +V+ A++  +   L + Y PI G   + 
Sbjct: 39  LNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYD 98

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
               +L  G+D P +                       ++   Q + GTG+L++GA FL+
Sbjct: 99  ASVQKLLLGDDSPLIAAG--------------------RVVTAQALGGTGALKIGADFLR 138

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
              P  KV  +  P+W NH  +    G E
Sbjct: 139 TLNPKAKV-AISDPSWENHRALFDMAGFE 166

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Length = 394

 Score =  225 bits (577), Expect = 3e-70
 Identities = 38/121 (31%), Positives = 66/121 (54%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             L R  YS PP HGA+IV  +L  P+L+A W+ E++ +   ++ +R+ L   L+    +
Sbjct: 273 AFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGS 332

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             +  + +  GMF   G    QV+++ +E  +Y+  D RI++AG+    +  LA+AI  V
Sbjct: 333 DRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEV 392

Query: 419 T 419
            
Sbjct: 393 G 393

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Length = 394

 Score =  220 bits (564), Expect = 3e-68
 Identities = 37/119 (31%), Positives = 65/119 (54%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
             L R  YS PP HGA+IV  +L  P+L+A W+ E++ +   ++ +R+ L   L+    +
Sbjct: 273 AFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGS 332

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             +  + +  GMF   G    QV+++ +E  +Y+  D RI++AG+    +  LA+AI  
Sbjct: 333 DRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIE 391

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Length = 394

 Score =  184 bits (469), Expect = 3e-54
 Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 24/149 (16%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L   F+ D    KI+LGVG Y+D  G   ++ +V  A++ +L     K YA + G P+F 
Sbjct: 16  LMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQ 75

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           K   +L  G+    LK                          +  + GTG+LR      +
Sbjct: 76  KAMGELILGDG---LKSE--------------TTAT------LATVGGTGALRQALELAR 112

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
              P  +V +V  PTW NH+ I    GL 
Sbjct: 113 MANPDLRV-FVSDPTWPNHVSIMNFMGLP 140

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Length = 401

 Score =  225 bits (577), Expect = 4e-70
 Identities = 84/122 (68%), Positives = 97/122 (79%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           KILIR  YS+PP++GARI   IL  P+L+ +WL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 339

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGV S NVGYLA AIH V
Sbjct: 340 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 399

Query: 419 TK 420
           TK
Sbjct: 400 TK 401

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Length = 401

 Score =  219 bits (561), Expect = 8e-68
 Identities = 81/119 (68%), Positives = 94/119 (78%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           KILIR  YS+PP++GARI   IL  P+L+ +WL EVKGMADRIISMR  L  NL+KEGS+
Sbjct: 280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS 339

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGV S NVGYLA AIH 
Sbjct: 340 HNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQ 398

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Length = 401

 Score =  198 bits (505), Expect = 1e-59
 Identities = 73/149 (48%), Positives = 93/149 (62%), Gaps = 20/149 (13%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           +TEAFK+DTN  K+NLGVGAYRDD GKPYVL  V++A+ ++  K +DKEY PI G  DF 
Sbjct: 18  VTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFT 77

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           + +A+LA GE+    K                R         VQGISGTGSLRVGA FL+
Sbjct: 78  RASAELALGENSEAFKSG--------------RYVT------VQGISGTGSLRVGANFLQ 117

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
            FF   + +Y+P P+WGNH PI +  GL+
Sbjct: 118 RFFKFSRDVYLPKPSWGNHTPIFRDAGLQ 146

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Length = 409

 Score =  225 bits (576), Expect = 5e-70
 Identities = 56/122 (45%), Positives = 81/122 (66%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
            +LIR  Y++PP++GA +V  IL DP+L A W  E+K M+ RI  +R+ L   L+  GS 
Sbjct: 288 ALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSV 347

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W+HI  Q+GM  YTGL   QVE L  E+ +Y+T +GR +++G+ S NV Y+++AIH V
Sbjct: 348 HDWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHNV 407

Query: 419 TK 420
           TK
Sbjct: 408 TK 409

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Length = 409

 Score =  219 bits (561), Expect = 1e-67
 Identities = 53/119 (44%), Positives = 78/119 (65%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
            +LIR  Y++PP++GA +V  IL DP+L A W  E+K M+ RI  +R+ L   L+  GS 
Sbjct: 288 ALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSV 347

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             W+HI  Q+GM  YTGL   QVE L  E+ +Y+T +GR +++G+ S NV Y+++AIH 
Sbjct: 348 HDWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHN 406

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Length = 409

 Score =  188 bits (479), Expect = 1e-55
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 25/149 (16%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L + F+ D    K+NL +G YRDD  +P+VL  VKQA         + +YAP+ G   F 
Sbjct: 31  LGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQAT-----LGTNMDYAPVTGIASFV 85

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           + A +L +G  C  L+D               R+ +       Q + GTG+LR+G   L 
Sbjct: 86  EEAQKLCFGPTCAALRDG--------------RIAS------CQTLGGTGALRIGGDLLN 125

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
            F      IY P   + NH  I    G+E
Sbjct: 126 RFVANCNRIYGPDVGYPNHESIFAKAGME 154

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Length = 412

 Score =  224 bits (572), Expect = 2e-69
 Identities = 53/122 (43%), Positives = 79/122 (64%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
             +IR+  S+PP +GA+IV ++L  P+L  QW  ++  M+ RI  MR +L+D+L K G+ 
Sbjct: 288 AKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTP 347

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             W+HI +Q GMF +TGL    V++L + H+VYL   GR S+AG+   NV Y+AKAI  V
Sbjct: 348 GNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEV 407

Query: 419 TK 420
            +
Sbjct: 408 VR 409

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Length = 412

 Score =  218 bits (558), Expect = 3e-67
 Identities = 52/119 (43%), Positives = 77/119 (64%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
             +IR+  S+PP +GA+IV ++L  P+L  QW  ++  M+ RI  MR +L+D+L K G+ 
Sbjct: 288 AKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTP 347

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             W+HI +Q GMF +TGL    V++L + H+VYL   GR S+AG+   NV Y+AKAI  
Sbjct: 348 GNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDE 406

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Length = 412

 Score =  186 bits (474), Expect = 7e-55
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 22/150 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN-KNLDKEYAPIIGAPDF 208
           + + + +D    K++LG+GAYRDD GKP+VLPSVK A++++ N  + + EY  I G P  
Sbjct: 19  IKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSL 78

Query: 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFL 268
              AA++ +G     L+++              RV +      VQ +SGTG+L + A F 
Sbjct: 79  TSNAAKIIFGTQSDALQED--------------RVIS------VQSLSGTGALHISAKFF 118

Query: 269 KNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
             FFP + V Y+  PTW NH+ I ++ GL+
Sbjct: 119 SKFFPDKLV-YLSKPTWANHMAIFENQGLK 147

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Length = 396

 Score =  222 bits (569), Expect = 4e-69
 Identities = 52/120 (43%), Positives = 74/120 (61%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Length = 396

 Score =  220 bits (562), Expect = 5e-68
 Identities = 51/119 (42%), Positives = 73/119 (61%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI A
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVA 394

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Length = 396

 Score =  192 bits (491), Expect = 1e-57
 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 21/149 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L + F+ D    KINLG+G Y+D+ GK  VL SVK+A++ +L     K Y  I G P+FG
Sbjct: 16  LADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFG 75

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           +   +L +G+    + D                     +    Q   GTG+LRV A FL 
Sbjct: 76  RCTQELLFGKGSALINDK--------------------RARTAQTPGGTGALRVAADFLA 115

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
                ++V +V  P+W NH  +    GLE
Sbjct: 116 KNTSVKRV-WVSNPSWPNHKSVFNSAGLE 143

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A* Length = 397

 Score =  222 bits (569), Expect = 6e-69
 Identities = 55/120 (45%), Positives = 77/120 (64%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K  +R  YSSPP  GA++V  +L D  LKA WL EV+ M  RI++MRQ L   L  E   
Sbjct: 277 KATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPE 336

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           + ++++ +Q GMF YTGL+A QV++L +E  VYL   GR+ +AG+ + NV  +AKA  AV
Sbjct: 337 RNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAV 396

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A* Length = 397

 Score =  219 bits (561), Expect = 6e-68
 Identities = 54/119 (45%), Positives = 76/119 (63%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K  +R  YSSPP  GA++V  +L D  LKA WL EV+ M  RI++MRQ L   L  E   
Sbjct: 277 KATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPE 336

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
           + ++++ +Q GMF YTGL+A QV++L +E  VYL   GR+ +AG+ + NV  +AKA  A
Sbjct: 337 RNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAA 395

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A* Length = 397

 Score =  187 bits (476), Expect = 2e-55
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 22/150 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN-LDKEYAPIIGAPDF 208
           L E FK+D   +K+NL +G Y ++ G    L +V +A+  +  +      Y P+ G   +
Sbjct: 16  LMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCY 75

Query: 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFL 268
               A L +G D P LK                      +++ +Q + G+G+L+VGA FL
Sbjct: 76  RHAIAPLLFGADHPVLKQQ--------------------RVATIQTLGGSGALKVGADFL 115

Query: 269 KNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
           K +FP   V +V  PTW NH+ I    G E
Sbjct: 116 KRYFPESGV-WVSDPTWENHVAIFAGAGFE 144

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Length = 412

 Score =  222 bits (569), Expect = 8e-69
 Identities = 60/122 (49%), Positives = 80/122 (65%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           + ++R  +S+PP  GARIV   L DP+L  +W   VK MADRI+SMR  L+  L+   + 
Sbjct: 288 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 347

Query: 359 KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
             WNHITDQIGMF +TGLN  QVE LI +  +YL   GRI+M G+T+KN+ Y+A +IH  
Sbjct: 348 GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA 407

Query: 419 TK 420
             
Sbjct: 408 VT 409

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Length = 412

 Score =  219 bits (559), Expect = 2e-67
 Identities = 60/119 (50%), Positives = 80/119 (67%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           + ++R  +S+PP  GARIV   L DP+L  +W   VK MADRI+SMR  L+  L+   + 
Sbjct: 288 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 347

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             WNHITDQIGMF +TGLN  QVE LI +  +YL   GRI+M G+T+KN+ Y+A +IH 
Sbjct: 348 GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHE 406

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Length = 412

 Score =  184 bits (470), Expect = 2e-54
 Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 25/156 (16%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDF 208
           L   F++D +  K+NLGVGAYR D  +P+VLP V++ ++ + N  +L+ EY PI+G  +F
Sbjct: 20  LIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEF 79

Query: 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFL 268
              A++LA G+D P L++               RVG       VQ + GTG+LR+GA FL
Sbjct: 80  RTCASRLALGDDSPALQEK--------------RVGG------VQSLGGTGALRIGAEFL 119

Query: 269 KNFFPG----EKVIYVPTPTWGNHIPICKHTGLEKI 300
             ++ G    +  +YV +PTW NH  +    G + I
Sbjct: 120 ARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDI 155

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} Length = 405

 Score =  212 bits (543), Expect = 4e-65
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ----K 354
             ++R FYSSP IH  RI+ ++L +  LK  W+ E+  ++ RI + R    + L+    K
Sbjct: 279 CFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKK 338

Query: 355 EGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKA 414
              N  WN    Q G+F +  L A   E L K H +Y+  +GRI+++G+T  NV Y+A  
Sbjct: 339 YNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADK 397

Query: 415 IHAVTK 420
           I     
Sbjct: 398 ICLSLS 403

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} Length = 405

 Score =  209 bits (535), Expect = 7e-64
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ----K 63
             ++R FYSSP IH  RI+ ++L +  LK  W+ E+  ++ RI + R    + L+    K
Sbjct: 279 CFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKK 338

Query: 64  EGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKA 123
              N  WN    Q G+F +  L A   E L K H +Y+  +GRI+++G+T  NV Y+A  
Sbjct: 339 YNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADK 397

Query: 124 IHA 126
           I  
Sbjct: 398 ICL 400

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} Length = 405

 Score =  191 bits (488), Expect = 5e-57
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
               FK+DT   KINL +G   +D G  ++  SV  AD++V     +K Y    G  DF 
Sbjct: 19  TAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKLVTENYKEKPYLLGNGTEDFS 78

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
            L   L +G +   ++D               ++        +Q I GTG++ V   FLK
Sbjct: 79  TLTQNLIFGNNSKYIEDK--------------KICT------IQCIGGTGAIFVLLEFLK 118

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
                 + +YV  P + NH+ + +  G  
Sbjct: 119 MLNV--ETLYVTNPPYINHVNMIESRGFN 145

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Length = 448

 Score =  212 bits (541), Expect = 2e-64
 Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
            + IR  +S   IHGA IVQ I+ D +L   +   VK M+ RI  MR  L  +L K  + 
Sbjct: 315 TLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTP 374

Query: 359 KP-----WNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK-DGRISMAGVTSKNVGYLA 412
            P     W+HI   IGMF +TGL    V+ L ++ S+YL K  GR+SM G+T  N  Y+A
Sbjct: 375 GPGSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVA 434

Query: 413 KAIHAVTK 420
           +AIH    
Sbjct: 435 EAIHDAVT 442

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Length = 448

 Score =  208 bits (532), Expect = 5e-63
 Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 6/125 (4%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
            + IR  +S   IHGA IVQ I+ D +L   +   VK M+ RI  MR  L  +L K  + 
Sbjct: 315 TLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTP 374

Query: 68  KP-----WNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK-DGRISMAGVTSKNVGYLA 121
            P     W+HI   IGMF +TGL    V+ L ++ S+YL K  GR+SM G+T  N  Y+A
Sbjct: 375 GPGSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVA 434

Query: 122 KAIHA 126
           +AIH 
Sbjct: 435 EAIHD 439

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Length = 448

 Score =  181 bits (461), Expect = 1e-52
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 23/160 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN--KNLDKEYAPIIGAPD 207
           LT  +  DTN  K+NLGVGAYRD+ GKP++LP+VK+A+ I+ +     +KEY P+ G P 
Sbjct: 39  LTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPL 98

Query: 208 FGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAF 267
           F + A  L +G+D    ++               R+ +       Q +SGTGSL +G  F
Sbjct: 99  FLEAAQFLMFGKDSKAAQEG--------------RIAS------CQSLSGTGSLHIGFEF 138

Query: 268 LKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYS 307
           L  + P  +  Y+P+ TW NH  I      +  +    Y+
Sbjct: 139 LHLWMPKAEF-YMPSTTWPNHYGIYDKVFNKLKVPYKEYT 177

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418

 Score =  197 bits (502), Expect = 7e-59
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 299 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 358
           K   RA +S+      R +  I+ DP    ++  E       I       K    + G  
Sbjct: 292 KSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG-- 349

Query: 359 KPWNHITDQIGMFCYTGLNATQ--VEKLIKEH--SVYLTKDGRISMAGVTSKNVGYLAKA 414
                +  + G F     ++     E+L KEH   + L    RI+  G+    +  LA+ 
Sbjct: 350 --LPMLPYRGGFFITIPTDSANAICEELKKEHIYVIALANGIRIAACGIPKCQMTGLAEK 407

Query: 415 IHAVTK 420
           I+   K
Sbjct: 408 IYNAMK 413

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418

 Score =  192 bits (489), Expect = 5e-57
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K   RA +S+      R +  I+ DP    ++  E       I       K    + G  
Sbjct: 292 KSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG-- 349

Query: 68  KPWNHITDQIGMFCYTGLNATQ--VEKLIKEH--SVYLTKDGRISMAGVTSKNVGYLAKA 123
                +  + G F     ++     E+L KEH   + L    RI+  G+    +  LA+ 
Sbjct: 350 --LPMLPYRGGFFITIPTDSANAICEELKKEHIYVIALANGIRIAACGIPKCQMTGLAEK 407

Query: 124 IHA 126
           I+ 
Sbjct: 408 IYN 410

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418

 Score =  166 bits (423), Expect = 2e-47
 Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 27/152 (17%)

Query: 147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAP 206
           +       K++   N +N  +GA  D++G    L +VK+   + L+ +    YAPI G P
Sbjct: 25  AGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEE-YLSLSDSEHVGYAPIAGIP 83

Query: 207 DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAA 266
           DF   A +  +G   P   +  I  +    GTG +                         
Sbjct: 84  DFLCAAEKECFGNFRP---EGHIRSIATAGGTGGIHHLIHN------------------- 121

Query: 267 FLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
               +      +      WG +  IC  TG  
Sbjct: 122 ----YTEPGDEVLTADWYWGAYRVICSDTGRT 149

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  144 bits (366), Expect = 3e-39
 Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 13/131 (9%)

Query: 299 KILIRAFYSSPPIHGARIVQEIL-GDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGS 357
           K LIR+  SS P+     V+ +L  + +   +    ++ + +R    ++ +  +      
Sbjct: 301 KGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH- 359

Query: 358 NKPWNHITDQIGMFCYTGLNATQVE----KLIKEHSVYL----TKDGRISMAGVTSKNVG 409
              W       G F    ++    E     LI ++S+ +      D RI+ + V   ++ 
Sbjct: 360 ---WQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIP 416

Query: 410 YLAKAIHAVTK 420
           ++  +I     
Sbjct: 417 HVFDSIAKAID 427

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  142 bits (360), Expect = 2e-38
 Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 13/128 (10%)

Query: 8   KILIRAFYSSPPIHGARIVQEIL-GDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGS 66
           K LIR+  SS P+     V+ +L  + +   +    ++ + +R    ++ +  +      
Sbjct: 301 KGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH- 359

Query: 67  NKPWNHITDQIGMFCYTGLNATQVE----KLIKEHSVYL----TKDGRISMAGVTSKNVG 118
              W       G F    ++    E     LI ++S+ +      D RI+ + V   ++ 
Sbjct: 360 ---WQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIP 416

Query: 119 YLAKAIHA 126
           ++  +I  
Sbjct: 417 HVFDSIAK 424

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  122 bits (308), Expect = 5e-31
 Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 25/156 (16%)

Query: 151 TEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK 210
             +   +      N  +G   +  GK +   S   A    L  +    YAP  G  +   
Sbjct: 38  ILSQSAEAKSTTYNATIGMATNKDGKMFA--SSLDAMFNDLTPDEIFPYAPPQGIEELRD 95

Query: 211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN 270
           L  Q    ++     DN+   +   + T  L                     +      N
Sbjct: 96  LWQQKMLRDNPELSIDNMSRPIVTNALTHGLS--------------------LVGDLFVN 135

Query: 271 FFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFY 306
               + ++ +P   WGN+  +        +     +
Sbjct: 136 --QDDTIL-LPEHNWGNYKLVFNTRNGANLQTYPIF 168

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 48/364 (13%), Positives = 102/364 (28%), Gaps = 142/364 (39%)

Query: 136 DARTSSVKVPSSNLLT---EAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN 192
           D  T   +    ++L+   +AF  + +   +         D  K  +L S ++ D I+++
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDV--------QDMPKS-IL-SKEEIDHIIMS 57

Query: 193 KN------------LDKE---YAPIIG---APDFGKLAAQLAYGEDCP------------ 222
           K+            L K+       +      ++  L + +   +  P            
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 223 ---------------------QLKDNLIS-------IVQGISGTG--SLRVGAAFQISIV 252
                                +L+  L+        ++ G+ G+G   + +       + 
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177

Query: 253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIH 312
                                 +  I+     W N         + ++L +  Y   P  
Sbjct: 178 C-----------------KMDFK--IF-----WLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 313 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ---SLK--DNLQKEGSNKPWNH---- 363
            +R   +   + KL+   +        R++  +     L    N+Q   + K WN     
Sbjct: 214 TSRS--DHSSNIKLRIHSIQAEL---RRLLKSKPYENCLLVLLNVQ---NAKAWNAFNLS 265

Query: 364 -----------ITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLA 412
                      +TD +         AT     +  HS+ LT D          +    L 
Sbjct: 266 CKILLTTRFKQVTDFLS-------AATTTHISLDHHSMTLTPD----------EVKSLLL 308

Query: 413 KAIH 416
           K + 
Sbjct: 309 KYLD 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	420
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.97
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.97
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.97
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.93
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.93
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.93
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.93
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.91
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.9
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.88
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.83
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.78
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.77
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.77
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.74
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.74
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.72
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.72
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.72
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.7
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.69
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.69
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.69
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.68
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.68
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.67
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.67
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.67
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.67
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.67
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.67
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.66
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.65
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.64
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.64
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.63
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.62
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.62
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.61
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.61
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.6
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.6
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.6
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.59
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.59
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.59
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.59
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.58
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.58
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.58
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.57
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.57
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.57
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.55
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.54
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.54
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.54
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.53
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.53
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.5
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.5
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.49
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.49
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.49
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.48
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.48
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.47
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.46
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.45
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.44
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.41
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.39
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.38
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.37
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.35
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.33
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.32
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.28
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.28
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.26
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.23
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	98.86
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.22
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.18
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.12
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.11
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.03
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.01
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	98.99
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	98.99
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	98.98
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	98.97
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	98.95
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	98.94
1svv_A	359	Threonine aldolase; structural genomics, structura	98.91
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	98.9
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	98.87
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	98.85
1iug_A	352	Putative aspartate aminotransferase; wild type, py	98.82
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	98.81
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	98.79
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	98.77
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	98.76
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	98.75
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	98.74
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	98.73
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	98.69
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	98.69
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	98.69
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	98.68
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	98.68
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	98.68
3rq1_A	418	Aminotransferase class I and II; structural genomi	98.68
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	98.66
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	98.66
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	98.64
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	98.64
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	98.63
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	98.61
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	98.61
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	98.53
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	98.5
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	98.49
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	98.48
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	98.46
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	98.44
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	98.43
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	98.42
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	98.36
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	98.35
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	98.34
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	98.34
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	98.33
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	98.32
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	98.31
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	98.29
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	98.25
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	98.25
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	98.23
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	98.23
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	98.22
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	98.2
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	98.2
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	98.18
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	98.17
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	98.16
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	98.16
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	98.15
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	98.13
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	98.13
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	98.13
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	98.09
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	98.09
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	98.08
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	98.08
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	98.07
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	98.05
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	98.04
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	98.03
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	98.02
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	98.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	97.98
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	97.96
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	97.96
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	97.95
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	97.94
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	97.94
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	97.92
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	97.89
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	97.86
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	97.82
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	97.81
3nra_A	407	Aspartate aminotransferase; structural genomics, j	97.79
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	97.78
1z7d_A	433	Ornithine aminotransferase; structural genomics co	97.76
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	97.72
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	97.72
3hmu_A	472	Aminotransferase, class III; structural genomics,	97.69
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	97.64
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	97.64
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	97.64
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	97.59
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	97.59
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	97.54
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	97.53
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	97.53
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	97.52
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	97.51
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	97.49
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	97.48
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	97.48
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	97.48
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	97.46
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	97.46
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	97.44
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	97.44
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	97.43
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	97.43
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	97.41
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	97.37
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	97.37
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	97.34
1o69_A	394	Aminotransferase; structural genomics, unknown fun	97.23
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	97.17
3pj0_A	359	LMO0305 protein; structural genomics, joint center	97.16
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	97.16
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	97.09
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	97.09
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	97.07
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	97.05
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	97.03
2fnu_A	375	Aminotransferase; protein-product complex, structu	97.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	97.0
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	96.99
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	96.98
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	96.92
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	96.88
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	96.82
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	96.77
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	96.77
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	96.75
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	96.73
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	96.73
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	96.71
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	96.69
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	96.69
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	96.64
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	96.64
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	96.62
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	96.55
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	96.55
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	96.55
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	96.51
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	96.51
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	96.49
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	96.48
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	96.48
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	96.46
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	96.45
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	96.45
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	96.44
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	96.44
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	96.39
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	96.3
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	96.29
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	96.25
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	96.25
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	96.23
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	96.23
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	96.21
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	96.17
1vp4_A	425	Aminotransferase, putative; structural genomics, j	96.15
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	96.12
3ele_A	398	Amino transferase; RER070207001803, structural gen	96.09
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	96.09
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	96.03
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	95.97
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	95.96
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	95.94
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	95.84
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	95.81
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	95.81
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	95.77
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	95.77
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	95.77
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	95.74
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	95.68
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	95.63
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	95.62
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	95.54
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	95.5
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	95.46
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	95.41
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	95.34
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	95.31
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	95.27
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	95.15
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	95.14
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	95.12
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	95.08
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	95.06
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	95.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	94.95
1iug_A	352	Putative aspartate aminotransferase; wild type, py	94.91
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	94.87
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	94.85
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	94.77
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	94.72
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	94.43
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	94.35
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	94.3
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	94.25
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	94.24
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	94.16
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	94.13
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	94.02
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	93.99
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	93.97
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	93.94
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	93.91
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	93.9
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	93.79
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	93.69
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	93.66
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	93.51
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	93.41
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	93.37
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	93.14
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	93.11
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	93.11
1svv_A	359	Threonine aldolase; structural genomics, structura	93.09
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	92.95
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	92.83
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	92.81
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	92.8
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	92.68
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	92.45
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	92.36
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	92.15
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	91.36
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	91.91
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	91.79
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	91.61
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	91.57
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	91.44
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	91.0
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	90.84
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	90.34
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	90.13
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	90.12
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	89.82
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	89.35
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	89.16
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	88.86
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	88.82
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	88.77
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	88.75
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	88.67
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	88.64
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	88.18
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	88.12
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	87.82
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	87.58
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	87.29
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	87.28
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	86.7
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	86.69
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	86.49
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	86.4
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	85.85
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	85.5
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	85.46
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	85.08
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	84.31
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	84.12
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	83.94
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	83.86
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	83.73
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	83.13
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	82.76
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	82.73
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	82.45
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	81.97
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	81.47
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	80.05

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=1.2e-57  Score=469.60  Aligned_cols=256  Identities=36%  Similarity=0.631  Sum_probs=237.1

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ++..++||||+++++|++|+++ |||||||+|||+||+||++++|++|++.+.+++.+|+|+|+.|+++||+++++++||
T Consensus        24 v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g  102 (420)
T 4h51_A           24 IQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYG  102 (420)
T ss_dssp             CCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcC
Confidence            3455699999999999999887 999999999999999999999999999988777789999999999999999999999


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc--CCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      .+.   ..+++.+                    +||+|||||+++++.|+..+  +| ||+||||+|+|+||..+++.+|
T Consensus       103 ~~~---~~~~~~~--------------------~qt~ggtga~~~a~~~l~~~~~~p-gd~V~ip~P~w~~y~~i~~~aG  158 (420)
T 4h51_A          103 NTV---ELENLVA--------------------VQTLSGTGAVSLGAKLLTRVFDAE-TTPIYLSDPTWPNHYGVVKAAG  158 (420)
T ss_dssp             ------CGGGEEE--------------------EEEEHHHHHHHHHHHHHTTTSCTT-TSCEEEEESCCTHHHHHHHHTT
T ss_pred             CCc---cccccce--------------------eeecCchHHHHHHHHHHHHhcCCC-CCEEEEecCCchhHHHHHHHcC
Confidence            874   3567777                    99999999999999988764  46 9999999999999999999999


Q ss_pred             cc------------------------------------------------------------------------------
Q psy16707        297 LE------------------------------------------------------------------------------  298 (420)
Q Consensus       297 ~~------------------------------------------------------------------------------  298 (420)
                      ++                                                                              
T Consensus       159 ~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~  238 (420)
T 4h51_A          159 WKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASG  238 (420)
T ss_dssp             CCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS
T ss_pred             CeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccC
Confidence            85                                                                              


Q ss_pred             --------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhC
Q psy16707        299 --------------------------------------------------------KILIRAFYSSPPIHGARIVQEILG  322 (420)
Q Consensus       299 --------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~  322 (420)
                                                                              ..+.|++++|||.++|++++.+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~  318 (420)
T 4h51_A          239 SLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILS  318 (420)
T ss_dssp             CHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred             CcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhc
Confidence                                                                    346789999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcc
Q psy16707        323 DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAG  402 (420)
Q Consensus       323 dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~ag  402 (420)
                      ||+++++|+++++.|++||++||+.|++.|+++|++++|.|+++|+|||+|+|++++|++.| +|+|||++|+||||+||
T Consensus       319 d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~e~v~~L-~e~~Vy~~~~gRis~Ag  397 (420)
T 4h51_A          319 NNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSKAQCEYC-QNHNIFITVSGRANMAG  397 (420)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCHHHHHHH-HHTTEECCTTCEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCHHHHHHH-HhCCEEEcCCCEEEecc
Confidence            99999999999999999999999999999999999999999999999999999999999866 68999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhC
Q psy16707        403 VTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv~  420 (420)
                      +|++||+++|+||++|||
T Consensus       398 l~~~ni~~~a~aI~~vvr  415 (420)
T 4h51_A          398 LTHETALMLAQTINDAVR  415 (420)
T ss_dssp             CCHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            999999999999999986

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=4e-41  Score=344.14  Aligned_cols=258  Identities=33%  Similarity=0.558  Sum_probs=235.0

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHH-ccCCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL-NKNLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~-~~~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++.+++|++|.+.+.++++.++++|||++|.|+|+||+++++++|++|.. +. ++...++|+|+.|+++||++++++++
T Consensus         8 ~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~   86 (405)
T 3k7y_A            8 LENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIF   86 (405)
T ss_dssp             CCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHc
Confidence            78899999999999999999999999999999999999999999999988 64 33568899999999999999999999


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      +.+...+.++++.+                    ++|+||++|+++++.++..+.|  |+|++++|+|++|..+++.+|+
T Consensus        87 ~~~~~~~~~~~i~i--------------------~~t~G~~~al~~~~~~l~~~~~--d~Vlv~~P~y~~~~~~~~~~g~  144 (405)
T 3k7y_A           87 GNNSKYIEDKKICT--------------------IQCIGGTGAIFVLLEFLKMLNV--ETLYVTNPPYINHVNMIESRGF  144 (405)
T ss_dssp             CSSCTTTTTTCEEE--------------------EEEEHHHHHHHHHHHHHHTTTC--CEEEEESSCCHHHHHHHHTTTC
T ss_pred             CCCCccccccceEE--------------------EEcCchHHHHHHHHHHHHhcCC--CEEEEeCCCCHhHHHHHHHcCC
Confidence            98776666666544                    8999999999999988876555  9999999999999999999987


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       145 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~  224 (405)
T 3k7y_A          145 NLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNL  224 (405)
T ss_dssp             EEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSST
T ss_pred             eEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCc
Confidence            5                                                                               


Q ss_pred             ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                            ..+.|..|+++|.++|.+++.+|+++
T Consensus       225 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~  304 (405)
T 3k7y_A          225 EEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQ  304 (405)
T ss_dssp             TGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCH
T ss_pred             ccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence                                                                  11235678999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEE
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISM  400 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~----~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~  400 (420)
                      ++.++|.++++.|+++|+++|+.+++.|+    ++|.++.|.++++++|||.|++++++++++| +++||+++|+||||+
T Consensus       305 ~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~~~~~L-~~~gV~v~p~~Ris~  383 (405)
T 3k7y_A          305 NLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHL-KTHHIYIINNGRINV  383 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGGGTTTT-TTTTEECCTTSEEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHHHHHHH-HHCCEeecCCCeEEE
Confidence            99999999999999999999999999999    8998888999999999999999998999888 999999999999999


Q ss_pred             cccCCCCHHHHHHHHHHHhC
Q psy16707        401 AGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       401 agl~~~ni~~la~AI~~vv~  420 (420)
                      |++++++|++++++|+++++
T Consensus       384 a~~~~~~i~~~~~~i~~~~~  403 (405)
T 3k7y_A          384 SGITKNNVDYIADKICLSLS  403 (405)
T ss_dssp             GGCCTTHHHHHHHHHHHHHH
T ss_pred             eccCHHHHHHHHHHHHHHHh
Confidence            99999999999999999863

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=3.2e-34  Score=294.15  Aligned_cols=266  Identities=39%  Similarity=0.657  Sum_probs=237.8

Q ss_pred             ccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHH--ccCCCCCCCCCCCCHHHH
Q psy16707        132 IRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL--NKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       132 ~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~--~~~~~~~Y~p~~G~~~fr  209 (420)
                      |.+.+. ++..++|+|+.+.+++++|.++++|||++|.|+|.++.+++.+.|++|...+.  +...+++|.|..|.++||
T Consensus        22 ~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr  100 (448)
T 3meb_A           22 MSVFSG-FPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFL  100 (448)
T ss_dssp             CCTTTT-CCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHH
T ss_pred             hhHHhc-CCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHH
Confidence            444555 78889999999999999999999999999999999999999999999988876  234688999999999999


Q ss_pred             HHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      ++++++++|.+...+++++|+.                    +||.|||+|+.+++.++..+.| ||+|++++|+|++|.
T Consensus       101 ~~ia~~l~g~~~~~~~~~~i~~--------------------~~t~ggt~al~l~~~~~~~~~~-gd~Vlv~~p~~~~~~  159 (448)
T 3meb_A          101 EAAQFLMFGKDSKAAQEGRIAS--------------------CQSLSGTGSLHIGFEFLHLWMP-KAEFYMPSTTWPNHY  159 (448)
T ss_dssp             HHHHHHHHCTTCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHHHHHCT-TCCEEEESSCCTHHH
T ss_pred             HHHHHHhcCCCccccCcCcEEE--------------------EECCcHHHHHHHHHHHHHHhCC-CCEEEECCCCCHhHH
Confidence            9999999988765566788876                    8899999999997777777778 999999999999999


Q ss_pred             HHHh----hcCcc-------------------------------------------------------------------
Q psy16707        290 PICK----HTGLE-------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~----~aG~~-------------------------------------------------------------------  298 (420)
                      .+++    .+|++                                                                   
T Consensus       160 ~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li  239 (448)
T 3meb_A          160 GIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAF  239 (448)
T ss_dssp             HHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             HHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEE
Confidence            9999    66643                                                                   


Q ss_pred             -------------------------------------------------h--hh------------------------hh
Q psy16707        299 -------------------------------------------------K--IL------------------------IR  303 (420)
Q Consensus       299 -------------------------------------------------~--~~------------------------~r  303 (420)
                                                                       .  ..                        .|
T Consensus       240 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~  319 (448)
T 3meb_A          240 FDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIR  319 (448)
T ss_dssp             EEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHh
Confidence                                                             1  11                        24


Q ss_pred             hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCcccCCCCceEEecCCCH
Q psy16707        304 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK-----PWNHITDQIGMFCYTGLNA  378 (420)
Q Consensus       304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~-----~w~~i~~q~GmF~~~~l~~  378 (420)
                      ..+++||.+++.+++.+|++++++.+|.++++.|+++++++|+.|.+.|++.|.++     +|.++.++.|||+|.+++.
T Consensus       320 ~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  399 (448)
T 3meb_A          320 KTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTP  399 (448)
T ss_dssp             TTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCCH
T ss_pred             cccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCCH
Confidence            56788999999999999999999999999999999999999999999999998887     7999999999999999999


Q ss_pred             HHHHHHHHhCCeEEeC-CCcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        379 TQVEKLIKEHSVYLTK-DGRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       379 ~~v~~Ll~e~~Vy~~p-~gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      ++++.|++++||++.| +||||++++++++|++++++|.+++
T Consensus       400 ~~~~~ll~~~gV~v~~G~gRis~a~~~~~~i~~~~~~l~~~l  441 (448)
T 3meb_A          400 EHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDAV  441 (448)
T ss_dssp             HHHHHHHHHHCEEECSGGGEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEeCCCcEEEEecCCHHHHHHHHHHHHHHH
Confidence            9999999999999999 6899999999999999999999986

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1.7e-33  Score=284.86  Aligned_cols=271  Identities=35%  Similarity=0.640  Sum_probs=235.6

Q ss_pred             CCCcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHH
Q psy16707        128 GSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPD  207 (420)
Q Consensus       128 ~~~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~  207 (420)
                      +.-+|.++++ +..+++|+++.+.+.++++.++++|||++|.|+|+++.+++++.|++|.....++...+.|.|..|.++
T Consensus        18 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~   96 (420)
T 4f4e_A           18 GPGSMSLFSA-VELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAA   96 (420)
T ss_dssp             ----CCTTTT-CCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHH
T ss_pred             CccccCHhhc-CCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHH
Confidence            4455678888 999999999999999999999999999999999999999999999999888776546789999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707        208 FGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN  287 (420)
Q Consensus       208 fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n  287 (420)
                      ||+++++++.+.+...++++++.                    ++.|.|||+|+.+++.++..+.| ||+|++++|+|++
T Consensus        97 lr~~ia~~l~~~~~~~~~~~~~~--------------------i~~t~G~t~al~~~~~~~~~~~~-gd~Vlv~~p~~~~  155 (420)
T 4f4e_A           97 YDASVQKLLLGDDSPLIAAGRVV--------------------TAQALGGTGALKIGADFLRTLNP-KAKVAISDPSWEN  155 (420)
T ss_dssp             HHHHHHHHHHCTTCHHHHTTCEE--------------------EEEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCHH
T ss_pred             HHHHHHHHhcCCCccccccCceE--------------------EEECCccHHHHHHHHHHHHHhCC-CCEEEEeCCCcHh
Confidence            99999999988765434455222                    27899999999999776666778 9999999999999


Q ss_pred             cHHHHhhcCcc---------------------------------------------------------------------
Q psy16707        288 HIPICKHTGLE---------------------------------------------------------------------  298 (420)
Q Consensus       288 y~~i~~~aG~~---------------------------------------------------------------------  298 (420)
                      |..+++.+|++                                                                     
T Consensus       156 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De  235 (420)
T 4f4e_A          156 HRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDI  235 (420)
T ss_dssp             HHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Confidence            99999988874                                                                     


Q ss_pred             ---------------------------------------------------------------hhhhhhccCCCchHHHH
Q psy16707        299 ---------------------------------------------------------------KILIRAFYSSPPIHGAR  315 (420)
Q Consensus       299 ---------------------------------------------------------------~~~~r~~~s~pp~~ga~  315 (420)
                                                                                     ....|..++++|.+++.
T Consensus       236 ~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (420)
T 4f4e_A          236 AYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGA  315 (420)
T ss_dssp             SCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHH
T ss_pred             ccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHH
Confidence                                                                           01123578889999999


Q ss_pred             HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC
Q psy16707        316 IVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD  395 (420)
Q Consensus       316 iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~  395 (420)
                      +++.+|+++.++.+|.++++.++++++++|+.+.+.|++++.+..|.+..++.|||+|++++.+++..+++++||++.|+
T Consensus       316 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gI~v~~~  395 (420)
T 4f4e_A          316 IVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVST  395 (420)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTT
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCHHHHHHHHHhCCEEecCC
Confidence            99999999999999999999999999999999999999986544588888999999999999999999999999999999


Q ss_pred             CcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        396 GRISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 gRis~agl~~~ni~~la~AI~~vv~  420 (420)
                      +|||++++++++|++++++|.++++
T Consensus       396 ~Ris~~~~~~~~i~~~~~~l~~~l~  420 (420)
T 4f4e_A          396 GRICVAALNTRNLDVVANAIAAVLK  420 (420)
T ss_dssp             SEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred             CeEEEecCCHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999874

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=1.5e-31  Score=267.35  Aligned_cols=261  Identities=59%  Similarity=0.980  Sum_probs=230.8

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ++..++|+++.+.+.++++.++++|||++|.|.|..+.+++.+.|+++...+..+..+..|.+..|.++||+++++++.+
T Consensus         7 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~   86 (401)
T 7aat_A            7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALG   86 (401)
T ss_dssp             CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             CCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcC
Confidence            56677999999999999999999999999999999998899999999988876544688999999999999999999987


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHh-cCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-FFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .++..+++++|..                    ++|.|||+|+.+++..+.. +.| ||.|++++|+|++|..+++.+|+
T Consensus        87 ~~~~~~~~~~i~~--------------------v~t~G~~~al~~~~~~l~~~~~~-gd~Vlv~~p~~~~~~~~~~~~g~  145 (401)
T 7aat_A           87 ENSEAFKSGRYVT--------------------VQGISGTGSLRVGANFLQRFFKF-SRDVYLPKPSWGNHTPIFRDAGL  145 (401)
T ss_dssp             TTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHCTT-CCEEEEEESCCTTHHHHHHHTTC
T ss_pred             CCccccccCceEE--------------------EecCcchHHHHHHHHHHHHhccC-CCEEEEcCCCchhHHHHHHHcCC
Confidence            7666666777765                    6799999999998765542 357 99999999999999999988876


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       146 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~  225 (401)
T 7aat_A          146 QLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDI  225 (401)
T ss_dssp             EEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred             eeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCc
Confidence            4                                                                               


Q ss_pred             ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                            ....++.++++|..++.+++.+|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  305 (401)
T 7aat_A          226 NRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTP  305 (401)
T ss_dssp             HHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred             cccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCH
Confidence                                                                  11124457788899999998899999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccC
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVT  404 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~  404 (420)
                      +++.+|.++++.++++++++|+.|.+.|+++|.++.|.+..++.|+|.|.+++.++++.|++++||++.|++|||+++++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~~~Ris~~~~~  385 (401)
T 7aat_A          306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVA  385 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCHHHHHHHHHhCCEeccCCCeEEeccCC
Confidence            99999999999999999999999999999998777788888999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhC
Q psy16707        405 SKNVGYLAKAIHAVTK  420 (420)
Q Consensus       405 ~~ni~~la~AI~~vv~  420 (420)
                      +++|++++++|+++++
T Consensus       386 ~~~i~~~~~~l~~~~~  401 (401)
T 7aat_A          386 SSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             TTTHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHhC
Confidence            9999999999999875

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.97  E-value=2.4e-30  Score=260.14  Aligned_cols=267  Identities=40%  Similarity=0.691  Sum_probs=219.3

Q ss_pred             CCCcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHH
Q psy16707        128 GSLPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPD  207 (420)
Q Consensus       128 ~~~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~  207 (420)
                      |.|--.+.++ ++.+++|++|.+.+.++++.++++|||++|.|.|..+.+++.+.++++     .....+.|.|..|.++
T Consensus        10 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a-----~~~~~~~y~~~~g~~~   83 (409)
T 4eu1_A           10 GTLEAQTQGP-GSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA-----TLGTNMDYAPVTGIAS   83 (409)
T ss_dssp             ------------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC-----CCCSCCCCCCTTCCHH
T ss_pred             cchhhhHhhc-CCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc-----CccccccCCCCCCcHH
Confidence            4444445566 888999999999999999999999999999998888888888888877     2346789999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707        208 FGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN  287 (420)
Q Consensus       208 fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n  287 (420)
                      ||++++++++|.+...+++++|..                    ++|.||+|++.++..++..+.+.||.|++++|+|++
T Consensus        84 lr~~ia~~~~~~~~~~~~~~~i~~--------------------~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~  143 (409)
T 4eu1_A           84 FVEEAQKLCFGPTCAALRDGRIAS--------------------CQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPN  143 (409)
T ss_dssp             HHHHHHHHHHCSSCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTH
T ss_pred             HHHHHHHHHcCCCchhhccCceee--------------------eecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHh
Confidence            999999999887755455677765                    689999999998776554443338999999999999


Q ss_pred             cHHHHhhcCcc---------------------------------------------------------------------
Q psy16707        288 HIPICKHTGLE---------------------------------------------------------------------  298 (420)
Q Consensus       288 y~~i~~~aG~~---------------------------------------------------------------------  298 (420)
                      |..+++.+|++                                                                     
T Consensus       144 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De  223 (409)
T 4eu1_A          144 HESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDM  223 (409)
T ss_dssp             HHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEec
Confidence            99999988874                                                                     


Q ss_pred             ----------------------------------------------------------------hhhhhhccCCCchHHH
Q psy16707        299 ----------------------------------------------------------------KILIRAFYSSPPIHGA  314 (420)
Q Consensus       299 ----------------------------------------------------------------~~~~r~~~s~pp~~ga  314 (420)
                                                                                      ....+..++++|..++
T Consensus       224 ~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  303 (409)
T 4eu1_A          224 AYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGA  303 (409)
T ss_dssp             SCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred             cccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHH
Confidence                                                                            0112456778888999


Q ss_pred             HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeC
Q psy16707        315 RIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK  394 (420)
Q Consensus       315 ~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p  394 (420)
                      .++...|.+++++.+|.++++.++++++++|+.+.+.|++.|.++.|....++.|+|.|.+++.+++++|++++||++.|
T Consensus       304 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~p  383 (409)
T 4eu1_A          304 WVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQVELLRSEYHIYMTL  383 (409)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCHHHHHHHHHHHCEECCT
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCCHHHHHHHHHcCCEEEcC
Confidence            98988899988889999999999999999999999999999888889988899999999999999999999999999999


Q ss_pred             CCcEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        395 DGRISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       395 ~gRis~agl~~~ni~~la~AI~~vv~  420 (420)
                      ++||++++.++++|++++++|.++++
T Consensus       384 ~~Ri~~~~~~~~~i~~~~~~l~~~l~  409 (409)
T 4eu1_A          384 NGRAAVSGLNSTNVEYVSQAIHNVTK  409 (409)
T ss_dssp             TCEEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred             CCEEEEEecCHhhHHHHHHHHHHHhC
Confidence            99999999999999999999999875

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.97  E-value=5.9e-29  Score=247.47  Aligned_cols=260  Identities=39%  Similarity=0.645  Sum_probs=224.3

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHH-HHccCCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEI-VLNKNLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~-~~~~~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++..++|+++.+.+.+++|..+++|||++|.|.|+++.+++++.|++|... ...+...+.|.+..|.++||+++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~   84 (397)
T 3fsl_A            5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF   84 (397)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHh
Confidence            667889999999999999999999999999999999988888999999888 7755467899999999999999999997


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      +.....++++++                    +++.|.|||+|+.+++.++..+.| ||+|++++|+|++|...++.+|+
T Consensus        85 ~~~~~~~~~~~~--------------------~i~~t~g~~~a~~~~~~~~~~~~~-gd~vl~~~p~~~~~~~~~~~~g~  143 (397)
T 3fsl_A           85 GADHPVLKQQRV--------------------ATIQTLGGSGALKVGADFLKRYFP-ESGVWVSDPTWENHVAIFAGAGF  143 (397)
T ss_dssp             CTTCHHHHTTCE--------------------EEEEESHHHHHHHHHHHHHHHHCT-TCCEEEESSCCHHHHHHHHHTTC
T ss_pred             cCCcccccccce--------------------EEEEcCCcHHHHHHHHHHHHhcCC-CCeEEEeCCCchhHHHHHHHcCC
Confidence            765433345521                    126799999999999766655678 99999999999999999988876


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       144 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~  223 (397)
T 3fsl_A          144 EVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGME  223 (397)
T ss_dssp             CEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTT
T ss_pred             ceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcc
Confidence            4                                                                               


Q ss_pred             -----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChh
Q psy16707        299 -----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPK  325 (420)
Q Consensus       299 -----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~  325 (420)
                                                                           ....+..++++|..++.+++.+|.+++
T Consensus       224 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  303 (397)
T 3fsl_A          224 EDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEA  303 (397)
T ss_dssp             GGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHH
T ss_pred             cccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHH
Confidence                                                                 001135678889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCC
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTS  405 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~  405 (420)
                      +..+|.++++.++++++++|+.+.+.|++.+.+..|....++.|+|.|++++.+++..+++++||++.|++|||++.+++
T Consensus       304 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~Ris~~~~~~  383 (397)
T 3fsl_A          304 LKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNT  383 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTCEEEGGGCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEEEEecCH
Confidence            99889999999999999999999999999854334787888999999999999999888899999999999999999899


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      ++|+++.++|++++
T Consensus       384 ~~i~~~~~~l~~~l  397 (397)
T 3fsl_A          384 ANVQRVAKAFAAVM  397 (397)
T ss_dssp             TTHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHhhC
Confidence            99999999999874

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.97  E-value=1e-30  Score=269.06  Aligned_cols=125  Identities=36%  Similarity=0.661  Sum_probs=120.7

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      +..|++.++|++||+||.||+++|+.+|+||+|+++|++|++.|++|++.||..|++.|++++++++|+||++|.|||+|
T Consensus       290 ~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~  369 (420)
T 4h51_A          290 VKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSF  369 (420)
T ss_dssp             HHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEE
T ss_pred             HHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEe
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhC
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~  128 (420)
                      +|||++||+.|+ +||||++++||||+||||++||+|+|+||++|-
T Consensus       370 ~gls~e~v~~L~-e~~Vy~~~~gRis~Agl~~~ni~~~a~aI~~vv  414 (420)
T 4h51_A          370 LGLSKAQCEYCQ-NHNIFITVSGRANMAGLTHETALMLAQTINDAV  414 (420)
T ss_dssp             CCCCHHHHHHHH-HTTEECCTTCEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred             cCcCHHHHHHHH-hCCEEEcCCCEEEeccCCHHHHHHHHHHHHHHH
Confidence            999999999985 789999999999999999999999999999983

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.93  E-value=1.1e-24  Score=218.71  Aligned_cols=264  Identities=39%  Similarity=0.748  Sum_probs=213.3

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHH-HHccCCCCCCCCCCCCHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEI-VLNKNLDKEYAPIIGAPDFGKLA  212 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~-~~~~~~~~~Y~p~~G~~~fr~a~  212 (420)
                      +.++ +..+++|+++.+.+.++++.++++|||++|.|.|.++.+++++.|++|... .......+.|.|..|.+++|+++
T Consensus         4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~i   82 (412)
T 1yaa_A            4 LFNN-IELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNA   82 (412)
T ss_dssp             TTTT-CCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred             hhcc-CcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHH
Confidence            3455 788889999999999998888899999999999999988899999999888 76533467899999999999999


Q ss_pred             HHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        213 AQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       213 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      ++++.+..+..+++++|+.                    +||.|||+|+.+++.++..+.| ||+|++++|+|+.|...+
T Consensus        83 a~~~~~~~~~~~~~~~i~~--------------------~~t~g~~~a~~~~~~~~~~~~~-gd~Vl~~~p~~~~~~~~~  141 (412)
T 1yaa_A           83 AKIIFGTQSDALQEDRVIS--------------------VQSLSGTGALHISAKFFSKFFP-DKLVYLSKPTWANHMAIF  141 (412)
T ss_dssp             HHHHHCTTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCTTHHHHH
T ss_pred             HHHHhcCCCCCCCcceEEE--------------------EeccchHhHHHHHHHHHHHhCC-CCEEEEeCCCCccHHHHH
Confidence            9999775544445666654                    5699999999998665555668 999999999999999888


Q ss_pred             hhcCcc--------------------------------------------------------------------------
Q psy16707        293 KHTGLE--------------------------------------------------------------------------  298 (420)
Q Consensus       293 ~~aG~~--------------------------------------------------------------------------  298 (420)
                      +..|++                                                                          
T Consensus       142 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~  221 (412)
T 1yaa_A          142 ENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGF  221 (412)
T ss_dssp             HTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred             HHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence            877653                                                                          


Q ss_pred             ---------------------------------------------h--h------------h-------hhhccCCCchH
Q psy16707        299 ---------------------------------------------K--I------------L-------IRAFYSSPPIH  312 (420)
Q Consensus       299 ---------------------------------------------~--~------------~-------~r~~~s~pp~~  312 (420)
                                                                   .  .            +       .+..++++|..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  301 (412)
T 1yaa_A          222 ATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAY  301 (412)
T ss_dssp             SSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHH
T ss_pred             cCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChH
Confidence                                                         0  0            0       00112233444


Q ss_pred             HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEE
Q psy16707        313 GARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYL  392 (420)
Q Consensus       313 ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~  392 (420)
                      ++.++...|++.++..+|.++++.++++++++|+.+.+.|++.+.++.|..+.++.|+|.|.+++.+++..+++++||++
T Consensus       302 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v  381 (412)
T 1yaa_A          302 GAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYL  381 (412)
T ss_dssp             HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEEC
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCHHHHHHHHHhCCEEe
Confidence            55555555655555555778899999999999999999999987544477778899999999999888888989999999


Q ss_pred             eCCCcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        393 TKDGRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       393 ~p~gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      .|..|||++.++.++++++.+++.+++
T Consensus       382 ~~~~Ris~~~~~~~~i~~~~~~l~~~~  408 (412)
T 1yaa_A          382 VASGRASIAGLNQGNVEYVAKAIDEVV  408 (412)
T ss_dssp             CTTSEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             ccCcEEEEccCCHhHHHHHHHHHHHHH
Confidence            999999999889999999999999875

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.93  E-value=6.8e-25  Score=218.05  Aligned_cols=260  Identities=38%  Similarity=0.637  Sum_probs=201.7

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+++++++.+...++++.+++.|||++|.|.|+++.+++++.|++|......+...+.|.|..|.++||+++++++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~   84 (396)
T 2q7w_A            5 ITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFG   84 (396)
T ss_dssp             CCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             cccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhc
Confidence            56788899999998888877788999999999999998888899999888765433567899999999999999999966


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .....+++++|..                    ++|.|||+|+.+++.++..+.| ||.|++++|+|+.|...++..|++
T Consensus        85 ~~~~~~~~~~v~~--------------------~~~~g~~~a~~~~~~~~~~~~~-gd~Vl~~~p~y~~~~~~~~~~g~~  143 (396)
T 2q7w_A           85 KGSALINDKRART--------------------AQTPGGTGALRVAADFLAKNTS-VKRVWVSNPSWPNHKSVFNSAGLE  143 (396)
T ss_dssp             TTCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHHHHHSC-CCEEEEEESCCTHHHHHHHHTTCE
T ss_pred             CCCCccccccEEE--------------------EecccchhhHHHHHHHHHHhCC-CCEEEEcCCCchhHHHHHHHcCCc
Confidence            5443344566643                    3599999999999876655668 999999999999999988877663


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       144 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~  223 (396)
T 2q7w_A          144 VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE  223 (396)
T ss_dssp             EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH
T ss_pred             eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence                                                                                            


Q ss_pred             ------------------------------------h---------hhh-------hhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 ------------------------------------K---------ILI-------RAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 ------------------------------------~---------~~~-------r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                          .         .+.       +..+++++..++.++...|++.++
T Consensus       224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l  303 (396)
T 2q7w_A          224 DAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL  303 (396)
T ss_dssp             HTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHH
T ss_pred             hhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhh
Confidence                                                1         011       245667788888888888988778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK  406 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~  406 (420)
                      +..|.+.++.++++++++|+.+.+.|++.|.++.|....++.|+|.|.+++.+++..+++++||++.|+.|||++..+.+
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~e  383 (396)
T 2q7w_A          304 RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPD  383 (396)
T ss_dssp             HHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCHHHHHHHHHhcCeeecCCceEEEeecCHH
Confidence            78888899999999999999999999998754447767788999999999888888888999999999999999988999


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      +++++.++|.+++
T Consensus       384 ~i~~~~~~l~~~l  396 (396)
T 2q7w_A          384 NMAPLCEAIVAVL  396 (396)
T ss_dssp             THHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999874

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.93  E-value=3.6e-24  Score=214.64  Aligned_cols=264  Identities=42%  Similarity=0.772  Sum_probs=217.7

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLA  212 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~  212 (420)
                      +.++ +..+++++++.+.+.++++.++++|||++|.|.|+++.+++++.|++|......+ ...+.|.|..|.++||+++
T Consensus         5 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   83 (412)
T 1ajs_A            5 VFAE-VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA   83 (412)
T ss_dssp             TTTT-CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred             hhhh-CcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence            3444 7788899999999999988788999999999999998888889999998887632 2467899999999999999


Q ss_pred             HHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC-----CEEEEcCCCCCC
Q psy16707        213 AQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-----KVIYVPTPTWGN  287 (420)
Q Consensus       213 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-----d~VlvpdP~w~n  287 (420)
                      ++++.+..+..+.+++|..                    ++|.|||+|+.+++.++..+.| |     |.|++++|+|+.
T Consensus        84 a~~~~~~~~~~~~~~~v~~--------------------~~t~gg~~a~~~~~~~~~~~~~-g~~~~~d~Vl~~~p~y~~  142 (412)
T 1ajs_A           84 SRLALGDDSPALQEKRVGG--------------------VQSLGGTGALRIGAEFLARWYN-GTNNKDTPVYVSSPTWEN  142 (412)
T ss_dssp             HHHHHCTTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHSS-SSSCCCSCEEEEESCCTH
T ss_pred             HHHHhcCCCCccCCCcEEE--------------------EECCCcHHHHHHHHHHHHHhCc-CcCCCCCeEEEcCCCcHH
Confidence            9999776544445666654                    5699999999999765555667 8     999999999999


Q ss_pred             cHHHHhhcCcc---------------------------------------------------------------------
Q psy16707        288 HIPICKHTGLE---------------------------------------------------------------------  298 (420)
Q Consensus       288 y~~i~~~aG~~---------------------------------------------------------------------  298 (420)
                      |...++..|++                                                                     
T Consensus       143 ~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D  222 (412)
T 1ajs_A          143 HNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFD  222 (412)
T ss_dssp             HHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence            99887765531                                                                     


Q ss_pred             -------------------------------------------------h---h------h-------hhhccCCCchHH
Q psy16707        299 -------------------------------------------------K---I------L-------IRAFYSSPPIHG  313 (420)
Q Consensus       299 -------------------------------------------------~---~------~-------~r~~~s~pp~~g  313 (420)
                                                                       .   .      +       .+..+++++..+
T Consensus       223 e~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (412)
T 1ajs_A          223 SAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQG  302 (412)
T ss_dssp             ESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHH
T ss_pred             cccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHH
Confidence                                                             1   0      1       223466667777


Q ss_pred             HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEe
Q psy16707        314 ARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLT  393 (420)
Q Consensus       314 a~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~  393 (420)
                      +.++...|.+.++..+|.++++.++++++++|+.+.+.|++++.|..|..+.++.|+|.|.+++.+++..+++++||++.
T Consensus       303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~  382 (412)
T 1ajs_A          303 ARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLL  382 (412)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECC
T ss_pred             HHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCCHHHHHHHHHhCCEEec
Confidence            87777778776556668888999999999999999999999876655777778899999999988888888899999999


Q ss_pred             CCCcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        394 KDGRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       394 p~gRis~agl~~~ni~~la~AI~~vv  419 (420)
                      |++|||++.++.++++++.+++.+++
T Consensus       383 ~~~Ris~~~~~~~~i~~~~~~l~~~l  408 (412)
T 1ajs_A          383 PSGRINMCGLTTKNLDYVATSIHEAV  408 (412)
T ss_dssp             TTSEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             CCcEEEeeeCCHHHHHHHHHHHHHHH
Confidence            99999999889999999999998875

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.93  E-value=2.1e-24  Score=214.71  Aligned_cols=256  Identities=31%  Similarity=0.593  Sum_probs=214.8

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..+++++++.+.+.++++.++++|||++|.|.|+++.+++++.|++|...+..+...+.|.+..|.++||+++++++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~   84 (394)
T 2ay1_A            5 LKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILG   84 (394)
T ss_dssp             CCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHG
T ss_pred             CccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhC
Confidence            67888999999999999888889999999999999998888999999988775433567899999999999999999866


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+   +++++|+.                    ++|.|||+|+.+++..+..+.| ||.|++++|+|+.|...++..|++
T Consensus        85 ~~---~~~~~v~~--------------------~~~~g~~~a~~~~~~~~~~~~~-gd~vl~~~p~~~~~~~~~~~~g~~  140 (394)
T 2ay1_A           85 DG---LKSETTAT--------------------LATVGGTGALRQALELARMANP-DLRVFVSDPTWPNHVSIMNFMGLP  140 (394)
T ss_dssp             GG---CCGGGEEE--------------------EEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCHHHHHHHHHHTCC
T ss_pred             CC---CCcccEEE--------------------EecCCchhHHHHHHHHHHhcCC-CCEEEEcCCCChhHHHHHHHcCCc
Confidence            42   13556643                    4699999999999877665667 899999999999999888877653


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       141 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  220 (394)
T 2ay1_A          141 VQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEE  220 (394)
T ss_dssp             EEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHH
T ss_pred             eEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCccc
Confidence                                                                                            


Q ss_pred             ------------------------------------h--h--------------hhhhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 ------------------------------------K--I--------------LIRAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 ------------------------------------~--~--------------~~r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                          .  .              ..+..+++++..++.++...|.+.++
T Consensus       221 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l  300 (394)
T 2ay1_A          221 DAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPEL  300 (394)
T ss_dssp             HHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHH
T ss_pred             chHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHH
Confidence                                                1  0              11245666677788888888887777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK  406 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~  406 (420)
                      +..|.+.++.++++++++|+.+.+.|++.|.++.|....++.|+|.|..++.+++..+++++||++.|+.|||++.++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~  380 (394)
T 2ay1_A          301 RADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDN  380 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCHHHHHHHHHhCCEEecCCCeEEeecCCHh
Confidence            77888889999999999999999999988754447767778899999999888888888999999999999999988999


Q ss_pred             CHHHHHHHHHHH
Q psy16707        407 NVGYLAKAIHAV  418 (420)
Q Consensus       407 ni~~la~AI~~v  418 (420)
                      +++++.++|+++
T Consensus       381 ~i~~~~~~l~~~  392 (394)
T 2ay1_A          381 TIPILARAIIEV  392 (394)
T ss_dssp             THHHHHHHHHHH
T ss_pred             hHHHHHHHHHHc
Confidence            999999999886

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.91  E-value=9.5e-24  Score=212.26  Aligned_cols=253  Identities=22%  Similarity=0.248  Sum_probs=203.0

Q ss_pred             hhhhccccCCChHHHHHHHHHccCCC----CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707        135 QDARTSSVKVPSSNLLTEAFKKDTNV----NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK  210 (420)
Q Consensus       135 ~~~~~~~~~~d~i~~l~~~~~~d~~~----~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~  210 (420)
                      +.+ .....+|++|.+.+.++++...    ++|||++|.|.|+++.+++++.|++|...+.. ...+.|.|..|.++||+
T Consensus        10 ~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~y~~~~g~~~lr~   87 (418)
T 3rq1_A           10 KHA-KGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD-SEHVGYAPIAGIPDFLC   87 (418)
T ss_dssp             TTT-TTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH-HHHHSCCCTTCCHHHHH
T ss_pred             hhc-CCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcc-cccCCCCCCCChHHHHH
Confidence            444 5677789999999998877754    89999999999999999999999998766532 23568999999999999


Q ss_pred             HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      ++++++.+.+++.. +..                      ++.|.|||+|+.+++..+  +.| ||+|++++|+|++|..
T Consensus        88 ~ia~~~~~~~~~~~-~~~----------------------i~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~p~~~~~~~  141 (418)
T 3rq1_A           88 AAEKECFGNFRPEG-HIR----------------------SIATAGGTGGIHHLIHNY--TEP-GDEVLTADWYWGAYRV  141 (418)
T ss_dssp             HHHHHHHGGGCCSS-EEE----------------------EEEESHHHHHHHHHHHHH--SCT-TCEEEEESSCCTHHHH
T ss_pred             HHHHHHhcccCccc-ccc----------------------EEECCchHHHHHHHHHHh--cCC-CCEEEECCCCchhHHH
Confidence            99999977553321 112                      378999999999998755  557 9999999999999998


Q ss_pred             HHhhcCcc------------------------------------------------------------h-----------
Q psy16707        291 ICKHTGLE------------------------------------------------------------K-----------  299 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------~-----------  299 (420)
                      +++.+|++                                                            .           
T Consensus       142 ~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~  221 (418)
T 3rq1_A          142 ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVI  221 (418)
T ss_dssp             HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred             HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeE
Confidence            87776654                                                            0           


Q ss_pred             -----------------------------------------------------------------------hhhhhccCC
Q psy16707        300 -----------------------------------------------------------------------ILIRAFYSS  308 (420)
Q Consensus       300 -----------------------------------------------------------------------~~~r~~~s~  308 (420)
                                                                                             ...+..|++
T Consensus       222 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (418)
T 3rq1_A          222 IGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSN  301 (418)
T ss_dssp             EEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCC
Confidence                                                                                   001122345


Q ss_pred             CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-CHHHHHHHHHh
Q psy16707        309 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLIKE  387 (420)
Q Consensus       309 pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~~~~v~~Ll~e  387 (420)
                      ++..++.++..+|.++++.+.|.++++.++++++++|+.+.+.|+++|    |..+.++.|+|.|..+ +.+.+..++++
T Consensus       302 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~  377 (418)
T 3rq1_A          302 ICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG----LPMLPYRGGFFITIPTDSANAICEELKK  377 (418)
T ss_dssp             CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCCSSSEEEEECTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCceEEEEcCCCCHHHHHHHHHh
Confidence            666777777777888777778999999999999999999999999987    6778889999999755 44445445689


Q ss_pred             CCeEEeCCC---cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        388 HSVYLTKDG---RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       388 ~~Vy~~p~g---Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +||++.|++   |||++++++++++++.++|.+++
T Consensus       378 ~gi~v~~g~~~iRis~~~~~~~~i~~~~~~l~~~l  412 (418)
T 3rq1_A          378 EHIYVIALANGIRIAACGIPKCQMTGLAEKIYNAM  412 (418)
T ss_dssp             TTEECEECSSEEEEEGGGSCHHHHTTHHHHHHHHH
T ss_pred             CCEEEecCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            999999986   99999889999999999998875

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.90  E-value=3.5e-23  Score=210.10  Aligned_cols=244  Identities=18%  Similarity=0.169  Sum_probs=182.6

Q ss_pred             ccccCCChHHHHHHHHHccCCCCc--eeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNK--INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~k--InL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      ....+.|||+.+.+.+++++++++  |||++|. .+++|.+++++.|++|......+...+.|.|..|.++||+++++++
T Consensus        31 ~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~-~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~  109 (427)
T 3dyd_A           31 MAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGD-PTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYY  109 (427)
T ss_dssp             ----------------CCCCCTTSCCEECCCSC-TTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHH
T ss_pred             HhhcccchHHHHHHHHhhcccCCCCEEeCCCcC-CCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHH
Confidence            455568899999999999987766  9999998 4556778999999999888776545679999999999999999998


Q ss_pred             cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      .+. +..+.+++|                      +.|.|||+|+.+++.++  +.| ||+|++++|+|++|..+++.+|
T Consensus       110 ~~~-~~~~~~~~v----------------------~~t~g~t~al~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~g  163 (427)
T 3dyd_A          110 HCP-EAPLEAKDV----------------------ILTSGCSQAIDLCLAVL--ANP-GQNILVPRPGFSLYKTLAESMG  163 (427)
T ss_dssp             CBT-TBCCCGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHHHHHTT
T ss_pred             hhc-CCCCChHHE----------------------EEecCcHHHHHHHHHHh--cCC-CCEEEEcCCCchhHHHHHHHcC
Confidence            765 333445545                      67999999999999876  347 9999999999999999999988


Q ss_pred             cc------------------------------------------------------------------------------
Q psy16707        297 LE------------------------------------------------------------------------------  298 (420)
Q Consensus       297 ~~------------------------------------------------------------------------------  298 (420)
                      ++                                                                              
T Consensus       164 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~  243 (427)
T 3dyd_A          164 IEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKY  243 (427)
T ss_dssp             CEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCC
T ss_pred             CEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcC
Confidence            75                                                                              


Q ss_pred             ----------------------------------h--------hhh------hhccCCCchHHHHHHHHHhCChhhHHHH
Q psy16707        299 ----------------------------------K--------ILI------RAFYSSPPIHGARIVQEILGDPKLKAQW  330 (420)
Q Consensus       299 ----------------------------------~--------~~~------r~~~s~pp~~ga~iv~~IL~dp~L~~~w  330 (420)
                                                        .        .+.      .....+++.+++.++..+|++.  ..+ 
T Consensus       244 ~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~--~~~-  320 (427)
T 3dyd_A          244 EPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRT--PGE-  320 (427)
T ss_dssp             CCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHS--CHH-
T ss_pred             ccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc--CHH-
Confidence                                              1        111      1124677888998888877531  133 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC----------HHHHHHHHHhCCeEEeCCC---
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN----------ATQVEKLIKEHSVYLTKDG---  396 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~----------~~~v~~Ll~e~~Vy~~p~g---  396 (420)
                        .++.++++++++|+.+.+.|+++ |    |.++.++.|||.|+.++          .+++++|++++||++.|+.   
T Consensus       321 --~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~  394 (427)
T 3dyd_A          321 --FYHNTLSFLKSNADLCYGALAAIPG----LRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE  394 (427)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHSTT----EEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhcCCC----ceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC
Confidence              35566799999999999999987 4    77788899999996543          4677899889999999863   


Q ss_pred             -----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        397 -----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                           |||++ .++++|++.+++|.+++
T Consensus       395 ~~~~iRis~~-~~~e~i~~~l~~l~~~l  421 (427)
T 3dyd_A          395 YPNFIRVVIT-VPEVMMLEACSRIQEFC  421 (427)
T ss_dssp             CTTEEEEESC-SCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEEC-CCHHHHHHHHHHHHHHH
Confidence                 99997 89999999999998875

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.83  E-value=1.5e-19  Score=188.41  Aligned_cols=268  Identities=13%  Similarity=0.145  Sum_probs=204.8

Q ss_pred             HHHHHHHHHhh-----CCCccc----chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHH
Q psy16707        117 VGYLAKAIHAN-----GSLPIR----FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQAD  187 (420)
Q Consensus       117 i~~va~ai~~v-----~~~p~~----~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~  187 (420)
                      |-..|+.+.+-     |.+|..    ..-.....+..+|+..+.+.+..+..+++||++.|      +.+++.++++++.
T Consensus        43 ~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~------~~~~p~~~~~~a~  116 (500)
T 3tcm_A           43 IVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEI------KTLFSADSISRAK  116 (500)
T ss_dssp             HHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTH------HHHSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCC------cccCCHHHHHHHH
Confidence            44456666665     776632    11111123556788888888888889999999998      4567888888887


Q ss_pred             HHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHH
Q psy16707        188 EIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGA  265 (420)
Q Consensus       188 ~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~  265 (420)
                      +.+....  ....|.+..|.++||+++++++...++..++++.|                      +.|.||++++.+++
T Consensus       117 ~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i----------------------~~t~G~~~al~~~~  174 (500)
T 3tcm_A          117 QILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDI----------------------FLTDGASPGVHLMM  174 (500)
T ss_dssp             HHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGE----------------------EEESSSHHHHHHHH
T ss_pred             HHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccE----------------------EEcCCHHHHHHHHH
Confidence            7665432  56799999999999999999985333222345555                      67999999999998


Q ss_pred             HHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----------------------------------------------
Q psy16707        266 AFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-----------------------------------------------  298 (420)
Q Consensus       266 ~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-----------------------------------------------  298 (420)
                      ..+. ..| ||.|++++|+|++|...++.+|++                                               
T Consensus       175 ~~l~-~~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~  252 (500)
T 3tcm_A          175 QLLI-RNE-KDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQ  252 (500)
T ss_dssp             HHHC-CST-TEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCC
T ss_pred             HHHc-CCC-CCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcc
Confidence            7652 147 999999999999999999888774                                               


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       253 ~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~  332 (500)
T 3tcm_A          253 VLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEI  332 (500)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEE
Confidence                                                                                            


Q ss_pred             ----------hhhhhhccCCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcc
Q psy16707        299 ----------KILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNH  363 (420)
Q Consensus       299 ----------~~~~r~~~s~pp~~ga~iv~~IL~dp----~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~  363 (420)
                                ....++..++++..++.++..+|++|    .+..+|.++++.++++++++|+.+.+.|+++ |    |.+
T Consensus       333 ~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g----~~~  408 (500)
T 3tcm_A          333 TGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEG----ITC  408 (500)
T ss_dssp             ESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT----EEC
T ss_pred             eCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----cEE
Confidence                      00012345677888999888888754    3666799999999999999999999999987 4    778


Q ss_pred             cCCCCceEEec--CCCHH---------------HHHHHHHhCCeEEeCC-------C----cEEEcccCCCCHHHHHHHH
Q psy16707        364 ITDQIGMFCYT--GLNAT---------------QVEKLIKEHSVYLTKD-------G----RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       364 i~~q~GmF~~~--~l~~~---------------~v~~Ll~e~~Vy~~p~-------g----Ris~agl~~~ni~~la~AI  415 (420)
                      ..+++|||.|.  .+++.               ++.++++++||++.|+       |    |||++ .+.++++++.++|
T Consensus       409 ~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l  487 (500)
T 3tcm_A          409 NEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRF  487 (500)
T ss_dssp             CCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHH
T ss_pred             ecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHH
Confidence            89999999994  44332               2568889999999974       2    99999 9999999999999


Q ss_pred             HHHh
Q psy16707        416 HAVT  419 (420)
Q Consensus       416 ~~vv  419 (420)
                      .+++
T Consensus       488 ~~~~  491 (500)
T 3tcm_A          488 TVFH  491 (500)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.78  E-value=1.9e-17  Score=167.97  Aligned_cols=246  Identities=13%  Similarity=0.139  Sum_probs=178.9

Q ss_pred             cccchhhhccccCCChHH-HH---HHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCC
Q psy16707        131 PIRFQDARTSSVKVPSSN-LL---TEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAP  201 (420)
Q Consensus       131 p~~~~~~~~~~~~~d~i~-~l---~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p  201 (420)
                      +..+++. +..+++...| .+   ...+.. .++.++|||++|.   +  ..+.++.|.+|......+    ...+.|.|
T Consensus        36 ~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~--~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~  109 (449)
T 3qgu_A           36 DVQRNEN-FGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGD---T--TEPLPKYIADAMAKAAAGLATREGYSGYGA  109 (449)
T ss_dssp             CCCCCHH-HHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCC---C--CCCCCHHHHHHHHHHHHGGGGSCCCCCSTT
T ss_pred             chhhhHH-HHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCC---C--CCCCCHHHHHHHHHHHHhhccccCCCCCCC
Confidence            3344444 5555654333 33   333332 4567899999994   3  345677777776665542    35679999


Q ss_pred             CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707        202 IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP  281 (420)
Q Consensus       202 ~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp  281 (420)
                      ..|.++|++++++++.  .+..++++.|                      +.|.|+++++.++.. +  +.| ||.|+++
T Consensus       110 ~~g~~~lr~~ia~~~~--~g~~~~~~~i----------------------~~t~G~~~al~~~~~-l--~~~-gd~Vl~~  161 (449)
T 3qgu_A          110 EQGQGALREAVASTFY--GHAGRAADEI----------------------FISDGSKCDIARIQM-M--FGS-KPTVAVQ  161 (449)
T ss_dssp             TTCCHHHHHHHHHHHH--TTTTCCGGGE----------------------EEESCHHHHHHHHHH-H--HCS-SSCEEEE
T ss_pred             CCCcHHHHHHHHHHHH--cCCCCCHHHE----------------------EEccCHHHHHHHHHH-H--hCC-CCEEEEc
Confidence            9999999999999986  2222344545                      669999999998843 3  347 9999999


Q ss_pred             CCCCCCcHHHHhhcCc------------c---------------------------------------------------
Q psy16707        282 TPTWGNHIPICKHTGL------------E---------------------------------------------------  298 (420)
Q Consensus       282 dP~w~ny~~i~~~aG~------------~---------------------------------------------------  298 (420)
                      +|+|++|...++.+|+            .                                                   
T Consensus       162 ~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~  241 (449)
T 3qgu_A          162 DPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN  241 (449)
T ss_dssp             ESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred             CCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence            9999999999887762            1                                                   


Q ss_pred             --------------------------------------------------------hhh---------------hhhccC
Q psy16707        299 --------------------------------------------------------KIL---------------IRAFYS  307 (420)
Q Consensus       299 --------------------------------------------------------~~~---------------~r~~~s  307 (420)
                                                                              ..+               ....++
T Consensus       242 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (449)
T 3qgu_A          242 GSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFN  321 (449)
T ss_dssp             TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCC
T ss_pred             CcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccC
Confidence                                                                    111               123456


Q ss_pred             CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHH
Q psy16707        308 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEK  383 (420)
Q Consensus       308 ~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~  383 (420)
                      +++..++.++..+|.+.     ..++++.++++++++|+.|.+.|++.|    |....++.|+|.|+.++    .++++.
T Consensus       322 ~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (449)
T 3qgu_A          322 GASNIVQAGGLACLQPE-----GLKEMNAMIKFYKENAQILKTTFTEMG----FSVYGGDDAPYIWVGFPGKPSWDVFAE  392 (449)
T ss_dssp             CCCHHHHHHHHHHTSHH-----HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCEEESSSSSEEEEECTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhhc-----CHHHHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCeeEEEEECCCCCHHHHHHH
Confidence            78888888777767642     225677788999999999999999987    77777888999997653    456788


Q ss_pred             HHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        384 LIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       384 Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                      |++++||++.|+        +  |||+++ +.++|+++.++|.++++
T Consensus       393 l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~  438 (449)
T 3qgu_A          393 ILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYG  438 (449)
T ss_dssp             HHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC
T ss_pred             HHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence            988999999875        2  999875 88999999999998764

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.77  E-value=1.8e-17  Score=165.17  Aligned_cols=245  Identities=17%  Similarity=0.193  Sum_probs=177.0

Q ss_pred             chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      ++++ +..++.++++.+...+++.  ..++.|||+.|.   ++  +++++.|.++......+ ....|.+..|.++||++
T Consensus         4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~   76 (385)
T 1b5p_A            4 LSRR-VQAMKPSATVAVNAKALELRRQGVDLVALTAGE---PD--FDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREA   76 (385)
T ss_dssp             CCHH-HHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHH
T ss_pred             hhhH-HhhcCcchHHHHHHHHHHHHhcCCCEEEecCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence            4455 7778889998888776554  246789999996   33  34567777776665543 34689999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+..+++++|                      +.|.|||+|+.+++..+  +.| ||.|++++|+|+.|...
T Consensus        77 ia~~~~~~~g~~~~~~~i----------------------~~t~g~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~  131 (385)
T 1b5p_A           77 LAEKFRRENGLSVTPEET----------------------IVTVGGSQALFNLFQAI--LDP-GDEVIVLSPYWVSYPEM  131 (385)
T ss_dssp             HHHHHHHTTCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHH
T ss_pred             HHHHHHHHhCCCCChHHE----------------------EEcCChHHHHHHHHHHh--cCC-CCEEEEcCCCchhHHHH
Confidence            999994333222345555                      67999999999998755  457 99999999999999999


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       132 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~  211 (385)
T 1b5p_A          132 VRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY  211 (385)
T ss_dssp             HHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS
T ss_pred             HHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence            8877764                                                                         


Q ss_pred             ---------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707        299 ---------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTE  333 (420)
Q Consensus       299 ---------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e  333 (420)
                                                                   .........+++..++.++...|.+++..   .++
T Consensus       212 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~---~~~  288 (385)
T 1b5p_A          212 EGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEAS---RAF  288 (385)
T ss_dssp             SSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHH---HHH
T ss_pred             CCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcc---hHH
Confidence                                                         01111223456667777666656432111   244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CHH-HHHHHHHhCCeEEeCC------C--cEE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NAT-QVEKLIKEHSVYLTKD------G--RIS  399 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~~-~v~~Ll~e~~Vy~~p~------g--Ris  399 (420)
                      ++.++++++++|+.+.+.|+++|    |....++.|+|.|..+     +.+ +++.|+ ++||++.|+      +  |||
T Consensus       289 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis  363 (385)
T 1b5p_A          289 VEMAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLS  363 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEE
Confidence            67778999999999999999886    6667788899988543     444 557776 999999885      2  999


Q ss_pred             EcccCCCCHHHHHHHHHHHh
Q psy16707        400 MAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       400 ~agl~~~ni~~la~AI~~vv  419 (420)
                      ++ .+.++++...++|.+++
T Consensus       364 ~~-~~~~~i~~~l~~l~~~l  382 (385)
T 1b5p_A          364 YA-TSEENLRKALERFARVL  382 (385)
T ss_dssp             CC-SCHHHHHHHHHHGGGGC
T ss_pred             ec-CCHHHHHHHHHHHHHHH
Confidence            98 67777777777776654

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.77  E-value=5.4e-19  Score=180.38  Aligned_cols=123  Identities=36%  Similarity=0.642  Sum_probs=118.0

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCCccccccccc
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ----KEGSNKPWNHITDQIGM   79 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~----~~~~~~~w~~i~~Q~Gm   79 (420)
                      ..+++.+.|..||+||.+++++++.+|+++++..+|.++++.|+++++..|..|++.|+    +.+.+++|.++..|.||
T Consensus       275 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~  354 (405)
T 3k7y_A          275 FNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGL  354 (405)
T ss_dssp             HHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSS
T ss_pred             HHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceE
Confidence            45677788999999999999999999999999999999999999999999999999999    89989999999999999


Q ss_pred             eeecCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         80 FCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        80 Fs~~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      |.+++|+++++++| ++++||++++||||+||++++||++++++|+++
T Consensus       355 f~~~~l~~~~~~~L-~~~gV~v~p~~Ris~a~~~~~~i~~~~~~i~~~  401 (405)
T 3k7y_A          355 FSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADKICLS  401 (405)
T ss_dssp             EEECGGGGGGTTTT-TTTTEECCTTSEEEGGGCCTTHHHHHHHHHHHH
T ss_pred             EEecCCCHHHHHHH-HHCCEeecCCCeEEEeccCHHHHHHHHHHHHHH
Confidence            99999999999999 999999999999999999999999999999987

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.74  E-value=1.1e-17  Score=167.57  Aligned_cols=247  Identities=14%  Similarity=0.117  Sum_probs=181.1

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCC-CCCCCCCCCCHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL-DKEYAPIIGAPDFGKLA  212 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~-~~~Y~p~~G~~~fr~a~  212 (420)
                      ++++ +..++.+++..+.+.+..   +++|||+.|.   +  .+++++.|.+|......+.. .+.|.+..|.+++|+++
T Consensus         6 ~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~g~---~--~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   76 (422)
T 3fvs_A            6 QARR-LDGIDYNPWVEFVKLASE---HDVVNLGQGF---P--DFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKIL   76 (422)
T ss_dssp             SCGG-GTTCCCCHHHHHHHHHHT---SCCEECCCSS---C--SSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHH
T ss_pred             HHHH-hhccCccHHHHHHHHhhc---CCceEeCCCC---C--CCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHH
Confidence            4555 778888998888776643   5899999996   3  34677888888777665422 37999999999999999


Q ss_pred             HHHHcCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        213 AQLAYGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       213 ~~~~~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      ++++....+..+++ +.|                      +.|.|||+++.+++..+  +.| ||+|++++|+|+.|...
T Consensus        77 a~~~~~~~g~~~~~~~~i----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~  131 (422)
T 3fvs_A           77 ASFFGELLGQEIDPLRNV----------------------LVTVGGYGALFTAFQAL--VDE-GDEVIIIEPFFDCYEPM  131 (422)
T ss_dssp             HHHHHHHHTCCCCHHHHE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHH
T ss_pred             HHHHHHhhCCCCCCCCcE----------------------EEECChHHHHHHHHHHH--cCC-CCEEEEcCCCchhhHHH
Confidence            99984322212233 344                      67999999999988755  457 99999999999999988


Q ss_pred             HhhcCc-------------------------c------------------------------------------------
Q psy16707        292 CKHTGL-------------------------E------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~-------------------------~------------------------------------------------  298 (420)
                      ++..|+                         .                                                
T Consensus       132 ~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  211 (422)
T 3fvs_A          132 TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCI  211 (422)
T ss_dssp             HHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             HHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEE
Confidence            876542                         1                                                


Q ss_pred             ----------------------------------------------------------hhhhhhccCCCchHHHHHHHHH
Q psy16707        299 ----------------------------------------------------------KILIRAFYSSPPIHGARIVQEI  320 (420)
Q Consensus       299 ----------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~I  320 (420)
                                                                                ....+....+++..++.++...
T Consensus       212 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  291 (422)
T 3fvs_A          212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAES  291 (422)
T ss_dssp             EECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             EEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHH
Confidence                                                                      1111222345566777766665


Q ss_pred             hCChhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH------------------HHH
Q psy16707        321 LGDPKLK-AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------------------TQV  381 (420)
Q Consensus       321 L~dp~L~-~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~------------------~~v  381 (420)
                      |.++... ..|.+.++.++++++++|+.+.+.|++.|    |..+.++.|+|.|+.++.                  +++
T Consensus       292 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (422)
T 3fvs_A          292 FEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFV  367 (422)
T ss_dssp             HHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHH
T ss_pred             HhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEechhhcccccccccccccccHHHHH
Confidence            5421110 12345567778999999999999999987    677788999999975532                  567


Q ss_pred             HHHHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        382 EKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       382 ~~Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      ++|++++||++.||             +  |||++. +.++|+...++|.+++
T Consensus       368 ~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~l  419 (422)
T 3fvs_A          368 KWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKWK  419 (422)
T ss_dssp             HHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence            88889999999873             2  999986 8899999999988875

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.74  E-value=1.1e-17  Score=166.80  Aligned_cols=241  Identities=14%  Similarity=0.077  Sum_probs=174.6

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      +..++++++..+.+.+   .++++|||+.|.   +  .+++++.|.+|......+...+.|.+..|.+++++++++++..
T Consensus         5 ~~~~~~~~~~~~~~~~---~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~   76 (410)
T 3e2y_A            5 IEGLDSNVWVEFTKLA---ADPSVVNLGQGF---P--DISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGK   76 (410)
T ss_dssp             GTTCCCCHHHHTTTTT---TSTTSEECSSCC---C--CSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hccCCccHHHHHHHHh---cCCCeEEecCCC---C--CCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHH
Confidence            5667777777665433   346899999996   4  3467788888887776543456899999999999999998832


Q ss_pred             CCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      ..+..+++ ++|                      +.|.||++++..++..+  +.| ||.|++++|+|+.|...++.+|+
T Consensus        77 ~~~~~~~~~~~i----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~~~~~g~  131 (410)
T 3e2y_A           77 IYQRQIDPNEEI----------------------LVAVGAYGSLFNSIQGL--VDP-GDEVIIMVPFYDCYEPMVRMAGA  131 (410)
T ss_dssp             HHTSCCCTTTSE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHHHTTC
T ss_pred             HhCCCCCCCCCE----------------------EEeCCcHHHHHHHHHHh--cCC-CCEEEEeCCCchhhHHHHHHcCC
Confidence            21112333 445                      56999999999998755  457 89999999999999988876654


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       132 ~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~  211 (410)
T 3e2y_A          132 VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEW  211 (410)
T ss_dssp             EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             EEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhh
Confidence            0                                                                               


Q ss_pred             ---------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCC-hhh
Q psy16707        299 ---------------------------------------------------KILIRAFYSSPPIHGARIVQEILGD-PKL  326 (420)
Q Consensus       299 ---------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~d-p~L  326 (420)
                                                                         ....+....+++..++.++...|.+ ...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  291 (410)
T 3e2y_A          212 LVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKR  291 (410)
T ss_dssp             CBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred             cccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhcc
Confidence                                                               1111233445577777777665542 111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------------HHHHHHHHHhCCe
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------------ATQVEKLIKEHSV  390 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------------~~~v~~Ll~e~~V  390 (420)
                      ...|.+.++.++++++++|+.+.+.|++.|    |....++.|+|.|+.+.                .+++++|++++||
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv  367 (410)
T 3e2y_A          292 MDDPECYFNSLPKELEVKRDRMVRLLNSVG----LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKL  367 (410)
T ss_dssp             TTSTTSHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCE
Confidence            123455677788999999999999999987    67778899999985332                1677888899999


Q ss_pred             EEeCC-------------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        391 YLTKD-------------G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       391 y~~p~-------------g--Ris~agl~~~ni~~la~AI~~  417 (420)
                      ++.||             +  |||++. +.++|++..++|.+
T Consensus       368 ~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          368 TAIPVSAFCDSKSKPHFEKLVRFCFIK-KDSTLDAAEEIFRA  408 (410)
T ss_dssp             ECEEGGGGSCTTTHHHHTTEEEEECCC-CHHHHHHHHHHHHT
T ss_pred             EEeCchhhCCCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHh
Confidence            99873             1  899885 88888888888765

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.72  E-value=2.6e-17  Score=164.40  Aligned_cols=241  Identities=11%  Similarity=0.048  Sum_probs=161.8

Q ss_pred             CCChHHHHHHHH-HccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCC----CCCCCCCCCCHHHHHHHHHHH-
Q psy16707        143 KVPSSNLLTEAF-KKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL----DKEYAPIIGAPDFGKLAAQLA-  216 (420)
Q Consensus       143 ~~d~i~~l~~~~-~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~----~~~Y~p~~G~~~fr~a~~~~~-  216 (420)
                      .++++..+...+ +.+.++++|||+.|.   ++..+++.+.++++...+..++.    .+.|.+..|.++||+++++++ 
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~   89 (417)
T 3g7q_A           13 RHSGITRLMEDLNDGLRTPGAIMLGGGN---PAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLR   89 (417)
T ss_dssp             ---CHHHHHHHHHC-----CCEECSCCC---CCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHhhccCCCceEecCcC---CCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHH
Confidence            455666555444 444678999999996   65545555788888777654321    248999999999999999998 


Q ss_pred             --cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC-----EEEEc-CCCCCCc
Q psy16707        217 --YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK-----VIYVP-TPTWGNH  288 (420)
Q Consensus       217 --~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd-----~Vlvp-dP~w~ny  288 (420)
                        +|..   +++++|                      +.|.|||+|+.+++..+.  .| ||     .|+++ +|+|+.|
T Consensus        90 ~~~g~~---~~~~~i----------------------~~t~G~t~al~~~~~~l~--~~-gd~~~~~~vi~~~~p~~~~~  141 (417)
T 3g7q_A           90 ETLGWD---IEPQNI----------------------ALTNGSQSAFFYLFNLFA--GR-RADGSTKKVLFPLAPEYIGY  141 (417)
T ss_dssp             HHHCCC---CCGGGE----------------------EEESCHHHHHHHHHHHHS--BC-----CCBEEEESSCCCHHHH
T ss_pred             HHhCCC---CCcccE----------------------EEeCCcHHHHHHHHHHHc--CC-CccCCcceEEEeCCCccccc
Confidence              4433   345555                      669999999999998663  46 66     99998 9999998


Q ss_pred             HHHHhhc------C--------------c-------c-------------------------------------------
Q psy16707        289 IPICKHT------G--------------L-------E-------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~a------G--------------~-------~-------------------------------------------  298 (420)
                      ...+...      +              .       .                                           
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~  221 (417)
T 3g7q_A          142 ADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNA  221 (417)
T ss_dssp             HC-----CCEEECCCEEEEEGGGEEEEECCGGGCCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred             hhhccchhhhccccCcccccCCcccccccCHHHhccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCC
Confidence            7543110      0              0       0                                           


Q ss_pred             --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                        ....+....+++..++.++..+|.+.    
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----  297 (417)
T 3g7q_A          222 YGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRN----  297 (417)
T ss_dssp             TCTTTTCCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTT----
T ss_pred             CccccccccccccccCCCCCEEEEEechhccCCCcceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCc----
Confidence                                                              11123334456777887777777653    


Q ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-----CCCHHHHHHHHHhCCeEEeCC-------
Q psy16707        329 QWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVEKLIKEHSVYLTKD-------  395 (420)
Q Consensus       329 ~w~~el~~-m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~-------  395 (420)
                      +|.++++. ++++|+++|+.+.+.|++.-....|....++.|+|.|+     +.+.+.+...+.++||++.|+       
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~  377 (417)
T 3g7q_A          298 DLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGL  377 (417)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTB
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCC
Confidence            45555555 77899999999999988741111266677889999986     345555544447899999863       


Q ss_pred             --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                              +  |||++. +.++|++..++|.+++
T Consensus       378 ~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l  410 (417)
T 3g7q_A          378 DKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEI  410 (417)
T ss_dssp             SSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence                    1  999986 8889999999988875

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.72  E-value=1.6e-16  Score=157.84  Aligned_cols=238  Identities=16%  Similarity=0.156  Sum_probs=166.5

Q ss_pred             ccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+.++++..+.+.+++  ..+.+.|||+.|.     ..+++++.|.+|......+ ....|.+..|.++||+++++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~-----~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~   81 (391)
T 3h14_A            8 RSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQ-----PGTGAPRGAVEALAKSLET-DALGYTVALGLPALRQRIARLY   81 (391)
T ss_dssp             TTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSS-----CSSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHH
T ss_pred             HhhcCcchHHHHHHHHHHHHhcCCCeEEccCCC-----CCCCCCHHHHHHHHHHHhc-CCCCCCCCCChHHHHHHHHHHH
Confidence            677777777766655433  3456899999996     3345678888888776643 4578999999999999999998


Q ss_pred             cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      ....+..+.++.|                      +.|.|||+|+.+++..+  +.| ||+|++++|+|+.|...++..|
T Consensus        82 ~~~~g~~~~~~~v----------------------~~t~g~~~al~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~g  136 (391)
T 3h14_A           82 GEWYGVDLDPGRV----------------------VITPGSSGGFLLAFTAL--FDS-GDRVGIGAPGYPSYRQILRALG  136 (391)
T ss_dssp             HHHHCCCCCGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHHHHHTT
T ss_pred             HHHhCCCCCHHHE----------------------EEecChHHHHHHHHHHh--cCC-CCEEEEcCCCCccHHHHHHHcC
Confidence            3211111334545                      67999999999998755  457 9999999999999999988877


Q ss_pred             cc------------------------------------------------------------------------------
Q psy16707        297 LE------------------------------------------------------------------------------  298 (420)
Q Consensus       297 ~~------------------------------------------------------------------------------  298 (420)
                      ++                                                                              
T Consensus       137 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~  216 (391)
T 3h14_A          137 LVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL  216 (391)
T ss_dssp             CEEEEEECCGGGTTSCCHHHHTTSCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGG
T ss_pred             CEEEEeecCcccCCCCCHHHHHhcCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChh
Confidence            64                                                                              


Q ss_pred             ------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRII  342 (420)
Q Consensus       299 ------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~  342 (420)
                                                          ....+....+++..++.++...|.+       .+.++.++++++
T Consensus       217 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~~~~~~~~~  289 (391)
T 3h14_A          217 ELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDC-------DAELQANLDVYK  289 (391)
T ss_dssp             GTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC-------HHHHHHHHHHHH
T ss_pred             hcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC-------hHHHHHHHHHHH
Confidence                                                1112334456677777766665642       245666779999


Q ss_pred             HHHHHHHHHHHhcCCCCCCcc-cCCCCceEEec-----CCCH-HHHHHHHHhCCeEEeCC-----------CcEEEcccC
Q psy16707        343 SMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYT-----GLNA-TQVEKLIKEHSVYLTKD-----------GRISMAGVT  404 (420)
Q Consensus       343 ~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~-----~l~~-~~v~~Ll~e~~Vy~~p~-----------gRis~agl~  404 (420)
                      ++|+.+.+.|++.|    +.. ..++.|+|.|+     +.+. +.+++|++++||++.|+           -|||++. +
T Consensus       290 ~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~  364 (391)
T 3h14_A          290 ANRKLMLERLPKAG----FTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-A  364 (391)
T ss_dssp             HHHHHHHHHHHHHT----CCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-C
T ss_pred             HHHHHHHHHHHHcC----CCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-C
Confidence            99999999999987    443 46677898886     3344 45588888899999863           1999986 7


Q ss_pred             CCCHHHHHHHHHHHh
Q psy16707        405 SKNVGYLAKAIHAVT  419 (420)
Q Consensus       405 ~~ni~~la~AI~~vv  419 (420)
                      ++.++...++|.+++
T Consensus       365 ~~~i~~~l~~l~~~~  379 (391)
T 3h14_A          365 TADIEEGLDRLEAFM  379 (391)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            788888888887764

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.72  E-value=3.1e-16  Score=155.48  Aligned_cols=241  Identities=17%  Similarity=0.216  Sum_probs=178.1

Q ss_pred             cchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLA  212 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~  212 (420)
                      .++++ +..++++++..+.+.+++.  ++.|||+.|.   ++  ++.++.|.+|.....++ ....|.+..|.+++++++
T Consensus         2 ~~~~~-~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~l   72 (389)
T 1gd9_A            2 ALSDR-LELVSASEIRKLFDIAAGM--KDVISLGIGE---PD--FDTPQHIKEYAKEALDK-GLTHYGPNIGLLELREAI   72 (389)
T ss_dssp             CHHHH-HHHSCCCHHHHHHHHHHTC--SSCEECCCCS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHH
T ss_pred             chhhH-hHhCChhHHHHHHHHHhhh--cCeEecCCCC---CC--CCCCHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHH
Confidence            35555 7788899999999888765  5789999996   32  34567788777766543 346799999999999999


Q ss_pred             HHHHc---CCCCccccCCc-eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        213 AQLAY---GEDCPQLKDNL-ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       213 ~~~~~---g~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      ++++.   |.+   +++++ |                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|
T Consensus        73 a~~~~~~~g~~---~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~  124 (389)
T 1gd9_A           73 AEKLKKQNGIE---ADPKTEI----------------------MVLLGANQAFLMGLSAF--LKD-GEEVLIPTPAFVSY  124 (389)
T ss_dssp             HHHHHHHHCCC---CCTTTSE----------------------EEESSTTHHHHHHHTTT--CCT-TCEEEEEESCCTTH
T ss_pred             HHHHHHHhCCC---CCCCCeE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCchhH
Confidence            99983   532   23455 5                      56999999999988644  457 89999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++..|++                                                                      
T Consensus       125 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~  204 (389)
T 1gd9_A          125 APAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEH  204 (389)
T ss_dssp             HHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             HHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhh
Confidence            9888776653                                                                      


Q ss_pred             ------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChhhH
Q psy16707        299 ------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPKLK  327 (420)
Q Consensus       299 ------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~L~  327 (420)
                                                                      .   ........+++..++.++...|.+.   
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---  281 (389)
T 1gd9_A          205 FIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDE---  281 (389)
T ss_dssp             CBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCH---
T ss_pred             cccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---
Confidence                                                            0   1111222455667777666667642   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC------
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~------  395 (420)
                      .+| +.++.++++++++|+.+.+.|++.|    |....++.|+|.|+.+     +. +.++.|++++||++.|+      
T Consensus       282 ~~~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~  356 (389)
T 1gd9_A          282 RSW-KAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA  356 (389)
T ss_dssp             HHH-HHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG
T ss_pred             Ccc-hHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC
Confidence            222 3577778999999999999999886    6666778899988544     44 44577777999999874      


Q ss_pred             --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                        +  |||++. +.++++...++|.+++
T Consensus       357 ~~~~iRi~~~~-~~~~i~~~l~~l~~~~  383 (389)
T 1gd9_A          357 GEGYVRISYAT-AYEKLEEAMDRMERVL  383 (389)
T ss_dssp             GTTBEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence              2  999985 7788888888887764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.70  E-value=3.5e-16  Score=155.14  Aligned_cols=237  Identities=14%  Similarity=0.094  Sum_probs=172.8

Q ss_pred             ccccCCChHHHHHHHHHc---cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKK---DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL  215 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~---d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~  215 (420)
                      ++.+.+.++..+.+....   +.+.+.|||+.|.   +  ..++++.|++|......  ....|.+..|.++||++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~   78 (396)
T 3jtx_A            6 LKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGE---P--KHPTPKVITDALTASLH--ELEKYPLTAGLPELRQACANW   78 (396)
T ss_dssp             HHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCS---C--CSCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHHH
T ss_pred             hccCCCChHHHHHHHHHhhhhccCCCeEEeCCcC---C--CCCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHHH
Confidence            556667777666655443   4578899999997   3  34567888888777653  467899999999999999999


Q ss_pred             HcCCCCcc-ccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC-----CEEEEcCCCCCCc
Q psy16707        216 AYGEDCPQ-LKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-----KVIYVPTPTWGNH  288 (420)
Q Consensus       216 ~~g~~~~~-~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-----d~VlvpdP~w~ny  288 (420)
                      +....+.. ++++ .|                      +.|.||++++.+++..+  +.| |     |+|++++|+|+.|
T Consensus        79 l~~~~g~~~~~~~~~i----------------------~~t~g~~~al~~~~~~~--~~~-g~~~~~d~vl~~~p~~~~~  133 (396)
T 3jtx_A           79 LKRRYDGLTVDADNEI----------------------LPVLGSREALFSFVQTV--LNP-VSDGIKPAIVSPNPFYQIY  133 (396)
T ss_dssp             HHHHTTTCCCCTTTSE----------------------EEESSHHHHHHHHHHHH--CCC----CCCCEEEEEESCCHHH
T ss_pred             HHHhcCCCCCCCCCeE----------------------EEcCCcHHHHHHHHHHH--hCC-CCccCCCEEEEcCCCcHhH
Confidence            84222211 2344 55                      56999999999998765  446 5     7999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++.+|++                                                                      
T Consensus       134 ~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  213 (396)
T 3jtx_A          134 EGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEI  213 (396)
T ss_dssp             HHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTC
T ss_pred             HHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence            9999888764                                                                      


Q ss_pred             ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                            .........+++..++.++...|.+ 
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-  292 (396)
T 3jtx_A          214 YFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDD-  292 (396)
T ss_dssp             CSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC-
T ss_pred             ccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC-
Confidence                                                                  0001122234566666666655543 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC-----
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD-----  395 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~-----  395 (420)
                            .+.++.++++++++|+.+.+.|++.     +....++.|+|.|+.++    .+++++|++++||++.|+     
T Consensus       293 ------~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~  361 (396)
T 3jtx_A          293 ------EQHVIDNRRLYQEKFERVIPILQQV-----FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLAR  361 (396)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHTTT-----SCCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCC
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHhc-----CCccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCC
Confidence                  2456677799999999999999865     23456788999997654    466788888999999763     


Q ss_pred             ---------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        396 ---------G--RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 ---------g--Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                               +  |||++. +.+++++..++|.++++
T Consensus       362 ~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~  396 (396)
T 3jtx_A          362 DTEQGNPGEGYVRIALVA-DVATCVKAAEDIVSLYR  396 (396)
T ss_dssp             CCTTCCTTTTEEEEECCS-CHHHHHHHHHHHHHHCC
T ss_pred             cccccCCCCCeEEEEEcC-CHHHHHHHHHHHHHHhC
Confidence                     2  999986 88899999999988764

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.69  E-value=8.1e-16  Score=157.00  Aligned_cols=237  Identities=15%  Similarity=0.093  Sum_probs=164.6

Q ss_pred             cCCChHHHHHHHHHc------cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707        142 VKVPSSNLLTEAFKK------DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL  215 (420)
Q Consensus       142 ~~~d~i~~l~~~~~~------d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~  215 (420)
                      +.++++..+.+.+.+      ..+.+.|||+.|.   ++  +.+++.|.+|......+...+.|.+..|.++|+++++++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~  107 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGF---FS--YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKL  107 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCS---CS--SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCC---CC--CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHH
Confidence            666777777766632      2456899999996   33  346678888877766432357899999999999999999


Q ss_pred             HcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        216 AYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       216 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                      +....+..++++.|                      +.|.||++|+.+++..+  +.| ||+|++++|+|+.|...++.+
T Consensus       108 l~~~~g~~~~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vlv~~p~y~~~~~~~~~~  162 (447)
T 3b46_A          108 YSPIYNTELKAENV----------------------TVTTGANEGILSCLMGL--LNA-GDEVIVFEPFFDQYIPNIELC  162 (447)
T ss_dssp             HTTTTTSCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHHHT
T ss_pred             HHHhcCCCCChhhE----------------------EEeCCHHHHHHHHHHHH--cCC-CCEEEEeCCCchhHHHHHHHc
Confidence            84322222334444                      67999999999998755  457 999999999999999888765


Q ss_pred             Cc-----------------------c------------------------------------------------------
Q psy16707        296 GL-----------------------E------------------------------------------------------  298 (420)
Q Consensus       296 G~-----------------------~------------------------------------------------------  298 (420)
                      |+                       .                                                      
T Consensus       163 g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~  242 (447)
T 3b46_A          163 GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEV  242 (447)
T ss_dssp             TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEecc
Confidence            42                       1                                                      


Q ss_pred             ----------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCC
Q psy16707        299 ----------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGD  323 (420)
Q Consensus       299 ----------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~d  323 (420)
                                                                          .   ........+++...+.++...|.+
T Consensus       243 ~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~  322 (447)
T 3b46_A          243 YEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSIND  322 (447)
T ss_dssp             TTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred             chhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC
Confidence                                                                0   000111223344455444444432


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-------------------H-HHHHH
Q psy16707        324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------------------A-TQVEK  383 (420)
Q Consensus       324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-------------------~-~~v~~  383 (420)
                          ..+.+.++.++++++++|+.+.+.|+++|    |..+.++.|+|.|+.++                   . +++++
T Consensus       323 ----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  394 (447)
T 3b46_A          323 ----ALKIGYFEKMRQEYINKFKIFTSIFDELG----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHW  394 (447)
T ss_dssp             ----HHHHTHHHHHHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHH
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHH
Confidence                11234567788999999999999999987    66677888999985432                   2 56678


Q ss_pred             HHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHH
Q psy16707        384 LIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       384 Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~  417 (420)
                      |++++||++.|+             +  |||++. ++++|+...+.|.+
T Consensus       395 l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l~~~~~~l~~  442 (447)
T 3b46_A          395 LINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-DDAYLENAVERLKL  442 (447)
T ss_dssp             HHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-CHHHHHHHHHHGGG
T ss_pred             HHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-CHHHHHHHHHHHHH
Confidence            888999999874             2  999984 66666666666654

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.69  E-value=1.5e-16  Score=162.75  Aligned_cols=124  Identities=41%  Similarity=0.655  Sum_probs=118.3

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCcccccccc
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK-----PWNHITDQIG   78 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~-----~w~~i~~Q~G   78 (420)
                      ..+++.+.|..+++||.+++.++..+|.+++|+++|.++++.|++|++.+|+.|++.|++.+.++     +|+++..|.|
T Consensus       311 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g  390 (448)
T 3meb_A          311 VSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIG  390 (448)
T ss_dssp             HHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCS
T ss_pred             HHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCce
Confidence            45667788999999999999999999999999999999999999999999999999999998887     8999999999


Q ss_pred             ceeecCCCHHHHHHHHHhcceEEcC-CCceecccCCcCCHHHHHHHHHhh
Q psy16707         79 MFCYTGLNATQVEKLIKEHSVYLTK-DGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        79 mFs~~gL~~~qv~~L~~~~~IY~~~-~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ||++++++.++++.|.++++||+.+ +||||++++++.+|++++++|.++
T Consensus       391 ~~~~~~~~~~~~~~ll~~~gV~v~~G~gRis~a~~~~~~i~~~~~~l~~~  440 (448)
T 3meb_A          391 MFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDA  440 (448)
T ss_dssp             SEEECCCCHHHHHHHHHHHCEEECSGGGEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             EEEecCCCHHHHHHHHHhCCEEEeCCCcEEEEecCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999998 999999999999999999999987

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.69  E-value=3.9e-16  Score=160.13  Aligned_cols=247  Identities=13%  Similarity=0.135  Sum_probs=177.8

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a  211 (420)
                      +|++ ...+..+++..+.+.+.   +++.|||+.|.   ++....+++.|.+|.....++.  ....|.+..|.++||++
T Consensus        54 ~s~~-~~~~~~s~~~~~~~~~~---~~~~i~l~~g~---p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~  126 (448)
T 3aow_A           54 FSKK-ALEMRASEVRELLKLVE---TSDIISLAGGL---PNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRET  126 (448)
T ss_dssp             CCHH-HHHCCCCHHHHHHHHHH---TSSSEECCCCC---CCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHH
T ss_pred             hhHH-HhcCCCcHHHHHHHhcc---CCCcEeCCCCC---CCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHH
Confidence            5655 66778888887776654   45789999997   4444457788888777665431  13589999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+.. +++.|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...
T Consensus       127 ia~~~~~~~g~~-~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-Gd~Vlv~~p~y~~~~~~  180 (448)
T 3aow_A          127 LMKWLGKRYGIS-QDNDI----------------------MITSGSQQALDLIGRVF--LNP-GDIVVVEAPTYLAALQA  180 (448)
T ss_dssp             HHHHHHHHHCCC-TTSEE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred             HHHHHHHhcCcC-ChhhE----------------------EEeCcHHHHHHHHHHHH--cCC-CCEEEEeCCChHHHHHH
Confidence            999882211111 24444                      67999999999998766  457 99999999999999876


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       181 ~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~  260 (448)
T 3aow_A          181 FNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYG  260 (448)
T ss_dssp             HHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCT
T ss_pred             HHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            6554431                                                                         


Q ss_pred             -----------------------------------------------hh---hhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 -----------------------------------------------KI---LIRAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 -----------------------------------------------~~---~~r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                     ..   .......+++..++.++...|.+.    
T Consensus       261 ~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~----  336 (448)
T 3aow_A          261 ELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGG----  336 (448)
T ss_dssp             TCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTT----
T ss_pred             cccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhC----
Confidence                                                           11   112222345777887777767542    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--------
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--------  395 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--------  395 (420)
                      .|.+.++.++++++++|+.+.+.|++.- |+.+....++.|||.|+.+    +. +.+++|+++ ||++.|+        
T Consensus       337 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~-gV~v~pg~~f~~~~~  414 (448)
T 3aow_A          337 YLEKHIPEIRKFYKPRRDAMLEALEEFM-PEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKK-GVAYVPGEAFYAHRD  414 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CTTCEECCCSBSSEEEEECSTTCCHHHHHHHHHHT-TEECEEGGGGSTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHHC-CcEEEcchhhcCCCC
Confidence            4667788888999999999999998751 1115656778899999754    34 455777655 9999873        


Q ss_pred             --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                        +  |||++..+.++|+...++|.+++
T Consensus       415 ~~~~iRls~~~~~~e~i~~~~~~L~~~l  442 (448)
T 3aow_A          415 VKNTMRLNFTYVDEDKIMEGIKRLAETI  442 (448)
T ss_dssp             CCSEEEEECSSSCTHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence              1  99999778899999998888765

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.68  E-value=5e-17  Score=161.60  Aligned_cols=237  Identities=13%  Similarity=0.104  Sum_probs=161.2

Q ss_pred             cccCCChHHHHHHHHHccCCCCc-----eeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHH
Q psy16707        140 SSVKVPSSNLLTEAFKKDTNVNK-----INLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQ  214 (420)
Q Consensus       140 ~~~~~d~i~~l~~~~~~d~~~~k-----InL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~  214 (420)
                      ...+.|+++...+.++.+....+     |||+.|.|   ++ .++++.|++|......+...+.|.+..|.+++++++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~g~~---~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~   89 (407)
T 3nra_A           14 DNAPGQEVRQSAAGLEALIRGAPIEGRPVDFSHGDV---DA-HEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAP   89 (407)
T ss_dssp             -------------CCTTTCCSCCCCSCCEETTSCCT---TT-SCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHH
T ss_pred             CCCccHHHHHHhhhhHHHhhcCCCCCceeeecCcCC---CC-CCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHH
Confidence            34456667766665555655555     99999974   33 45667777777766543334579999999999999999


Q ss_pred             HH---cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        215 LA---YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       215 ~~---~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      ++   +|.+   +++ +.|                      +.|.|||+|+.+++..+  +.| ||+|++++|+|++|..
T Consensus        90 ~l~~~~g~~---~~~~~~i----------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~  141 (407)
T 3nra_A           90 RLAAFTGAP---VDARDGL----------------------IITPGTQGALFLAVAAT--VAR-GDKVAIVQPDYFANRK  141 (407)
T ss_dssp             HHHHHHTSC---CCTTTSE----------------------EEESHHHHHHHHHHHTT--CCT-TCEEEEEESCCTHHHH
T ss_pred             HHHHHhCCC---CCCCCcE----------------------EEeCCcHHHHHHHHHHh--CCC-CCEEEEcCCcccchHH
Confidence            88   5543   222 344                      66999999999988644  457 9999999999999998


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      .++.+|++                                                                        
T Consensus       142 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~  221 (407)
T 3nra_A          142 LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLY  221 (407)
T ss_dssp             HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred             HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccc
Confidence            88877642                                                                        


Q ss_pred             ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                            ....+....++|..++.++..+|.+.
T Consensus       222 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~  301 (407)
T 3nra_A          222 SRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA  301 (407)
T ss_dssp             TTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC
T ss_pred             cccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhcc
Confidence                                                                  11112233344555555554445431


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC-----H-HHHHHHHHhCCeEEeCCC-
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN-----A-TQVEKLIKEHSVYLTKDG-  396 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~-----~-~~v~~Ll~e~~Vy~~p~g-  396 (420)
                         .+|   ++.++++++++|+.+.+.|+++ |    |..+.++.|+|.|+.++     . ++++.|++++||++.|+. 
T Consensus       302 ---~~~---~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~  371 (407)
T 3nra_A          302 ---PGW---MEDRIARHQAIRDELLHVLRGCEG----VFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTE  371 (407)
T ss_dssp             ---TTH---HHHHHHHHHHHHHHHHHHHHTSTT----CBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGG
T ss_pred             ---chH---HHHHHHHHHHHHHHHHHHHhcCCC----ceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence               133   4556688999999999999987 4    67777888899987543     3 556788888999998742 


Q ss_pred             ---------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        397 ---------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 ---------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                               |||++. +.++|+++.++|.+++
T Consensus       372 ~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~  402 (407)
T 3nra_A          372 FSPHTADSVRLNFSQ-DHEAAVAAARRIVTLV  402 (407)
T ss_dssp             TCTTCTTBEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence                     999995 8888999999988875

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.68  E-value=2.6e-16  Score=158.93  Aligned_cols=244  Identities=15%  Similarity=0.117  Sum_probs=167.0

Q ss_pred             cCCChHHHHHHHHHcc-----CCCCceeecccccccCCCCCCc-hHHHHHHH--HHHHcc--CCCCCCCCCCCCHHHHHH
Q psy16707        142 VKVPSSNLLTEAFKKD-----TNVNKINLGVGAYRDDQGKPYV-LPSVKQAD--EIVLNK--NLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       142 ~~~d~i~~l~~~~~~d-----~~~~kInL~iG~y~d~dg~~~~-~~~V~~a~--~~~~~~--~~~~~Y~p~~G~~~fr~a  211 (420)
                      +..|++..+...+.++     ..+++|||+.|.   ++....+ .+.+.++.  ..+..+  ...+.|.+..|.++||++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~---p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~   86 (427)
T 3ppl_A           10 FDAERIGLFHEDIKRKFDELKSKNLKLDLTRGK---PSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQI   86 (427)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCCEECCCCS---CCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHH
T ss_pred             HhHHHHHHhHHHHHHHHHHhhcCCceEecCCCC---CChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHH
Confidence            3444444444443333     456889999997   4432221 12466554  333222  235799999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHH--HHHHHHHhcCC---------CCCEEEE
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLR--VGAAFLKNFFP---------GEKVIYV  280 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~--~~~~~l~~~~p---------~gd~Vlv  280 (420)
                      +++++ +     +++++|                      +.|.|+++++.  +++..+....|         .||+|++
T Consensus        87 ia~~~-~-----~~~~~i----------------------~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v  138 (427)
T 3ppl_A           87 WADLL-G-----VPVEQV----------------------LAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWIC  138 (427)
T ss_dssp             HHHHH-T-----SCGGGE----------------------EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEE
T ss_pred             HHHHh-C-----CCcceE----------------------EEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEE
Confidence            99988 3     234455                      66999999994  66654433213         1799999


Q ss_pred             cCCCCCCcHHHHhhcCcc--------------------------------------------------------------
Q psy16707        281 PTPTWGNHIPICKHTGLE--------------------------------------------------------------  298 (420)
Q Consensus       281 pdP~w~ny~~i~~~aG~~--------------------------------------------------------------  298 (420)
                      ++|+|+.|...++.+|++                                                              
T Consensus       139 ~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~i  218 (427)
T 3ppl_A          139 PVPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRV  218 (427)
T ss_dssp             EESCCHHHHHHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEE
T ss_pred             cCCCcHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEE
Confidence            999999999999988875                                                              


Q ss_pred             ---------------------------------------------------------------hhhhhhccCCCchHHHH
Q psy16707        299 ---------------------------------------------------------------KILIRAFYSSPPIHGAR  315 (420)
Q Consensus       299 ---------------------------------------------------------------~~~~r~~~s~pp~~ga~  315 (420)
                                                                                     ....+....+++...+.
T Consensus       219 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~  298 (427)
T 3ppl_A          219 VWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQL  298 (427)
T ss_dssp             EEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHH
T ss_pred             EEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHH
Confidence                                                                           11112233456777787


Q ss_pred             HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeE
Q psy16707        316 IVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVY  391 (420)
Q Consensus       316 iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy  391 (420)
                      ++...|.+.   +.|.++++.+++.++++|+.+.+.|++. +.-+.+....++.|+|.|+.++   .+++..+++++||+
T Consensus       299 ~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~  375 (427)
T 3ppl_A          299 AHARYFGDA---EGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIA  375 (427)
T ss_dssp             HHHHHHCSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHHHHTTEE
T ss_pred             HHHHHHhCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHHHHCCCE
Confidence            777778762   3456777888889999998888888652 1001255567789999997654   55665566899999


Q ss_pred             EeCCC--------------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        392 LTKDG--------------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       392 ~~p~g--------------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +.|+|              |||++..+.++|++..++|.+++
T Consensus       376 v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l  417 (427)
T 3ppl_A          376 LTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCV  417 (427)
T ss_dssp             CCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred             EecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHH
Confidence            99831              99998778889999988888765

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.67  E-value=1e-16  Score=161.33  Aligned_cols=224  Identities=13%  Similarity=0.105  Sum_probs=163.6

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHH--cc-CCCCCCCCCCCC-----HHHHHHHHHHHcCCCCccccC-Cc
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL--NK-NLDKEYAPIIGA-----PDFGKLAAQLAYGEDCPQLKD-NL  228 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~--~~-~~~~~Y~p~~G~-----~~fr~a~~~~~~g~~~~~~~~-~~  228 (420)
                      ..+++|||++|.   ++  +++++.++++.....  .. .....|.+..|.     ++||+++++++- ..+..+.+ ++
T Consensus        20 ~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~   93 (391)
T 3bwn_A           20 MSDFVVNLDHGD---PT--AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRY   93 (391)
T ss_dssp             TTTSCEECSSCC---CG--GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSE
T ss_pred             CCCCeeEcCCCC---CC--CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCe
Confidence            456789999996   44  355677777652221  11 145689999999     999999999873 22222223 34


Q ss_pred             eeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC----EEEEcCCCCCCcHHHHhhcCcc------
Q psy16707        229 ISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK----VIYVPTPTWGNHIPICKHTGLE------  298 (420)
Q Consensus       229 i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd----~VlvpdP~w~ny~~i~~~aG~~------  298 (420)
                      |                      +.|.|+++++.+++..+..  | ||    +|++++|+|++|..+++.+|++      
T Consensus        94 i----------------------~~t~G~~~al~~~~~~l~~--~-Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~  148 (391)
T 3bwn_A           94 I----------------------VVGTGSTQLCQAAVHALSS--L-ARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEG  148 (391)
T ss_dssp             E----------------------EEEEHHHHHHHHHHHHHHH--T-SSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEE
T ss_pred             E----------------------EEeCChHHHHHHHHHHhcC--C-CCCCcceEEEcCCCchhHHHHHHHcCCeEEEecC
Confidence            4                      6799999999999876643  7 89    9999999999999999988764      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       149 d~~~l~~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~  228 (391)
T 3bwn_A          149 DAWGFDKKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKITGHAGSRIGW  228 (391)
T ss_dssp             ESTTCCCCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEE
T ss_pred             CHHHcCCCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhcCCCccceEE
Confidence                                                                                            


Q ss_pred             ------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 ------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQW-------LTEVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 ------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w-------~~el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                  ........+++|..+|.++...|++.   .+|       .+.++.++++++++|+.+.+.|++.+  +
T Consensus       229 ~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~  303 (391)
T 3bwn_A          229 ALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVL---KETCKSESESENFFKYGREMMKNRWEKLREVVKESD--A  303 (391)
T ss_dssp             EEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHH---HHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCS--S
T ss_pred             EEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCc---chhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCC--C
Confidence                        11112224667888888877777543   123       45678888999999999999999862  1


Q ss_pred             CCccc-------------CCCCceEEecCCC-HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHH
Q psy16707        360 PWNHI-------------TDQIGMFCYTGLN-ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIH  416 (420)
Q Consensus       360 ~w~~i-------------~~q~GmF~~~~l~-~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~  416 (420)
                       |...             .++.|+|.|+.++ .+++..+++++||++.|+       +  |||++. +.++++++.++|.
T Consensus       304 -~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~  381 (391)
T 3bwn_A          304 -FTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLA  381 (391)
T ss_dssp             -EECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHH
T ss_pred             -cccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHH
Confidence             2221             2467889998775 456777789999999984       3  999996 7778999999988


Q ss_pred             HHh
Q psy16707        417 AVT  419 (420)
Q Consensus       417 ~vv  419 (420)
                      +++
T Consensus       382 ~~~  384 (391)
T 3bwn_A          382 NMK  384 (391)
T ss_dssp             SCC
T ss_pred             HHH
Confidence            764

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.67  E-value=9.9e-16  Score=153.95  Aligned_cols=237  Identities=12%  Similarity=0.093  Sum_probs=167.2

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH--
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA--  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~--  216 (420)
                      +..+.+.++..+.+..++.++.+.|||+.|.+   +  +..++.|++|......+...+.|.+..|.++|++++++++  
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~---~--~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~  100 (404)
T 2o1b_A           26 LANIPDSYFGKTMGRKIEHGPLPLINMAVGIP---D--GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQR  100 (404)
T ss_dssp             HHTSCCCTTC-------CCCSSCCEECCCCSC---S--SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhhCCchHHHHHHHHHHhcCCCCEEecCCcCC---C--CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            55666666666655554444566899999973   2  3356788888777653322457998899999999999998  


Q ss_pred             -cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhh
Q psy16707        217 -YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKH  294 (420)
Q Consensus       217 -~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~  294 (420)
                       +|.+   +++ +.|                      +.|.|||+++.+++..+  +.| ||.|++++|+|+.|...++.
T Consensus       101 ~~g~~---~~~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~~  152 (404)
T 2o1b_A          101 QYNVT---LDKEDEV----------------------CILYGTKNGLVAVPTCV--INP-GDYVLLPDPGYTDYLAGVLL  152 (404)
T ss_dssp             HHCCC---CCTTTSE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCSSHHHHHHH
T ss_pred             HhCCC---CCCcccE----------------------EEcCCcHHHHHHHHHHh--cCC-CCEEEEcCCCchhHHHHHHH
Confidence             4543   222 344                      56999999999998765  457 89999999999999998887


Q ss_pred             cCcc----------------------------------------------------------------------------
Q psy16707        295 TGLE----------------------------------------------------------------------------  298 (420)
Q Consensus       295 aG~~----------------------------------------------------------------------------  298 (420)
                      .|++                                                                            
T Consensus       153 ~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~  232 (404)
T 2o1b_A          153 ADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKN  232 (404)
T ss_dssp             TTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCC
T ss_pred             CCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC
Confidence            7653                                                                            


Q ss_pred             -------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q psy16707        299 -------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVK  335 (420)
Q Consensus       299 -------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~  335 (420)
                                                                 .........+++..++.++...|.+.      .+.++
T Consensus       233 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~  306 (404)
T 2o1b_A          233 PSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY------DDFLE  306 (404)
T ss_dssp             CCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC------HHHHH
T ss_pred             CChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC------HHHHH
Confidence                                                       01112222355666666665555321      23466


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC--------C--cEEE
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD--------G--RISM  400 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~--------g--Ris~  400 (420)
                      .++++++++|+.+.+.|++.|    |....++.|+|.|+.++    . +.+++|++++||++.|+        +  |||+
T Consensus       307 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~  382 (404)
T 2o1b_A          307 EQSNVFKTRRDRFEAMLAKAD----LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISL  382 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT----CCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhcC----CeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEE
Confidence            677899999999999999886    66667788999986443    3 45678888899999874        2  9999


Q ss_pred             cccCCCCHHHHHHHHHHHh
Q psy16707        401 AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       401 agl~~~ni~~la~AI~~vv  419 (420)
                      +. ++++++...++|.+++
T Consensus       383 ~~-~~e~l~~~l~~l~~~l  400 (404)
T 2o1b_A          383 AL-DDQKLDEAAIRLTELA  400 (404)
T ss_dssp             CS-CTTHHHHHHHHHHGGG
T ss_pred             cC-CHHHHHHHHHHHHHHH
Confidence            96 8889999999988775

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.67  E-value=7.8e-16  Score=154.42  Aligned_cols=244  Identities=16%  Similarity=0.184  Sum_probs=157.3

Q ss_pred             cccchhhhccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707        131 PIRFQDARTSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF  208 (420)
Q Consensus       131 p~~~~~~~~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f  208 (420)
                      ||.++++ +..+.+.++..+...++  ...+.+.|||+.|.   ++  +..++.|.+|......+...+.|.+..|.++|
T Consensus         7 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l   80 (412)
T 2x5d_A            7 PARRFAR-IDRLPPYVFNITAELKMAARRRGEDIIDLSMGN---PD--GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRL   80 (412)
T ss_dssp             ---------------CHHHHHHHHHHHHHTTCCCEECSSCC---CC--SCCCHHHHHHHHHTC---------CTTCCHHH
T ss_pred             ccchhHH-HhhcCchHHHHHHHHHHHHhhcCCCEEecCCCC---CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHH
Confidence            4556666 66777666666554443  12356789999997   32  34677888887765543235689999999999


Q ss_pred             HHHHHHHH---cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCC
Q psy16707        209 GKLAAQLA---YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPT  284 (420)
Q Consensus       209 r~a~~~~~---~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~  284 (420)
                      ++++++++   +|..   +++ +.|                      +.|.|||+|+.+++..+  +.| ||.|++++|+
T Consensus        81 ~~~ia~~~~~~~g~~---~~~~~~v----------------------~~t~g~~~a~~~~~~~~--~~~-gd~Vl~~~p~  132 (412)
T 2x5d_A           81 RRAISHWYRDRYDVQ---IDPESEA----------------------IVTIGSKEGLAHLMLAT--LDH-GDTILVPNPS  132 (412)
T ss_dssp             HHHHHHHHHHHHCCC---CCTTTSE----------------------EEESCHHHHHHHHHHHH--CCT-TCEEEEEESC
T ss_pred             HHHHHHHHHHHhCCC---CCCCcCE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCC
Confidence            99999998   3532   233 345                      66999999999998765  457 8999999999


Q ss_pred             CCCcHHHHhhcCcc------------------------------------------------------------------
Q psy16707        285 WGNHIPICKHTGLE------------------------------------------------------------------  298 (420)
Q Consensus       285 w~ny~~i~~~aG~~------------------------------------------------------------------  298 (420)
                      |+.|...++..|++                                                                  
T Consensus       133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De  212 (412)
T 2x5d_A          133 YPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDL  212 (412)
T ss_dssp             CHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             chhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEec
Confidence            99999888776653                                                                  


Q ss_pred             ----------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCC
Q psy16707        299 ----------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGD  323 (420)
Q Consensus       299 ----------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~d  323 (420)
                                                                          .   ........+++..++.++...|.+
T Consensus       213 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~  292 (412)
T 2x5d_A          213 AYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG  292 (412)
T ss_dssp             TTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred             cccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence                                                                0   000111234455566655555543


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CH-HHHHHHHHhCCeEEeCC
Q psy16707        324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA-TQVEKLIKEHSVYLTKD  395 (420)
Q Consensus       324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~-~~v~~Ll~e~~Vy~~p~  395 (420)
                      .   .+   .++.++++++++|+.+.+.|++.|    |..+.++.|+|.|+.+       +. ++++.|++++||++.|+
T Consensus       293 ~---~~---~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g  362 (412)
T 2x5d_A          293 D---QQ---CVRDIARQYQQRRDVLVKGLREAG----WMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPG  362 (412)
T ss_dssp             C---SH---HHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEG
T ss_pred             C---HH---HHHHHHHHHHHHHHHHHHHHHHCC----CEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCc
Confidence            1   13   356667899999999999999886    6666777899998644       33 45678878899999874


Q ss_pred             --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                              +  |||++. +.+.++...++|.+++
T Consensus       363 ~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l  395 (412)
T 2x5d_A          363 IGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMF  395 (412)
T ss_dssp             GGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred             hhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence                    2  999986 7777887777777654

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.67  E-value=1.7e-15  Score=151.13  Aligned_cols=233  Identities=17%  Similarity=0.151  Sum_probs=170.8

Q ss_pred             ccccCCChHHHHHHHHHccC--CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKDT--NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~--~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+.++++..+...+++..  +.+.|||+.|.   ++  ++.++.|.+|......+ ....|.+..|.++|++++++++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~la~~~   91 (389)
T 1o4s_A           18 ISEIPISKTMELDAKAKALIKKGEDVINLTAGE---PD--FPTPEPVVEEAVRFLQK-GEVKYTDPRGIYELREGIAKRI   91 (389)
T ss_dssp             HHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHTT-CCCCCCCTTCCHHHHHHHHHHH
T ss_pred             HhhcCccHHHHHHHHHHHHHhcCCCEEEccCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHH
Confidence            66777888888877776543  56789999997   22  34567888887776643 3468998899999999999998


Q ss_pred             c---CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707        217 Y---GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK  293 (420)
Q Consensus       217 ~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~  293 (420)
                      .   |..   ++++.|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...++
T Consensus        92 ~~~~g~~---~~~~~v----------------------~~~~g~t~al~~~~~~l--~~~-gd~Vl~~~~~~~~~~~~~~  143 (389)
T 1o4s_A           92 GERYKKD---ISPDQV----------------------VVTNGAKQALFNAFMAL--LDP-GDEVIVFSPVWVSYIPQII  143 (389)
T ss_dssp             HHHHTCC---CCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHH
T ss_pred             HHHhCCC---CCHHHE----------------------EEecCHHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHHHH
Confidence            3   532   234444                      56999999999998765  457 8999999999999999888


Q ss_pred             hcCcc---------------------------------------------------------------------------
Q psy16707        294 HTGLE---------------------------------------------------------------------------  298 (420)
Q Consensus       294 ~aG~~---------------------------------------------------------------------------  298 (420)
                      ..|++                                                                           
T Consensus       144 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g  223 (389)
T 1o4s_A          144 LAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD  223 (389)
T ss_dssp             HTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS
T ss_pred             HcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence            77663                                                                           


Q ss_pred             ---------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707        299 ---------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTE  333 (420)
Q Consensus       299 ---------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e  333 (420)
                                                                   .........++|..++.++...|.+.         
T Consensus       224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---------  294 (389)
T 1o4s_A          224 EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD---------  294 (389)
T ss_dssp             CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---------
T ss_pred             CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc---------
Confidence                                                         01111222344555665555555431         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC--CH-HHHHHHHHhCCeEEeCC------C--cEEEcc
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NA-TQVEKLIKEHSVYLTKD------G--RISMAG  402 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p~------g--Ris~ag  402 (420)
                      ++.++++++++|+.+.+.|++.|    |..+.++.|+|.|+.+  +. +.+++|++++||++.|+      +  |||++.
T Consensus       295 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~  370 (389)
T 1o4s_A          295 NSYMVQTFKERKNFVVERLKKMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT  370 (389)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC----CeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC
Confidence            45667889999999999999886    5666677899988655  44 45577877999999875      2  999984


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                       ++++++...++|.+++
T Consensus       371 -~~~~l~~~l~~l~~~l  386 (389)
T 1o4s_A          371 -SIERLTEALDRIEDFL  386 (389)
T ss_dssp             -CHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHH
Confidence             7788888888888765

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.67  E-value=4.7e-15  Score=146.17  Aligned_cols=241  Identities=14%  Similarity=0.114  Sum_probs=172.3

Q ss_pred             ccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+..++++.+...+++.  .+.+.|||+.|..   +  +..++.|.+|......+ ....|.+..|.+++++++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~---~--~~~~~~v~~a~~~~~~~-~~~~y~~~~~~~~l~~~la~~~   79 (370)
T 2z61_A            6 LLNFESFEVMDILALAQKLESEGKKVIHLEIGEP---D--FNTPKPIVDEGIKSLKE-GKTHYTDSRGILELREKISELY   79 (370)
T ss_dssp             HHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSC---S--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHH
T ss_pred             hhhccccHHHHHHHHHHHHHhcCCCEEEccCCCC---C--CCCCHHHHHHHHHHHHc-CccCCCCCCCCHHHHHHHHHHH
Confidence            5667778888877666543  3567899999972   2  33467777777666543 4578999999999999999998


Q ss_pred             cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      -...+...+++.|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...++..|
T Consensus        80 ~~~~g~~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~~~~~g  134 (370)
T 2z61_A           80 KDKYKADIIPDNI----------------------IITGGSSLGLFFALSSI--IDD-GDEVLIQNPCYPCYKNFIRFLG  134 (370)
T ss_dssp             HHHSSCCCCGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSCCTHHHHHHHHTT
T ss_pred             HHHhCCCCChhhE----------------------EECCChHHHHHHHHHHh--cCC-CCEEEEeCCCchhHHHHHHHcC
Confidence            3211112334545                      67999999999998765  457 8999999999999998888877


Q ss_pred             cc------------------------------------------------------------------------------
Q psy16707        297 LE------------------------------------------------------------------------------  298 (420)
Q Consensus       297 ~~------------------------------------------------------------------------------  298 (420)
                      ++                                                                              
T Consensus       135 ~~~~~v~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  214 (370)
T 2z61_A          135 AKPVFCDFTVESLEEALSDKTKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKT  214 (370)
T ss_dssp             CEEEEECSSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSE
T ss_pred             CEEEEeCCCHHHHHHhcccCceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcE
Confidence            53                                                                              


Q ss_pred             ------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL  348 (420)
Q Consensus       299 ------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l  348 (420)
                                                    .........+++..++.++...|.+.    . .+.++.++++++++|+.+
T Consensus       215 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~-~~~~~~~~~~~~~~~~~l  289 (370)
T 2z61_A          215 ILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKE----T-EREINSMIKEFDRRRRLV  289 (370)
T ss_dssp             EEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHH----H-HHHHHHHHHHHHHHHHHH
T ss_pred             EEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhcc----C-HHHHHHHHHHHHHHHHHH
Confidence                                          00011122244555555444434310    1 345667779999999999


Q ss_pred             HHHHHhcCCCCCCcccCCCCceEEecCCC--H-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHH
Q psy16707        349 KDNLQKEGSNKPWNHITDQIGMFCYTGLN--A-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       349 ~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI  415 (420)
                      .+.|++.|    |....++.|+|.|+.++  . +.+++|++++||++.|+        +  ||+++ .++++++...++|
T Consensus       290 ~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l  364 (370)
T 2z61_A          290 LKYVKDFG----WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERI  364 (370)
T ss_dssp             HHHHHHTT----CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHH
T ss_pred             HHHHHHcC----CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHH
Confidence            99999886    66667788999987663  4 45577877899999874        2  99999 7888899999998


Q ss_pred             HHHhC
Q psy16707        416 HAVTK  420 (420)
Q Consensus       416 ~~vv~  420 (420)
                      .++++
T Consensus       365 ~~~l~  369 (370)
T 2z61_A          365 KEFLN  369 (370)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            88763

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.67  E-value=1.6e-15  Score=150.29  Aligned_cols=240  Identities=14%  Similarity=0.141  Sum_probs=169.6

Q ss_pred             chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      ++++ +..+..+++..+...+++.  .+.+.|||+.|.   ++  +..++.|.+|.....++ ....|.+..|.++++++
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~   75 (388)
T 1j32_A            3 LAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGE---PD--FNTPKHIVEAAKAALEQ-GKTRYGPAAGEPRLREA   75 (388)
T ss_dssp             CCHH-HHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHH
T ss_pred             hhhH-hHhCCccHHHHHHHHHHHHHhcCCCEEECCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHH
Confidence            3444 5666777776666555432  346789999997   32  34567788777766543 35679999999999999


Q ss_pred             HHHHHc---CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        212 AAQLAY---GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       212 ~~~~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      +++++.   |.+   ++++.|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|
T Consensus        76 la~~~~~~~g~~---~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~  127 (388)
T 1j32_A           76 IAQKLQRDNGLC---YGADNI----------------------LVTNGGKQSIFNLMLAM--IEP-GDEVIIPAPFWVSY  127 (388)
T ss_dssp             HHHHHHHHHCCC---CCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEESSCCTHH
T ss_pred             HHHHHHHhcCCC---CChhhE----------------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCChhH
Confidence            999984   432   234444                      66999999999998765  457 89999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++..|++                                                                      
T Consensus       128 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  207 (388)
T 1j32_A          128 PEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK  207 (388)
T ss_dssp             HHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             HHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence            9888877654                                                                      


Q ss_pred             ----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 ----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 ----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                                          ....+....++|..++.++...|...  
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~--  285 (388)
T 1j32_A          208 ILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS--  285 (388)
T ss_dssp             CBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC--
T ss_pred             cccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC--
Confidence                                                                01112222344555665554445321  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecC-----CCHH-HHHHHHHhCCeEEeCC----
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKD----  395 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~-----l~~~-~v~~Ll~e~~Vy~~p~----  395 (420)
                       .   +.++.++++++++|+.+.+.|+++ |    |..+.++.|+|.|..     .+.+ .++.|++++||++.|+    
T Consensus       286 -~---~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~  357 (388)
T 1j32_A          286 -Q---DCVQEMLAAFAERRRYMLDALNAMPG----LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG  357 (388)
T ss_dssp             -S---HHHHHHHHHHHHHHHHHHHHHHTCTT----CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred             -c---HHHHHHHHHHHHHHHHHHHHHhhCCC----CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC
Confidence             2   335566789999999999999986 4    666677888888863     3444 4577877799999874    


Q ss_pred             --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                        +  ||+++ .+.++++...++|.+++
T Consensus       358 ~~~~iRis~~-~~~~~i~~~~~~l~~~l  384 (388)
T 1j32_A          358 ADDCIRLSYA-TDLDTIKRGMERLEKFL  384 (388)
T ss_dssp             CTTBEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEec-CCHHHHHHHHHHHHHHH
Confidence              2  99997 67888888888887764

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.66  E-value=4.1e-15  Score=150.13  Aligned_cols=216  Identities=14%  Similarity=0.140  Sum_probs=158.0

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~  234 (420)
                      +.++|||++|.   ++  .+.++.|.+|......+    ...+.|.|..|.++|++++++++...  ..++++.|     
T Consensus        55 ~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~--~~~~~~~i-----  122 (432)
T 3ei9_A           55 DAQVISLGIGD---TT--EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG--LGIGDDDV-----  122 (432)
T ss_dssp             TCCCEECSSCC---CC--SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTT--TTCCGGGE-----
T ss_pred             CCCeEEccCCC---CC--CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHcc--CCCCcceE-----
Confidence            45899999995   33  46677777776665542    24468999999999999999998521  11234444     


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc------------c----
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL------------E----  298 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~------------~----  298 (420)
                                       +.|.|++.++.+...+   +.| ||.|++++|+|++|...++.+|.            +    
T Consensus       123 -----------------~~t~G~~~al~~l~~l---~~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  181 (432)
T 3ei9_A          123 -----------------FVSDGAKCDISRLQVM---FGS-NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM  181 (432)
T ss_dssp             -----------------EEESCHHHHHHHHHHH---HCT-TCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE
T ss_pred             -----------------EECCChHHHHHHHHHH---cCC-CCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe
Confidence                             6799999999875443   347 99999999999999988877662            1    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       182 ~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~  261 (432)
T 3ei9_A          182 RCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV  261 (432)
T ss_dssp             ECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGT
T ss_pred             ccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCe
Confidence                                                                                            


Q ss_pred             ------------------------hhh---------------hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q psy16707        299 ------------------------KIL---------------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMAD  339 (420)
Q Consensus       299 ------------------------~~~---------------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~  339 (420)
                                              ..+               ....+++++..++.++..+|.+.     -.++++.+++
T Consensus       262 ~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~  336 (432)
T 3ei9_A          262 AMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPE-----GLEAMHKVIG  336 (432)
T ss_dssp             EEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHH-----HHHHHHHHHH
T ss_pred             EEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcc-----cHHHHHHHHH
Confidence                                    111               12345667788888777766532     1245667779


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----HHHHHHHHHhCCeEEeCC--------C--cEEEcccCC
Q psy16707        340 RIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----ATQVEKLIKEHSVYLTKD--------G--RISMAGVTS  405 (420)
Q Consensus       340 r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~  405 (420)
                      +++++|+.+.+.|++.|    |..+.++.|+|.|+.++    .++++.|++++||++.|+        +  |||++ .+.
T Consensus       337 ~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~-~~~  411 (432)
T 3ei9_A          337 FYKENTNIIIDTFTSLG----YDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF-GHR  411 (432)
T ss_dssp             HHHHHHHHHHHHHHHTT----CCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCH
T ss_pred             HHHHHHHHHHHHHHHCC----ceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec-CCH
Confidence            99999999999999987    67777788999997653    356788989999999874        2  99986 466


Q ss_pred             CCHHHHHHHHHH
Q psy16707        406 KNVGYLAKAIHA  417 (420)
Q Consensus       406 ~ni~~la~AI~~  417 (420)
                      ++|+...+.|.+
T Consensus       412 e~l~~~l~rl~~  423 (432)
T 3ei9_A          412 ENILEACRRFKQ  423 (432)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            677776666654

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.65  E-value=1.2e-14  Score=144.11  Aligned_cols=238  Identities=15%  Similarity=0.105  Sum_probs=165.7

Q ss_pred             CcccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        130 LPIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       130 ~p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      +|+.++++ +..+..+.+..+.+..+.   ++.|||+.|.+   +  +..++.|.+|.....++ ....|.+..|.++|+
T Consensus         4 ~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~---~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~   73 (386)
T 1u08_A            4 NPLIPQSK-LPQLGTTIFTQMSALAQQ---HQAINLSQGFP---D--FDGPRYLQERLAHHVAQ-GANQYAPMTGVQALR   73 (386)
T ss_dssp             -CCCCCCS-CCCCCCCHHHHHHHHHHH---TTCEECCCSSC---S--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHH
T ss_pred             CCCccchh-hhcCCccHHHHHHHHHhc---CCeEEecCCCC---C--CCCCHHHHHHHHHHHHh-hccCCCCCCCCHHHH
Confidence            45666666 777777666555544432   46899999972   2  34567888887776643 357899999999999


Q ss_pred             HHHHHHH---cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC
Q psy16707        210 KLAAQLA---YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW  285 (420)
Q Consensus       210 ~a~~~~~---~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w  285 (420)
                      +++++++   +|..   ++++ .|                      +.|.|||.++.+++..+  +.| ||.|++++|+|
T Consensus        74 ~~la~~l~~~~g~~---~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~  125 (386)
T 1u08_A           74 EAIAQKTERLYGYQ---PDADSDI----------------------TVTAGATEALYAAITAL--VRN-GDEVICFDPSY  125 (386)
T ss_dssp             HHHHHHHHHHHSCC---CCTTTTE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCC
T ss_pred             HHHHHHHHHHhCCC---CCCCCCE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEeCCCc
Confidence            9999998   5643   2344 55                      56999999999998765  457 89999999999


Q ss_pred             CCcHHHHhhcCcc-------------------------------------------------------------------
Q psy16707        286 GNHIPICKHTGLE-------------------------------------------------------------------  298 (420)
Q Consensus       286 ~ny~~i~~~aG~~-------------------------------------------------------------------  298 (420)
                      +.|...++..|++                                                                   
T Consensus       126 ~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~  205 (386)
T 1u08_A          126 DSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVY  205 (386)
T ss_dssp             TTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTT
T ss_pred             hhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccc
Confidence            9999988877764                                                                   


Q ss_pred             --------------------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChh
Q psy16707        299 --------------------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPK  325 (420)
Q Consensus       299 --------------------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~  325 (420)
                                                                        .   ...+....+++..++.++...|.+. 
T Consensus       206 ~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-  284 (386)
T 1u08_A          206 EHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE-  284 (386)
T ss_dssp             TTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-
T ss_pred             cccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC-
Confidence                                                              0   0011112233445555555444321 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CHH-HHHHHHHhCCeEEeCC---
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NAT-QVEKLIKEHSVYLTKD---  395 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~~-~v~~Ll~e~~Vy~~p~---  395 (420)
                           .+.++.++++++++|+.+.+.|++.|    |....++.|+|.|+.+      +.+ .+++|++++||++.|+   
T Consensus       285 -----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f  355 (386)
T 1u08_A          285 -----PEHYLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVF  355 (386)
T ss_dssp             -----THHHHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGG
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHh
Confidence                 23455677999999999999999876    6666778899998643      344 4477888999999763   


Q ss_pred             -------C--cEEEcccCCCCHHHHHHHHH
Q psy16707        396 -------G--RISMAGVTSKNVGYLAKAIH  416 (420)
Q Consensus       396 -------g--Ris~agl~~~ni~~la~AI~  416 (420)
                             +  |||++ .++++|+.+.++|.
T Consensus       356 ~~~~~~~~~iRis~~-~~~~~i~~~~~~l~  384 (386)
T 1u08_A          356 CADPFPHKLIRLCFA-KKESTLLAAAERLR  384 (386)
T ss_dssp             CSSCCCSCEEEEECC-SCHHHHHHHHHHHT
T ss_pred             CCCCCCCCEEEEEEc-CCHHHHHHHHHHHh
Confidence                   1  99997 36666666666654

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.64  E-value=4.3e-15  Score=146.30  Aligned_cols=229  Identities=9%  Similarity=0.026  Sum_probs=167.2

Q ss_pred             cCCChHHHHHHHHHc-cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---c
Q psy16707        142 VKVPSSNLLTEAFKK-DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---Y  217 (420)
Q Consensus       142 ~~~d~i~~l~~~~~~-d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~  217 (420)
                      +++++++.+.+.+++ +...+.|||+.|.   +  .+++++.|.+|......  ....|.+..|.+++|+++++++   +
T Consensus         4 ~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---~--~~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~   76 (376)
T 3ezs_A            4 FEPYPFERLRALLKEITPKKRGLDLGIGE---P--QFETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRF   76 (376)
T ss_dssp             CCCCHHHHHHHHHTTCCCSSCCCBCSSCC---C--CSCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHhhhccCCEEEeCCCC---C--CCCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            467788888877765 2233899999996   2  23466888888776542  4678999999999999999998   4


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC-CCEEEEcCCCCCCcHHHHhhcC
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG-EKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~-gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      |..   +++++|                      +.|.|||+++.+++..+..  |. ||+|++++|+|+.|...++..|
T Consensus        77 g~~---~~~~~i----------------------~~t~g~~~al~~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g  129 (376)
T 3ezs_A           77 KIE---LKENEL----------------------ISTLGSREVLFNFPSFVLF--DYQNPTIAYPNPFYQIYEGAAKFIK  129 (376)
T ss_dssp             SCC---CCGGGE----------------------EEESSSHHHHHHHHHHHTT--TCSSCEEEEEESCCTHHHHHHHHTT
T ss_pred             CCC---CCHHHE----------------------EECcCcHHHHHHHHHHHcC--CCCCCEEEEecCCcHhHHHHHHHcC
Confidence            542   234555                      6699999999998876532  31 6999999999999999988887


Q ss_pred             cc-----------------------------------------------------------------------------h
Q psy16707        297 LE-----------------------------------------------------------------------------K  299 (420)
Q Consensus       297 ~~-----------------------------------------------------------------------------~  299 (420)
                      ++                                                                             .
T Consensus       130 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  209 (376)
T 3ezs_A          130 AKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLL  209 (376)
T ss_dssp             CEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHH
T ss_pred             CEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHH
Confidence            64                                                                             0


Q ss_pred             h---------------------------------------------hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        300 I---------------------------------------------LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       300 ~---------------------------------------------~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                      .                                             .......+++..++.++...|.+       .+.+
T Consensus       210 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~  282 (376)
T 3ezs_A          210 EACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD-------DRHA  282 (376)
T ss_dssp             HHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC-------SHHH
T ss_pred             HccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-------cHHH
Confidence            0                                             00111223455556555555543       1346


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--HHHHHHHHHhCCeEEeCC----------C--cEEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--ATQVEKLIKEHSVYLTKD----------G--RISM  400 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--~~~v~~Ll~e~~Vy~~p~----------g--Ris~  400 (420)
                      +.++++++++|+.+.+.|+  |    |.  .++.|+|.|+.++  .+.+++|++++||++.|+          +  |||+
T Consensus       283 ~~~~~~~~~~~~~l~~~l~--~----~~--~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~  354 (376)
T 3ezs_A          283 EFFRNIYANNLKLARKIFK--N----TL--IYPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLAL  354 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHST--T----CC--CCSBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhc--C----CC--CCCcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEE
Confidence            7777999999999999887  4    54  6688999997764  455678877799999763          1  9999


Q ss_pred             cccCCCCHHHHHHHHHHHhC
Q psy16707        401 AGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       401 agl~~~ni~~la~AI~~vv~  420 (420)
                      ++ +.++++.+.++|.++++
T Consensus       355 ~~-~~~~i~~~l~~l~~~l~  373 (376)
T 3ezs_A          355 VY-DTPLLEKPLEIIETYRE  373 (376)
T ss_dssp             CS-CHHHHHHHHHHHHHHHC
T ss_pred             cC-CHHHHHHHHHHHHHHHH
Confidence            85 88999999999998763

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.64  E-value=5e-15  Score=154.37  Aligned_cols=212  Identities=13%  Similarity=0.156  Sum_probs=152.0

Q ss_pred             CchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCC-ccccCCceeeecccCCCCccccccccccceeec
Q psy16707        178 YVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDC-PQLKDNLISIVQGISGTGSLRVGAAFQISIVQG  254 (420)
Q Consensus       178 ~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt  254 (420)
                      .+...++++.+.+....  ....|.+..|.+++|+++++++...++ ...+++.|                      +.|
T Consensus       102 ~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i----------------------~~t  159 (498)
T 3ihj_A          102 FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNI----------------------YLT  159 (498)
T ss_dssp             SCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGE----------------------EEE
T ss_pred             CCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccE----------------------EEc
Confidence            45666666655554322  346899999999999999999853221 22345555                      669


Q ss_pred             ccchHHHHHHHHHHHhcCCCCC----EEEEcCCCCCCcHHHHhhcCcc--------------------------------
Q psy16707        255 ISGTGSLRVGAAFLKNFFPGEK----VIYVPTPTWGNHIPICKHTGLE--------------------------------  298 (420)
Q Consensus       255 ~gGtgal~~~~~~l~~~~p~gd----~VlvpdP~w~ny~~i~~~aG~~--------------------------------  298 (420)
                      .|++.++.+++..+  +.+ ||    .|++|+|+|++|...++.+|++                                
T Consensus       160 ~G~~~ai~~~~~~l--~~~-gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~  236 (498)
T 3ihj_A          160 TGASDGISTILKIL--VSG-GGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDP  236 (498)
T ss_dssp             SSHHHHHHHHHHHH--CCC-CGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEE
T ss_pred             CCHHHHHHHHHHHH--cCC-CCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCC
Confidence            99999999998766  346 54    9999999999999988887764                                


Q ss_pred             -------------------------------------------------------hh-----------------------
Q psy16707        299 -------------------------------------------------------KI-----------------------  300 (420)
Q Consensus       299 -------------------------------------------------------~~-----------------------  300 (420)
                                                                             ..                       
T Consensus       237 k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK  316 (498)
T 3ihj_A          237 KVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSK  316 (498)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSS
T ss_pred             eEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEecccc
Confidence                                                                   00                       


Q ss_pred             ---------------------------hhhhccCCCchHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        301 ---------------------------LIRAFYSSPPIHGARIVQEILGDPK----LKAQWLTEVKGMADRIISMRQSLK  349 (420)
Q Consensus       301 ---------------------------~~r~~~s~pp~~ga~iv~~IL~dp~----L~~~w~~el~~m~~r~~~~R~~l~  349 (420)
                                                 ..++.+++++..+|.++..++++|+    ...+|.++++.++++++++|+.+.
T Consensus       317 ~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~  396 (498)
T 3ihj_A          317 GYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTE  396 (498)
T ss_dssp             STTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                       0012334667788888887787642    445788899999999999999999


Q ss_pred             HHHHhc-CCCCCCcccCCCCceEEec---------------CCCHHH--HHHHHHhCCeEEeCC-------C----cEEE
Q psy16707        350 DNLQKE-GSNKPWNHITDQIGMFCYT---------------GLNATQ--VEKLIKEHSVYLTKD-------G----RISM  400 (420)
Q Consensus       350 ~~L~~~-g~~~~w~~i~~q~GmF~~~---------------~l~~~~--v~~Ll~e~~Vy~~p~-------g----Ris~  400 (420)
                      +.|+++ |    |....+++|||.|.               |++.+.  +.+|++++||++.|+       |    ||++
T Consensus       397 ~~L~~~~g----~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~  472 (498)
T 3ihj_A          397 DLFNQVPG----IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI  472 (498)
T ss_dssp             HHHHTSTT----EECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC
T ss_pred             HHHhcCCC----cEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe
Confidence            999986 4    77788899999995               233333  678889999999873       2    9999


Q ss_pred             cccCCCCHHHHHHHHHHHh
Q psy16707        401 AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       401 agl~~~ni~~la~AI~~vv  419 (420)
                      + .+.++++.+.++|.+++
T Consensus       473 ~-~~~e~l~~~i~~L~~~~  490 (498)
T 3ihj_A          473 L-PPVEKLKTVLQKVKDFH  490 (498)
T ss_dssp             C-SCHHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHH
Confidence            6 77788888888887764

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.63  E-value=1.4e-15  Score=151.21  Aligned_cols=236  Identities=14%  Similarity=0.117  Sum_probs=163.7

Q ss_pred             chhhhcccc--CCChHHHHHHHH---Hcc-CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCC---CCCCCCCCC
Q psy16707        134 FQDARTSSV--KVPSSNLLTEAF---KKD-TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL---DKEYAPIIG  204 (420)
Q Consensus       134 ~~~~~~~~~--~~d~i~~l~~~~---~~d-~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~---~~~Y~p~~G  204 (420)
                      ++++ ...+  ..+.+..+.+..   .+. ...+.|||+.|.   ++.  ++++.|++|......+..   .+.|.|..|
T Consensus         4 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g   77 (398)
T 3ele_A            4 VNES-MYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGN---PSI--PAPQIVNDTIKELVTDYDSVALHGYTSAQG   77 (398)
T ss_dssp             SCHH-HHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCC---CCS--CCCHHHHHHHHHHHHHSCHHHHHSCCCTTC
T ss_pred             hhHH-HhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCC---CCC--CCCHHHHHHHHHHHhcCCccccCCcCCCCC
Confidence            4444 4444  355555554333   222 235789999994   544  467788888777664421   578999999


Q ss_pred             CHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCC-CEEEE
Q psy16707        205 APDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-KVIYV  280 (420)
Q Consensus       205 ~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-d~Vlv  280 (420)
                      .++||+++++++   +|..   +++++|                      +.|.|||+|+.+++..+  +.| | |+|++
T Consensus        78 ~~~lr~~la~~l~~~~g~~---~~~~~i----------------------~~~~g~~~al~~~~~~l--~~~-g~d~vl~  129 (398)
T 3ele_A           78 DVETRAAIAEFLNNTHGTH---FNADNL----------------------YMTMGAAASLSICFRAL--TSD-AYDEFIT  129 (398)
T ss_dssp             CHHHHHHHHHHHHHHHCCC---CCGGGE----------------------EEESSHHHHHHHHHHHH--CCS-TTCEEEE
T ss_pred             cHHHHHHHHHHHHHHhCCC---CChHHE----------------------EEccCHHHHHHHHHHHH--cCC-CCCEEEE
Confidence            999999999998   4432   334555                      66999999999998765  457 9 99999


Q ss_pred             cCCCCCCcHHHHhhcCcc--------------------------------------------------------------
Q psy16707        281 PTPTWGNHIPICKHTGLE--------------------------------------------------------------  298 (420)
Q Consensus       281 pdP~w~ny~~i~~~aG~~--------------------------------------------------------------  298 (420)
                      ++|+|+.|...++..|++                                                              
T Consensus       130 ~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~  209 (398)
T 3ele_A          130 IAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIG  209 (398)
T ss_dssp             ESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             eCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccC
Confidence            999999999998888764                                                              


Q ss_pred             ------------------------------------------------------hh------h-------hhh-ccCCCc
Q psy16707        299 ------------------------------------------------------KI------L-------IRA-FYSSPP  310 (420)
Q Consensus       299 ------------------------------------------------------~~------~-------~r~-~~s~pp  310 (420)
                                                                            ..      +       .+. .+.++|
T Consensus       210 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (398)
T 3ele_A          210 RPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAP  289 (398)
T ss_dssp             SCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCC
Confidence                                                                  00      0       000 123334


Q ss_pred             hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHh
Q psy16707        311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKE  387 (420)
Q Consensus       311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e  387 (420)
                      ...+.++..+|.+..           ++++++++|+.+.+.|+++|    |..+.++.|+|.|+.+   +.+.+...+.+
T Consensus       290 ~~~~~a~~~~l~~~~-----------~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  354 (398)
T 3ele_A          290 SLFQKMIVKCQGATG-----------DINAYKENRDLLYEGLTRIG----YHCFKPDGAFYMFVKALEDDSNAFCEKAKE  354 (398)
T ss_dssp             HHHHHHHTTCTTCCC-----------CHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECSSSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHcC----CeecCCCeeEEEEEEcCCCCHHHHHHHHHH
Confidence            444443333333221           34678899999999999887    6777888999898754   34444444578


Q ss_pred             CCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        388 HSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       388 ~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +||++.|+.        |||++ .+.++|+++.++|.+++
T Consensus       355 ~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l  393 (398)
T 3ele_A          355 EDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPAFEKIY  393 (398)
T ss_dssp             TTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             CCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence            999998852        99997 78899999999988875

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.62  E-value=1.9e-14  Score=144.23  Aligned_cols=236  Identities=13%  Similarity=0.122  Sum_probs=165.9

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA  213 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~  213 (420)
                      ++++ +..++.+++..+.+..+   .++.|||+.|.   ++  +..++.|.+|.....++ ....|.+..|.++|+++++
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la   72 (411)
T 2o0r_A            3 TVSR-LRPYATTVFAEMSALAT---RIGAVNLGQGF---PD--EDGPPKMLQAAQDAIAG-GVNQYPPGPGSAPLRRAIA   72 (411)
T ss_dssp             CCGG-GGGGSSCHHHHHHHHHH---TTTCEESSCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHH
T ss_pred             hhhH-hHhcCccHHHHHHHHhh---cCCeeeccCcC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHH
Confidence            4555 66777776665554443   24689999996   32  33567788777776653 3578999999999999999


Q ss_pred             HHH---cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        214 QLA---YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       214 ~~~---~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      +++   +|..   ++++ .|                      +.|.|||+|+.+++..+  +.| ||+|++++|+|+.|.
T Consensus        73 ~~~~~~~g~~---~~~~~~v----------------------~~t~g~~~al~~~~~~~--~~~-gd~Vl~~~~~y~~~~  124 (411)
T 2o0r_A           73 AQRRRHFGVD---YDPETEV----------------------LVTVGATEAIAAAVLGL--VEP-GSEVLLIEPFYDSYS  124 (411)
T ss_dssp             HHHHHHHCCC---CCTTTSE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHH
T ss_pred             HHHHHHcCCC---CCCCceE----------------------EEeCCHHHHHHHHHHHh--cCC-CCEEEEeCCCcHhHH
Confidence            998   3543   2333 45                      56999999999998755  457 899999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      ..++..|++                                                                       
T Consensus       125 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  204 (411)
T 2o0r_A          125 PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH  204 (411)
T ss_dssp             HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence            888776643                                                                       


Q ss_pred             ------------------------------------------------h---hhhhh-ccCCCchHHHHHHHHHhCChhh
Q psy16707        299 ------------------------------------------------K---ILIRA-FYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 ------------------------------------------------~---~~~r~-~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                                      .   ..... .++ ++...+.++...|.+.  
T Consensus       205 ~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~a~~~~l~~~--  281 (411)
T 2o0r_A          205 LVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYV-GGAPFQPAVALALDTE--  281 (411)
T ss_dssp             CBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTSC-CCTTHHHHHHHHHHHC--
T ss_pred             cccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccCC-CChHHHHHHHHHHhCC--
Confidence                                                            0   01111 232 3344454444444211  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCC----
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKD----  395 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~----  395 (420)
                          .+.++.++++++++|+.+.+.|++.|    |....++.|+|.|+.+      +. +.+++|++++||++.|+    
T Consensus       282 ----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~  353 (411)
T 2o0r_A          282 ----DAWVAALRNSLRARRDRLAAGLTEIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFC  353 (411)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGS
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHHHHcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhC
Confidence                23456677999999999999999886    6767778899988643      33 45577888899999652    


Q ss_pred             -------------C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 -------------G----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -------------g----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                                   +    |||++ .++++++.+.++|.+++
T Consensus       354 ~~~~~~~~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~~  393 (411)
T 2o0r_A          354 DPAAGQASQQADVWNHLVRFTFC-KRDDTLDEAIRRLSVLA  393 (411)
T ss_dssp             CCC--------CCGGGCEEEECC-SCHHHHHHHHHHHGGGG
T ss_pred             CCccccccccccCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence                         2    99997 47778888888887764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.62  E-value=3.5e-14  Score=141.46  Aligned_cols=247  Identities=17%  Similarity=0.199  Sum_probs=171.5

Q ss_pred             chhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFG  209 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr  209 (420)
                      ++++ +..+.+.++..+.+..++  .++.+.|||+.|.   ++....+.+.|.+|.....++.  ... |.+..|.++++
T Consensus         7 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~---~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~   81 (407)
T 2zc0_A            7 LAGR-ANWIKGSALADVMKKASELQKKGVKLISLAAGD---PDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELR   81 (407)
T ss_dssp             SCGG-GGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCC---CCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHH
T ss_pred             hhhh-hccCCchHHHHHHHhhhcccCCCCceEeCCCCC---CCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHH
Confidence            4455 666777777766665542  2334789999997   3332346778888776665432  235 99999999999


Q ss_pred             HHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707        210 KLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG  286 (420)
Q Consensus       210 ~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~  286 (420)
                      +++++++   +|.+   .+++.|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+
T Consensus        82 ~~la~~~~~~~g~~---~~~~~v----------------------~~t~g~t~a~~~~~~~~--~~~-gd~vl~~~p~~~  133 (407)
T 2zc0_A           82 EELAAFLKKYDHLE---VSPENI----------------------VITIGGTGALDLLGRVL--IDP-GDVVITENPSYI  133 (407)
T ss_dssp             HHHHHHHHHHSCCC---CCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCH
T ss_pred             HHHHHHHHHhcCCC---CCcceE----------------------EEecCHHHHHHHHHHHh--cCC-CCEEEEeCCChH
Confidence            9999998   4532   234444                      56999999999998766  457 899999999999


Q ss_pred             CcHHHHhhcCcc--------------------------------------------------------------------
Q psy16707        287 NHIPICKHTGLE--------------------------------------------------------------------  298 (420)
Q Consensus       287 ny~~i~~~aG~~--------------------------------------------------------------------  298 (420)
                      .|...++..|++                                                                    
T Consensus       134 ~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~  213 (407)
T 2zc0_A          134 NTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIE  213 (407)
T ss_dssp             HHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            887665544431                                                                    


Q ss_pred             ----------------------------------------------------hhh---hhhccCCCchHHHHHHHHHhCC
Q psy16707        299 ----------------------------------------------------KIL---IRAFYSSPPIHGARIVQEILGD  323 (420)
Q Consensus       299 ----------------------------------------------------~~~---~r~~~s~pp~~ga~iv~~IL~d  323 (420)
                                                                          ..+   ......+++...+.++...|.+
T Consensus       214 De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  293 (407)
T 2zc0_A          214 DTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKR  293 (407)
T ss_dssp             ECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHT
T ss_pred             ECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHc
Confidence                                                                000   0111123355666666665643


Q ss_pred             hhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC--
Q psy16707        324 PKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD--  395 (420)
Q Consensus       324 p~L~~~w~-~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~--  395 (420)
                      .    .|. +.++.++++++++|+.+.+.|++.. ++ |..+.++.|+|.|+.+    +. +.++.|++++||++.|+  
T Consensus       294 ~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~  367 (407)
T 2zc0_A          294 G----YFEKYHLEGALLGYKEKRDIMLKALENHL-PN-AEFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKP  367 (407)
T ss_dssp             T----HHHHHTTTTHHHHHHHHHHHHHHHHHHHC-TT-SCBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGG
T ss_pred             C----CchHHHHHHHHHHHHHHHHHHHHHHHHhC-CC-CEEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchh
Confidence            2    344 5577778999999999999998752 11 5656677899998654    33 45578877779999874  


Q ss_pred             --------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                              +  |||++..+.++++.+.++|.+++
T Consensus       368 ~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l  401 (407)
T 2zc0_A          368 FYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLY  401 (407)
T ss_dssp             GCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence                    2  99998778899999999988765

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.61  E-value=4.5e-15  Score=149.35  Aligned_cols=237  Identities=12%  Similarity=0.099  Sum_probs=164.5

Q ss_pred             HHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccC
Q psy16707        147 SNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKD  226 (420)
Q Consensus       147 i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~  226 (420)
                      ++.....+..+.+++.|||+.|.   +  ..++++.|.+|......+.....|.+..|.+++|+++++++....+..+++
T Consensus        31 ~~~~~~~~~~~~g~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~  105 (437)
T 3g0t_A           31 LVALVTNLEKATGTKFCRMEMGV---P--GLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA  105 (437)
T ss_dssp             HHHHHHHHHHHHTCCCEECCCCS---C--CSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred             HHHHHHHHHHhcCCCEEeccCcC---C--CCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc
Confidence            44444445455678899999997   2  245678888877776653223889999999999999999985322222344


Q ss_pred             CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC--EEEEcCCCCCCcHHHHhhcCcc------
Q psy16707        227 NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK--VIYVPTPTWGNHIPICKHTGLE------  298 (420)
Q Consensus       227 ~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd--~VlvpdP~w~ny~~i~~~aG~~------  298 (420)
                      +.|                      +.|.|||+++.+++..+..+.| ||  +|++++|+|+.|...++..|++      
T Consensus       106 ~~i----------------------~~t~g~t~al~~~~~~l~~~~~-gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~  162 (437)
T 3g0t_A          106 RAC----------------------VPTVGSMQGCFVSFLVANRTHK-NREYGTLFIDPGFNLNKLQCRILGQKFESFDL  162 (437)
T ss_dssp             GGE----------------------EEESHHHHHHHHHHHHHTTSCT-TCSCCEEEEESCCHHHHHHHHHHTCCCEEEEG
T ss_pred             ccE----------------------EEeCCHHHHHHHHHHHHhcCCC-CCccEEEEeCCCcHhHHHHHHHcCCEEEEEee
Confidence            545                      6699999999999876531157 89  9999999999999888877764      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       163 ~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (437)
T 3g0t_A          163 FEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQ  242 (437)
T ss_dssp             GGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCC
T ss_pred             cCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchh
Confidence                                                                                            


Q ss_pred             -------------------------------------h-h-----------------hh---hhccCCCchHHHHHHHHH
Q psy16707        299 -------------------------------------K-I-----------------LI---RAFYSSPPIHGARIVQEI  320 (420)
Q Consensus       299 -------------------------------------~-~-----------------~~---r~~~s~pp~~ga~iv~~I  320 (420)
                                                           . .                 +.   +....+++..++.++...
T Consensus       243 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  322 (437)
T 3g0t_A          243 PSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAM  322 (437)
T ss_dssp             CCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHH
T ss_pred             hccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHH
Confidence                                                 0 0                 00   000122333333333333


Q ss_pred             hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-------CCCCceEEecC---CCHHH-HHHHHHhCC
Q psy16707        321 LGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-------TDQIGMFCYTG---LNATQ-VEKLIKEHS  389 (420)
Q Consensus       321 L~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-------~~q~GmF~~~~---l~~~~-v~~Ll~e~~  389 (420)
                      |.+.   .+|.++++.++++++++|+.+.+.|+++|    |...       +++.|+|.|+.   .+.+. +++|+ ++|
T Consensus       323 l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~g  394 (437)
T 3g0t_A          323 LKAC---NDGEYNFRDSVIEYGRKARIMKKMFLDNG----FNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFV-RYG  394 (437)
T ss_dssp             HHHH---HTTSCCHHHHHHHHHHHHHHHHHHHHTTT----EEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHH-HTT
T ss_pred             HhCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHcC----CEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHH-HcC
Confidence            3210   12322277888999999999999999886    5655       33889999864   34544 46664 679


Q ss_pred             eEEeCCC----------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        390 VYLTKDG----------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       390 Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |++.|+.          |||++..+.++++++.++|.+++
T Consensus       395 i~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~  434 (437)
T 3g0t_A          395 MCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLN  434 (437)
T ss_dssp             EECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHH
T ss_pred             eEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence            9998752          99999889999999999999875

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.61  E-value=1.6e-15  Score=154.96  Aligned_cols=228  Identities=10%  Similarity=0.000  Sum_probs=164.1

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCC--CCCCC-C---CHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKE--YAPII-G---APDFGKLAAQLAYGEDCPQLKDNLISIVQ  233 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~--Y~p~~-G---~~~fr~a~~~~~~g~~~~~~~~~~i~~~~  233 (420)
                      ..+|||++|.   ++  +++++.|+++..........+.  |.+.. |   .++||+++++++.......+++++|    
T Consensus        56 ~~~i~l~~g~---~~--~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~i----  126 (427)
T 2hox_A           56 GCSADVASGD---GL--FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYI----  126 (427)
T ss_dssp             TCCEECCSCC---CG--GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEE----
T ss_pred             CceEEecCcC---CC--CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEE----
Confidence            4689999996   33  4566777777665542223344  99998 9   9999999999985333222345555    


Q ss_pred             ccCCCCccccccccccceeecccchHHHHHHHHHHHh------cCCCCCEEEEcCCCCCCcHHHHhhcCcc---------
Q psy16707        234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN------FFPGEKVIYVPTPTWGNHIPICKHTGLE---------  298 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~------~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------  298 (420)
                                        +.|.|+++++.+++..|..      +.| ||.|++++|+|+.|...++..|++         
T Consensus       127 ------------------v~t~G~~~al~~~~~~l~~~~~~~~~~~-Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~  187 (427)
T 2hox_A          127 ------------------VFGVGVTQLIHGLVISLSPNMTATPDAP-ESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA  187 (427)
T ss_dssp             ------------------EEESHHHHHHHHHHHHHSCCTTTCTTSC-CEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGG
T ss_pred             ------------------EEeCCHHHHHHHHHHHHhhccccccCCC-CCEEEEeCCCcccHHHHHHHcCCeeeeecCCHH
Confidence                              6799999999999876611      457 999999999999999999887764         


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       188 ~l~~~~~~~~k~v~l~~p~NPtG~~~~~~l~~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~  267 (427)
T 2hox_A          188 NYVNVSNPEQYIEMVTSPNNPEGLLRHAVIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKD  267 (427)
T ss_dssp             GGTTCSCGGGEEEEEESSCTTTCCCCCCSSTTCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC
T ss_pred             HHHHhhcCCceEEEEcCCCCCcccccHHHHcCCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECC
Confidence                                                                                            


Q ss_pred             -------hhhhhhccCCCchHHHHHHHHHhCChhhHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC----
Q psy16707        299 -------KILIRAFYSSPPIHGARIVQEILGDPKLKAQ--------WLTEVKGMADRIISMRQSLKDNLQKE-GSN----  358 (420)
Q Consensus       299 -------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~--------w~~el~~m~~r~~~~R~~l~~~L~~~-g~~----  358 (420)
                             .........+++...|.++..+|.+.   .+        |.+.++.++++++++|+.|.+.|++. |..    
T Consensus       268 ~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~  344 (427)
T 2hox_A          268 ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEV---VAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQEL  344 (427)
T ss_dssp             HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHH---HHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcc---hhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccc
Confidence                   11112233567778888777767542   22        34567788899999999999999986 421    


Q ss_pred             ---C---CCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        359 ---K---PWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       359 ---~---~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                         .   .|....++.|+|.|+.++   .++++.|++++||++.|+       +  |||++. +.++++...+.|.+++
T Consensus       345 ~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~~  422 (427)
T 2hox_A          345 PQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMV  422 (427)
T ss_dssp             CSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence               1   034456778999998764   356788888999999874       2  999985 6667777777777665

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.60  E-value=2.6e-14  Score=141.40  Aligned_cols=235  Identities=19%  Similarity=0.157  Sum_probs=165.9

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA  213 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~  213 (420)
                      ++++ +..+...++..+.+..+.   ++.|||+.|.   +  .++.++.|.++......+  ...|.+..|.++|+++++
T Consensus         3 ~~~~-~~~~~~~~~~~~~~~~~~---~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la   71 (381)
T 1v2d_A            3 LHPR-TEAAKESIFPRMSGLAQR---LGAVNLGQGF---P--SNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALA   71 (381)
T ss_dssp             CCGG-GGGC---CHHHHHHHHHH---HTCEECCCCS---C--SSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHH
T ss_pred             hhhh-hhhcCccHHHHHHHHHhc---CCeEEecCCC---C--CCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHH
Confidence            4454 666666666666655543   4689999996   2  234667888887776643  457999889999999999


Q ss_pred             HHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707        214 QLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK  293 (420)
Q Consensus       214 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~  293 (420)
                      +++ +.+     ++.|                      +.|.|||.|+.+++..+  +.| ||+|++++|+|+.|...++
T Consensus        72 ~~~-~~~-----~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~Vl~~~~~~~~~~~~~~  120 (381)
T 1v2d_A           72 EEF-AVE-----PESV----------------------VVTSGATEALYVLLQSL--VGP-GDEVVVLEPFFDVYLPDAF  120 (381)
T ss_dssp             HHH-TSC-----GGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHH
T ss_pred             Hhc-CCC-----hhhE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHHHH
Confidence            984 432     3344                      67999999999998765  457 8999999999999998877


Q ss_pred             hcCcc---------------------------------------------------------------------------
Q psy16707        294 HTGLE---------------------------------------------------------------------------  298 (420)
Q Consensus       294 ~aG~~---------------------------------------------------------------------------  298 (420)
                      ..|++                                                                           
T Consensus       121 ~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g  200 (381)
T 1v2d_A          121 LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYG  200 (381)
T ss_dssp             HTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSS
T ss_pred             HcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence            66532                                                                           


Q ss_pred             -----------------------------------------h---hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 -----------------------------------------K---ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 -----------------------------------------~---~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                               .   ........+++...+.++...|..    ..+.+.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~  276 (381)
T 1v2d_A          201 ERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKL----ARREGFY  276 (381)
T ss_dssp             SCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHH----HHHTTHH
T ss_pred             CCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC----cccHHHH
Confidence                                                     0   001112234455566555554431    1223456


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC----------C--cEEEcc
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD----------G--RISMAG  402 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~----------g--Ris~ag  402 (420)
                      +.++++++++|+.+.+.|++.|    |..+.++.|+|.|+.++...+..+++++||++.|+          +  ||+++.
T Consensus       277 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~  352 (381)
T 1v2d_A          277 EALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAELPGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK  352 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEECTTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC----CEecCCCcceEEEEecChHhHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC
Confidence            6777999999999999999976    66677778999987554212777788999999763          2  999987


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                       +.++++.+.++|.+++
T Consensus       353 -~~~~i~~~~~~l~~~l  368 (381)
T 1v2d_A          353 -TEEELHLALERLGRVV  368 (381)
T ss_dssp             -CHHHHHHHHHHHHHHC
T ss_pred             -CHHHHHHHHHHHHHHH
Confidence             8888999999988875

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.60  E-value=7.7e-16  Score=155.74  Aligned_cols=251  Identities=12%  Similarity=0.159  Sum_probs=170.7

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHH----------HHHHHccCCCCCCCCCC
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQA----------DEIVLNKNLDKEYAPII  203 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a----------~~~~~~~~~~~~Y~p~~  203 (420)
                      +|++ +..+.++++..+.+.+.+. .++.|||+.|.   ||..+++.....++          .....   ....|.|..
T Consensus         7 ~s~~-~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~---p~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~   78 (425)
T 2r2n_A            7 ITAA-SAARNPSPIRTMTDILSRG-PKSMISLAGGL---PNPNMFPFKTAVITVENGKTIQFGEEMMK---RALQYSPSA   78 (425)
T ss_dssp             SCHH-HHTCCCCSGGGHHHHHHHS-CTTCEECCCCC---CCGGGCSEEEEEEEETTSCCEEECHHHHH---HHTSCCCTT
T ss_pred             HHHH-HhcCCCchHHHHHHHhhcC-CCCeEEcCCcC---CCchhCCHHHHHHHHhhcccccccccchh---hhcCCCCCC
Confidence            5565 7788889998888877653 35789999997   55433332211110          00011   135799999


Q ss_pred             CCHHHHHHHHHHH---cCCCCcccc----CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC
Q psy16707        204 GAPDFGKLAAQLA---YGEDCPQLK----DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK  276 (420)
Q Consensus       204 G~~~fr~a~~~~~---~g~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd  276 (420)
                      |.++||+++++++   +|.+...++    ++.|                      +.|.|+++++.+++..+  +.| ||
T Consensus        79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd  133 (425)
T 2r2n_A           79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDL----------------------CVTSGSQQGLCKVFEMI--INP-GD  133 (425)
T ss_dssp             CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEE----------------------EEESSHHHHHHHHHHHH--CCT-TC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCccccccCCcCcE----------------------EEeCcHHHHHHHHHHHh--CCC-CC
Confidence            9999999999998   454310000    1333                      67999999999998766  457 99


Q ss_pred             EEEEcCCCCCCcHHHHhhcCc-------------------------------------c---------------------
Q psy16707        277 VIYVPTPTWGNHIPICKHTGL-------------------------------------E---------------------  298 (420)
Q Consensus       277 ~VlvpdP~w~ny~~i~~~aG~-------------------------------------~---------------------  298 (420)
                      +|++++|+|+.|...++.+|+                                     +                     
T Consensus       134 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l  213 (425)
T 2r2n_A          134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERK  213 (425)
T ss_dssp             EEEEESSCCHHHHHHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHH
Confidence            999999999998866544321                                     1                     


Q ss_pred             -----------------------------------------------------------------------hhhhhhccC
Q psy16707        299 -----------------------------------------------------------------------KILIRAFYS  307 (420)
Q Consensus       299 -----------------------------------------------------------------------~~~~r~~~s  307 (420)
                                                                                             .........
T Consensus       214 ~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~~~~~~  293 (425)
T 2r2n_A          214 KEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTL  293 (425)
T ss_dssp             HHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHHHHhcC
Confidence                                                                                   111122234


Q ss_pred             CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHH
Q psy16707        308 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVE  382 (420)
Q Consensus       308 ~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~  382 (420)
                      +++..++.++...|++. ..+.|.++++.++++++++|+.+.+.|++.- ++-+....++.|+|.|+.++     .+++.
T Consensus       294 ~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~  371 (425)
T 2r2n_A          294 HPSTFNQLMISQLLHEW-GEEGFMAHVDRVIDFYSNQKDAILAAADKWL-TGLAEWHVPAAGMFLWIKVKGINDVKELIE  371 (425)
T ss_dssp             SSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEECCCSBSSEEEEEETTCSCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEeCCCceEEEEEEeCCCCCHHHHHH
Confidence            56777887777666431 1134667888999999999999999998751 11123456788999986432     34455


Q ss_pred             HHHHhCCeEEeCC-----------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        383 KLIKEHSVYLTKD-----------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       383 ~Ll~e~~Vy~~p~-----------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      .++.++||++.|+           +  |||++..+.+.++.+.++|.+++
T Consensus       372 ~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l  421 (425)
T 2r2n_A          372 EKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLI  421 (425)
T ss_dssp             THHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence            5557999999863           2  99998778899999999988775

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.60  E-value=3.7e-14  Score=142.25  Aligned_cols=241  Identities=12%  Similarity=0.090  Sum_probs=172.4

Q ss_pred             chhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      |+++ +..++++++..+.+.+++.  .+.+.|||+.|.+   +  ++.++.|.+|. ....+ ....|.+..|.++++++
T Consensus        16 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~---~--~~~~~~v~~a~-~~l~~-~~~~y~~~~g~~~l~~~   87 (409)
T 2gb3_A           16 FSDR-VLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQP---D--LKTPEVFFERI-YENKP-EVVYYSHSAGIWELREA   87 (409)
T ss_dssp             CCHH-HHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCC---C--SCCCTHHHHHH-HHTCC-SSCCCCCTTCCHHHHHH
T ss_pred             HHHH-hhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCC---C--CCCCHHHHHHH-HHHhc-CCCCCCCCCCcHHHHHH
Confidence            6777 7888888887776665443  3467899999973   2  33557777777 65543 35689999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+..++++.|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...
T Consensus        88 la~~~~~~~g~~~~~~~v----------------------~~~~g~t~a~~~~~~~~--~~~-gd~Vl~~~~~~~~~~~~  142 (409)
T 2gb3_A           88 FASYYKRRQRVDVKPENV----------------------LVTNGGSEAILFSFAVI--ANP-GDEILVLEPFYANYNAF  142 (409)
T ss_dssp             HHHHHHHTSCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHH
T ss_pred             HHHHHHHHhCCCCCHHHE----------------------EEeCCHHHHHHHHHHHh--CCC-CCEEEEcCCCchhHHHH
Confidence            999984322222334444                      67999999999998765  457 89999999999999877


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       143 ~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~  222 (409)
T 2gb3_A          143 AKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR  222 (409)
T ss_dssp             HHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred             HHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccC
Confidence            7654431                                                                         


Q ss_pred             -------------------------------------h-hhh-------hhccCCCchHHHHHHHHHhCChhhHHHHHHH
Q psy16707        299 -------------------------------------K-ILI-------RAFYSSPPIHGARIVQEILGDPKLKAQWLTE  333 (420)
Q Consensus       299 -------------------------------------~-~~~-------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e  333 (420)
                                                           . .+.       +... +++..++.++...|...   .   +.
T Consensus       223 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~---~---~~  295 (409)
T 2gb3_A          223 GEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLD---D---SF  295 (409)
T ss_dssp             SCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCC---H---HH
T ss_pred             CCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhcc---H---HH
Confidence                                                 1 111       1112 55666666666656431   2   34


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-cCCCCceEEecCC---CH-HHHHHHHHh-----CCeEEeCC--------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTGL---NA-TQVEKLIKE-----HSVYLTKD--------  395 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~-i~~q~GmF~~~~l---~~-~~v~~Ll~e-----~~Vy~~p~--------  395 (420)
                      ++.++++++++|+.+.+.|++.|    |.. ..++.|+|.|+.+   +. +.+++|+++     +||++.|+        
T Consensus       296 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~  371 (409)
T 2gb3_A          296 FDFVRETYRERVETVLKKLEEHG----LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPG  371 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCC
Confidence            56667899999999999999886    565 5677899998644   44 455778777     69999763        


Q ss_pred             ---C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 ---G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ---g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                         +  ||+++ .+.++++++.++|.+++
T Consensus       372 ~~~~~iRis~~-~~~e~i~~~~~~l~~~l  399 (409)
T 2gb3_A          372 LGKKEIRIACV-LEKDLLSRAIDVLMEGL  399 (409)
T ss_dssp             TTSSEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEeC-CCHHHHHHHHHHHHHHH
Confidence               2  99998 88888999999988765

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.59  E-value=1.4e-15  Score=160.02  Aligned_cols=221  Identities=12%  Similarity=0.067  Sum_probs=158.0

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCC-CCCCCHHHHHHHHHHHcCC-CC-cccc-CCceeeecccC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA-PIIGAPDFGKLAAQLAYGE-DC-PQLK-DNLISIVQGIS  236 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~-p~~G~~~fr~a~~~~~~g~-~~-~~~~-~~~i~~~~~~~  236 (420)
                      +.|||++|.+   +.  ++++.|+++.+.+..    ..|. |..|.++|++++++++... .. .... ++.        
T Consensus       104 ~~i~l~~g~~---~~--~~~~~v~a~~~~~~~----~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~--------  166 (533)
T 3f6t_A          104 DAVNYCHTEL---GL--NRDKVVAEWVNGAVA----NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTD--------  166 (533)
T ss_dssp             HHHHHHHHTT---CC--CHHHHHHHHHHHHHT----CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEE--------
T ss_pred             hheeccCCCC---Cc--CCcHHHHHHHHHHHh----CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcce--------
Confidence            3699999973   33  457777777776652    3454 8999999999999998221 11 0111 233        


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------  298 (420)
                                    ++.|.|||+|+.+++..+.   .+.| ||.|++++|+|++|..+++.+|++               
T Consensus       167 --------------i~~t~G~t~al~~~~~~l~~~~l~~~-gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~  231 (533)
T 3f6t_A          167 --------------LFPTEGGTAAIVYAFHSLAENHLLKK-GDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWE  231 (533)
T ss_dssp             --------------EEEEEHHHHHHHHHHHHHHHTTSSCT-TCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSE
T ss_pred             --------------EEEECCHHHHHHHHHHHhhhhhccCC-cCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCC
Confidence                          3679999999999887421   2457 899999999999999887776552               


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       232 ~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~  311 (533)
T 3f6t_A          232 IEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSY  311 (533)
T ss_dssp             ECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEES
T ss_pred             CCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecC
Confidence                                                                                            


Q ss_pred             -----------------hh-----hh---------------------------------------hhccCCCchHHHHHH
Q psy16707        299 -----------------KI-----LI---------------------------------------RAFYSSPPIHGARIV  317 (420)
Q Consensus       299 -----------------~~-----~~---------------------------------------r~~~s~pp~~ga~iv  317 (420)
                                       ..     ++                                       ....++++...|.++
T Consensus       312 SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~  391 (533)
T 3f6t_A          312 SKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIME  391 (533)
T ss_dssp             HHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHH
T ss_pred             cccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHH
Confidence                             11     11                                       122345555555542


Q ss_pred             HHHhCChhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---------------
Q psy16707        318 QEILGDPKLK-----AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------------  377 (420)
Q Consensus       318 ~~IL~dp~L~-----~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---------------  377 (420)
                      + ++...+|.     .+|.++++.++++|+++|+.|.+.|. .+    |.+..++.|||.|+.++               
T Consensus       392 a-~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~----~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~  465 (533)
T 3f6t_A          392 A-LFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-AP----KDETDTNTHYYSLIDIYRLAEKIYGKEFRDYL  465 (533)
T ss_dssp             H-HHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CC----CCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHH
T ss_pred             H-HHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CC----ccccCCCceEEEEEehHhhhhhccchHHHHHh
Confidence            2 11112333     34567888899999999999999996 55    77788899999986543               


Q ss_pred             ------HHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        378 ------ATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 ------~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                            .+++.+|++++||++.|+       +  |||++.+++++++++.++|.+++
T Consensus       466 ~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l  522 (533)
T 3f6t_A          466 TNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELL  522 (533)
T ss_dssp             HHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHH
T ss_pred             hccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHH
Confidence                  267788999999999985       3  99999999999999999998875

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.59  E-value=9.4e-15  Score=147.38  Aligned_cols=240  Identities=16%  Similarity=0.191  Sum_probs=159.6

Q ss_pred             CCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCc
Q psy16707        143 KVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCP  222 (420)
Q Consensus       143 ~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~  222 (420)
                      ...+++.+...+    .++.|||+.|.+. +-+.++..+.++.+.+.+ .+.....|.+..|.+++|+++++++.... .
T Consensus        34 ~~~~~~~~~~~~----~~~~i~l~~g~~~-~~~~~~~~~~~~a~~~~~-~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~  106 (430)
T 2x5f_A           34 YPKGILSQSAEA----KSTTYNATIGMAT-NKDGKMFASSLDAMFNDL-TPDEIFPYAPPQGIEELRDLWQQKMLRDN-P  106 (430)
T ss_dssp             CCCHHHHHHHHT----TTCSEECCCSSCE-ETTEECCCHHHHTTBSSC-CGGGTSSCCCTTCCHHHHHHHHHHHHHHC-T
T ss_pred             CchHHHHHHHhc----CCCcEEeeeeecc-CCCCchhhHHHHHHHHhc-CcccccccCCCCCCHHHHHHHHHHHhccC-c
Confidence            345566554443    4578999999843 223222222233322222 11135789999999999999999984322 1


Q ss_pred             cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhh-cCcc---
Q psy16707        223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKH-TGLE---  298 (420)
Q Consensus       223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~-aG~~---  298 (420)
                      .++++++                   .+++.|.|||+|+.+++..+  +.| ||.|++++|+|+.|...++. .|++   
T Consensus       107 ~~~~~~~-------------------~~i~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~~~~g~~~~~  164 (430)
T 2x5f_A          107 ELSIDNM-------------------SRPIVTNALTHGLSLVGDLF--VNQ-DDTILLPEHNWGNYKLVFNTRNGANLQT  164 (430)
T ss_dssp             TCCGGGB-------------------CCCEEESHHHHHHHHHHHHH--CCT-TCEEEEESSCCTHHHHHHTTTTCCEEEE
T ss_pred             ccCCCcc-------------------ceEEEcCCchHHHHHHHHHH--hCC-CCEEEEcCCcCccHHHHHHHhcCCeEEE
Confidence            2234441                   00267999999999998765  457 89999999999999998888 6653   


Q ss_pred             --------------------------------------------------hhhhhh------------------------
Q psy16707        299 --------------------------------------------------KILIRA------------------------  304 (420)
Q Consensus       299 --------------------------------------------------~~~~r~------------------------  304 (420)
                                                                        ..+++.                        
T Consensus       165 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~  244 (430)
T 2x5f_A          165 YPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV  244 (430)
T ss_dssp             ECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS
T ss_pred             EeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc
Confidence                                                              000000                        


Q ss_pred             --------------------------------------------------------------ccCCCchHHHHHHHHHhC
Q psy16707        305 --------------------------------------------------------------FYSSPPIHGARIVQEILG  322 (420)
Q Consensus       305 --------------------------------------------------------------~~s~pp~~ga~iv~~IL~  322 (420)
                                                                                    .+.++|..++.++...|.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~  324 (430)
T 2x5f_A          245 YTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK  324 (430)
T ss_dssp             CCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred             cchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence                                                                          001112222222222232


Q ss_pred             -ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCCcccCCCCceEEecCC---CH-HHHHHHHHhCCeEEe
Q psy16707        323 -DPKLKAQWLTEVKGMADRIISMRQSLKDNLQ----KEGSNKPWNHITDQIGMFCYTGL---NA-TQVEKLIKEHSVYLT  393 (420)
Q Consensus       323 -dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~----~~g~~~~w~~i~~q~GmF~~~~l---~~-~~v~~Ll~e~~Vy~~  393 (420)
                       +    .+|.++++.++++++++|+.+.+.|+    +.|    |..+.++.|+|.|+.+   +. +++++|++++||++.
T Consensus       325 ~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~  396 (430)
T 2x5f_A          325 NN----KQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH----WQAYDFNSGYFMAIKVHDVDPEALRKHLIDKYSIGVI  396 (430)
T ss_dssp             SC----HHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT----EEECCCCBSSEEEEEESSSCHHHHHHHHHHHHCEECE
T ss_pred             cC----hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC----ceeeCCCceEEEEeCCCCCCHHHHHHHHHHhCCEEEe
Confidence             2    24777777799999999999999998    444    6777788899998644   44 456788776999999


Q ss_pred             CCC----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        394 KDG----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       394 p~g----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |++    |||++..++++++++.++|.+++
T Consensus       397 ~g~~~~iRis~~~~~~e~i~~~~~~l~~~l  426 (430)
T 2x5f_A          397 ALNATDIRIAFSCVEKDDIPHVFDSIAKAI  426 (430)
T ss_dssp             ECSSSEEEEEGGGSCGGGHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence            863    99999778889999999998875

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.59  E-value=1.1e-14  Score=143.17  Aligned_cols=218  Identities=14%  Similarity=0.111  Sum_probs=159.0

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +.+.|||+.|.   +  ..++++.|.+|......+ ..+.|.+ .| +++|+++++++....+..+.+++|         
T Consensus        22 g~~~idl~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i---------   84 (377)
T 3fdb_A           22 GQGVLPLWVAE---S--DFSTCPAVLQAITDAVQR-EAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWI---------   84 (377)
T ss_dssp             CTTSEECCSSC---C--CSCCCHHHHHHHHHHHHT-TCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGE---------
T ss_pred             CCCeeeecccC---C--CCCCCHHHHHHHHHHHHc-CCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHE---------
Confidence            56889999995   3  345778888887776653 4678999 88 999999999984322222334555         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|||+|+.+++..+  +.| ||+|++++|+|+.|...++..|++                    
T Consensus        85 -------------~~t~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~  148 (377)
T 3fdb_A           85 -------------FPIPDVVRGLYIAIDHF--TPA-QSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQ  148 (377)
T ss_dssp             -------------EEESCHHHHHHHHHHHH--SCT-TCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHH
T ss_pred             -------------EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhc
Confidence                         56999999999988755  457 899999999999999888877763                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       149 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  228 (377)
T 3fdb_A          149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIA  228 (377)
T ss_dssp             TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCG
T ss_pred             cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCc
Confidence                                                                                            


Q ss_pred             -----------h-------hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCC
Q psy16707        299 -----------K-------ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE--GSN  358 (420)
Q Consensus       299 -----------~-------~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~--g~~  358 (420)
                                 .       ........+++..++.++...|.+      ..+.++.++++++++|+.+.+.|++.  |  
T Consensus       229 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--  300 (377)
T 3fdb_A          229 GLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRY------GTDFLNQEVAYLKNNHDFLLHEIPKRIPG--  300 (377)
T ss_dssp             GGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHHHHHHHHHSTT--
T ss_pred             chhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHHhhCCC--
Confidence                       0       000111234455555554444432      12446677799999999999999985  4  


Q ss_pred             CCCcccCCCCceEEecC-----CCHHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        359 KPWNHITDQIGMFCYTG-----LNATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       359 ~~w~~i~~q~GmF~~~~-----l~~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                        |..+.++.|+|.|+.     .+.+.++.|++++||++.|+        +  |||++. +.++++...++|.++++
T Consensus       301 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~  374 (377)
T 3fdb_A          301 --AKITPMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVS  374 (377)
T ss_dssp             --CEECCCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             --ceEecCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHh
Confidence              777888899988763     34467789988999999874        2  999984 88888998888888763

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.59  E-value=4.3e-14  Score=142.22  Aligned_cols=247  Identities=12%  Similarity=0.056  Sum_probs=171.2

Q ss_pred             cccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHH
Q psy16707        131 PIRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDF  208 (420)
Q Consensus       131 p~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~f  208 (420)
                      |+.++++ ...+..+++..+.+.+.   .++.|||+.|.+   +  +..++.|.+|.....++.  ..+.|.+..|.+++
T Consensus        12 ~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~~~~---~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l   82 (429)
T 1yiz_A           12 KFDLPKR-YQGSTKSVWVEYIQLAA---QYKPLNLGQGFP---D--YHAPKYALNALAAAANSPDPLANQYTRGFGHPRL   82 (429)
T ss_dssp             CCCSSSS-CCCCTTCHHHHHHHHHH---HHCCEECCSSSC---S--SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHH
T ss_pred             ccchhHH-hhhCCchHHHHHHHHhc---cCCEEEecCCCC---C--CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHH
Confidence            4556665 66666665555544443   246899999972   2  335678888877766431  24689998999999


Q ss_pred             HHHHHHHH---cCCCCccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCC
Q psy16707        209 GKLAAQLA---YGEDCPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPT  284 (420)
Q Consensus       209 r~a~~~~~---~g~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~  284 (420)
                      ++++++++   +|..   ++++ +|                      +.|.|||.|+.+++..+  +.| ||.|++++|+
T Consensus        83 ~~~la~~l~~~~g~~---~~~~~~v----------------------~~~~g~~~a~~~~~~~~--~~~-gd~Vl~~~p~  134 (429)
T 1yiz_A           83 VQALSKLYSQLVDRT---INPMTEV----------------------LVTVGAYEALYATIQGH--VDE-GDEVIIIEPF  134 (429)
T ss_dssp             HHHHHHHHHHHHTSC---CCTTTSE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESC
T ss_pred             HHHHHHHHHHHhCCC---CCCcCCE----------------------EEecChHHHHHHHHHHh--cCC-CCEEEEcCCC
Confidence            99999998   4543   2344 55                      56999999999998765  457 8999999999


Q ss_pred             CCCcHHHHhhcCc---------------------c---------------------------------------------
Q psy16707        285 WGNHIPICKHTGL---------------------E---------------------------------------------  298 (420)
Q Consensus       285 w~ny~~i~~~aG~---------------------~---------------------------------------------  298 (420)
                      |+.|...++..|+                     .                                             
T Consensus       135 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (429)
T 1yiz_A          135 FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW  214 (429)
T ss_dssp             CTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHc
Confidence            9999887775542                     1                                             


Q ss_pred             ------------------------------------------------------------hh---hhhhccCCCchHHHH
Q psy16707        299 ------------------------------------------------------------KI---LIRAFYSSPPIHGAR  315 (420)
Q Consensus       299 ------------------------------------------------------------~~---~~r~~~s~pp~~ga~  315 (420)
                                                                                  ..   ..+....+++...+.
T Consensus       215 ~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  294 (429)
T 1yiz_A          215 NVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQE  294 (429)
T ss_dssp             TCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHH
T ss_pred             CcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcccCCChHHHH
Confidence                                                                        11   111122344556666


Q ss_pred             HHHHHhCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------------
Q psy16707        316 IVQEILGDP--KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------------  377 (420)
Q Consensus       316 iv~~IL~dp--~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------------  377 (420)
                      ++...|.+.  .+ .+|.+.++.++++++++|+.+.+.|++.|    |..+.++.|+|.|+.++                
T Consensus       295 a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  369 (429)
T 1yiz_A          295 AIAVGFETELKRL-KSPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARK  369 (429)
T ss_dssp             HHHHHHHHHHTTT-TSTTSHHHHHHHHHHHHHHHHHHHHHHHT----CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCH
T ss_pred             HHHHHHhcccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEEcccccccccccccccCCC
Confidence            565555420  00 11234567777999999999999999886    66667778999986432                


Q ss_pred             H-HHHHHHHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        378 A-TQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       378 ~-~~v~~Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                      . +.+++|++++||++.|+             +  |||++ .++++|+++.++|.++++
T Consensus       370 ~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~  427 (429)
T 1yiz_A          370 DYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF-KKDENLQKAAEILRKWKG  427 (429)
T ss_dssp             HHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-SCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-CCHHHHHHHHHHHHHhcc
Confidence            2 44577878999999763             2  99998 488889999999988753

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.58  E-value=2.6e-14  Score=141.15  Aligned_cols=228  Identities=19%  Similarity=0.157  Sum_probs=160.1

Q ss_pred             hHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCC
Q psy16707        146 SSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGED  220 (420)
Q Consensus       146 ~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~  220 (420)
                      ++..+.+...+  .++.+.|||+.|.+   +  +..++.|++|......+...+.|.+..|.+++++++++++   +|.+
T Consensus         9 ~~~~~~~~~~~~~~~g~~~idl~~~~~---~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~   83 (376)
T 2dou_A            9 VFLVVDEAKRKARERGVGLIDLSIGST---D--LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVG   83 (376)
T ss_dssp             HHHHHHHHHHHHHHTTCCCEECSSCCC---C--CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             hHHHHHHHHHHhhccCCCEEeccCCCC---C--CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            34444444332  23567899999973   2  2356788888777664323578988789999999999988   3543


Q ss_pred             CccccCC-ceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-
Q psy16707        221 CPQLKDN-LISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-  298 (420)
Q Consensus       221 ~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-  298 (420)
                         ++++ .|                      +.|.|||+++.+++..+  +.| ||.|++++|+|+.|...++..|++ 
T Consensus        84 ---~~~~~~v----------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~  135 (376)
T 2dou_A           84 ---LDPRREA----------------------LALIGSQEGLAHLLLAL--TEP-EDLLLLPEVAYPSYFGAARVASLRT  135 (376)
T ss_dssp             ---CCTTTSE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSCCHHHHHHHHHTTCEE
T ss_pred             ---CCCCccE----------------------EEcCCcHHHHHHHHHHh--cCC-CCEEEECCCCcHhHHHHHHHcCCEE
Confidence               2233 45                      56999999999988765  457 899999999999999988877653 


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       136 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  215 (376)
T 2dou_A          136 FLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLAL  215 (376)
T ss_dssp             EEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGS
T ss_pred             EEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhc
Confidence                                                                                            


Q ss_pred             ------------------------------h-------hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------------K-------ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRI  341 (420)
Q Consensus       299 ------------------------------~-------~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~  341 (420)
                                                    .       ........+++..++.++...|.+.      .+.++.+++++
T Consensus       216 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~  289 (376)
T 2dou_A          216 PGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTP------KEVVRGYARVY  289 (376)
T ss_dssp             TTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC------HHHHHHHHHHH
T ss_pred             CCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHH
Confidence                                          0       1111122345666776666667541      23456667899


Q ss_pred             HHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCC
Q psy16707        342 ISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSK  406 (420)
Q Consensus       342 ~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~  406 (420)
                      +++|+.+.+.|++.     |....++.|+|.|+.++    . +.+++|+++ ||++.|+        +  |||++. +.+
T Consensus       290 ~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~  362 (376)
T 2dou_A          290 RERALGMAEALKGV-----LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLE  362 (376)
T ss_dssp             HHHHHHHHHHHTTT-----SEECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHH
T ss_pred             HHHHHHHHHHHHHh-----cCccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHH
Confidence            99999999999875     45566778999986443    3 455777655 9999874        2  999985 778


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      +++.+.++|.+++
T Consensus       363 ~i~~~l~~l~~~l  375 (376)
T 2dou_A          363 ELLEAAKRIREAL  375 (376)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHh
Confidence            8888888888765

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.58  E-value=1.5e-14  Score=146.04  Aligned_cols=239  Identities=15%  Similarity=0.107  Sum_probs=163.4

Q ss_pred             ChHHHHHHHHHccCCCCceeecccccccCC-CCCCchHHHHHHHHHH-H-cc-CCCCCCCCCCCCHHHHHHHHHHHcCCC
Q psy16707        145 PSSNLLTEAFKKDTNVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIV-L-NK-NLDKEYAPIIGAPDFGKLAAQLAYGED  220 (420)
Q Consensus       145 d~i~~l~~~~~~d~~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~-~-~~-~~~~~Y~p~~G~~~fr~a~~~~~~g~~  220 (420)
                      +.++......++.  ..+|||++|.   ++ ..+++++.|+++.... . .. ...+.|.+..|.++||+++++++ +  
T Consensus        19 ~~~~~~~~~l~~~--~~~i~l~~g~---~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~-~--   90 (422)
T 3d6k_A           19 EEVTAKYAELKAK--NLSLDLTRGK---PSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL-G--   90 (422)
T ss_dssp             HHHHHHHHHHHHT--TCCEECCCCS---CCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH-T--
T ss_pred             HHHHHHHHHHhcc--CCeEeCCCCC---CChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh-C--
Confidence            3455555555442  3589999997   32 0134555566654322 1 11 13568999999999999999988 3  


Q ss_pred             CccccCCceeeecccCCCCccccccccccceeecccchHHH--HHHHHHHHhc-CCC--------CCEEEEcCCCCCCcH
Q psy16707        221 CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSL--RVGAAFLKNF-FPG--------EKVIYVPTPTWGNHI  289 (420)
Q Consensus       221 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal--~~~~~~l~~~-~p~--------gd~VlvpdP~w~ny~  289 (420)
                         +++++|                      +.|.|++.++  .+++..+..- .++        +|+|++++|+|+.|.
T Consensus        91 ---~~~~~i----------------------~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~  145 (422)
T 3d6k_A           91 ---LPADLV----------------------VAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF  145 (422)
T ss_dssp             ---CCGGGE----------------------EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH
T ss_pred             ---CChhHE----------------------EEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH
Confidence               234555                      5699999987  5665555321 011        358999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      ..++.+|++                                                                       
T Consensus       146 ~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~  225 (422)
T 3d6k_A          146 TITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALH  225 (422)
T ss_dssp             HHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTC
T ss_pred             HHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcccc
Confidence            999888774                                                                       


Q ss_pred             ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                            ....+....+++..++.++...|++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~  305 (422)
T 3d6k_A          226 TLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDV  305 (422)
T ss_dssp             BSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSH
T ss_pred             ccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCc
Confidence                                                                  01112222345777777777778763


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC-----
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD-----  395 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~-----  395 (420)
                         +.|.++++.++++|+++|+.+.+.|++. ..-+.|....++.|+|.|+.++   .+++..+++++||++.|+     
T Consensus       306 ---~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gV~v~~~g~~f~  382 (422)
T 3d6k_A          306 ---AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFP  382 (422)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHHHHHHTTEECCCTTTTSG
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCHHHHHHHHHHCCeEEEcCccccC
Confidence               4567778888899999999998888752 1001145556788999997553   566766778999999882     


Q ss_pred             -------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 -------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                             +  |||++..+.++++++.++|.+++
T Consensus       383 ~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l  415 (422)
T 3d6k_A          383 LHNDPNNENIRLAPSLPPVAELEVAMDGFATCV  415 (422)
T ss_dssp             GGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHH
Confidence                   1  99998778889999999888765

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.58  E-value=4.1e-15  Score=150.38  Aligned_cols=254  Identities=12%  Similarity=0.050  Sum_probs=167.3

Q ss_pred             cchhhhccccCCChHHHHHHHHH-ccCCCCce-eecccccccCCCCCCchHHHHHHHHHHHcc-------CC----CCCC
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFK-KDTNVNKI-NLGVGAYRDDQGKPYVLPSVKQADEIVLNK-------NL----DKEY  199 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~-~d~~~~kI-nL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-------~~----~~~Y  199 (420)
                      .+|+.-..-.+++++..+...+. ....+++| ||+.|.   |+..+++.+.++++...+..+       ..    ...|
T Consensus         3 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y   79 (444)
T 3if2_A            3 KFSKFGQKFTQPTGISQLMDDLGDALKSDQPVNMLGGGN---PAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANY   79 (444)
T ss_dssp             CCCHHHHHHHSCCHHHHHHHHHHHHHHSSSCCEECSCCC---CCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSC
T ss_pred             CcchhhhhccCchhHHHHHHHHHhhhcCchhhhccCCCC---CCcccchHHHHHHHHHHHHhccccccccchhhhhhhcc
Confidence            34444223345677777655443 23458999 999996   555344557777777766532       11    2579


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC---
Q psy16707        200 APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK---  276 (420)
Q Consensus       200 ~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd---  276 (420)
                      .+..|.++||+++++++....+..+.+++|                      +.|.|||+|+.+++..+  +.| ||   
T Consensus        80 ~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i----------------------~~t~G~t~al~~~~~~l--~~~-gd~~~  134 (444)
T 3if2_A           80 SNPQGDSAFIDALVGFFNRHYDWNLTSENI----------------------ALTNGSQNAFFYLFNLF--GGA-FVNEH  134 (444)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHCCCCCGGGE----------------------EEESSHHHHHHHHHHHS--SEE-EECC-
T ss_pred             CCCCCCHHHHHHHHHHHHhhcCCCCCHHHE----------------------EEecCcHHHHHHHHHHH--hCC-Ccccc
Confidence            999999999999999983221112345555                      66999999999998755  346 77   


Q ss_pred             -----------EEEEc-CCCCCCcHHHH------hhcC------------------c------------c----------
Q psy16707        277 -----------VIYVP-TPTWGNHIPIC------KHTG------------------L------------E----------  298 (420)
Q Consensus       277 -----------~Vlvp-dP~w~ny~~i~------~~aG------------------~------------~----------  298 (420)
                                 .|+++ +|+|+.|...+      ...|                  .            .          
T Consensus       135 ~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~  214 (444)
T 3if2_A          135 SQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSR  214 (444)
T ss_dssp             ------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEES
T ss_pred             ccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCC
Confidence                       78887 99999886421      1000                  0            0          


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       215 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~  294 (444)
T 3if2_A          215 PTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVI  294 (444)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHH
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHH
Confidence                                                                                            


Q ss_pred             ---hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec
Q psy16707        299 ---KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT  374 (420)
Q Consensus       299 ---~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~-m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~  374 (420)
                         ....+....+++..++.++...|.+.    +|.++++. ++++++++|+.+.+.|++.-....|....++.|+|.|+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~  370 (444)
T 3if2_A          295 EAVSAMNAVVNLAPTRFGAAIATPLVAND----RIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWL  370 (444)
T ss_dssp             HHHHHHHHHHHSSCCCHHHHHHHHHHHTS----HHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEE
T ss_pred             HHHHHHHHhccCCCChHHHHHHHHHHHcC----chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEE
Confidence               11112233445667777777767653    44455554 77889999999998887631111256667788999986


Q ss_pred             -----CCCHHHHHHHHHhCCeEEeCC------------------CcEEEcccCCCCHHHHHHHHHHHh
Q psy16707        375 -----GLNATQVEKLIKEHSVYLTKD------------------GRISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       375 -----~l~~~~v~~Ll~e~~Vy~~p~------------------gRis~agl~~~ni~~la~AI~~vv  419 (420)
                           +.+.+.+...++++||++.|+                  -|||++. +.++|++..++|.+++
T Consensus       371 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~  437 (444)
T 3if2_A          371 WFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVV  437 (444)
T ss_dssp             EETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHH
Confidence                 345555544447899999863                  1999997 8889999998888775

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.57  E-value=1.4e-13  Score=133.19  Aligned_cols=208  Identities=13%  Similarity=0.160  Sum_probs=150.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ..+.|+|+.+.    +. .++++.|++|......  ..+.| |..|.++||+++++++ |.     +++.|         
T Consensus        15 ~~~~i~l~~n~----~~-~~~~~~v~~a~~~~~~--~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~i---------   71 (337)
T 3p1t_A           15 AAQAVCLAFNE----NP-EAVEPRVQAAIAAAAA--RINRY-PFDAEPRVMRKLAEHF-SC-----PEDNL---------   71 (337)
T ss_dssp             CCCCEECSSCC----CC-SCCCHHHHHHHHHHGG--GTTSC-CTTHHHHHHHHHHHHH-TS-----CGGGE---------
T ss_pred             CCCceEeeCCC----CC-CCCCHHHHHHHHHhhh--hhccC-CCCchHHHHHHHHHHh-Cc-----CHHHE---------
Confidence            34679999885    22 3467888888877654  35778 5679999999999986 42     23444         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|+|+++.+++..+    | ||+|++++|+|+.|...++..|++                    
T Consensus        72 -------------~~t~G~~~~l~~~~~~~----~-gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  133 (337)
T 3p1t_A           72 -------------MLVRGIDECFDRISAEF----S-SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV  133 (337)
T ss_dssp             -------------EEESHHHHHHHHHHHHS----T-TSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC
T ss_pred             -------------EEeCCHHHHHHHHHHhc----C-CCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh
Confidence                         56999999999988643    7 899999999999999999988875                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       134 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~  213 (337)
T 3p1t_A          134 SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP  213 (337)
T ss_dssp             CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECC
T ss_pred             cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCcEEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeC
Confidence                                                                                            


Q ss_pred             ----hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe
Q psy16707        299 ----KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY  373 (420)
Q Consensus       299 ----~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~  373 (420)
                          ..+.+ ....+++..++.++...|.+.   ..|.    ...+++.++|+.+.+.|+++|    |...+++.++|.+
T Consensus       214 ~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~---~~~~----~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~  282 (337)
T 3p1t_A          214 SELIAAMKRKQWFCNVGTLDLHALEAALDND---RARE----AHIAKTLAQRRRVADALRGLG----YRVASSEANFVLV  282 (337)
T ss_dssp             HHHHHHHHTTSCTTCSCHHHHHHHHHHHTCH---HHHH----HHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSEEEE
T ss_pred             HHHHHHHHhhcCCCCCCHHHHHHHHHHhCCH---HHHH----HHHHHHHHHHHHHHHHHHHCc----CEECCCCCeEEEE
Confidence                11111 123456677777777777653   2232    333556777889999999887    6656666555555


Q ss_pred             cCCCHHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        374 TGLNATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       374 ~~l~~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                      ...+.+++..+++++||++.|+.        |||++  +.++++++.+++.++.+
T Consensus       283 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~~  335 (337)
T 3p1t_A          283 ENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYSD  335 (337)
T ss_dssp             ECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred             EcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhh
Confidence            44455666666789999998852        99987  57899999999998753

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.57  E-value=1.2e-13  Score=137.71  Aligned_cols=241  Identities=13%  Similarity=0.208  Sum_probs=167.9

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a  211 (420)
                      ++++ ...+...++..+.+..+   +++.|||+.|.   ++....+.+.|.+|.....++.  ....|.+..|.++++++
T Consensus        10 ~~~~-~~~~~~~~~~~~~~~~~---~~~~i~l~~g~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~   82 (397)
T 2zyj_A           10 FGKG-AGRIQASTIRELLKLTQ---RPGILSFAGGL---PAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAF   82 (397)
T ss_dssp             SCGG-GGGCCCCHHHHHHHHHT---STTCEEESSCC---CCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH
T ss_pred             hhhh-hcccCchHHHHHHhhcc---CCCceecCCCC---CCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH
Confidence            4555 55666666666655442   45789999997   2222345677877776655421  23689988999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++ |.     +++.|                      +.|.||++++.+++..+  +.| ||.|++++|+|+.|...
T Consensus        83 la~~~-g~-----~~~~v----------------------~~~~g~~~al~~~~~~~--~~~-gd~Vl~~~p~y~~~~~~  131 (397)
T 2zyj_A           83 VAEWI-GV-----RPEEV----------------------LITTGSQQALDLVGKVF--LDE-GSPVLLEAPSYMGAIQA  131 (397)
T ss_dssp             HHHHH-TS-----CGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred             HHHHh-CC-----ChhhE----------------------EEeccHHHHHHHHHHHh--CCC-CCEEEEeCCCcHHHHHH
Confidence            99988 42     24445                      56999999999988755  457 89999999999999988


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       132 ~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~  211 (397)
T 2zyj_A          132 FRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG  211 (397)
T ss_dssp             HHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS
T ss_pred             HHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC
Confidence            8877764                                                                         


Q ss_pred             -----------hh------h-h------------------------------hhccCCCchHHHHHHHHHhCChhhHHHH
Q psy16707        299 -----------KI------L-I------------------------------RAFYSSPPIHGARIVQEILGDPKLKAQW  330 (420)
Q Consensus       299 -----------~~------~-~------------------------------r~~~s~pp~~ga~iv~~IL~dp~L~~~w  330 (420)
                                 ..      + +                              .....+++..++.++...|.+    ..|
T Consensus       212 g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~----~~~  287 (397)
T 2zyj_A          212 EARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKE----GFS  287 (397)
T ss_dssp             SCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT----THH
T ss_pred             CCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh----CCH
Confidence                       00      0 0                              011112344555555555654    245


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCC----------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKD----------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~----------  395 (420)
                       +.++.++++++++|+.+.+.|++.- |+.+....++.|+|.|+.+    +. +.+++|+ ++||++.|+          
T Consensus       288 -~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~  364 (397)
T 2zyj_A          288 -ERLERVRRVYREKAQAMLHALDREV-PKEVRYTRPKGGMFVWMELPKGLSAEGLFRRAL-EENVAFVPGGPFFANGGGE  364 (397)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHS-CTTSEECCCSBSSEEEEECSTTCCHHHHHHHHH-HTTEEEEESGGGCTTSCCT
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEccCCccEEEEEEcCCCCCHHHHHHHHH-HCCCEEechHHhcCCCCCC
Confidence             6677888999999999999998751 1115656677899998644    34 4456775 559999863          


Q ss_pred             C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +  |||++..+.++++.+.++|.+++
T Consensus       365 ~~iRis~~~~~~~~i~~~~~~l~~~l  390 (397)
T 2zyj_A          365 NTLRLSYATLDREGIAEGVRRLGRAL  390 (397)
T ss_dssp             TEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             CeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            2  99999777888999988888765

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.55  E-value=1.1e-14  Score=146.20  Aligned_cols=227  Identities=16%  Similarity=0.093  Sum_probs=154.8

Q ss_pred             CCceeecccccccCCC-CCCchHHHHHHHH--HHHcc-CCCCCC-CCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707        160 VNKINLGVGAYRDDQG-KPYVLPSVKQADE--IVLNK-NLDKEY-APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg-~~~~~~~V~~a~~--~~~~~-~~~~~Y-~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~  234 (420)
                      .++|||+.|.   ++. .+++++.|++|..  .+..+ ...+.| .+..|.++||+++++++ +.     +++.|     
T Consensus        25 ~~~i~l~~g~---p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~-~~-----~~~~i-----   90 (423)
T 3ez1_A           25 GLNLNMQRGQ---PADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL-DV-----KAENV-----   90 (423)
T ss_dssp             TCCEESCCCC---CCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT-TS-----CGGGE-----
T ss_pred             CceEecCCCC---CChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh-CC-----ChhhE-----
Confidence            4789999997   331 1345556666653  33322 134789 99999999999999987 32     34445     


Q ss_pred             cCCCCccccccccccceeecccchHHHH--HHHHHHHhcCCC--------CCEEEEcCCCCCCcHHHHhhcCcc------
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLR--VGAAFLKNFFPG--------EKVIYVPTPTWGNHIPICKHTGLE------  298 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~--~~~~~l~~~~p~--------gd~VlvpdP~w~ny~~i~~~aG~~------  298 (420)
                                       +.|.||++++.  +++..+....|+        ||+|++++|+|+.|...++.+|++      
T Consensus        91 -----------------~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~  153 (423)
T 3ez1_A           91 -----------------LVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDM  153 (423)
T ss_dssp             -----------------EECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEE
T ss_pred             -----------------EEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccC
Confidence                             66999999997  666544321152        499999999999999998888764      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       154 ~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~  233 (423)
T 3ez1_A          154 QSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFV  233 (423)
T ss_dssp             ETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHH
T ss_pred             CCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchh
Confidence                                                                                            


Q ss_pred             -----------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q psy16707        299 -----------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGM  337 (420)
Q Consensus       299 -----------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m  337 (420)
                                                               ....+....+++..++.++...|.+  +...|.+.++.+
T Consensus       234 ~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~  311 (423)
T 3ez1_A          234 VLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE--YPGGLEGLMRDH  311 (423)
T ss_dssp             HHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH--STTHHHHHHHHH
T ss_pred             hhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh--ccchHHHHHHHH
Confidence                                                     0001222334556666666665543  113445667777


Q ss_pred             HHHHHHHHHHHHHHHHh-cCCCC-CCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeC-C-----------C--cE
Q psy16707        338 ADRIISMRQSLKDNLQK-EGSNK-PWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTK-D-----------G--RI  398 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~-~g~~~-~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p-~-----------g--Ri  398 (420)
                      ++.++++|+.+.+.|.+ +..-+ .+....++.|+|.|+.+   +.+++..+++++||++.| +           +  ||
T Consensus       312 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRi  391 (423)
T 3ez1_A          312 AAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRL  391 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEE
Confidence            77888888877777755 11101 14445678899998754   467777777899999998 2           1  99


Q ss_pred             EEcccCCCCHHHHHHHHHHHh
Q psy16707        399 SMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~agl~~~ni~~la~AI~~vv  419 (420)
                      |++..+.+++++..++|.+++
T Consensus       392 s~~~~~~~~i~~~~~~l~~~l  412 (423)
T 3ez1_A          392 APTRPPVEEVRTAMQVVAACI  412 (423)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHH
T ss_pred             EcCCCCHHHHHHHHHHHHHHH
Confidence            998778999999999988875

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.54  E-value=3.7e-14  Score=142.97  Aligned_cols=124  Identities=39%  Similarity=0.697  Sum_probs=117.2

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ..+++...|..|++||.+++.+++.+|.++.|+.+|.++++.|+++++..|+.|.+.|++.+.++.|..+..+.|||+++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~  374 (420)
T 4f4e_A          295 LSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYS  374 (420)
T ss_dssp             HHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEEC
T ss_pred             HHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEe
Confidence            45677778899999999999999999999999999999999999999999999999999988777799999999999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +++.+++..+.++++||+.+.||||++++++.+|++++++|.++
T Consensus       375 ~~~~~~~~~~l~~~gI~v~~~~Ris~~~~~~~~i~~~~~~l~~~  418 (420)
T 4f4e_A          375 GLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAAV  418 (420)
T ss_dssp             CCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCEEecCCCeEEEecCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999876

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.54  E-value=1.7e-14  Score=145.69  Aligned_cols=242  Identities=13%  Similarity=0.152  Sum_probs=165.5

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      +..+..+++..+.+..   ..++.|||+.|.   ++....+.+.|.+|.....++.  ....|.+..|.+++|+++++++
T Consensus        25 ~~~~~~~~~~~~~~~~---~~~~~idl~~g~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l   98 (425)
T 1vp4_A           25 GQNMKSSIIREILKFA---ADKDAISFGGGV---PDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLL   98 (425)
T ss_dssp             HHTCCCCCHHHHTTTT---TSTTCEECCCCS---CCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHH
T ss_pred             hhcCCCcHHHHHHHhc---cCCCceeCCCCC---CCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHH
Confidence            4556666665554332   356789999997   3322346777888777665431  1368999999999999999998


Q ss_pred             c---CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh
Q psy16707        217 Y---GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK  293 (420)
Q Consensus       217 ~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~  293 (420)
                      .   |..  .++++.|                      +.|.|||+++.+++..+  +.| ||.|++++|+|+.|...++
T Consensus        99 ~~~~g~~--~~~~~~v----------------------~~t~G~~~al~~~~~~l--~~~-gd~Vl~~~p~y~~~~~~~~  151 (425)
T 1vp4_A           99 ERMYGIT--GLDEDNL----------------------IFTVGSQQALDLIGKLF--LDD-ESYCVLDDPAYLGAINAFR  151 (425)
T ss_dssp             HHHHCCC--SCCGGGE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHHHH
T ss_pred             HhccCCC--CCCcccE----------------------EEeccHHHHHHHHHHHh--CCC-CCEEEEeCCCcHHHHHHHH
Confidence            3   421  0224444                      67999999999988755  457 8999999999998876655


Q ss_pred             hcCcc---------------------------------------------------------------------------
Q psy16707        294 HTGLE---------------------------------------------------------------------------  298 (420)
Q Consensus       294 ~aG~~---------------------------------------------------------------------------  298 (420)
                      ..|++                                                                           
T Consensus       152 ~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~  231 (425)
T 1vp4_A          152 QYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYG  231 (425)
T ss_dssp             TTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSST
T ss_pred             HcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            44321                                                                           


Q ss_pred             --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                        .........+++..++.++...|.+.    
T Consensus       232 ~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----  307 (425)
T 1vp4_A          232 ALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERY----  307 (425)
T ss_dssp             TCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHS----
T ss_pred             cccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcC----
Confidence                                                              00011111234556666666555321    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCC------
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNK--PWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~--~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~------  395 (420)
                      .|.+.++.++++++++|+.+.+.|++.. |+  .|....++.|+|.|+.++     .+.++.|+++ ||++.|+      
T Consensus       308 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~g~~f~~~  385 (425)
T 1vp4_A          308 DLLEQLKPTIELYRRKRTVMLNALEEYF-SDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRK-KVFYVPGRVFKVY  385 (425)
T ss_dssp             CHHHHTHHHHHHHHHHHHHHHHHHHHHS-TTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHH-TEECEEGGGGCTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHC-CCEEECchhhcCC
Confidence            3456677888999999999999998751 11  266666788999986443     2456777666 9999863      


Q ss_pred             ----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 ----G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                          +  |||++..++++++++.++|.+++
T Consensus       386 ~~~~~~iRis~~~~~~e~i~~~l~~l~~~l  415 (425)
T 1vp4_A          386 DEPSPSMRLSFCLPPDEKIVEGIKRLREVV  415 (425)
T ss_dssp             CCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence                2  99999777888999999888765

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.54  E-value=9.6e-14  Score=140.37  Aligned_cols=224  Identities=17%  Similarity=0.245  Sum_probs=159.2

Q ss_pred             cCCC-CceeecccccccCCCCCCchHHHHHHHHHHHccCC-----------CCCCCCCCCCHHHHHHHHHHHcC--CCCc
Q psy16707        157 DTNV-NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL-----------DKEYAPIIGAPDFGKLAAQLAYG--EDCP  222 (420)
Q Consensus       157 d~~~-~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~-----------~~~Y~p~~G~~~fr~a~~~~~~g--~~~~  222 (420)
                      +.++ ..|+|++..      ++...+.+.++.........           ...|.+..|.++|++++++++..  ....
T Consensus        34 ~~~p~~~i~lg~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~  107 (435)
T 3piu_A           34 VHNTNGIIQMGLAE------NQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKV  107 (435)
T ss_dssp             TTBTTSBEECSSCC------CCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSS
T ss_pred             ccCCCCeEEecccc------ccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCC
Confidence            3343 466888864      46678888888776432110           15699999999999999998841  1112


Q ss_pred             cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh-hcCcc---
Q psy16707        223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK-HTGLE---  298 (420)
Q Consensus       223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~-~aG~~---  298 (420)
                      .++++.|                      +.|.|||+|+..++..+  +.| ||.|++++|+|++|...+. .+|++   
T Consensus       108 ~~~~~~v----------------------~~~~gg~~a~~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~~g~~~~~  162 (435)
T 3piu_A          108 TFDPNHL----------------------VLTAGATSANETFIFCL--ADP-GEAVLIPTPYYPGFDRDLKWRTGVEIVP  162 (435)
T ss_dssp             CCCGGGE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHTTTTTCCEEEE
T ss_pred             CCCHHHE----------------------EEcCChHHHHHHHHHHh--cCC-CCeEEECCCccccHHHHHHHhcCCEEEE
Confidence            2334444                      67999999999998765  447 8999999999999988776 55543   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       163 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~  242 (435)
T 3piu_A          163 IHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS  242 (435)
T ss_dssp             EECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSC
T ss_pred             eeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence                                                                                            


Q ss_pred             --------hh-------------h-h------------------------------hhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 --------KI-------------L-I------------------------------RAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 --------~~-------------~-~------------------------------r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                              ..             + +                              ...+.+++...+.+++.+|.+.  
T Consensus       243 ~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--  320 (435)
T 3piu_A          243 FISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDK--  320 (435)
T ss_dssp             CCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCH--
T ss_pred             CcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcCh--
Confidence                    00             0 1                              0111223344555555555543  


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCH-----------HHHHHHHHhCCeEEeC
Q psy16707        327 KAQW-LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----------TQVEKLIKEHSVYLTK  394 (420)
Q Consensus       327 ~~~w-~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~-----------~~v~~Ll~e~~Vy~~p  394 (420)
                        +| .+.++.++++++++|+.+.+.|++.|    |..+.++.|+|.|+.++.           +.+++|++++||++.|
T Consensus       321 --~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~  394 (435)
T 3piu_A          321 --KLTKNYIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP  394 (435)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEE
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeC
Confidence              34 34567778999999999999999887    777788888999975542           4568888888999987


Q ss_pred             C--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        395 D--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 ~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +        +  ||+++.++.++++++.++|.+++
T Consensus       395 g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l  429 (435)
T 3piu_A          395 GSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV  429 (435)
T ss_dssp             GGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence            3        1  99998778999999999998875

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.53  E-value=4.3e-14  Score=140.76  Aligned_cols=125  Identities=65%  Similarity=1.063  Sum_probs=118.6

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      +..+++.+.|..+++||..++.+++.+|++++++..|.++++.++++++..|..|.+.|++.+.++.|.++..+.|||.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~  354 (401)
T 7aat_A          275 VESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCF  354 (401)
T ss_dssp             HHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEE
T ss_pred             HHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEe
Confidence            44677788899999999999999999999999999999999999999999999999999999888889999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      .+++.++++.|.++++||+.+.+|||++++|+.+|++++++|.++
T Consensus       355 ~~~~~~~~~~ll~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~  399 (401)
T 7aat_A          355 TGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV  399 (401)
T ss_dssp             CCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHhCCEeccCCCeEEeccCChhhHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999876

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.53  E-value=3e-13  Score=135.36  Aligned_cols=240  Identities=15%  Similarity=0.186  Sum_probs=160.8

Q ss_pred             CChHHHHHHHHHccCC-CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC----
Q psy16707        144 VPSSNLLTEAFKKDTN-VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG----  218 (420)
Q Consensus       144 ~d~i~~l~~~~~~d~~-~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g----  218 (420)
                      .+++..+...+....+ .+.|||+.|.... .+..++++.|.+|......+...+.|.+..|.+++|+++++++..    
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~   94 (416)
T 1bw0_A           16 FNPIRTVSDNAKPSPSPKPIIKLSVGDPTL-DKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVH   94 (416)
T ss_dssp             CCHHHHHHHTCCCCCSCSCCEECCCCCTTT-TSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCC
T ss_pred             ccHHHHHHHHHHHhhcCCCeEEecCcCCCc-ccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcc
Confidence            4456666655533332 4689999996211 134577788888877766543357899999999999999998851    


Q ss_pred             --CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        219 --EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       219 --~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                        ..+..+++++|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...++..|
T Consensus        95 ~~~~~~~~~~~~v----------------------~~~~g~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g  149 (416)
T 1bw0_A           95 KEELKSTIVKDNV----------------------VLCSGGSHGILMAITAI--CDA-GDYALVPQPGFPHYETVCKAYG  149 (416)
T ss_dssp             STTTGGGCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHHHHHTT
T ss_pred             cccCCCCCCcceE----------------------EEeCChHHHHHHHHHHh--CCC-CCEEEEcCCCcHhHHHHHHHcC
Confidence              12222334444                      67999999999988765  457 8999999999999999888777


Q ss_pred             cc---------------------------------------------------------------------------h--
Q psy16707        297 LE---------------------------------------------------------------------------K--  299 (420)
Q Consensus       297 ~~---------------------------------------------------------------------------~--  299 (420)
                      ++                                                                           .  
T Consensus       150 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~  229 (416)
T 1bw0_A          150 IGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDP  229 (416)
T ss_dssp             CEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCT
T ss_pred             cEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence            64                                                                           0  


Q ss_pred             --hh--------------------------------------------h---hh---ccCCCchHHHHHHHHHhCChhhH
Q psy16707        300 --IL--------------------------------------------I---RA---FYSSPPIHGARIVQEILGDPKLK  327 (420)
Q Consensus       300 --~~--------------------------------------------~---r~---~~s~pp~~ga~iv~~IL~dp~L~  327 (420)
                        ..                                            .   +.   ...+++..++.++...|.+.  .
T Consensus       230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~  307 (416)
T 1bw0_A          230 NATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNT--P  307 (416)
T ss_dssp             TCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSS--C
T ss_pred             CCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcc--c
Confidence              00                                            0   00   00112222233222222210  0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCC---------CH-HHHHHHHHhCCeEEeCC-
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGL---------NA-TQVEKLIKEHSVYLTKD-  395 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l---------~~-~~v~~Ll~e~~Vy~~p~-  395 (420)
                         .+.++.++++++++|+.+.+.|+++ |    |..+.++.|+|.|+.+         +. +.+++|++++||++.|+ 
T Consensus       308 ---~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~  380 (416)
T 1bw0_A          308 ---QEHLDQIVAKIEESAMYLYNHIGECIG----LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGT  380 (416)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHTTSTT----EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGG
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHhCCC----CcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEeccc
Confidence               2345666789999999999999876 4    5656677899988533         33 44577878999999874 


Q ss_pred             -----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 -----G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                           +  |||++ .+.++++...++|.+++
T Consensus       381 ~f~~~~~iRis~~-~~~e~l~~~l~~l~~~l  410 (416)
T 1bw0_A          381 IFHAPGFTRLTTT-RPVEVYREAVERIKAFC  410 (416)
T ss_dssp             GGTCTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence                 2  99995 77888888888887765

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.50  E-value=2.3e-12  Score=126.49  Aligned_cols=221  Identities=13%  Similarity=0.084  Sum_probs=159.4

Q ss_pred             cCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCC
Q psy16707        142 VKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDC  221 (420)
Q Consensus       142 ~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~  221 (420)
                      ...+++..+...+   ...+.|||+.|.     ...++++.|.+|......  ....|.+..| +++|+++++++ |.  
T Consensus        15 ~~~~~~~~~~~~~---~~~~~i~l~~~~-----~~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~-~~--   80 (365)
T 3get_A           15 EPGKDIEVIAKEY---GVKEVIKLASNE-----NPFGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY-KV--   80 (365)
T ss_dssp             CCCCCHHHHHHHT---TCSCCEECSSCC-----CTTCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH-TC--
T ss_pred             CCCCCHHHHHHhc---CCCceEEecCCC-----CCCCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh-CC--
Confidence            3345555555544   236899999996     224577888888777664  3678988777 99999999986 42  


Q ss_pred             ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---
Q psy16707        222 PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---  298 (420)
Q Consensus       222 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---  298 (420)
                         +++.|                      +.|.|||.++.+++..+  +.| ||+|++++|+|+.|...++..|++   
T Consensus        81 ---~~~~v----------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~  132 (365)
T 3get_A           81 ---QNENI----------------------IIGAGSDQVIEFAIHSK--LNS-KNAFLQAGVTFAMYEIYAKQCGAKCYK  132 (365)
T ss_dssp             ---CGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEECSSCCTHHHHHHHHHTCEEEE
T ss_pred             ---CcceE----------------------EECCCHHHHHHHHHHHH--hCC-CCEEEEeCCChHHHHHHHHHcCCEEEE
Confidence               23444                      66999999999988755  457 999999999999999887766542   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       133 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  212 (365)
T 3get_A          133 TQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCEL  212 (365)
T ss_dssp             CSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHH
T ss_pred             EecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHH
Confidence                                                                                            


Q ss_pred             ----------------------------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q psy16707        299 ----------------------------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRII  342 (420)
Q Consensus       299 ----------------------------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~  342 (420)
                                                        ..+  .+..| +++..++.++...|.+.       +.++.++++++
T Consensus       213 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~  284 (365)
T 3get_A          213 IKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPF-NVSNLALKAAVAAMDDD-------EFTEKTLENNF  284 (365)
T ss_dssp             HHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCTT-CSCHHHHHHHHHHHTCH-------HHHHHHHHHHH
T ss_pred             hccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCCC-CcCHHHHHHHHHHhCCH-------HHHHHHHHHHH
Confidence                                              000  01122 35666666666666642       34566678999


Q ss_pred             HHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHH-HHHHHhCCeEEeCCC-------cEEEcccCCCCHHHH
Q psy16707        343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQV-EKLIKEHSVYLTKDG-------RISMAGVTSKNVGYL  411 (420)
Q Consensus       343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v-~~Ll~e~~Vy~~p~g-------Ris~agl~~~ni~~l  411 (420)
                      ++|+.+.+.|++.|    +.. .++.|.|.|+.+   +.+.+ +.| .++||++.|+.       |||++  +.++++++
T Consensus       285 ~~~~~l~~~l~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l  356 (365)
T 3get_A          285 SQMELYKEFAKKHN----IKI-IDSYTNFITYFFDEKNSTDLSEKL-LKKGIIIRNLKSYGLNAIRITIG--TSYENEKF  356 (365)
T ss_dssp             HHHHHHHHHHHHTT----CEE-CCCSSSEEEEECSSSCHHHHHHHH-HTTTEECEECGGGTCSEEEEECC--CHHHHHHH
T ss_pred             HHHHHHHHHHHhCC----CEE-CCCCCeEEEEECCCCCHHHHHHHH-HHCCEEEEECccCCCCEEEEEcC--CHHHHHHH
Confidence            99999999999986    443 456677888655   45554 555 57799999863       99987  77899999


Q ss_pred             HHHHHHHhC
Q psy16707        412 AKAIHAVTK  420 (420)
Q Consensus       412 a~AI~~vv~  420 (420)
                      .+++.++++
T Consensus       357 ~~~l~~~l~  365 (365)
T 3get_A          357 FTEFDKILR  365 (365)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999864

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.50  E-value=7e-13  Score=130.65  Aligned_cols=218  Identities=10%  Similarity=0.052  Sum_probs=155.1

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +.+.|||++|.   ++  .++++.|.+|......+ ..+.|.+  |..++++++++++....+..+++++|         
T Consensus        31 ~~~~i~l~~~~---~~--~~~~~~v~~a~~~~~~~-~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v---------   93 (391)
T 4dq6_A           31 TNDLLPMWVAD---MD--FKAAPCIIDSLKNRLEQ-EIYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWL---------   93 (391)
T ss_dssp             CSCSEECCSSS---CS--SCCCHHHHHHHHHHHTT-CCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGE---------
T ss_pred             CCCceeccccC---CC--CCCCHHHHHHHHHHHhC-CCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHe---------
Confidence            46899999995   33  46678888887776653 4567766  77999999999873221111234445         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|||.|+.+++..+  +.| ||+|++++|+|+.|...++..|++                    
T Consensus        94 -------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~  157 (391)
T 4dq6_A           94 -------------IYSPGVIPAISLLINEL--TKA-NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYED  157 (391)
T ss_dssp             -------------EEESCHHHHHHHHHHHH--SCT-TCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHH
T ss_pred             -------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHH
Confidence                         56999999999988755  457 899999999999999887765431                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       158 l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~s  237 (391)
T 4dq6_A          158 IENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPT  237 (391)
T ss_dssp             HHHHCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSH
T ss_pred             HHHHhhcCCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEech
Confidence                                                                                            


Q ss_pred             ----------------h-hhh------h--hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ----------------K-ILI------R--AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ  353 (420)
Q Consensus       299 ----------------~-~~~------r--~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~  353 (420)
                                      . .+.      +  ..+++++..++.++...|.+.   .+   .++.++++++++|+.+.+.|+
T Consensus       238 K~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~---~~~~~~~~~~~~~~~l~~~l~  311 (391)
T 4dq6_A          238 KTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ES---WLESFLEYLESNIDFAIKYIN  311 (391)
T ss_dssp             HHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HH---HHHHHHHHHHHHHHHHHHHHH
Confidence                            0 110      1  123355666666555544321   23   356667899999999999998


Q ss_pred             hc--CCCCCCcccCCCCceEEecC-----CCH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHH
Q psy16707        354 KE--GSNKPWNHITDQIGMFCYTG-----LNA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       354 ~~--g~~~~w~~i~~q~GmF~~~~-----l~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI  415 (420)
                      +.  |    |..+.++.|+|.|+.     .+. +.+++|++++||++.|+        +  ||+++ .+.++++++.++|
T Consensus       312 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l  386 (391)
T 4dq6_A          312 ENMPK----LKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRI  386 (391)
T ss_dssp             HHCTT----SEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHH
T ss_pred             hhCCC----CEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHH
Confidence            74  4    777888889998753     344 45577877779999874        2  99998 6888899999999


Q ss_pred             HHHhC
Q psy16707        416 HAVTK  420 (420)
Q Consensus       416 ~~vv~  420 (420)
                      .++++
T Consensus       387 ~~~l~  391 (391)
T 4dq6_A          387 KNAIN  391 (391)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            88764

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.49  E-value=6e-13  Score=129.84  Aligned_cols=211  Identities=15%  Similarity=0.163  Sum_probs=155.2

Q ss_pred             HHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeec
Q psy16707        154 FKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQ  233 (420)
Q Consensus       154 ~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~  233 (420)
                      |....+.+.|||+.|.     ...++++.|.+|......  ....| |..|.+++++++++++ |.     +++.|    
T Consensus        10 ~~~~~~~~~i~l~~~~-----~~~~~~~~v~~a~~~~~~--~~~~y-~~~~~~~l~~~la~~~-~~-----~~~~i----   71 (354)
T 3ly1_A           10 FTAPSTDNPIRINFNE-----NPLGMSPKAQAAARDAVV--KANRY-AKNEILMLGNKLAAHH-QV-----EAPSI----   71 (354)
T ss_dssp             CCCCCSSSCEECSSCC-----CSSCCCHHHHHHHHHTGG--GTTSC-CHHHHHHHHHHHHHHT-TS-----CGGGE----
T ss_pred             ccCCCCCceEEccCCC-----CCCCCCHHHHHHHHHHHh--hCcCC-CCCchHHHHHHHHHHh-CC-----ChHHE----
Confidence            3445567899999996     224577888888777654  35678 5668999999999976 42     23444    


Q ss_pred             ccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------
Q psy16707        234 GISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------  298 (420)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------  298 (420)
                                        +.|.|||+++.+++..+  +.| ||+|++++|+|++|...++..|++               
T Consensus        72 ------------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~  130 (354)
T 3ly1_A           72 ------------------LLTAGSSEGIRAAIEAY--ASL-EAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIE  130 (354)
T ss_dssp             ------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHH
T ss_pred             ------------------EEeCChHHHHHHHHHHH--hCC-CCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHH
Confidence                              56999999999998765  457 899999999999999998888764               


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       131 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  210 (354)
T 3ly1_A          131 GLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKT  210 (354)
T ss_dssp             HHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEE
T ss_pred             HHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEee
Confidence                                                                                            


Q ss_pred             ----------------------hhhh-hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy16707        299 ----------------------KILI-RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE  355 (420)
Q Consensus       299 ----------------------~~~~-r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~  355 (420)
                                            ..+. .....+++..++.++...|.+.       +.++.++++++++|+.+.+.|++.
T Consensus       211 ~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~  283 (354)
T 3ly1_A          211 FSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDS-------AFITYSKKSNDVSRQILLKALEDL  283 (354)
T ss_dssp             SSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHC
Confidence                                  0000 1112355677777777767642       345566689999999999999988


Q ss_pred             CCCCCCcccCCCCceEEecCC--CHHHH-HHHHHhCCeEEeCC------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        356 GSNKPWNHITDQIGMFCYTGL--NATQV-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       356 g~~~~w~~i~~q~GmF~~~~l--~~~~v-~~Ll~e~~Vy~~p~------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |    |..+ ++.|+|.|+.+  +.+++ +.| .++||++. +      +  |||++  +.++++++.++|.+++
T Consensus       284 ~----~~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l  349 (354)
T 3ly1_A          284 K----LPYL-PSEGNFVFHQLVVPLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFR  349 (354)
T ss_dssp             T----CCBC-CCCSSEEEEECSSCHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             C----CeEC-CCCceEEEEECCCCHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence            7    4444 56788888766  45555 555 57899988 2      2  99986  6788999999999875

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.49  E-value=4.4e-13  Score=134.14  Aligned_cols=245  Identities=14%  Similarity=0.151  Sum_probs=157.9

Q ss_pred             chhhhccccCCChHHHH--HHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLL--TEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l--~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      .+++ +..+..+.+..+  .....++ +.+.|||+.|..-. . .++.++.|.++......+ ....|.+..|.++++++
T Consensus        12 ~~~~-~~~~~~~~~~~~~~~~~~~~~-g~~~i~l~~~~~~~-~-~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~   86 (406)
T 1xi9_A           12 ASKR-ALSVEYAIRDVVLPARELEKK-GIKVIRLNIGDPVK-F-DFQPPEHMKEAYCKAIKE-GHNYYGDSEGLPELRKA   86 (406)
T ss_dssp             CCHH-HHTCCC-------CHHHHHHT-TCCCEECCCCCGGG-T-TCCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHH
T ss_pred             HHHH-HhcCChhHHHHHHHHHHHHHc-CCCEEEecCCCCCc-C-CCCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHH
Confidence            3444 555565544443  3344333 56789999997311 0 124567777777665543 34589999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+...++++|                      +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...
T Consensus        87 la~~l~~~~g~~~~~~~v----------------------~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~~~~~~~~~~  141 (406)
T 1xi9_A           87 IVEREKRKNGVDITPDDV----------------------RVTAAVTEALQLIFGAL--LDP-GDEILVPGPSYPPYTGL  141 (406)
T ss_dssp             HHHHHHHHHCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCHHHE----------------------EEcCChHHHHHHHHHHh--CCC-CCEEEEcCCCCccHHHH
Confidence            999983211111234444                      66999999999998765  457 89999999999999988


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|++                                                                         
T Consensus       142 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~  221 (406)
T 1xi9_A          142 VKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY  221 (406)
T ss_dssp             HHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS
T ss_pred             HHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc
Confidence            8877653                                                                         


Q ss_pred             ---------h--h---hh-hh---ccC------------CCc---------------------hHHHHHHHHHhCChhhH
Q psy16707        299 ---------K--I---LI-RA---FYS------------SPP---------------------IHGARIVQEILGDPKLK  327 (420)
Q Consensus       299 ---------~--~---~~-r~---~~s------------~pp---------------------~~ga~iv~~IL~dp~L~  327 (420)
                               .  .   +. .+   .++            .++                     ..++.++...|.     
T Consensus       222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~-----  296 (406)
T 1xi9_A          222 EGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLT-----  296 (406)
T ss_dssp             SSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHH-----
T ss_pred             CCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-----
Confidence                     0  0   00 00   000            111                     112222222221     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEec------CCCHH-HHHHHHHhCCeEEeCC----
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYT------GLNAT-QVEKLIKEHSVYLTKD----  395 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~------~l~~~-~v~~Ll~e~~Vy~~p~----  395 (420)
                      .. .+.++.++++++++|+.+.+.|+++ |    |..+.++.|+|.|+      +.+.+ .++.|++++||++.|+    
T Consensus       297 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~  371 (406)
T 1xi9_A          297 GP-MDYLKEYMKKLKERRDYIYKRLNEIPG----ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFG  371 (406)
T ss_dssp             SC-CHHHHHHHHHHHHHHHHHHHHHHTSTT----EECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGC
T ss_pred             CC-cHHHHHHHHHHHHHHHHHHHHHHhCCC----CeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcC
Confidence            00 1236777899999999999999986 3    66667778999874      23444 4577877999999864    


Q ss_pred             ----C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 ----G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                          +  |||++ .++++++.+.++|.+++
T Consensus       372 ~~~~~~lRis~~-~~~~~i~~~~~~l~~~l  400 (406)
T 1xi9_A          372 EYGAGHFRAVFL-PPIEILEEAMDRFEKFM  400 (406)
T ss_dssp             GGGTTBEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEec-CCHHHHHHHHHHHHHHH
Confidence                2  99998 88888888888888764

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.49  E-value=3.1e-12  Score=125.72  Aligned_cols=209  Identities=16%  Similarity=0.154  Sum_probs=153.2

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      +.+.|||+.|.   +  ..++++.|.+|......+.  ....|.+ .|.++|++++++++ |.     ++++|       
T Consensus        25 ~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~-g~-----~~~~i-------   85 (360)
T 3hdo_A           25 IASWIKLNTNE---N--PYPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELY-GF-----DPSWI-------   85 (360)
T ss_dssp             CTTSEECSSCC---C--SSCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHH-TC-----CGGGE-------
T ss_pred             ccceeeccCCC---C--CCCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHh-Cc-----CcceE-------
Confidence            35789999996   2  3567788888877766431  1467754 47799999999987 42     34445       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...++..|++                  
T Consensus        86 ---------------~~t~g~~~al~~~~~~l--~~~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~  147 (360)
T 3hdo_A           86 ---------------IMANGSDEVLNNLIRAF--AAE-GEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPER  147 (360)
T ss_dssp             ---------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSS
T ss_pred             ---------------EEcCCHHHHHHHHHHHH--hCC-CCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhh
Confidence                           56999999999998755  457 899999999999999998888764                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       148 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~  227 (360)
T 3hdo_A          148 YEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAI  227 (360)
T ss_dssp             BCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEE
T ss_pred             cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEe
Confidence                                                                                            


Q ss_pred             ------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCce
Q psy16707        299 ------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM  370 (420)
Q Consensus       299 ------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~Gm  370 (420)
                            ..+  .+.. .+++..++.++...|.+    .+|   ++.++++++++|+.+.+.|++.|    |.. .++.|.
T Consensus       228 ~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~-~~~~~~  294 (360)
T 3hdo_A          228 ARPEVIAALDKIRDH-YNLDRLAQAACVAALRD----QAY---LSECCRRIRETREWFTTELRSIG----YDV-IPSQGN  294 (360)
T ss_dssp             CCHHHHHHHHHHSCS-CCSCHHHHHHHHHHHHC----HHH---HHHHHHHHHHHHHHHHHHHHHTT----CEE-CCCSSS
T ss_pred             eCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----CEE-cCCCcc
Confidence                  111  1222 34566777777766654    233   55666899999999999999886    554 456677


Q ss_pred             EEecC---CCHHHHHHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        371 FCYTG---LNATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       371 F~~~~---l~~~~v~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |.|+.   .+.+.+...+.++||++.+++        |||++  +.++++++.++++++.
T Consensus       295 ~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~  352 (360)
T 3hdo_A          295 YLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIG  352 (360)
T ss_dssp             EEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence            77753   345555444568899998743        99987  7899999999999875

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.48  E-value=6.5e-13  Score=130.89  Aligned_cols=217  Identities=12%  Similarity=0.101  Sum_probs=155.5

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +.+.||+++|.   +  ..++++.|.+|......+ ..+.|.+.  ..++++++++++....+..++++.|         
T Consensus        26 g~~~i~~~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i---------   88 (391)
T 3dzz_A           26 KEKELPMWIAE---M--DFKIAPEIMASMEEKLKV-AAFGYESV--PAEYYKAVADWEEIEHRARPKEDWC---------   88 (391)
T ss_dssp             CTTCEECCSSC---C--SSCCCHHHHHHHHHHHTT-CCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGE---------
T ss_pred             CCCceeccccC---C--CCCCCHHHHHHHHHHHhc-CcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHE---------
Confidence            34799999995   4  346778888888776653 56788876  7999999999883221111334445         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.|||.|+.+++..+  +.| ||+|++++|+|+.|...++..|++                    
T Consensus        89 -------------~~~~g~~~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l  152 (391)
T 3dzz_A           89 -------------VFASGVVPAISAMVRQF--TSP-GDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADL  152 (391)
T ss_dssp             -------------EEESCHHHHHHHHHHHH--SCT-TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHH
T ss_pred             -------------EECCCHHHHHHHHHHHh--CCC-CCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHH
Confidence                         56999999999988765  457 999999999999999988877764                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       153 ~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~  232 (391)
T 3dzz_A          153 EEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISP  232 (391)
T ss_dssp             HHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECS
T ss_pred             HHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeC
Confidence                                                                                            


Q ss_pred             ----------------------hhhh----hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ----------------------KILI----RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL  352 (420)
Q Consensus       299 ----------------------~~~~----r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L  352 (420)
                                            ..+.    .....+++..++.++...|.+.   .   +.++.++++++++|+.+.+.|
T Consensus       233 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~~~~~~~~~~~~~~l~~~l  306 (391)
T 3dzz_A          233 SKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---H---DWLRELKQVLRDNFAYAREFL  306 (391)
T ss_dssp             HHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---H---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---H---HHHHHHHHHHHHHHHHHHHHH
Confidence                                  0000    1223345555555554444221   2   335666789999999999999


Q ss_pred             Hhc--CCCCCCcccCCCCceEEecC-----CCHH-HHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHH
Q psy16707        353 QKE--GSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKA  414 (420)
Q Consensus       353 ~~~--g~~~~w~~i~~q~GmF~~~~-----l~~~-~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~A  414 (420)
                      ++.  |    |....++.|+|.|+.     .+.+ .+++|++++||++.|+.          ||+++ .+.++++++.++
T Consensus       307 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~  381 (391)
T 3dzz_A          307 AKEVPE----VKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQR  381 (391)
T ss_dssp             HHHCTT----SEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHH
T ss_pred             HhhCCC----cEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHH
Confidence            984  4    677788889988753     3444 45777779999998751          99998 688889998888


Q ss_pred             HHHHh
Q psy16707        415 IHAVT  419 (420)
Q Consensus       415 I~~vv  419 (420)
                      |.+++
T Consensus       382 l~~~l  386 (391)
T 3dzz_A          382 LKQGV  386 (391)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88875

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.48  E-value=3.3e-13  Score=134.91  Aligned_cols=215  Identities=15%  Similarity=0.194  Sum_probs=150.1

Q ss_pred             cCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc----CCCCCCCCCCCCHHHHHHHHHHHc-CCCCccccCCceee
Q psy16707        157 DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----NLDKEYAPIIGAPDFGKLAAQLAY-GEDCPQLKDNLISI  231 (420)
Q Consensus       157 d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----~~~~~Y~p~~G~~~fr~a~~~~~~-g~~~~~~~~~~i~~  231 (420)
                      .++.+.|||+.|.   +  .++.++.|.+|......+    ...+.|.|..|.++||+++++++. |.    +++++|  
T Consensus        30 ~~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~----~~~~~v--   98 (400)
T 3asa_A           30 NPQHTVINLSIGD---T--TQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF----VDAKEI--   98 (400)
T ss_dssp             CTTSCCEECSSCC---C--CCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTS----SCGGGE--
T ss_pred             cCCCceEeccCCC---C--CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCC----CCHHHE--
Confidence            4567899999996   2  235667777776655432    135689999999999999999874 31    234555  


Q ss_pred             ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------
Q psy16707        232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------  298 (420)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------  298 (420)
                                          +.|.|++.++.+++.++   .| ||.|++++|+|+.|...++..|++             
T Consensus        99 --------------------~~~~G~~~al~~~~~~~---~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  154 (400)
T 3asa_A           99 --------------------FISDGAKVDLFRLLSFF---GP-NQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF  154 (400)
T ss_dssp             --------------------EEESCHHHHHHHHHHHH---CS-SCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTT
T ss_pred             --------------------EEccChHHHHHHHHHHc---CC-CCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCc
Confidence                                56999999999876543   47 899999999999999888766632             


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       155 ~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  234 (400)
T 3asa_A          155 FPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSF  234 (400)
T ss_dssp             CCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEEC
T ss_pred             ccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecc
Confidence                                                                                            


Q ss_pred             -----------------hhh-------h--------hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 -----------------KIL-------I--------RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQ  346 (420)
Q Consensus       299 -----------------~~~-------~--------r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~  346 (420)
                                       ..+       +        ...+++++..++.++..+|++     .   +++.++++++++|+
T Consensus       235 sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~---~~~~~~~~~~~~~~  306 (400)
T 3asa_A          235 SKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSI-----L---PQLEAIHYYRENSD  306 (400)
T ss_dssp             CGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-----T---TTCHHHHHHHHHHH
T ss_pred             hhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCc-----H---HHHHHHHHHHHHHH
Confidence                             111       1        011234555555555444432     1   35566789999999


Q ss_pred             HHHHHHHhcCCCCCCcccCCCCceEEecC-CC----H-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHH
Q psy16707        347 SLKDNLQKEGSNKPWNHITDQIGMFCYTG-LN----A-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGY  410 (420)
Q Consensus       347 ~l~~~L~~~g~~~~w~~i~~q~GmF~~~~-l~----~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~  410 (420)
                      .+.+.|++.|    +....++.|+|.|+. ++    . +.+++|++++||++.|+        +  |||++ .+.++++.
T Consensus       307 ~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~  381 (400)
T 3asa_A          307 LLRKALLATG----FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILA  381 (400)
T ss_dssp             HHHHHHHHTT----CEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHH
T ss_pred             HHHHHHHHCC----CeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHH
Confidence            9999999886    555556678999876 43    2 56688888899999874        2  88853 57778888


Q ss_pred             HHHHHHHHh
Q psy16707        411 LAKAIHAVT  419 (420)
Q Consensus       411 la~AI~~vv  419 (420)
                      ..++|.+++
T Consensus       382 ~l~~l~~~~  390 (400)
T 3asa_A          382 ACERLQMAP  390 (400)
T ss_dssp             HHHHHHC--
T ss_pred             HHHHHHHHH
Confidence            888887664

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.47  E-value=2.4e-13  Score=136.22  Aligned_cols=125  Identities=42%  Similarity=0.746  Sum_probs=118.0

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      +..+++.+.|..+++||..++.++...|.+++++.+|.++++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+
T Consensus       283 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~  362 (409)
T 4eu1_A          283 LVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAY  362 (409)
T ss_dssp             HHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEE
T ss_pred             HHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEE
Confidence            34567777889999999999999999999999999999999999999999999999999999888889999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      .+++.+.+++|.++++|++.+.|||+++++++.+|++++++|.++
T Consensus       363 ~~~~~~~~~~ll~~~gv~v~p~~Ri~~~~~~~~~i~~~~~~l~~~  407 (409)
T 4eu1_A          363 TGLTREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHNV  407 (409)
T ss_dssp             CCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             eCCCHHHHHHHHHcCCEEEcCCCEEEEEecCHhhHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999876

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.46  E-value=1.6e-12  Score=127.59  Aligned_cols=213  Identities=12%  Similarity=0.121  Sum_probs=154.9

Q ss_pred             cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        157 DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       157 d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      +...+.|||+.|.   +  ..++++.|.+|......+...+.|.+ .|.++|++++++++ |..    +++.|       
T Consensus        27 ~~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~-g~~----~~~~i-------   88 (367)
T 3euc_A           27 PDSHGLVKLDAME---N--PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM-QVP----AGMEV-------   88 (367)
T ss_dssp             CCCTTCEECCSSC---C--CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH-TCC----TTCEE-------
T ss_pred             CCCCCeeEccCCC---C--CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh-CCC----CcceE-------
Confidence            3456889999996   2  23466777777766554323578865 58999999999986 431    23444       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|||.++.+++..+  +.| ||+|++++|+|+.|...++..|++                  
T Consensus        89 ---------------~~~~g~t~a~~~~~~~~--~~~-gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~  150 (367)
T 3euc_A           89 ---------------LLGNGSDEIISMLALAA--ARP-GAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAML  150 (367)
T ss_dssp             ---------------EEEEHHHHHHHHHHHHT--CCT-TCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHH
T ss_pred             ---------------EEcCCHHHHHHHHHHHH--cCC-CCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHH
Confidence                           56999999999988754  457 899999999999999988888774                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       151 ~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  230 (367)
T 3euc_A          151 AAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGL  230 (367)
T ss_dssp             HHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTS
T ss_pred             HHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcc
Confidence                                                                                            


Q ss_pred             ---------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Q psy16707        299 ---------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKP  360 (420)
Q Consensus       299 ---------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~  360 (420)
                                     ..+  .+.. .+++..++.++...|.+    .+   .++.++++++++|+.+.+.|+++ |    
T Consensus       231 ~G~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~----~~---~~~~~~~~~~~~~~~l~~~l~~~~g----  298 (367)
T 3euc_A          231 AGIRLGYVAGDPQWLEQLDKVRPP-YNVNVLTEATALFALEH----VA---VLDEQAAQLRAERSRVAEGMAAHGG----  298 (367)
T ss_dssp             CSCCEEEEEECHHHHHHHGGGCCS-SCCCHHHHHHHHHHHTT----HH---HHHHHHHHHHHHHHHHHHHHHTSTT----
T ss_pred             cccCceeeeeCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcC----HH---HHHHHHHHHHHHHHHHHHHHHhCCC----
Confidence                           000  1112 23566677666666654    23   35566689999999999999987 4    


Q ss_pred             CcccCCCCceEEecCC-CHHHHHHHHHhCCeEEeCCC----------cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        361 WNHITDQIGMFCYTGL-NATQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       361 w~~i~~q~GmF~~~~l-~~~~v~~Ll~e~~Vy~~p~g----------Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                      |. +.++.|+|.|+.+ +.+.+...+.++||++.+++          |||++  +.++++++.++|+++++
T Consensus       299 ~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          299 VT-VFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             CE-ECCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred             cE-ECCCCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence            55 5567888988766 45555444578999998742          99987  78899999999999864

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.45  E-value=3.4e-12  Score=125.10  Aligned_cols=207  Identities=13%  Similarity=0.071  Sum_probs=147.5

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      ...+.|||+.|.   +  ..++++.|++|......  ....| |..|.+++++++++++ |.     +++.|        
T Consensus        30 ~~~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~--~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~v--------   87 (363)
T 3ffh_A           30 GLTKITKLSSNE---N--PLGTSKKVAAIQANSSV--ETEIY-PDGWASSLRKEVADFY-QL-----EEEEL--------   87 (363)
T ss_dssp             TCSCCEECSSCS---C--TTCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH-TC-----CGGGE--------
T ss_pred             CCCceEEccCCC---C--CCCCCHHHHHHHHHHHH--HhhcC-CCcchHHHHHHHHHHh-CC-----ChhhE--------
Confidence            346899999996   2  24567888888766432  34566 6679999999999987 32     23444        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                    +.|.|||+++.+++..+  +.| ||+|++++|+|+.|...++..|++                   
T Consensus        88 --------------~~~~g~t~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~  150 (363)
T 3ffh_A           88 --------------IFTAGVDELIELLTRVL--LDT-TTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLN  150 (363)
T ss_dssp             --------------EEESSHHHHHHHHHHHH--CST-TCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHH
T ss_pred             --------------EEeCCHHHHHHHHHHHH--ccC-CCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHH
Confidence                          56999999999988755  457 999999999999999999888775                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       151 ~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  230 (363)
T 3ffh_A          151 AIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLA  230 (363)
T ss_dssp             HCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCS
T ss_pred             hcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCc
Confidence                                                                                            


Q ss_pred             ----------hh------hhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCC
Q psy16707        299 ----------KI------LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQK-EGSNKPW  361 (420)
Q Consensus       299 ----------~~------~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~-~g~~~~w  361 (420)
                                ..      ..+.. .+++..++.++...|.+    .   +.++.++++++++|+.+.+.|++ .|    +
T Consensus       231 G~r~G~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~----~---~~~~~~~~~~~~~~~~l~~~l~~~~g----~  298 (363)
T 3ffh_A          231 SARVGYGIADKEIIRQLNIVRPP-FNTTSIGQKLAIEAIKD----Q---AFIGECRTSNANGIKQYEAFAKRFEK----V  298 (363)
T ss_dssp             SCCCEEEEECHHHHHHHHHTCCS-CCCBHHHHHHHHHHHHC----H---HHHHHHHHHHHHHHHHHHHHHHHCTT----C
T ss_pred             hhceeeeecCHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcC----H---HHHHHHHHHHHHHHHHHHHHHhhCCC----c
Confidence                      00      01122 24566667666665643    2   34556668999999999999998 66    5


Q ss_pred             cccCCCCceEEecCC--CHHHH-HHHHHhCCeEEeCCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        362 NHITDQIGMFCYTGL--NATQV-EKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       362 ~~i~~q~GmF~~~~l--~~~~v-~~Ll~e~~Vy~~p~g--------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      ..+ ++.|.|.|+.+  +.+.+ +.| .++||++.++.        ||+++  +.++++++.+++++++
T Consensus       299 ~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l  363 (363)
T 3ffh_A          299 KLY-PANGNFVLIDLGIEAGTIFSYL-EKNGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKLL  363 (363)
T ss_dssp             EEC-CCCSSEEEEECSSCHHHHHHHH-HHTTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred             eEC-CCCCeEEEEECCCCHHHHHHHH-HHCCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHhC
Confidence            544 55678888655  44444 555 57899998852        99987  7889999999998864

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.44  E-value=7.8e-13  Score=133.29  Aligned_cols=218  Identities=12%  Similarity=0.066  Sum_probs=157.1

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +.+.||+++|.   ++.  +++|.|.+|.....++ ..+.|.+..  .++++++++++....+..++++.|         
T Consensus        60 g~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~-~~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v---------  122 (421)
T 3l8a_A           60 NPELLQMWVAD---MDF--LPVPEIKEAIINYGRE-HIFGYNYFN--DDLYQAVIDWERKEHDYAVVKEDI---------  122 (421)
T ss_dssp             CTTCEECCSSC---CCS--CCCHHHHHHHHHHHHH-CCSSCBCCC--HHHHHHHHHHHHHHHCCCCCGGGE---------
T ss_pred             CCCeeecccCC---CCC--CCCHHHHHHHHHHHhc-CCcCCCCCC--HHHHHHHHHHHHHHhCCCCCHHHE---------
Confidence            56899999994   444  5777888777766543 567887653  899999999983322111234445         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------------  298 (420)
                                   +.|.||+.|+..++..+  ..| ||.|++++|+|+.|...++.+|.+                    
T Consensus       123 -------------~~~~g~~ea~~~a~~~~--~~~-gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l  186 (421)
T 3l8a_A          123 -------------LFIDGVVPAISIALQAF--SEK-GDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQL  186 (421)
T ss_dssp             -------------EEESCHHHHHHHHHHHH--SCT-EEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHH
T ss_pred             -------------EEcCCHHHHHHHHHHHh--cCC-CCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHH
Confidence                         56999999999998765  447 899999999999999888877654                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       187 e~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~  266 (421)
T 3l8a_A          187 EKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSA  266 (421)
T ss_dssp             HHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECS
T ss_pred             HHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeC
Confidence                                                                                            


Q ss_pred             ----------------------hhh----hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ----------------------KIL----IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL  352 (420)
Q Consensus       299 ----------------------~~~----~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L  352 (420)
                                            ..+    ....+++++..++.++...|.+   ..+|   ++.++++++++|+.|.+.|
T Consensus       267 sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~---~~~~---~~~~~~~~~~~~~~l~~~L  340 (421)
T 3l8a_A          267 TKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY---GKPW---LEELKTVIEGNIKLVIKEL  340 (421)
T ss_dssp             HHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH---CHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc---cHHH---HHHHHHHHHHHHHHHHHHH
Confidence                                  000    0223445666666655554531   1344   4555689999999999999


Q ss_pred             Hhc-CCCCCCcccCCCCceEEecCC-----C-HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHH
Q psy16707        353 QKE-GSNKPWNHITDQIGMFCYTGL-----N-ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       353 ~~~-g~~~~w~~i~~q~GmF~~~~l-----~-~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI  415 (420)
                      ++. +    +..+.++.+||.|+.+     + .+.++.|++++||++.|+        +  |||++ .+.++|++..++|
T Consensus       341 ~~~~~----i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l  415 (421)
T 3l8a_A          341 EAKTK----IKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRI  415 (421)
T ss_dssp             HHHCS----CEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHH
T ss_pred             HhCCC----ceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHH
Confidence            886 3    6777888888887643     3 356688888999999873        2  99998 6888999999999


Q ss_pred             HHHhC
Q psy16707        416 HAVTK  420 (420)
Q Consensus       416 ~~vv~  420 (420)
                      .++++
T Consensus       416 ~~~l~  420 (421)
T 3l8a_A          416 ISVFG  420 (421)
T ss_dssp             HHHC-
T ss_pred             HHHHh
Confidence            88763

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.41  E-value=8.1e-12  Score=124.02  Aligned_cols=213  Identities=12%  Similarity=0.073  Sum_probs=149.9

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~  236 (420)
                      .+.|||+.|.   +  ..++++.|.+|......+ ....|.+.  .++|++++++++   +|.+   +++++|       
T Consensus        31 ~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~la~~l~~~~g~~---~~~~~v-------   92 (399)
T 1c7n_A           31 NEVVPLSVAD---M--EFKNPPELIEGLKKYLDE-TVLGYTGP--TEEYKKTVKKWMKDRHQWD---IQTDWI-------   92 (399)
T ss_dssp             TTCCCCCSSS---C--SSCCCHHHHHHHHHHHHH-CCCSSBCC--CHHHHHHHHHHHHHHHCCC---CCGGGE-------
T ss_pred             CCceeeeecC---C--CCCCCHHHHHHHHHHHhc-CCCCCCCC--cHHHHHHHHHHHHHHhCCC---CChhhE-------
Confidence            4789999996   2  245677888887776543 45688764  999999999997   4532   234444       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|||+|+.+++..+  +.| ||.|++++|+|+.|...++..|++                  
T Consensus        93 ---------------~~t~g~~~a~~~~~~~l--~~~-gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~  154 (399)
T 1c7n_A           93 ---------------INTAGVVPAVFNAVREF--TKP-GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQ  154 (399)
T ss_dssp             ---------------EEESSHHHHHHHHHHHH--CCT-TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHH
T ss_pred             ---------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHH
Confidence                           67999999999998765  457 899999999999999888766543                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       155 ~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  234 (399)
T 1c7n_A          155 KLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFT  234 (399)
T ss_dssp             HHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEE
T ss_pred             HHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEE
Confidence                                                                                            


Q ss_pred             --------------------hhhh------hhc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 --------------------KILI------RAF--YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKD  350 (420)
Q Consensus       299 --------------------~~~~------r~~--~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~  350 (420)
                                          ..++      +..  +++++..++.++...|.+.      .+.++.++++++++|+.+.+
T Consensus       235 s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~  308 (399)
T 1c7n_A          235 APSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC------GKWLDGCIKVIDKNQRIVKD  308 (399)
T ss_dssp             CSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHH
T ss_pred             eChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHH
Confidence                                0010      111  2345666666555544311      23456667899999999999


Q ss_pred             HHHh-c-CCCCCCcccCCCCceEEecCC-----CHH-HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHH
Q psy16707        351 NLQK-E-GSNKPWNHITDQIGMFCYTGL-----NAT-QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLA  412 (420)
Q Consensus       351 ~L~~-~-g~~~~w~~i~~q~GmF~~~~l-----~~~-~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la  412 (420)
                      .|++ + |    |..+.++.|+|.|+.+     +.+ .++.|++++||++.|+        +  |||++.. .+++++..
T Consensus       309 ~L~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~-~~~l~~~l  383 (399)
T 1c7n_A          309 FFEVNHPE----IKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP-SSVIQESL  383 (399)
T ss_dssp             HHHHHCTT----SBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC-HHHHHHHH
T ss_pred             HHHhhCCC----CeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC-HHHHHHHH
Confidence            9987 4 4    6667778888887533     444 5577777899999874        2  9999854 66777777


Q ss_pred             HHHHHHh
Q psy16707        413 KAIHAVT  419 (420)
Q Consensus       413 ~AI~~vv  419 (420)
                      ++|.+++
T Consensus       384 ~~l~~~l  390 (399)
T 1c7n_A          384 ERLNKAL  390 (399)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777654

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.39  E-value=6.4e-12  Score=126.51  Aligned_cols=221  Identities=16%  Similarity=0.253  Sum_probs=151.9

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHc---------c-CCCCCCCCCCCCHHHHHHHHHHHc---CCCCccccC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN---------K-NLDKEYAPIIGAPDFGKLAAQLAY---GEDCPQLKD  226 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~---------~-~~~~~Y~p~~G~~~fr~a~~~~~~---g~~~~~~~~  226 (420)
                      ...|||+.+.      .+..++.|.++......         . .....|.+..|.++|++++++++-   |...+ +++
T Consensus        36 ~~~i~l~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~-~~~  108 (428)
T 1iay_A           36 NGVIQMGLAE------NQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVR-FDP  108 (428)
T ss_dssp             TSBEECSSCC------CCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSC-CCT
T ss_pred             Cceeeecccc------chhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCC-CCh
Confidence            3578888664      35556788877664211         0 013689988999999999999983   32211 234


Q ss_pred             CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh-hcCcc-------
Q psy16707        227 NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK-HTGLE-------  298 (420)
Q Consensus       227 ~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~-~aG~~-------  298 (420)
                      ++|                      +.|.|||+++.+++..+  +.| ||.|++++|+|+.|...+. ..|++       
T Consensus       109 ~~i----------------------~~~~G~~~ai~~~~~~~--~~~-gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~  163 (428)
T 1iay_A          109 ERV----------------------VMAGGATGANETIIFCL--ADP-GDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCE  163 (428)
T ss_dssp             TSC----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEESSCCTTHHHHTTTTTCCEEEEECCC
T ss_pred             hhE----------------------EEccChHHHHHHHHHHh--CCC-CCeEEEccCCCcchHHHHHHhcCCEEEEeecC
Confidence            445                      56999999999988755  457 8999999999999976442 33331       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       164 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~  243 (428)
T 1iay_A          164 SSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSI  243 (428)
T ss_dssp             TTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCH
T ss_pred             CccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCH
Confidence                                                                                            


Q ss_pred             -----h--------h--h-h-----------------------------h-hccCCCchHHHHHHHHHhCChhhHHHHHH
Q psy16707        299 -----K--------I--L-I-----------------------------R-AFYSSPPIHGARIVQEILGDPKLKAQWLT  332 (420)
Q Consensus       299 -----~--------~--~-~-----------------------------r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~  332 (420)
                           .        .  + +                             + ..+.+++..++.++..+|.+.++   +.+
T Consensus       244 ~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~  320 (428)
T 1iay_A          244 AEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKF---VDN  320 (428)
T ss_dssp             HHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHH---HHH
T ss_pred             HHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHH---HHH
Confidence                 0        0  0 0                             0 01123344555555555665321   223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----------H-HHHHHHHHhCCeEEeCC------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----------A-TQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----------~-~~v~~Ll~e~~Vy~~p~------  395 (420)
                      .++.++++++++|+.|.+.|+++|    |..+..+.|+|.|+.++          . +..++|++++||++.|+      
T Consensus       321 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~  396 (428)
T 1iay_A          321 FLRESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ  396 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCC
Confidence            566777999999999999999986    55566668999987553          2 34578877789999873      


Q ss_pred             --C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                        +  ||+++..+.++++++.++|.+++
T Consensus       397 ~~~~iRis~~~~~~e~i~~~~~~l~~~l  424 (428)
T 1iay_A          397 EPGWFRVCFANMDDGTVDIALARIRRFV  424 (428)
T ss_dssp             SSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence              2  99998788899999999998875

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.38  E-value=9.4e-12  Score=122.85  Aligned_cols=209  Identities=13%  Similarity=0.128  Sum_probs=147.8

Q ss_pred             ceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccC
Q psy16707        162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~  236 (420)
                      +|||+.|.+     ..++++.|.+|.....++  ...+.|.+..| +++++++++++   +|..   .+++.|       
T Consensus        32 ~idl~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~---~~~~~v-------   95 (369)
T 3cq5_A           32 DIRLNTNEN-----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVA---VTRDNL-------   95 (369)
T ss_dssp             SEECSSCCC-----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCC---CCGGGE-------
T ss_pred             ceeccCCCC-----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCC---CChHhE-------
Confidence            499999973     234566676666655432  12568877766 89999999997   3322   224444       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.||++++.+++..+  +.| ||.|++++|+|+.|...++..|++                  
T Consensus        96 ---------------~~~~G~~~al~~~~~~l--~~~-gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~  157 (369)
T 3cq5_A           96 ---------------WAANGSNEILQQLLQAF--GGP-GRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVAL  157 (369)
T ss_dssp             ---------------EEESHHHHHHHHHHHHH--CST-TCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHH
T ss_pred             ---------------EECCChHHHHHHHHHHh--cCC-CCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHH
Confidence                           56999999999888755  457 899999999999999888887764                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       158 ~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  237 (369)
T 3cq5_A          158 EEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAG  237 (369)
T ss_dssp             HHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGG
T ss_pred             HHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcc
Confidence                                                                                            


Q ss_pred             ---------h----hh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707        299 ---------K----IL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH  363 (420)
Q Consensus       299 ---------~----~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~  363 (420)
                               .    .+  .+..| +++..++.++...|.+    .   +.++.++++++++|+.+.+.|++.|    |..
T Consensus       238 ~r~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~----~---~~~~~~~~~~~~~~~~l~~~L~~~g----~~~  305 (369)
T 3cq5_A          238 GRLGYFVANPAFIDAVMLVRLPY-HLSALSQAAAIVALRH----S---ADTLGTVEKLSVERVRVAARLEELG----YAV  305 (369)
T ss_dssp             GCCEEEEECTHHHHHHHTTSCTT-CSCHHHHHHHHHHHHT----H---HHHHTHHHHHHHHHHHHHHHHHHHT----CEE
T ss_pred             cceEEEEeCHHHHHHHHHcCCCC-CCCHHHHHHHHHHhcC----H---HHHHHHHHHHHHHHHHHHHHHHhCC----CEE
Confidence                     0    00  01122 3555666656555543    1   3456677899999999999999876    554


Q ss_pred             cCCCCceEEecCC--CHHHH-HHHHHhCCeEEeCCC-----cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        364 ITDQIGMFCYTGL--NATQV-EKLIKEHSVYLTKDG-----RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       364 i~~q~GmF~~~~l--~~~~v-~~Ll~e~~Vy~~p~g-----Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                      . ++.|+|.|+.+  +.+.+ +.| .++||++.|+|     ||+++  ++++++++.+++.++++
T Consensus       306 ~-~~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~~~iRis~~--~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          306 V-PSESNFVFFGDFSDQHAAWQAF-LDRGVLIRDVGIAGHLRTTIG--VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             E-CCSSSEEEEECCSSHHHHHHHH-HHTTEECBCCSCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred             C-CCCCeEEEEECCCCHHHHHHHH-HHCCEEEEECCCCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence            4 56678887654  44444 555 68999999863     99987  67889999999998753

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.37  E-value=1.1e-11  Score=121.94  Aligned_cols=185  Identities=18%  Similarity=0.152  Sum_probs=136.0

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC
Q psy16707        195 LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG  274 (420)
Q Consensus       195 ~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~  274 (420)
                      ....|.+..|.++|++++++++.+.     .++.|                      +.|.|||.|+.+++..+  +.| 
T Consensus        55 ~~~~y~~~~g~~~l~~~la~~~~~~-----~~~~v----------------------~~~~g~~~a~~~~~~~l--~~~-  104 (375)
T 3op7_A           55 TKLNYGWIEGSPAFKKSVSQLYTGV-----KPEQI----------------------LQTNGATGANLLVLYSL--IEP-  104 (375)
T ss_dssp             SCCSSCCTTCCHHHHHHHHTTSSSC-----CGGGE----------------------EEESHHHHHHHHHHHHH--CCT-
T ss_pred             CCcCCCCCCChHHHHHHHHHHhccC-----ChhhE----------------------EEcCChHHHHHHHHHHh--cCC-
Confidence            5678999999999999999976322     23444                      66999999999998755  457 


Q ss_pred             CCEEEEcCCCCCCcHHHHhhcCcc--------------------------------------------------------
Q psy16707        275 EKVIYVPTPTWGNHIPICKHTGLE--------------------------------------------------------  298 (420)
Q Consensus       275 gd~VlvpdP~w~ny~~i~~~aG~~--------------------------------------------------------  298 (420)
                      ||+|++++|+|+.+...++..|++                                                        
T Consensus       105 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~  184 (375)
T 3op7_A          105 GDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIAS  184 (375)
T ss_dssp             TCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence            999999999999999998888764                                                        


Q ss_pred             ------------------------------------------------------------hhhhhhccCCCchHHHHHHH
Q psy16707        299 ------------------------------------------------------------KILIRAFYSSPPIHGARIVQ  318 (420)
Q Consensus       299 ------------------------------------------------------------~~~~r~~~s~pp~~ga~iv~  318 (420)
                                                                                  ....+....+++...+.++.
T Consensus       185 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  264 (375)
T 3op7_A          185 EVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQ  264 (375)
T ss_dssp             TTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHH
T ss_pred             HcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHH
Confidence                                                                        11112223344566666555


Q ss_pred             HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC----CC-HHHHHHHHHhCCeEEe
Q psy16707        319 EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG----LN-ATQVEKLIKEHSVYLT  393 (420)
Q Consensus       319 ~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~----l~-~~~v~~Ll~e~~Vy~~  393 (420)
                      ..|.      .+.+.++.++++++++++.+.+.|++.+.   +....++.|+|.|+.    .+ .+++++|++++||.+.
T Consensus       265 ~~l~------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~  335 (375)
T 3op7_A          265 LALA------HYQEILERNRHILEENLAILDQWIEEEPL---VSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLV  335 (375)
T ss_dssp             HHHH------THHHHHHHHHHHHHHHHHHHHHHHHHCTT---EEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECE
T ss_pred             HHHh------ccHHHHHHHHHHHHHHHHHHHHHHhhCCC---ceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEe
Confidence            5443      23455677778999999999999988521   556677888877642    33 3566888899999998


Q ss_pred             CCC--------cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        394 KDG--------RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       394 p~g--------Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      |+.        ||+++.. .++++...++|.+++
T Consensus       336 ~g~~~~~~~~iRi~~~~~-~~~i~~~l~~l~~~l  368 (375)
T 3op7_A          336 PGNRFERDGYVRLGFACE-QETLIKGLEKLSQFL  368 (375)
T ss_dssp             EGGGGTCTTEEEECCCSC-HHHHHHHHHHHHHHH
T ss_pred             ChhhhCCCCeEEEEecCC-HHHHHHHHHHHHHHH
Confidence            752        9998854 477888888887765

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.35  E-value=7.4e-12  Score=123.98  Aligned_cols=123  Identities=44%  Similarity=0.687  Sum_probs=114.2

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      ++++...|..+++||..+..+++..|.++.|+.+|.++++.++++++..|+.|.+.|++...++.|.....+.|+|.+.+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  353 (397)
T 3fsl_A          274 GQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTG  353 (397)
T ss_dssp             HHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECC
T ss_pred             HHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecC
Confidence            45566678899999999999999999999999999999999999999999999999999876667888888999999999


Q ss_pred             CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ++.+++..+.++++|++.+.||||++++++.+|++++++|.++
T Consensus       354 ~~~~~~~~~l~~~gi~v~~g~Ris~~~~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          354 LSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAV  396 (397)
T ss_dssp             CCHHHHHHHHHTTCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCEEECCCCeEEEEecCHhhHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999875

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.33  E-value=6.1e-12  Score=122.91  Aligned_cols=205  Identities=13%  Similarity=0.081  Sum_probs=145.0

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||+.|.     ...++++.|.+|......  ....|.+..| ++||+++++++ |.     +++.|          
T Consensus        15 ~~~id~~~~~-----~~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~-~~-----~~~~i----------   70 (350)
T 3fkd_A           15 SEIVNFSTTV-----WTDGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN-SV-----DNNAI----------   70 (350)
T ss_dssp             -CCEECSCCS-----CCCSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT-TC-----CGGGE----------
T ss_pred             ccEEEccCCC-----CCCCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHE----------
Confidence            6789999996     224567778777766542  4578988877 99999999976 42     24445          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.|||.++.+++..+    . ||+|++++|+|+.|...++..|++                     
T Consensus        71 ------------~~t~g~~~al~~~~~~l----~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~v  133 (350)
T 3fkd_A           71 ------------LVTNGPTAAFYQIAQAF----R-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADFSNMDFC  133 (350)
T ss_dssp             ------------EEESHHHHHHHHHHHHT----T-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCCTTCSEE
T ss_pred             ------------EEcCCHHHHHHHHHHHH----C-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCccCCCCEE
Confidence                        66999999999988754    2 799999999999999998888764                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       134 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~  213 (350)
T 3fkd_A          134 WLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK  213 (350)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH
T ss_pred             EEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH
Confidence                                                                                            


Q ss_pred             ---hhhh-hhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEe
Q psy16707        299 ---KILI-RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCY  373 (420)
Q Consensus       299 ---~~~~-r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~  373 (420)
                         ..+. .....+++..++.++...|.+..   .|.+.++.   .+ ++|+.+.+.|+++ |    +.. .++.|+|.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~---~~-~~~~~l~~~L~~~~~----~~~-~~~~~~~~~  281 (350)
T 3fkd_A          214 DFMKRVAAFSTPWAVNALAIEAAKFILIHPA---QFTLPIRK---WQ-RNTVDFITALNRLDG----VEV-HPSGTTFFL  281 (350)
T ss_dssp             HHHHHHHTTCCTTCSCHHHHHHHHHHHHCTT---TTCCCHHH---HH-HHHHHHHHHHHHSTT----EEE-CCCSSSEEE
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHHhCHH---HHHHHHHH---HH-HHHHHHHHHHhcCCC----cEE-CCCCCcEEE
Confidence               1111 11223567778877777776532   35444443   23 7788899999887 4    444 455677776


Q ss_pred             cCC---CH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        374 TGL---NA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       374 ~~l---~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +.+   +. +.+++|++++||++.|+        +  |||++  +.+.++.+.++++++.
T Consensus       282 ~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~  339 (350)
T 3fkd_A          282 LRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFL  339 (350)
T ss_dssp             EEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence            433   33 55677876699999875        1  99886  5677899999999875

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.32  E-value=2.9e-11  Score=119.82  Aligned_cols=213  Identities=11%  Similarity=0.030  Sum_probs=142.9

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHH-HHHHHHHHH---cCCCCccccCCceeeeccc
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPD-FGKLAAQLA---YGEDCPQLKDNLISIVQGI  235 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~-fr~a~~~~~---~g~~~~~~~~~~i~~~~~~  235 (420)
                      ++.|||++|.   .  ...+++.|.+|.....+. ....|.+.  .++ +|+++++++   +|..   .++++|      
T Consensus        28 ~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~~lr~~la~~l~~~~g~~---~~~~~v------   90 (390)
T 1d2f_A           28 ADLLPFTISD---M--DFATAPCIIEALNQRLMH-GVFGYSRW--KNDEFLAAIAHWFSTQHYTA---IDSQTV------   90 (390)
T ss_dssp             --CEECCSSS---C--SSCCCHHHHHHHHHHHTT-CCCCCCCS--CCHHHHHHHHHHHHHHSCCC---CCGGGE------
T ss_pred             CCeeEeeecC---C--CCCCCHHHHHHHHHHHhC-CCCCCCCC--ChHHHHHHHHHHHHHhcCCC---CCHHHE------
Confidence            4689999996   2  245678888887776643 45688775  788 999999998   3432   234445      


Q ss_pred             CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----------------
Q psy16707        236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-----------------  298 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-----------------  298 (420)
                                      +.|.|||.++.+++..+  +.| ||.|++++|+|+.|...++..|++                 
T Consensus        91 ----------------~~t~g~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~  151 (390)
T 1d2f_A           91 ----------------VYGPSVIYMVSELIRQW--SET-GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDM  151 (390)
T ss_dssp             ----------------EEESCHHHHHHHHHHHS--SCT-TCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCH
T ss_pred             ----------------EEcCCHHHHHHHHHHHh--cCC-CCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCH
Confidence                            66999999999988755  457 899999999999999888766542                 


Q ss_pred             ------------------------------------------------------------------hhh-------h---
Q psy16707        299 ------------------------------------------------------------------KIL-------I---  302 (420)
Q Consensus       299 ------------------------------------------------------------------~~~-------~---  302 (420)
                                                                                        ..+       +   
T Consensus       152 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~~s~  231 (390)
T 1d2f_A          152 GKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSG  231 (390)
T ss_dssp             HHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECS
T ss_pred             HHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhhccCc
Confidence                                                                              000       0   


Q ss_pred             ----------------------------h---hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        303 ----------------------------R---AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDN  351 (420)
Q Consensus       303 ----------------------------r---~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~  351 (420)
                                                  +   ..+++++..++.++...|.+      ..+.++.++++++++|+.+.+.
T Consensus       232 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~  305 (390)
T 1d2f_A          232 SKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ------GAPWLDALRIYLKDNLTYIADK  305 (390)
T ss_dssp             HHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHH
Confidence                                        0   01223333333333322221      1234566778999999999999


Q ss_pred             HHh-c-CCCCCCcccCCCCceEEecC-----CCHH-HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHH
Q psy16707        352 LQK-E-GSNKPWNHITDQIGMFCYTG-----LNAT-QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAK  413 (420)
Q Consensus       352 L~~-~-g~~~~w~~i~~q~GmF~~~~-----l~~~-~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~  413 (420)
                      |++ + |    |....++.|+|.|+.     .+.+ .++.|++++||++.|+        +  |||++. ++++++...+
T Consensus       306 L~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~  380 (390)
T 1d2f_A          306 MNAAFPE----LNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVA  380 (390)
T ss_dssp             HHHHCSS----CCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHH
T ss_pred             HHhhCCC----CEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHH
Confidence            988 4 4    565677778887753     3444 4577766899999874        2  999985 5566776666


Q ss_pred             HHHHHh
Q psy16707        414 AIHAVT  419 (420)
Q Consensus       414 AI~~vv  419 (420)
                      +|.+++
T Consensus       381 ~l~~~l  386 (390)
T 1d2f_A          381 GLINAI  386 (390)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666654

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.28  E-value=5.4e-11  Score=117.33  Aligned_cols=201  Identities=17%  Similarity=0.185  Sum_probs=144.8

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      +.|||+.|+  ++-|   +++.|  +   +   .....|++. +.+++|+++++++ |.     ++++|           
T Consensus        30 ~~i~l~~~~--~~~~---~~~~v--a---~---~~~~~Y~~~-~~~~lr~~la~~~-~~-----~~~~v-----------   78 (356)
T 1fg7_A           30 GDVWLNANE--YPTA---VEFQL--T---Q---QTLNRYPEC-QPKAVIENYAQYA-GV-----KPEQV-----------   78 (356)
T ss_dssp             CSEECSSCC--CSSC---CCCCC--C---C---CCTTSCCCS-SCHHHHHHHHHHH-TS-----CGGGE-----------
T ss_pred             ceEEeeCCC--CCCC---CCHhH--h---h---hhhccCCCc-cHHHHHHHHHHHh-CC-----ChHHE-----------
Confidence            679999997  3333   23334  1   1   245789765 6999999999987 32     23445           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCC-CEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGE-KVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~g-d~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                 +.|.||++++.+++..+  +.| | |+|++++|+|+.|...++..|++                     
T Consensus        79 -----------~~~~G~~~ai~~~~~~~--~~~-g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i  144 (356)
T 1fg7_A           79 -----------LVSRGADEGIELLIRAF--CEP-GKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL  144 (356)
T ss_dssp             -----------EEESHHHHHHHHHHHHH--CCT-TTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSC
T ss_pred             -----------EEcCCHHHHHHHHHHHH--hCC-CCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHh
Confidence                       56999999999988755  457 8 99999999999999888877664                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       145 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G  224 (356)
T 1fg7_A          145 DGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCG  224 (356)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCE
T ss_pred             cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhE
Confidence                                                                                            


Q ss_pred             ---------h--hhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC
Q psy16707        299 ---------K--ILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ  367 (420)
Q Consensus       299 ---------~--~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q  367 (420)
                               .  ...+..| +++..++.++...|.+.    .| +.++.++++++++|+.+.+.|+++|.   +..+.+.
T Consensus       225 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~~----~~-~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~  295 (356)
T 1fg7_A          225 FTLANEEVINLLMKVIAPY-PLSTPVADIAAQALSPQ----GI-VAMRERVAQIIAEREYLIAALKEIPC---VEQVFDS  295 (356)
T ss_dssp             EEEECHHHHHHHHHHSCSS-CSCHHHHHHHHHHTSHH----HH-HHHHHHHHHHHHHHHHHHHHHHHSTT---EEEECCC
T ss_pred             EEEeCHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcCc----cH-HHHHHHHHHHHHHHHHHHHHHHhCCC---ceEECCC
Confidence                     1  1113344 56777787777767642    23 24677779999999999999998751   2234566


Q ss_pred             CceEEecCC-CHH-HHHHHHHhCCeEEeC-C------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707        368 IGMFCYTGL-NAT-QVEKLIKEHSVYLTK-D------G--RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       368 ~GmF~~~~l-~~~-~v~~Ll~e~~Vy~~p-~------g--Ris~agl~~~ni~~la~AI~~v  418 (420)
                      .|+|.|+.+ +.+ .+++| .++||++.| +      +  |||++  +.++++++.++++++
T Consensus       296 ~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          296 ETNYILARFKASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRAE  354 (356)
T ss_dssp             SSSEEEEEETTHHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred             CCeEEEEECCCHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence            789998755 444 45666 799999988 4      2  99987  568899999998875

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.28  E-value=2.5e-11  Score=128.23  Aligned_cols=102  Identities=11%  Similarity=-0.008  Sum_probs=71.3

Q ss_pred             ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCC----CCccccCCceeeecccCC
Q psy16707        162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGE----DCPQLKDNLISIVQGISG  237 (420)
Q Consensus       162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~----~~~~~~~~~i~~~~~~~~  237 (420)
                      .|||++|.   + + .+++..++++.+.+.    ...|.+..|.+++|+++++.++..    ..+...++.|        
T Consensus       106 ~i~l~~g~---~-~-~~~~~~~~al~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I--------  168 (546)
T 2zy4_A          106 SLSYVRDQ---L-G-LDPAAFLHEMVDGIL----GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNL--------  168 (546)
T ss_dssp             HHHHHHHT---S-C-CCHHHHHHHHHHHHH----TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEE--------
T ss_pred             hhecccCC---C-C-CCChHHHHHHHHhhh----cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceE--------
Confidence            78999996   3 2 344555554444432    368999999999999988876422    1100123334        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHH---hcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLK---NFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~---~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                                    +.|.|+++++.+++..+.   .+.| ||+|++++|+|+.|.......
T Consensus       169 --------------~~t~G~~eal~~~~~~l~~~~l~~~-Gd~Vlv~~P~y~~~~~~~~~~  214 (546)
T 2zy4_A          169 --------------FAVEGGTAAMAYIFESLKLNGLLKA-GDKVAIGMPVFTPYIEIPELA  214 (546)
T ss_dssp             --------------EEEEHHHHHHHHHHHHHHHTTSSCT-TCEEEEEESCCHHHHHHHHST
T ss_pred             --------------EEECCHHHHHHHHHHHhhhhhcCCC-CCEEEEeCCCCccHHHHHHHc
Confidence                          679999999999887542   2457 999999999999999876544

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.26  E-value=9e-11  Score=114.26  Aligned_cols=206  Identities=15%  Similarity=0.181  Sum_probs=142.8

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      ++.|||..|..     ..++++.|.+|......+...+.|.+ .|.+++|+++++++-..   .++++.|          
T Consensus        19 ~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v----------   79 (335)
T 1uu1_A           19 RDKTYLALNEN-----PFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNV----------   79 (335)
T ss_dssp             CCSEEESSCCC-----SSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGE----------
T ss_pred             CcceECCCCCC-----CCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHE----------
Confidence            46799999972     23467788887776542223567854 58999999999987432   1234444          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.||++++.+++..+      ||.|+++ |+|+.|...++..|++                     
T Consensus        80 ------------~~~~G~~~al~~~~~~~------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~  140 (335)
T 1uu1_A           80 ------------SVGNGADEIIYVMMLMF------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGD  140 (335)
T ss_dssp             ------------EEESSHHHHHHHHHHHS------SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCCCTTE
T ss_pred             ------------EEcCChHHHHHHHHHHh------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHcCCCC
Confidence                        56999999999987633      6899999 9999999887766653                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       141 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  220 (335)
T 1uu1_A          141 VVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKF  220 (335)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHTTCEEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHH
T ss_pred             EEEEeCCCCCCCCCCCHHHHHHHHHhCCEEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHH
Confidence                                                                                            


Q ss_pred             -hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC
Q psy16707        299 -KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG  375 (420)
Q Consensus       299 -~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~  375 (420)
                       ..+  .+..| +++..++.++...|.+    .+|   ++.++++++++|+.+.+.|++.|    |.. .++.|+|.|+.
T Consensus       221 ~~~l~~~~~~~-~~~~~~~~~~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~-~~~~~~~~~~~  287 (335)
T 1uu1_A          221 IDAYNRVRLPF-NVSYVSQMFAKVALDH----REI---FEERTKFIVEERERMKSALREMG----YRI-TDSRGNFVFVF  287 (335)
T ss_dssp             HHHHHHHSCTT-CSCHHHHHHHHHHHHT----HHH---HHHHHHHHHHHHHHHHHHHHHHT----CCB-CCCCSSEEEEE
T ss_pred             HHHHHHhcCCC-CcCHHHHHHHHHHhCC----HHH---HHHHHHHHHHHHHHHHHHHHHCC----cEE-cCCCCeEEEEE
Confidence             111  12223 5667777777766643    123   45566889999999999999886    443 45678888876


Q ss_pred             CC---H-HHHHHHHHhCCeEEeCC-C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        376 LN---A-TQVEKLIKEHSVYLTKD-G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       376 l~---~-~~v~~Ll~e~~Vy~~p~-g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      ++   . +..+.|. ++||++.|+ +  |||++.  .+.++.+.+++.+++
T Consensus       288 ~~~~~~~~~~~~l~-~~gi~v~~~~~~iRis~~~--~~~i~~~~~~l~~~~  335 (335)
T 1uu1_A          288 MEKEEKERLLEHLR-TKNVAVRSFREGVRITIGK--REENDMILRELEVFK  335 (335)
T ss_dssp             CCTHHHHHHHHHHH-HHTEEEEEETTEEEEECCC--HHHHHHHHHHHHCC-
T ss_pred             CCCCCHHHHHHHHH-HCCEEEEECCCeEEEEeCC--HHHHHHHHHHHHhhC
Confidence            64   2 3446665 679999873 2  999864  456888888887653

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.23  E-value=1e-10  Score=114.13  Aligned_cols=205  Identities=13%  Similarity=0.141  Sum_probs=141.9

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      .+.+.|||+.|.   +  ..++++.|.+|......+  ...| |..|.+++++++++++ +.     +++.|        
T Consensus        24 ~~~~~idl~~~~---~--~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~-~~-----~~~~i--------   81 (361)
T 3ftb_A           24 KGRELLDYSSNI---N--PLGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL-KL-----KDIGI--------   81 (361)
T ss_dssp             ----CEETTCCC---C--TTCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH-TC-----CSCEE--------
T ss_pred             CCCCEEEecCCC---C--CCCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh-CC-----CcceE--------
Confidence            456789999996   2  234567787777666543  4677 5689999999999987 32     23444        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                    +.|.|||+|+.+++..+       |.|++++|+|+.|...++..|++                   
T Consensus        82 --------------~~~~g~t~al~~~~~~~-------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~  140 (361)
T 3ftb_A           82 --------------VLGNGASEIIELSISLF-------EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIIS  140 (361)
T ss_dssp             --------------EEESSHHHHHHHHHTTC-------SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHH
T ss_pred             --------------EEcCCHHHHHHHHHHHc-------CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHH
Confidence                          56999999999987522       79999999999999988887764                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       141 ~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  220 (361)
T 3ftb_A          141 KIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMP  220 (361)
T ss_dssp             HTTTCSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCG
T ss_pred             hccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCC
Confidence                                                                                            


Q ss_pred             ---------------hhh--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16707        299 ---------------KIL--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPW  361 (420)
Q Consensus       299 ---------------~~~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w  361 (420)
                                     ..+  .+. ..+++..++.++...|.+    .+   .++.++++++++|+.+.+.|++++.   +
T Consensus       221 G~r~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~----~~---~~~~~~~~~~~~~~~l~~~l~~~~~---~  289 (361)
T 3ftb_A          221 GIRFGYGITNNKEIAAKIKAKQN-PWNINCFAEMAAINCLKD----TN---YIEESLLWIKKERKRFIEELNKIGF---I  289 (361)
T ss_dssp             GGCCEEEEESCHHHHHHHHTTSC-TTCSCHHHHHHHHHTSSC----HH---HHHHHHHHHHHHHHHHHHHHHHSSS---E
T ss_pred             CcceeEEEeCCHHHHHHHHhhCC-CCCCCHHHHHHHHHHhcC----HH---HHHHHHHHHHHHHHHHHHHHHhCCC---C
Confidence                           000  111 224566677666666654    23   4556668999999999999998731   4


Q ss_pred             cccCCCCceEEecCC---CHH-HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        362 NHITDQIGMFCYTGL---NAT-QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       362 ~~i~~q~GmF~~~~l---~~~-~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      .++.++.|.|.|+.+   +.+ .++.|+ ++||++.|+        +  |||++  +.++++++.++++++.
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~  358 (361)
T 3ftb_A          290 KRVFSPHANFVLCRLENISGEKLYDSLL-KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVE  358 (361)
T ss_dssp             EEEECCSSSEEEEEESSSCHHHHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             ceecCCCCeEEEEEcCCCCHHHHHHHHH-HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHH
Confidence            424456677776543   444 456665 559999874        2  88886  5667889999998764

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=98.86  E-value=1e-12  Score=130.86  Aligned_cols=217  Identities=11%  Similarity=0.045  Sum_probs=145.2

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.|||++|.   +  ..++++.|.+|......+ ..+.|.+.  .+++++++++++....+..+++++|          
T Consensus        31 ~~~i~l~~~~---~--~~~~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v----------   92 (392)
T 3b1d_A           31 PQLLPAWIAD---M--DFEVMPEVKQAIHDYAEQ-LVYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDI----------   92 (392)
Confidence            3789999996   3  345667777776665532 45778765  8999999999874332222334444          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc---------------------
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE---------------------  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~---------------------  298 (420)
                                  +.|.||+.|+.+++..+  +.| ||.|++++|+|+.|...++..|++                     
T Consensus        93 ------------~~~~g~~~a~~~~~~~~--~~~-gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~  157 (392)
T 3b1d_A           93 ------------VFVEGVVPAISIAIQAF--TKE-GEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLE  157 (392)
Confidence                        56999999999888755  347 899999999999998655544321                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       158 ~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~s  237 (392)
T 3b1d_A          158 NDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSAT  237 (392)
Confidence                                                                                            


Q ss_pred             ----------------hh-hh------hhcc--CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ----------------KI-LI------RAFY--SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQ  353 (420)
Q Consensus       299 ----------------~~-~~------r~~~--s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~  353 (420)
                                      .. ++      +..+  ++++..++.++...|.+.      .+.++.++++++++|+.+.+.|+
T Consensus       238 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~  311 (392)
T 3b1d_A          238 KTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG------KPWLVALKAVLEENIQFAVEYFA  311 (392)
Confidence                            00 00      0111  223333333333333321      23456667889999999999988


Q ss_pred             h-c-CCCCCCcccCCCCceEEecCCC-----H-HHHHHHHHhCCeEEeCC----------CcEEEcccCCCCHHHHHHHH
Q psy16707        354 K-E-GSNKPWNHITDQIGMFCYTGLN-----A-TQVEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAI  415 (420)
Q Consensus       354 ~-~-g~~~~w~~i~~q~GmF~~~~l~-----~-~~v~~Ll~e~~Vy~~p~----------gRis~agl~~~ni~~la~AI  415 (420)
                      + + |    |....++.|||.|+.++     . +.+++|++++||++.|+          -||+++. ++++|+...++|
T Consensus       312 ~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l  386 (392)
T 3b1d_A          312 QEAPR----LKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRI  386 (392)
Confidence            7 4 3    66677788888886443     2 34577767899999874          2999885 688899998888


Q ss_pred             HHHhC
Q psy16707        416 HAVTK  420 (420)
Q Consensus       416 ~~vv~  420 (420)
                      .++++
T Consensus       387 ~~~l~  391 (392)
T 3b1d_A          387 VCCLP  391 (392)
Confidence            87653

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.22  E-value=3.3e-10  Score=111.37  Aligned_cols=216  Identities=13%  Similarity=0.037  Sum_probs=148.1

Q ss_pred             hHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcccc
Q psy16707        146 SSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLK  225 (420)
Q Consensus       146 ~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~  225 (420)
                      .+..+...+..+ ..+.|||+.|.   ++  ..+++.|.+|......+  .+.|.+ .|.+++++++++++ |.     +
T Consensus        11 ~~~~~~~~~~~~-~~~~idl~~~~---~~--~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~-~~-----~   75 (364)
T 1lc5_A           11 NIREPATVLGIS-PDQLLDFSANI---NP--LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH-QV-----P   75 (364)
T ss_dssp             CCHHHHHHHTSC-GGGSEECSSCC---CT--TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH-TS-----C
T ss_pred             cHHHHHHhcCCC-ccceEEecccc---CC--CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH-Cc-----C
Confidence            345555555433 34689999996   21  23567788777665532  467854 59999999999987 32     2


Q ss_pred             CCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-------
Q psy16707        226 DNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-------  298 (420)
Q Consensus       226 ~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-------  298 (420)
                      ++.|                      +.|.|||.++.+++..+    + ||.|++++|+|+.|...++..|++       
T Consensus        76 ~~~v----------------------~~~~g~~~al~~~~~~~----~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~  128 (364)
T 1lc5_A           76 ASWI----------------------LAGNGETESIFTVASGL----K-PRRAMIVTPGFAEYGRALAQSGCEIRRWSLR  128 (364)
T ss_dssp             GGGE----------------------EEESSHHHHHHHHHHHH----C-CSEEEEEESCCTHHHHHHHHTTCEEEEEECC
T ss_pred             HHHE----------------------EECCCHHHHHHHHHHHc----C-CCeEEEeCCCcHHHHHHHHHcCCeEEEEeCC
Confidence            3444                      56999999999988755    6 799999999999998877766542       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       129 ~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  208 (364)
T 1lc5_A          129 EADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHI  208 (364)
T ss_dssp             GGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTE
T ss_pred             cccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCE
Confidence                                                                                            


Q ss_pred             ------------------------hh----h--hhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ------------------------KI----L--IRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL  348 (420)
Q Consensus       299 ------------------------~~----~--~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l  348 (420)
                                              ..    +  .+..| +++..++.++...|.+    .   +.++.++++++++|+.+
T Consensus       209 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~l~~----~---~~~~~~~~~~~~~~~~l  280 (364)
T 1lc5_A          209 WVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPW-SVNALAALAGEVALQD----S---AWQQATWHWLREEGARF  280 (364)
T ss_dssp             EEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTT-CSCHHHHHHHHHGGGC----H---HHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCCC-CCCHHHHHHHHHHHhC----c---HHHHHHHHHHHHHHHHH
Confidence                                    00    0  01122 3455666666655654    2   34556668999999999


Q ss_pred             HHHHHhc-CCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHH
Q psy16707        349 KDNLQKE-GSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKA  414 (420)
Q Consensus       349 ~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~A  414 (420)
                      .+.|+++ |    +... ++.|+|.|+.++   .+.++.|+ ++||++.|+        +  |||++  +.+.++++.++
T Consensus       281 ~~~L~~~~~----~~~~-~~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~  352 (364)
T 1lc5_A          281 YQALCQLPL----LTVY-PGRANYLLLRCEREDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAA  352 (364)
T ss_dssp             HHHHHTSTT----EEEC-CCSSSEEEEEESCTTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHH
T ss_pred             HHHHhcCCC----CEEC-CCCCeEEEEECCCcHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHH
Confidence            9999876 4    5544 466788876443   24566775 679999874        2  88976  46678899999


Q ss_pred             HHHHh
Q psy16707        415 IHAVT  419 (420)
Q Consensus       415 I~~vv  419 (420)
                      +.+++
T Consensus       353 l~~~~  357 (364)
T 1lc5_A          353 LRNVL  357 (364)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            98865

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.18  E-value=3.5e-10  Score=112.31  Aligned_cols=215  Identities=12%  Similarity=0.025  Sum_probs=142.7

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHcc--CCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK--NLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~--~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      +.+.|||+.|.+   -+ .++++.|.++......+  .....|.+..|.+++++++++++-...+.    +.+       
T Consensus        42 g~~~idl~~~~~---~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v-------  106 (398)
T 3a2b_A           42 GRRVLMFGSNSY---LG-LTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAA-------  106 (398)
T ss_dssp             TEEEEECSCSCT---TC-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEE-------
T ss_pred             CceEEEeecccc---cC-CCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcE-------
Confidence            346799999963   12 33566677666655433  12335677889999988888877322111    123       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc------------------
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE------------------  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~------------------  298 (420)
                                     +.|.|||.|+.+++..+  +.| ||.|++++|+|+.|...++..|++                  
T Consensus       107 ---------------~~~~ggt~a~~~~~~~~--~~~-gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~  168 (398)
T 3a2b_A          107 ---------------ILFSTGFQSNLGPLSCL--MGR-NDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSR  168 (398)
T ss_dssp             ---------------EEESSHHHHHHHHHHHS--SCT-TCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHT
T ss_pred             ---------------EEECCHHHHHHHHHHHH--hCC-CCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHh
Confidence                           67999999999988754  457 999999999999999888777653                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       169 ~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~  248 (398)
T 3a2b_A          169 LPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASL  248 (398)
T ss_dssp             SCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS
T ss_pred             hccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCC
Confidence                                                                                            


Q ss_pred             -----------hhhh---h-hccCCCchHHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q psy16707        299 -----------KILI---R-AFYSSPPIHGARI-VQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWN  362 (420)
Q Consensus       299 -----------~~~~---r-~~~s~pp~~ga~i-v~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~  362 (420)
                                 ..+.   + ...++++...+.+ +...|     + .+ ++++.++++++++|+.+.+.|++.|    |.
T Consensus       249 GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l-----~-~~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~  317 (398)
T 3a2b_A          249 GGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKAL-----E-II-QNEPEHIEKLWKNTDYAKAQLLDHG----FD  317 (398)
T ss_dssp             CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH-----H-HH-HHCTHHHHHHHHHHHHHHHHHHHTT----CC
T ss_pred             CcEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHH-----H-HH-hhCHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence                       0000   0 1112222222221 11222     1 12 3456778999999999999999986    55


Q ss_pred             ccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-----------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        363 HITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------GRISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       363 ~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-----------gRis~ag-l~~~ni~~la~AI~~vv  419 (420)
                      .+. +.|+|.|+.++    . +.+++|+++ ||++.|+           -||+++. .+.++++++.++|.+++
T Consensus       318 ~~~-~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l  389 (398)
T 3a2b_A          318 LGA-TESPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVF  389 (398)
T ss_dssp             BCS-CCSSEEEEECCCHHHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             cCC-CCCCEEEEEcCCHHHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence            444 44788886554    2 345677655 9999874           2999987 58889999999998875

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.12  E-value=4.5e-10  Score=112.22  Aligned_cols=124  Identities=42%  Similarity=0.727  Sum_probs=113.3

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ..+++...|..+++||..+..++...|.+.++.++|.+.++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+.
T Consensus       284 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  363 (412)
T 1yaa_A          284 TSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFT  363 (412)
T ss_dssp             HHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEEC
T ss_pred             HHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEee
Confidence            34566667888999999999999999999999999999999999999999999999999987666688888899999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +++.+++..+.++++|++.+..||+++.++..+++.++++|.++
T Consensus       364 ~~~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~  407 (412)
T 1yaa_A          364 GLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             CCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCEEeccCcEEEEccCCHhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999876

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.11  E-value=4.7e-10  Score=111.03  Aligned_cols=123  Identities=32%  Similarity=0.636  Sum_probs=111.3

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++...|..|++||..+..++...|.+.+|+..|.+.++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+.++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~  350 (394)
T 2ay1_A          271 AMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA  350 (394)
T ss_dssp             HHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC
T ss_pred             HHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCC
Confidence            34445678899989999999999999999999999999999999999999999999988766568877778899999999


Q ss_pred             CHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhC
Q psy16707         86 NATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        86 ~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~  128 (420)
                      +++++..+.++++|++.+..||+++.++..++++++++|.++|
T Consensus       351 ~~~~~~~~l~~~gi~v~~~~Ris~~~~~~~~i~~~~~~l~~~~  393 (394)
T 2ay1_A          351 TPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVG  393 (394)
T ss_dssp             CHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHhCCEEecCCCeEEeecCCHhhHHHHHHHHHHcc
Confidence            9999998888999999999999999899999999999999885

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.03  E-value=2.6e-09  Score=104.58  Aligned_cols=205  Identities=12%  Similarity=0.088  Sum_probs=138.0

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCcccccc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGA  245 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~  245 (420)
                      .|.|..+-.++++.|.+|....    ..+.|.+.  ..++++++++++   +|.+    +++.|                
T Consensus        21 ~~l~~~~~~~~~~~v~~a~~~~----~~~~~~~~--~~~~~~~~~~~la~~~g~~----~~~~v----------------   74 (386)
T 2dr1_A           21 YKLFTAGPVACFPEVLEIMKVQ----MFSHRSKE--YRKVHMDTVERLREFLEVE----KGEVL----------------   74 (386)
T ss_dssp             SEECCSSSCCCCHHHHHHTTSC----CCCTTSHH--HHHHHHHHHHHHHHHHTCS----SSEEE----------------
T ss_pred             ceeecCCCcCCcHHHHHHHhcc----cccccCHH--HHHHHHHHHHHHHHHhCCC----CCcEE----------------
Confidence            5666666677788888775432    23467543  256677766665   4532    12323                


Q ss_pred             ccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC--cHHHHhhcCcc-------------------------
Q psy16707        246 AFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN--HIPICKHTGLE-------------------------  298 (420)
Q Consensus       246 ~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n--y~~i~~~aG~~-------------------------  298 (420)
                            +.|.|||.|+.+++..+  +.| ||+|++++|+|+.  |...++..|++                         
T Consensus        75 ------~~~~g~t~a~~~~~~~l--~~~-gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~  145 (386)
T 2dr1_A           75 ------LVPSSGTGIMEASIRNG--VSK-GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNP  145 (386)
T ss_dssp             ------EESSCHHHHHHHHHHHH--SCT-TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCT
T ss_pred             ------EEeCChHHHHHHHHHHh--hcC-CCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCC
Confidence                  67999999999988755  457 8999999999998  88777777764                         


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       146 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~  225 (386)
T 2dr1_A          146 DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERF  225 (386)
T ss_dssp             TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHH
T ss_pred             CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHH
Confidence                                                                                            


Q ss_pred             -hhh---------------------hhhccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Q psy16707        299 -KIL---------------------IRAFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQK  354 (420)
Q Consensus       299 -~~~---------------------~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~  354 (420)
                       ..+                     .+....+++..++..+...|      +.+.++  ++.++++++++++.+.+.|++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l------~~~~~~g~~~~~~~~~~~~~~~l~~~L~~  299 (386)
T 2dr1_A          226 LEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVAL------RIIEKMGGKEKWLEMYEKRAKMVREGVRE  299 (386)
T ss_dssp             HHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHH------HHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHH------HHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence             111                     01223345555555444433      233343  677889999999999999998


Q ss_pred             cCCCCCCcccCCC---CceEEec----CCCHH-HHHHHHHhCCeEEeCC------C--cEEEcc-cCCCCHHHHHHHHHH
Q psy16707        355 EGSNKPWNHITDQ---IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD------G--RISMAG-VTSKNVGYLAKAIHA  417 (420)
Q Consensus       355 ~g~~~~w~~i~~q---~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~------g--Ris~ag-l~~~ni~~la~AI~~  417 (420)
                      .|    +....++   .|.|.++    +.+.+ .+++|+++ ||++.|+      +  ||+++. .+.++++++.++|.+
T Consensus       300 ~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  374 (386)
T 2dr1_A          300 IG----LDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLRE  374 (386)
T ss_dssp             TT----CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             cC----CeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            86    4444443   3666654    33444 45677555 9999874      2  999986 688999999999988


Q ss_pred             Hh
Q psy16707        418 VT  419 (420)
Q Consensus       418 vv  419 (420)
                      ++
T Consensus       375 ~~  376 (386)
T 2dr1_A          375 VI  376 (386)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.01  E-value=2.7e-09  Score=106.41  Aligned_cols=123  Identities=49%  Similarity=0.840  Sum_probs=111.3

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .++....|..|++||..+..++...|.+.++..+|.+.++.++++++..|..|.+.|++.+.++.|..+..+.|+|.+.+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  364 (412)
T 1ajs_A          285 SQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTG  364 (412)
T ss_dssp             HHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECC
T ss_pred             HHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeC
Confidence            34555677889988999999999999999999999999999999999999999999999876667888888999999999


Q ss_pred             CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ++.+.+..+.++++|++.+.+||+++.++..+++.+.++|.++
T Consensus       365 ~~~~~~~~~l~~~gv~v~~~~Ris~~~~~~~~i~~~~~~l~~~  407 (412)
T 1ajs_A          365 LNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA  407 (412)
T ss_dssp             CCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCEEecCCcEEEeeeCCHHHHHHHHHHHHHH
Confidence            9998999888899999999999999988999999999998875

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=98.99  E-value=2.5e-09  Score=105.67  Aligned_cols=122  Identities=42%  Similarity=0.667  Sum_probs=108.8

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .+....|..|++||..+..++...|++.+|+..|.+.++.++++++..|+.|.+.|++.+.++.|..+..+.|||.+.++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  353 (396)
T 2q7w_A          274 QMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGL  353 (396)
T ss_dssp             HHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCC
T ss_pred             HHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecC
Confidence            34445678899989999999999999999999999999999999999999999999998766568777789999999999


Q ss_pred             CHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         86 NATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +.+.+..+.++++|++.+..||+++.++..+++.++++|.++
T Consensus       354 ~~~~~~~~l~~~gv~v~~~~Ris~~~~~~e~i~~~~~~l~~~  395 (396)
T 2q7w_A          354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             CHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcCeeecCCceEEEeecCHHHHHHHHHHHHhc
Confidence            999999888899999999999999988999999999999865

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=98.99  E-value=2.9e-09  Score=105.49  Aligned_cols=104  Identities=12%  Similarity=-0.022  Sum_probs=72.4

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccC------CCCCCCC--CCCCHHHHHHHHHHHcCCCCccccCCceeee
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN------LDKEYAP--IIGAPDFGKLAAQLAYGEDCPQLKDNLISIV  232 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~------~~~~Y~p--~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~  232 (420)
                      +.|+|..|.+    +  +.++.|.+|......+.      ..+.|.+  ..|.+++++++++++ |..    +++.|   
T Consensus        28 ~~i~l~~~~~----~--~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-~~~----~~~~v---   93 (420)
T 1t3i_A           28 PLVYLDNAAT----S--QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI-NAR----SPREI---   93 (420)
T ss_dssp             ECEECBTTTC----C--CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT-TCS----CGGGE---
T ss_pred             ceEEecCCcc----C--CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc-CCC----CCCeE---
Confidence            4799999973    2  45567777766655431      1245654  578899999999976 431    13344   


Q ss_pred             cccCCCCccccccccccceeecccchHHHHHHHHHHH--hcCCCCCEEEEcCCCCCC----cHHHHhhcCcc
Q psy16707        233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK--NFFPGEKVIYVPTPTWGN----HIPICKHTGLE  298 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~--~~~p~gd~VlvpdP~w~n----y~~i~~~aG~~  298 (420)
                                         +.|.|||.|+.+++..+.  .+.| ||.|++++|+|+.    |..+++..|++
T Consensus        94 -------------------~~~~g~t~a~~~~~~~~~~~~~~~-gd~Vl~~~~~~~~~~~~~~~~~~~~g~~  145 (420)
T 1t3i_A           94 -------------------VYTRNATEAINLVAYSWGMNNLKA-GDEIITTVMEHHSNLVPWQMVAAKTGAV  145 (420)
T ss_dssp             -------------------EEESSHHHHHHHHHHHTHHHHCCT-TCEEEEETTCCGGGTHHHHHHHHHHCCE
T ss_pred             -------------------EEcCChHHHHHHHHHHhhhcccCC-CCEEEECcchhHHHHHHHHHHHHhcCcE
Confidence                               669999999999887551  1457 8999999999999    55666666654

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=98.98  E-value=5.2e-09  Score=102.23  Aligned_cols=212  Identities=16%  Similarity=0.182  Sum_probs=139.9

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccC-CC----C--CCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKN-LD----K--EYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-~~----~--~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      .|.|..+..++++.|.+|......+. .+    +  .|.+..|.++|++++++++ |.     +++.|            
T Consensus         3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~v------------   64 (384)
T 1eg5_A            3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL-GV-----SPSEI------------   64 (384)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TS-----CGGGE------------
T ss_pred             EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc-CC-----CCCeE------------
Confidence            35565556688888888887765431 01    1  2344567799999999977 42     23444            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHH---hhcCcc------------------
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPIC---KHTGLE------------------  298 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~---~~aG~~------------------  298 (420)
                                +.|.|||.|+.+++..+..  ..| ||+|++++|+|+.+...+   +..|++                  
T Consensus        65 ----------~~~~g~t~a~~~~~~~~~~~~~~~-gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~  133 (384)
T 1eg5_A           65 ----------FFTSCATESINWILKTVAETFEKR-KRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELE  133 (384)
T ss_dssp             ----------EEESCHHHHHHHHHHHHHHHTTTT-CCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHH
T ss_pred             ----------EEECCHHHHHHHHHHhhhhhccCC-CCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHH
Confidence                      5699999999998876641  147 899999999999886655   555653                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       134 ~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~  213 (384)
T 1eg5_A          134 KLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGIT  213 (384)
T ss_dssp             HHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEE
T ss_pred             HHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEE
Confidence                                                                                            


Q ss_pred             ---hhh-hh-----------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707        299 ---KIL-IR-----------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH  363 (420)
Q Consensus       299 ---~~~-~r-----------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~  363 (420)
                         ..+ ++           ....+++..++..+...|.      .+.+.++.++++++++|+.+.+.|++.|    +..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~  283 (384)
T 1eg5_A          214 YIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAME------IAVEELSEAAKHMEKLRSKLVSGLMNLG----AHI  283 (384)
T ss_dssp             EECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHH------HHHHTHHHHHHHHHHHHHHHHHHHHTTT----CEE
T ss_pred             EEcCCCccccccccCcccccccCCCCChHHHHHHHHHHH------HHHHhHHHHHHHHHHHHHHHHHHhCCCC----eEE
Confidence               111 11           1223455556655544342      2345677788999999999999999855    444


Q ss_pred             cCCCC----ceEE--ecCCCHHHHHHHHHhCCeEEeCC-------------------------C--cEEEcc-cCCCCHH
Q psy16707        364 ITDQI----GMFC--YTGLNATQVEKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVG  409 (420)
Q Consensus       364 i~~q~----GmF~--~~~l~~~~v~~Ll~e~~Vy~~p~-------------------------g--Ris~ag-l~~~ni~  409 (420)
                      +.++.    +++.  +.+.+.+.+...+.++||++.++                         +  ||+++. .+.++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~  363 (384)
T 1eg5_A          284 ITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVD  363 (384)
T ss_dssp             CSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHH
T ss_pred             eCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHH
Confidence            44321    1222  23455555533447899999873                         2  999874 5788999


Q ss_pred             HHHHHHHHHh
Q psy16707        410 YLAKAIHAVT  419 (420)
Q Consensus       410 ~la~AI~~vv  419 (420)
                      ++.++|.+++
T Consensus       364 ~~~~~l~~~~  373 (384)
T 1eg5_A          364 YFLKKIEEIL  373 (384)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=98.97  E-value=6.2e-09  Score=102.58  Aligned_cols=82  Identities=16%  Similarity=0.243  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeC-------CC---
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTK-------DG---  396 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p-------~g---  396 (420)
                      +.++.++++++++|+.+.+.|++.|    |... ++.|.|.|+.++     .+.+++|+ ++||++.|       .+   
T Consensus       295 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~  368 (399)
T 3tqx_A          295 TEGPQLRKQLQENSRYFRAGMEKLG----FQLV-PGNHPIIPVMLGDAQLATNMADHLL-QEGIYVVGFSYPVVPMGKAR  368 (399)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHT----CCBC-CCSSSEEEEEEECHHHHHHHHHHHH-HTTEECCEECTTTSCTTCEE
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHcC----CCcC-CCCCCEEEEEeCCHHHHHHHHHHHH-HCCCEEeeeCCCCCCCCCce
Confidence            4467888999999999999999997    5555 445556654332     24556675 57999984       22   


Q ss_pred             -cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        397 -RISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -Ris~a-gl~~~ni~~la~AI~~vv  419 (420)
                       ||+++ ..+.++++++.++|.+++
T Consensus       369 iRi~~~~~~~~~~i~~~~~~l~~~~  393 (399)
T 3tqx_A          369 IRVQMSAVHTQQQLDRAIEAFGQVG  393 (399)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCHHHHHHHHHHHHHHH
Confidence             99997 568899999999998875

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=98.95  E-value=3.3e-09  Score=104.47  Aligned_cols=87  Identities=10%  Similarity=0.071  Sum_probs=62.9

Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CC---CceEEec----CCCH-HHHHHHHHhCCeEEeCCC--
Q psy16707        329 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQ---IGMFCYT----GLNA-TQVEKLIKEHSVYLTKDG--  396 (420)
Q Consensus       329 ~w~~e-l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q---~GmF~~~----~l~~-~~v~~Ll~e~~Vy~~p~g--  396 (420)
                      .|.++ ++.++++++++|+.+.+.|+++|    +.... .+   .+.|.++    +.+. +.+++|.+++||++.++.  
T Consensus       262 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~  337 (392)
T 2z9v_A          262 LYLNEGPEAVWARHALTAKAMRAGVTAMG----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE  337 (392)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG
T ss_pred             HHHhccHHHHHHHHHHHHHHHHHHHHHcC----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC
Confidence            34445 77888999999999999999875    44444 21   3444443    3444 455778766799998752  


Q ss_pred             ------cEEE-c-ccCCCCHHHHHHHHHHHh
Q psy16707        397 ------RISM-A-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 ------Ris~-a-gl~~~ni~~la~AI~~vv  419 (420)
                            ||++ + ..+.++++++.++|.+++
T Consensus       338 ~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~  368 (392)
T 2z9v_A          338 TLGKLTRIGHMGPTAQPIYAIAALTALGGAM  368 (392)
T ss_dssp             GTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEeCcccccCHHHHHHHHHHHHHHH
Confidence                  9995 5 589999999999998875

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=98.94  E-value=1.4e-08  Score=100.25  Aligned_cols=103  Identities=17%  Similarity=0.247  Sum_probs=67.5

Q ss_pred             CCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC---ceEEec----CCCHH
Q psy16707        308 SPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCYT----GLNAT  379 (420)
Q Consensus       308 ~pp~~ga~iv~~IL~dp~L~~~w~~-el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~---GmF~~~----~l~~~  379 (420)
                      +++..++..+...|.      .+.+ .++.++++++++|+.+.+.|++.|    +..+.++.   +.|.++    +.+.+
T Consensus       272 ~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (393)
T 1vjo_A          272 TAPINLYYALREALR------LIAQEGLANCWQRHQKNVEYLWERLEDIG----LSLHVEKEYRLPTLTTVCIPDGVDGK  341 (393)
T ss_dssp             CCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCTTCCHH
T ss_pred             CCCHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHHHHHHHHHHcC----CcccCCccccCCcEEEEEcCCCCCHH
Confidence            555555554444332      2222 367788999999999999999886    55444432   233332    34444


Q ss_pred             -HHHHHHHhCCeEEeCC------C--cEEEccc--CCCCHHHHHHHHHHHhC
Q psy16707        380 -QVEKLIKEHSVYLTKD------G--RISMAGV--TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       380 -~v~~Ll~e~~Vy~~p~------g--Ris~agl--~~~ni~~la~AI~~vv~  420 (420)
                       .++.|++++||++.|+      +  ||++.+.  ++++++++.++|.++++
T Consensus       342 ~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~  393 (393)
T 1vjo_A          342 AVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  393 (393)
T ss_dssp             HHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence             5577877779999874      2  9996443  34469999999998864

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=98.91  E-value=1.7e-08  Score=97.58  Aligned_cols=208  Identities=13%  Similarity=0.085  Sum_probs=137.4

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecc
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~  234 (420)
                      .++..|+|..+.      ..++++.|.+|......     .|.+..|..++++++++++   +|.     ++++|     
T Consensus        11 ~~p~~i~l~~~~------~~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g~-----~~~~v-----   69 (359)
T 1svv_A           11 AKPKPYSFVNDY------SVGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLER-----PDADV-----   69 (359)
T ss_dssp             ----CEECSCSC------SSCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHTC-----TTSEE-----
T ss_pred             CCCeeEEecCCC------cCCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhCC-----CCccE-----
Confidence            345678887753      23677788888776542     4777889999999998887   452     23444     


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH--HHhhcCcc--------------
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP--ICKHTGLE--------------  298 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~--i~~~aG~~--------------  298 (420)
                                       +.|.|||.|+.+++..+  ..| ||.|++++|+|+.|..  .++..|++              
T Consensus        70 -----------------~~~~g~t~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~  129 (359)
T 1svv_A           70 -----------------HFISGGTQTNLIACSLA--LRP-WEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVA  129 (359)
T ss_dssp             -----------------EEESCHHHHHHHHHHHH--CCT-TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHH
T ss_pred             -----------------EEeCCchHHHHHHHHHH--hCC-CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHH
Confidence                             56999999999998765  447 8999999999998865  24433331              


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       130 ~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~  209 (359)
T 1svv_A          130 DIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDM  209 (359)
T ss_dssp             HHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSE
T ss_pred             HHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCE
Confidence                                                                                            


Q ss_pred             --------------------hhh---hh-----hc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 --------------------KIL---IR-----AF--YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSL  348 (420)
Q Consensus       299 --------------------~~~---~r-----~~--~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l  348 (420)
                                          ..+   .+     ..  ++.++..++.+ ..+|.+        ..++.++++++++|+.+
T Consensus       210 ~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~--------~~~~~~~~~~~~~~~~l  280 (359)
T 1svv_A          210 FYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQF-EVLMKD--------NLFFELGAHSNKMAAIL  280 (359)
T ss_dssp             EEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHH-HHHTST--------THHHHHHHHHHHHHHHH
T ss_pred             EEEecccCCCCCceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHH-HHHHhh--------hhHHHHHHHHHHHHHHH
Confidence                                000   00     00  01111112221 122322        12355678899999999


Q ss_pred             HHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeC---CC----cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        349 KDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK---DG----RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       349 ~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p---~g----Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                      .+.|+..|    |..+.+..++|.|..++.+.+++|++++||++.+   .+    ||++.. .+.++++++.++|.+++
T Consensus       281 ~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~  355 (359)
T 1svv_A          281 KAGLEACG----IRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLV  355 (359)
T ss_dssp             HHHHHHTT----CCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC-
T ss_pred             HHHhccCC----eEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHH
Confidence            99995444    6666677889998888778888898777999853   22    898653 57889999999998875

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=98.90  E-value=1.2e-08  Score=100.51  Aligned_cols=84  Identities=14%  Similarity=0.170  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC----ceEEec----CCCHH-HHHHHHHhCCeEEeCC------C
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYT----GLNAT-QVEKLIKEHSVYLTKD------G  396 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~----GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~------g  396 (420)
                      +.++.++++++++|+.+.+.|+++|    +..+.++.    |.|.++    +.+.+ .+++|++++||++.++      +
T Consensus       278 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~  353 (396)
T 2ch1_A          278 EGLENQIKRRIECAQILYEGLGKMG----LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGK  353 (396)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHHT----CCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHCC----CeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCC
Confidence            4477788999999999999999886    55555443    234443    34554 4577877789999874      2


Q ss_pred             --cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707        397 --RISMAG--VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 --Ris~ag--l~~~ni~~la~AI~~vv  419 (420)
                        ||++.+  .++++++++.++|.+++
T Consensus       354 ~iRi~~~~~~~~~e~i~~~~~~l~~~l  380 (396)
T 2ch1_A          354 AWRVGIMGECSTVQKIQFYLYGFKESL  380 (396)
T ss_dssp             EEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCcCCHHHHHHHHHHHHHHH
Confidence              999854  46778999999998875

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=98.87  E-value=4.8e-08  Score=95.42  Aligned_cols=211  Identities=15%  Similarity=0.052  Sum_probs=136.7

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccC-CC--CCCCC----CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKN-LD--KEYAP----IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~-~~--~~Y~p----~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      .|.|..+..++++.|.+|......+. .+  ..|.+    ..+..++++++++++ |.+     ++.|            
T Consensus         2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~v------------   63 (382)
T 4eb5_A            2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV-NGG-----GGTV------------   63 (382)
T ss_dssp             CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TCT-----TEEE------------
T ss_pred             eeeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeE------------
Confidence            37777777788999999888766431 11  12432    246788899999875 432     2334            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHHhh---cCcc------------------
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPICKH---TGLE------------------  298 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~~~---aG~~------------------  298 (420)
                                +.|.|||.|+.+++..+..  ..| ||+|++++|+|+.+...++.   .|++                  
T Consensus        64 ----------~~~~g~t~a~~~~~~~l~~~~~~~-gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~  132 (382)
T 4eb5_A           64 ----------VFTSGATEANNLAIIGYAMRNARK-GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFID  132 (382)
T ss_dssp             ----------EEESSHHHHHHHHHHHHHHHHGGG-CCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHH
T ss_pred             ----------EEcCchHHHHHHHHHHHHhhccCC-CCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHH
Confidence                      6799999999998876641  147 89999999999988766653   4553                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       133 ~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~  212 (382)
T 4eb5_A          133 QKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAALHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIR  212 (382)
T ss_dssp             HHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEEEEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEE
T ss_pred             HHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCEEEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEc
Confidence                                                                                            


Q ss_pred             hhh-hh-----------hccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC
Q psy16707        299 KIL-IR-----------AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT  365 (420)
Q Consensus       299 ~~~-~r-----------~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~  365 (420)
                      ... ++           ...++++..++..+...|      +.+.+.++.++++++++|+.+.+.|+++ |    +....
T Consensus       213 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~  282 (382)
T 4eb5_A          213 KEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAA------EITAMEWREEAERLRRLRDRIIDNVLKIEE----SYLNG  282 (382)
T ss_dssp             TTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTSTT----EEECS
T ss_pred             cccccCceecCCCccccccCCCccHHHHHHHHHHH------HHHHHhHHHHHHHHHHHHHHHHHHHhhCCC----eEEeC
Confidence            110 11           112233333333222222      2334457788899999999999999875 3    44333


Q ss_pred             CC----CceEEe--cCCCHHHH-HHHHHhCCeEEeCC-------------------------C--cEEEcc-cCCCCHHH
Q psy16707        366 DQ----IGMFCY--TGLNATQV-EKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVGY  410 (420)
Q Consensus       366 ~q----~GmF~~--~~l~~~~v-~~Ll~e~~Vy~~p~-------------------------g--Ris~ag-l~~~ni~~  410 (420)
                      ++    .+++.+  .+.+.+.+ +.| .++||++.++                         +  ||+++. .+.+++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~  361 (382)
T 4eb5_A          283 HPEKRLPNNVNVRFSYIEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDR  361 (382)
T ss_dssp             CSSSBCTTEEEEEETTSCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHH
T ss_pred             CcccCCCCEEEEEeCCcCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHH
Confidence            32    345443  24455544 555 5789999763                         2  999874 47889999


Q ss_pred             HHHHHHHHh
Q psy16707        411 LAKAIHAVT  419 (420)
Q Consensus       411 la~AI~~vv  419 (420)
                      +.++|.+++
T Consensus       362 ~~~~l~~~~  370 (382)
T 4eb5_A          362 LLEVLPGVI  370 (382)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998875

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=98.85  E-value=1.7e-08  Score=99.35  Aligned_cols=82  Identities=17%  Similarity=0.255  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---CceEEec----CCCHH-HHHHHHHhCCeEEeCC------C--c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD------G--R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~------g--R  397 (420)
                      ++.++++++++|+.+.+.|+++|    +..+.++   .++|.++    +.+.+ .+++|++++||++.++      +  |
T Consensus       281 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~R  356 (393)
T 2huf_A          281 LPALIARHEDCAKRLYRGLQDAG----FELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFR  356 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEE
Confidence            67788999999999999999886    4444442   3434432    34554 4577877889999874      2  9


Q ss_pred             EEEccc--CCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGV--TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl--~~~ni~~la~AI~~vv  419 (420)
                      |++.+.  +.++++++.++|.+++
T Consensus       357 i~~~~~~~~~e~i~~~~~~l~~~~  380 (393)
T 2huf_A          357 IGLMGQNATTERVDRVLQVFQEAV  380 (393)
T ss_dssp             EECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EEcccCcCCHHHHHHHHHHHHHHH
Confidence            999553  4667999999998875

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=98.82  E-value=2.2e-08  Score=96.82  Aligned_cols=82  Identities=12%  Similarity=0.091  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC-CceEEec----CCCHHHH-HHHHHhCCeEEeCC------C--cE
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-IGMFCYT----GLNATQV-EKLIKEHSVYLTKD------G--RI  398 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q-~GmF~~~----~l~~~~v-~~Ll~e~~Vy~~p~------g--Ri  398 (420)
                      +++.++++++++|+.+.+.|++.|    +....++ .|.|.++    +.+.+++ ++| .++||++.++      +  ||
T Consensus       249 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRi  323 (352)
T 1iug_A          249 RLEEHLALKAWQNALLYGVGEEGG----LRPVPKRFSPAVAAFYLPEGVPYARVKEAF-AQRGAVIAGGQGPLKGKVFRL  323 (352)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSBCTTCEEEECCTTCCHHHHHHHH-HTTTEECEECCGGGTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCC----CcccccccCCeEEEEEcCCCCCHHHHHHHH-HHCCEEEEeCCCccCCCEEEE
Confidence            367788999999999999999876    5545443 5666654    3455544 566 5679999864      2  99


Q ss_pred             EEccc-CCCCHHHHHHHHHHHh
Q psy16707        399 SMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~agl-~~~ni~~la~AI~~vv  419 (420)
                      +++.. +.++++++.++|.+++
T Consensus       324 ~~~~~~~~~~i~~~~~~l~~~~  345 (352)
T 1iug_A          324 SLMGAYDRYEALGVAGMFREVL  345 (352)
T ss_dssp             CCCSSCCHHHHHHHHHHHHHHH
T ss_pred             EccccCCHHHHHHHHHHHHHHH
Confidence            99865 4788999999998875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=98.81  E-value=1.3e-07  Score=94.45  Aligned_cols=78  Identities=12%  Similarity=0.130  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeC-------CC----cE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTK-------DG----RI  398 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p-------~g----Ri  398 (420)
                      +.++++++++|+.+.+.|+++|    |...  ..|+|.|+.++    . +.++.|+ +.||++.|       .+    ||
T Consensus       307 ~~~~~~~~~~~~~l~~~L~~~g----~~~~--~~~~~~~~~~~~~~~~~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi  379 (409)
T 3kki_A          307 DNRRQHLDRMARKLRIGLSQLG----LTIR--SESQIIGLETGDERNTEKVRDYLE-SNGVFGSVFCRPATSKNKNIIRL  379 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT----CCCC--CSSSEEEEEEESHHHHHHHHHHHH-HTTEECEEECTTSSCTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CccC--CCCCEEEEEeCCHHHHHHHHHHHH-HCCceEeeeCCCCcCCCCcEEEE
Confidence            5677899999999999999987    5433  46777765332    2 3456775 45999943       22    89


Q ss_pred             EEcc-cCCCCHHHHHHHHHHHh
Q psy16707        399 SMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +++. .+++.|+++.++|.+++
T Consensus       380 ~~~~~~t~e~i~~~~~~l~~~l  401 (409)
T 3kki_A          380 SLNSDVNDEQIAKIIEVCSDAV  401 (409)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHH
T ss_pred             EccCCCCHHHHHHHHHHHHHHH
Confidence            9874 47789999999998875

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=98.79  E-value=2.3e-08  Score=98.07  Aligned_cols=80  Identities=19%  Similarity=0.218  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CCCCCCccc---CCCCceEEec---CCCHH-HHHHHHHhCCeEEeCCC-----cEEE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKE-GSNKPWNHI---TDQIGMFCYT---GLNAT-QVEKLIKEHSVYLTKDG-----RISM  400 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i---~~q~GmF~~~---~l~~~-~v~~Ll~e~~Vy~~p~g-----Ris~  400 (420)
                      ++.++++++++|+.+.+.|+++ |    |..+   ..+.++|.|.   +.+.+ .+++| .++||++.++.     ||++
T Consensus       295 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~iRis~  369 (390)
T 1elu_A          295 AEERYQAICQRSEFLWRGLNQLPH----VHCLATSAPQAGLVSFTVDSPLGHRAIVQKL-EEQRIYLRTIADPDCIRACC  369 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTT----EEESCSSCCSSSEEEEEECSSSCHHHHHHHH-HHTTEECEEETTTTEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC----cEEecCccccccEEEEEcCCCCCHHHHHHHH-HHCCEEEEecCCCCeEEEec
Confidence            7778899999999999999986 4    5544   2356666652   33454 45666 68899998753     9998


Q ss_pred             -cccCCCCHHHHHHHHHHH
Q psy16707        401 -AGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       401 -agl~~~ni~~la~AI~~v  418 (420)
                       ...+.++++++.++|.++
T Consensus       370 ~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          370 HYITDEEEINHLLARLADF  388 (390)
T ss_dssp             CTTCCHHHHHHHHHHHTTC
T ss_pred             ccCCCHHHHHHHHHHHHhh
Confidence             347888999999998764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=98.77  E-value=1.9e-07  Score=90.62  Aligned_cols=86  Identities=14%  Similarity=0.152  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC----ceEEe--cCCCHHHHHHHHHhCCeEEeCC---------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY--TGLNATQVEKLIKEHSVYLTKD---------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~----GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~---------  395 (420)
                      .+.++.++++++++|+.+.+.|+++.  + +....++.    +++.+  .+.+.+.+...++++||++.++         
T Consensus       251 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~  327 (382)
T 4hvk_A          251 AMEWREEAERLRRLRDRIIDNVLKIE--E-SYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQ  327 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTST--T-EEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------C
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCc
Confidence            35667778999999999999998752  1 44333332    23333  3556666645557889999864         


Q ss_pred             ----------------C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 ----------------G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----------------g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                                      +  ||++... +.+.++++.++|++++
T Consensus       328 ~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~  370 (382)
T 4hvk_A          328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVI  370 (382)
T ss_dssp             CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence                            2  8998743 5678999999998875

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=98.76  E-value=8.9e-08  Score=94.12  Aligned_cols=83  Identities=13%  Similarity=0.223  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC--CCceEEec--CCCHHHHHHHHHhCCeEEeCC------------
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD--QIGMFCYT--GLNATQVEKLIKEHSVYLTKD------------  395 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~--q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~------------  395 (420)
                      .++.++++++++++.+.+.|+++ |    +..+.+  +.++|.|.  +.+.+.+...+.++||++.|+            
T Consensus       298 ~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g  373 (406)
T 1kmj_A          298 GLNNIAEYEQNLMHYALSQLESVPD----LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN  373 (406)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSTT----EEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCC----eEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcC
Confidence            35567789999999999999886 4    555555  67777763  335555545557889999752            


Q ss_pred             --C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                        +  ||+++.. ++++++++.++|.+++
T Consensus       374 ~~~~iRis~~~~~t~~~i~~~~~~l~~~~  402 (406)
T 1kmj_A          374 VPAMCRASLAMYNTHEEVDRLVTGLQRIH  402 (406)
T ss_dssp             CSCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeecCCCHHHHHHHHHHHHHHH
Confidence              2  9999865 7788999999998875

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=98.75  E-value=6.8e-08  Score=95.10  Aligned_cols=210  Identities=14%  Similarity=0.147  Sum_probs=134.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CC---CCCC--CCCCCCHHHHHHHHHHHcCCCCccccCCceeee
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NL---DKEY--APIIGAPDFGKLAAQLAYGEDCPQLKDNLISIV  232 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~---~~~Y--~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~  232 (420)
                      +...||++.|.|   -| .++++.|.+|......+ ..   ...|  .+..+..++++++++++ |.+      + .   
T Consensus        38 g~~~id~~~~~~---~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~------~-~---  102 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LG-LSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL-GYS------R-A---  102 (384)
T ss_dssp             TEEEEECSCCCT---TS-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH-TCS------E-E---
T ss_pred             CceEEEeeccCc---cC-CCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh-CCC------c-E---
Confidence            346799999963   12 24566677776665433 11   1223  45678899999999987 431      1 1   


Q ss_pred             cccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------
Q psy16707        233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------  298 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------  298 (420)
                                         +.+.+||.++..++..+  ..| ||.|++++|+|+.+...++..|++              
T Consensus       103 -------------------i~~~sGt~a~~~~~~~~--~~~-gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~  160 (384)
T 1bs0_A          103 -------------------LLFISGFAANQAVIAAM--MAK-EDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLAR  160 (384)
T ss_dssp             -------------------EEESCHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHH
T ss_pred             -------------------EEeCCcHHHHHHHHHHh--CCC-CcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence                               45666799998877654  457 899999999999999888877764              


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       161 ~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~  240 (384)
T 1bs0_A          161 LLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGV  240 (384)
T ss_dssp             HHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSS
T ss_pred             HHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhc
Confidence                                                                                            


Q ss_pred             ------------hhhhh--hcc--C-CCchHHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 ------------KILIR--AFY--S-SPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 ------------~~~~r--~~~--s-~pp~~ga~iv~~IL~dp~L~~~w~~--el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                  ..+.+  ..|  + +++...+.++...|       ++.+  .++.++++++++|+.+.+.|++.|   
T Consensus       241 ~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al-------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---  310 (384)
T 1bs0_A          241 SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASL-------AVIRSDEGDARREKLAALITRFRAGVQDLP---  310 (384)
T ss_dssp             CCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH-------HHHHSHHHHHHHHHHHHHHHHHHHHHTTSS---
T ss_pred             cCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHhcC---
Confidence                        00000  011  1 23333333222222       1122  445677899999999999999886   


Q ss_pred             CCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC---------C--cEEEccc-CCCCHHHHHHHHHHH
Q psy16707        360 PWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD---------G--RISMAGV-TSKNVGYLAKAIHAV  418 (420)
Q Consensus       360 ~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~---------g--Ris~agl-~~~ni~~la~AI~~v  418 (420)
                       |+..+ ..|.|+|+.++    . +.+++|+ +.||++.|+         +  ||+++.. +.++++++.++|.++
T Consensus       311 -~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          311 -FTLAD-SCSAIQPLIVGDNSRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             -CEECS-CCSSBCCEEEESHHHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             -CcccC-CCCCEEEEEeCCHHHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence             55443 55666654332    3 3446665 569999763         2  9998743 788999999998875

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=98.74  E-value=1.8e-07  Score=94.37  Aligned_cols=212  Identities=16%  Similarity=0.129  Sum_probs=134.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHcc-C-CCCCCCCCCCC----HHHHHHHHHHHcCCCCccccCCceeee
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-N-LDKEYAPIIGA----PDFGKLAAQLAYGEDCPQLKDNLISIV  232 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~-~~~~Y~p~~G~----~~fr~a~~~~~~g~~~~~~~~~~i~~~  232 (420)
                      +.+.||++.|.|.   | ....+.|.+|......+ . ....|.+..|.    .++++++++++ |.+       .+   
T Consensus        63 g~~~id~~~~~~l---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~-g~~-------~~---  127 (427)
T 2w8t_A           63 GKDTILLGTYNYM---G-MTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY-GTT-------GA---  127 (427)
T ss_dssp             TEEEEECSCCCTT---C-GGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-TCS-------EE---
T ss_pred             CceEEEEECcccc---c-CCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-CCC-------ce---
Confidence            4567899999642   3 23455566665554432 1 23345556665    78899998877 432       11   


Q ss_pred             cccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc--------------
Q psy16707        233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE--------------  298 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------------  298 (420)
                                         +.+.+|+.|+..++..+  +.| ||.|++++|+|+++...++..|++              
T Consensus       128 -------------------i~~~sGs~a~~~al~~l--~~~-gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~  185 (427)
T 2w8t_A          128 -------------------IVFSTGYMANLGIISTL--AGK-GEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDK  185 (427)
T ss_dssp             -------------------EEESCHHHHHHHHHHHH--SCT-TCEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHH
T ss_pred             -------------------EEecCcHHHHHHHHHHh--cCC-CCEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHH
Confidence                               55778888888776644  457 899999999999999888777654              


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       186 ~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~  265 (427)
T 2w8t_A          186 RLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKS  265 (427)
T ss_dssp             HHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSST
T ss_pred             HHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhh
Confidence                                                                                            


Q ss_pred             ---------------hhh---hhh-ccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy16707        299 ---------------KIL---IRA-FYS-SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN  358 (420)
Q Consensus       299 ---------------~~~---~r~-~~s-~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~  358 (420)
                                     ..+   .+. .++ +++...+..+...|.       +.++++.++++++++++.+.+.|++.|  
T Consensus       266 ~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~-------~~~~~~~~~~~~~~~~~~l~~~L~~~g--  336 (427)
T 2w8t_A          266 VGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIR-------KLMTAHEKRERLWSNARALHGGLKAMG--  336 (427)
T ss_dssp             TCSCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH-------HHTSCHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hccCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHH-------HHhcCHHHHHHHHHHHHHHHHHHHHcC--
Confidence                           111   011 112 222222222222221       112346677899999999999999886  


Q ss_pred             CCCcccCCC-CceEEecCCC-----HHHHHHHHHhCCeEEeCC-----------CcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        359 KPWNHITDQ-IGMFCYTGLN-----ATQVEKLIKEHSVYLTKD-----------GRISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       359 ~~w~~i~~q-~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~-----------gRis~ag-l~~~ni~~la~AI~~vv  419 (420)
                        |..+.+. .|.|.++-++     .+.+++|+ +.||++.|+           .||+++. .+.+.++++.++|.+++
T Consensus       337 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l  412 (427)
T 2w8t_A          337 --FRLGTETCDSAIVAVMLEDQEQAAMMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAG  412 (427)
T ss_dssp             --CEESCSSCCSSEEEEEESSHHHHHHHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             --CcccCCCCCCCEEEEEECCHHHHHHHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence              5544233 5666665332     24456775 459999763           2899886 47889999999998875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=98.73  E-value=3.1e-08  Score=96.55  Aligned_cols=101  Identities=11%  Similarity=-0.076  Sum_probs=66.6

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCC--------CCCCCCCCCCHHHHHH-HHHHHcCCCCccccCCce
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL--------DKEYAPIIGAPDFGKL-AAQLAYGEDCPQLKDNLI  229 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~--------~~~Y~p~~G~~~fr~a-~~~~~~g~~~~~~~~~~i  229 (420)
                      .++.|+|..|.     +..++++.|.+|.........        ...|.+..+.++++++ +++++ |.+       .|
T Consensus         6 ~~~~i~ld~~~-----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~-~~~-------~v   72 (371)
T 2e7j_A            6 TKDFINIDPLQ-----TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL-GCD-------VA   72 (371)
T ss_dssp             --CCEECCHHH-----HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT-TSS-------EE
T ss_pred             CCCcEEecccc-----cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc-CCC-------EE
Confidence            45678888875     233567788877776543311        1245678899999999 99875 431       23


Q ss_pred             eeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        230 SIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                                            +.|.|||.|+.+++..+  +.| ||+|++++|+|+.+...++..|+
T Consensus        73 ----------------------~~~~g~t~a~~~~~~~~--~~~-gd~vl~~~~~~~~~~~~~~~~g~  115 (371)
T 2e7j_A           73 ----------------------RVTNGAREAKFAVMHSL--AKK-DAWVVMDENCHYSSYVAAERAGL  115 (371)
T ss_dssp             ----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHHTTC
T ss_pred             ----------------------EEeCChHHHHHHHHHHH--hCC-CCEEEEccCcchHHHHHHHHcCC
Confidence                                  67999999999998765  457 89999999999988766655443

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=98.69  E-value=1.4e-07  Score=91.29  Aligned_cols=82  Identities=20%  Similarity=0.236  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEecC------CCHHHH-HHHHHhCCeEEeCCC-------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTG------LNATQV-EKLIKEHSVYLTKDG-------  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~~~------l~~~~v-~~Ll~e~~Vy~~p~g-------  396 (420)
                      ++.++++++++|+.+.+.|++.|    +..+.+   ..|+|.|+.      .+.+.+ +.| .++||++.++.       
T Consensus       264 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~i  338 (366)
T 1m32_A          264 VAARHQRYQQNQRSLVAGMRALG----FNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRL-KEQGFVIYPGKVSQSDCF  338 (366)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHH-HHTTEECEECCCSSSCEE
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCC----CeeccCchhcCceEEEEEcCccCCCCHHHHHHHH-HHCCEEEECCcCCCCCEE
Confidence            67788999999999999999876    444433   367666542      344544 566 46699998751       


Q ss_pred             cEEEccc-CCCCHHHHHHHHHHHhC
Q psy16707        397 RISMAGV-TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       397 Ris~agl-~~~ni~~la~AI~~vv~  420 (420)
                      ||+++.. +.++++++.++|.++++
T Consensus       339 Ri~~~~~~~~~~i~~~~~~l~~~~~  363 (366)
T 1m32_A          339 RIGNIGEVYAADITALLTAIRTAMY  363 (366)
T ss_dssp             EEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred             EEecCCCCCHHHHHHHHHHHHHHHH
Confidence            9999876 57889999999998753

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=98.69  E-value=1.5e-07  Score=92.99  Aligned_cols=86  Identities=19%  Similarity=0.185  Sum_probs=62.1

Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---CceEEec----CCCHH-HHHHHHHhCCeEEeCC-----
Q psy16707        330 WLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMFCYT----GLNAT-QVEKLIKEHSVYLTKD-----  395 (420)
Q Consensus       330 w~~e-l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~GmF~~~----~l~~~-~v~~Ll~e~~Vy~~p~-----  395 (420)
                      +.++ ++.++++++++|+.+.+.|++.|    +..+.++   .+.|.+.    +.+.+ .++.|++++||++.++     
T Consensus       283 ~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~  358 (411)
T 3nnk_A          283 ILQEGLDYGIARHKLHGDALVKGIQAMG----LETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLH  358 (411)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGT
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHcC----CEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCC
Confidence            3444 77888999999999999999987    4444333   2455543    34554 4577888889999874     


Q ss_pred             -C--cEEEcc-c-CCCCHHHHHHHHHHHh
Q psy16707        396 -G--RISMAG-V-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -g--Ris~ag-l-~~~ni~~la~AI~~vv  419 (420)
                       +  ||++.+ . +.+.++++.++|++++
T Consensus       359 ~~~iRi~~~~~~~~~~~i~~~~~~l~~~l  387 (411)
T 3nnk_A          359 GKVWRIGTMGYNARKDCVMTTLSALEAVL  387 (411)
T ss_dssp             TTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCccCcCCHHHHHHHHHHHHHHH
Confidence             2  999833 3 5788999999998875

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=98.69  E-value=1.4e-06  Score=84.84  Aligned_cols=84  Identities=11%  Similarity=0.267  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-CHHHH-HHHHHhCCeEEeCCC-----cEEEcc-c
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQV-EKLIKEHSVYLTKDG-----RISMAG-V  403 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~~~~v-~~Ll~e~~Vy~~p~g-----Ris~ag-l  403 (420)
                      ..++.+.++++++|+.+.+.|++.|    +..+.++.+.|.+..+ +.+.+ +.| .++||++.++.     ||+++. .
T Consensus       305 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~Ri~~~~~~  379 (397)
T 3f9t_A          305 EGQRKIVNECMENTLYLYKKLKENN----FKPVIEPILNIVAIEDEDYKEVCKKL-RDRGIYVSVCNCVKALRIVVMPHI  379 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEEEEECTTHHHHHHHH-HHTTCBCEECSSSSEEEEECCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC----CEEEcCCCccEEEEEeCCHHHHHHHH-HhCCeEEeccCCCCEEEEEEcCCC
Confidence            4556677888999999999999986    4544444455554433 34444 555 56699998864     999984 4


Q ss_pred             CCCCHHHHHHHHHHHhC
Q psy16707        404 TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv~  420 (420)
                      +.+.++++.++|.++++
T Consensus       380 ~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          380 KREHIDNFIEILNSIKR  396 (397)
T ss_dssp             CHHHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHhhC
Confidence            77899999999998763

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=98.68  E-value=1.1e-07  Score=93.22  Aligned_cols=78  Identities=12%  Similarity=0.181  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCC
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKDG----RISMA-GVTSKN  407 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~n  407 (420)
                      .+.++++++|+.+.+.|++++.    . ..+..|+|.|+.++   .+.++.|+ ++||.+.|++    ||++. ..+.++
T Consensus       290 ~~~~~~~~~~~~l~~~L~~~~~----~-~~~~~g~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~iRi~~~~~~~~~~  363 (375)
T 2eh6_A          290 KLLPHVREVGNYFKEKLKELGK----G-KVKGRGLMLGLELERECKDYVLKAL-EKGLLINCTAGKVLRFLPPLIIQKEH  363 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTS----S-EEEEETTEEEEECSSCCHHHHHHHH-HTTEECEEETTTEEEECCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc----C-CceEEEEEEEEEEcCcHHHHHHHHH-HCCCEEecCCCCEEEEECCCCCCHHH
Confidence            5668888999999999998762    2 23456788876443   45567775 6899998743    88876 578889


Q ss_pred             HHHHHHHHHHHh
Q psy16707        408 VGYLAKAIHAVT  419 (420)
Q Consensus       408 i~~la~AI~~vv  419 (420)
                      ++++.++|.+++
T Consensus       364 i~~~~~~l~~~l  375 (375)
T 2eh6_A          364 IDRAISVLREIL  375 (375)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999998763

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=98.68  E-value=2.4e-07  Score=91.69  Aligned_cols=82  Identities=16%  Similarity=0.268  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC---ceEEec----CCCH-HHHHHHHHhCCeEEeCC------C--c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI---GMFCYT----GLNA-TQVEKLIKEHSVYLTKD------G--R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~---GmF~~~----~l~~-~~v~~Ll~e~~Vy~~p~------g--R  397 (420)
                      ++.++++++++|+.+.+.|++.|    +....++.   |.+.+.    +.+. +.++.|++++||++.++      +  |
T Consensus       288 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iR  363 (416)
T 3isl_A          288 LETRFERHRHHEAALAAGIKAMG----LRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWR  363 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEE
Confidence            77888999999999999999976    45444432   444443    3444 45578877889999864      1  9


Q ss_pred             EEEcc-cCCCC-HHHHHHHHHHHh
Q psy16707        398 ISMAG-VTSKN-VGYLAKAIHAVT  419 (420)
Q Consensus       398 is~ag-l~~~n-i~~la~AI~~vv  419 (420)
                      |++.+ .+.+. ++++.++|.+++
T Consensus       364 i~~~~~~~~~e~i~~~~~~l~~~~  387 (416)
T 3isl_A          364 IGTMGYSCRKENVLFVLAGLEAVL  387 (416)
T ss_dssp             EECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EecccCCCcHHHHHHHHHHHHHHH
Confidence            99844 46667 999999998875

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=98.68  E-value=6.6e-08  Score=95.76  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-----------Cc
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------GR  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-----------gR  397 (420)
                      .+.++++++++|+.+.+.|++.|    +..+ +..|.|+|+.++    . +.++.|+ ++||++.++           -|
T Consensus       298 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iR  371 (401)
T 1fc4_A          298 GSELRDRLWANARQFREQMSAAG----FTLA-GADHAIIPVMLGDAVVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIR  371 (401)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT----CCBC-CSSSSEEEEEEECHHHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcC----Cccc-CCCCCEEEEEcCChHHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEE
Confidence            35677899999999999999886    4544 467777775442    2 3446664 569999763           28


Q ss_pred             EEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        398 ISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~ag-l~~~ni~~la~AI~~vv  419 (420)
                      |+++. .+.++++++.++|.+++
T Consensus       372 i~~~~~~~~~~i~~~~~~l~~~~  394 (401)
T 1fc4_A          372 TQMSAAHTPEQITRAVEAFTRIG  394 (401)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHH
Confidence            99873 58889999999998875

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=98.68  E-value=7.7e-08  Score=96.13  Aligned_cols=114  Identities=19%  Similarity=0.213  Sum_probs=99.7

Q ss_pred             HhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHH
Q psy16707         10 LIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NAT   88 (420)
Q Consensus        10 i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~   88 (420)
                      ..+..|++++..+..++..+|.++++.+.|.++++.++++++..|+.|.+.|++.+    |..+..+.|||.+..+ +.+
T Consensus       294 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~  369 (418)
T 3rq1_A          294 TSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG----LPMLPYRGGFFITIPTDSAN  369 (418)
T ss_dssp             HHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCCSSSEEEEECTTHH
T ss_pred             HHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCceEEEEcCCCCHH
Confidence            35667899999999999999999999999999999999999999999999998873    6677889999998755 566


Q ss_pred             HHHHHHHhcceEEcCCC---ceecccCCcCCHHHHHHHHHhh
Q psy16707         89 QVEKLIKEHSVYLTKDG---RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        89 qv~~L~~~~~IY~~~~G---Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++..+-++++|++.+.+   ||++++++..+++.++++|.++
T Consensus       370 ~~~~~l~~~gi~v~~g~~~iRis~~~~~~~~i~~~~~~l~~~  411 (418)
T 3rq1_A          370 AICEELKKEHIYVIALANGIRIAACGIPKCQMTGLAEKIYNA  411 (418)
T ss_dssp             HHHHHHHHTTEECEECSSEEEEEGGGSCHHHHTTHHHHHHHH
T ss_pred             HHHHHHHhCCEEEecCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence            66666688999998866   9999999999999999998876

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=98.66  E-value=2.1e-07  Score=91.92  Aligned_cols=84  Identities=17%  Similarity=0.285  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCceEEecCC-----CHHHHHHHHHhCCeEEeCC----------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGL-----NATQVEKLIKEHSVYLTKD----------  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p~----------  395 (420)
                      +.++.++++++++++.+.+.|++.|    +..+. +..|.|.|+.+     +.+.+...+.++||++.++          
T Consensus       277 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~  352 (407)
T 2dkj_A          277 PEFKEYSRLVVENAKRLAEELARRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPR  352 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCC----ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcccccccc
Confidence            4556777999999999999999886    55443 35677777533     4555544447899999763          


Q ss_pred             ----CcEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707        396 ----GRISMAG-----VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----gRis~ag-----l~~~ni~~la~AI~~vv  419 (420)
                          -||+++.     .+.+.++++.++|.+++
T Consensus       353 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~  385 (407)
T 2dkj_A          353 VTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL  385 (407)
T ss_dssp             TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHH
T ss_pred             CCCceeeecccccccCCCHHHHHHHHHHHHHHH
Confidence                1999975     78999999999998875

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=98.66  E-value=3e-07  Score=91.04  Aligned_cols=86  Identities=16%  Similarity=0.224  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEe--cCCCHHHH-HHHHHhCCeEEeCC-------
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCY--TGLNATQV-EKLIKEHSVYLTKD-------  395 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~--~~l~~~~v-~~Ll~e~~Vy~~p~-------  395 (420)
                      +|.+.++.++++++++|+.+.+.|+++.  + +....+   ..+++.+  .+.+.+.+ +.| .++||++.++       
T Consensus       296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gi~v~~g~~~~~~~  371 (406)
T 3cai_A          296 RLAVSMQSADAYLNRVFDYLMVSLRSLP--L-VMLIGRPEAQIPVVSFAVHKVPADRVVQRL-ADNGILAIANTGSRVLD  371 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCT--T-EEECCCCSSBCSEEEEEETTBCHHHHHHHH-HHTTEECEECCSCHHHH
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEcCCccccCCEEEEEECCcCHHHHHHHH-HHCCcEEecCChHHHHH
Confidence            3444678888999999999999999852  1 443333   2555443  24455555 555 6789999753       


Q ss_pred             --------C--cEEEccc-CCCCHHHHHHHHHHH
Q psy16707        396 --------G--RISMAGV-TSKNVGYLAKAIHAV  418 (420)
Q Consensus       396 --------g--Ris~agl-~~~ni~~la~AI~~v  418 (420)
                              +  ||++... +.++++++.++|.++
T Consensus       372 ~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          372 VLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             HHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             HcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence                    2  9998864 467899999998864

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=98.64  E-value=5.6e-07  Score=89.51  Aligned_cols=83  Identities=12%  Similarity=0.188  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCC----ceEEe--cCCCHHHHHHHHHhCCeEEeCC--------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQI----GMFCY--TGLNATQVEKLIKEHSVYLTKD--------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~----GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~--------  395 (420)
                      .++++.++++++++|+.+.+.|+++ |    +....++.    +++.+  .+.+.+.+...+.+  |++.++        
T Consensus       279 ~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~  352 (423)
T 3lvm_A          279 KEEMATEMERLRGLRNRLWNGIKDIEE----VYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASL  352 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSTT----EEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC----EEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCc
Confidence            3447888899999999999999876 4    44444432    34432  35566655444445  877664        


Q ss_pred             -----------------C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 -----------------G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----------------g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                                       +  ||+++.. +.+++++++++|.+++
T Consensus       353 ~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~  396 (423)
T 3lvm_A          353 EPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI  396 (423)
T ss_dssp             CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence                             2  9998844 5588999999998875

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=98.64  E-value=3e-07  Score=91.20  Aligned_cols=80  Identities=18%  Similarity=0.172  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC----H-HHHHHHHHhCCeEEeCC-------C----cE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-------G----RI  398 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~----~-~~v~~Ll~e~~Vy~~p~-------g----Ri  398 (420)
                      +.++++++++++.+.+.|++.|    +..+.++.+ |.|+.++    . +.++.|++++||++.|+       |    ||
T Consensus       301 ~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRi  375 (401)
T 2bwn_A          301 QKLRDAQQMHAKVLKMRLKALG----MPIIDHGSH-IVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRF  375 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSS-CEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC----CcccCCCCC-eEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEE
Confidence            6677899999999999999886    555555555 5554332    2 34467767899999642       2    89


Q ss_pred             EEcc-cCCCCHHHHHHHHHHHh
Q psy16707        399 SMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +++. .+.+.++++.++|.+++
T Consensus       376 s~~~~~t~~~i~~~~~~l~~~~  397 (401)
T 2bwn_A          376 TPSPVHDLKQIDGLVHAMDLLW  397 (401)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHHC
T ss_pred             EeeCCCCHHHHHHHHHHHHHHH
Confidence            9874 47788999999998875

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=98.63  E-value=2.7e-07  Score=91.29  Aligned_cols=99  Identities=15%  Similarity=0.093  Sum_probs=69.0

Q ss_pred             CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCC-CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        158 TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA-PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       158 ~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~-p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      +-+++++++.|.       |..++.|.++.......   ..|. +..|..+|++++++++ |.+       .+       
T Consensus        20 ~~~~~~~l~~~~-------p~~~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~-~~~-------~~-------   74 (391)
T 3dr4_A           20 HMSDLPRISVAA-------PRLDGNERDYVLECMDT---TWISSVGRFIVEFEKAFADYC-GVK-------HA-------   74 (391)
T ss_dssp             --------CCCC-------CCCCSSHHHHHHHHHHH---TCCSSCSHHHHHHHHHHHHHH-TCS-------EE-------
T ss_pred             hcCCCceeccCC-------CCCCHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHh-CCC-------cE-------
Confidence            346788998885       34456677666665542   3566 7789999999999987 322       12       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                     +.+.|||.|+.+++..+ .+.| ||+|++++|+|+.+...++..|++
T Consensus        75 ---------------i~~~~gt~al~~~l~~~-~~~~-gd~vl~~~~~~~~~~~~~~~~g~~  119 (391)
T 3dr4_A           75 ---------------IACNNGTTALHLALVAM-GIGP-GDEVIVPSLTYIASANSVTYCGAT  119 (391)
T ss_dssp             ---------------EEESSHHHHHHHHHHHH-TCCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             ---------------EEeCCHHHHHHHHHHHc-CCCC-cCEEEECCCchHHHHHHHHHCCCE
Confidence                           56899999999988755 2457 899999999999999999888775

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=98.61  E-value=3.7e-07  Score=90.34  Aligned_cols=83  Identities=19%  Similarity=0.229  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCC
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKDG----RISMA-GVTSKN  407 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~n  407 (420)
                      .+.++++++|+.+.+.|++++.+  +....+..|.|+|+.+   ..+.++.|++++||.+.|++    ||+++ ..+.++
T Consensus       305 ~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~~  382 (395)
T 1vef_A          305 RLWERAAELGPWFMEKLRAIPSP--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKED  382 (395)
T ss_dssp             TTHHHHHHHHHHHHHHHHTSCCT--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcC--ceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHH
Confidence            46688899999999999987642  2111335677776543   34566778658899999864    88765 467789


Q ss_pred             HHHHHHHHHHHhC
Q psy16707        408 VGYLAKAIHAVTK  420 (420)
Q Consensus       408 i~~la~AI~~vv~  420 (420)
                      ++++.++|.++++
T Consensus       383 i~~~~~~l~~~l~  395 (395)
T 1vef_A          383 LERVVEAVRAVLA  395 (395)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998764

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=98.61  E-value=1.7e-07  Score=91.46  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----CceEEec---CCCHHHH-HHHHHhCCeEEeCCC-------cE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT---GLNATQV-EKLIKEHSVYLTKDG-------RI  398 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~GmF~~~---~l~~~~v-~~Ll~e~~Vy~~p~g-------Ri  398 (420)
                      ++.++++++++++.+.+.|++.|    +..+.++    .|.|.++   +.+.+.+ +.| .++||++.++.       ||
T Consensus       264 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~iRi  338 (384)
T 3zrp_A          264 IENRIKRHTMVASAIRAGLEALG----LEIVARRPESYSNTVTGVILKVADPQKVLAGT-VNEGVEFAPGVHPAFKYFRI  338 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CCBSCSSGGGBCSSEEEEECSSSCHHHHHHHH-HTTTCCCEECCCTTCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC----CeEccCcccccCccEEEEECCCCCHHHHHHHH-HHCCEEEecCCCCCcCEEEE
Confidence            67888999999999999999886    5555544    4556543   3345444 555 56699999875       99


Q ss_pred             EEcc-cCCCCHHHHHHHHHHHh
Q psy16707        399 SMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~ag-l~~~ni~~la~AI~~vv  419 (420)
                      ++.. .+.++++++.++|++++
T Consensus       339 ~~~~~~~~e~i~~~~~~l~~~l  360 (384)
T 3zrp_A          339 GHMGWVTPNDAIIAISVIERTL  360 (384)
T ss_dssp             ECCSSCCHHHHHHHHHHHHHHH
T ss_pred             eccccCCHHHHHHHHHHHHHHH
Confidence            9764 46688999999998875

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=98.53  E-value=2.3e-07  Score=89.16  Aligned_cols=81  Identities=14%  Similarity=0.189  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC--CceEEec----CCCHHHH-HHHHHhCCeEEeCC--------CcE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ--IGMFCYT----GLNATQV-EKLIKEHSVYLTKD--------GRI  398 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q--~GmF~~~----~l~~~~v-~~Ll~e~~Vy~~p~--------gRi  398 (420)
                      ++.++++++++|+.+.+.|++.|    +..+.++  .+++.++    +.+.+.+ +.| .++||++.++        -||
T Consensus       253 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRi  327 (353)
T 2yrr_A          253 VAARERRAREVYAWVLEELKARG----FRPYPKASPLPTVLVVRPPEGVDADRLVRAL-YAEGVAVAGGIGPTRGQVLRL  327 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CEESCSSSBCTTEEEEECCTTCCHHHHHHHH-HHTTEECEECCGGGTTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC----CccccCccCCCeEEEEECCCCCCHHHHHHHH-HHCCEEEeCCccccCCCeEEE
Confidence            67788999999999999999875    5544443  4544433    3455555 555 5669999863        299


Q ss_pred             EE-cccCCCCHH-HHHHHHHHHh
Q psy16707        399 SM-AGVTSKNVG-YLAKAIHAVT  419 (420)
Q Consensus       399 s~-agl~~~ni~-~la~AI~~vv  419 (420)
                      ++ ...+.++++ ++.++|.+++
T Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~l  350 (353)
T 2yrr_A          328 GLMGEGARREAYQAFLKALDRAL  350 (353)
T ss_dssp             ECSGGGSCHHHHHHHHHHHHHHH
T ss_pred             ecCccCCHHHHHHHHHHHHHHHH
Confidence            98 557888999 9999999875

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=98.50  E-value=8.6e-07  Score=92.00  Aligned_cols=112  Identities=12%  Similarity=0.204  Sum_probs=94.5

Q ss_pred             hccCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CC
Q psy16707         12 RAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GL   85 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL   85 (420)
                      +..+++||..|..++..+|+++    .++++|.++++.++++++..|..|.+.|++.  + .|..+..|.|||.+.  .+
T Consensus       347 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--~-g~~~~~~~g~~~~~~~~~l  423 (500)
T 3tcm_A          347 ASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL--E-GITCNEAEGAMYVFPQICL  423 (500)
T ss_dssp             HHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--T-TEECCCCCBTTEECCEECC
T ss_pred             HhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C-CcEEecCCeEEEEeeeecC
Confidence            4578999999999999999954    5889999999999999999999999999876  3 388888899999995  44


Q ss_pred             CHHH---------------HHHHHHhcceEEcC-------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 NATQ---------------VEKLIKEHSVYLTK-------DG----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~q---------------v~~L~~~~~IY~~~-------~G----Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .+..               +..|.++++||+.+       .|    ||+++ .+..+++.++++|.++
T Consensus       424 p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~  490 (500)
T 3tcm_A          424 PQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVF  490 (500)
T ss_dssp             CHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHH
T ss_pred             chhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHH
Confidence            4332               45677889999973       45    99999 8999999999998876

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=98.49  E-value=6.3e-07  Score=87.63  Aligned_cols=82  Identities=21%  Similarity=0.279  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC----CceEEec----CCCH-HHHHHHHHhCCeEEeCCC--------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCYT----GLNA-TQVEKLIKEHSVYLTKDG--------  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q----~GmF~~~----~l~~-~~v~~Ll~e~~Vy~~p~g--------  396 (420)
                      ++.+.++++++|+.+.+.|++.|    +..+.+.    .+.+.+.    +.+. +..++|++++||++.++.        
T Consensus       285 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i  360 (393)
T 3kgw_A          285 LENCWRRHREATAHLHKHLQEMG----LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVL  360 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEE
Confidence            67788999999999999999986    4444222    2455443    3344 455788777899999741        


Q ss_pred             cEEEccc--CCCCHHHHHHHHHHHh
Q psy16707        397 RISMAGV--TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 Ris~agl--~~~ni~~la~AI~~vv  419 (420)
                      ||++.+.  +.++++++.++|.+++
T Consensus       361 Ri~~~~~~~~~~~i~~~~~~l~~~l  385 (393)
T 3kgw_A          361 RIGLLGYNATTENVDRVAEALREAL  385 (393)
T ss_dssp             EEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred             EEEecccCCCHHHHHHHHHHHHHHH
Confidence            9998443  7889999999998875

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=98.48  E-value=2.3e-06  Score=85.91  Aligned_cols=93  Identities=18%  Similarity=0.111  Sum_probs=72.4

Q ss_pred             eecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCC-CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccc
Q psy16707        164 NLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAP-IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLR  242 (420)
Q Consensus       164 nL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p-~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~  242 (420)
                      +|++|.   ++  ++.++.|.++.......   ..|.+ ..|.++|++++++++ |.+       +|             
T Consensus        20 ~l~~~~---p~--~~~p~~~~~a~~~~~~~---~~y~~~~~~~~~l~~~la~~~-~~~-------~v-------------   70 (424)
T 2po3_A           20 PLLVGR---PN--RIDRARLYERLDRALDS---QWLSNGGPLVREFEERVAGLA-GVR-------HA-------------   70 (424)
T ss_dssp             CEETTC---CC--CCCHHHHHHHHHHHHHH---TCCSSSCHHHHHHHHHHHHHH-TSS-------EE-------------
T ss_pred             cccccC---CC--CCChHHHHHHHHHHHhc---CCcccCCHHHHHHHHHHHHHh-CCC-------eE-------------
Confidence            688885   44  34567787777766543   24877 789999999999987 421       23             


Q ss_pred             cccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        243 VGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       243 ~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                               +.|.|||.|+.+++..+.   + ||+|++++|+|+.|...++..|++
T Consensus        71 ---------~~~~ggt~al~~~l~~l~---~-gd~Vlv~~~~~~~~~~~~~~~G~~  113 (424)
T 2po3_A           71 ---------VATCNATAGLQLLAHAAG---L-TGEVIMPSMTFAATPHALRWIGLT  113 (424)
T ss_dssp             ---------EEESCHHHHHHHHHHHHT---C-CSEEEEESSSCTHHHHHHHHTTCE
T ss_pred             ---------EEeCCHHHHHHHHHHHcC---C-CCEEEECCCccHHHHHHHHHcCCE
Confidence                     679999999999987653   6 899999999999999988888764

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=98.46  E-value=2.6e-06  Score=83.99  Aligned_cols=85  Identities=14%  Similarity=0.058  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHH
Q psy16707        181 PSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGS  260 (420)
Q Consensus       181 ~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtga  260 (420)
                      +.|.+|....... ....|.+..+..+|++++++++ |..      +.                       +.+.+||.|
T Consensus        17 ~~~~~a~~~~l~~-~~~~~~~~~~~~~l~~~la~~~-~~~------~~-----------------------i~~~sGt~a   65 (388)
T 1b9h_A           17 DAERNGLVRALEQ-GQWWRMGGDEVNSFEREFAAHH-GAA------HA-----------------------LAVTNGTHA   65 (388)
T ss_dssp             HHHHHHHHHHHHT-SCCBTTTCSHHHHHHHHHHHHT-TCS------EE-----------------------EEESCHHHH
T ss_pred             HHHHHHHHHHHHc-CCeeecCCHHHHHHHHHHHHHh-CCC------eE-----------------------EEeCCHHHH
Confidence            6777777766643 3456888889999999999976 422      11                       334556999


Q ss_pred             HHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       261 l~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+++..+. +.| ||.|++++|+|+.+...++..|++
T Consensus        66 l~~~l~~l~-~~~-gd~Vi~~~~~~~~~~~~~~~~g~~  101 (388)
T 1b9h_A           66 LELALQVMG-VGP-GTEVIVPAFTFISSSQAAQRLGAV  101 (388)
T ss_dssp             HHHHHHHTT-CCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             HHHHHHHcC-CCC-cCEEEECCCccHHHHHHHHHcCCE
Confidence            999887541 457 899999999999999988888764

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=98.44  E-value=1.1e-06  Score=88.45  Aligned_cols=101  Identities=13%  Similarity=0.142  Sum_probs=70.9

Q ss_pred             CceeecccccccCCCC--CCchHHHHHHHHHHHccCCCCCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707        161 NKINLGVGAYRDDQGK--PYVLPSVKQADEIVLNKNLDKEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGI  235 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~--~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~  235 (420)
                      +..++++|.   ||-.  +++.+.++++.+...+....+.|.+ .|.+   +|++++++++ |.+       .+      
T Consensus        19 ~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~-g~~-------~~------   80 (404)
T 1e5e_A           19 KDQFGAAIP---PIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE-KTE-------AC------   80 (404)
T ss_dssp             CCTTCCSSC---CCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH-TCS-------EE------
T ss_pred             CCCCCCcCC---CCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh-CCC-------cE------
Confidence            446788885   5542  2334555555443323335678988 7888   8999999987 321       12      


Q ss_pred             CCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707        236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE  298 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~  298 (420)
                                      +.+.||+.|+.+++..+  +.| ||.|++++|+|+.|..    .++..|++
T Consensus        81 ----------------i~~~~g~~ai~~~~~~l--~~~-gd~Vl~~~~~y~~~~~~~~~~~~~~g~~  128 (404)
T 1e5e_A           81 ----------------VATSSGMGAIAATVLTI--LKA-GDHLISDECLYGCTHALFEHALTKFGIQ  128 (404)
T ss_dssp             ----------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred             ----------------EEeCChHHHHHHHHHHH--hCC-CCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence                            56889999999888644  457 9999999999999888    67777764

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=98.43  E-value=1e-06  Score=86.89  Aligned_cols=83  Identities=19%  Similarity=0.183  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC----ceEEec--CCCHHHH-HHHHHhCCeEEeCC--------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCYT--GLNATQV-EKLIKEHSVYLTKD--------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~----GmF~~~--~l~~~~v-~~Ll~e~~Vy~~p~--------  395 (420)
                      .+.++.++++++++|+.+.+.|+..|    +....++.    +++.+.  +.+.+.+ +.| . +||++.+|        
T Consensus       279 ~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~-~gi~v~~g~~~~~~~~  352 (400)
T 3vax_A          279 EAEHAQWQVAAQDLRSRLLAGLASTS----FQVNGDQDHVVPHILNLSFEDVDAEAFLVTL-K-DLVAVATGSASTSASF  352 (400)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHTTTT----CEECSCTTSBCTTEEEEECTTCCHHHHHHHH-H-HHHHHTTTTEEEEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHHHhhCCCC----EEEeCCcccCCCCEEEEEeCCCCHHHHHHHH-h-cCcEEEecccccCCCC
Confidence            34567788999999999999998323    55555443    344432  4455555 555 5 89988763        


Q ss_pred             -----------------C--cEEE-c-ccCCCCHHHHHHHHHHHh
Q psy16707        396 -----------------G--RISM-A-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----------------g--Ris~-a-gl~~~ni~~la~AI~~vv  419 (420)
                                       +  ||++ . ..+.+.++++.++|.+++
T Consensus       353 ~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~  397 (400)
T 3vax_A          353 TPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK  397 (400)
T ss_dssp             CCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred             CccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence                             3  9998 3 457889999999998875

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=98.42  E-value=3.2e-07  Score=92.52  Aligned_cols=112  Identities=14%  Similarity=0.088  Sum_probs=90.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      +++.+.+. ..+||.++..++..+|.+..  .+|   ++.+++|++.+|+.|.+.|++.  | .|.++..+.|||.++++
T Consensus       291 ~l~~~~~~-~~~~~~~~~~a~~~~L~~~~--~~~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~p~~g~~~~~~l  361 (427)
T 3dyd_A          291 GLVKLSQR-ILGPCTIVQGALKSILCRTP--GEF---YHNTLSFLKSNADLCYGALAAI--P-GLRPVRPSGAMYLMVGI  361 (427)
T ss_dssp             HHHHHHHH-HCCSCHHHHHHHHHHHHHSC--HHH---HHHHHHHHHHHHHHHHHHHHHS--T-TEEEECCSBTTEEEEEE
T ss_pred             HHHHHHhc-cCCCCHHHHHHHHHHHHhcC--HHH---HHHHHHHHHHHHHHHHHHHhcC--C-CceecCCCeeEEEEEec
Confidence            44444444 56788999999999998532  344   5678899999999999999876  3 37888889999999876


Q ss_pred             C----------HHHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 N----------ATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~----------~~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +          .+.+++|.++++||+.+.+        ||+++ .++++|++.+++|.++
T Consensus       362 ~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~  420 (427)
T 3dyd_A          362 EMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT-VPEVMMLEACSRIQEF  420 (427)
T ss_dssp             CGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC-SCHHHHHHHHHHHHHH
T ss_pred             CHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC-CCHHHHHHHHHHHHHH
Confidence            5          5678889889999998653        99987 8999999999998875

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=98.36  E-value=2.9e-06  Score=84.06  Aligned_cols=85  Identities=12%  Similarity=0.166  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCceEEec-----CCCHHHHHHHHHhCCeEEeCC---------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT-----GLNATQVEKLIKEHSVYLTKD---------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~---------  395 (420)
                      .++++.+++++.++++.+.+.|++.|    |.... ...+.|.|+     +++.+++..+++++||++.+.         
T Consensus       277 ~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~  352 (417)
T 3n0l_A          277 SDEWKVYAKQVRTNAQVLANVLMDRK----FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSP  352 (417)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCC----ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCccc
Confidence            35667778899999999999999876    44333 133445553     346778877778999998732         


Q ss_pred             -----CcEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707        396 -----GRISMAGV-----TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----gRis~agl-----~~~ni~~la~AI~~vv  419 (420)
                           -||++..+     ++++|++++++|.+++
T Consensus       353 ~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l  386 (417)
T 3n0l_A          353 FITSGLRLGTPALTARGFKEKEMEIVSNYIADIL  386 (417)
T ss_dssp             TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence                 27777654     5689999999998875

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=98.35  E-value=2e-06  Score=85.08  Aligned_cols=83  Identities=14%  Similarity=0.163  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC-CCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCCC----cEEEc-
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKDG----RISMA-  401 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~-~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-  401 (420)
                      +.+.++++++|+.+.+.|++++.. ..|..+ ...|.|.++.+      +. +.++.|+ +.||++.|++    ||+++ 
T Consensus       302 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~iRi~~~~  379 (406)
T 4adb_A          302 PEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAGGNVVRFAPAL  379 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESSTTEEEECCCT
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecCCCeEEEECCC
Confidence            456678888888888888776421 012222 23466665422      23 4456664 6699999875    78533 


Q ss_pred             ccCCCCHHHHHHHHHHHh
Q psy16707        402 GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       402 gl~~~ni~~la~AI~~vv  419 (420)
                      ..+.+.++++.++|.+++
T Consensus       380 ~~~~e~i~~~~~~l~~~l  397 (406)
T 4adb_A          380 NVSEEEVTTGLDRFAAAC  397 (406)
T ss_dssp             TCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            357788999999888765

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=98.34  E-value=8e-07  Score=86.00  Aligned_cols=86  Identities=15%  Similarity=0.016  Sum_probs=61.0

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      ..||+..++.      +++.+.|+++.....  .....|.|..|.++|++++++++ |.+       .+           
T Consensus         4 ~~i~~~~~~~------~~p~~~~~~a~~~~~--~~~~~y~~~~~~~~l~~~la~~~-g~~-------~~-----------   56 (347)
T 1jg8_A            4 MMIDLRSDTV------TKPTEEMRKAMAQAE--VGDDVYGEDPTINELERLAAETF-GKE-------AA-----------   56 (347)
T ss_dssp             -CEECSCGGG------CCCCHHHHHHHHTCC--CCCGGGTCCHHHHHHHHHHHHHH-TCS-------EE-----------
T ss_pred             eEEEeccccC------CCCCHHHHHHHhcCC--CCCcccCCChHHHHHHHHHHHHh-CCc-------eE-----------
Confidence            4578888872      345577777765432  12347888889999999999976 432       12           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN  287 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n  287 (420)
                                 +.+.|||.|+.+++..+  +.| ||+|++++|+|+.
T Consensus        57 -----------~~~~~gt~a~~~~~~~~--~~~-gd~Vl~~~~~~~~   89 (347)
T 1jg8_A           57 -----------LFVPSGTMGNQVSIMAH--TQR-GDEVILEADSHIF   89 (347)
T ss_dssp             -----------EEESCHHHHHHHHHHHH--CCT-TCEEEEETTCHHH
T ss_pred             -----------EEecCcHHHHHHHHHHh--cCC-CCEEEEcCcchhh
Confidence                       56888998888776543  457 9999999999864

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=98.34  E-value=7e-06  Score=81.34  Aligned_cols=82  Identities=9%  Similarity=0.093  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCC----CceEEecCCC-HH-HHHHHHHhCCeEEeCC--C--cE
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKE----GSNKPWNHITDQ----IGMFCYTGLN-AT-QVEKLIKEHSVYLTKD--G--RI  398 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q----~GmF~~~~l~-~~-~v~~Ll~e~~Vy~~p~--g--Ri  398 (420)
                      .++.++++++++|+.+.+.|++.    |    +..+.++    .|.|.++.++ .+ .++.| .++||++...  +  ||
T Consensus       302 ~~~~~~~~~~~~~~~l~~~L~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~~~~~~lRi  376 (416)
T 1qz9_A          302 DMASLRRKSLALTDLFIELVEQRCAAHE----LTLVTPREHAKRGSHVSFEHPEGYAVIQAL-IDRGVIGDYREPRIMRF  376 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTSC----CEECSCSSGGGBCSEEEEECTTHHHHHHHH-HTTTEECEEETTTEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhccCCC----eEEeCCCCHHHcCCEEEEecCCHHHHHHHH-HhCCcEeccCCCCeEEE
Confidence            45667789999999999999886    5    5544443    2445554433 44 44555 5789998652  2  99


Q ss_pred             EEc--ccCCCCHHHHHHHHHHHh
Q psy16707        399 SMA--GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~a--gl~~~ni~~la~AI~~vv  419 (420)
                      +++  ..+.+++++++++|.+++
T Consensus       377 s~~~~~~t~~~i~~~~~~l~~~~  399 (416)
T 1qz9_A          377 GFTPLYTTFTEVWDAVQILGEIL  399 (416)
T ss_dssp             ECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             eCcccCCCHHHHHHHHHHHHHHH
Confidence            997  578999999999998875

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=98.33  E-value=8e-06  Score=80.29  Aligned_cols=83  Identities=16%  Similarity=0.137  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHH
Q psy16707        181 PSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGS  260 (420)
Q Consensus       181 ~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtga  260 (420)
                      +.|.+|......+ .  .|.+..|..+|++++++++ |.+       .+                      +.|.|||.|
T Consensus        20 ~~~~~a~~~~~~~-~--~~~~~~~~~~l~~~la~~~-~~~-------~~----------------------~~~~~gt~a   66 (393)
T 1mdo_A           20 AEELAAVKTVLDS-G--WITTGPKNQELEAAFCRLT-GNQ-------YA----------------------VAVSSATAG   66 (393)
T ss_dssp             HHHHHHHHHHHHH-T--CCSSSHHHHHHHHHHHHHH-CCS-------EE----------------------EEESCHHHH
T ss_pred             HHHHHHHHHHHhc-C--CcCCChHHHHHHHHHHHHh-CCC-------cE----------------------EEecChHHH
Confidence            5556666655533 2  3556678999999999987 321       22                      678999999


Q ss_pred             HHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        261 LRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       261 l~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+++..+. +.| ||+|++++|+|+.+...++..|++
T Consensus        67 l~~~~~~~~-~~~-gd~Vl~~~~~~~~~~~~~~~~g~~  102 (393)
T 1mdo_A           67 MHIALMALG-IGE-GDEVITPSMTWVSTLNMIVLLGAN  102 (393)
T ss_dssp             HHHHHHHTT-CCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred             HHHHHHHcC-CCC-CCEEEeCCCccHhHHHHHHHCCCE
Confidence            999987541 457 899999999999999988888764

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=98.32  E-value=4.1e-06  Score=82.57  Aligned_cols=85  Identities=24%  Similarity=0.362  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEecC-----CCHHHHHHHHHhCCeEEeCC----------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYTG-----LNATQVEKLIKEHSVYLTKD----------  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~~-----l~~~~v~~Ll~e~~Vy~~p~----------  395 (420)
                      +.++.++++++++|+.+.+.|++.|    +..+.+ ..|.|.|+.     .+.+.+...+.++||++.++          
T Consensus       276 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~  351 (405)
T 2vi8_A          276 DDFKAYAKRVVDNAKRLASALQNEG----FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPF  351 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCC
Confidence            3556777999999999999999886    554443 357777653     34555544557899999762          


Q ss_pred             --C--cEEEcc-----cCCCCHHHHHHHHHHHhC
Q psy16707        396 --G--RISMAG-----VTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 --g--Ris~ag-----l~~~ni~~la~AI~~vv~  420 (420)
                        +  |||++.     ++.+.++++.++|.++++
T Consensus       352 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~  385 (405)
T 2vi8_A          352 VTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred             CCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHh
Confidence              1  999985     689999999999998753

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=98.31  E-value=3.5e-06  Score=83.45  Aligned_cols=84  Identities=21%  Similarity=0.284  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEec-----CCCHHHHHHHHHhCCeEEe----CC------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLT----KD------  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~----p~------  395 (420)
                      ++++.+.++++++++.+.+.|++.|    |..+.+ ..|.|.|+     +.+.+.+..+++++||++.    |+      
T Consensus       286 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~  361 (425)
T 3ecd_A          286 DDFKTYIDRVLANAQALGDVLKAGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPT  361 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence            4556777899999999999999877    554443 35666664     3456777777789999998    54      


Q ss_pred             --C--cEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707        396 --G--RISMAGVT-----SKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g--Ris~agl~-----~~ni~~la~AI~~vv  419 (420)
                        +  ||++..++     .+.+++++++|.+++
T Consensus       362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l  394 (425)
T 3ecd_A          362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEVF  394 (425)
T ss_dssp             TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CccceeccchhheeccCCHHHHHHHHHHHHHHH
Confidence              1  66644443     588999999998875

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=98.29  E-value=2.7e-06  Score=84.74  Aligned_cols=99  Identities=12%  Similarity=0.036  Sum_probs=66.1

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCC--CCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLD--KEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~--~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      ...||++.|.+-.+-| + .++.|.+|.....++...  ..|.|..|.+++++++++++-| +    .+++|        
T Consensus        41 ~~~id~~~~~~~~~lg-~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~----~~~~v--------  105 (426)
T 1sff_A           41 REYLDFAGGIAVLNTG-H-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG-D----FAKKT--------  105 (426)
T ss_dssp             CEEEESSHHHHTCTTC-B-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC-S----SCEEE--------
T ss_pred             CEEEEcccChhhcccC-C-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc-c----cccEE--------
Confidence            4578998887433445 2 556677776665543211  2577888999999999998743 1    12444        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHH-HhcCCCCCEEEEcCCCCCCcH
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFL-KNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l-~~~~p~gd~VlvpdP~w~ny~  289 (420)
                                    +.|.||+.|+.+++.+. ....| + .|++++|+|+.+.
T Consensus       106 --------------~~~~g~~~a~~~~~~~a~~~~~~-~-~vi~~~p~y~~~~  142 (426)
T 1sff_A          106 --------------LLVTTGSEAVENAVKIARAATKR-S-GTIAFSGAYHGRT  142 (426)
T ss_dssp             --------------EEESSHHHHHHHHHHHHHHHHTC-C-EEEEETTCCCCSS
T ss_pred             --------------EEeCchHHHHHHHHHHHHHhhCC-C-eEEEECCCcCCCc
Confidence                          56999999999987621 11234 4 8999999997543

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=98.25  E-value=3.4e-06  Score=87.23  Aligned_cols=84  Identities=20%  Similarity=0.311  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC-CceEEec-----CCCHHHHHHHHHhCCeEEe----CC------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ-IGMFCYT-----GLNATQVEKLIKEHSVYLT----KD------  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q-~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~----p~------  395 (420)
                      .+++.+.+++.++|+.+.+.|++.|    +..+.+. ...+.++     +++.+++..++++.||.+.    |+      
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~  396 (483)
T 1rv3_A          321 PEFKEYQRQVVANCRALSAALVELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALR  396 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCC
Confidence            3456777899999999999999887    5544432 2234442     5567777777789999998    64      


Q ss_pred             --C-cEEEcccC-----CCCHHHHHHHHHHHh
Q psy16707        396 --G-RISMAGVT-----SKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g-Ris~agl~-----~~ni~~la~AI~~vv  419 (420)
                        + ||+++..+     ++++++++++|.+++
T Consensus       397 ~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l  428 (483)
T 1rv3_A          397 PSGLRLGTPALTSRGLLEKDFQKVAHFIHRGI  428 (483)
T ss_dssp             CCEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CceEEeecCCcccCCCCHHHHHHHHHHHHHHH
Confidence              1 99998654     689999999998875

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=98.25  E-value=1.8e-05  Score=81.77  Aligned_cols=83  Identities=14%  Similarity=0.125  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec--CCCHHHH-HHHHHhCCeEEeCC-----CcEEEccc-
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQV-EKLIKEHSVYLTKD-----GRISMAGV-  403 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~--~l~~~~v-~~Ll~e~~Vy~~p~-----gRis~agl-  403 (420)
                      .++.+.+++.+.++.+.+.|+++.   .+..+.++.+++.+.  +.+...+ ++| .+.||++...     .|++++.. 
T Consensus       374 ~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~Gi~v~g~~~~~~~Ri~~~~~~  449 (514)
T 3mad_A          374 GYLDATRRILQAADRLKAGVRAIP---SLKILGDPLWVIAVASDELNIYQVMEEM-AGRGWRLNGLHRPPAFHVALTLRH  449 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTST---TCEESSCCSSEEEEECSSSCHHHHHHHH-HTTTCBCEEETTTTEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCC---CeEEeCCCeEEEEEeCCCCCHHHHHHHH-HhcCCEeccCCCCCeEEEEEecCC
Confidence            355666888999999999999862   166666777766653  3455555 555 5779988321     28888744 


Q ss_pred             -CCCCHHHHHHHHHHHh
Q psy16707        404 -TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       404 -~~~ni~~la~AI~~vv  419 (420)
                       +.+.++.+.++|.+++
T Consensus       450 ~~~e~i~~~l~~L~~~l  466 (514)
T 3mad_A          450 TEPGVVDRFLADLQDAV  466 (514)
T ss_dssp             GSTTHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence             4579999999998875

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=98.23  E-value=1.2e-05  Score=84.06  Aligned_cols=84  Identities=13%  Similarity=0.279  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEec-----CCCHHHHHHHHHhCCeEEeC----C------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTK----D------  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p----~------  395 (420)
                      .+.+++.+++.+.++.|.+.|++.|    |..+.. ....+.|+     +++.++++.++++.||++.+    +      
T Consensus       331 ~~~~~~~~~~~~na~~L~~~L~~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~  406 (490)
T 2a7v_A          331 PMFREYSLQVLKNARAMADALLERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT  406 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCC
Confidence            3446666888889999999999988    554432 12233443     45667787777899999963    2      


Q ss_pred             --C-cEEEc-----ccCCCCHHHHHHHHHHHh
Q psy16707        396 --G-RISMA-----GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --g-Ris~a-----gl~~~ni~~la~AI~~vv  419 (420)
                        | ||+..     |++++.+++++++|++++
T Consensus       407 ~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l  438 (490)
T 2a7v_A          407 PGGLRLGAPALTSRQFREDDFRRVVDFIDEGV  438 (490)
T ss_dssp             CSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCceEecccccccCCCCHHHHHHHHHHHHHHH
Confidence              1 77654     357789999999999875

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=98.23  E-value=1.7e-05  Score=77.32  Aligned_cols=82  Identities=16%  Similarity=0.103  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HhcCCCCCCcccCC-----CCceEEecCCC-H-HHHHHHHHhCCeEEeCC-------C--
Q psy16707        334 VKGMADRIISMRQSLKDNL-QKEGSNKPWNHITD-----QIGMFCYTGLN-A-TQVEKLIKEHSVYLTKD-------G--  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L-~~~g~~~~w~~i~~-----q~GmF~~~~l~-~-~~v~~Ll~e~~Vy~~p~-------g--  396 (420)
                      ++.++++++++|+.+.+.| +++|    +..+.+     ..|.|.++.++ . +.+++| .++||++.++       +  
T Consensus       279 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~i  353 (385)
T 2bkw_A          279 LHKRWDLHREMSDWFKDSLVNGLQ----LTSVSRYPSNMSAHGLTAVYVADPPDVIAFL-KSHGVVIAGGIHKDIGPKYI  353 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTC----CEESSCSSSTTBCSSCEEEECSCHHHHHHHH-HHTTEECBCCCCTTTGGGEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC----ceecccCcccccCCceEEEecCCHHHHHHHH-HHCCeEEeCCCCcccCCCEE
Confidence            6677889999999999999 8765    444432     24667765443 3 445666 5789999874       1  


Q ss_pred             cEE-Ec----ccCCCCHHHHHHHHHHHhC
Q psy16707        397 RIS-MA----GVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       397 Ris-~a----gl~~~ni~~la~AI~~vv~  420 (420)
                      ||| ++    ..+.+.++++.++|.++++
T Consensus       354 Ris~~~~~~~~~~~e~i~~~~~~l~~~~~  382 (385)
T 2bkw_A          354 RIGHMGVTACNKNLPYMKNCFDLIKLALQ  382 (385)
T ss_dssp             EECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred             EEEccccccccCCHHHHHHHHHHHHHHHH
Confidence            899 65    3699999999999998753

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=98.22  E-value=6.8e-06  Score=80.16  Aligned_cols=82  Identities=17%  Similarity=0.273  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEec--CCCHH-HHHHHHHhCCeEEeCCC--------cEEE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--GLNAT-QVEKLIKEHSVYLTKDG--------RISM  400 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~~--~l~~~-~v~~Ll~e~~Vy~~p~g--------Ris~  400 (420)
                      ++.++++++++|+.+.+.|+++|    +....+  ..++|.+.  +.+.+ .++.|++++||.+.++.        |||+
T Consensus       276 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~  351 (376)
T 3f0h_A          276 ADAEVARIASQAADFRAKIKDLP----FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH  351 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSS----EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence            67788999999999999998876    343332  23455543  44554 45788777899998752        9998


Q ss_pred             c-ccCCCCHHHHHHHHHHHh
Q psy16707        401 A-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       401 a-gl~~~ni~~la~AI~~vv  419 (420)
                      . ..+.++++++.++|.+++
T Consensus       352 ~~~~t~e~i~~~~~~l~~~l  371 (376)
T 3f0h_A          352 IGALTHEDNTTLVNAFKDLQ  371 (376)
T ss_dssp             CSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHH
Confidence            6 358889999999999875

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=98.20  E-value=1.7e-05  Score=78.88  Aligned_cols=82  Identities=16%  Similarity=0.116  Sum_probs=55.8

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      +++|++.|.     |.+++++.|.+|..         .|.   +-..+.+++++++   +|.+    .++.+        
T Consensus        29 ~v~~~~~~~-----~~~~~~~~v~~a~~---------~~~---~~~~~~~~~~~~~a~~~g~~----~~~~~--------   79 (374)
T 2aeu_A           29 ALYDLSGLS-----GGFLIDEKDKALLN---------TYI---GSSYFAEKVNEYGLKHLGGD----ENDKC--------   79 (374)
T ss_dssp             GCEECSSCC-----CCCCCCHHHHHHHT---------STT---HHHHHHHHHHHHHHHHHTCC----TTEEE--------
T ss_pred             ceeeecccC-----CCCCCCHHHHHHHH---------Hhc---CchHHHHHHHHHHHHHhCCC----CcceE--------
Confidence            589999987     56788899988764         111   1123334444332   4542    12333        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                                    +.|.|||.|+.+++..+    | ||+|++++|+|+.|..
T Consensus        80 --------------~~~~ggt~a~~~~~~~~----~-gd~Vl~~~~~y~~~~~  113 (374)
T 2aeu_A           80 --------------VGFNRTSSAILATILAL----K-PKKVIHYLPELPGHPS  113 (374)
T ss_dssp             --------------EEESSHHHHHHHHHHHH----C-CSEEEEECSSSSCCTH
T ss_pred             --------------EEEcChHHHHHHHHHhC----C-CCEEEEecCCCCccHH
Confidence                          56899999999987643    7 9999999999988765

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=98.18  E-value=7.6e-06  Score=80.93  Aligned_cols=84  Identities=14%  Similarity=0.208  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC-CCceEEec-----CCCHHHHHHHHHhCCeEEeC-------C---
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTK-------D---  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~-q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p-------~---  395 (420)
                      ++++.+++++.++++.+.+.|++.|    |..+.. ..+.|.|+     +.+.+++..+++++||++.|       +   
T Consensus       285 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~  360 (420)
T 3gbx_A          285 PEFKVYQQQVAKNAKAMVEVFLNRG----YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPF  360 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTT
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhcC----CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccC
Confidence            4556777899999999999999877    554443 45566653     34667777777899999987       2   


Q ss_pred             ----CcEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707        396 ----GRISMAGV-----TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ----gRis~agl-----~~~ni~~la~AI~~vv  419 (420)
                          -||+++.+     +++.+++++++|++++
T Consensus       361 ~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l  393 (420)
T 3gbx_A          361 VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL  393 (420)
T ss_dssp             TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCcceEEecchhcccCCCHHHHHHHHHHHHHHH
Confidence                28888754     4588999999998875

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=98.17  E-value=1.3e-05  Score=78.24  Aligned_cols=96  Identities=15%  Similarity=0.065  Sum_probs=72.9

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.+|++.|.       |...+ |+++...+...   ..|.|..|..+|++++++++ |.+       .+          
T Consensus         6 ~~~~~l~~~~-------~~~~~-~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~----------   56 (374)
T 3uwc_A            6 VPYSYLERQF-------ADIEP-YLNDLREFIKT---ADFTLGAELEKFEKRFAALH-NAP-------HA----------   56 (374)
T ss_dssp             BCSCCHHHHT-------SSCHH-HHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHT-TCS-------EE----------
T ss_pred             ceeeccccCC-------CCchH-HHHHHHHHHHc---CCcccChhHHHHHHHHHHHh-CCC-------cE----------
Confidence            4568888885       44455 77776666543   36888889999999999976 322       12          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                  +.+.|||.|+.+++..+ .+.| ||+|++++|+|+.+...++..|++
T Consensus        57 ------------~~~~~gt~a~~~~~~~~-~~~~-gd~v~~~~~~~~~~~~~~~~~g~~  101 (374)
T 3uwc_A           57 ------------IGVGTGTDALAMSFKML-NIGA-GDEVITCANTFIASVGAIVQAGAT  101 (374)
T ss_dssp             ------------EEESCHHHHHHHHHHHT-TCCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred             ------------EEeCCHHHHHHHHHHHc-CCCC-CCEEEECCCccHHHHHHHHHcCCE
Confidence                        56899999998887644 1457 999999999999999999888775

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=98.16  E-value=1.1e-05  Score=82.19  Aligned_cols=102  Identities=15%  Similarity=0.098  Sum_probs=67.2

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||++.|.|..+-|  ...|.|.+|......+ ..+.|.+..|..+.++++++++.....  ...++|         
T Consensus        50 G~~~lD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v---------  115 (460)
T 3gju_A           50 GRKSIDAFAGLYCVNVG--YGRQKIADAIATQAKN-LAYYHAYVGHGTEASITLAKMIIDRAP--KGMSRV---------  115 (460)
T ss_dssp             CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-HSCCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEE---------
T ss_pred             CCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHhhCC--CCcCEE---------
Confidence            45679999997766767  3456666665554433 445677777777777777776633211  122344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcC-----CCCCEEEEcCCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFF-----PGEKVIYVPTPTWGN  287 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~-----p~gd~VlvpdP~w~n  287 (420)
                                   +.|.||+.|+..++.++..+.     |.++.|++.+|+|..
T Consensus       116 -------------~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg  156 (460)
T 3gju_A          116 -------------YFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHG  156 (460)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred             -------------EEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCC
Confidence                         669999999999887664331     326899999999853

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=98.16  E-value=6.6e-06  Score=83.71  Aligned_cols=83  Identities=17%  Similarity=0.196  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-----CCCCCCcccC-CCCceEEec-----CCCHHHHHHHHHhCCeEEe----CC--
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKE-----GSNKPWNHIT-DQIGMFCYT-----GLNATQVEKLIKEHSVYLT----KD--  395 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~-----g~~~~w~~i~-~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~----p~--  395 (420)
                      +++.+.+++.++++.+.+.|++.     |    +..+. ...+.|.++     +++.+.+..+++++||.+.    |+  
T Consensus       299 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~  374 (447)
T 3h7f_A          299 EFADRQRRTLSGARIIADRLMAPDVAKAG----VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDP  374 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSHHHHHTT----CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCCC----eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCC
Confidence            45666788999999999999887     7    44443 234445543     4567888888899999987    32  


Q ss_pred             --------CcEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707        396 --------GRISMAG-----VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 --------gRis~ag-----l~~~ni~~la~AI~~vv  419 (420)
                              -||+...     ++++.+++++++|.+++
T Consensus       375 ~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l  411 (447)
T 3h7f_A          375 RPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATAL  411 (447)
T ss_dssp             ------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence                    1777654     56789999999998875

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=98.15  E-value=3.1e-05  Score=76.26  Aligned_cols=84  Identities=13%  Similarity=0.193  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-C-CCHHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCC
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-G-LNATQVEKLIKEHSVYLTKDG----RISMA-GVTSKN  407 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-~-l~~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~n  407 (420)
                      +.++++++++++.+.+.|++++.+. +.....+.+++.|. + ...+.++.| .++||++.|++    ||++. ..+.+.
T Consensus       302 ~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~~iRi~~~~~~~~~~  379 (392)
T 3ruy_A          302 EKLTERSLQLGEKLVGQLKEIDNPM-ITEVRGKGLFIGIELNEPARPYCEQL-KAAGLLCKETHENVIRIAPPLVISEED  379 (392)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCTT-EEEEEEETTEEEEEESSCSHHHHHHH-HTTTEECCCBTTTEEEECCCTTCCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCCC-ceEEEeeeeEEEEEEcchHHHHHHHH-HHCCcEEecCCCCEEEEECCCCCCHHH
Confidence            5667899999999999999886431 22233344444443 2 234555666 48999999975    77743 357788


Q ss_pred             HHHHHHHHHHHhC
Q psy16707        408 VGYLAKAIHAVTK  420 (420)
Q Consensus       408 i~~la~AI~~vv~  420 (420)
                      ++++.++|.++++
T Consensus       380 i~~~~~~l~~~l~  392 (392)
T 3ruy_A          380 LEWAFQKIKAVLS  392 (392)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998864

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=98.13  E-value=1.1e-05  Score=82.34  Aligned_cols=104  Identities=12%  Similarity=0.029  Sum_probs=68.1

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...+|+..|.+-.+=|  ...|.|.+|.....++ ..+.|.+..|..+.++++++++-....  ...++|         
T Consensus        49 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v---------  114 (459)
T 4a6r_A           49 GNKIIDGMAGLWCVNVG--YGRKDFAEAARRQMEE-LPFYNTFFKTTHPAVVELSSLLAEVTP--AGFDRV---------  114 (459)
T ss_dssp             CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-CSCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEE---------
T ss_pred             CCEEEECCCchhcccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHHhCC--CCCCEE---------
Confidence            34578998887656666  3456666666554443 445676667777777777777633211  123344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcC-----CCCCEEEEcCCCCCCcH
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFF-----PGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~-----p~gd~VlvpdP~w~ny~  289 (420)
                                   +.|.||+.|+..++.++..+.     |.++.|++.+|+|..|.
T Consensus       115 -------------~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~  157 (459)
T 4a6r_A          115 -------------FYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGST  157 (459)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred             -------------EEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCcc
Confidence                         569999999999887665431     23789999999987443

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=98.13  E-value=0.00014  Score=74.57  Aligned_cols=83  Identities=7%  Similarity=0.173  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--CCCCCCccc-CCCCceEEec--CCCHHHHHHHHHhCCeEEeCC-----CcEEEcc
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKE--GSNKPWNHI-TDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----GRISMAG  402 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i-~~q~GmF~~~--~l~~~~v~~Ll~e~~Vy~~p~-----gRis~ag  402 (420)
                      .++.+.+++.+.++.+.+.|++.  |    +..+ .+..++|+|.  +.+...+...+.+.||.+.++     .|++++.
T Consensus       342 ~~~~~~~~~~~~~~~l~~~L~~~~~g----~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~~  417 (497)
T 3mc6_A          342 GYIESCQEIVGAAMKFKKYIQENIPD----LDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFTR  417 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCTT----CEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEecCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEeC
Confidence            34566688888899999999984  4    5544 3455666664  445655544446789988653     2999998


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                      .+.+.++.+.+++.+++
T Consensus       418 ~t~e~i~~~~~~L~~~l  434 (497)
T 3mc6_A          418 LSAHVVDEICDILRTTV  434 (497)
T ss_dssp             TTTCTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            89999999999998875

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=98.13  E-value=4.5e-05  Score=74.28  Aligned_cols=104  Identities=18%  Similarity=0.243  Sum_probs=66.8

Q ss_pred             cCCCchHHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCC-cccC---CCCceEEecCCC--
Q psy16707        306 YSSPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPW-NHIT---DQIGMFCYTGLN--  377 (420)
Q Consensus       306 ~s~pp~~ga~iv~~IL~dp~L~~~w~~--el~~m~~r~~~~R~~l~~~L~~~g~~~~w-~~i~---~q~GmF~~~~l~--  377 (420)
                      ..++|..++..+...|     +. ..+  .++.++++++++|+.+.+.|+++|.   + ....   .+.+.+.++.++  
T Consensus       237 ~~t~~~~~~~a~~~al-----~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  307 (362)
T 2c0r_A          237 YNTPPSFGIYMVNEVL-----KW-IEERGGLEGVQQANRKKASLIYDAIDQSGG---FYRGCVDVDSRSDMNITFRLASE  307 (362)
T ss_dssp             SSCCCHHHHHHHHHHH-----HH-HHHTTHHHHHHHHHHHHHHHHHHHHHTSTT---SSEESSCGGGBCSSEEEEECSCH
T ss_pred             CCCchHHHHHHHHHHH-----HH-HHHhCCHHHHHHHHHHHHHHHHHHHHHcCC---ccccCCChHHcCCcEEEEEcCCc
Confidence            3466767666555433     21 123  4678889999999999999998761   2 2221   123344443332  


Q ss_pred             --H-HHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        378 --A-TQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 --~-~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                        . ++++.| ++.||.+.++    +  |||++.- +.+.++++.++|++++
T Consensus       308 ~~~~~~~~~L-~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  358 (362)
T 2c0r_A          308 ELEKEFVKAS-EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFK  358 (362)
T ss_dssp             HHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHH-HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence              3 444555 7889988764    2  9998743 5788999999998764

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=98.09  E-value=2.7e-05  Score=76.95  Aligned_cols=99  Identities=11%  Similarity=0.004  Sum_probs=61.7

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...+|++.|.+.++=|  ...|.|.+|.....++ ..+.|  ..+..+.++++++++....+    .++|         
T Consensus        35 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~~~--~~~~~~~~~~l~~~la~~~~----~~~v---------   96 (395)
T 3nx3_A           35 AKKYLDFSSGIGVCALG--YNHAKFNAKIKAQVDK-LLHTS--NLYYNENIAAAAKNLAKASA----LERV---------   96 (395)
T ss_dssp             CCEEEESSHHHHTCTTC--BSCHHHHHHHHHHHTT-CSCCC--TTSBCHHHHHHHHHHHHHHT----CSEE---------
T ss_pred             CCEEEECCCcHHhccCC--CCCHHHHHHHHHHHHh-ccccc--cccCCHHHHHHHHHHHHhcC----CCeE---------
Confidence            34678999887655656  3566777776665543 33333  22334444444444421111    1334         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhc-----CCCCCEEEEcCCCCCCcH
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----FPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----~p~gd~VlvpdP~w~ny~  289 (420)
                                   +.|.|||.|+..+..++...     .+ ++.|++++|+|..+.
T Consensus        97 -------------~~~~gg~ea~~~al~~~~~~~~~~g~~-~~~vi~~~~~yhg~~  138 (395)
T 3nx3_A           97 -------------FFTNSGTESIEGAMKTARKYAFNKGVK-GGQFIAFKHSFHGRT  138 (395)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHHTTCT-TCEEEEETTCCCCSS
T ss_pred             -------------EEeCCHHHHHHHHHHHHHHHhhccCCC-CCEEEEEcCCcCCCC
Confidence                         67999999999988765443     35 799999999997665

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=98.09  E-value=2.1e-05  Score=78.94  Aligned_cols=101  Identities=10%  Similarity=-0.057  Sum_probs=62.5

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      ...+|+..|.+-++-|  ...|.|.+|.....++ . ..|.+..|..+.++++++++.....  ...++|          
T Consensus        29 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v----------   92 (430)
T 3i4j_A           29 RRYLDGSSGALVANIG--HGRAEVGERMAAQAAR-L-PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRF----------   92 (430)
T ss_dssp             CEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-C-CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEE----------
T ss_pred             CEEEECCCchhccccC--CCCHHHHHHHHHHHHh-c-ccccccccCCHHHHHHHHHHHHhCC--CCCCEE----------
Confidence            4578998886656666  3366666666555433 2 3455566777777777776632211  122344          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhc------CCCCCEEEEcCCCCCCcH
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNF------FPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~------~p~gd~VlvpdP~w~ny~  289 (420)
                                  +.|.||+.|+..++..+...      .+ ++.|++++|+|..|.
T Consensus        93 ------------~~~~gg~ea~~~al~~~~~~~~~~g~~~-~~~vi~~~~~yhg~~  135 (430)
T 3i4j_A           93 ------------WAVSGGSEATESAVKLARQYHVERGEPG-RFKVITRVPSYHGAS  135 (430)
T ss_dssp             ------------EEESSHHHHHHHHHHHHHHHHHHTTCTT-CCEEEEETTC-----
T ss_pred             ------------EEeCcHHHHHHHHHHHHHHHHHhcCCCC-CcEEEEEeCCcCCCC
Confidence                        66999999999988765433      34 789999999987544

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=98.08  E-value=2.4e-05  Score=78.72  Aligned_cols=95  Identities=14%  Similarity=-0.017  Sum_probs=65.7

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...+|+.-|.+..+=|  ...|.|.+|.....++ ..+.|.|..+..+|++++++++-+       .++|         
T Consensus        52 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~-------~~~v---------  112 (429)
T 3k28_A           52 GNEYIDYVLSWGPLIHG--HANDRVVEALKAVAER-GTSFGAPTEIENKLAKLVIERVPS-------IEIV---------  112 (429)
T ss_dssp             CCEEEESCGGGTTCTTC--BSCHHHHHHHHHHHHH-CSCCSSCCHHHHHHHHHHHHHSTT-------CSEE---------
T ss_pred             CCEEEECCCChhhcccC--CCCHHHHHHHHHHHhh-CcCcCCCCHHHHHHHHHHHHhCCC-------CCEE---------
Confidence            45678999887766666  3566777666655443 333455677778899998887531       2344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG  286 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~  286 (420)
                                   +.|.|||.|+..++.++....+ ++.|++++|+|.
T Consensus       113 -------------~~~~~Gsea~~~ai~~a~~~~~-~~~vi~~~~~yh  146 (429)
T 3k28_A          113 -------------RMVNSGTEATMSALRLARGYTG-RNKILKFIGCYH  146 (429)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHT-CCEEEEEETCCC
T ss_pred             -------------EEeCChHHHHHHHHHHHHHhhC-CCEEEEECCCcC
Confidence                         5699999999998865543334 689999888885

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=98.08  E-value=8.1e-06  Score=82.04  Aligned_cols=97  Identities=12%  Similarity=-0.008  Sum_probs=64.6

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...+|+..|.|..+=|  ...|.|.+|......+ ....+.|.....+|.+++++++-+       .++|         
T Consensus        54 g~~ylD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~-------~~~v---------  114 (434)
T 3l44_A           54 GNKYIDYLAAYGPIITG--HAHPHITKAITTAAEN-GVLYGTPTALEVKFAKMLKEAMPA-------LDKV---------  114 (434)
T ss_dssp             CCEEEECCGGGTTCSSC--BTCHHHHHHHHHHHHH-CSCCSSCCHHHHHHHHHHHHHCTT-------CSEE---------
T ss_pred             CCEEEECCCchhccccC--CCCHHHHHHHHHHHHh-CcCCCCCCHHHHHHHHHHHHhCCC-------CCEE---------
Confidence            45678998887666666  3456666666554433 222233555667888888876521       2344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                                   +.|.|||.|+..++.++....+ ++.|++++|+|..+
T Consensus       115 -------------~~~~sGsea~~~ai~~a~~~~~-~~~vi~~~~~yhg~  150 (434)
T 3l44_A          115 -------------RFVNSGTEAVMTTIRVARAYTG-RTKIMKFAGCYHGH  150 (434)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCS
T ss_pred             -------------EEeCchHHHHHHHHHHHHHhhC-CCEEEEEcCccCCC
Confidence                         5699999999998875543335 78999999998653

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=98.07  E-value=1.8e-05  Score=79.69  Aligned_cols=101  Identities=11%  Similarity=-0.032  Sum_probs=66.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...+|++.|.|-.+-|  ...|.|.+|......+ . ..|.+..|..+.++++++++-....... +++|         
T Consensus        42 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v---------  107 (439)
T 3dxv_A           42 GRELIDLSGAWGAASLG--YGHPAIVAAVSAAAAN-P-AGATILSASNAPAVTLAERLLASFPGEG-THKI---------  107 (439)
T ss_dssp             SCEEEESSTTTTTCTTC--BSCHHHHHHHHHHHHS-C-SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEE---------
T ss_pred             CCEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-c-cCccccccCCHHHHHHHHHHHHhCCCCC-CCEE---------
Confidence            34678999998765566  2556677666655543 2 4576677888888888887743321111 1233         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN  287 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n  287 (420)
                                   +.|.||+.|+..++..+..+.+ ++.|++.+|+|..
T Consensus       108 -------------~~~~ggsea~~~al~~~~~~~~-~~~vi~~~~~yhg  142 (439)
T 3dxv_A          108 -------------WFGHSGSDANEAAYRAIVKATG-RSGVIAFAGAYHG  142 (439)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHS-CCEEEEETTCCCC
T ss_pred             -------------EEeCCHHHHHHHHHHHHHHHhC-CCEEEEECCCCCC
Confidence                         6799999999998875432335 6889998998843

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=98.05  E-value=1.5e-05  Score=78.84  Aligned_cols=82  Identities=13%  Similarity=0.178  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCC----CH-HHHHHHHHhCCeEEeCCC----cEEEc-c
Q psy16707        335 KGMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL----NA-TQVEKLIKEHSVYLTKDG----RISMA-G  402 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l----~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-g  402 (420)
                      +.++++++++|+.+.+.|++.  +.+. +. ..+..|.|+++.+    +. +.++.|+ ++||++.|++    ||++. .
T Consensus       301 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~iRis~~~~  377 (397)
T 2ord_A          301 EGFLEEVEEKGNYLMKKLQEMKEEYDV-VA-DVRGMGLMIGIQFREEVSNREVATKCF-ENKLLVVPAGNNTIRFLPPLT  377 (397)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHCTT-EE-EEEEETTEEEEEECTTSCHHHHHHHHH-HTTEECEEETTTEEEECCCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCc-eE-EEEEEeEEEEEEECChHHHHHHHHHHH-HCCCEEccCCCCEEEEECCcC
Confidence            356688889999999999876  3321 11 1234566666432    23 4456665 5899999864    78854 4


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                      .+.++++++.++|.+++
T Consensus       378 ~~~e~i~~~~~~l~~~l  394 (397)
T 2ord_A          378 VEYGEIDLAVETLKKVL  394 (397)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            68889999999998875

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=98.04  E-value=2.9e-05  Score=74.76  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC----C--cEEEcc-cCCCCH
Q psy16707        337 MADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD----G--RISMAG-VTSKNV  408 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~----g--Ris~ag-l~~~ni  408 (420)
                      +.++++++++.+.+.|+++ |    +....++.+.|.|..++.+.+++| .++||.+.|+    +  ||++.. .+.+.+
T Consensus       265 ~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i  339 (356)
T 1v72_A          265 NARKANAAAQRLAQGLEGLGG----VEVLGGTEANILFCRLDSAMIDAL-LKAGFGFYHDRWGPNVVRFVTSFATTAEDV  339 (356)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTT----EEEESCCCSSEEEEEECHHHHHHH-HHTTCBCBCSSSSTTEEEEECCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCCC----cEEccCCCccEEEEEcCHHHHHHH-HhcCeEEeccccCCCeEEEEecCCCCHHHH
Confidence            4567788888999999874 4    555556778888887777777777 5779999864    2  888653 467899


Q ss_pred             HHHHHHHHHHh
Q psy16707        409 GYLAKAIHAVT  419 (420)
Q Consensus       409 ~~la~AI~~vv  419 (420)
                      +++.++|.+++
T Consensus       340 ~~~~~~l~~~l  350 (356)
T 1v72_A          340 DHLLNQVRLAA  350 (356)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHHH
Confidence            99999998875

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=98.03  E-value=4.8e-05  Score=77.29  Aligned_cols=86  Identities=13%  Similarity=0.123  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC-------CCCcccCCC----CceEEec--CCCH-HHHHHHHHhCCeEEeCC--C-
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSN-------KPWNHITDQ----IGMFCYT--GLNA-TQVEKLIKEHSVYLTKD--G-  396 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~-------~~w~~i~~q----~GmF~~~--~l~~-~~v~~Ll~e~~Vy~~p~--g-  396 (420)
                      ++.+++++.+.++.+.+.|++.-.+       ..+..+.++    .|.|.++  +.+. +..+.| .+.||.+...  + 
T Consensus       354 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~~~  432 (465)
T 3e9k_A          354 MKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPNKDVFQEL-EKRGVVCDKRNPNG  432 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTTCCHHHHH-HTTTEECEEETTTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCHHHHHHHH-HHCCEEEecCCCCE
Confidence            6788899999999999999883100       015555544    3666654  3233 444566 5779998643  2 


Q ss_pred             -cEEE--cccCCCCHHHHHHHHHHHhC
Q psy16707        397 -RISM--AGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       397 -Ris~--agl~~~ni~~la~AI~~vv~  420 (420)
                       |||+  ...+.++|+.+.++|.++++
T Consensus       433 iRis~~~~~~t~edi~~~~~~l~~~l~  459 (465)
T 3e9k_A          433 IRVAPVPLYNSFHDVYKFTNLLTSILD  459 (465)
T ss_dssp             EEEBCCTTTCCHHHHHHHHHHHHHHHT
T ss_pred             EEEeCcccCCCHHHHHHHHHHHHHHHH
Confidence             9987  45588899999999998763

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=98.02  E-value=1.8e-05  Score=79.25  Aligned_cols=96  Identities=11%  Similarity=0.020  Sum_probs=58.4

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||++.|.+-.+-|  ...|.|.+|.....++ ..+ |..   ..+.+.++++++.....   .+++|         
T Consensus        51 g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~-~~~---~~~~~~~la~~l~~~~~---~~~~v---------  111 (427)
T 3fq8_A           51 GNRYIDYVGTWGPAICG--HAHPEVIEALKVAMEK-GTS-FGA---PCALENVLAEMVNDAVP---SIEMV---------  111 (427)
T ss_dssp             SCEEEESSGGGTTCTTC--BTCHHHHHHHHHHHTT-CSC-CSS---CCHHHHHHHHHHHHHST---TCSEE---------
T ss_pred             CCEEEECCCchhhhccC--CCCHHHHHHHHHHHHh-CCC-cCC---CCHHHHHHHHHHHHhCC---CCCEE---------
Confidence            45678999998766767  3567777776665543 222 322   33444444444422111   13444         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGN  287 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~n  287 (420)
                                   +.+.|||.|+..++.+...+.. ++.|++++|+|..
T Consensus       112 -------------~~~~ggsea~~~al~~a~~~~~-~~~vi~~~~~yhg  146 (427)
T 3fq8_A          112 -------------RFVNSGTEACMAVLRIMRAYTG-RDKIIKFEGCYHG  146 (427)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEEETCCCC
T ss_pred             -------------EEeCCHHHHHHHHHHHHHHhhC-CCEEEEECCCcCC
Confidence                         5699999999988854332323 5889999998864

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=98.00  E-value=2.2e-05  Score=78.66  Aligned_cols=113  Identities=18%  Similarity=0.249  Sum_probs=89.3

Q ss_pred             hhccCCCccchHHHHHHHHhC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---C
Q psy16707         11 IRAFYSSPPIHGARIVQEILG-DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---N   86 (420)
Q Consensus        11 ~R~~yS~PP~hGa~iv~~IL~-~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~   86 (420)
                      .|..+.++|..+..++...|. +.    .|.++++.++++++..|+.|.+.|++...+..|..+..+.|||.+..+   +
T Consensus       304 ~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~  379 (430)
T 2x5f_A          304 IRSNISSGPLPTQSAVKHVLKNNK----QFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHDVD  379 (430)
T ss_dssp             HHTTTSSCCHHHHHHHHHHHHSCH----HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEESSSC
T ss_pred             hhcccCCCChHHHHHHHHHHccCh----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCCCCC
Confidence            344677888899999999998 74    799999999999999999999999843211237777778899876644   4


Q ss_pred             HHH-HHHHHHhcceEEcC--CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         87 ATQ-VEKLIKEHSVYLTK--DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 ~~q-v~~L~~~~~IY~~~--~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .++ ++.|.++++|++.+  .|  ||+++..+..+++.++++|.++
T Consensus       380 ~~~~~~~l~~~~gi~v~~g~~~~iRis~~~~~~e~i~~~~~~l~~~  425 (430)
T 2x5f_A          380 PEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKA  425 (430)
T ss_dssp             HHHHHHHHHHHHCEECEECSSSEEEEEGGGSCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEecCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence            544 56787779999976  34  9999988889999999998875

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=97.98  E-value=2.9e-05  Score=80.62  Aligned_cols=117  Identities=13%  Similarity=0.218  Sum_probs=93.6

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccee
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDP----KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFC   81 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~----~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs   81 (420)
                      +|..+ +..+++||..+..++...|++|    ....+|.++++.++++++..|..|.+.|++.  +| |.....|.|||.
T Consensus       341 ~l~~~-~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--~g-~~~~~p~gg~~~  416 (498)
T 3ihj_A          341 QLVKL-LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQV--PG-IHCNPLQGAMYA  416 (498)
T ss_dssp             HHHHH-HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--TT-EECCCCCBSSEE
T ss_pred             HHHHH-HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-cEecCCCeEEEE
Confidence            34444 3478899999999999999975    3678899999999999999999999999875  33 777788999999


Q ss_pred             ec---------------CCCHHH--HHHHHHhcceEEcC-------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707         82 YT---------------GLNATQ--VEKLIKEHSVYLTK-------DG----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        82 ~~---------------gL~~~q--v~~L~~~~~IY~~~-------~G----Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.               |+++++  +..|-++++|++.+       .|    ||+++ .+...++..+++|.++
T Consensus       417 ~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~  489 (498)
T 3ihj_A          417 FPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDF  489 (498)
T ss_dssp             CCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             EEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHH
Confidence            95               556666  57777889999865       33    88984 7778888888887765

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=97.96  E-value=0.00022  Score=72.37  Aligned_cols=81  Identities=12%  Similarity=0.121  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKDG----RISMA-GV  403 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-gl  403 (420)
                      .+.++++++++.+.+.|++++.+  +....+..|.|.++-+      +. +.++.|+ ++||++.|.+    ||++. ..
T Consensus       344 ~~~~~~~~~~~~l~~~L~~l~~~--~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~iRi~~~~~~  420 (439)
T 2oat_A          344 NLAENADKLGIILRNELMKLPSD--VVTAVRGKGLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPTHGDIIRFAPPLVI  420 (439)
T ss_dssp             THHHHHHHHHHHHHHHHTTSCTT--TEEEEEEETTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBSSSSEEEECCCTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCC--CcEEEEeeeeEEEEEEecCccHHHHHHHHHHH-HCCeEEecCCCCEEEEECccCC
Confidence            45688899999999999887632  1111335677776422      23 3456665 6799999853    78665 36


Q ss_pred             CCCCHHHHHHHHHHHh
Q psy16707        404 TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv  419 (420)
                      ++++++++.++|.+++
T Consensus       421 t~e~i~~~l~~l~~~l  436 (439)
T 2oat_A          421 KEDELRESIEIINKTI  436 (439)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            8899999999998875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=97.96  E-value=0.00077  Score=69.07  Aligned_cols=82  Identities=16%  Similarity=0.161  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE--Eec----CCCHHH-HHHHHHhCCeEEe----C---CC-
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF--CYT----GLNATQ-VEKLIKEHSVYLT----K---DG-  396 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF--~~~----~l~~~~-v~~Ll~e~~Vy~~----p---~g-  396 (420)
                      +.++++.+++.++++.+.+.|++.|    +.... +.+.|  +++    +.+.+. +++|+ ++||++.    |   .+ 
T Consensus       340 ~~l~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~-~~Gi~~~~~~~~~~~~~~  413 (474)
T 1wyu_B          340 EGLKKAAALAVLNARYLKELLKEKG----YRVPY-DGPSMHEFVAQPPEGFRALDLAKGLL-ELGFHPPTVYFPLIVKEA  413 (474)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CBCSS-CSSCCSCEEEBCSTTCCHHHHHHHHH-HTTCCCCEESCSTTSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcC----cEecC-CCCcceEEEEEcCCCCCHHHHHHHHH-HCCccccccccccccCCE
Confidence            4566777899999999999999876    43322 22233  232    345544 46665 5699753    1   12 


Q ss_pred             -cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        397 -RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                       ||+++.. +.+.+++++++|.+++
T Consensus       414 lRis~~~~~t~e~id~~~~~L~~~~  438 (474)
T 1wyu_B          414 LMVEPTETEAKETLEAFAEAMGALL  438 (474)
T ss_dssp             EEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCHHHHHHHHHHHHHHH
Confidence             9998743 5678999999998875

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=97.95  E-value=5.8e-05  Score=75.98  Aligned_cols=81  Identities=17%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCC------CH-HHHHHHHHhCCeEEeCCC----cEEEc-
Q psy16707        336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL------NA-TQVEKLIKEHSVYLTKDG----RISMA-  401 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l------~~-~~v~~Ll~e~~Vy~~p~g----Ris~a-  401 (420)
                      .+.++++++++.+.+.|+++  +.+. ...+ +..|.|+++.+      +. +.++.|+ ++||++.|++    ||++. 
T Consensus       321 ~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-~~~g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~~~iRl~~~~  397 (420)
T 2pb2_A          321 EVLQGIHTKRQQFVQHLQAIDEQFDI-FSDI-RGMGLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAGADVMRFAPSL  397 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCC-EEEE-EEETTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESSTTEEEECCCT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCCC-eEEE-EecceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCCCCEEEEECCC
Confidence            45577888888888888775  3221 1112 34566765432      23 3446665 5899999864    78754 


Q ss_pred             ccCCCCHHHHHHHHHHHh
Q psy16707        402 GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       402 gl~~~ni~~la~AI~~vv  419 (420)
                      ..+.+.++++.++|.+++
T Consensus       398 ~~t~eei~~~~~~l~~~l  415 (420)
T 2pb2_A          398 VVEEADIHEGMQRFAQAV  415 (420)
T ss_dssp             TCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            478899999999988765

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=97.94  E-value=6e-05  Score=76.89  Aligned_cols=100  Identities=13%  Similarity=0.007  Sum_probs=61.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||+..|.+-.+=|  ...|.|.+|.....++ . ..|.+..|..+.+.++++++...... -..++|         
T Consensus        63 G~~ylD~~~~~~~~~lG--h~~p~v~~A~~~~~~~-~-~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v---------  128 (453)
T 4ffc_A           63 GNSFIDLGAGIAVTTVG--ASHPAVAAAIADQATH-F-THTCFMVTPYEQYVQVAELLNALTPG-DHDKRT---------  128 (453)
T ss_dssp             SCEEEESSHHHHTCTTC--TTCHHHHHHHHHHHHH-C-SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCEEE---------
T ss_pred             CCEEEEcCCCcccCcCC--CCCHHHHHHHHHHHHh-c-cccccCcCCCHHHHHHHHHHHHhCCC-CCCcEE---------
Confidence            45679999886656666  3356666665554433 2 34666666666666666665221100 012334         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG  286 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~  286 (420)
                                   +.|.|||.|+..++.+...... ++.|++.+|+|.
T Consensus       129 -------------~~~~sGseA~~~alk~a~~~~g-~~~ii~~~~~yh  162 (453)
T 4ffc_A          129 -------------ALFNSGAEAVENAIKVARLATG-RPAVVAFDNAYH  162 (453)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCC
T ss_pred             -------------EEeCcHHHHHHHHHHHHHHhcC-CCEEEEEcCccC
Confidence                         6699999999998865433223 588998888886

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=97.94  E-value=0.00011  Score=72.08  Aligned_cols=87  Identities=15%  Similarity=0.171  Sum_probs=67.4

Q ss_pred             CCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeeccc
Q psy16707        177 PYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGIS  256 (420)
Q Consensus       177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~g  256 (420)
                      ++..+.|+++.......   ..|.+..+..+|++++++++ |.+       .+                      +.+.|
T Consensus        12 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~----------------------~~~~s   58 (367)
T 3nyt_A           12 ARIKDKIDAGIQRVLRH---GQYILGPEVTELEDRLADFV-GAK-------YC----------------------ISCAN   58 (367)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCCSSCHHHHHHHHHHHHHH-TCS-------EE----------------------EEESC
T ss_pred             cccCHHHHHHHHHHHhc---CCccCChHHHHHHHHHHHHh-CCC-------cE----------------------EEeCC
Confidence            35667777777766543   35677788999999999976 322       22                      67899


Q ss_pred             chHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        257 GTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       257 Gtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      ||.|+.+++..+ .+.| ||.|++++|+|+.+...++..|++
T Consensus        59 Gt~al~~al~~~-~~~~-gd~Vi~~~~~~~~~~~~~~~~G~~   98 (367)
T 3nyt_A           59 GTDALQIVQMAL-GVGP-GDEVITPGFTYVATAETVALLGAK   98 (367)
T ss_dssp             HHHHHHHHHHHT-TCCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHh-CCCC-cCEEEECCCccHHHHHHHHHcCCE
Confidence            999999988644 2457 999999999999999999888875

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=97.92  E-value=3e-05  Score=78.11  Aligned_cols=112  Identities=13%  Similarity=0.143  Sum_probs=90.1

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      ++....+..|+++|..+...+...|.+..     .++++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..+
T Consensus       311 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  381 (449)
T 3qgu_A          311 DWNRVMTTCFNGASNIVQAGGLACLQPEG-----LKEMNAMIKFYKENAQILKTTFTEMG----FSVYGGDDAPYIWVGF  381 (449)
T ss_dssp             HHHHHHHHSCCCCCHHHHHHHHHHTSHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTT----CCEEESSSSSEEEEEC
T ss_pred             HHHHHhhcccCCCCHHHHHHHHHHHhhcC-----HHHHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCeeEEEEEC
Confidence            55566677888999999999999988633     25678889999999999999998863    6777778899998876


Q ss_pred             C----HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 N----ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~----~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .    .+.++.|.++++|++.+.        |  ||++++ +..+|+..+++|.++
T Consensus       382 ~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~  436 (449)
T 3qgu_A          382 PGKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEA  436 (449)
T ss_dssp             TTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence            3    455678989999998742        3  677665 889999999999887

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=97.89  E-value=6e-05  Score=75.00  Aligned_cols=111  Identities=13%  Similarity=0.060  Sum_probs=70.0

Q ss_pred             HHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707        154 FKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISI  231 (420)
Q Consensus       154 ~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~  231 (420)
                      ......++..++++|. .|-...+++.+.+.++.....+....+.|.  +..+..++++.+++++ |.+       .+  
T Consensus        14 ~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-------~~--   82 (398)
T 2rfv_A           14 VHAGQQPDPSTGALST-PIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE-RGE-------AG--   82 (398)
T ss_dssp             HHTTCCCCTTTCCSSC-CCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH-TCS-------EE--
T ss_pred             eecCCcCccCCCCcCC-CCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh-CCC-------cE--
Confidence            3333334445788884 233344556666766655221222345555  4556678888888876 421       11  


Q ss_pred             ecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                                          +.+.+|+.|+.+++..+  +.| ||.|++++|+|+.+...+    +..|.+
T Consensus        83 --------------------i~~~sG~~a~~~~l~~~--~~~-gd~vi~~~~~~~~~~~~~~~~~~~~g~~  130 (398)
T 2rfv_A           83 --------------------LATASGISAITTTLLTL--CQQ-GDHIVSASAIYGCTHAFLSHSMPKFGIN  130 (398)
T ss_dssp             --------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEESSSCHHHHHHHHTHHHHTTCE
T ss_pred             --------------------EEECCHHHHHHHHHHHH--hCC-CCEEEEcCCCcccHHHHHHHHHHHcCCE
Confidence                                55778999999888655  457 899999999999988776    666664

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=97.86  E-value=0.00023  Score=72.02  Aligned_cols=96  Identities=15%  Similarity=0.004  Sum_probs=59.2

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      ...||++.|.+-++-|  ...|.|.+|......+ . ..|   .+..++++++++++.... +  ..++|          
T Consensus        57 ~~~iD~~~~~~~~~lg--~~~~~v~~a~~~~~~~-~-~~~---~~~~~~~~~la~~l~~~~-~--~~~~v----------  116 (453)
T 2cy8_A           57 NVYLDFFGGHGALVLG--HGHPRVNAAIAEALSH-G-VQY---AASHPLEVRWAERIVAAF-P--SIRKL----------  116 (453)
T ss_dssp             CEEEESCTTTTSCTTC--BTCHHHHHHHHHHHTT-T-CSS---CSSCHHHHHHHHHHHHHC-T--TCSEE----------
T ss_pred             CEEEECcccHhhcccC--CCCHHHHHHHHHHHHh-C-CCC---CCCCHHHHHHHHHHHhhC-C--CCCEE----------
Confidence            4568999997544555  2566677776665543 2 223   357789999999883322 1  13444          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                                  +.|.||+.|+..++.....+.+ ++.|++++|+|..+
T Consensus       117 ------------~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~  152 (453)
T 2cy8_A          117 ------------RFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGW  152 (453)
T ss_dssp             ------------EEESCHHHHHHHHHHHHHHHHC-CCEEEEECC-----
T ss_pred             ------------EEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCC
Confidence                        5699999999988775211224 57888999999743

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=97.82  E-value=1.1e-05  Score=84.56  Aligned_cols=100  Identities=15%  Similarity=0.216  Sum_probs=79.7

Q ss_pred             HHHHHHHhCChhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH----------
Q psy16707         23 ARIVQEILGDPKLK-----AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA----------   87 (420)
Q Consensus        23 a~iv~~IL~~~~L~-----~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~----------   87 (420)
                      +.++..++....|.     ..|.+.++.|+++++..|..|.+.|. .    .|.+...+.|||.+.+++.          
T Consensus       387 ~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~----~~~~~~~~~g~~~~~~l~~~~~~~~g~~~  461 (533)
T 3f6t_A          387 QQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A----PKDETDTNTHYYSLIDIYRLAEKIYGKEF  461 (533)
T ss_dssp             HHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C----CCCCSTTBCCSEEEEEHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C----CccccCCCceEEEEEehHhhhhhccchHH
Confidence            44444444444554     45778899999999999999999995 2    2777788999999987753          


Q ss_pred             -----------HHHHHHHHhcceEEcC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 -----------TQVEKLIKEHSVYLTK-------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 -----------~qv~~L~~~~~IY~~~-------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                                 +.+.+|.++++||+.+       .|  ||+++++++.+++.++++|.++
T Consensus       462 ~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~  521 (533)
T 3f6t_A          462 RDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLEL  521 (533)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHH
T ss_pred             HHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHH
Confidence                       6677888899999986       45  9999999999999999999876

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=97.81  E-value=9.5e-05  Score=74.92  Aligned_cols=101  Identities=9%  Similarity=-0.027  Sum_probs=61.8

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||+..|.+...-|  ...|.|.+|......+ . ..|.+..|..+.+.++++++.....  ...++|         
T Consensus        43 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v---------  107 (448)
T 3dod_A           43 GKEYYDGFSSVWLNVHG--HRKKELDDAIKKQLGK-I-AHSTLLGMTNVPATQLAETLIDISP--KKLTRV---------  107 (448)
T ss_dssp             SCEEEETTHHHHTCSSC--BSCHHHHHHHHHHHTT-C-SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEE---------
T ss_pred             CCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh-c-cCccccccCCHHHHHHHHHHHHhCC--CCCCEE---------
Confidence            34578998887666666  3456777776665543 3 3355566777777777777633221  112344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhc--CCC---CCEEEEcCCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPG---EKVIYVPTPTWGN  287 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~---gd~VlvpdP~w~n  287 (420)
                                   +.|.|||.|+..++.++...  .++   +|.|++++|+|..
T Consensus       108 -------------~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg  148 (448)
T 3dod_A          108 -------------FYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHG  148 (448)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----
T ss_pred             -------------EEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCC
Confidence                         66999999999988765432  031   4999999999953

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=97.79  E-value=2.5e-05  Score=76.92  Aligned_cols=113  Identities=15%  Similarity=0.132  Sum_probs=86.0

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      ..++...+....++|..+..++...|.+.+   .|   ++.+++|++.+|+.|.+.|++.   ..|..+..+.|+|.+..
T Consensus       273 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~  343 (407)
T 3nra_A          273 ARMEKLQAIVSLRAAGYSQAVLRGWFDEAP---GW---MEDRIARHQAIRDELLHVLRGC---EGVFARTPQAGSYLFPR  343 (407)
T ss_dssp             HHHHHHHHHHTSSSCHHHHGGGGGTTCCCT---TH---HHHHHHHHHHHHHHHHHHHHTS---TTCBCCCCSBSSEECCB
T ss_pred             HHHHHHHhhhccCCChHHHHHHHHHHhccc---hH---HHHHHHHHHHHHHHHHHHHhcC---CCceeccCCeeEEEEEe
Confidence            455666666667777788888888887532   23   5567788899999999999875   23677777888999886


Q ss_pred             CCH------HHHHHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNA------TQVEKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~------~qv~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +..      +.++.|+++++|++.+.+          ||+++. +..+|+..+++|.++
T Consensus       344 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~  401 (407)
T 3nra_A          344 LPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTL  401 (407)
T ss_dssp             CCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHH
Confidence            654      556778888999987532          899986 889999999988775

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=97.78  E-value=0.00026  Score=72.05  Aligned_cols=100  Identities=11%  Similarity=0.021  Sum_probs=63.5

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||+..|.+-.+-|  ...|.|.+|.....++ . ..|.+..|..+.+.++++++..... .-..++|         
T Consensus        60 g~~ylD~~~~~~~~~lG--h~~p~v~~A~~~~~~~-~-~~~~~~~~~~~~~~~la~~l~~~~~-~~~~~~v---------  125 (451)
T 3oks_A           60 GNRLIDLGSGIAVTTVG--NSAPKVVEAVRSQVGD-F-THTCFMVTPYEGYVAVCEQLNRLTP-VRGDKRS---------  125 (451)
T ss_dssp             SCEEEESSHHHHTCTTC--TTCHHHHHHHHHHHTT-C-SCCTTTTSCCHHHHHHHHHHHHHSS-CCSSEEE---------
T ss_pred             CCEEEEcCCCccccccC--CCCHHHHHHHHHHHHh-c-ccccCCccCCHHHHHHHHHHHHhCC-cCCCCEE---------
Confidence            34578999886655666  3456666666655543 3 3476666777777777776632210 0012334         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCC
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWG  286 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~  286 (420)
                                   +.|.|||.|+..++.+...+.. .+.|++.+|+|.
T Consensus       126 -------------~~~~sGseA~~~Alk~a~~~~g-~~~ii~~~~~yh  159 (451)
T 3oks_A          126 -------------ALFNSGSEAVENAVKIARSHTH-KPAVVAFDHAYH  159 (451)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCC
T ss_pred             -------------EEeCcHHHHHHHHHHHHHHhcC-CCeEEEEcCCcC
Confidence                         5699999999998865543323 588999888886

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=97.76  E-value=0.00018  Score=72.78  Aligned_cols=81  Identities=16%  Similarity=0.220  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC--C--cEEEc-c
Q psy16707        336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD--G--RISMA-G  402 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~--g--Ris~a-g  402 (420)
                      .+.++++++++.+.+.|+++  +.+.  ....+..|.|.++.+     +. +.++.|+ +.||++.|+  +  ||+++ .
T Consensus       333 ~~~~~~~~~~~~l~~~L~~l~~~~~~--~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~iRi~~~~~  409 (433)
T 1z7d_A          333 KLCENAEKLGGPFLENLKRELKDSKI--VRDVRGKGLLCAIEFKNELVNVLDICLKLK-ENGLITRDVHDKTIRLTPPLC  409 (433)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEETTEEEEEECTTTCCHHHHHHHHH-HTTEECCEETTTEEEECCCTT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEeeeeEEEEEEccChhHHHHHHHHHH-HCCeEEecCCCCEEEEECCcC
Confidence            45577888888888888876  5331  112234577776422     23 3456665 679999884  2  78765 3


Q ss_pred             cCCCCHHHHHHHHHHHh
Q psy16707        403 VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       403 l~~~ni~~la~AI~~vv  419 (420)
                      .++++++++.++|.+++
T Consensus       410 ~t~e~i~~~l~~l~~~l  426 (433)
T 1z7d_A          410 ITKEQLDECTEIIVKTV  426 (433)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            68899999999998764

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=97.72  E-value=0.00029  Score=71.02  Aligned_cols=81  Identities=11%  Similarity=0.130  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCCCCcccCCCCceEEecCCC-----H-----HHHHHHHHhCCeEEeCCC---cEEEc
Q psy16707        336 GMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGLN-----A-----TQVEKLIKEHSVYLTKDG---RISMA  401 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g-~~~~w~~i~~q~GmF~~~~l~-----~-----~~v~~Ll~e~~Vy~~p~g---Ris~a  401 (420)
                      .+.++++++++.+.+.|++++ .+  .....+..|+|.|+.+.     .     +.++.|+ +.||++.|+|   ||++.
T Consensus       349 ~~~~~~~~~~~~l~~~L~~l~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~iRis~~  425 (449)
T 3a8u_X          349 NLVQSVAEVAPHFEKALHGIKGAK--NVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGGDTLQFGPT  425 (449)
T ss_dssp             THHHHHHHHHHHHHHHHHTTTTST--TEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEETTEEEECCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCC--CeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCCCEEEEECC
Confidence            456788888899999998754 22  11112356777775331     1     4556775 5699999864   78754


Q ss_pred             -ccCCCCHHHHHHHHHHHh
Q psy16707        402 -GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       402 -gl~~~ni~~la~AI~~vv  419 (420)
                       ..+.++++++.++|.+++
T Consensus       426 ~~~t~~~i~~~l~~l~~~l  444 (449)
T 3a8u_X          426 FNSKPQDLDRLFDAVGEVL  444 (449)
T ss_dssp             TTCCHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHH
Confidence             578899999999998875

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=97.72  E-value=0.00046  Score=71.03  Aligned_cols=103  Identities=16%  Similarity=0.022  Sum_probs=67.0

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||+..|.|-.+=|  ...|.|.+|.....++ ..+.|. ..|..+.+.++++++.....  ...++|         
T Consensus        53 G~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~-~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~~~v---------  117 (476)
T 3i5t_A           53 GRRLIDGPAGMWCAQVG--YGRREIVDAMAHQAMV-LPYASP-WYMATSPAARLAEKIATLTP--GDLNRI---------  117 (476)
T ss_dssp             CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-CCCCCT-TTCBCHHHHHHHHHHHTTSS--TTCCEE---------
T ss_pred             CCEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-ccCccc-CccCCHHHHHHHHHHHhcCC--CCcCEE---------
Confidence            45578988887666666  3456666666555443 333333 36778888888888855431  112344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhc-----CCCCCEEEEcCCCCCCcH
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----FPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----~p~gd~VlvpdP~w~ny~  289 (420)
                                   +.+.||+.|+..++.++...     .+.++.|++.+|+|..+.
T Consensus       118 -------------~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~  160 (476)
T 3i5t_A          118 -------------FFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGST  160 (476)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred             -------------EEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCC
Confidence                         56999999999988766443     032678999999886443

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=97.69  E-value=0.00019  Score=73.92  Aligned_cols=103  Identities=11%  Similarity=0.045  Sum_probs=64.5

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||+.-|.|-.+-|  ...|.|.+|.....++ ..+.|.+..+..+.+.++++.+.....  ...++|         
T Consensus        54 G~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v---------  119 (472)
T 3hmu_A           54 GEEILDAMAGLWCVNIG--YGRDELAEVAARQMRE-LPYYNTFFKTTHVPAIALAQKLAELAP--GDLNHV---------  119 (472)
T ss_dssp             CCEEECTTHHHHTCTTC--BCCHHHHHHHHHHHHH-CSCCCSSSSEECHHHHHHHHHHHHHSC--TTEEEE---------
T ss_pred             CCEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHHhCC--CCCCEE---------
Confidence            45678998887666667  3456666666554433 445566655665666666655522210  112344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcC-----CCCCEEEEcCCCCCCc
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFF-----PGEKVIYVPTPTWGNH  288 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~-----p~gd~VlvpdP~w~ny  288 (420)
                                   +.+.||+.|+..++.++..+.     |.++.|++.+|+|..|
T Consensus       120 -------------~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~  161 (472)
T 3hmu_A          120 -------------FFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGS  161 (472)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCS
T ss_pred             -------------EEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCc
Confidence                         569999999999887665431     2268899999888644

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=97.64  E-value=0.00056  Score=68.53  Aligned_cols=98  Identities=14%  Similarity=0.052  Sum_probs=59.5

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...+|+.-|.+-++-|  ...|.|.+|.....++.....| |.....++.+.+++++-+       .++|         
T Consensus        52 g~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~~-------~~~v---------  112 (429)
T 4e77_A           52 GKAYIDYVGSWGPMILG--HNHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVPT-------MDMV---------  112 (429)
T ss_dssp             CCEEEESSGGGTTCTTC--BTCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHSTT-------CSEE---------
T ss_pred             CCEEEECCCchhccccC--CCCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCCC-------CCEE---------
Confidence            45678998887666666  3466677776665543222233 444455666666665421       2344         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                                   +.|.|||.|+..++.+...+.+ ++.|++.+|+|..+.
T Consensus       113 -------------~~~~sGsea~~~al~~a~~~~~-~~~ii~~~~~yhg~~  149 (429)
T 4e77_A          113 -------------RMVNSGTEATMSAIRLARGYTG-RDKIIKFEGCYHGHA  149 (429)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCC--
T ss_pred             -------------EEeCcHHHHHHHHHHHHHHhhC-CCEEEEEcCccCCCC
Confidence                         5699999999988764433334 578888877775443

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=97.64  E-value=0.00049  Score=68.83  Aligned_cols=80  Identities=13%  Similarity=0.220  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCCCceEEecCCC-----------------H-HHHHHHHHhCCeEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKE----GSNKPWNHITDQIGMFCYTGLN-----------------A-TQVEKLIKEHSVYL  392 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q~GmF~~~~l~-----------------~-~~v~~Ll~e~~Vy~  392 (420)
                      +.+.++++++++.+.+.|+++    +    +....+..|.|.|+.+.                 . +.++.|+ ++||++
T Consensus       320 ~~~~~~~~~~~~~l~~~L~~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v  394 (424)
T 2e7u_A          320 PGYYAYLEDLGARLEAGLKEVLKEKG----LPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYW  394 (424)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHTT----CCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEEC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEE
Confidence            345677777788888777764    4    32223456777765332                 1 3445665 799999


Q ss_pred             eCCC--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        393 TKDG--RISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       393 ~p~g--Ris~a-gl~~~ni~~la~AI~~vv  419 (420)
                      .|++  |+.++ ..+++.++.+.++|.+++
T Consensus       395 ~~~~~~~~~~~~~~t~~~i~~~l~~l~~~l  424 (424)
T 2e7u_A          395 PPSNFEAAFLSVAHREEDVEKTLEALRKAL  424 (424)
T ss_dssp             CSSSSSCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             eccCCCceEeeccCCHHHHHHHHHHHHHhC
Confidence            9976  43332 367888999999988764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=97.64  E-value=0.00019  Score=71.44  Aligned_cols=121  Identities=17%  Similarity=0.116  Sum_probs=86.4

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGD--PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~--~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      ..++...+....+++..+..++...|.+  ..+.+.+.+..+.+++|...+++.|.+.|...++  .+.....+.|||.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~--~~~~~~p~~g~~~~  349 (423)
T 3ez1_A          272 RWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGE--YATWTLPKGGYFIS  349 (423)
T ss_dssp             HHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS--SEEECCCSBSSCEE
T ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCC--ceEEeCCCccEEEE
Confidence            4455556666778888999999999987  5555555555555666666666666655543321  24444567899988


Q ss_pred             cCC---CHHHHHHHHHhcceEEcCCC--------------ceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGL---NATQVEKLIKEHSVYLTKDG--------------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL---~~~qv~~L~~~~~IY~~~~G--------------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ..+   +.+++..+-++++|++.+.|              ||+++.++..+|+..+++|.++
T Consensus       350 ~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~  411 (423)
T 3ez1_A          350 LDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAAC  411 (423)
T ss_dssp             EEESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred             EECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            765   56788877789999998722              8999888999999999988776

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=97.59  E-value=0.00047  Score=68.90  Aligned_cols=119  Identities=13%  Similarity=0.065  Sum_probs=80.8

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccccccccceee
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGD-PKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~-~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~-~~~~~w~~i~~Q~GmFs~   82 (420)
                      ..+....+....+++..+..++...|.+ ..+    .+.++.++++++..|..+.+.|++. ..-+.+.....+.|||.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~  354 (427)
T 3ppl_A          279 KWYTGHAGIRGIGPNKVNQLAHARYFGDAEGV----RAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFIS  354 (427)
T ss_dssp             HHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEE
T ss_pred             HHHHHHhhcccCCCCHHHHHHHHHHHhChhhH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEE
Confidence            3455555666778888899999999998 334    3444445555555555555555431 111234555667899998


Q ss_pred             cCCC---HHHHHHHHHhcceEEcCCC--------------ceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLN---ATQVEKLIKEHSVYLTKDG--------------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~---~~qv~~L~~~~~IY~~~~G--------------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ..+.   .+++..+-.+++|++.+.|              ||+++..+..+|+..+++|.++
T Consensus       355 ~~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~  416 (427)
T 3ppl_A          355 LDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATC  416 (427)
T ss_dssp             EECSTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred             EECCcchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            8775   6676666678899998732              9999888889999998888775

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=97.59  E-value=0.00019  Score=69.31  Aligned_cols=82  Identities=13%  Similarity=0.080  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccc-CC--CCceEEecCCCH-----HHHHHHHHhCCeEEeCC----C--cE
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPW-NHI-TD--QIGMFCYTGLNA-----TQVEKLIKEHSVYLTKD----G--RI  398 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w-~~i-~~--q~GmF~~~~l~~-----~~v~~Ll~e~~Vy~~p~----g--Ri  398 (420)
                      ++.++++++++|+.+.+.|++++  + + ... .+  +.|+|.|+.++.     +.+++| .++||.+.|+    +  ||
T Consensus       260 ~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~~iRi  335 (360)
T 1w23_A          260 AEAIAKQNEEKAKIIYDTIDESN--G-FYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNGHRSVGGCRA  335 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTT--T-SSEESSCGGGBCSSEEEEECSSHHHHHHHHHHH-HHTTEESCBCCTTTCSEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcc--C-cccccCCchhccCcEEEEEcCCCccHHHHHHHH-HHCCeeeecCCCCCCeEEE
Confidence            66778999999999999999865  1 3 322 12  357677765542     334554 5789999875    2  99


Q ss_pred             EEccc-CCCCHHHHHHHHHHHh
Q psy16707        399 SMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       399 s~agl-~~~ni~~la~AI~~vv  419 (420)
                      +++.. +.+.++++.++|.+++
T Consensus       336 s~~~~~~~~~i~~~~~~l~~~~  357 (360)
T 1w23_A          336 SIYNAVPIDACIALRELMIQFK  357 (360)
T ss_dssp             ECCTTSCHHHHHHHHHHHHHHH
T ss_pred             EecCCCCHHHHHHHHHHHHHHH
Confidence            98753 6677999999998864

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=97.54  E-value=0.0012  Score=63.37  Aligned_cols=81  Identities=7%  Similarity=-0.012  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC----CCCceEEecCC--CH-HHHHHHHHhCCeEEeCC------C--c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT----DQIGMFCYTGL--NA-TQVEKLIKEHSVYLTKD------G--R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~----~q~GmF~~~~l--~~-~~v~~Ll~e~~Vy~~p~------g--R  397 (420)
                      ++.+.+++++.++.+.+.|+++ |    +....    ...+++.+..+  +. +.++.|. +.||.+.++      +  |
T Consensus       264 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~~~~g~~~~~~~~iR  338 (362)
T 3ffr_A          264 ADGIRKQTEEKAALINTYIESSKV----FSFGVEDAKLRSMTTIVANTTMLPGEINKILE-PFDMAVGAGYGSKKETQIR  338 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSS----EEESSSCGGGBCSSEEEEEESSCHHHHHHHHG-GGTEEEEECSGGGTTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccC----ceeccCChhhcCCceEEEecCCCHHHHHHHHH-HCCeEEecCccccCCCEEE
Confidence            6778889999999999999987 5    44333    12334443322  44 4556775 459999864      2  9


Q ss_pred             EEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        398 ISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~ag-l~~~ni~~la~AI~~vv  419 (420)
                      ||+.. .+.+.++++.++|+++.
T Consensus       339 is~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          339 IANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHT
T ss_pred             EECCCCCCHHHHHHHHHHHHHHh
Confidence            99864 47788999999998865

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=97.53  E-value=0.0005  Score=68.96  Aligned_cols=79  Identities=5%  Similarity=0.097  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCCCceEEecCCC------------------HHHHHHHHHhCCeEEe
Q psy16707        336 GMADRIISMRQSLKDNLQKE----GSNKPWNHITDQIGMFCYTGLN------------------ATQVEKLIKEHSVYLT  393 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q~GmF~~~~l~------------------~~~v~~Ll~e~~Vy~~  393 (420)
                      .+.++++++++.+.+.|+++    +    +....+..|.|.|+.+.                  .+.++.|+ ++||++.
T Consensus       325 ~~~~~~~~~~~~l~~~L~~~~~~~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~  399 (434)
T 2epj_A          325 PVYSVSREAAKALEEAASEVLDRTG----LPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIA  399 (434)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhCC----CcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEe
Confidence            45567777777777777664    4    22222345677664321                  23445664 7899999


Q ss_pred             CCC--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        394 KDG--RISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       394 p~g--Ris~a-gl~~~ni~~la~AI~~vv  419 (420)
                      |++  |+.++ ..+.+.++++.++|.+++
T Consensus       400 ~~~~~~~~~~~~~t~e~i~~~l~~l~~~l  428 (434)
T 2epj_A          400 PSNLEAVFTGLPHQGEALEIAVEGLRSSL  428 (434)
T ss_dssp             SSTTSCEECCTTCSHHHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEeccCCHHHHHHHHHHHHHHH
Confidence            976  44443 357788999988888764

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=97.53  E-value=0.00031  Score=70.32  Aligned_cols=120  Identities=14%  Similarity=0.048  Sum_probs=88.4

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccccccccceeec
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYT   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q~GmFs~~   83 (420)
                      ..++...+....++|..+..++...|.++   ..|.+.++.++++++..|..|.+.|++.-.. +.|..+..+.|+|.+.
T Consensus       277 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~  353 (422)
T 3d6k_A          277 EWYASHANVRGIGPNKLNQLAHAQFFGDV---AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISV  353 (422)
T ss_dssp             HHHHHHHHHHCSCCCHHHHHHHHHHHCSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEE
T ss_pred             HHHHHHHHhhcCCCCHHHHHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEE
Confidence            34555555555677888888899999973   3567778888888888888888888653211 2355556678999887


Q ss_pred             CCC---HHHHHHHHHhcceEEcCC------------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLN---ATQVEKLIKEHSVYLTKD------------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~---~~qv~~L~~~~~IY~~~~------------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .+.   .+++..+-++++|++.+.            +  |||++..+..+++..+++|.++
T Consensus       354 ~~~~~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~  414 (422)
T 3d6k_A          354 DVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATC  414 (422)
T ss_dssp             EESTTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred             ECCCCCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Confidence            664   567777778899999762            1  8899888889999999988775

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=97.52  E-value=0.00037  Score=68.87  Aligned_cols=118  Identities=10%  Similarity=0.061  Sum_probs=85.9

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~-m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      .+++...+....+++..+..++...|.+.+    |.+.+.. |+++++..|..+.+.|++.-....|.....+.|+|.+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~  344 (417)
T 3g7q_A          269 TAIANMNGIISLAPGGMGPAMMCEMIKRND----LLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWL  344 (417)
T ss_dssp             HHHHHHHHHHCCCCCSHHHHHHHHHHHTTC----HHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEE
T ss_pred             HHHHHhhcceeeCCCcHHHHHHHHHHcCcc----hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEE
Confidence            455555566666788888999999998865    4555554 77788888888888887643322466667788999876


Q ss_pred             -----CCCHHHHHHHHHhcceEEcCC---------------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 -----GLNATQVEKLIKEHSVYLTKD---------------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 -----gL~~~qv~~L~~~~~IY~~~~---------------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                           |++.+++...-.+++|++.+.               +  |||++. +..+|+..+++|.++
T Consensus       345 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~  409 (417)
T 3g7q_A          345 WFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEE  409 (417)
T ss_dssp             ECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHH
T ss_pred             EcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence                 566777655447889998641               1  899986 888999999888765

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=97.51  E-value=7.1e-05  Score=77.27  Aligned_cols=102  Identities=16%  Similarity=0.072  Sum_probs=64.4

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHH---HccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIV---LNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~---~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      +.|+|++|.  |+++  ++++.|.+|....   ..+...+.|. ..|.+ +++++++++-...+.    +.+        
T Consensus        90 ~~i~l~~g~--~~~~--~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~--------  151 (464)
T 1ibj_A           90 LLVNLDNKF--DPFD--AMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRA--------  151 (464)
T ss_dssp             HHTCCCCSS--CTTC--CSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEE--------
T ss_pred             eEEECCCCC--CCCC--CCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeE--------
Confidence            578999983  5666  4455555554321   0123457787 56877 677777766221111    122        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~  298 (420)
                                    +.+.||+.|+..++.   .+.| ||.|++++|+|+.|...    ++..|++
T Consensus       152 --------------i~~~sGt~al~~~l~---~~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~  198 (464)
T 1ibj_A          152 --------------FCFTSGMAALSAVTH---LIKN-GEEIVAGDDVYGGSDRLLSQVVPRSGVV  198 (464)
T ss_dssp             --------------EEESSHHHHHHHHHT---TSCT-TCEEEEESSCCHHHHHHHHHTSGGGTCE
T ss_pred             --------------EEECCHHHHHHHHHH---HhCC-CCEEEEECCCchhHHHHHHHHHHHcCCE
Confidence                          567888999877654   3457 99999999999999764    3445654

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=97.49  E-value=0.0011  Score=66.17  Aligned_cols=81  Identities=11%  Similarity=0.191  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCCCCcccCCCCceEEecCC----CHH-HHHHHHHhCCeEEeCCC---cEEEc-ccCC
Q psy16707        336 GMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKDG---RISMA-GVTS  405 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g-~~~~w~~i~~q~GmF~~~~l----~~~-~v~~Ll~e~~Vy~~p~g---Ris~a-gl~~  405 (420)
                      .+.++++++|+.+.+.|++++ .++ +.. .+..|.|.|+.+    +.+ .++.|+ ++||++.|.+   |||+. ..+.
T Consensus       331 ~~~~~~~~~~~~l~~~L~~l~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~~iRis~~~~~t~  407 (429)
T 1s0a_A          331 DWQQQVADIEVQLREQLAPARDAEM-VAD-VRVLGAIGVVETTHPVNMAALQKFFV-EQGVWIRPFGKLIYLMPPYIILP  407 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGGGCTT-EEE-EEEETTEEEEEESSCBCHHHHHHHHH-HTTEECCCBTTEEEECCCTTCCH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCC-EEE-EEEeeEEEEEEECCcccHHHHHHHHH-HCCCEEeccCCEEEEECCCCCCH
Confidence            355778888999999998763 221 222 234577776532    344 446665 7899998853   78854 4688


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      ++++++.++|.+++
T Consensus       408 e~i~~~~~~l~~~~  421 (429)
T 1s0a_A          408 QQLQRLTAAVNRAV  421 (429)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998875

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=97.48  E-value=7.2e-05  Score=74.65  Aligned_cols=118  Identities=13%  Similarity=0.097  Sum_probs=87.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCC-c
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQW-------LTEVKGMADRIISMRQSLKDNLQKEG------SNKPW-N   71 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W-------~~el~~m~~Ri~~~R~~l~~~L~~~~------~~~~w-~   71 (420)
                      +|..+.....+++|..+..++...|.+..   +|       .+.++.|+++++..|+.|.+.|++.+      ..+.+ .
T Consensus       239 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~  315 (391)
T 3bwn_A          239 KMVEYIIVNSIGVSKESQVRTAKILNVLK---ETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCN  315 (391)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHHH---HHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEET
T ss_pred             HHHHHhcccccCCCHHHHHHHHHHHhCcc---hhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc
Confidence            44444444567888888888888887653   34       55688899999999999999998762      01111 1


Q ss_pred             cc---cccccceeecCCC-HHHHHHHHHhcceEEcC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         72 HI---TDQIGMFCYTGLN-ATQVEKLIKEHSVYLTK-------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        72 ~i---~~Q~GmFs~~gL~-~~qv~~L~~~~~IY~~~-------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++   ..+.|||.+..+. .+++..+-++++|++.+       .|  |||++. +..+++..+++|.++
T Consensus       316 f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~~~  383 (391)
T 3bwn_A          316 YFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLANM  383 (391)
T ss_dssp             TTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHHSC
T ss_pred             cccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHH
Confidence            11   3578999998886 45677777889999975       55  999997 788899999998876

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=97.48  E-value=0.0012  Score=66.73  Aligned_cols=99  Identities=11%  Similarity=0.006  Sum_probs=63.1

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      +...||++.|.+-++-|  ...|.|.+|......+ ..+  .+..+..+.+.++++++......  ..+ |         
T Consensus        48 g~~~lD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~--~~~~~~~~~~~~la~~l~~~~~~--~~~-v---------  110 (452)
T 3n5m_A           48 GKRYLDGMSGLWCVNSG--YGRKELAEAAYKQLQT-LSY--FPMSQSHEPAIKLAEKLNEWLGG--EYV-I---------  110 (452)
T ss_dssp             CCEEEETTHHHHTCTTC--BCCHHHHHHHHHHHTT-CCC--CCTTSEEHHHHHHHHHHHHHHTS--CEE-E---------
T ss_pred             CCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh-cCC--cccccCCHHHHHHHHHHHHhCCC--Cce-E---------
Confidence            45679999986656667  3466777776665543 333  33455556666666655221110  112 3         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhc---C---CCCCEEEEcCCCCCCc
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF---F---PGEKVIYVPTPTWGNH  288 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~---~---p~gd~VlvpdP~w~ny  288 (420)
                                   +.|.|||.|+..++.++..+   .   + ++.|++.+|+|..|
T Consensus       111 -------------~~~~ggseA~~~al~~~~~~~~~~g~~~-~~~vi~~~~~yhg~  152 (452)
T 3n5m_A          111 -------------FFSNSGSEANETAFKIARQYYAQKGEPH-RYKFMSRYRGYHGN  152 (452)
T ss_dssp             -------------EEESSHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEETTCCCCS
T ss_pred             -------------EEeCchHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCcCCC
Confidence                         67999999999988766533   3   5 79999999998643

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=97.48  E-value=0.0022  Score=64.63  Aligned_cols=81  Identities=15%  Similarity=0.126  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEE---e-cCCCH-HHHHHHHHhCCeEE--eCC-----C--c
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFC---Y-TGLNA-TQVEKLIKEHSVYL--TKD-----G--R  397 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~---~-~~l~~-~~v~~Ll~e~~Vy~--~p~-----g--R  397 (420)
                      .++.+.+++.+.++.+.+.|+++ |    ++...+ ..+|.   + .+.+. +.+++|. ++||.+  .++     +  |
T Consensus       341 g~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~~~~~~lR  414 (438)
T 1wyu_A          341 GLREVALKSVEMAHKLHALLLEVPG----VRPFTP-KPFFNEFALALPKDPEAVRRALA-ERGFHGATPVPREYGENLAL  414 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSTT----CEECSC-SSBCSEEEEECSSCHHHHHHHHH-HTTCCCCEECCTTSCSSEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCC----eEECCC-CCeEEEEEEeCCCCHHHHHHHHH-HCCceeccccccccCCCeEE
Confidence            36778889999999999999987 6    454433 23433   2 23344 4456665 669998  442     3  8


Q ss_pred             EEEccc-CCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl-~~~ni~~la~AI~~vv  419 (420)
                      |++... +.++++++.++|.+++
T Consensus       415 is~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          415 FAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHC
T ss_pred             EEecccCCHHHHHHHHHHHHHHh
Confidence            888743 5668999999998864

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=97.46  E-value=0.00045  Score=69.06  Aligned_cols=80  Identities=13%  Similarity=0.097  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHhcC--CCCCCcccCCCCceEEecCC-------------CHHHHHHHHHhCCeEEeCC------
Q psy16707        337 MADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGL-------------NATQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g--~~~~w~~i~~q~GmF~~~~l-------------~~~~v~~Ll~e~~Vy~~p~------  395 (420)
                      +.++++++|+.+.+.|++++  .+  +....+..|+|.|+.+             ..+.++.|+ +.||++.|+      
T Consensus       326 ~~~~~~~~~~~l~~~l~~l~~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~  402 (433)
T 1zod_A          326 LVARANVMGDRLRRGLLDLMERFD--CIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMG  402 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCT--TEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCC
Confidence            45677777778877777652  22  1112345577776422             123456665 789999874      


Q ss_pred             C--cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        396 G--RISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 g--Ris~a-gl~~~ni~~la~AI~~vv  419 (420)
                      +  ||+++ ..+.++++.+.++|.+++
T Consensus       403 ~~lRi~~~~~~t~~~i~~~l~~l~~~l  429 (433)
T 1zod_A          403 GVFRIAPPLTVSEDEIDLGLSLLGQAI  429 (433)
T ss_dssp             CEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence            3  77654 467889999999988765

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=97.46  E-value=0.0013  Score=65.33  Aligned_cols=91  Identities=14%  Similarity=0.186  Sum_probs=52.3

Q ss_pred             CCCCchHHHHHHHHHHHccCCCCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcccccccccccee
Q psy16707        175 GKPYVLPSVKQADEIVLNKNLDKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIV  252 (420)
Q Consensus       175 g~~~~~~~V~~a~~~~~~~~~~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v  252 (420)
                      ..+++.+.+.++.....+....+.|.  +.....++++.+++++ |.+       ..                      +
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~-g~~-------~~----------------------i   84 (398)
T 1gc0_A           35 TATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLE-GGE-------AG----------------------L   84 (398)
T ss_dssp             CSCBCCC---------------------CCHHHHHHHHHHHHHH-TCS-------EE----------------------E
T ss_pred             CCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHh-CCC-------cE----------------------E
Confidence            34566777777765332222345555  5556778899998876 422       11                      5


Q ss_pred             ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                      .+.+||.|+..++..+  +.| ||.|++++|+|+.+...+    +..|++
T Consensus        85 ~~~sG~~a~~~~l~~~--~~~-gd~vl~~~~~~~~~~~~~~~~~~~~g~~  131 (398)
T 1gc0_A           85 ALASGMGAITSTLWTL--LRP-GDEVLLGNTLYGCTFAFLHHGIGEFGVK  131 (398)
T ss_dssp             EESSHHHHHHHHHHHH--CCT-TCEEEEESSCCSHHHHHHHHTGGGGTCE
T ss_pred             EECCHHHHHHHHHHHH--hcC-CCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence            6788899999888755  457 899999999999988766    445553

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=97.44  E-value=4.7e-05  Score=76.92  Aligned_cols=125  Identities=17%  Similarity=0.133  Sum_probs=83.2

Q ss_pred             ccccCCChHHHHHHHHH--ccCCCCceeecccc-cccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFK--KDTNVNKINLGVGA-YRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL  215 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~-y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~  215 (420)
                      +..+.+.+++...+..+  +..+.++++|..|. |.|-....++ +.|+++....... ....|.+..|..+|+++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~-~~~~y~~~~~~~~l~~~la~~   88 (467)
T 1ax4_A           11 IKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMIT-GDEAYAGSRNYYDLKDKAKEL   88 (467)
T ss_dssp             EEEEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHT-CCCCSSSCHHHHHHHHHHHHH
T ss_pred             hceeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhh-cccccccCccHHHHHHHHHHH
Confidence            44444554443333221  23467889999985 6666555555 5666655444332 345798888999999999998


Q ss_pred             HcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc--CCCCCE---EEEcCCCCCCcHH
Q psy16707        216 AYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF--FPGEKV---IYVPTPTWGNHIP  290 (420)
Q Consensus       216 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~--~p~gd~---VlvpdP~w~ny~~  290 (420)
                      + |.+       +|                      +.|.|||.|+.+++..+...  .| ||.   |++++|.|+.+..
T Consensus        89 ~-~~~-------~v----------------------~~t~ggt~A~~~al~~~~~~~~~~-Gd~~~~viv~~~~~~~~~~  137 (467)
T 1ax4_A           89 F-NYD-------YI----------------------IPAHQGRGAENILFPVLLKYKQKE-GKAKNPVFISNFHFDTTAA  137 (467)
T ss_dssp             H-CCC-------EE----------------------EEESSHHHHHHHHHHHHHHHHHHT-TCCSSCEEEESSCCHHHHH
T ss_pred             c-CCC-------cE----------------------EEcCCcHHHHHHHHHHHHHhhccC-CCccceEEEeccccchhhH
Confidence            7 321       23                      67999999999988755321  06 898   9999999888777


Q ss_pred             HHhhcC
Q psy16707        291 ICKHTG  296 (420)
Q Consensus       291 i~~~aG  296 (420)
                      .++..|
T Consensus       138 ~~~~~g  143 (467)
T 1ax4_A          138 HVELNG  143 (467)
T ss_dssp             HHHHTT
T ss_pred             HHhccC
Confidence            666554

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=97.44  E-value=0.00037  Score=67.47  Aligned_cols=74  Identities=9%  Similarity=0.109  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHHHhc-CCCCCCcc-cCCCCceEEecCC--C----HHHHHHHHHhCCeEEeCC-----C----cEEEcc
Q psy16707        340 RIISMRQSLKDNLQKE-GSNKPWNH-ITDQIGMFCYTGL--N----ATQVEKLIKEHSVYLTKD-----G----RISMAG  402 (420)
Q Consensus       340 r~~~~R~~l~~~L~~~-g~~~~w~~-i~~q~GmF~~~~l--~----~~~v~~Ll~e~~Vy~~p~-----g----Ris~ag  402 (420)
                      ++.++|+.+.+.|+++ |    +.. ..++.+.|.|+.+  .    .+.+...+.++||.+.|+     |    |+++..
T Consensus       260 ~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~  335 (357)
T 3lws_A          260 QYYEQAKQLAEQFNALPG----VHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGD  335 (357)
T ss_dssp             HHHHHHHHHHHHHHTSTT----EEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCT
T ss_pred             HHHHHHHHHHHHHHhCCC----CeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecc
Confidence            4577788899999886 4    444 3456777777533  2    344545557899999876     2    666542


Q ss_pred             c-CCCCHHHHHHHHHH
Q psy16707        403 V-TSKNVGYLAKAIHA  417 (420)
Q Consensus       403 l-~~~ni~~la~AI~~  417 (420)
                      - .....+.+.+++++
T Consensus       336 ~~~~~~~~~l~~al~~  351 (357)
T 3lws_A          336 AYGELDQQTRDAGFAR  351 (357)
T ss_dssp             TGGGSCHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHH
Confidence            1 11345555555544

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=97.43  E-value=0.00014  Score=72.15  Aligned_cols=117  Identities=15%  Similarity=0.116  Sum_probs=85.2

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLK-AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~-~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .+....+....++|..+...+...|.++..+ ..|.+.++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~  343 (422)
T 3fvs_A          268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPIIPQGSYFLITD  343 (422)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEE
T ss_pred             HHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEe
Confidence            3444444444556666777777777653322 23556677889999999999999998763    666778999999987


Q ss_pred             CCH------------------HHHHHHHHhcceEEcCC-------------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNA------------------TQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~------------------~qv~~L~~~~~IY~~~~-------------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++.                  +.++.|.++++|++.+.             |  |||++. +..+|+..+++|.++
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~  418 (422)
T 3fvs_A          344 ISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK-DEATLQAMDEKLRKW  418 (422)
T ss_dssp             CHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC-CHHHHHHHHHHHHHH
T ss_pred             chhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence            754                  55777778899998752             2  789887 889999999888765

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=97.43  E-value=0.00039  Score=69.49  Aligned_cols=113  Identities=11%  Similarity=0.132  Sum_probs=84.0

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ...+....+..++++|..+...+...|.+...     +.+++++++++..|+.|.+.|++.+    |..+..+.|+|.++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~  367 (432)
T 3ei9_A          297 AKDFNRIICTCFNGASNISQAGALACLTPEGL-----EAMHKVIGFYKENTNIIIDTFTSLG----YDVYGGKNAPYVWV  367 (432)
T ss_dssp             HHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTT----CCEEECSSSSEEEE
T ss_pred             HHHHHHHhccccCCCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHHHCC----ceecCCCcceEEEE
Confidence            45566666777888999999888888885433     3477789999999999999998863    66666678999888


Q ss_pred             CCC----HHHHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         84 GLN----ATQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        84 gL~----~~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                      .+.    .+.++.|.++++|++.+        .|  |||++. +..+|+...+.|.+
T Consensus       368 ~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~rl~~  423 (432)
T 3ei9_A          368 HFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRRFKQ  423 (432)
T ss_dssp             ECTTSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHH
T ss_pred             ECCCCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence            763    45678888899999864        23  677643 66666666666543

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=97.41  E-value=0.00013  Score=71.90  Aligned_cols=117  Identities=9%  Similarity=0.014  Sum_probs=83.4

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGD-PKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~-~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .++...+....++|..+...+...|.+ ......|.+.++.++++++..|+.|.+.|++.    .|..+..+.|+|.+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~  336 (410)
T 3e2y_A          261 HLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV----GLKPIVPDGGYFIIAD  336 (410)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT----TCEEEBCSBSSEEEEE
T ss_pred             HHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCccEEEEEE
Confidence            444444554555666677777777653 22223456678889999999999999999876    3666778999998764


Q ss_pred             CCH----------------HHHHHHHHhcceEEcCCC---------------ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNA----------------TQVEKLIKEHSVYLTKDG---------------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~----------------~qv~~L~~~~~IY~~~~G---------------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +..                +.+++|.++++|++.+.+               ||+++. +..+|+..+++|.++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-~~e~l~~~l~~l~~~  409 (410)
T 3e2y_A          337 VSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK-KDSTLDAAEEIFRAW  409 (410)
T ss_dssp             CGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC-CHHHHHHHHHHHHTC
T ss_pred             chhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHhc
Confidence            432                667778889999986422               688765 888888888887654

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=97.37  E-value=0.00044  Score=69.33  Aligned_cols=105  Identities=18%  Similarity=0.368  Sum_probs=80.3

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH--------
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA--------   87 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~--------   87 (420)
                      .+++.....++..+|.+.+...+   .++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..+..        
T Consensus       303 ~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~l~~~~~~~~~~  375 (435)
T 3piu_A          303 GLVSSQTQHLLSAMLSDKKLTKN---YIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTFE  375 (435)
T ss_dssp             SCCCHHHHHHHHHHHHCHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSSSHH
T ss_pred             CCCCHHHHHHHHHHhcChHHHHH---HHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEEcccccccCCch
Confidence            34444566777888887654333   456788999999999999998763    667777888999887753        


Q ss_pred             ---HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 ---TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ---~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                         +.+++|.++++|++.+.        +  ||+++.++..+|+..+++|.++
T Consensus       376 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~  428 (435)
T 3piu_A          376 AEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF  428 (435)
T ss_dssp             HHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHH
Confidence               55678888889998641        2  8999878999999999998876

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=97.37  E-value=0.0012  Score=67.65  Aligned_cols=82  Identities=13%  Similarity=0.110  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CHH-HHHHHHHhCCeEEeCCC---cEEEc-ccCCC
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKDG---RISMA-GVTSK  406 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~~-~v~~Ll~e~~Vy~~p~g---Ris~a-gl~~~  406 (420)
                      .+.++++++++.+.+.|+++.. .+.-...+..|+|+++.+    +.. .++.|+ +.||++.|.|   ||+.. ..+.+
T Consensus       360 ~~~~~~~~~~~~l~~~L~~l~~-~~~v~~vr~~G~~~~i~l~~~~~~~~~~~~l~-~~Gv~v~~~~~~lRi~p~~~~t~e  437 (457)
T 3tfu_A          360 DWRTRITELAAGLTAGLDTARA-LPAVTDVRVCGAIGVIECDRPVDLAVATPAAL-DRGVWLRPFRNLVYAMPPYICTPA  437 (457)
T ss_dssp             CHHHHHHHHHHHHHHHHGGGGG-STTEEEEEECSSCEEEEESSCCCHHHHHHHHH-HTTEECCCBTTEEEECCCTTCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CCCeeeeecCCeEEEEEECCcccHHHHHHHHH-HCCeEEEecCCEEEEECCCCCCHH
Confidence            3456677777788888877631 111112345678876532    334 446665 6699999865   77653 35889


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      +++++.++|.+++
T Consensus       438 ei~~~l~~L~~~l  450 (457)
T 3tfu_A          438 EITQITSAMVEVA  450 (457)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998875

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=97.34  E-value=0.00016  Score=72.83  Aligned_cols=101  Identities=17%  Similarity=0.115  Sum_probs=72.2

Q ss_pred             cCCCCceeecccc-cccCCCCC---CchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeee
Q psy16707        157 DTNVNKINLGVGA-YRDDQGKP---YVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIV  232 (420)
Q Consensus       157 d~~~~kInL~iG~-y~d~dg~~---~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~  232 (420)
                      ..+.+.++|+.|. |.|-....   ++.+.+.++..   .  ....|.+..|..+|++++++++ |.+       .+   
T Consensus        30 ~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~---~--~~~~y~~~~~~~~l~~~la~~~-~~~-------~~---   93 (456)
T 2ez2_A           30 EAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM---M--GDEAYAGSENFYHLERTVQELF-GFK-------HI---   93 (456)
T ss_dssp             HTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT---T--CCCCSSSCHHHHHHHHHHHHHH-CCS-------EE---
T ss_pred             HCCCCcccCCcccceeeeccccCCccCCHHHHHHhh---c--chhhcccChhHHHHHHHHHHHh-CCC-------cE---
Confidence            3566789999985 66543322   33455554432   1  3457988889999999999987 322       22   


Q ss_pred             cccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCC-CCcHHHHhhcCc
Q psy16707        233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTW-GNHIPICKHTGL  297 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w-~ny~~i~~~aG~  297 (420)
                                         +.|.|||.|+.+++..+  +.| ||  ++++|+| +.|...++.+|+
T Consensus        94 -------------------~~~~~gt~a~~~al~~l--~~~-gd--i~~~~~~~~~~~~~~~~~G~  135 (456)
T 2ez2_A           94 -------------------VPTHQGRGAENLLSQLA--IKP-GQ--YVAGNMYFTTTRYHQEKNGA  135 (456)
T ss_dssp             -------------------EEESSHHHHHHHHHHHH--CCT-TC--EEEESSCCHHHHHHHHHTTC
T ss_pred             -------------------EEeCCcHHHHHHHHHHh--CCC-CC--EeccccccchhHHHHHHcCC
Confidence                               67999999999988755  557 88  8899999 888877777665

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=97.23  E-value=0.00033  Score=69.54  Aligned_cols=87  Identities=11%  Similarity=0.075  Sum_probs=64.8

Q ss_pred             CCCchHHHHHHHHHHHccCCCCCCCCCCC--CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceee
Q psy16707        176 KPYVLPSVKQADEIVLNKNLDKEYAPIIG--APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQ  253 (420)
Q Consensus       176 ~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vq  253 (420)
                      .|...+.|.++.......    .|.+..|  .++|++++++++ |.       +.|                      +.
T Consensus         7 ~p~~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~-~~-------~~v----------------------~~   52 (394)
T 1o69_A            7 PPHMGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYS-KS-------ENA----------------------LA   52 (394)
T ss_dssp             -----CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHH-CC-------SEE----------------------EE
T ss_pred             CCCCCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh-CC-------CcE----------------------EE
Confidence            355666777776665532    4888789  999999999987 42       223                      67


Q ss_pred             cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        254 GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      |.|||.|+.+++..+. +.| ||.|++++|+|+.|...++..|++
T Consensus        53 ~~ggt~al~~~~~~l~-~~~-gd~Vl~~~~~~~~~~~~~~~~g~~   95 (394)
T 1o69_A           53 LNSATAALHLALRVAG-VKQ-DDIVLASSFTFIASVAPICYLKAK   95 (394)
T ss_dssp             ESCHHHHHHHHHHHTT-CCT-TCEEEEESSSCGGGTHHHHHTTCE
T ss_pred             eCCHHHHHHHHHHHcC-CCC-CCEEEECCCccHHHHHHHHHcCCE
Confidence            9999999999887541 457 899999999999999999888875

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=97.17  E-value=0.00077  Score=67.14  Aligned_cols=90  Identities=20%  Similarity=0.161  Sum_probs=64.0

Q ss_pred             CCchHHHHHHHHHHHccCCCCCCCCCCCC----HHHHHHHHHHHcCCCCccccCCceeeecccCCCCcccccccccccee
Q psy16707        177 PYVLPSVKQADEIVLNKNLDKEYAPIIGA----PDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIV  252 (420)
Q Consensus       177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~----~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v  252 (420)
                      ++.++.|.++......+.....|.+..|.    .++++.+++++ |.+       .+                      +
T Consensus        12 ~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~-g~~-------~~----------------------i   61 (418)
T 2c81_A           12 PQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN-GVP-------YC----------------------V   61 (418)
T ss_dssp             SCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH-TCS-------EE----------------------E
T ss_pred             CCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh-CCC-------cE----------------------E
Confidence            45567787777776654222348888895    55666666544 432       11                      5


Q ss_pred             ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+.+||.|+.+++..+. +.| ||.|++++|+|+.+...++..|++
T Consensus        62 ~~~~gt~al~~~~~~~~-~~~-gd~Vl~~~~~~~~~~~~~~~~g~~  105 (418)
T 2c81_A           62 PTTSGSTALMLALEALG-IGE-GDEVIVPSLTWIATATAVLNVNAL  105 (418)
T ss_dssp             EESCHHHHHHHHHHHTT-CCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             EeCCHHHHHHHHHHHcC-CCC-cCEEEECCCccHhHHHHHHHcCCE
Confidence            67889999999887541 457 899999999999999999888875

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=97.16  E-value=0.00063  Score=65.80  Aligned_cols=75  Identities=9%  Similarity=0.086  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHhc-CCCCCCccc-CCCCceEEe--cCCC----HHHHHHHHHhCCeEEeCCC----------cEEE
Q psy16707        339 DRIISMRQSLKDNLQKE-GSNKPWNHI-TDQIGMFCY--TGLN----ATQVEKLIKEHSVYLTKDG----------RISM  400 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~-g~~~~w~~i-~~q~GmF~~--~~l~----~~~v~~Ll~e~~Vy~~p~g----------Ris~  400 (420)
                      .++.++|+.+.+.|+++ |    +... .++.+.|.|  ++.+    .+++.+.+.++||.+.|+.          |+++
T Consensus       261 ~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i  336 (359)
T 3pj0_A          261 AEYFEAAKGLAERFNSCSG----VKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSV  336 (359)
T ss_dssp             HHHHHHHHHHHHHHHTSTT----EEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhhCCC----ceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEe
Confidence            45677888999999986 4    4442 344555554  4443    3455555578999999872          6665


Q ss_pred             cc-cCCCCHHHHHHHHHH
Q psy16707        401 AG-VTSKNVGYLAKAIHA  417 (420)
Q Consensus       401 ag-l~~~ni~~la~AI~~  417 (420)
                      .. ......+.+.+++++
T Consensus       337 ~~~~~~~~~e~l~~~l~~  354 (359)
T 3pj0_A          337 GDAFAEIPAKNLELVFRC  354 (359)
T ss_dssp             CTTGGGSCHHHHHHHHHH
T ss_pred             cCccccCCHHHHHHHHHH
Confidence            31 122345555555544

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=97.16  E-value=0.00092  Score=65.51  Aligned_cols=109  Identities=12%  Similarity=0.056  Sum_probs=80.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .+....+....++|..+..++...|.+.       +.++.++++++..|+.|.+.|++.     +.....+.|+|.+..+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~  333 (396)
T 3jtx_A          266 NFLLYRTYHGSAMSIPVQRASIAAWDDE-------QHVIDNRRLYQEKFERVIPILQQV-----FDVKLPDASFYIWLKV  333 (396)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHHHHTTT-----SCCCCCSSSSEEEEEC
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhc-----CCccCCCeeEEEEEEC
Confidence            4444444444567777788888888752       456778889999999999999764     3344567799988776


Q ss_pred             C----HHHHHHHHHhcceEEcC--------------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 N----ATQVEKLIKEHSVYLTK--------------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~----~~qv~~L~~~~~IY~~~--------------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .    .+-++.|.++++|++.+              .+  ||+++. +..+++..+++|.++
T Consensus       334 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~  394 (396)
T 3jtx_A          334 PDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAAEDIVSL  394 (396)
T ss_dssp             TTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence            5    45567787889999843              12  788887 888999999888765

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=97.09  E-value=0.0021  Score=63.23  Aligned_cols=113  Identities=18%  Similarity=0.211  Sum_probs=78.9

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++.+.....+++|..+..++...|.++++..+|   ++.++++++..|+.|.+.|++.+    |.....+.|+|.+..+
T Consensus       255 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  327 (385)
T 1b5p_A          255 AMASVSRQSTTSPDTIAQWATLEALTNQEASRAF---VEMAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMDT  327 (385)
T ss_dssp             HHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEEC
T ss_pred             HHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEec
Confidence            4444444555678888888888888764333344   77788999999999999998863    5556677888877544


Q ss_pred             -----CHHH-HHHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 -----NATQ-VEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 -----~~~q-v~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                           +.++ ++.|. +++|++.+.      |  |||++ .+..+++...+.|.++
T Consensus       328 ~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~-~~~~~i~~~l~~l~~~  381 (385)
T 1b5p_A          328 SPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFARV  381 (385)
T ss_dssp             TTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGGG
T ss_pred             CCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEec-CCHHHHHHHHHHHHHH
Confidence                 4554 46676 889998642      2  89987 6777777777766554

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=97.09  E-value=0.00028  Score=70.05  Aligned_cols=97  Identities=21%  Similarity=0.124  Sum_probs=73.2

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCC
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTG  239 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~  239 (420)
                      .+.||++.|.       ++..+.|.+|.......   ..|.+..|..+|++++++++ |.+       .+          
T Consensus        30 ~~~id~~~~~-------~~~~~~v~~a~~~~~~~---~~y~~~~~~~~l~~~la~~~-~~~-------~~----------   81 (399)
T 2oga_A           30 VPFLDLKAAY-------EELRAETDAAIARVLDS---GRYLLGPELEGFEAEFAAYC-ETD-------HA----------   81 (399)
T ss_dssp             BCSCCHHHHH-------HHTHHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHT-TSS-------EE----------
T ss_pred             CcccccCcCC-------CCCCHHHHHHHHHHHhc---CCCCCchhHHHHHHHHHHHH-CCC-------eE----------
Confidence            4678999996       12237777777766543   36777788999999999976 432       12          


Q ss_pred             ccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        240 SLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       240 ~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                  +.+.|||.|+.+++..+. +.| ||.|++++|+|+.+...++..|++
T Consensus        82 ------------v~~~~Gt~a~~~~l~~~~-~~~-gd~vl~~~~~~~~~~~~~~~~g~~  126 (399)
T 2oga_A           82 ------------VGVNSGMDALQLALRGLG-IGP-GDEVIVPSHTYIASWLAVSATGAT  126 (399)
T ss_dssp             ------------EEESCHHHHHHHHHHHTT-CCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             ------------EEecCHHHHHHHHHHHhC-CCC-cCEEEECCCccHHHHHHHHHCCCE
Confidence                        567889999999886541 457 899999999999999998888764

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=97.07  E-value=0.016  Score=58.52  Aligned_cols=122  Identities=8%  Similarity=-0.058  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCc
Q psy16707        146 SSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCP  222 (420)
Q Consensus       146 ~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~  222 (420)
                      .++.........+....+|++.+.     + .+..+.|.++.....+. ....|....|..++.+++.+++   +|.+. 
T Consensus        27 ~v~~~~~~~~~~~~~~~~~~~~f~-----~-~~~~~~v~e~~~~a~~~-~~~~~~~~~~~~~l~~~~~~~la~l~g~~~-   98 (452)
T 2dgk_A           27 VAFQIINDELYLDGNARQNLATFC-----Q-TWDDENVHKLMDLSINK-NWIDKEEYPQSAAIDLRCVNMVADLWHAPA-   98 (452)
T ss_dssp             HHHHHHHHHGGGSCCCTTBCSCCS-----C-CCCCHHHHHHHHHTTTC-BTTCTTTCHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred             HHHHHHHHHhcCCCCCccCCCCee-----C-CCchHHHHHHHHHHhcc-CCCChhhChhHHHHHHHHHHHHHHHhCCCc-
Confidence            455444444323333345665543     2 34557788777765543 2344666668788888877665   45431 


Q ss_pred             cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHh-c-----CCCC-----CEEEEcCCCCCCcHHH
Q psy16707        223 QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-F-----FPGE-----KVIYVPTPTWGNHIPI  291 (420)
Q Consensus       223 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-~-----~p~g-----d~VlvpdP~w~ny~~i  291 (420)
                          +.. .                +.+++.|.|||.|+.+++..+.. +     .| |     +.|++|+ +++.|...
T Consensus        99 ----~~~-~----------------~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~-G~~~~~~~vi~~~-~h~~~~~~  155 (452)
T 2dgk_A           99 ----PKN-G----------------QAVGTNTIGSSEACMLGGMAMKWRWRKRMEAA-GKPTDKPNLVCGP-VQICWHKF  155 (452)
T ss_dssp             ----CTT-S----------------CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHT-TCCCSCCEEEESS-CCHHHHHH
T ss_pred             ----ccc-c----------------CCceEEeCCHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcEEEECC-CcHHHHHH
Confidence                110 0                00126799999999887654422 0     13 3     5999999 99999988


Q ss_pred             HhhcCcc
Q psy16707        292 CKHTGLE  298 (420)
Q Consensus       292 ~~~aG~~  298 (420)
                      ++..|++
T Consensus       156 ~~~~G~~  162 (452)
T 2dgk_A          156 ARYWDVE  162 (452)
T ss_dssp             HHHTTCE
T ss_pred             HHHcCce
Confidence            8887765

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=97.05  E-value=0.0021  Score=64.12  Aligned_cols=104  Identities=16%  Similarity=0.324  Sum_probs=78.6

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH---------
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA---------   87 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~---------   87 (420)
                      +++..+..++...|.+.++.++|   ++.++++++..|+.|.+.|++.+    |..+..+.|+|.+.-+..         
T Consensus       299 ~~~~~~~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~  371 (428)
T 1iay_A          299 LVSTQTQYFLAAMLSDEKFVDNF---LRESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRESTFDS  371 (428)
T ss_dssp             CCCHHHHHHHHHHTTCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSSSHHH
T ss_pred             cCCHHHHHHHHHHhcChHHHHHH---HHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEechhhcCCCchhH
Confidence            45556777888999987643444   55678899999999999998863    444455689998776642         


Q ss_pred             --HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 --TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 --~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                        +-.++|.++++|++.+.        +  ||+++..+..+++.++++|.++
T Consensus       372 ~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~  423 (428)
T 1iay_A          372 EMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF  423 (428)
T ss_dssp             HHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence              34577888889998642        3  8999878899999999998876

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=97.03  E-value=0.038  Score=56.65  Aligned_cols=84  Identities=10%  Similarity=0.237  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC-CCceEEe--cCC---CHHHHHHHHHhCCeEEeC---CC----c
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD-QIGMFCY--TGL---NATQVEKLIKEHSVYLTK---DG----R  397 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~-q~GmF~~--~~l---~~~~v~~Ll~e~~Vy~~p---~g----R  397 (420)
                      +-++.+.++..++++.+.+.|++. |    ++.+.+ +.+++++  .+.   +.+..++|.++..+++.|   .|    |
T Consensus       376 ~g~~~~~~~~~~~a~~l~~~L~~~~g----~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR  451 (481)
T 4e1o_A          376 KNLQAHVRHGTEMAKYFESLVRNDPS----FEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIR  451 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCTT----EECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----eEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEE
Confidence            446677788899999999999986 4    554433 3444444  232   235567887776677765   23    8


Q ss_pred             EEEccc--CCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGV--TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl--~~~ni~~la~AI~~vv  419 (420)
                      |++++-  +.++|+++.++|.++.
T Consensus       452 ~~~~~~~tt~~di~~~~~~i~~~~  475 (481)
T 4e1o_A          452 FTVTSQFTTRDDILRDWNLIRDAA  475 (481)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHH
Confidence            887754  4578999999988763

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=97.00  E-value=0.001  Score=64.46  Aligned_cols=89  Identities=16%  Similarity=0.042  Sum_probs=67.9

Q ss_pred             CCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecc
Q psy16707        176 KPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGI  255 (420)
Q Consensus       176 ~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~  255 (420)
                      .+++++.|.+|......+   ..|.|..+..+|++++++++ |.+       .+                      +.|.
T Consensus         8 ~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~v----------------------~~~~   54 (375)
T 2fnu_A            8 EPCLDKEDKKAVLEVLNS---KQLTQGKRSLLFEEALCEFL-GVK-------HA----------------------LVFN   54 (375)
T ss_dssp             CCCCCHHHHHHHHHHHTS---SCCSSSHHHHHHHHHHHHHH-TCS-------EE----------------------EEES
T ss_pred             CCCCCHHHHHHHHHHHHc---CcccCChHHHHHHHHHHHHh-CCC-------eE----------------------EEeC
Confidence            467888888888776642   23556667889999999976 422       23                      6799


Q ss_pred             cchHHHHHHHHHHHh-cCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        256 SGTGSLRVGAAFLKN-FFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       256 gGtgal~~~~~~l~~-~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      |||.|+.+++..+.. +.| ||.|++++|+|+.+...++..|++
T Consensus        55 ggt~al~~~~~~~~~~~~~-gd~Vl~~~~~~~~~~~~~~~~g~~   97 (375)
T 2fnu_A           55 SATSALLTLYRNFSEFSAD-RNEIITTPISFVATANMLLESGYT   97 (375)
T ss_dssp             CHHHHHHHHHHHSSCCCTT-SCEEEECSSSCTHHHHHHHHTTCE
T ss_pred             CHHHHHHHHHHHhcccCCC-CCEEEECCCccHhHHHHHHHCCCE
Confidence            999999998875411 447 899999999999999998888875

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=97.00  E-value=0.0024  Score=62.81  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=77.3

Q ss_pred             CccchHHHHHHHHhCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QV   90 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~-~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv   90 (420)
                      +++.....++...|.+.    .|. +.++.++++++..|+.|.+.|++... + |..+..+.|+|.+..+    +.+ -+
T Consensus       278 ~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~  351 (407)
T 2zc0_A          278 CAPAISQYIALEYLKRG----YFEKYHLEGALLGYKEKRDIMLKALENHLP-N-AEFTKPIAGMFVMFFLPEGADGISFA  351 (407)
T ss_dssp             SSCHHHHHHHHHHHHTT----HHHHHTTTTHHHHHHHHHHHHHHHHHHHCT-T-SCBCCCSBSSEEEEECSTTCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHcC----CchHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-CEEecCCCcEEEEEEcCCCCCHHHHH
Confidence            34556677777778764    355 56788899999999999999987532 2 5555567888877655    344 45


Q ss_pred             HHHHHhcceEEcCC----------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         91 EKLIKEHSVYLTKD----------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        91 ~~L~~~~~IY~~~~----------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.|.++|+|++.+.          +  ||+++..+..+++.++++|.++
T Consensus       352 ~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~  400 (407)
T 2zc0_A          352 NELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKL  400 (407)
T ss_dssp             HHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred             HHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence            67888889998642          2  8899877889999999988775

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=96.99  E-value=0.00078  Score=67.08  Aligned_cols=90  Identities=11%  Similarity=-0.019  Sum_probs=64.3

Q ss_pred             CCCCchHHHHHHHHHHHccCCCCCCCC-CCCCHHHHHHH-HHHHcCCCCccccCCceeeecccCCCCcccccccccccee
Q psy16707        175 GKPYVLPSVKQADEIVLNKNLDKEYAP-IIGAPDFGKLA-AQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIV  252 (420)
Q Consensus       175 g~~~~~~~V~~a~~~~~~~~~~~~Y~p-~~G~~~fr~a~-~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v  252 (420)
                      +++++++.|.+|...+..+ .  .|.+ .....+|++++ ++++ |..      ..+                      +
T Consensus        10 p~~~~~~~i~~a~~~~~~~-~--~~~~~~~~~~~l~~~~~a~~~-g~~------~~~----------------------v   57 (377)
T 3ju7_A           10 ASTVPVIEYLDELKEIDAS-H--IYTNYGPINQRFEQTIMSGFF-QNR------GAV----------------------T   57 (377)
T ss_dssp             CCCCCGGGGHHHHHHHHHH-T--CCSSSCHHHHHHHHHHHHHTS-TTC------SEE----------------------E
T ss_pred             CCCCCcHHHHHHHHHHHHc-C--CcccCCHHHHHHHHHHHHHHh-CCC------CeE----------------------E
Confidence            3446677777776666543 2  2333 23478999999 8754 411      112                      6


Q ss_pred             ecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       253 qt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+.|||.|+.+++..+ .+.| ||+|++|+|+|+.|...++.+|++
T Consensus        58 ~~~sgt~al~~al~~l-~~~~-Gd~Vi~~~~~~~~~~~~~~~~G~~  101 (377)
T 3ju7_A           58 TVANATLGLMAAIQLK-KRKK-GKYALMPSFTFPATPLAAIWCGLE  101 (377)
T ss_dssp             EESCHHHHHHHHHHHH-SCTT-CCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             EeCCHHHHHHHHHHHc-CCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence            7999999999887644 2457 999999999999999999988886

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=96.98  E-value=0.029  Score=57.97  Aligned_cols=84  Identities=11%  Similarity=0.172  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEec--C---CCHHHH-HHHHHhCCeEE----eCC----
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--G---LNATQV-EKLIKEHSVYL----TKD----  395 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~~--~---l~~~~v-~~Ll~e~~Vy~----~p~----  395 (420)
                      +.++.+.++..+.++.|.+.|++.|.   ++.+.+  +.+++++.  +   ++...+ ++| .+.||++    .|.    
T Consensus       338 ~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~p~~~~~  413 (502)
T 3hbx_A          338 EGYRNVMENCRENMIVLREGLEKTER---FNIVSKDEGVPLVAFSLKDSSCHTEFEISDML-RRYGWIVPAYTMPPNAQH  413 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTC---EEECSCSSSSSEEEEEESSCSSCCHHHHHHHH-HTTTCBCCEEECCTTCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCC---EEEEeCCCCceEEEEEecCCCcCCHHHHHHHH-HhCCcEEeeccCCcccCC
Confidence            34556667777888899999998752   554444  45566542  2   455444 555 6889875    232    


Q ss_pred             ---CcEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        396 ---GRISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ---gRis~agl-~~~ni~~la~AI~~vv  419 (420)
                         -||++..- +.+.++.+.++|.+++
T Consensus       414 ~~~lRisv~~~~t~edid~li~~L~~~l  441 (502)
T 3hbx_A          414 ITVLRVVIREDFSRTLAERLVIDIEKVM  441 (502)
T ss_dssp             CEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence               18887633 5678999999988765

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=96.92  E-value=0.0012  Score=65.72  Aligned_cols=113  Identities=12%  Similarity=0.125  Sum_probs=83.3

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc------cc-cccc
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI------TD-QIGM   79 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i------~~-Q~Gm   79 (420)
                      +....+....+++..+...+...|.+.   ..|...++.+++++...|+.|.+.|++.+    |..+      .. +.|+
T Consensus       300 ~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~  372 (437)
T 3g0t_A          300 SSSALYALSSGATHSAQWGMAAMLKAC---NDGEYNFRDSVIEYGRKARIMKKMFLDNG----FNIVYDKDGNEPLADGF  372 (437)
T ss_dssp             HTTHHHHHHSSSCHHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHHHHHHHHTTT----EEESSCEETTEECCSSS
T ss_pred             HHHHHhhhcCCCCHHHHHHHHHHHhCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHcC----CEEeccccCCCCCceeE
Confidence            334444455677778888888888642   33555588899999999999999998872    5555      35 7888


Q ss_pred             eeecC---CCHHHH-HHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707         80 FCYTG---LNATQV-EKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        80 Fs~~g---L~~~qv-~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      |.+..   .+.+++ +.|. +++|++.+..          ||+++.++..+|+.++++|.++
T Consensus       373 ~~~~~~~~~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~  433 (437)
T 3g0t_A          373 YFTVGYKGMDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQML  433 (437)
T ss_dssp             EEEEEETTCCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHH
T ss_pred             EEEEecCCCCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence            88764   455554 5565 5699886432          9999988999999999999875

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=96.88  E-value=0.0024  Score=62.01  Aligned_cols=107  Identities=6%  Similarity=-0.013  Sum_probs=78.5

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      ..+....+....++|..+...+...|.+.       +.++.++++++..|+.|.+.|+      .|.  ..+.|+|.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~------~~~--~~~~~~~~~~~  315 (376)
T 3ezs_A          251 EKYKAFRAYLGYTSANAIQKASEAAWLDD-------RHAEFFRNIYANNLKLARKIFK------NTL--IYPYSFYVYLP  315 (376)
T ss_dssp             HHHHHHHTTTCCCCCHHHHHHHHHHHHCS-------HHHHHHHHHHHHHHHHHHHHST------TCC--CCSBSSEEEEE
T ss_pred             HHHHHHHhhhcCCCChHHHHHHHHHHhCc-------HHHHHHHHHHHHHHHHHHHHhc------CCC--CCCcceEEEEE
Confidence            34444444444566677777777777763       2368888999999999999886      244  56889999887


Q ss_pred             CC--HHHHHHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LN--ATQVEKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~--~~qv~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.  .+-++.|.++++|++.+          .+  ||++++ +.++++.++++|.++
T Consensus       316 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~  371 (376)
T 3ezs_A          316 VQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETY  371 (376)
T ss_dssp             CSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence            74  45567788779999853          12  788886 999999999998876

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=96.82  E-value=0.004  Score=62.19  Aligned_cols=118  Identities=13%  Similarity=0.135  Sum_probs=80.0

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG-MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~-m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ..+....+....+++..+..++...|.+.++    .+.+.. +++++...|..+.+.|++.-....|.....+.|+|.+.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~  370 (444)
T 3if2_A          295 EAVSAMNAVVNLAPTRFGAAIATPLVANDRI----KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWL  370 (444)
T ss_dssp             HHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH----HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEE
T ss_pred             HHHHHHHHhccCCCChHHHHHHHHHHHcCch----hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEE
Confidence            3444444544456677788888888887654    334443 66667777777777776532222466666788999876


Q ss_pred             -----CCCHHHHHHHHHhcceEEcCC-----C-------------ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 -----GLNATQVEKLIKEHSVYLTKD-----G-------------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 -----gL~~~qv~~L~~~~~IY~~~~-----G-------------Rinvagl~~~ni~~va~ai~~v  127 (420)
                           +++.+++...-.+++|++.+.     |             ||+++. +..+|+..+++|.++
T Consensus       371 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~  436 (444)
T 3if2_A          371 WFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEV  436 (444)
T ss_dssp             EETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHH
T ss_pred             EcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence                 567777665447889998631     1             889988 889999998888765

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=96.77  E-value=0.00072  Score=66.09  Aligned_cols=95  Identities=12%  Similarity=-0.015  Sum_probs=71.3

Q ss_pred             ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      .+|++.+.       ++..+.+.++.......   ..|.+..+..+|++++++++ |.+       .+            
T Consensus         5 ~~~l~~~~-------~~~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~------------   54 (373)
T 3frk_A            5 FASFKPMH-------DEIEYEIKFKFEEIYKR---NWFILGDEDKKFEQEFADYC-NVN-------YC------------   54 (373)
T ss_dssp             SCCCHHHH-------HHHHHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHH-TSS-------EE------------
T ss_pred             ccCCCccc-------CCCCHHHHHHHHHHHHC---CCccCCchHHHHHHHHHHHh-CCC-------eE------------
Confidence            45565552       45667777777666543   24777889999999999986 322       22            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                                +.+.|||.|+.+++..+ .+.| ||+|++++|+|+.+...++..|++
T Consensus        55 ----------i~~~sgt~al~~~l~~l-~~~~-gd~Vi~~~~~~~~~~~~~~~~g~~   99 (373)
T 3frk_A           55 ----------IGCGNGLDALHLILKGY-DIGF-GDEVIVPSNTFIATALAVSYTGAK   99 (373)
T ss_dssp             ----------EEESCHHHHHHHHHHHT-TCCT-TCEEEEETTSCTHHHHHHHHHSCE
T ss_pred             ----------EEeCCHHHHHHHHHHHc-CCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence                      66899999999988644 2457 999999999999999999888875

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=96.77  E-value=0.0068  Score=58.28  Aligned_cols=98  Identities=16%  Similarity=0.206  Sum_probs=73.0

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHHHHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQVEKL   93 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv~~L   93 (420)
                      .+++..+...+...|.+.       +.++.++++++..|+.|.+.|++.+    |..+ ...|+|.+..+  +.+++...
T Consensus       242 ~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~  309 (354)
T 3ly1_A          242 EKINFSGVDAALASMNDS-------AFITYSKKSNDVSRQILLKALEDLK----LPYL-PSEGNFVFHQLVVPLKDYQTH  309 (354)
T ss_dssp             SCCCHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHHHHHHHHT----CCBC-CCCSSEEEEECSSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHCC----CeEC-CCCceEEEEECCCCHHHHHHH
Confidence            467778888888889864       3467788899999999999998873    4333 56788888777  45665443


Q ss_pred             HHhcceEEc-----CCC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLT-----KDG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~-----~~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      -.+++|++.     ..+  ||+++  ++.+++.++++|.++
T Consensus       310 l~~~gi~v~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~  348 (354)
T 3ly1_A          310 MADAGVLIGRAFPPADNWCRISLG--TPQEMQWVADTMREF  348 (354)
T ss_dssp             HHHTTEECCCCCTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             HHHCCEEEeecCCCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence            356899987     112  77766  788999999999876

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=96.75  E-value=0.0096  Score=60.55  Aligned_cols=68  Identities=6%  Similarity=-0.182  Sum_probs=49.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCC
Q psy16707        197 KEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK  276 (420)
Q Consensus       197 ~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd  276 (420)
                      .-|.|.....++++.+++  +|.+      +.+                      +.|.|||.|+.+++..+  +.| ||
T Consensus        51 ~~~~~~~~~~~~~~~la~--~g~~------~~v----------------------~~~~G~t~a~~~~~~a~--~~~-gd   97 (446)
T 2x3l_A           51 DLHHPEEVILKSMKQVEK--HSDY------DGY----------------------FLVNGTTSGILSVIQSF--SQK-KG   97 (446)
T ss_dssp             CTTSCSSHHHHHHHHHCS--CTTE------EEE----------------------EESSHHHHHHHHHHHTT--TTS-SS
T ss_pred             cccCcchHHHHHHHHHHh--cCCC------ceE----------------------EEeCCHHHHHHHHHHHh--cCC-CC
Confidence            345566667788888887  5542      223                      56899999999988644  457 99


Q ss_pred             EEEEcCCCCCCcHHHHhhcCc
Q psy16707        277 VIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       277 ~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .|++++|+|+.+...+..+|+
T Consensus        98 ~Vlv~~~~h~s~~~~~~~~G~  118 (446)
T 2x3l_A           98 DILMARNVHKSVLHALDISQQ  118 (446)
T ss_dssp             CEEECTTCCHHHHHHHHHHTC
T ss_pred             EEEEecCccHHHHHHHHHcCC
Confidence            999999999988776655543

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=96.73  E-value=0.034  Score=56.06  Aligned_cols=44  Identities=14%  Similarity=0.262  Sum_probs=35.1

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhh----cCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKH----TGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~----aG~~  298 (420)
                      +.+.||+.|+.+++..+  +.| ||.|++++|+|+.+...++.    .|++
T Consensus       100 ~~~~sG~~Ai~~al~~l--~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~  147 (414)
T 3ndn_A          100 FATASGMAAVFTSLGAL--LGA-GDRLVAARSLFGSCFVVCSEILPRWGVQ  147 (414)
T ss_dssp             EEESSHHHHHHHHHHTT--CCT-TCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred             EEECCHHHHHHHHHHHH--hCC-CCEEEEcCCccchHHHHHHHHHHHcCcE
Confidence            56899999998877533  557 99999999999998877754    6664

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=96.73  E-value=0.0059  Score=58.20  Aligned_cols=100  Identities=12%  Similarity=0.245  Sum_probs=72.1

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLI   94 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~   94 (420)
                      +.+++..+...+...|.+.+.   |.    ...+++...|+.|.+.|++.+    |.....+.+++++...+.+++..+-
T Consensus       226 ~~~~~~~~~~a~~~~l~~~~~---~~----~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~l  294 (337)
T 3p1t_A          226 FCNVGTLDLHALEAALDNDRA---RE----AHIAKTLAQRRRVADALRGLG----YRVASSEANFVLVENAAGERTLRFL  294 (337)
T ss_dssp             TTCSCHHHHHHHHHHHTCHHH---HH----HHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSEEEEECTTTHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCHHH---HH----HHHHHHHHHHHHHHHHHHHCc----CEECCCCCeEEEEEcCCHHHHHHHH
Confidence            345666777788888887432   22    334455667888888888763    5556667777777777777777666


Q ss_pred             HhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         95 KEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        95 ~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++++|++.+.+        ||+++  ++.++++++++|.++
T Consensus       295 ~~~gi~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~  333 (337)
T 3p1t_A          295 RERGIQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEY  333 (337)
T ss_dssp             HHTTEECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             HHCCeEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHH
Confidence            78899987543        77876  678999999999886

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=96.71  E-value=0.0073  Score=59.35  Aligned_cols=103  Identities=17%  Similarity=0.247  Sum_probs=75.0

Q ss_pred             ccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HHHH
Q psy16707         18 PPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QVEK   92 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv~~   92 (420)
                      +|..+...+...|.+.    .| +.++.++++++..|+.|.+.|++.- |+.|..+..+.|+|.+.-+    +.+ -+++
T Consensus       270 ~~~~~~~a~~~~l~~~----~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~  343 (397)
T 2zyj_A          270 TPMLNQMLVHELLKEG----FS-ERLERVRRVYREKAQAMLHALDREV-PKEVRYTRPKGGMFVWMELPKGLSAEGLFRR  343 (397)
T ss_dssp             CCHHHHHHHHHHHTTT----HH-HHHHHHHHHHHHHHHHHHHHHHHHS-CTTSEECCCSBSSEEEEECSTTCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhC----CH-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEccCCccEEEEEEcCCCCCHHHHHHH
Confidence            4556677788888864    45 6788889999999999999998742 2225555567789887644    344 4566


Q ss_pred             HHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         93 LIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        93 L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      |.++ +|++.+          .+  ||+++..+..+++.++++|.++
T Consensus       344 l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~  389 (397)
T 2zyj_A          344 ALEE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRA  389 (397)
T ss_dssp             HHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred             HHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            7655 999863          23  8999888888999999888765

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=96.69  E-value=0.0019  Score=62.76  Aligned_cols=107  Identities=9%  Similarity=0.058  Sum_probs=77.7

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCC
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLN   86 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~   86 (420)
                      +....+++..+...+...|.+.      .+.++.++++++..|+.|.+.|++.-.  .|..+..+.|+|.+.     +.+
T Consensus       251 ~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  322 (377)
T 3fdb_A          251 PVIKDGASTLGLIAAEAAYRYG------TDFLNQEVAYLKNNHDFLLHEIPKRIP--GAKITPMQATYLMWIDFRDTTIE  322 (377)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHC------HHHHHHHHHHHHHHHHHHHHHHHHHST--TCEECCCSBCSEEEEECTTSCCC
T ss_pred             HhhcCCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHhhCC--CceEecCCeeEEEEEECcccCCC
Confidence            3334566667777766666532      244677889999999999999987421  367777888988655     345


Q ss_pred             HHHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         87 ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 ~~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .+.++.|.++++|++.+.        +  ||+++. +..+++..+++|.++
T Consensus       323 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~  372 (377)
T 3fdb_A          323 GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKA  372 (377)
T ss_dssp             SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHH
Confidence            567888989999998642        2  788885 788888888888775

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=96.69  E-value=0.0092  Score=58.27  Aligned_cols=113  Identities=16%  Similarity=0.195  Sum_probs=79.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++........++|..+...+...|.+.   ..| +.++.++++++..|+.|.+.|++.+    |..+..+.|+|.+.-+
T Consensus       254 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  325 (389)
T 1gd9_A          254 RMVKFQMYNATCPVTFIQYAAAKALKDE---RSW-KAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRI  325 (389)
T ss_dssp             HHHHHHTTTTCSCCHHHHHHHHHHHTCH---HHH-HHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCBC
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHhCC---Ccc-hHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEec
Confidence            3444444444566777777778888763   222 3577888999999999999998863    5555667788876544


Q ss_pred             -----CHHH-HHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 -----NATQ-VEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 -----~~~q-v~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                           +.++ ++.|.++++|++.+.        +  ||+++. +..+++...++|.++
T Consensus       326 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~  382 (389)
T 1gd9_A          326 RDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERV  382 (389)
T ss_dssp             GGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence                 4544 466777899998642        2  889886 778888888877765

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=96.64  E-value=0.0068  Score=58.65  Aligned_cols=97  Identities=13%  Similarity=0.096  Sum_probs=72.9

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~~L   93 (420)
                      +++..+...+...|.+.       +.++.++++++..|+.|.+.|++.+    +. +....|+|.+..+   +.+++...
T Consensus       257 ~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~l~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~  324 (365)
T 3get_A          257 NVSNLALKAAVAAMDDD-------EFTEKTLENNFSQMELYKEFAKKHN----IK-IIDSYTNFITYFFDEKNSTDLSEK  324 (365)
T ss_dssp             CSCHHHHHHHHHHHTCH-------HHHHHHHHHHHHHHHHHHHHHHHTT----CE-ECCCSSSEEEEECSSSCHHHHHHH
T ss_pred             CcCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHhCC----CE-ECCCCCeEEEEECCCCCHHHHHHH
Confidence            47778888888888863       4467788899999999999998873    33 2456678877666   45555443


Q ss_pred             HHhcceEEcCCC-------ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTKDG-------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~~G-------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      -.+++|++.+.+       ||+++  ++.++++++++|.++
T Consensus       325 l~~~gi~v~~g~~~~~~~iRis~~--~~~~i~~l~~~l~~~  363 (365)
T 3get_A          325 LLKKGIIIRNLKSYGLNAIRITIG--TSYENEKFFTEFDKI  363 (365)
T ss_dssp             HHTTTEECEECGGGTCSEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             HHHCCEEEEECccCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence            345799987654       88887  789999999999875

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=96.64  E-value=0.0043  Score=61.28  Aligned_cols=104  Identities=16%  Similarity=0.166  Sum_probs=69.7

Q ss_pred             ccCCCchHHHHHHHHHhCChhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC--C--CCceEEecC--
Q psy16707        305 FYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT--D--QIGMFCYTG--  375 (420)
Q Consensus       305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~~e--l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~--~--q~GmF~~~~--  375 (420)
                      .+++++..++..+...|     + ...++  ++.++++++++|+.+.+.|+++ |    +....  +  +.++|.|+.  
T Consensus       271 ~~~t~~~~~~~a~~~al-----~-~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~  340 (398)
T 2fyf_A          271 TYNTPAIATLALLAEQI-----D-WLVGNGGLDWAVKRTADSSQRLYSWAQERPY----TTPFVTDPGLRSQVVGTIDFV  340 (398)
T ss_dssp             CSSCCCHHHHHHHHHHH-----H-HHHHHTSHHHHHHHHHHHHHHHHHHHHHSTT----EEESCCSGGGBCSSEEEEEEC
T ss_pred             CCCCCCHHHHHHHHHHH-----H-HHHHccCHHHHHHHHHHHHHHHHHHHHHcCC----ceeccCChhhcCCcEEEEECC
Confidence            34566666655444433     1 22233  7788899999999999999987 4    44442  2  356566643  


Q ss_pred             --CCHH-HHHHHHHhCCeEEeCC------C--cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        376 --LNAT-QVEKLIKEHSVYLTKD------G--RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       376 --l~~~-~v~~Ll~e~~Vy~~p~------g--Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                        .+.+ .++.|. +.||.+.++      +  |||+.. .+.++++++.++|.+++
T Consensus       341 ~~~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l  395 (398)
T 2fyf_A          341 DDVDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVV  395 (398)
T ss_dssp             TTSCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence              3444 456665 559999763      2  999874 47889999999998875

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=96.62  E-value=0.038  Score=57.22  Aligned_cols=93  Identities=11%  Similarity=-0.051  Sum_probs=65.4

Q ss_pred             CchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH---cCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707        178 YVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA---YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG  254 (420)
Q Consensus       178 ~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt  254 (420)
                      ..+..+.++.....+ .....|....|..++.+++++|+   +|.+.   .+..+                      +.|
T Consensus       107 ~~~~~~~e~l~~~~~-~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~---~~~~~----------------------~~t  160 (511)
T 3vp6_A          107 DIIGLAGEWLTSTAN-TNMFTYEIAPVFVLMEQITLKKMREIVGWSS---KDGDG----------------------IFS  160 (511)
T ss_dssp             CHHHHHHHHHHHHHC-CCSSCTTTCHHHHHHHHHHHHHHHHHHTCCS---SSCEE----------------------EEE
T ss_pred             cHHHHHHHHHHHHhc-cCCCCcccCchHHHHHHHHHHHHHHHhCCCC---CCCce----------------------EEC
Confidence            344455566665554 35678888889999999998887   55431   11222                      679


Q ss_pred             ccchHHHHHHHHHHHhc------------CCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        255 ISGTGSLRVGAAFLKNF------------FPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       255 ~gGtgal~~~~~~l~~~------------~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .|||.|...++..+...            .| ++.|++++++++++...++.+|+
T Consensus       161 ~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~-~~~v~~s~~~H~s~~~~~~~~g~  214 (511)
T 3vp6_A          161 PGGAISNMYSIMAARYKYFPEVKTKGMAAVP-KLVLFTSEQSHYSIKKAGAALGF  214 (511)
T ss_dssp             SSHHHHHHHHHHHHHHHHCTHHHHHCGGGSC-CEEEEEETTSCTHHHHHHHHTTS
T ss_pred             CchHHHHHHHHHHHHHHhhhhhhhcCcccCC-CeEEEECCCchHHHHHHHHHcCC
Confidence            99999987766544321            14 67999999999999999888887

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=96.55  E-value=0.0031  Score=62.00  Aligned_cols=90  Identities=19%  Similarity=0.101  Sum_probs=67.5

Q ss_pred             CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707        175 GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG  254 (420)
Q Consensus       175 g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt  254 (420)
                      +.+...+.|.+|......+   ..|.+..+..+|++++++++ |..       .+                      +.+
T Consensus         9 ~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-~~~-------~~----------------------i~~   55 (390)
T 3b8x_A            9 ASSTWDDLEYKAIQSVLDS---KMFTMGEYVKQYETQFAKTF-GSK-------YA----------------------VMV   55 (390)
T ss_dssp             CCCCCCHHHHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHH-TCS-------EE----------------------EEE
T ss_pred             CCCCCCHHHHHHHHHHHHc---CCCCCChHHHHHHHHHHHHH-CCC-------cE----------------------EEE
Confidence            3466777777777666543   24667788999999999987 322       11                      568


Q ss_pred             ccchHHHHHHHHHHH-----hcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        255 ISGTGSLRVGAAFLK-----NFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       255 ~gGtgal~~~~~~l~-----~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+||.|+.+++..+.     .+.| ||.|++++|+|+.+...++..|++
T Consensus        56 ~sGt~a~~~al~~~~~~~~~~~~~-g~~Vi~~~~~~~~~~~~~~~~g~~  103 (390)
T 3b8x_A           56 SSGSTANLLMIAALFFTKKPRLKK-GDEIIVPAVSWSTTYYPLQQYGLR  103 (390)
T ss_dssp             SCHHHHHHHHHHHTTSSSSCSCCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred             CCHHHHHHHHHHHHHhhhhcCCCC-cCEEEECCCCcHHHHHHHHHcCCE
Confidence            899999988876441     1456 899999999999999988888875

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=96.55  E-value=0.001  Score=67.12  Aligned_cols=121  Identities=10%  Similarity=0.050  Sum_probs=75.5

Q ss_pred             ccccCCChHHHHHHHH--HccCCCCceeeccc-ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAF--KKDTNVNKINLGVG-AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQL  215 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~--~~d~~~~kInL~iG-~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~  215 (420)
                      +..+.+.+++...+..  .+..+.+.++++.| .|.|-....++ +.|.+|....... ....|.+..|..+|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~-~~~~y~~~~~~~~l~~~la~~   86 (467)
T 2oqx_A            9 IRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMR-GDEAYSGSRSYYALAESVKNI   86 (467)
T ss_dssp             CCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTS-CCCCSSSCHHHHHHHHHHHHH
T ss_pred             eeeecccccccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhcc-CcceeccCchhHHHHHHHHHH
Confidence            4455555543333222  22345678999998 46665555555 6666666655432 345798888999999999998


Q ss_pred             HcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCC----C----CEEEEcCCCCCC
Q psy16707        216 AYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPG----E----KVIYVPTPTWGN  287 (420)
Q Consensus       216 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~----g----d~VlvpdP~w~n  287 (420)
                      + |.+       .+                      +.|.|||.|+.+++..+..  |.    |    |.|+++.+.|++
T Consensus        87 ~-~~~-------~v----------------------~~t~~gt~A~~~al~~~~~--~~~~~~G~~~~d~Ii~~~~h~~t  134 (467)
T 2oqx_A           87 F-GYQ-------YT----------------------IPTHQGRGAEQIYIPVLIK--KREQEKGLDRSKMVAFSNYFFDT  134 (467)
T ss_dssp             H-CCS-------EE----------------------EEEC--CCSHHHHHHHHHH--HHHHHHCCCTTTCEEEESSCCHH
T ss_pred             h-CcC-------cE----------------------EEcCCcHHHHHHHHHHHhc--cccccCCCCccceEEeccccccc
Confidence            7 432       23                      5699999999888876543  21    4    778887666555


Q ss_pred             cHHHHh
Q psy16707        288 HIPICK  293 (420)
Q Consensus       288 y~~i~~  293 (420)
                      |.....
T Consensus       135 ~~~~~~  140 (467)
T 2oqx_A          135 TQGHSQ  140 (467)
T ss_dssp             HHHHHH
T ss_pred             chhhhh
Confidence            544443

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=96.55  E-value=0.0095  Score=59.07  Aligned_cols=111  Identities=14%  Similarity=0.129  Sum_probs=76.4

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .+....+....+++..+...+...|.+.   ..|   ++.++++++..|+.|.+.|++.+    |..+..+.|||.+.-+
T Consensus       274 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~  343 (404)
T 2o1b_A          274 ALKKYQTHTNAGMFGALQDAAIYALNHY---DDF---LEEQSNVFKTRRDRFEAMLAKAD----LPFVHAKGGIYVWLET  343 (404)
T ss_dssp             HHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHTT----CCEECCCBSSEEEEEC
T ss_pred             HHHHHHhhccCCCCHHHHHHHHHHHhcC---HHH---HHHHHHHHHHHHHHHHHHHHhcC----CeecCCCcceEEEEeC
Confidence            3444444433456666666666666542   334   66778899999999999998862    5555667898776543


Q ss_pred             ----CHHH-HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 ----NATQ-VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ----~~~q-v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                          +.++ +++|.++++|++.+        .+  ||+++. +..+++...++|.++
T Consensus       344 ~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~  399 (404)
T 2o1b_A          344 PPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTEL  399 (404)
T ss_dssp             CTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGG
T ss_pred             CCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHH
Confidence                4455 56677788999864        23  889887 788888888888765

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=96.51  E-value=0.0096  Score=60.39  Aligned_cols=106  Identities=13%  Similarity=0.165  Sum_probs=77.4

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QV   90 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv   90 (420)
                      .+++..+..++...|.+.    .|.+.++.++++++..|..|.+.|++.-. +.+..+..+.|||.+.-+    +.+ -+
T Consensus       319 ~~~~~~~q~a~~~~L~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~g~~~~~p~~g~~~~v~~~~~~~~~~l~  393 (448)
T 3aow_A          319 LCTNVFGQVVAWRYVDGG----YLEKHIPEIRKFYKPRRDAMLEALEEFMP-EGVKWTKPEGGMFIWVTLPDGIDSKKML  393 (448)
T ss_dssp             SSCCHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence            345667777888888764    46777888999999999999999987522 125555567799988755    344 45


Q ss_pred             HHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         91 EKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        91 ~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++|.++ +|++.+          .+  ||+++..+..+|+..+++|.++
T Consensus       394 ~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~  441 (448)
T 3aow_A          394 ERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAET  441 (448)
T ss_dssp             HHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHH
T ss_pred             HHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            667666 898753          23  8898887888999988888765

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=96.51  E-value=0.022  Score=55.46  Aligned_cols=104  Identities=14%  Similarity=0.173  Sum_probs=70.1

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceeec---CC
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCYT---GL   85 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~G-mFs~~---gL   85 (420)
                      .+++||..+...+...|.      .+.+ .++.+++|++.+|+.|.+.|++.+    +..+..   +.+ ++++.   |+
T Consensus       257 ~~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~  326 (393)
T 2huf_A          257 YHHTISSTLLYGLREAIA------MACEEGLPALIARHEDCAKRLYRGLQDAG----FELYADPKDRLSTVTTIKVPQGV  326 (393)
T ss_dssp             CSCCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCTTEEEEECCTTC
T ss_pred             CCCCCCHHHHHHHHHHHH------HHHHhCHHHHHHHHHHHHHHHHHHHHHcC----CeeccCccccCCcEEEEEcCCCC
Confidence            345677776665554552      1222 388899999999999999998863    333322   234 55442   56


Q ss_pred             CHHHH-HHHHHhcceEEcCC--------CceecccC--CcCCHHHHHHHHHhh
Q psy16707         86 NATQV-EKLIKEHSVYLTKD--------GRISMAGV--TSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~qv-~~L~~~~~IY~~~~--------GRinvagl--~~~ni~~va~ai~~v  127 (420)
                      +.+++ +.|.++++|++...        -||++.+.  +..++++++++|.++
T Consensus       327 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~  379 (393)
T 2huf_A          327 DWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEA  379 (393)
T ss_dssp             CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHH
Confidence            77666 46777889998642        27888674  466799999999876

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=96.48  E-value=0.0062  Score=59.91  Aligned_cols=108  Identities=16%  Similarity=0.159  Sum_probs=75.8

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++...+....++|..+...+...|.+.         ++.+++++...|+.|.+.|++.+    |..+..+.|+|.+.-+
T Consensus       267 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  333 (389)
T 1o4s_A          267 AVSKIQSHTTSCINTVAQYAALKALEVD---------NSYMVQTFKERKNFVVERLKKMG----VKFVEPEGAFYLFFKV  333 (389)
T ss_dssp             HHHHHHHHHTCSCCHHHHHHHHHHTTCC---------CHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSBSSEEEEEC
T ss_pred             HHHHHhhhcccCCCHHHHHHHHHHHhcc---------HHHHHHHHHHHHHHHHHHHHhcC----CeeecCCcceEEEEeC
Confidence            3444444444455666777777778763         67778888999999999998862    5555567788887655


Q ss_pred             --CHHHH-HHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 --NATQV-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 --~~~qv-~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                        +.+++ ++|.++++|++.+.      |  ||+++. +..+++...++|.++
T Consensus       334 ~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l~~l~~~  385 (389)
T 1o4s_A          334 RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDF  385 (389)
T ss_dssp             SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence              45544 56777889998643      2  889885 777788887777664

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=96.48  E-value=0.01  Score=57.38  Aligned_cols=99  Identities=11%  Similarity=0.117  Sum_probs=74.8

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHHHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQVEKLIK   95 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~qv~~L~~   95 (420)
                      +++..+...+...|.+    .+|   ++.+++++...|+.|.+.|++.  | .|. +....|+|.+..+ +.+++...-.
T Consensus       256 ~~~~~~~~a~~~~l~~----~~~---~~~~~~~~~~~~~~l~~~l~~~--~-g~~-~~~~~~~~~~~~~~~~~~l~~~l~  324 (367)
T 3euc_A          256 NVNVLTEATALFALEH----VAV---LDEQAAQLRAERSRVAEGMAAH--G-GVT-VFPSAANFLLARVPDAAQTFDRLL  324 (367)
T ss_dssp             CCCHHHHHHHHHHHTT----HHH---HHHHHHHHHHHHHHHHHHHHTS--T-TCE-ECCCSSSEEEEECSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcC----HHH---HHHHHHHHHHHHHHHHHHHHhC--C-CcE-ECCCCCeEEEEECCCHHHHHHHHH
Confidence            4677778888888887    334   6677889999999999999875  2 255 5667888888777 4555554447


Q ss_pred             hcceEEcCCC----------ceecccCCcCCHHHHHHHHHhhC
Q psy16707         96 EHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        96 ~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v~  128 (420)
                      +++|++...+          ||+++  ++.++++++++|.++-
T Consensus       325 ~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          325 ARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASL  365 (367)
T ss_dssp             TTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred             HCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHh
Confidence            7899986432          88877  8899999999998863

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=96.46  E-value=0.014  Score=57.16  Aligned_cols=112  Identities=13%  Similarity=0.152  Sum_probs=79.6

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-   83 (420)
                      ..+....+....++|..+...+...|.+       .+.++.++++++..|+.|.+.|++.+..   ..+..+.|+|.+. 
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~  319 (391)
T 3h14_A          250 RVVERIAQNMFICAPHASQVAALAALDC-------DAELQANLDVYKANRKLMLERLPKAGFT---RIAPPDGAFYVYAD  319 (391)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHHHHHHHHHTCC---CBCCCCBTTEEEEE
T ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHhCC-------hHHHHHHHHHHHHHHHHHHHHHHHcCCC---cccCCCeeEEEEEe
Confidence            4555666666677888887777777763       2456778899999999999999887421   2234566788776 


Q ss_pred             ----CCCHHHH-HHHHHhcceEEcC-----------CCceecccCCcCCHHHHHHHHHhh
Q psy16707         84 ----GLNATQV-EKLIKEHSVYLTK-----------DGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 ----gL~~~qv-~~L~~~~~IY~~~-----------~GRinvagl~~~ni~~va~ai~~v  127 (420)
                          +.+.+++ ++|.++++|++.+           .=||+++. +...++...++|.++
T Consensus       320 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~  378 (391)
T 3h14_A          320 VSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAF  378 (391)
T ss_dssp             CTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             cCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence                4556555 6777888999853           12678777 777888888877765

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=96.45  E-value=0.028  Score=55.68  Aligned_cols=88  Identities=14%  Similarity=0.243  Sum_probs=56.0

Q ss_pred             CchHHHHHHHHHHHccCCCCCCCC--CCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecc
Q psy16707        178 YVLPSVKQADEIVLNKNLDKEYAP--IIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGI  255 (420)
Q Consensus       178 ~~~~~V~~a~~~~~~~~~~~~Y~p--~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~  255 (420)
                      +.++...++..........+.|..  .....+|++++++++ |.+       .+                      +.+.
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-g~~-------~~----------------------i~~~   81 (389)
T 3acz_A           32 FCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIE-GAA-------GS----------------------AAFG   81 (389)
T ss_dssp             BCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHH-TCS-------EE----------------------EEES
T ss_pred             eecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHh-CCC-------eE----------------------EEeC
Confidence            344444444333322223455654  334568999999876 322       11                      5678


Q ss_pred             cchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH----HhhcCcc
Q psy16707        256 SGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       256 gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i----~~~aG~~  298 (420)
                      +|+.|+..++..+  +.| ||.|++++|+|+.+...    ++..|++
T Consensus        82 sG~~ai~~~~~~~--~~~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~  125 (389)
T 3acz_A           82 SGMGAISSSTLAF--LQK-GDHLIAGDTLYGCTVSLFTHWLPRFGIE  125 (389)
T ss_dssp             SHHHHHHHHHTTT--CCT-TCEEEEESSCCHHHHHHHHHHHHHTTCE
T ss_pred             CHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence            8999998887533  457 89999999999976655    4556664

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=96.45  E-value=0.01  Score=57.69  Aligned_cols=112  Identities=20%  Similarity=0.225  Sum_probs=76.8

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++........+++..+...+...|.+..     .+.++.++++++..|+.|.+.|++.+    |..+..+.|+|.+.-+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  313 (370)
T 2z61_A          243 AILKLQQNLFISAPTISQYAALKAFEKET-----EREINSMIKEFDRRRRLVLKYVKDFG----WEVNNPIGAYYVFPNI  313 (370)
T ss_dssp             HHHHHHHHHTSSSCHHHHHHHGGGGSHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCBTTEECCBC
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHHhccC-----HHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCcceEEEEec
Confidence            34444444444566666666666665311     23467788899999999999998762    5555667799888766


Q ss_pred             C--HHH-HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 N--ATQ-VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~--~~q-v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .  .++ ++.|.++++|++.+        .+  ||+++ .+..+++..+++|.++
T Consensus       314 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~  367 (370)
T 2z61_A          314 GEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEF  367 (370)
T ss_dssp             SSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHH
Confidence            3  444 56677788999864        23  88988 6788888888887764

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=96.44  E-value=0.0094  Score=59.50  Aligned_cols=120  Identities=11%  Similarity=0.130  Sum_probs=81.6

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .+....+....++|..+...+...|.+. ....|.+.++.|+++++..|..|.+.|++.- ++-+.....+.|+|.+.-+
T Consensus       283 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~p~~g~~~~~~~  360 (425)
T 2r2n_A          283 RVILHIQVSTLHPSTFNQLMISQLLHEW-GEEGFMAHVDRVIDFYSNQKDAILAAADKWL-TGLAEWHVPAAGMFLWIKV  360 (425)
T ss_dssp             HHHHHHHTTTCSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEECCCSBSSEEEEEE
T ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEeCCCceEEEEEEe
Confidence            3444444444566777777777777641 1235677889999999999999999998742 2222334568899987654


Q ss_pred             C----HHH-HHHHHHhcceEEcC-----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 N----ATQ-VEKLIKEHSVYLTK-----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~----~~q-v~~L~~~~~IY~~~-----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .    .++ +..+-.+++|++.+           .+  |||++..+..+++..+++|.++
T Consensus       361 ~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~  420 (425)
T 2r2n_A          361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQL  420 (425)
T ss_dssp             TTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            3    334 33333578998853           23  8898877889999999888765

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=96.44  E-value=0.0047  Score=60.29  Aligned_cols=114  Identities=15%  Similarity=0.048  Sum_probs=78.1

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      .++........+++..+...+...|...    .|.+.++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  314 (381)
T 1v2d_A          243 RLAGMRQWTSFSAPTPLQAGVAEALKLA----RREGFYEALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAEL  314 (381)
T ss_dssp             HHHHHHHHHTSSCCHHHHHHHHHHHHHH----HHTTHHHHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEEC
T ss_pred             HHHHHHhhcccCCCcHHHHHHHHHHhCc----ccHHHHHHHHHHHHHHHHHHHHHHHHCC----CEecCCCcceEEEEec
Confidence            3443333333445555555555555422    2344577788999999999999998843    5556667788887766


Q ss_pred             CHHHHHHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhhC
Q psy16707         86 NATQVEKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        86 ~~~qv~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v~  128 (420)
                      .+.++..+-++++|++.+          .+  ||+++. +..+++.++++|.++-
T Consensus       315 ~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l  368 (381)
T 1v2d_A          315 PGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVV  368 (381)
T ss_dssp             TTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred             ChHhHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence            432377777889999853          23  889887 8889999999998873

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=96.39  E-value=0.018  Score=56.98  Aligned_cols=110  Identities=9%  Similarity=0.143  Sum_probs=77.7

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccccccceeecC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH-ITDQIGMFCYTG   84 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~-i~~Q~GmFs~~g   84 (420)
                      .++...+... +++..+...+...|...   ..|   ++.+++++...|+.|.+.|++.+    |.. +..+.|+|.+..
T Consensus       266 ~l~~~~~~~~-~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  334 (409)
T 2gb3_A          266 HAMKLAQGRL-APPLLEQIGSVGLLNLD---DSF---FDFVRETYRERVETVLKKLEEHG----LKRFTKPSGAFYITAE  334 (409)
T ss_dssp             HHHHHHHHSC-CCCHHHHHHHHHHHTCC---HHH---HHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSBSSEEEEE
T ss_pred             HHHHHHhccC-CCCHHHHHHHHHHHhcc---HHH---HHHHHHHHHHHHHHHHHHHHHcC----ceeeeCCCeeEEEEEE
Confidence            3444444444 67777777788888652   334   56678888999999999998862    555 556779998764


Q ss_pred             C---CHHHH-HHHHHh-----cceEEcC-----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 L---NATQV-EKLIKE-----HSVYLTK-----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L---~~~qv-~~L~~~-----~~IY~~~-----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +   +.+++ ++|.++     ++|++.+           .+  ||+++ .+..+++.++++|.++
T Consensus       335 ~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~  398 (409)
T 2gb3_A          335 LPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEG  398 (409)
T ss_dssp             CSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHH
Confidence            4   45544 678777     6999853           22  78888 8888899999888776

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=96.30  E-value=0.012  Score=58.00  Aligned_cols=110  Identities=12%  Similarity=0.104  Sum_probs=75.7

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---   83 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---   83 (420)
                      ++...+.. .++|..+...+...|.+.   .+|   ++.++++++..|+.|.+.|++.  + .|..+..+.|+|.+.   
T Consensus       273 l~~~~~~~-~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~~~~~~~~~~~~~  342 (406)
T 1xi9_A          273 IDRLARIR-LCPNTPAQFAAIAGLTGP---MDY---LKEYMKKLKERRDYIYKRLNEI--P-GISTTKPQGAFYIFPKIE  342 (406)
T ss_dssp             HHHHHHHT-CCSCSHHHHHHHHHHHSC---CHH---HHHHHHHHHHHHHHHHHHHHTS--T-TEECCCCCBSSEECCEEC
T ss_pred             HHHHHHhh-cCCCHHHHHHHHHHHhCC---cHH---HHHHHHHHHHHHHHHHHHHHhC--C-CCeeecCCeeEEEEEecC
Confidence            33333333 456666677777777421   234   6778899999999999999875  2 355566677998874   


Q ss_pred             ---CCCHHHH-HHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 ---GLNATQV-EKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 ---gL~~~qv-~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                         |.+.+++ ++|.++++|++.+.        +  ||+++ .+..+|+...++|.++
T Consensus       343 ~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~  399 (406)
T 1xi9_A          343 VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKF  399 (406)
T ss_dssp             SCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence               4455555 56777889988532        2  88987 8888888888887765

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=96.29  E-value=0.024  Score=54.84  Aligned_cols=99  Identities=16%  Similarity=0.213  Sum_probs=72.9

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec---CCCHHHHHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT---GLNATQVEK   92 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~---gL~~~qv~~   92 (420)
                      .+++..+...+...|.+.    +|   ++.++++++..|+.|.+.|++.+    |.. ....|+|.+.   +.+.+++..
T Consensus       243 ~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~-~~~~~~~~~~~~~~~~~~~l~~  310 (360)
T 3hdo_A          243 YNLDRLAQAACVAALRDQ----AY---LSECCRRIRETREWFTTELRSIG----YDV-IPSQGNYLFATPPDRDGKRVYD  310 (360)
T ss_dssp             CCSCHHHHHHHHHHHHCH----HH---HHHHHHHHHHHHHHHHHHHHHTT----CEE-CCCSSSEEEEECTTCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----CEE-cCCCccEEEEECCCCCHHHHHH
Confidence            356667777878888762    34   66788899999999999998863    433 3456666554   456677655


Q ss_pred             HHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhhC
Q psy16707         93 LIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        93 L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v~  128 (420)
                      .-.+++|++.+.+        ||+++  ++.++|++.+++.++.
T Consensus       311 ~l~~~gi~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~  352 (360)
T 3hdo_A          311 GLYARKVLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIG  352 (360)
T ss_dssp             HHHHTTEECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             HHHHCCEEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence            4467899987644        88887  8899999999999883

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=96.25  E-value=0.021  Score=55.55  Aligned_cols=108  Identities=18%  Similarity=0.166  Sum_probs=72.8

Q ss_pred             HHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-
Q psy16707          7 KKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-   85 (420)
Q Consensus         7 l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-   85 (420)
                      ++...+....+++..+...+...|.+.   .   +.++.++++++..|+.|.+.|++.     |..+..+.|+|.+.-+ 
T Consensus       252 l~~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~  320 (376)
T 2dou_A          252 LERVKGVIDFNQYAGVLRMGVEALKTP---K---EVVRGYARVYRERALGMAEALKGV-----LSLLPPRATMYLWGRLP  320 (376)
T ss_dssp             HHHHHHHHCCCSCHHHHHHHHHHHTSC---H---HHHHHHHHHHHHHHHHHHHHHTTT-----SEECCCCBSSEEEEECC
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHhCc---H---HHHHHHHHHHHHHHHHHHHHHHHh-----cCccCCCeeEEEEEECC
Confidence            333333333345556667777778762   2   346678889999999999999764     5555567788876544 


Q ss_pred             ---CHH-HHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 ---NAT-QVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ---~~~-qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                         +.+ -++.|.++ +|++.+        .+  ||+++. +..+++...++|.++
T Consensus       321 ~~~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~  374 (376)
T 2dou_A          321 EGVDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREA  374 (376)
T ss_dssp             TTCCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence               334 45677666 999863        23  889876 778888888887764

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=96.25  E-value=0.091  Score=53.80  Aligned_cols=84  Identities=14%  Similarity=0.337  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCC-CCceEEec--CC---CHHHHHHHHHhCCeEEeCC---C----c
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITD-QIGMFCYT--GL---NATQVEKLIKEHSVYLTKD---G----R  397 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~-q~GmF~~~--~l---~~~~v~~Ll~e~~Vy~~p~---g----R  397 (420)
                      +-++.+.++..++++.+.+.|++. |    ++.+.+ +.++++|.  +.   +.+..++|.++..+++.|.   |    |
T Consensus       369 ~g~~~~~~~~~~~a~~l~~~L~~~~g----~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR  444 (475)
T 3k40_A          369 ENLQAHIRRHCNFAKQFGDLCVADSR----FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLR  444 (475)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSTT----EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEE
Confidence            446677788889999999999987 4    554433 45565542  32   2355688888877777652   3    9


Q ss_pred             EEEccc--CCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGV--TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl--~~~ni~~la~AI~~vv  419 (420)
                      |++++-  +.++|+++.++|.++.
T Consensus       445 ~~~~~~~tt~~di~~~~~~i~~~~  468 (475)
T 3k40_A          445 MAICSRFTQSEDMEYSWKEVSAAA  468 (475)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHH
Confidence            998753  5678999999998764

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=96.23  E-value=0.015  Score=57.59  Aligned_cols=92  Identities=16%  Similarity=0.081  Sum_probs=49.6

Q ss_pred             CCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCC---------CCCHHHHHHHHHHHcCCCCccccCCcee
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI---------IGAPDFGKLAAQLAYGEDCPQLKDNLIS  230 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~---------~G~~~fr~a~~~~~~g~~~~~~~~~~i~  230 (420)
                      .+++.|..+.      ..++++.|.+|......+  ...|+..         ....++++++++++ |.+     ++.| 
T Consensus        17 ~~~~~Ld~~~------~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~v-   81 (432)
T 3a9z_A           17 NRKVYMDYNA------TTPLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI-GGK-----PQDI-   81 (432)
T ss_dssp             -CCEECBTTT------CCCCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH-TCC-----GGGE-
T ss_pred             CCcEEeeCCc------cCCCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc-CCC-----cCeE-
Confidence            3567777765      236677777777665532  2333321         12368999999976 432     3344 


Q ss_pred             eecccCCCCccccccccccceeecccchHHHHHHHHHHHh-c-----CCCCCEEEEcCCCCCCc
Q psy16707        231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-F-----FPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-~-----~p~gd~VlvpdP~w~ny  288 (420)
                                           +.|.|||.|+.+++..+.. +     .| ||+|++++|+|+.|
T Consensus        82 ---------------------~~~~g~t~a~~~~~~~~~~~~~~~~~~~-gd~vl~~~p~y~~~  123 (432)
T 3a9z_A           82 ---------------------IFTSGGTESNNLVIHSTVRCFHEQQTLQ-GRTVDQISPEEGTR  123 (432)
T ss_dssp             ---------------------EEESCHHHHHHHHHHHHHHHHHHHHHHC-------------CC
T ss_pred             ---------------------EEeCChHHHHHHHHHHHHhhhhhccccC-CccccccccccccC
Confidence                                 5699999999998865531 1     37 89999999999987

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=96.23  E-value=0.01  Score=59.10  Aligned_cols=105  Identities=15%  Similarity=0.147  Sum_probs=75.1

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-----~~   87 (420)
                      ..+++++..+...+...|.+   ..+|   ++.++++++.+|+.|.+.|++.  + .+..+..+.+|+.+..+     +.
T Consensus       298 ~~~~~~n~~~~~a~~aal~~---~~~~---~~~~~~~~~~~~~~l~~~L~~~--~-~i~~~~~~~~~~~~v~~~~~~~~~  368 (421)
T 3l8a_A          298 NNQHEVPTVGMIATQAAFQY---GKPW---LEELKTVIEGNIKLVIKELEAK--T-KIKVMEPEGTYLVWLDFSAYAIAQ  368 (421)
T ss_dssp             TTCSCCCHHHHHHHHHHHHH---CHHH---HHHHHHHHHHHHHHHHHHHHHH--C-SCEEECCSBSSEEEEECGGGTCCT
T ss_pred             cccCCCCHHHHHHHHHHHhc---cHHH---HHHHHHHHHHHHHHHHHHHHhC--C-CceEeCCCeeEEEEEeccccCCCH
Confidence            34556777777666666652   2455   5667788899999999999876  2 36666677777775543     33


Q ss_pred             -HHHHHHHHhcceEEcCC--------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 -TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 -~qv~~L~~~~~IY~~~~--------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                       +-++.|.++++|++.+.        +  ||+++ .+..+|+...++|.++
T Consensus       369 ~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l~~~  418 (421)
T 3l8a_A          369 PQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRIISV  418 (421)
T ss_dssp             THHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence             44667888999998642        2  89988 6888999999988876

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=96.21  E-value=0.17  Score=51.34  Aligned_cols=84  Identities=13%  Similarity=0.321  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC-CCCceEEec--CC---CHHHHHHHHHhCCeEEeCC---C----c
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT-DQIGMFCYT--GL---NATQVEKLIKEHSVYLTKD---G----R  397 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~-~q~GmF~~~--~l---~~~~v~~Ll~e~~Vy~~p~---g----R  397 (420)
                      +.++.+.+++.++++.+.+.|++. |    ++.+. ++.++++|.  +.   +.+..++|.++..+++.++   |    |
T Consensus       372 ~g~~~~~~~~~~~a~~l~~~L~~~~~----~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR  447 (486)
T 1js3_A          372 KGLQAYIRKHVQLSHEFEAFVLQDPR----FEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLR  447 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCTT----EEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----eEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEE
Confidence            346667788888999999999886 3    55443 456677653  22   3455577766655655542   2    9


Q ss_pred             EEEccc--CCCCHHHHHHHHHHHh
Q psy16707        398 ISMAGV--TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 is~agl--~~~ni~~la~AI~~vv  419 (420)
                      |++++.  +.+.|+++.++|.+++
T Consensus       448 i~~~~~~~t~~di~~~~~~l~~~~  471 (486)
T 1js3_A          448 FAICSRKVESGHVRLAWEHIRGLA  471 (486)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHH
Confidence            998653  4568999999888764

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=96.17  E-value=0.0052  Score=62.09  Aligned_cols=122  Identities=7%  Similarity=0.004  Sum_probs=83.4

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhH-HH----HHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-------CCC--
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKL-KA----QWLTEVKGMADRIISMRQSLKDNLQKE-GS-------NKP--   69 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L-~~----~W~~el~~m~~Ri~~~R~~l~~~L~~~-~~-------~~~--   69 (420)
                      ++|+.+....++++|.....++...|.+..- ..    .|.+.++.++++++..|+.|.+.|++. +.       +..  
T Consensus       272 ~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~  351 (427)
T 2hox_A          272 NNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCN  351 (427)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEET
T ss_pred             HHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccc
Confidence            4555555556677787777778888875310 00    244578888999999999999999875 21       221  


Q ss_pred             -CccccccccceeecCCC---HHHHHHHHHhcceEEcC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         70 -WNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTK-------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        70 -w~~i~~Q~GmFs~~gL~---~~qv~~L~~~~~IY~~~-------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                       |.....+.|+|.+..+.   .+.++.|.++++|++.+       .|  |||++. +..+++...+.|.++
T Consensus       352 ~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~  421 (427)
T 2hox_A          352 YFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDM  421 (427)
T ss_dssp             TTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHH
T ss_pred             cccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHH
Confidence             55566778999998885   34567777788999864       34  788875 556666666666554

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=96.15  E-value=0.0072  Score=60.26  Aligned_cols=106  Identities=15%  Similarity=0.166  Sum_probs=75.9

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccccccccceeecCCC----H-HHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYTGLN----A-TQV   90 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q~GmFs~~gL~----~-~qv   90 (420)
                      +++..+...+...|.+.    .|.+.++.++++++..|+.|.+.|++.... ..|..+..+.|+|.+.-+.    . +-+
T Consensus       291 ~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~  366 (425)
T 1vp4_A          291 CSPAITHRLAARYLERY----DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMF  366 (425)
T ss_dssp             SCCHHHHHHHHHHHHHS----CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTH
T ss_pred             CCCHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCHHHHH
Confidence            44556677777777543    356678888999999999999999875221 1366566678988876553    3 346


Q ss_pred             HHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         91 EKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        91 ~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.|.++ +|++.+          .+  ||+++..+..+++.++++|.++
T Consensus       367 ~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~  414 (425)
T 1vp4_A          367 EYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREV  414 (425)
T ss_dssp             HHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence            677766 998853          23  8999887889999999888775

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=96.12  E-value=0.019  Score=56.02  Aligned_cols=112  Identities=12%  Similarity=0.076  Sum_probs=74.4

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-   84 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-   84 (420)
                      .++...+....++|..+...+...|...   .+|   ++.++++++..|+.|.+.|++.  + .|..+..+.|+|.+.. 
T Consensus       258 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~  328 (388)
T 1j32_A          258 AATKIQGHSTSNVCTFAQYGAIAAYENS---QDC---VQEMLAAFAERRRYMLDALNAM--P-GLECPKPDGAFYMFPSI  328 (388)
T ss_dssp             HHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHH---HHHHHHHHHHHHHHHHHHHHTC--T-TCBCCCCCBTTEECCBC
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHHhCC---cHH---HHHHHHHHHHHHHHHHHHHhhC--C-CCcccCCCeeEEEEEec
Confidence            4444445444455556666666666432   233   5567889999999999999875  2 3565666778887763 


Q ss_pred             ----CCHHHH-HHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         85 ----LNATQV-EKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 ----L~~~qv-~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                          .+.+++ +.|.++++|++.+.      +  ||+++ .+..+++..+++|.++
T Consensus       329 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~-~~~~~i~~~~~~l~~~  383 (388)
T 1j32_A          329 AKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA-TDLDTIKRGMERLEKF  383 (388)
T ss_dssp             GGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec-CCHHHHHHHHHHHHHH
Confidence                455554 56777789998642      2  78886 6778888888877654

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=96.09  E-value=0.0091  Score=58.50  Aligned_cols=105  Identities=16%  Similarity=0.178  Sum_probs=74.9

Q ss_pred             HHHHhhcc-CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          7 KKILIRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         7 l~~i~R~~-yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      +....+.. +.++|......+...|.+.+           ++++++..|+.|.+.|++.+    |..+..+.|+|.+..+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----------~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~  340 (398)
T 3ele_A          276 VCGAGRALGYVCAPSLFQKMIVKCQGATG-----------DINAYKENRDLLYEGLTRIG----YHCFKPDGAFYMFVKA  340 (398)
T ss_dssp             HHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----------CHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEEC
T ss_pred             HHHHhhhccccCCCHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHcC----CeecCCCeeEEEEEEc
Confidence            33343433 56777788888888888764           35677778888888888763    5666678888776654


Q ss_pred             ---CHHHHHHHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 ---NATQVEKLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ---~~~qv~~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                         +.+++...-.+++|++.+..        ||+++ .+..+|+...++|.++
T Consensus       341 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~  392 (398)
T 3ele_A          341 LEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPAFEKI  392 (398)
T ss_dssp             SSSCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHHHHHH
Confidence               45665544468899986532        88985 7889999999888775

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=96.09  E-value=0.11  Score=51.58  Aligned_cols=70  Identities=14%  Similarity=0.151  Sum_probs=49.7

Q ss_pred             CCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707        196 DKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP  273 (420)
Q Consensus       196 ~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p  273 (420)
                      .|.|.  +.....+|++.+++++ |.+       .+                      +.+.|||.|+..++..+  +.|
T Consensus        57 ~~~y~r~~~~~~~~l~~~la~~~-g~~-------~~----------------------~~~~sGt~A~~~al~~~--~~~  104 (392)
T 3qhx_A           57 GYEYARTGNPTRTALEAALAAVE-DAA-------FG----------------------RAFSSGMAAADCALRAM--LRP  104 (392)
T ss_dssp             TBCBTTTCCHHHHHHHHHHHHHT-TCS-------EE----------------------EEESSHHHHHHHHHHHH--CCT
T ss_pred             CccccCCCChHHHHHHHHHHHHh-CCC-------cE----------------------EEECCHHHHHHHHHHHH--hCC
Confidence            45565  3344567888888865 322       12                      66899999999887644  457


Q ss_pred             CCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        274 GEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       274 ~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                       ||.|++++|+|+.+...+    +..|++
T Consensus       105 -gd~Vi~~~~~y~~~~~~~~~~~~~~g~~  132 (392)
T 3qhx_A          105 -GDHVVIPDDAYGGTFRLIDKVFTGWNVE  132 (392)
T ss_dssp             -TCEEEEETTCCHHHHHHHHHTGGGGTCE
T ss_pred             -CCEEEEeCCCcchHHHHHHHHHHhcCcE
Confidence             999999999999877666    445653

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=96.03  E-value=0.018  Score=56.07  Aligned_cols=104  Identities=18%  Similarity=0.245  Sum_probs=74.5

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-CHHH-
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-NATQ-   89 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-~~~q-   89 (420)
                      +..| +++..+...+...|.+.+.  +   .++.++++++..|+.|.+.|++.+  + +..+....|+|.+..+ +.++ 
T Consensus       240 ~~~~-~~~~~~~~a~~~~l~~~~~--~---~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~l  310 (356)
T 1fg7_A          240 IAPY-PLSTPVADIAAQALSPQGI--V---AMRERVAQIIAEREYLIAALKEIP--C-VEQVFDSETNYILARFKASSAV  310 (356)
T ss_dssp             SCSS-CSCHHHHHHHHHHTSHHHH--H---HHHHHHHHHHHHHHHHHHHHHHST--T-EEEECCCSSSEEEEEETTHHHH
T ss_pred             cCCC-CCCHHHHHHHHHHhcCccH--H---HHHHHHHHHHHHHHHHHHHHHhCC--C-ceEECCCCCeEEEEECCCHHHH
Confidence            4455 5666777888888876443  1   377888999999999999998864  1 2234456788877665 4444 


Q ss_pred             HHHHHHhcceEEcC-C------C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTK-D------G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~-~------G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++.| .+++|++.+ .      |  ||+++  ++.+++++++++.++
T Consensus       311 ~~~L-~~~gI~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          311 FKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALRAE  354 (356)
T ss_dssp             HHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred             HHHH-HHCCEEEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence            4566 688999876 2      3  78887  578899999998764

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=95.97  E-value=0.011  Score=59.12  Aligned_cols=64  Identities=16%  Similarity=0.028  Sum_probs=44.3

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707        201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV  280 (420)
Q Consensus       201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv  280 (420)
                      |..+..+|++++++++-+.       +.                       +.+.+|+.|+..++. +  +.| ||.|++
T Consensus        65 ~~p~~~~l~~~la~~~g~~-------~~-----------------------i~~~sG~~ai~~~~~-l--~~~-gd~Vl~  110 (403)
T 3cog_A           65 GNPTRNCLEKAVAALDGAK-------YC-----------------------LAFASGLAATVTITH-L--LKA-GDQIIC  110 (403)
T ss_dssp             -CHHHHHHHHHHHHHHTCS-------EE-----------------------EEESCHHHHHHHHHT-T--SCT-TCEEEE
T ss_pred             CCchHHHHHHHHHHHhCCC-------cE-----------------------EEECCHHHHHHHHHH-H--hCC-CCEEEE
Confidence            3456789999999987332       11                       456677888888876 3  457 999999


Q ss_pred             cCCCCCCcHHHH----hhcCcc
Q psy16707        281 PTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       281 pdP~w~ny~~i~----~~aG~~  298 (420)
                      ++|+|+.+...+    +..|++
T Consensus       111 ~~~~y~~~~~~~~~~~~~~G~~  132 (403)
T 3cog_A          111 MDDVYGGTNRYFRQVASEFGLK  132 (403)
T ss_dssp             ESSCCHHHHHHHHHTGGGGTCE
T ss_pred             eCCCcchHHHHHHHHHHHcCCE
Confidence            999998644433    345654

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=95.96  E-value=0.02  Score=55.50  Aligned_cols=105  Identities=10%  Similarity=0.096  Sum_probs=73.7

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNAT   88 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~   88 (420)
                      .+++++..+...+...|.+.   .+|   ++.++++++..|+.|.+.|++.- + .|..+..+.|||.+.     +.+.+
T Consensus       269 ~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~  340 (391)
T 4dq6_A          269 DIKRNNCFSLVATEASYNNG---ESW---LESFLEYLESNIDFAIKYINENM-P-KLKVRKPEGTYLLWVDFSALGLSDE  340 (391)
T ss_dssp             TCCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHHC-T-TSEECCCSBSSEEEEECGGGCCCHH
T ss_pred             cCCCCCHHHHHHHHHHHhch---HHH---HHHHHHHHHHHHHHHHHHHHhhC-C-CCEecCCCccEEEEEEhhhcCCCHH
Confidence            34567777776666666532   344   66788899999999999998732 1 367777788888755     34454


Q ss_pred             H-HHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707         89 Q-VEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        89 q-v~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v  127 (420)
                      + ++.|.++|+|++.+.          =||+++ .+..+++..+++|.++
T Consensus       341 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~  389 (391)
T 4dq6_A          341 ELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRIKNA  389 (391)
T ss_dssp             HHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHHHHH
Confidence            4 567877889998531          278877 6778888888888764

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=95.94  E-value=0.089  Score=51.55  Aligned_cols=65  Identities=14%  Similarity=0.214  Sum_probs=45.2

Q ss_pred             CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEE
Q psy16707        201 PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYV  280 (420)
Q Consensus       201 p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlv  280 (420)
                      |..+..+|++++++++ |.+      +.                       +.+.+||.|+.+++..+  +.| ||.|++
T Consensus        50 ~~~~~~~l~~~la~~~-~~~------~~-----------------------i~~~sGt~a~~~~~~~~--~~~-g~~vl~   96 (386)
T 1cs1_A           50 GNPTRDVVQRALAELE-GGA------GA-----------------------VLTNTGMSAIHLVTTVF--LKP-GDLLVA   96 (386)
T ss_dssp             CCHHHHHHHHHHHHHH-TCS------EE-----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEE
T ss_pred             CCccHHHHHHHHHHHh-CCC------cE-----------------------EEeCCHHHHHHHHHHHH--hCC-CCEEEE
Confidence            4556789999999987 321      11                       33566699999988755  457 899999


Q ss_pred             cCCCCCCcHHH----HhhcCcc
Q psy16707        281 PTPTWGNHIPI----CKHTGLE  298 (420)
Q Consensus       281 pdP~w~ny~~i----~~~aG~~  298 (420)
                      ++|+|+.....    ++..|++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~g~~  118 (386)
T 1cs1_A           97 PHDCYGGSYRLFDSLAKRGCYR  118 (386)
T ss_dssp             ETTCCHHHHHHHHHHHTTTSCE
T ss_pred             ecCCcHhHHHHHHHHHHhcCCE
Confidence            99999963332    3445553

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=95.81  E-value=0.069  Score=51.79  Aligned_cols=86  Identities=10%  Similarity=0.094  Sum_probs=61.4

Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-c----cccceeec---CCCHHHH-HHHHHhcceEEcCC---
Q psy16707         38 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-D----QIGMFCYT---GLNATQV-EKLIKEHSVYLTKD---  104 (420)
Q Consensus        38 ~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~----Q~GmFs~~---gL~~~qv-~~L~~~~~IY~~~~---  104 (420)
                      .|.++ ++.++++++.+|+.|.+.|++.+    +..+. .    ..+|+++.   |.+.+++ +.|.++|+|++...   
T Consensus       262 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~  337 (392)
T 2z9v_A          262 LYLNEGPEAVWARHALTAKAMRAGVTAMG----LSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE  337 (392)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG
T ss_pred             HHHhccHHHHHHHHHHHHHHHHHHHHHcC----CeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC
Confidence            45555 88999999999999999998763    33332 2    23444442   5666655 56777779998643   


Q ss_pred             ---C--ceec-c-cCCcCCHHHHHHHHHhh
Q psy16707        105 ---G--RISM-A-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ---G--Rinv-a-gl~~~ni~~va~ai~~v  127 (420)
                         +  ||++ + ..+..++++++++|.++
T Consensus       338 ~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~  367 (392)
T 2z9v_A          338 TLGKLTRIGHMGPTAQPIYAIAALTALGGA  367 (392)
T ss_dssp             GTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence               2  7884 4 58999999999999887

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=95.81  E-value=0.021  Score=56.40  Aligned_cols=101  Identities=17%  Similarity=0.260  Sum_probs=69.0

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-------CH-
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA-   87 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-------~~-   87 (420)
                      .+++..+...+...|.+.   .+|   ++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..+       +. 
T Consensus       276 ~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~  345 (412)
T 2x5d_A          276 YGTFTPLQVAAIAALEGD---QQC---VRDIARQYQQRRDVLVKGLREAG----WMVENPKASMYVWAKIPEPYAHLGSL  345 (412)
T ss_dssp             CCCCHHHHHHHHHHHHSC---SHH---HHHHHHHHHHHHHHHHHHHHHHT----CCCCCCSBSSEEEEECCTTTGGGCHH
T ss_pred             cCCCHHHHHHHHHHHhCC---HHH---HHHHHHHHHHHHHHHHHHHHHCC----CEecCCCeeeEEEEEcCCccCCCCHH
Confidence            344445555555666543   134   66778899999999999998863    5555667798876544       33 


Q ss_pred             HHHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 TQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +-++.|.++++|++.+        .+  ||+++. +...++...+.|.++
T Consensus       346 ~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~  394 (412)
T 2x5d_A          346 EFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAM  394 (412)
T ss_dssp             HHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence            3456677788999863        22  889887 777777777776665

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=95.77  E-value=0.021  Score=57.53  Aligned_cols=103  Identities=12%  Similarity=0.111  Sum_probs=67.5

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-------
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-------   86 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-------   86 (420)
                      .|+. |......+...|.+.    .+.+.++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..++       
T Consensus       305 ~~~~-~~~~~~a~~~aL~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~p~~  375 (447)
T 3b46_A          305 CFAS-PSPLQEACANSINDA----LKIGYFEKMRQEYINKFKIFTSIFDELG----LPYTAPEGTYFVLVDFSKVKIPED  375 (447)
T ss_dssp             TSSC-CHHHHHHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECTTCCCCTT
T ss_pred             cCCC-ChHHHHHHHHHHhCC----cchHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecccccCccc
Confidence            4444 444444555555432    1233467788999999999999998874    55566788998876543       


Q ss_pred             ------------H-HHHHHHHHhcceEEcCC-------------C--ceecccCCcCCHHHHHHHHHh
Q psy16707         87 ------------A-TQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        87 ------------~-~qv~~L~~~~~IY~~~~-------------G--Rinvagl~~~ni~~va~ai~~  126 (420)
                                  . +-+++|.++++|++.+.             +  ||+++. +..+|+..++.|.+
T Consensus       376 ~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~-~~e~l~~~~~~l~~  442 (447)
T 3b46_A          376 YPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK-DDAYLENAVERLKL  442 (447)
T ss_dssp             CCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS-CHHHHHHHHHHGGG
T ss_pred             cccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC-CHHHHHHHHHHHHH
Confidence                        2 34456878899998642             3  778774 66666666666554

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=95.77  E-value=0.025  Score=55.36  Aligned_cols=104  Identities=13%  Similarity=0.163  Sum_probs=70.6

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCHHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNATQ   89 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-----L~~~q   89 (420)
                      +++++..+...+...|.+.   .+|   ++.++++++..|+.|.+.|++. .|+ |..+..+.|||.+.-     .+.++
T Consensus       270 ~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  341 (399)
T 1c7n_A          270 GMPFTTLGYKACEICYKEC---GKW---LDGCIKVIDKNQRIVKDFFEVN-HPE-IKAPLIEGTYLQWIDFRALKMDHKA  341 (399)
T ss_dssp             CCCCCHHHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHH-CTT-SBCCCCSBSSEEEEECGGGCCCHHH
T ss_pred             cCCCCHHHHHHHHHHHhCC---hHH---HHHHHHHHHHHHHHHHHHHHhh-CCC-CeEecCCceEEEEEEcccCCCCHHH
Confidence            4567777777777777532   344   5677888999999999999873 122 555666778876543     34554


Q ss_pred             -HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         90 -VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 -v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                       ++.|.++++|++.+        .+  ||+++.. ..+++...+.|.++
T Consensus       342 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~-~~~l~~~l~~l~~~  389 (399)
T 1c7n_A          342 MEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP-SSVIQESLERLNKA  389 (399)
T ss_dssp             HHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC-HHHHHHHHHHHHHH
Confidence             46676788999864        23  8898865 66777777776654

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=95.77  E-value=0.027  Score=54.65  Aligned_cols=105  Identities=12%  Similarity=0.185  Sum_probs=73.5

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNAT   88 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~   88 (420)
                      .+++++..+...+...|.+.   .+|   ++.++++++..|+.|.+.|++.- + .|..+..+.|+|.+.     |.+.+
T Consensus       265 ~~~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~  336 (391)
T 3dzz_A          265 GIGEPNLLAIPAAIAAYEEG---HDW---LRELKQVLRDNFAYAREFLAKEV-P-EVKVLDSNASYLAWVDISALGMNAE  336 (391)
T ss_dssp             TCSSCCTTHHHHHHHHHHHC---HHH---HHHHHHHHHHHHHHHHHHHHHHC-T-TSEECCCCBSSEEEEECGGGCSCHH
T ss_pred             ccCCCCHHHHHHHHHHHhcc---HHH---HHHHHHHHHHHHHHHHHHHHhhC-C-CcEEeccCceEEEEEehhhcCCCHH
Confidence            34556666666666666431   334   67778899999999999998731 1 266667788888764     45555


Q ss_pred             HH-HHHHHhcceEEcCCC----------ceecccCCcCCHHHHHHHHHhh
Q psy16707         89 QV-EKLIKEHSVYLTKDG----------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        89 qv-~~L~~~~~IY~~~~G----------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++ ++|.++++|++.+.+          ||+++ .+..+++...++|.++
T Consensus       337 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~  385 (391)
T 3dzz_A          337 DFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQRLKQG  385 (391)
T ss_dssp             HHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence            54 556678999987432          88988 5788888888888775

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=95.74  E-value=0.033  Score=53.76  Aligned_cols=96  Identities=11%  Similarity=0.108  Sum_probs=69.3

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCccccccccceeecCC--CHHHH-HH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQK-EGSNKPWNHITDQIGMFCYTGL--NATQV-EK   92 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~-~~~~~~w~~i~~Q~GmFs~~gL--~~~qv-~~   92 (420)
                      +++..+...+...|.+.    +   .++.+++++...|+.|.+.|++ .+    |.. ....|+|.+..+  +.+++ +.
T Consensus       255 ~~~~~~~~~~~~~l~~~----~---~~~~~~~~~~~~~~~l~~~l~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~  322 (363)
T 3ffh_A          255 NTTSIGQKLAIEAIKDQ----A---FIGECRTSNANGIKQYEAFAKRFEK----VKL-YPANGNFVLIDLGIEAGTIFSY  322 (363)
T ss_dssp             CCBHHHHHHHHHHHHCH----H---HHHHHHHHHHHHHHHHHHHHHHCTT----CEE-CCCCSSEEEEECSSCHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCH----H---HHHHHHHHHHHHHHHHHHHHhhCCC----ceE-CCCCCeEEEEECCCCHHHHHHH
Confidence            56667777788888753    3   4567788999999999999987 33    443 345677777666  44554 45


Q ss_pred             HHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         93 LIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        93 L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      |. +++|++.+..        ||+++  ++.++++++++|.++
T Consensus       323 l~-~~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          323 LE-KNGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL  362 (363)
T ss_dssp             HH-HTTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             HH-HCCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence            54 6799987532        78876  888999999999875

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=95.68  E-value=0.18  Score=51.09  Aligned_cols=83  Identities=12%  Similarity=0.122  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCcccCCCCceEEe-cCCC---HHHHHHHHHhCCe---EEe-------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKE----GSNKPWNHITDQIGMFCY-TGLN---ATQVEKLIKEHSV---YLT-------  393 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~----g~~~~w~~i~~q~GmF~~-~~l~---~~~v~~Ll~e~~V---y~~-------  393 (420)
                      +.++.+.+++.+.|+.+.+.|++.    |    +..+.++ +.+++ ++.+   .+..+.|. +.+|   -+.       
T Consensus       346 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g----~~v~~~~-~~v~~~~~~~~~~~~l~~~L~-~~gi~~~rv~~~~g~f~  419 (456)
T 2z67_A          346 KNYLELVKNQKNSKKLLDELLNDLSKKTG----GKFLDVE-SPIASCISVNSDPVEIAAKLY-NLRVTGPRGIKKTDHFG  419 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSS----CCBCCCC-CSSEEEEECSSCHHHHHHHHH-HTTEESCEEECTTCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccC----CEecCCC-CeEEEEEecccHHHHHHHHHH-HcCCCcceEEeecCccc
Confidence            345666788899999999999887    6    3444444 55443 2112   35556665 4453   343       


Q ss_pred             -------CCC--cEEEc-ccCCCCHHHHHHHHHHHhC
Q psy16707        394 -------KDG--RISMA-GVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       394 -------p~g--Ris~a-gl~~~ni~~la~AI~~vv~  420 (420)
                             +.+  |+|++ +.+.+.|+++.++|+++++
T Consensus       420 G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~~  456 (456)
T 2z67_A          420 NCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKILL  456 (456)
T ss_dssp             HTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC--
T ss_pred             cccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHhC
Confidence                   333  78877 5688999999999988653

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=95.63  E-value=0.029  Score=55.09  Aligned_cols=103  Identities=8%  Similarity=0.088  Sum_probs=65.5

Q ss_pred             CCCchHHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCC---Cc-eEEecCCCHHHH
Q psy16707        307 SSPPIHGARIVQEILGDPKLKAQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IG-MFCYTGLNATQV  381 (420)
Q Consensus       307 s~pp~~ga~iv~~IL~dp~L~~~w~~e-l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q---~G-mF~~~~l~~~~v  381 (420)
                      .+||..++..+...|     + ...++ ++.+.++++++++.+.+.|+++|    +..+.++   .+ +..+..-+.+..
T Consensus       251 ~t~~~~~~~a~~aal-----~-~~~~~g~~~~~~~~~~l~~~l~~~l~~~g----~~~~~~~~~~~~~i~~~~~~~~~~~  320 (379)
T 3ke3_A          251 ATMPTDSLRQFRDAI-----L-EAKEIGFDILRDAQWELGNRVRKVLTDKG----IESVAAEGFEAPGVVVSYTERDDMH  320 (379)
T ss_dssp             SCCCHHHHHHHHHHH-----H-HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSBCTTCBCSSEEEEECSCHHHH
T ss_pred             CCCCHHHHHHHHHHH-----H-HHHHhcHHHHHHHHHHHHHHHHHHHHHcC----CEecCCccccCceEEEEccCCcchH
Confidence            366666655444323     2 11233 67788999999999999999987    4433332   22 222222233331


Q ss_pred             -HHHHHhCCeEEeCC----------C---cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        382 -EKLIKEHSVYLTKD----------G---RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       382 -~~Ll~e~~Vy~~p~----------g---Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                       ...++++||++.++          +   ||++.+ .+.++|+++.++|.+++
T Consensus       321 ~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l  373 (379)
T 3ke3_A          321 KGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKAL  373 (379)
T ss_dssp             SSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHH
Confidence             34447889998764          2   888764 47899999999998875

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=95.62  E-value=0.022  Score=56.51  Aligned_cols=104  Identities=12%  Similarity=0.076  Sum_probs=70.2

Q ss_pred             ccchHHHHHHHHhCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------
Q psy16707         18 PPIHGARIVQEILGDP--KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------   86 (420)
Q Consensus        18 PP~hGa~iv~~IL~~~--~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------   86 (420)
                      ++......+...|.+.  .+ ..|.+.++.++++++..|+.|.+.|++.+    |..+..+.|+|.+.-+.         
T Consensus       288 ~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~  362 (429)
T 1yiz_A          288 CATPIQEAIAVGFETELKRL-KSPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSSLDSKVDLT  362 (429)
T ss_dssp             CCHHHHHHHHHHHHHHHTTT-TSTTSHHHHHHHHHHHHHHHHHHHHHHHT----CEEEECSBSSEEEEECCSSCTTTTCC
T ss_pred             CChHHHHHHHHHHhcccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEEccccccccccc
Confidence            4444455555555541  00 11244477888999999999999998863    55556677888775443         


Q ss_pred             -------HHH-HHHHHHhcceEEcC-------------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         87 -------ATQ-VEKLIKEHSVYLTK-------------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 -------~~q-v~~L~~~~~IY~~~-------------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                             .++ +++|.++++|++.+             .|  ||+++ .+..+|+..+++|.++
T Consensus       363 ~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~  425 (429)
T 1yiz_A          363 QETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF-KKDENLQKAAEILRKW  425 (429)
T ss_dssp             SSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-CCHHHHHHHHHHHHHh
Confidence                   333 45577789999864             23  78887 4888899999988876

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=95.54  E-value=0.048  Score=54.32  Aligned_cols=76  Identities=11%  Similarity=0.151  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-C----HHHHHHHHHhCCeEEeCCC----cEEEc-ccCCC
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-N----ATQVEKLIKEHSVYLTKDG----RISMA-GVTSK  406 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-~----~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~  406 (420)
                      +.++++++|+.|.+.|+++     +..+ +..|.|+++.+ +    .+.++.|+ ++||++.|+|    ||+++ ..+.+
T Consensus       330 ~~~~~~~~~~~l~~~L~~~-----~~~~-~~~g~~~~i~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~lRis~~~~~t~e  402 (419)
T 2eo5_A          330 LLPHVNEIGKIFAEELQGL-----ADDV-RGIGLAWGLEYNEKKVRDRIIGESF-KRGLLLLPAGRSAIRVIPPLVISEE  402 (419)
T ss_dssp             HHHHHHHHHHHHHHHHTTS-----SSEE-EEETTEEEEECSCHHHHHHHHHHHH-HTTEECEEETTTEEEECCCTTCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHh-----hhhe-EeeeEEEEEEEecCccHHHHHHHHH-HCCCEEecCCCCEEEEECCCCCCHH
Confidence            6788999999999999875     2222 35678887655 2    23446665 8899999854    88765 46888


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      +++.+.++|.+++
T Consensus       403 ~i~~~l~~l~~~l  415 (419)
T 2eo5_A          403 EAKQGLDILKKVI  415 (419)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998765

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=95.50  E-value=0.017  Score=57.60  Aligned_cols=93  Identities=16%  Similarity=0.069  Sum_probs=64.5

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCC--CCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccc
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPI--IGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAA  246 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~--~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~  246 (420)
                      .|+...-.++.++.++++..   . ...+.|.+.  .+..++++.+++++ |.+       .+                 
T Consensus        24 i~~s~~~~~~~~~~~~~~~~---~-~~~~~y~~~~~~~~~~l~~~la~~~-g~~-------~~-----------------   74 (412)
T 2cb1_A           24 IYAVAAYGFKTLEEGQERFA---T-GEGYVYARQKDPTAKALEERLKALE-GAL-------EA-----------------   74 (412)
T ss_dssp             CCCCSBCCCSSHHHHHHHHH---H-CCSCSBTTTCCHHHHHHHHHHHHHH-TCS-------EE-----------------
T ss_pred             ccccceeecCChHHHHHHhc---c-ccCcCcCCCCChHHHHHHHHHHHHh-CCC-------cE-----------------
Confidence            55554555677777776654   2 246788865  45788999999876 321       22                 


Q ss_pred             cccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        247 FQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       247 ~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                           +.|.|||.|+..++..+  +.| ||.|++++|+|+.+...+    +..|++
T Consensus        75 -----~~~~~gt~a~~~al~~l--~~~-gd~vi~~~~~~~~~~~~~~~~~~~~g~~  122 (412)
T 2cb1_A           75 -----VVLASGQAATFAALLAL--LRP-GDEVVAAKGLFGQTIGLFGQVLSLMGVT  122 (412)
T ss_dssp             -----EEESSHHHHHHHHHHTT--CCT-TCEEEEETTCCHHHHHHHHHTTTTTTCE
T ss_pred             -----EEECCHHHHHHHHHHHH--hCC-CCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence                 67999999999988644  457 899999999998655443    345653

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=95.46  E-value=0.051  Score=53.09  Aligned_cols=90  Identities=12%  Similarity=0.131  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceeec--CCCHHHHHHHHHhcceEEcCC-----
Q psy16707         35 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----  104 (420)
Q Consensus        35 L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~-----  104 (420)
                      ++.+|.+.++.++++++.+|+.|.+.|++..  + +..+..   +.||+++.  +.+.+++...-.+++|++...     
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~~~~~  369 (406)
T 3cai_A          293 RRERLAVSMQSADAYLNRVFDYLMVSLRSLP--L-VMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRV  369 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--T-EEECCCCSSBCSEEEEEETTBCHHHHHHHHHHTTEECEECCSCHH
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEcCCccccCCEEEEEECCcCHHHHHHHHHHCCcEEecCChHHH
Confidence            4567877899999999999999999998742  1 332222   35666653  666776654335689988631     


Q ss_pred             ------------CceecccCC-cCCHHHHHHHHHhh
Q psy16707        105 ------------GRISMAGVT-SKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ------------GRinvagl~-~~ni~~va~ai~~v  127 (420)
                                  -||++...+ ..++++++++|.++
T Consensus       370 ~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          370 LDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             HHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             HHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence                        377877654 57999999998875

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=95.41  E-value=0.035  Score=53.79  Aligned_cols=101  Identities=12%  Similarity=0.092  Sum_probs=67.4

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CH-HHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NA-TQVE   91 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~-~qv~   91 (420)
                      +++.....++...|.+      +.+.++.++++++..|+.|.+.|++.   ..+..+..+.|+|.+..+    +. +.++
T Consensus       254 ~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
T 3op7_A          254 CAGVFDDLVAQLALAH------YQEILERNRHILEENLAILDQWIEEE---PLVSYIRPAVVSTSFVKIAVDMPMEDFCL  324 (375)
T ss_dssp             CCCHHHHHHHHHHHHT------HHHHHHHHHHHHHHHHHHHHHHHHHC---TTEEECCCSSSSCEEEEECCSSCHHHHHH
T ss_pred             CCCcHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHhhC---CCceEecCCCeEEEeEEcCCCCCHHHHHH
Confidence            4445555556555543      44557778888899999999999873   235556667777776533    33 4456


Q ss_pred             HHHHhcceEEcCCC--------ceecccCCcCCHHHHHHHHHhh
Q psy16707         92 KLIKEHSVYLTKDG--------RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        92 ~L~~~~~IY~~~~G--------Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .|.++++|++.+.+        ||+++.-+ .+++...++|.++
T Consensus       325 ~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~-~~i~~~l~~l~~~  367 (375)
T 3op7_A          325 QLLQEHGVLLVPGNRFERDGYVRLGFACEQ-ETLIKGLEKLSQF  367 (375)
T ss_dssp             HHHHHHCEECEEGGGGTCTTEEEECCCSCH-HHHHHHHHHHHHH
T ss_pred             HHHHhCCEEEeChhhhCCCCeEEEEecCCH-HHHHHHHHHHHHH
Confidence            77788999986432        67766544 6777777777665

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=95.34  E-value=0.09  Score=50.68  Aligned_cols=82  Identities=20%  Similarity=0.287  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc----cccccceeec----CCCHHHH-HHHHHhcceEEcCC------C-
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI----TDQIGMFCYT----GLNATQV-EKLIKEHSVYLTKD------G-  105 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i----~~Q~GmFs~~----gL~~~qv-~~L~~~~~IY~~~~------G-  105 (420)
                      .++.+.++++.+|+.|.+.|++.+    +..+    ..+.+++...    +.+.+++ +.|.++++|++...      + 
T Consensus       284 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~  359 (393)
T 3kgw_A          284 GLENCWRRHREATAHLHKHLQEMG----LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERV  359 (393)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTT----CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcC----CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCE
Confidence            378899999999999999999873    2222    2233443322    5566655 57878889998752      2 


Q ss_pred             -ceecccC--CcCCHHHHHHHHHhh
Q psy16707        106 -RISMAGV--TSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 -Rinvagl--~~~ni~~va~ai~~v  127 (420)
                       ||++.|.  +..+++.++++|.++
T Consensus       360 iRi~~~~~~~~~~~i~~~~~~l~~~  384 (393)
T 3kgw_A          360 LRIGLLGYNATTENVDRVAEALREA  384 (393)
T ss_dssp             EEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred             EEEEecccCCCHHHHHHHHHHHHHH
Confidence             7887564  789999999998876

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=95.31  E-value=0.058  Score=52.11  Aligned_cols=82  Identities=20%  Similarity=0.234  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---cccccceeec---CCCHHH-HHHHHHhcceEEcCCC-----ceecc
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT---GLNATQ-VEKLIKEHSVYLTKDG-----RISMA  110 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i---~~Q~GmFs~~---gL~~~q-v~~L~~~~~IY~~~~G-----Rinva  110 (420)
                      ++.++++++.+|+.|.+.|++..   .|..+   ..+.+||++.   |.+.++ ++.| .+++|++...+     ||++.
T Consensus       295 ~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~iRis~~  370 (390)
T 1elu_A          295 AEERYQAICQRSEFLWRGLNQLP---HVHCLATSAPQAGLVSFTVDSPLGHRAIVQKL-EEQRIYLRTIADPDCIRACCH  370 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHST---TEEESCSSCCSSSEEEEEECSSSCHHHHHHHH-HHTTEECEEETTTTEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC---CcEEecCccccccEEEEEcCCCCCHHHHHHHH-HHCCEEEEecCCCCeEEEecc
Confidence            88899999999999999998752   25544   2356777763   445555 4566 57799987543     78873


Q ss_pred             -cCCcCCHHHHHHHHHhhC
Q psy16707        111 -GVTSKNVGYLAKAIHANG  128 (420)
Q Consensus       111 -gl~~~ni~~va~ai~~v~  128 (420)
                       ..+..++++++++|.+++
T Consensus       371 ~~~~~~~i~~~~~~l~~~~  389 (390)
T 1elu_A          371 YITDEEEINHLLARLADFG  389 (390)
T ss_dssp             TTCCHHHHHHHHHHHTTCC
T ss_pred             cCCCHHHHHHHHHHHHhhC
Confidence             478899999999998764

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=95.27  E-value=0.049  Score=53.71  Aligned_cols=81  Identities=12%  Similarity=0.163  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CHHHH-HHHHHhcceEEcC------------
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NATQV-EKLIKEHSVYLTK------------  103 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~~~qv-~~L~~~~~IY~~~------------  103 (420)
                      ++.++++++..|+.|.+.|++.+    |..+..+.|+|.+..+      +.+++ ++|.++++|++.+            
T Consensus       285 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~  360 (411)
T 2o0r_A          285 VAALRNSLRARRDRLAAGLTEIG----FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQA  360 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT----CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccc
Confidence            56778899999999999998763    5656667888876544      34444 5577788999842            


Q ss_pred             -------CC--ceecccCCcCCHHHHHHHHHhhC
Q psy16707        104 -------DG--RISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus       104 -------~G--Rinvagl~~~ni~~va~ai~~v~  128 (420)
                             .+  ||+++. +..+++.++++|.++.
T Consensus       361 ~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~~~~  393 (411)
T 2o0r_A          361 SQQADVWNHLVRFTFCK-RDDTLDEAIRRLSVLA  393 (411)
T ss_dssp             ----CCGGGCEEEECCS-CHHHHHHHHHHHGGGG
T ss_pred             cccccCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence                   12  788754 7778888888887764

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=95.15  E-value=0.096  Score=50.86  Aligned_cols=105  Identities=14%  Similarity=0.159  Sum_probs=69.5

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----c-ceee---cCC
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----G-MFCY---TGL   85 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----G-mFs~---~gL   85 (420)
                      .+.++|..+...+...|.     ..+.+.++.++++++..|+.|.+.|++.+    |..+..+.    | ++++   .|.
T Consensus       256 ~~~~~~~~~~~a~~~al~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~  326 (396)
T 2ch1_A          256 YHHTVASNLIFALREALA-----QIAEEGLENQIKRRIECAQILYEGLGKMG----LDIFVKDPRHRLPTVTGIMIPKGV  326 (396)
T ss_dssp             CCCCCCHHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT----CCBSSCSGGGBCTTEEEEECCTTC
T ss_pred             CCCCCcHHHHHHHHHHHH-----HHHHhhHHHHHHHHHHHHHHHHHHHHHCC----CeeccCCccccCCceEEEEcCCCC
Confidence            445677666555554442     22234588899999999999999998873    33333332    3 3333   256


Q ss_pred             CHHHH-HHHHHhcceEEcC------CC--ceecccC--CcCCHHHHHHHHHhh
Q psy16707         86 NATQV-EKLIKEHSVYLTK------DG--RISMAGV--TSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~qv-~~L~~~~~IY~~~------~G--Rinvagl--~~~ni~~va~ai~~v  127 (420)
                      +.+++ ++|.++++|++..      .+  ||++.|.  +..+++.++++|.++
T Consensus       327 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~  379 (396)
T 2ch1_A          327 DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKES  379 (396)
T ss_dssp             CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHH
Confidence            77666 4677778998864      12  6777554  678899999999887

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=95.14  E-value=0.047  Score=53.79  Aligned_cols=102  Identities=15%  Similarity=0.141  Sum_probs=69.9

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---------CH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---------NA   87 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---------~~   87 (420)
                      +++..+...+...|.+..  ..|   ++.++++++..|+.|.+.|++.  + .|..+..+.|+|.+..+         +.
T Consensus       290 ~~~~~~~~a~~~~l~~~~--~~~---~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (416)
T 1bw0_A          290 GPCTVVQAALGEALLNTP--QEH---LDQIVAKIEESAMYLYNHIGEC--I-GLAPTMPRGAMYLMSRIDLEKYRDIKTD  361 (416)
T ss_dssp             CSCHHHHHHHHHHHHSSC--HHH---HHHHHHHHHHHHHHHHHHHTTS--T-TEEECCCCBTTEEEEEECGGGBSSCCSH
T ss_pred             CCCcHHHHHHHHHHhccc--HHH---HHHHHHHHHHHHHHHHHHHHhC--C-CCcccCCCeeEEEEEeCCHHHcCCCCCH
Confidence            455566666777666422  334   5567788889999999999764  2 25555567798877543         44


Q ss_pred             HHH-HHHHHhcceEEcC------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 TQV-EKLIKEHSVYLTK------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv-~~L~~~~~IY~~~------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +++ +.|.++++|++.+      .|  ||++ +.+..+++...+.|.++
T Consensus       362 ~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~-~~~~e~l~~~l~~l~~~  409 (416)
T 1bw0_A          362 VEFFEKLLEEENVQVLPGTIFHAPGFTRLTT-TRPVEVYREAVERIKAF  409 (416)
T ss_dssp             HHHHHHHHHHHCEECEEGGGGTCTTEEEEEC-CSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCEEEecccccCCCCeEEEEe-cCCHHHHHHHHHHHHHH
Confidence            554 6676788999864      23  8898 57888888888877664

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=95.12  E-value=0.15  Score=49.57  Aligned_cols=86  Identities=19%  Similarity=0.188  Sum_probs=59.4

Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---ccce-ee---cCCCHHHH-HHHHHhcceEEcC-----
Q psy16707         38 QWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IGMF-CY---TGLNATQV-EKLIKEHSVYLTK-----  103 (420)
Q Consensus        38 ~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q---~GmF-s~---~gL~~~qv-~~L~~~~~IY~~~-----  103 (420)
                      .+.++ ++.++++++.+|+.|.+.|++.+.    ..+..+   .+.| ++   -|.+.+++ +.|.++++|++..     
T Consensus       282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~  357 (411)
T 3nnk_A          282 LILQEGLDYGIARHKLHGDALVKGIQAMGL----ETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPL  357 (411)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTTC----CBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGG
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHcCC----EeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCC
Confidence            34555 899999999999999999988642    222221   2333 22   15667665 4578888999854     


Q ss_pred             -CC--ceecccC--CcCCHHHHHHHHHhh
Q psy16707        104 -DG--RISMAGV--TSKNVGYLAKAIHAN  127 (420)
Q Consensus       104 -~G--Rinvagl--~~~ni~~va~ai~~v  127 (420)
                       .+  ||++.|.  +.++|+.++++|.++
T Consensus       358 ~~~~iRi~~~~~~~~~~~i~~~~~~l~~~  386 (411)
T 3nnk_A          358 HGKVWRIGTMGYNARKDCVMTTLSALEAV  386 (411)
T ss_dssp             TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCccCcCCHHHHHHHHHHHHHH
Confidence             22  7787453  568899999998887

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=95.08  E-value=0.22  Score=47.82  Aligned_cols=104  Identities=13%  Similarity=0.172  Sum_probs=70.3

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----cccceeec---
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGMFCYT---   83 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~----Q~GmFs~~---   83 (420)
                      ....+|+..+...+...|.      .|.++  ++.++++++.+|+.|.+.|++.+    |..+..    ..+++++.   
T Consensus       253 ~~~~~~~~~~~~a~~~~l~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~  322 (386)
T 2dr1_A          253 STPSTPPMPQVFGINVALR------IIEKMGGKEKWLEMYEKRAKMVREGVREIG----LDILAEPGHESPTITAVLTPP  322 (386)
T ss_dssp             SCSSCCCHHHHHHHHHHHH------HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCTTCBCSSEEEEECCT
T ss_pred             CCCCCCCHHHHHHHHHHHH------HHHHhcCHHHHHHHHHHHHHHHHHHHHHcC----CeeCcCccccCCceEEEEcCC
Confidence            4445666666666655553      24554  78899999999999999998863    333332    23344442   


Q ss_pred             CCCHHHH-HHHHHhcceEEcCC--------Cceeccc-CCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQV-EKLIKEHSVYLTKD--------GRISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~qv-~~L~~~~~IY~~~~--------GRinvag-l~~~ni~~va~ai~~v  127 (420)
                      |.+.+++ ++|.++ +|++.+.        =||+++. .+..++++++++|.++
T Consensus       323 ~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  375 (386)
T 2dr1_A          323 GIKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREV  375 (386)
T ss_dssp             TCCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            5566664 567665 9998642        2788886 7889999999998876

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=95.06  E-value=0.066  Score=51.95  Aligned_cols=96  Identities=11%  Similarity=0.160  Sum_probs=70.3

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--CHHHH-HHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--NATQV-EKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--~~~qv-~~L   93 (420)
                      +++..+...+...|.+.    +|   ++.++++++..|+.|.+.|++.+    |..+ ...|+|...-+  +.+++ +.|
T Consensus       261 ~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~l~~~l  328 (369)
T 3cq5_A          261 HLSALSQAAAIVALRHS----AD---TLGTVEKLSVERVRVAARLEELG----YAVV-PSESNFVFFGDFSDQHAAWQAF  328 (369)
T ss_dssp             CSCHHHHHHHHHHHHTH----HH---HHTHHHHHHHHHHHHHHHHHHHT----CEEE-CCSSSEEEEECCSSHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCH----HH---HHHHHHHHHHHHHHHHHHHHhCC----CEEC-CCCCeEEEEECCCCHHHHHHHH
Confidence            46677777788888763    23   66788899999999999998753    4443 55677766554  45554 456


Q ss_pred             HHhcceEEcCC---C--ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTKD---G--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~~---G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                       .+++|++.+.   +  ||+++  ++.+++.++++|.++
T Consensus       329 -~~~gi~v~~~~~~~~iRis~~--~~~~i~~~~~~l~~~  364 (369)
T 3cq5_A          329 -LDRGVLIRDVGIAGHLRTTIG--VPEENDAFLDAAAEI  364 (369)
T ss_dssp             -HHTTEECBCCSCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             -HHCCEEEEECCCCCeEEEEeC--CHHHHHHHHHHHHHH
Confidence             5789998764   3  88887  788999999999886

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=95.00  E-value=0.73  Score=46.91  Aligned_cols=83  Identities=10%  Similarity=0.231  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-CCCCceEEec--CCC-------HHHHHHHHHhCCeEEeC----CC--
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TDQIGMFCYT--GLN-------ATQVEKLIKEHSVYLTK----DG--  396 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i-~~q~GmF~~~--~l~-------~~~v~~Ll~e~~Vy~~p----~g--  396 (420)
                      .++.+.++..+.++.|.+.|++..   .++.+ .++.++++|-  +..       .+..+.|. +.|+.+.+    .|  
T Consensus       391 g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~-~~G~~~~~~~~~~g~~  466 (497)
T 2qma_A          391 ALGDMYDHLLAQTLEVADMIRTND---QFELLAEPSLSTVLFRATHETADLDELNKALRLEAL-TRGIAVLGETIVDGKT  466 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCT---TEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHH-HHTSCBCEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCC---CeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHH-hCCCEEEEeeEECCEE
Confidence            355667888899999999998752   15543 4456666653  211       12234554 55776643    22  


Q ss_pred             --cEEEc--ccCCCCHHHHHHHHHHHh
Q psy16707        397 --RISMA--GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 --Ris~a--gl~~~ni~~la~AI~~vv  419 (420)
                        ||+++  ..+.+.++++.++|.++.
T Consensus       467 ~lRis~~~~~~t~edi~~~~~~l~~~~  493 (497)
T 2qma_A          467 ALKFTILNPCLTTSDFESLLSKINMLA  493 (497)
T ss_dssp             EEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence              99885  457888999999998764

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=94.95  E-value=0.18  Score=47.98  Aligned_cols=100  Identities=19%  Similarity=0.262  Sum_probs=66.1

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceeec-----CC
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCYT-----GL   85 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~G-mFs~~-----gL   85 (420)
                      +++..+...+...|.      .+.++  ++.++++++.+|+.|.+.|++.+    +..+..   +.| |+++.     +.
T Consensus       242 ~~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  311 (366)
T 1m32_A          242 TSPTHTVLAFAQALK------ELAKEGGVAARHQRYQQNQRSLVAGMRALG----FNTLLDDELHSPIITAFYSPEDPQY  311 (366)
T ss_dssp             CCCHHHHHHHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCCCTTC
T ss_pred             CCCHHHHHHHHHHHH------HHHHccCHhHHHHHHHHHHHHHHHHHHHCC----CeeccCchhcCceEEEEEcCccCCC
Confidence            444444444444432      24444  78899999999999999998863    333332   456 44443     45


Q ss_pred             CHHHHH-HHHHhcceEEcCCC-------ceecccC-CcCCHHHHHHHHHhh
Q psy16707         86 NATQVE-KLIKEHSVYLTKDG-------RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~qv~-~L~~~~~IY~~~~G-------Rinvagl-~~~ni~~va~ai~~v  127 (420)
                      +.+++. .|. +++|++....       ||+++.. +.+++++++++|.++
T Consensus       312 ~~~~~~~~l~-~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  361 (366)
T 1m32_A          312 RFSEFYRRLK-EQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTA  361 (366)
T ss_dssp             CHHHHHHHHH-HTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHH-HCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            666654 554 5599986432       8888876 479999999999887

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=94.91  E-value=0.12  Score=49.02  Aligned_cols=103  Identities=13%  Similarity=0.101  Sum_probs=67.5

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec---CCCHHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT---GLNATQ   89 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~GmFs~~---gL~~~q   89 (420)
                      ..+++..+...+...|.      .+.++++.++++++.+|+.|.+.|++.+    +..+..  ..+++++.   |.+.++
T Consensus       228 ~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~  297 (352)
T 1iug_A          228 AWTPAINLVLAVAAVLE------EVLPRLEEHLALKAWQNALLYGVGEEGG----LRPVPKRFSPAVAAFYLPEGVPYAR  297 (352)
T ss_dssp             SSCCCHHHHHHHHHHHH------HHGGGHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSBCTTCEEEECCTTCCHHH
T ss_pred             CCCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcccccccCCeEEEEEcCCCCCHHH
Confidence            34555555444444442      2333478899999999999999998763    443333  33455543   566666


Q ss_pred             HHHHHHhcceEEcCC--------CceecccCC-cCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTKD--------GRISMAGVT-SKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~~--------GRinvagl~-~~ni~~va~ai~~v  127 (420)
                      +...-.+++|++...        =||+++..+ ..+++.++++|.++
T Consensus       298 ~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  344 (352)
T 1iug_A          298 VKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREV  344 (352)
T ss_dssp             HHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHH
Confidence            654334569998632        378887764 78999999999876

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=94.87  E-value=0.08  Score=51.58  Aligned_cols=106  Identities=12%  Similarity=0.163  Sum_probs=67.6

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-----CCH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNA   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-----L~~   87 (420)
                      ..|++++..+...+...|.+   ..+|   ++.++++++..|+.|.+.|++.- |+ |..+..+.|||.+.-     .+.
T Consensus       264 ~~~~~~~~~~~~a~~~~l~~---~~~~---~~~~~~~~~~~~~~l~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~  335 (390)
T 1d2f_A          264 DGLSSPSVLALTAHIAAYQQ---GAPW---LDALRIYLKDNLTYIADKMNAAF-PE-LNWQIPQSTYLAWLDLRPLNIDD  335 (390)
T ss_dssp             SCCCSCCHHHHHHHHHHHHH---CHHH---HHHHHHHHHHHHHHHHHHHHHHC-SS-CCCCCCSBCSEEEEECGGGCCCH
T ss_pred             cccCCCCHHHHHHHHHHHhc---CHHH---HHHHHHHHHHHHHHHHHHHHhhC-CC-CEEecCCccEEEEEEccccCCCH
Confidence            35656676666666666653   1345   56678889999999999998731 22 555555667876543     455


Q ss_pred             HHH-HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 TQV-EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv-~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +++ +.|.++++|++.+        .+  ||+++. +..+++...+.|.++
T Consensus       336 ~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~  385 (390)
T 1d2f_A          336 NALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINA  385 (390)
T ss_dssp             HHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence            544 5677688999854        23  888886 455666655555443

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=94.85  E-value=0.036  Score=53.99  Aligned_cols=100  Identities=14%  Similarity=0.156  Sum_probs=65.6

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------CH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------NA   87 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~~   87 (420)
                      .|+.++ .+...+...|.+.   .+|   ++.++++++..|+.|.+.|++.+    |..+..+.|+|.+.-+      +.
T Consensus       266 ~~~~~~-~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~~~~~~~  334 (386)
T 1u08_A          266 TFSVNT-PAQLALADMLRAE---PEH---YLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDYSAVSTLDD  334 (386)
T ss_dssp             TSSCCH-HHHHHHHHHHHHC---THH---HHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTTTCCSCH
T ss_pred             ccCCCh-HHHHHHHHHHhCC---cHH---HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCceEEEEEecCCCCCCCH
Confidence            354433 3455555555432   334   56788899999999999998752    5555567788877644      45


Q ss_pred             HHH-HHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHH
Q psy16707         88 TQV-EKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIH  125 (420)
Q Consensus        88 ~qv-~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~  125 (420)
                      +++ +.|.++++|++.+          .+  ||+++. +..+|+..+++|.
T Consensus       335 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~  384 (386)
T 1u08_A          335 VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLR  384 (386)
T ss_dssp             HHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHh
Confidence            555 4477788999853          22  788863 6667777777664

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=94.77  E-value=0.49  Score=48.31  Aligned_cols=84  Identities=8%  Similarity=0.252  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC---CCCceEEecCCC--------------------HHHHHHHHHh
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT---DQIGMFCYTGLN--------------------ATQVEKLIKE  387 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~---~q~GmF~~~~l~--------------------~~~v~~Ll~e  387 (420)
                      +.++.+.++..+.++.|.+.|++. |    ++.+.   ++.++|+|...+                    .+..+.|.++
T Consensus       382 ~g~~~~~~~~~~~a~~l~~~L~~~~~----~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  457 (504)
T 2okj_A          382 VGFENQINKCLELAEYLYAKIKNREE----FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES  457 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTT----EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC----EEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC
Confidence            345667788889999999999875 3    55453   677888763211                    2344677655


Q ss_pred             CCeEEeC----C--C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707        388 HSVYLTK----D--G--RISMAG--VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       388 ~~Vy~~p----~--g--Ris~ag--l~~~ni~~la~AI~~vv  419 (420)
                      ..+++.+    +  +  ||+++.  .+.+.|+++.++|.++.
T Consensus       458 G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~  499 (504)
T 2okj_A          458 GTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLG  499 (504)
T ss_dssp             TSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            4455542    2  1  888863  46678999999998865

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=94.72  E-value=0.16  Score=48.77  Aligned_cols=105  Identities=11%  Similarity=0.059  Sum_probs=67.2

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccceee--cCCCH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFCY--TGLNA   87 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~GmFs~--~gL~~   87 (420)
                      .+++|+..+...+...|.      .|.+.++.++++++.+|+.|.+.|++.  ++ +..+..+    .+++++  .|.+.
T Consensus       231 ~~~~~~~~~~~~~~~al~------~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~  301 (382)
T 4eb5_A          231 RSGSENVPSIVGFGKAAE------ITAMEWREEAERLRRLRDRIIDNVLKI--EE-SYLNGHPEKRLPNNVNVRFSYIEG  301 (382)
T ss_dssp             SCSCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHTTS--TT-EEECSCSSSBCTTEEEEEETTSCH
T ss_pred             cCCCccHHHHHHHHHHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhC--CC-eEEeCCcccCCCCEEEEEeCCcCH
Confidence            345555554443333332      344568889999999999999999864  22 3322221    346544  46677


Q ss_pred             HHHHHHHHhcceEEcCC-------------------------C--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         88 TQVEKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv~~L~~~~~IY~~~~-------------------------G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      +++...-.+++|++...                         +  ||+++. .+.+++++++++|.++
T Consensus       302 ~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  369 (382)
T 4eb5_A          302 ESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV  369 (382)
T ss_dssp             HHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence            76654445789988642                         2  777764 4678999999998876

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=94.43  E-value=0.06  Score=53.60  Aligned_cols=14  Identities=21%  Similarity=-0.033  Sum_probs=9.4

Q ss_pred             cCCHHHHHHHHHhh
Q psy16707        114 SKNVGYLAKAIHAN  127 (420)
Q Consensus       114 ~~ni~~va~ai~~v  127 (420)
                      ......++++|.+.
T Consensus        85 ~~~~~~l~~~la~~   98 (419)
T 2eo5_A           85 NIPQLELAKKLVTY   98 (419)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh
Confidence            34456777887776

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=94.35  E-value=0.18  Score=49.33  Aligned_cols=90  Identities=12%  Similarity=0.163  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--cccccee--e--cCCCHHHHHHHHHhcceEEcCCC---
Q psy16707         35 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFC--Y--TGLNATQVEKLIKEHSVYLTKDG---  105 (420)
Q Consensus        35 L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs--~--~gL~~~qv~~L~~~~~IY~~~~G---  105 (420)
                      +...+.++++.+++++..+|+.|.+.|++.+    |..+.  .+..++.  +  .|++.+++..+-++++|++...+   
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~  347 (417)
T 3n0l_A          272 FKFNLSDEWKVYAKQVRTNAQVLANVLMDRK----FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPG  347 (417)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTT
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC----ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCC
Confidence            4444556778899999999999999998743    33332  1122222  2  25688888888789999986332   


Q ss_pred             -----------ceeccc-----CCcCCHHHHHHHHHhhC
Q psy16707        106 -----------RISMAG-----VTSKNVGYLAKAIHANG  128 (420)
Q Consensus       106 -----------Rinvag-----l~~~ni~~va~ai~~v~  128 (420)
                                 ||+.++     ++..+|+.++++|.++-
T Consensus       348 ~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l  386 (417)
T 3n0l_A          348 EIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADIL  386 (417)
T ss_dssp             CCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence                       555544     55699999999998873

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=94.30  E-value=0.31  Score=46.01  Aligned_cols=85  Identities=14%  Similarity=0.182  Sum_probs=58.3

Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---cccceee---cCCCHHHHHHHHHhcceEEcC--------
Q psy16707         39 WLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCY---TGLNATQVEKLIKEHSVYLTK--------  103 (420)
Q Consensus        39 W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~---~gL~~~qv~~L~~~~~IY~~~--------  103 (420)
                      |.++ ++.++++++.+|+.|.+.|++.+    +..+..   ..+++++   .|.+.+++...-.+++|++..        
T Consensus       248 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~  323 (353)
T 2yrr_A          248 VLEEGVAARERRAREVYAWVLEELKARG----FRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQ  323 (353)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTT
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHCC----CccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccCCC
Confidence            4444 78899999999999999998753    333332   2334333   256666665443455999862        


Q ss_pred             CCceec-ccCCcCCHH-HHHHHHHhh
Q psy16707        104 DGRISM-AGVTSKNVG-YLAKAIHAN  127 (420)
Q Consensus       104 ~GRinv-agl~~~ni~-~va~ai~~v  127 (420)
                      .-||++ +..+..+++ +++++|.++
T Consensus       324 ~iRi~~~~~~~~~~~~~~~~~~l~~~  349 (353)
T 2yrr_A          324 VLRLGLMGEGARREAYQAFLKALDRA  349 (353)
T ss_dssp             CEEEECSGGGSCHHHHHHHHHHHHHH
T ss_pred             eEEEecCccCCHHHHHHHHHHHHHHH
Confidence            237787 457888999 999999875

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=94.25  E-value=0.23  Score=48.38  Aligned_cols=82  Identities=12%  Similarity=0.256  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc------cccceeec--CCCHHHHHHHHHhcceEEcCC----------
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD------QIGMFCYT--GLNATQVEKLIKEHSVYLTKD----------  104 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~------Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~----------  104 (420)
                      ++.++++++.+++.|.+.|++..   .+..+..      +.+||++.  +.+.+++...-++++|++...          
T Consensus       303 ~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~  379 (420)
T 1t3i_A          303 MENIHNYEVELTHYLWQGLGQIP---QLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRL  379 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCT---TEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC---CeEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccchHHHHh
Confidence            67888999999999999998752   2444433      35677664  345666665557789998654          


Q ss_pred             -C-----ceeccc-CCcCCHHHHHHHHHhh
Q psy16707        105 -G-----RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 -G-----Rinvag-l~~~ni~~va~ai~~v  127 (420)
                       |     ||+++. .+.+++++++++|.++
T Consensus       380 ~g~~~~iRis~~~~~~~~~i~~~~~~l~~~  409 (420)
T 1t3i_A          380 FDASGSARASLYFYNTKEEIDLFLQSLQAT  409 (420)
T ss_dssp             TTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence             2     777776 4778999999998876

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=94.24  E-value=0.12  Score=50.58  Aligned_cols=108  Identities=10%  Similarity=0.116  Sum_probs=67.5

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-----cccceeecCCCH
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWL-TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-----QIGMFCYTGLNA   87 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~-~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-----Q~GmFs~~gL~~   87 (420)
                      .+++|+..+...+...|.      .|. +.++.++++++.+|+.|.+.|++......|..+..     +.+|+++.--+.
T Consensus       279 ~~~~~~~~~~~a~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  352 (416)
T 1qz9_A          279 LCGTQPITSLAMVECGLD------VFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPEG  352 (416)
T ss_dssp             CCSCCCHHHHHHHHHHHH------HHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTTH
T ss_pred             cCCCCCHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCCH
Confidence            344566665544444442      121 24777889999999999999987511002333333     346666543344


Q ss_pred             HHHHHHHHhcceEEcCCC----ceecc--cCCcCCHHHHHHHHHhh
Q psy16707         88 TQVEKLIKEHSVYLTKDG----RISMA--GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv~~L~~~~~IY~~~~G----Rinva--gl~~~ni~~va~ai~~v  127 (420)
                      +++...-.+++|++...+    ||+++  ..+..++++++++|.++
T Consensus       353 ~~l~~~l~~~gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~  398 (416)
T 1qz9_A          353 YAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEI  398 (416)
T ss_dssp             HHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHH
Confidence            555433346799875322    88887  58899999999999887

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=94.16  E-value=0.18  Score=48.37  Aligned_cols=85  Identities=9%  Similarity=0.209  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecCCCHHHH-HHHHHhcceEEcCCC-----ceeccc
Q psy16707         39 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTGLNATQV-EKLIKEHSVYLTKDG-----RISMAG  111 (420)
Q Consensus        39 W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~gL~~~qv-~~L~~~~~IY~~~~G-----Rinvag  111 (420)
                      ....++.+.+++..+|+.|.+.|++.+    +..+. .+.+++++.....+++ +.|. +++|++...+     ||+++.
T Consensus       303 ~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~Ri~~~~  377 (397)
T 3f9t_A          303 GREGQRKIVNECMENTLYLYKKLKENN----FKPVIEPILNIVAIEDEDYKEVCKKLR-DRGIYVSVCNCVKALRIVVMP  377 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEEEEECTTHHHHHHHHH-HTTCBCEECSSSSEEEEECCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHCC----CEEEcCCCccEEEEEeCCHHHHHHHHH-hCCeEEeccCCCCEEEEEEcC
Confidence            345567788889999999999999873    23222 4566666655554554 4554 5599987665     888874


Q ss_pred             -CCcCCHHHHHHHHHhhC
Q psy16707        112 -VTSKNVGYLAKAIHANG  128 (420)
Q Consensus       112 -l~~~ni~~va~ai~~v~  128 (420)
                       .+..+++.++++|.++-
T Consensus       378 ~~~~e~i~~~~~~l~~~l  395 (397)
T 3f9t_A          378 HIKREHIDNFIEILNSIK  395 (397)
T ss_dssp             TCCHHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhh
Confidence             57799999999998763

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=94.13  E-value=0.28  Score=46.98  Aligned_cols=102  Identities=15%  Similarity=0.157  Sum_probs=65.7

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccce---eecCCCHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMF---CYTGLNATQ   89 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~GmF---s~~gL~~~q   89 (420)
                      +|+..+...+...|.     ......++.++++++.+|+.|.+.|++.+    +..+..+    .|.|   .+.+.+.++
T Consensus       243 ~~~~~~~~a~~~al~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (384)
T 3zrp_A          243 TPPVHVILQLAEAFR-----LIEKEGIENRIKRHTMVASAIRAGLEALG----LEIVARRPESYSNTVTGVILKVADPQK  313 (384)
T ss_dssp             CCCHHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSCSSGGGBCSSEEEEECSSSCHHH
T ss_pred             CCCHHHHHHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHCC----CeEccCcccccCccEEEEECCCCCHHH
Confidence            666655544443332     11112378999999999999999998873    3333333    3433   233556666


Q ss_pred             HHHHHHhcceEEcCCC-------ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTKDG-------RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~~G-------Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      +...-.+++|++....       ||++.. .+..++++++++|.++
T Consensus       314 ~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~  359 (384)
T 3zrp_A          314 VLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERT  359 (384)
T ss_dssp             HHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHH
Confidence            5443345599887655       788665 4568899999999887

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=94.02  E-value=0.08  Score=53.07  Aligned_cols=88  Identities=20%  Similarity=0.255  Sum_probs=59.9

Q ss_pred             CCchHHHHHHHHHHHccCCCCCCCCCCC--CHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeec
Q psy16707        177 PYVLPSVKQADEIVLNKNLDKEYAPIIG--APDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQG  254 (420)
Q Consensus       177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G--~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt  254 (420)
                      ++.++.+.++..........+.|....+  ..+|++++++++ |..      .   .                    +.+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-g~~------~---~--------------------v~~   79 (421)
T 2ctz_A           30 SYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALE-GGK------A---A--------------------LAT   79 (421)
T ss_dssp             CBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHH-TCS------E---E--------------------EEE
T ss_pred             eeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHh-CCC------c---e--------------------EEe
Confidence            4566777777655432223567775543  478999999876 322      1   1                    446


Q ss_pred             ccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCc
Q psy16707        255 ISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGL  297 (420)
Q Consensus       255 ~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~  297 (420)
                      .+||.|+..++..+  +.| ||.|++++|+|+.+...+    +..|+
T Consensus        80 ~sGt~A~~~~l~~~--~~~-gd~vi~~~~~~~~~~~~~~~~~~~~g~  123 (421)
T 2ctz_A           80 ASGHAAQFLALTTL--AQA-GDNIVSTPNLYGGTFNQFKVTLKRLGI  123 (421)
T ss_dssp             SSHHHHHHHHHHHH--CCT-TCEEEECSCCCHHHHHHHHTHHHHTTC
T ss_pred             cCHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence            67799999888755  457 999999999999877665    44554

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=93.99  E-value=0.04  Score=55.72  Aligned_cols=82  Identities=16%  Similarity=0.256  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707        336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----RISMA-GV  403 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl  403 (420)
                      .+.++++++++.+.+.|+++  +.+..+.. ....|+|+++.++     .+.++.|+ ++||++.|+|    ||+++ ..
T Consensus       352 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g~~~iRi~~~~~~  429 (449)
T 2cjg_A          352 GLFERAVQHGKYLRARLDELAADFPAVVLD-PRGRGLMCAFSLPTTADRDELIRQLW-QRAVIVLPAGADTVRFRPPLTV  429 (449)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHSTTTSEE-EEEETTEEEEECSSHHHHHHHHHHHH-HTTEECEEETTTEEEECCCTTC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceee-EeeccEEEEEEECChHHHHHHHHHHH-HCCeEEecCCCCEEEEECCCCC
Confidence            45578888888888888875  22210112 2345767665443     24557776 6899999865    88654 36


Q ss_pred             CCCCHHHHHHHHHHHh
Q psy16707        404 TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv  419 (420)
                      +.++|+.+.++|.+++
T Consensus       430 t~e~i~~~l~~l~~~l  445 (449)
T 2cjg_A          430 STAEIDAAIAAVRSAL  445 (449)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            8889999999998875

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=93.97  E-value=0.071  Score=53.40  Aligned_cols=73  Identities=19%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHhcCCCCCCcccCCCCceEEecC-------CC------HHHHHHHHHhCCeEEeC------------C--
Q psy16707        343 SMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-------LN------ATQVEKLIKEHSVYLTK------------D--  395 (420)
Q Consensus       343 ~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~-------l~------~~~v~~Ll~e~~Vy~~p------------~--  395 (420)
                      ++++.+.+.|++.|    +..+.++.|+|.|..       ++      .+.+++|++++||++.|            +  
T Consensus       330 ~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~  405 (467)
T 1ax4_A          330 GQVKYLGDRLREAG----IPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQ  405 (467)
T ss_dssp             HHHHHHHHHHHHTT----CCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSB
T ss_pred             HHHHHHHHHHHhCC----CCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccc
Confidence            55677888888755    555567788888765       32      24557776899999976            2  


Q ss_pred             -----C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707        396 -----G--RISMAG--VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----g--Ris~ag--l~~~ni~~la~AI~~vv  419 (420)
                           +  ||+++.  ++.+.+++++++|.+++
T Consensus       406 ~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~  438 (467)
T 1ax4_A          406 KHADMEFMRLTIARRVYTNDHMDYIADALIGLK  438 (467)
T ss_dssp             CCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred             cccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence                 3  888872  67788999999998764

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=93.94  E-value=0.12  Score=49.36  Aligned_cols=99  Identities=16%  Similarity=0.194  Sum_probs=69.9

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHH-HHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NAT-QVE   91 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~-qv~   91 (420)
                      .+++..+...+...|.+.    +   .++.++++++..|+.|.+.|++..   .+.++....|+|.+..+   +.+ -++
T Consensus       245 ~~~~~~~~~~~~~~l~~~----~---~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~  314 (361)
T 3ftb_A          245 WNINCFAEMAAINCLKDT----N---YIEESLLWIKKERKRFIEELNKIG---FIKRVFSPHANFVLCRLENISGEKLYD  314 (361)
T ss_dssp             TCSCHHHHHHHHHTSSCH----H---HHHHHHHHHHHHHHHHHHHHHHSS---SEEEEECCSSSEEEEEESSSCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCH----H---HHHHHHHHHHHHHHHHHHHHHhCC---CCceecCCCCeEEEEEcCCCCHHHHHH
Confidence            367778888888888862    3   466778899999999999998752   24434556677765544   344 456


Q ss_pred             HHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         92 KLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        92 ~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .|.++ +|++.+        .|  ||+++  ++.+++.+.+++..+
T Consensus       315 ~l~~~-gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~  357 (361)
T 3ftb_A          315 SLLKE-DIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGV  357 (361)
T ss_dssp             HHHTT-TEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             HHHHC-CeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence            67655 999864        24  66665  677889999998875

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=93.91  E-value=0.062  Score=52.84  Aligned_cols=103  Identities=8%  Similarity=0.071  Sum_probs=68.5

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC-C----CH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-L----NA   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g-L----~~   87 (420)
                      ..|+++|..+...+...|.+.        +++.++++++..|+.|.+.|++.+    |.....+.|+|.+.- +    +.
T Consensus       272 ~~~~~~~~~~~~a~~~~l~~~--------~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~  339 (400)
T 3asa_A          272 TTFNGASIPAQEAGVAGLSIL--------PQLEAIHYYRENSDLLRKALLATG----FEVFGGEHAPYLWVKPTQANISD  339 (400)
T ss_dssp             HHCCCCCHHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHHHHHHTT----CEEEECSSSSEEEEECCCTTCCT
T ss_pred             cCccCCChHHHHHHHHHhCcH--------HHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCceEEEEeccCCCCCH
Confidence            446667777777777777542        466788899999999999998763    444444567876654 3    23


Q ss_pred             -HHHHHHHHhcceEEcC--------CCceecc-cCCcCCHHHHHHHHHhh
Q psy16707         88 -TQVEKLIKEHSVYLTK--------DGRISMA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 -~qv~~L~~~~~IY~~~--------~GRinva-gl~~~ni~~va~ai~~v  127 (420)
                       +-++.|.++++|++.+        .+.|-|+ ..+..+++...++|.++
T Consensus       340 ~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~  389 (400)
T 3asa_A          340 RDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMA  389 (400)
T ss_dssp             TTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHH
Confidence             4566788888998863        3434343 34667788777777665

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=93.90  E-value=0.48  Score=49.23  Aligned_cols=89  Identities=17%  Similarity=0.291  Sum_probs=64.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---CCCCceEEe----cCCCHHHHHHHHHhCCeEEeC----
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCY----TGLNATQVEKLIKEHSVYLTK----  394 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i---~~q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p----  394 (420)
                      +++.+..+.+.+.+.+.+.-++|.+.|.+.|.    ..+   +... ++.+    .|++-..++.++++.||-+-+    
T Consensus       325 f~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~----~vvsGgTdnH-lvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP  399 (490)
T 3ou5_A          325 LKQACTPMFREYSLQVLKNARAMADALLERGY----SLVSGGTDNH-LVLVDLRPKGLDGARAERVLELVSITANKNTCP  399 (490)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC----EEGGGSCSSS-EEEEECGGGTCCHHHHHHHHHHTTEECEEECCT
T ss_pred             HHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCC----eeecCCCCce-EEEEeccccCCCHHHHHHHHHHcCcEECCCCCC
Confidence            44555667778888888888999999999984    333   2221 3332    367788899999999998843    


Q ss_pred             --------CC-cEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707        395 --------DG-RISMAG-----VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 --------~g-Ris~ag-----l~~~ni~~la~AI~~vv  419 (420)
                              +| ||.-..     +.++.++.+|+-|++++
T Consensus       400 ~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l  438 (490)
T 3ou5_A          400 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV  438 (490)
T ss_dssp             TCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence                    23 887664     45677899999998875

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=93.79  E-value=0.049  Score=52.29  Aligned_cols=100  Identities=13%  Similarity=0.109  Sum_probs=67.2

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CH-HHH
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NA-TQV   90 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~-~qv   90 (420)
                      ..+++..+..++...|.+.+   .|.++++.+.    ..|+.|.+.|++.  + .+.. ....|+|.+.-+   +. +-+
T Consensus       225 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~----~~~~~l~~~L~~~--~-~~~~-~~~~~~~~~~~~~~~~~~~l~  293 (350)
T 3fkd_A          225 PWAVNALAIEAAKFILIHPA---QFTLPIRKWQ----RNTVDFITALNRL--D-GVEV-HPSGTTFFLLRLKKGTAAELK  293 (350)
T ss_dssp             TTCSCHHHHHHHHHHHHCTT---TTCCCHHHHH----HHHHHHHHHHHHS--T-TEEE-CCCSSSEEEEEESSSCHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCHH---HHHHHHHHHH----HHHHHHHHHHhcC--C-CcEE-CCCCCcEEEEECCCCCHHHHH
Confidence            34677778888888887754   4555554443    6688888888775  2 2333 345677765444   33 446


Q ss_pred             HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         91 EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        91 ~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +.|.++++|++.+        .+  ||+++  ++.+++.+.+++.++
T Consensus       294 ~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~  338 (350)
T 3fkd_A          294 KYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETF  338 (350)
T ss_dssp             HHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHH
Confidence            6787779999864        23  77765  667899999999887

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=93.69  E-value=0.49  Score=45.76  Aligned_cols=101  Identities=18%  Similarity=0.249  Sum_probs=63.6

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceee---cCCCHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY---TGLNAT   88 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----GmFs~---~gL~~~   88 (420)
                      +++..+...+...|.     . +.+ .++.++++++.+|+.|.+.|++.+    |..+..+.    +++++   .|.+.+
T Consensus       272 ~~~~~~~~a~~~al~-----~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (393)
T 1vjo_A          272 TAPINLYYALREALR-----L-IAQEGLANCWQRHQKNVEYLWERLEDIG----LSLHVEKEYRLPTLTTVCIPDGVDGK  341 (393)
T ss_dssp             CCCHHHHHHHHHHHH-----H-HHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBSSCGGGBCSSEEEEECCTTCCHH
T ss_pred             CCCHHHHHHHHHHHH-----H-HHHccHHHHHHHHHHHHHHHHHHHHHcC----CcccCCccccCCcEEEEEcCCCCCHH
Confidence            555555554444443     1 223 378889999999999999998863    33333221    23332   256666


Q ss_pred             HH-HHHHHhcceEEcC------CC--ceecccCC--cCCHHHHHHHHHhh
Q psy16707         89 QV-EKLIKEHSVYLTK------DG--RISMAGVT--SKNVGYLAKAIHAN  127 (420)
Q Consensus        89 qv-~~L~~~~~IY~~~------~G--Rinvagl~--~~ni~~va~ai~~v  127 (420)
                      ++ +.|.++++|++.+      .+  ||++.+++  ..+++.++++|.++
T Consensus       342 ~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~  391 (393)
T 1vjo_A          342 AVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQV  391 (393)
T ss_dssp             HHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHH
Confidence            55 5677777999853      23  66754543  34699999998875

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=93.66  E-value=0.25  Score=47.38  Aligned_cols=102  Identities=20%  Similarity=0.308  Sum_probs=66.5

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----ccc--eeecCCCHHH
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGM--FCYTGLNATQ   89 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~Gm--Fs~~gL~~~q   89 (420)
                      .+++..+...+...|.+      |.+.++.++++++..|+.|.+.|++.+    +..+...    .++  |.+.+.+.++
T Consensus       237 ~~~~~~~~~a~~~al~~------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (384)
T 1eg5_A          237 GTQNVPGIVGAARAMEI------AVEELSEAAKHMEKLRSKLVSGLMNLG----AHIITPLEISLPNTLSVSFPNIRGST  306 (384)
T ss_dssp             SCCCHHHHHHHHHHHHH------HHHTHHHHHHHHHHHHHHHHHHHHTTT----CEECSCTTSBCTTEEEEECTTCCHHH
T ss_pred             CCCChHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHhCCCC----eEEeCCcccCCCCEEEEEeCCCCHHH
Confidence            35555555555544432      445688899999999999999998732    3333321    123  3334667766


Q ss_pred             HHHHHHhcceEEcCC-------------------------C--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTKD-------------------------G--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~~-------------------------G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      +...-.+++|++...                         +  ||+++. .+..++++++++|.++
T Consensus       307 ~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  372 (384)
T 1eg5_A          307 LQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI  372 (384)
T ss_dssp             HHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence            654446789998752                         2  777664 6788999999998876

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=93.51  E-value=0.21  Score=50.06  Aligned_cols=103  Identities=19%  Similarity=0.304  Sum_probs=69.7

Q ss_pred             ccCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccC----CCCce---EEe
Q psy16707        305 FYSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKE-GSNKPWNHIT----DQIGM---FCY  373 (420)
Q Consensus       305 ~~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~----~q~Gm---F~~  373 (420)
                      .+.+||..+.......|       +|. ++  ++.+.+|.++.++.+++.|+++ |.    ...+    .+.++   |..
T Consensus       246 ~~~Tp~v~~i~~l~~al-------~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~----~~~~~~~~~rs~~ivsf~~  314 (377)
T 3e77_A          246 LYNTPPCFSIYVMGLVL-------EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGF----YVCPVEPQNRSKMNIPFRI  314 (377)
T ss_dssp             CSSCCCHHHHHHHHHHH-------HHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTS----EECCSCGGGBCSSEEEEEE
T ss_pred             CCCCchHHHHHHHHHHH-------HHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCc----eecCCCHHHcCCcEEEEEc
Confidence            46788887776555433       243 33  6888899999999999999987 42    2111    23444   333


Q ss_pred             cCCC------HHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        374 TGLN------ATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       374 ~~l~------~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                      -+.+      .++++.| +++||++.+|    |  |+|+..- +.++|+.+.++|++++
T Consensus       315 ~~~~~~~~~~~~~l~~l-~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~  372 (377)
T 3e77_A          315 GNAKGDDALEKRFLDKA-LELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFL  372 (377)
T ss_dssp             SSTTCCHHHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHH-HHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            3432      2344555 4789999775    3  9999865 6788999999999875

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=93.41  E-value=0.21  Score=49.74  Aligned_cols=105  Identities=14%  Similarity=0.281  Sum_probs=69.2

Q ss_pred             hccCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccc-C--CC-CceEEe--
Q psy16707        304 AFYSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKEGSNKPW-NHI-T--DQ-IGMFCY--  373 (420)
Q Consensus       304 ~~~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w-~~i-~--~q-~GmF~~--  373 (420)
                      ..+.+||.++.......|       +|. ++  ++.+.+|.++.++.+++.|++++.   + ... .  .+ .+..++  
T Consensus       233 ~~~~Tp~v~~i~~l~~al-------~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g---~~~~~~~~~~rs~~ivsf~~  302 (361)
T 3m5u_A          233 SLFNTPPTFAIYMFNLEM-------DWLLNQGGLDKVHEKNSQKATMLYECIDLSNG---FYKGHADKKDRSLMNVSFNI  302 (361)
T ss_dssp             TCSSCCCHHHHHHHHHHH-------HHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTT---SEEESSCGGGBCSSEEEEEE
T ss_pred             CCCCCccHHHHHHHHHHH-------HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC---eeeccCCHHHcCCeEEEEEC
Confidence            345678877776554433       232 33  677789999999999999998761   2 111 1  12 234443  


Q ss_pred             cC---CCHHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        374 TG---LNATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       374 ~~---l~~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                      -+   ++++.+.. ++++||++.+|    |  |||+.+- +.++|+++.++|+++.
T Consensus       303 ~~~~~~~~~~~~~-L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~  357 (361)
T 3m5u_A          303 AKNKDLEPLFVKE-AEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQ  357 (361)
T ss_dssp             SSCTTHHHHHHHH-HHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCchhhhHHHHHH-HHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHH
Confidence            22   33444544 47889999775    3  9998865 6788999999998865

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=93.37  E-value=0.25  Score=47.48  Aligned_cols=81  Identities=17%  Similarity=0.266  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--ccccceeec--CCCHHHH-HHHHHhcceEEcCCC--------ceec
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCYT--GLNATQV-EKLIKEHSVYLTKDG--------RISM  109 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~Q~GmFs~~--gL~~~qv-~~L~~~~~IY~~~~G--------Rinv  109 (420)
                      ++.+++++..+|+.|.+.|++.+    +....  ...++|.+.  |.+.+++ +.|.++++|.+.+..        ||++
T Consensus       276 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~  351 (376)
T 3f0h_A          276 ADAEVARIASQAADFRAKIKDLP----FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH  351 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSS----EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence            78899999999999999998764    22222  234555554  6666654 678888899885432        7777


Q ss_pred             c-cCCcCCHHHHHHHHHhh
Q psy16707        110 A-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       110 a-gl~~~ni~~va~ai~~v  127 (420)
                      . ..+..+++.++++|.++
T Consensus       352 ~~~~t~e~i~~~~~~l~~~  370 (376)
T 3f0h_A          352 IGALTHEDNTTLVNAFKDL  370 (376)
T ss_dssp             CSSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH
Confidence            5 46889999999999886

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=93.14  E-value=0.47  Score=46.10  Aligned_cols=103  Identities=16%  Similarity=0.234  Sum_probs=65.8

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc---cc-ceeec---CCC
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ---IG-MFCYT---GLN   86 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q---~G-mFs~~---gL~   86 (420)
                      +.+++..+..-+...|      +.+.++ ++.++++++.+|+.|.+.|++.+    +..+..+   .| ++++.   +.+
T Consensus       265 ~~~~~~~~~~a~~~al------~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~  334 (416)
T 3isl_A          265 HHTEATTMLYALREGV------RLVLEEGLETRFERHRHHEAALAAGIKAMG----LRLFGDDSCKMPVVTCVEIPGGID  334 (416)
T ss_dssp             SSCCCHHHHHHHHHHH------HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCBCSCGGGBCTTEEEEECCTTCC
T ss_pred             CCCCCHHHHHHHHHHH------HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC----CEeccCccccCCcEEEEeCCCCCC
Confidence            4456655544443333      223344 88999999999999999998853    3333322   23 33332   556


Q ss_pred             HHH-HHHHHHhcceEEcC------CC--ceeccc-CCcCC-HHHHHHHHHhh
Q psy16707         87 ATQ-VEKLIKEHSVYLTK------DG--RISMAG-VTSKN-VGYLAKAIHAN  127 (420)
Q Consensus        87 ~~q-v~~L~~~~~IY~~~------~G--Rinvag-l~~~n-i~~va~ai~~v  127 (420)
                      .++ ++.|.++++|++..      .+  ||++.+ .++.+ +++++++|.++
T Consensus       335 ~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~  386 (416)
T 3isl_A          335 GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAV  386 (416)
T ss_dssp             HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHH
Confidence            655 45687888999863      22  778755 45556 99999998876

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=93.11  E-value=0.99  Score=46.37  Aligned_cols=37  Identities=16%  Similarity=0.255  Sum_probs=29.3

Q ss_pred             HHHHHhCCeEEeCCCcEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        382 EKLIKEHSVYLTKDGRISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       382 ~~Ll~e~~Vy~~p~gRis~ag-l~~~ni~~la~AI~~vv  419 (420)
                      ..| .+.|||+.|.+++.++- +++++||.+.+++++++
T Consensus       406 ~~l-l~~Gv~~~p~~~~~~s~~~T~~dId~~l~al~~~l  443 (454)
T 4ao9_A          406 FHL-LNEDIYSSPRGFVVLSLPLTDADIDRYVAAIGSFI  443 (454)
T ss_dssp             HHH-HHTTEECCTTCEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHH-HHCCEEEcCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence            445 47799999999765432 68899999999999886

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=93.11  E-value=0.092  Score=53.66  Aligned_cols=82  Identities=11%  Similarity=0.099  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhc--CCCCCCcccCCCCceEEecCCC-----HHHHHHHHHhCCeEEeCCC----cEEEc-cc
Q psy16707        336 GMADRIISMRQSLKDNLQKE--GSNKPWNHITDQIGMFCYTGLN-----ATQVEKLIKEHSVYLTKDG----RISMA-GV  403 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~--g~~~~w~~i~~q~GmF~~~~l~-----~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl  403 (420)
                      .+.++++++++.|.+.|+++  +.|..+..+ ...|+|+++.+.     .++++.|+ ++||++.|+|    ||+++ ..
T Consensus       375 ~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~~iRi~~~~~~  452 (472)
T 1ohv_A          375 DLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGRGTFCSFDTPDESIRNKLISIAR-NKGVMLGGCGDKSIRFRPTLVF  452 (472)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEETTEEEEECSSHHHHHHHHHHHH-HTTEECEEETTTEEEECCCTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCCceEEEEEeCChhHHHHHHHHHH-HCCeEEecCCCCEEEEECCCCC
Confidence            45678888888888888775  322112222 234666665442     24556775 6899999864    78665 46


Q ss_pred             CCCCHHHHHHHHHHHh
Q psy16707        404 TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       404 ~~~ni~~la~AI~~vv  419 (420)
                      ++++|+.+.++|.+++
T Consensus       453 t~e~i~~~~~~l~~~l  468 (472)
T 1ohv_A          453 RDHHAHLFLNIFSDIL  468 (472)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            7889999999998875

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=93.09  E-value=0.11  Score=49.49  Aligned_cols=81  Identities=12%  Similarity=0.110  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHhcceEEcC-----CC--ceecc-cCCc
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTK-----DG--RISMA-GVTS  114 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~~~IY~~~-----~G--Rinva-gl~~  114 (420)
                      ++.++++++.+|+.|.+.|+..    .|..+..+.|+|.+..++.+-+++|.++|+|++..     .+  ||+++ ..+.
T Consensus       266 ~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~  341 (359)
T 1svv_A          266 FFELGAHSNKMAAILKAGLEAC----GIRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEE  341 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT----TCCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHhccC----CeEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCH
Confidence            3567888888999999988422    35555567788888888888888998888998743     12  66654 4678


Q ss_pred             CCHHHHHHHHHhh
Q psy16707        115 KNVGYLAKAIHAN  127 (420)
Q Consensus       115 ~ni~~va~ai~~v  127 (420)
                      ++++.++++|.++
T Consensus       342 ~~i~~~~~~l~~~  354 (359)
T 1svv_A          342 KECHRFVEVLKRL  354 (359)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999876

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=92.95  E-value=0.29  Score=47.28  Aligned_cols=83  Identities=13%  Similarity=0.194  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccceeec--CCCHHHHHHHHHhcceEEcCC-------------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCYT--GLNATQVEKLIKEHSVYLTKD-------------  104 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~-------------  104 (420)
                      .++.++++++.+|+.|.+.|++.  + .+..+..  +.|||++.  +.+.+++...-.+++|++.+.             
T Consensus       298 ~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~  374 (406)
T 1kmj_A          298 GLNNIAEYEQNLMHYALSQLESV--P-DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNV  374 (406)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTS--T-TEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcC--C-CeEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCC
Confidence            36678889999999999999875  2 2554554  66777664  456666665557779987531             


Q ss_pred             -C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707        105 -G--RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 -G--Rinvagl-~~~ni~~va~ai~~v  127 (420)
                       +  ||+++.. +..++++++++|.++
T Consensus       375 ~~~iRis~~~~~t~~~i~~~~~~l~~~  401 (406)
T 1kmj_A          375 PAMCRASLAMYNTHEEVDRLVTGLQRI  401 (406)
T ss_dssp             SCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence             2  7787765 778999999998875

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=92.83  E-value=0.082  Score=53.75  Aligned_cols=44  Identities=14%  Similarity=0.161  Sum_probs=34.8

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH----HHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP----ICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~----i~~~aG~~  298 (420)
                      +.+.+|+.|+.+++..+  +.| ||.|++++|+|+.+..    .++..|++
T Consensus       101 v~~~sG~~Ai~~al~al--~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~  148 (430)
T 3ri6_A          101 LALGSGMAAISTAILTL--ARA-GDSVVTTDRLFGHTLSLFQKTLPSFGIE  148 (430)
T ss_dssp             EEESCHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred             EEECCHHHHHHHHHHHH--hCC-CCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence            55778999998887644  557 9999999999998887    55566765

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=92.81  E-value=0.38  Score=48.17  Aligned_cols=107  Identities=17%  Similarity=0.207  Sum_probs=71.0

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CCCCCccccccccc---eeecCC
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTE---VKGMADRIISMRQSLKDNLQKEG-SNKPWNHITDQIGM---FCYTGL   85 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e---l~~m~~Ri~~~R~~l~~~L~~~~-~~~~w~~i~~Q~Gm---Fs~~gL   85 (420)
                      ..|-+||..|..-...-|.       |..+   ++.+.+|.+.+++.|++.|++.. ..-.-..-..+.++   |.+-|.
T Consensus       245 ~~~~Tp~v~~i~~l~~al~-------~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~  317 (377)
T 3e77_A          245 SLYNTPPCFSIYVMGLVLE-------WIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNA  317 (377)
T ss_dssp             TCSSCCCHHHHHHHHHHHH-------HHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESST
T ss_pred             CCCCCchHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCC
Confidence            3577899888766655443       5543   78999999999999999998762 11000011234566   666676


Q ss_pred             CH-H-----HHHHHHHhcceEEcCC------CceecccC-CcCCHHHHHHHHHhh
Q psy16707         86 NA-T-----QVEKLIKEHSVYLTKD------GRISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~-~-----qv~~L~~~~~IY~~~~------GRinvagl-~~~ni~~va~ai~~v  127 (420)
                      .+ +     -++.|. +++|++.+.      =||++.+- +..+||+++++|.++
T Consensus       318 ~~~~~~~~~~l~~l~-~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~  371 (377)
T 3e77_A          318 KGDDALEKRFLDKAL-ELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKF  371 (377)
T ss_dssp             TCCHHHHHHHHHHHH-HTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHH-HCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            54 2     234443 679887532      27887775 568999999999876

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=92.80  E-value=0.23  Score=49.87  Aligned_cols=106  Identities=14%  Similarity=0.164  Sum_probs=65.5

Q ss_pred             cCCCchHHHHHHHHHhCChhhHHHHH-HH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCC-ceEEe--c--CCC
Q psy16707        306 YSSPPIHGARIVQEILGDPKLKAQWL-TE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCY--T--GLN  377 (420)
Q Consensus       306 ~s~pp~~ga~iv~~IL~dp~L~~~w~-~e--l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~-GmF~~--~--~l~  377 (420)
                      +.+||..+.......|       +|. ++  ++.+.+|.++.++.+++.|+++|.-.....-.... +..++  -  +++
T Consensus       262 ~gTp~v~~i~~l~~Al-------~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~  334 (386)
T 3qm2_A          262 FNTPPTFAWYLSGLVF-------KWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD  334 (386)
T ss_dssp             ----CCSHHHHHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH
T ss_pred             CCCCcHHHHHHHHHHH-------HHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc
Confidence            3467766665444323       232 33  67888999999999999999886311110011122 33333  2  244


Q ss_pred             HHHHHHHHHhCCeEEeCC----C--cEEEccc-CCCCHHHHHHHHHHHh
Q psy16707        378 ATQVEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 ~~~v~~Ll~e~~Vy~~p~----g--Ris~agl-~~~ni~~la~AI~~vv  419 (420)
                      ++++..| +++||.+.+|    |  |||+..- +.++|+++.++|+++.
T Consensus       335 ~~~~~~L-~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~  382 (386)
T 3qm2_A          335 KVFLEES-FAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFE  382 (386)
T ss_dssp             HHHHHHH-HHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence            5556665 7889998765    2  9998765 6788999999999875

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=92.68  E-value=0.29  Score=47.36  Aligned_cols=81  Identities=15%  Similarity=0.258  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC-----CHHHHHHHHHhcceEEc-------CCC---
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVEKLIKEHSVYLT-------KDG---  105 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL-----~~~qv~~L~~~~~IY~~-------~~G---  105 (420)
                      +.++.++++++..|+.|.+.|++.+    |..+..+.+|+++ -+     ..+-++.|.+ ++|++.       +.|   
T Consensus       295 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~  368 (399)
T 3tqx_A          295 TEGPQLRKQLQENSRYFRAGMEKLG----FQLVPGNHPIIPV-MLGDAQLATNMADHLLQ-EGIYVVGFSYPVVPMGKAR  368 (399)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSSEEEE-EEECHHHHHHHHHHHHH-TTEECCEECTTTSCTTCEE
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHcC----CCcCCCCCCEEEE-EeCCHHHHHHHHHHHHH-CCCEEeeeCCCCCCCCCce
Confidence            5578899999999999999999874    4444444444444 22     2344566765 699987       333   


Q ss_pred             -ceecc-cCCcCCHHHHHHHHHhh
Q psy16707        106 -RISMA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 -Rinva-gl~~~ni~~va~ai~~v  127 (420)
                       ||+++ ..+..+++.++++|.++
T Consensus       369 iRi~~~~~~~~~~i~~~~~~l~~~  392 (399)
T 3tqx_A          369 IRVQMSAVHTQQQLDRAIEAFGQV  392 (399)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCHHHHHHHHHHHHHH
Confidence             88887 67889999999998876

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=92.45  E-value=0.075  Score=53.16  Aligned_cols=77  Identities=14%  Similarity=0.160  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------C-HHH-----HHHHHHhCCeEEeC-C---------
Q psy16707        339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------N-ATQ-----VEKLIKEHSVYLTK-D---------  395 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~-~~~-----v~~Ll~e~~Vy~~p-~---------  395 (420)
                      ++..+..+.+.+.|++.|    +..+.+..|+|.|..+       + .++     +++|++++||.+.+ +         
T Consensus       316 ~~~~~~~~~l~~~L~~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~  391 (456)
T 2ez2_A          316 EHRVKQVRYLGDKLKAAG----VPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNV  391 (456)
T ss_dssp             HHHHHHHHHHHHHHHHTT----CCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTT
T ss_pred             HHHHHHHHHHHHHHhcCC----CccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCcc
Confidence            444555667777887766    4555667788887432       2 234     56666888998643 1         


Q ss_pred             ---------C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707        396 ---------G--RISMAG--VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ---------g--Ris~ag--l~~~ni~~la~AI~~vv  419 (420)
                               +  ||+++.  .+.+++++++++|.+++
T Consensus       392 ~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l  428 (456)
T 2ez2_A          392 TGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLY  428 (456)
T ss_dssp             TCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence                     2  888875  68889999999998764

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=92.36  E-value=0.21  Score=48.71  Aligned_cols=84  Identities=13%  Similarity=0.212  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-ccc-ceee----cCCCHHHHHHHHHhcceEEcCC---------
Q psy16707         40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIG-MFCY----TGLNATQVEKLIKEHSVYLTKD---------  104 (420)
Q Consensus        40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~G-mFs~----~gL~~~qv~~L~~~~~IY~~~~---------  104 (420)
                      .++++.+++++..+++.|.+.|++.+    |..+.. ..+ ++..    .+++.+++..+-++++|++.+.         
T Consensus       284 ~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~  359 (420)
T 3gbx_A          284 EPEFKVYQQQVAKNAKAMVEVFLNRG----YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSP  359 (420)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCT
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhcC----CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCcccc
Confidence            45567888899999999999998743    444432 223 3332    2567888877668889998761         


Q ss_pred             -----Cceeccc-----CCcCCHHHHHHHHHhh
Q psy16707        105 -----GRISMAG-----VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 -----GRinvag-----l~~~ni~~va~ai~~v  127 (420)
                           =||+++.     +++..++.++++|.++
T Consensus       360 ~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~  392 (420)
T 3gbx_A          360 FVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDV  392 (420)
T ss_dssp             TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCcceEEecchhcccCCCHHHHHHHHHHHHHH
Confidence                 3666654     4568899999998887

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=92.15  E-value=0.65  Score=45.21  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC---CCHHHH-HHHHHhcceEEc-------CCC----ce
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG---LNATQV-EKLIKEHSVYLT-------KDG----RI  107 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g---L~~~qv-~~L~~~~~IY~~-------~~G----Ri  107 (420)
                      ++.++++++..|..|.+.|++.+    |..+..+.|++++.-   .+.+++ +.|.++++|++.       +.|    ||
T Consensus       300 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRi  375 (401)
T 2bwn_A          300 GQKLRDAQQMHAKVLKMRLKALG----MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRF  375 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCC----CcccCCCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEE
Confidence            47788899999999999998763    344444556666642   223344 467668899984       223    78


Q ss_pred             eccc-CCcCCHHHHHHHHHhh
Q psy16707        108 SMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       108 nvag-l~~~ni~~va~ai~~v  127 (420)
                      +++. .+.++++.++++|.++
T Consensus       376 s~~~~~t~~~i~~~~~~l~~~  396 (401)
T 2bwn_A          376 TPSPVHDLKQIDGLVHAMDLL  396 (401)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHH
T ss_pred             EeeCCCCHHHHHHHHHHHHHH
Confidence            8874 4678999999999887

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=91.36  E-value=0.027  Score=55.23  Aligned_cols=103  Identities=13%  Similarity=0.120  Sum_probs=66.5

Q ss_pred             CCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC-----HH-H
Q psy16707         16 SSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----AT-Q   89 (420)
Q Consensus        16 S~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~-----~~-q   89 (420)
                      ++++..+...+...|.+.   ..|   ++.++++++..|+.|.+.|++.- + .|..+..+.|||.+.-+.     .+ -
T Consensus       271 ~~~~~~~~~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~l~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~l  342 (392)
T 3b1d_A          271 HEVSSLGYIATETAYRYG---KPW---LVALKAVLEENIQFAVEYFAQEA-P-RLKVMKPQGTYLIWLDFSDYGLTDDAL  342 (392)
Confidence            455666666666667642   334   66778888889999998887621 2 255566677887765443     22 3


Q ss_pred             HHHHHHhcceEEcCC----------CceecccCCcCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTKD----------GRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~~----------GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ++.|.++++|++.+.          =||+++. +..+++..+++|.++
T Consensus       343 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~  389 (392)
T 3b1d_A          343 FTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCC  389 (392)
Confidence            456767889998642          2677665 566777777766554

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=91.91  E-value=0.2  Score=47.61  Aligned_cols=44  Identities=14%  Similarity=0.198  Sum_probs=34.1

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHh----hcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICK----HTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~----~aG~~  298 (420)
                      +.+.+||.|+.+++..+  +.| ||.|++++|+|+.+...++    ..|++
T Consensus        17 i~~~sG~~a~~~~~~~~--~~~-g~~v~~~~~~~~~~~~~~~~~~~~~g~~   64 (331)
T 1pff_A           17 AATASGMGAIAASVWTF--LKA-GDHLISDDCLYGCTHALFEHQLRKFGVE   64 (331)
T ss_dssp             EEESSHHHHHHHHHHHH--CCT-TCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred             EEeCChHHHHHHHHHHh--cCC-CCEEEEcCCCcchHHHHHHHHHHhcCCE
Confidence            45677799999988754  457 8999999999999877653    35654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=91.79  E-value=0.085  Score=52.82  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CH-HH-----HHHHHHhCCeEEeC-C---------
Q psy16707        339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NA-TQ-----VEKLIKEHSVYLTK-D---------  395 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~-~~-----v~~Ll~e~~Vy~~p-~---------  395 (420)
                      ++..++++.+.+.|++.|    +..+ ++.|++.|+.+       +. ++     ++.|++++||++.| +         
T Consensus       328 ~~~~~~~~~l~~~L~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~  402 (467)
T 2oqx_A          328 AYRIAQVQYLVDGLEEIG----VVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPK  402 (467)
T ss_dssp             HHHHHHHHHHHHHHHHTT----CCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT
T ss_pred             HHHHHHHHHHHHHHHHCC----Ceee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccccccccccccc
Confidence            445677888899998875    4545 56777777533       21 22     56776889999976 2         


Q ss_pred             ---------C--cEEEcc--cCCCCHHHHHHHHHHHh
Q psy16707        396 ---------G--RISMAG--VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ---------g--Ris~ag--l~~~ni~~la~AI~~vv  419 (420)
                               +  ||+++.  .++++|+++.++|.+++
T Consensus       403 ~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l  439 (467)
T 2oqx_A          403 TGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVK  439 (467)
T ss_dssp             TCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHH
T ss_pred             ccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence                     3  788773  57788999999998765

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=91.61  E-value=0.3  Score=47.04  Aligned_cols=97  Identities=10%  Similarity=0.079  Sum_probs=67.5

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L   93 (420)
                      +++..+...+...|.+.    .|   ++.++++++..|+.|.+.|++.  ++ +.. ....|+|.+..+.   .+-++.|
T Consensus       247 ~~~~~~~~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~--~~-~~~-~~~~g~~~~~~~~~~~~~l~~~l  315 (364)
T 1lc5_A          247 SVNALAALAGEVALQDS----AW---QQATWHWLREEGARFYQALCQL--PL-LTV-YPGRANYLLLRCEREDIDLQRRL  315 (364)
T ss_dssp             CSCHHHHHHHHHGGGCH----HH---HHHHHHHHHHHHHHHHHHHHTS--TT-EEE-CCCSSSEEEEEESCTTCCHHHHH
T ss_pred             CCCHHHHHHHHHHHhCc----HH---HHHHHHHHHHHHHHHHHHHhcC--CC-CEE-CCCCCeEEEEECCCcHHHHHHHH
Confidence            45666777888888872    33   6677888999999999999865  22 443 3456777665543   2456677


Q ss_pred             HHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      . +++|++.+        .+  ||+++  +..+++.+.+++.++
T Consensus       316 ~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~  356 (364)
T 1lc5_A          316 L-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNV  356 (364)
T ss_dssp             H-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             H-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHH
Confidence            6 45999864        23  67765  467889999999887

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=91.57  E-value=0.79  Score=43.56  Aligned_cols=85  Identities=13%  Similarity=0.152  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc----cccee--ecCCCHHHHHHHHHhcceEEcCC---------
Q psy16707         40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQ----IGMFC--YTGLNATQVEKLIKEHSVYLTKD---------  104 (420)
Q Consensus        40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q----~GmFs--~~gL~~~qv~~L~~~~~IY~~~~---------  104 (420)
                      .+.++.++++++.+|+.|.+.|++..   .+.....+    -++++  +.+.+.+++...-++++|++...         
T Consensus       251 ~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~  327 (382)
T 4hvk_A          251 AMEWREEAERLRRLRDRIIDNVLKIE---ESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQ  327 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTST---TEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------C
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCc
Confidence            35678889999999999999997542   12222222    12333  45778877766556779988642         


Q ss_pred             ----------------C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707        105 ----------------G--RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ----------------G--Rinvagl-~~~ni~~va~ai~~v  127 (420)
                                      +  ||++... +..++++++++|.++
T Consensus       328 ~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~  369 (382)
T 4hvk_A          328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV  369 (382)
T ss_dssp             CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence                            2  6776643 467899999888876

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=91.44  E-value=1.6  Score=42.22  Aligned_cols=83  Identities=17%  Similarity=0.292  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeecC-----CCHHHHHHHHHhcceEEcCC----------
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYTG-----LNATQVEKLIKEHSVYLTKD----------  104 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~g-----L~~~qv~~L~~~~~IY~~~~----------  104 (420)
                      +.++.++++++.+|+.|.+.|++.+    +..+. ...|.|...-     .+.+++...-.+++|++...          
T Consensus       277 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~  352 (407)
T 2dkj_A          277 PEFKEYSRLVVENAKRLAEELARRG----YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPR  352 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCC----ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcccccccc
Confidence            4567788999999999999998863    44333 2456555443     35666654446789987642          


Q ss_pred             ----Cceeccc-----CCcCCHHHHHHHHHhh
Q psy16707        105 ----GRISMAG-----VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ----GRinvag-----l~~~ni~~va~ai~~v  127 (420)
                          =||+++.     .+..++++++++|.++
T Consensus       353 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~  384 (407)
T 2dkj_A          353 VTSGIRIGTPAITTRGFTPEEMPLVAELIDRA  384 (407)
T ss_dssp             TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred             CCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence                2778764     7899999999999887

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=91.00  E-value=0.98  Score=42.92  Aligned_cols=96  Identities=17%  Similarity=0.282  Sum_probs=66.5

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHH-HHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQ-VEK   92 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~q-v~~   92 (420)
                      +++..+...+...|.+.    +|   ++.++++++..|+.|.+.|++.+    |. +....|+|.+.-+.   .++ .+.
T Consensus       232 ~~~~~~~~~~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~  299 (335)
T 1uu1_A          232 NVSYVSQMFAKVALDHR----EI---FEERTKFIVEERERMKSALREMG----YR-ITDSRGNFVFVFMEKEEKERLLEH  299 (335)
T ss_dssp             CSCHHHHHHHHHHHHTH----HH---HHHHHHHHHHHHHHHHHHHHHHT----CC-BCCCCSSEEEEECCTHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHhCCH----HH---HHHHHHHHHHHHHHHHHHHHHCC----cE-EcCCCCeEEEEECCCCCHHHHHHH
Confidence            66777888888888762    34   55667888899999999998763    33 33556888777664   233 455


Q ss_pred             HHHhcceEEcC-CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         93 LIKEHSVYLTK-DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        93 L~~~~~IY~~~-~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      |. +++|++.+ .|  ||+++.  +.+++.++++|.++
T Consensus       300 l~-~~gi~v~~~~~~iRis~~~--~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          300 LR-TKNVAVRSFREGVRITIGK--REENDMILRELEVF  334 (335)
T ss_dssp             HH-HHTEEEEEETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred             HH-HCCEEEEECCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence            65 57999863 33  788753  46788888887653

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=90.84  E-value=0.47  Score=48.48  Aligned_cols=83  Identities=19%  Similarity=0.305  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----cccceee--cCCCHHHHHHHHHhcceEEc----CC------
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGMFCY--TGLNATQVEKLIKEHSVYLT----KD------  104 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~----Q~GmFs~--~gL~~~qv~~L~~~~~IY~~----~~------  104 (420)
                      .+++++.+++..+|+.|.+.|++.|    +..+..    +..+..+  .|++.+++..+-++++|.+.    +.      
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~  396 (483)
T 1rv3_A          321 PEFKEYQRQVVANCRALSAALVELG----YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALR  396 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcC----CEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCC
Confidence            3567788999999999999998764    332222    1123333  27788888877788999987    31      


Q ss_pred             ---CceecccCC-----cCCHHHHHHHHHhh
Q psy16707        105 ---GRISMAGVT-----SKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ---GRinvagl~-----~~ni~~va~ai~~v  127 (420)
                         =||+++..|     ..++++++++|.++
T Consensus       397 ~~~iRis~~~~~t~g~~~edi~~~~~~l~~~  427 (483)
T 1rv3_A          397 PSGLRLGTPALTSRGLLEKDFQKVAHFIHRG  427 (483)
T ss_dssp             CCEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CceEEeecCCcccCCCCHHHHHHHHHHHHHH
Confidence               167776543     68999999999887

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=90.34  E-value=1.1  Score=42.51  Aligned_cols=109  Identities=16%  Similarity=0.173  Sum_probs=65.3

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--c-ccccceeecCCCH-
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHI--T-DQIGMFCYTGLNA-   87 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i--~-~Q~GmFs~~gL~~-   87 (420)
                      +..+++||..+...+...|.  .+.+.  ..++.++++++..|+.|.+.|++.+  +-+...  . .+.|+|...-+.. 
T Consensus       233 ~~~~~~~~~~~~~~~~~al~--~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  306 (360)
T 1w23_A          233 DSLYNTPPTFSIYMLRNVLD--WIKDL--GGAEAIAKQNEEKAKIIYDTIDESN--GFYVGHAEKGSRSLMNVTFNLRNE  306 (360)
T ss_dssp             TTCSSCCCHHHHHHHHHHHH--HHHHT--THHHHHHHHHHHHHHHHHHHHHTTT--TSSEESSCGGGBCSSEEEEECSSH
T ss_pred             cCCCCCCCHHHHHHHHHHHH--HHHHh--cCHHHHHHHHHHHHHHHHHHHHHcc--CcccccCCchhccCcEEEEEcCCC
Confidence            35567777776555554442  11111  0367889999999999999998764  211322  1 1446444444432 


Q ss_pred             ---HH-HHHHHHhcceEEcCC----C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707         88 ---TQ-VEKLIKEHSVYLTKD----G--RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ---~q-v~~L~~~~~IY~~~~----G--Rinvagl-~~~ni~~va~ai~~v  127 (420)
                         ++ ++.| .+++|.+.+.    |  ||++... +.+.+++++++|.++
T Consensus       307 ~~~~~~~~~l-~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~  356 (360)
T 1w23_A          307 ELNQQFLAKA-KEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQF  356 (360)
T ss_dssp             HHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHH-HHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence               22 2334 3478887543    2  7777653 667899999998765

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=90.13  E-value=0.74  Score=44.74  Aligned_cols=80  Identities=10%  Similarity=0.049  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcCC-----------C
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------G  105 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~~-----------G  105 (420)
                      +++.++++++..|+.|.+.|++.+    |..+. ..|+|...-+.    . +-++.|.++ +|++.+.           =
T Consensus       292 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~g~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~i  365 (398)
T 3a2b_A          292 NEPEHIEKLWKNTDYAKAQLLDHG----FDLGA-TESPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLI  365 (398)
T ss_dssp             HCTHHHHHHHHHHHHHHHHHHHTT----CCBCS-CCSSEEEEECCCHHHHHHHHHHHHHT-TEECEEECTTTSCGGGCEE
T ss_pred             hCHHHHHHHHHHHHHHHHHHHhcC----CCcCC-CCCCEEEEEcCCHHHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceE
Confidence            477889999999999999998863    44333 34777666554    2 334567666 9988642           3


Q ss_pred             ceeccc-CCcCCHHHHHHHHHhh
Q psy16707        106 RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      ||+++. ++..+++.++++|.++
T Consensus       366 Ris~~~~~~~e~i~~~~~~l~~~  388 (398)
T 3a2b_A          366 RFSLMATHTYDQIDEAIEKMVKV  388 (398)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHHH
Confidence            788887 6889999999998876

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=90.12  E-value=0.36  Score=48.59  Aligned_cols=38  Identities=8%  Similarity=0.113  Sum_probs=29.8

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +.+.||+.|+.+++..+  +.| ||.|++++|.|+.....+
T Consensus       101 i~~ssGt~Ai~~al~~l--~~~-Gd~Vi~~~~~y~~~~~~~  138 (415)
T 2fq6_A          101 VLFPCGAAAVANSILAF--IEQ-GDHVLMTNTAYEPSQDFC  138 (415)
T ss_dssp             EEESSHHHHHHHHHHTT--CCT-TCEEEEETTSCHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHH--hCC-CCEEEEeCCCchHHHHHH
Confidence            45789999998877532  457 999999999998776554

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=89.82  E-value=2.4  Score=40.49  Aligned_cols=80  Identities=15%  Similarity=0.069  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HhcCCCCCCcccc-c----cccceeecCC--CHHHHHHHHHhcceEEcCC-------C--
Q psy16707         43 VKGMADRIISMRQSLKDNL-QKEGSNKPWNHIT-D----QIGMFCYTGL--NATQVEKLIKEHSVYLTKD-------G--  105 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L-~~~~~~~~w~~i~-~----Q~GmFs~~gL--~~~qv~~L~~~~~IY~~~~-------G--  105 (420)
                      ++.++++++.+|+.|.+.| ++.+    +..+. .    ..|.|....+  ..+-++.|. +++|++...       +  
T Consensus       279 ~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~i  353 (385)
T 2bkw_A          279 LHKRWDLHREMSDWFKDSLVNGLQ----LTSVSRYPSNMSAHGLTAVYVADPPDVIAFLK-SHGVVIAGGIHKDIGPKYI  353 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTC----CEESSCSSSTTBCSSCEEEECSCHHHHHHHHH-HTTEECBCCCCTTTGGGEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC----ceecccCcccccCCceEEEecCCHHHHHHHHH-HCCeEEeCCCCcccCCCEE
Confidence            7788999999999999999 7652    33332 1    2344433333  234455664 679988642       2  


Q ss_pred             cee-cc----cCCcCCHHHHHHHHHhh
Q psy16707        106 RIS-MA----GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 Rin-va----gl~~~ni~~va~ai~~v  127 (420)
                      ||+ ++    ..+.++++.++++|.++
T Consensus       354 Ris~~~~~~~~~~~e~i~~~~~~l~~~  380 (385)
T 2bkw_A          354 RIGHMGVTACNKNLPYMKNCFDLIKLA  380 (385)
T ss_dssp             EECCCGGGTSSTTCTHHHHHHHHHHHH
T ss_pred             EEEccccccccCCHHHHHHHHHHHHHH
Confidence            666 54    46899999999999887

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=89.35  E-value=0.39  Score=48.87  Aligned_cols=36  Identities=14%  Similarity=0.147  Sum_probs=29.7

Q ss_pred             cccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHH
Q psy16707        254 GISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPIC  292 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~  292 (420)
                      +.|||.|+..++.  ..+.| ||+|++++ |.|+.+..++
T Consensus        98 ~~sGt~A~~~al~--all~p-GD~Vl~~~~~~y~~~~~~~  134 (427)
T 3hvy_A           98 FVNGTHAIGAALF--GNLRP-NDTMMSICGMPYDTLHDII  134 (427)
T ss_dssp             CCSHHHHHHHHHH--HTCCT-TCEEEECSSSCCGGGHHHH
T ss_pred             CCcHHHHHHHHHH--HhcCC-CCEEEEeCCCCchhHHHHh
Confidence            8999999987765  33668 99999999 9999888555

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=89.16  E-value=0.99  Score=45.19  Aligned_cols=106  Identities=13%  Similarity=0.118  Sum_probs=65.2

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc-cceee--c--CC
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLT-E--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI-GMFCY--T--GL   85 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~-e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~-GmFs~--~--gL   85 (420)
                      .|-+||..|..-...-|.       |.. +  ++.+.+|.+.+++.|++.|++.+.-.....-..+. +..+|  -  ++
T Consensus       261 ~~gTp~v~~i~~l~~Al~-------~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~  333 (386)
T 3qm2_A          261 MFNTPPTFAWYLSGLVFK-------WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTL  333 (386)
T ss_dssp             -----CCSHHHHHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGG
T ss_pred             CCCCCcHHHHHHHHHHHH-------HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccc
Confidence            355888887665554442       433 3  79999999999999999998864211111111222 34444  3  46


Q ss_pred             CHHHHHHHHHhcceEEcC------CCceecccC-CcCCHHHHHHHHHhh
Q psy16707         86 NATQVEKLIKEHSVYLTK------DGRISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~qv~~L~~~~~IY~~~------~GRinvagl-~~~ni~~va~ai~~v  127 (420)
                      .++-+..| ++++|++..      .=||++.+- +..+||+++++|.++
T Consensus       334 ~~~~~~~L-~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~  381 (386)
T 3qm2_A          334 DKVFLEES-FAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDF  381 (386)
T ss_dssp             HHHHHHHH-HHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHH-HHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            65556666 467888643      236777665 468999999999875

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=88.86  E-value=0.97  Score=45.70  Aligned_cols=84  Identities=7%  Similarity=0.153  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-ccccceeec--CCCHHHHHHHHHhcceEEcCC-----CceecccCC
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-DQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----GRISMAGVT  113 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~-----GRinvagl~  113 (420)
                      .++++.+++..+++.|.+.|++. .+ .+..+. .+.++|++.  |++..++...-.+++|++...     -|+++...+
T Consensus       342 ~~~~~~~~~~~~~~~l~~~L~~~-~~-g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~~~t  419 (497)
T 3mc6_A          342 GYIESCQEIVGAAMKFKKYIQEN-IP-DLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFTRLS  419 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHS-CT-TCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECCTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-CC-CEEEecCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEeCCC
Confidence            45677888889999999999874 11 133332 456677764  556666554445668876532     289999899


Q ss_pred             cCCHHHHHHHHHhh
Q psy16707        114 SKNVGYLAKAIHAN  127 (420)
Q Consensus       114 ~~ni~~va~ai~~v  127 (420)
                      ..+++.++++|.++
T Consensus       420 ~e~i~~~~~~L~~~  433 (497)
T 3mc6_A          420 AHVVDEICDILRTT  433 (497)
T ss_dssp             TCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998886

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=88.82  E-value=1.2  Score=44.11  Aligned_cols=108  Identities=14%  Similarity=0.210  Sum_probs=69.5

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhcCCC-CCCcccccc-ccceee--cC
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWLT-E--VKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQ-IGMFCY--TG   84 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~-e--l~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q-~GmFs~--~g   84 (420)
                      ...|-+||.+|..-...-|.       |.. +  ++.+.+|.+.+++.|++.|++.+.- .....-..+ .+..+|  -|
T Consensus       232 ~~~~~Tp~v~~i~~l~~al~-------~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~  304 (361)
T 3m5u_A          232 QSLFNTPPTFAIYMFNLEMD-------WLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAK  304 (361)
T ss_dssp             TTCSSCCCHHHHHHHHHHHH-------HHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESS
T ss_pred             CCCCCCccHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCC
Confidence            34567888887665554443       443 3  7899999999999999999876521 000001112 245555  33


Q ss_pred             ---CCHHHHHHHHHhcceEEcCC------CceecccC-CcCCHHHHHHHHHhh
Q psy16707         85 ---LNATQVEKLIKEHSVYLTKD------GRISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 ---L~~~qv~~L~~~~~IY~~~~------GRinvagl-~~~ni~~va~ai~~v  127 (420)
                         +.++-+..| ++++|++...      =||++.+- +..+||+++++|.++
T Consensus       305 ~~~~~~~~~~~L-~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~  356 (361)
T 3m5u_A          305 NKDLEPLFVKEA-EEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEF  356 (361)
T ss_dssp             CTTHHHHHHHHH-HHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHH-HHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence               554445556 5669987533      27787776 558899999999875

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=88.77  E-value=2.1  Score=41.74  Aligned_cols=83  Identities=12%  Similarity=0.220  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cc--eeecCCCHHHHHHHHHhcceEEcCC---------
Q psy16707         40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GM--FCYTGLNATQVEKLIKEHSVYLTKD---------  104 (420)
Q Consensus        40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----Gm--Fs~~gL~~~qv~~L~~~~~IY~~~~---------  104 (420)
                      .++++.++++++.+|+.|.+.|++..   .+..+..+.    ++  |.+.+.+.+++...-.+  |++...         
T Consensus       279 ~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~  353 (423)
T 3lvm_A          279 KEEMATEMERLRGLRNRLWNGIKDIE---EVYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASLE  353 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTST---TEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----CC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCcc
Confidence            34488999999999999999997652   133332221    33  34467777776554444  555432         


Q ss_pred             ----------------C--ceecccC-CcCCHHHHHHHHHhh
Q psy16707        105 ----------------G--RISMAGV-TSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ----------------G--Rinvagl-~~~ni~~va~ai~~v  127 (420)
                                      +  ||+++.. +..+|++++++|.++
T Consensus       354 ~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~  395 (423)
T 3lvm_A          354 PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS  395 (423)
T ss_dssp             CCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHH
Confidence                            1  7777744 458899999998887

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=88.75  E-value=0.76  Score=44.36  Aligned_cols=81  Identities=15%  Similarity=0.225  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH-HHHHHHHhcceEEcCC-----------C
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT-QVEKLIKEHSVYLTKD-----------G  105 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~-qv~~L~~~~~IY~~~~-----------G  105 (420)
                      .++.++++++..|+.|.+.|++.+    |.... ..|.|...-+    +.+ -++.|.+ ++|++.+.           =
T Consensus       287 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~  360 (384)
T 1bs0_A          287 EGDARREKLAALITRFRAGVQDLP----FTLAD-SCSAIQPLIVGDNSRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARL  360 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSS----CEECS-CCSSBCCEEEESHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcC----CcccC-CCCCEEEEEeCCHHHHHHHHHHHHH-CCcEEEeecCCCCCCCCceE
Confidence            456788899999999999998763    43332 3344332222    233 3455655 49988632           2


Q ss_pred             ceeccc-CCcCCHHHHHHHHHhhC
Q psy16707        106 RISMAG-VTSKNVGYLAKAIHANG  128 (420)
Q Consensus       106 Rinvag-l~~~ni~~va~ai~~v~  128 (420)
                      ||+++. ++..+++.++++|.++|
T Consensus       361 Ri~~~~~~~~~~i~~~~~~l~~~~  384 (384)
T 1bs0_A          361 RLTLTAAHEMQDIDRLLEVLHGNG  384 (384)
T ss_dssp             CCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred             EEEEcCCCCHHHHHHHHHHHHhhC
Confidence            788874 47899999999998864

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=88.67  E-value=0.35  Score=49.39  Aligned_cols=88  Identities=16%  Similarity=0.172  Sum_probs=55.6

Q ss_pred             CCchHHHHHHHHHHHccCCCCCCCCCCCCH---HHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceee
Q psy16707        177 PYVLPSVKQADEIVLNKNLDKEYAPIIGAP---DFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQ  253 (420)
Q Consensus       177 ~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~---~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vq  253 (420)
                      ++.++...++..........+.|.- .+.+   ++++.+++++ |..      + .                      +.
T Consensus        86 t~~~~~~~~~~~~~~~~~~~~~y~r-~~~~~~~~l~~~lA~l~-g~~------~-~----------------------v~  134 (445)
T 1qgn_A           86 AYFFNKTSELIDFKEKRRASFEYGR-YGNPTTVVLEEKISALE-GAE------S-T----------------------LL  134 (445)
T ss_dssp             BBCBSSHHHHHHHHTTSSCCCCBGG-GCCHHHHHHHHHHHHHH-TCS------E-E----------------------EE
T ss_pred             ceecCCHHHHHhhhccccCCccccC-CCChHHHHHHHHHHHHh-CCC------c-E----------------------EE
Confidence            3445555555443322233566753 3444   8999999876 321      1 1                      45


Q ss_pred             cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH----hhcCcc
Q psy16707        254 GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC----KHTGLE  298 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~----~~aG~~  298 (420)
                      +.+|+.|+.+++..+  +.| ||.|++++|+|+++...+    +..|++
T Consensus       135 ~~sG~~Ai~~al~~l--~~~-Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~  180 (445)
T 1qgn_A          135 MASGMCASTVMLLAL--VPA-GGHIVTTTDCYRKTRIFIETILPKMGIT  180 (445)
T ss_dssp             ESCHHHHHHHHHHHH--SCS-SCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred             eCCHHHHHHHHHHHH--hCC-CCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence            778889998887644  457 999999999999877643    445654

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=88.64  E-value=0.94  Score=43.43  Aligned_cols=77  Identities=10%  Similarity=0.120  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---HHHHHHHHHhcceEEcC--CCc--eecc-cCCcCC
Q psy16707         45 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTK--DGR--ISMA-GVTSKN  116 (420)
Q Consensus        45 ~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---~~qv~~L~~~~~IY~~~--~GR--inva-gl~~~n  116 (420)
                      .+.++++.+|+.|.+.|++.+.     ......|+|...-+.   .+-++.|. +++|++.+  .+.  |+++ ..+..+
T Consensus       290 ~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~l~-~~gi~~~~~~~~~iRi~~~~~~~~~~  363 (375)
T 2eh6_A          290 KLLPHVREVGNYFKEKLKELGK-----GKVKGRGLMLGLELERECKDYVLKAL-EKGLLINCTAGKVLRFLPPLIIQKEH  363 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTS-----SEEEEETTEEEEECSSCCHHHHHHHH-HTTEECEEETTTEEEECCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEEEEEEEcCcHHHHHHHHH-HCCCEEecCCCCEEEEECCCCCCHHH
Confidence            6778888899999999987642     123456777665553   45566776 57998864  344  4444 688899


Q ss_pred             HHHHHHHHHhh
Q psy16707        117 VGYLAKAIHAN  127 (420)
Q Consensus       117 i~~va~ai~~v  127 (420)
                      +++++++|.++
T Consensus       364 i~~~~~~l~~~  374 (375)
T 2eh6_A          364 IDRAISVLREI  374 (375)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998764

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=88.18  E-value=0.41  Score=47.01  Aligned_cols=80  Identities=16%  Similarity=0.198  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcC--CCCCCccccccccceeecCCC------------H-HHHHHHHHhcceEEcCCC----
Q psy16707         45 GMADRIISMRQSLKDNLQKEG--SNKPWNHITDQIGMFCYTGLN------------A-TQVEKLIKEHSVYLTKDG----  105 (420)
Q Consensus        45 ~m~~Ri~~~R~~l~~~L~~~~--~~~~w~~i~~Q~GmFs~~gL~------------~-~qv~~L~~~~~IY~~~~G----  105 (420)
                      .+.+++..+|+.|.+.|++.+  .+. +..+. ..|+|...-+.            . +-++.|. +++|++.+.+    
T Consensus       319 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~  395 (426)
T 1sff_A          319 NLLQKANDLGQKLKDGLLAIAEKHPE-IGDVR-GLGAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPYYN  395 (426)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCTT-EEEEE-EETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTTSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEE-EEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCCCC
Confidence            345667777777777776543  121 22222 34777665552            2 2345665 4699987644    


Q ss_pred             --ceecc-cCCcCCHHHHHHHHHhh
Q psy16707        106 --RISMA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 --Rinva-gl~~~ni~~va~ai~~v  127 (420)
                        ||+++ ..+..+++.++++|.++
T Consensus       396 ~iRi~~~~~~~~~~i~~~~~~l~~~  420 (426)
T 1sff_A          396 VLRILVPLTIEDAQIRQGLEIISQC  420 (426)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEECCccCCHHHHHHHHHHHHHH
Confidence              78877 78899999999998875

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=88.12  E-value=1.2  Score=43.15  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC----H-HHHHHHHHhcceEEcCC-----------Cc
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN----A-TQVEKLIKEHSVYLTKD-----------GR  106 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~----~-~qv~~L~~~~~IY~~~~-----------GR  106 (420)
                      .+.++++++.+|+.|.+.|++.+    |..+ ...|.|...-+.    . +-++.|.+ ++|++.+.           =|
T Consensus       298 ~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iR  371 (401)
T 1fc4_A          298 GSELRDRLWANARQFREQMSAAG----FTLA-GADHAIIPVMLGDAVVAQKFARELQK-EGIYVTGFFYPVVPKGQARIR  371 (401)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT----CCBC-CSSSSEEEEEEECHHHHHHHHHHHHH-TTEECCEECTTSSCTTCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcC----Cccc-CCCCCEEEEEcCChHHHHHHHHHHHH-CCcEEeeecCCCCCCCCceEE
Confidence            56788899999999999998863    3333 345555544332    2 33456655 49988642           36


Q ss_pred             eecc-cCCcCCHHHHHHHHHhh
Q psy16707        107 ISMA-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       107 inva-gl~~~ni~~va~ai~~v  127 (420)
                      |+++ ..+..+++.++++|.++
T Consensus       372 i~~~~~~~~~~i~~~~~~l~~~  393 (401)
T 1fc4_A          372 TQMSAAHTPEQITRAVEAFTRI  393 (401)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHHHHHHHHH
Confidence            7876 46889999999998876

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=87.82  E-value=0.91  Score=43.88  Aligned_cols=83  Identities=18%  Similarity=0.139  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc----cceee--cCCCHHHHHHHHHhcceEEcCC---------
Q psy16707         40 LTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI----GMFCY--TGLNATQVEKLIKEHSVYLTKD---------  104 (420)
Q Consensus        40 ~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~----GmFs~--~gL~~~qv~~L~~~~~IY~~~~---------  104 (420)
                      .+.++.++++++.+|+.|.+.|+ .  + .+..+..+.    +++++  .+.+.+++...-. ++|++...         
T Consensus       279 ~~~~~~~~~~~~~~~~~l~~~L~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~  353 (400)
T 3vax_A          279 EAEHAQWQVAAQDLRSRLLAGLA-S--T-SFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLK-DLVAVATGSASTSASFT  353 (400)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHT-T--T-TCEECSCTTSBCTTEEEEECTTCCHHHHHHHHH-HHHHHTTTTEEEEEEEC
T ss_pred             HhhHHHHHHHHHHHHHHHHHhhC-C--C-CEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh-cCcEEEecccccCCCCC
Confidence            34578899999999999999997 2  2 244444333    35544  3566666544334 78876542         


Q ss_pred             ----------------C--ceec-c-cCCcCCHHHHHHHHHhh
Q psy16707        105 ----------------G--RISM-A-GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 ----------------G--Rinv-a-gl~~~ni~~va~ai~~v  127 (420)
                                      +  ||++ . ..+...+++++++|.++
T Consensus       354 ~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~  396 (400)
T 3vax_A          354 PSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKL  396 (400)
T ss_dssp             CHHHHHTTTCCHHHHTSEEEEEEEEC-----------------
T ss_pred             ccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHH
Confidence                            2  6676 3 35678899999888775

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=87.58  E-value=0.79  Score=45.48  Aligned_cols=81  Identities=15%  Similarity=0.181  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-cc-cccceeec-C--C-CHHHHHHHHHhcceEEcCC-----------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHI-TD-QIGMFCYT-G--L-NATQVEKLIKEHSVYLTKD-----------  104 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i-~~-Q~GmFs~~-g--L-~~~qv~~L~~~~~IY~~~~-----------  104 (420)
                      +++.++++++.+|+.|.+.|++.+    |..+ .. +.+|+++. +  . ..+-++.|.++ +|++.+.           
T Consensus       313 ~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~  387 (427)
T 2w8t_A          313 TAHEKRERLWSNARALHGGLKAMG----FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDG-GLYVNMARPPATPAGTFL  387 (427)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT----CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHT-TEECEEECTTTSCTTCEE
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHcC----CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeE
Confidence            367788999999999999998873    4433 22 33444432 1  1 22344567655 9998642           


Q ss_pred             Cceeccc-CCcCCHHHHHHHHHhh
Q psy16707        105 GRISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 GRinvag-l~~~ni~~va~ai~~v  127 (420)
                      -||+++. .+..+|+.++++|.++
T Consensus       388 lRi~~~~~~t~e~i~~~~~~l~~~  411 (427)
T 2w8t_A          388 LRCSICAEHTPAQIQTVLGMFQAA  411 (427)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3677776 5788999999998876

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=87.29  E-value=1.1  Score=45.14  Aligned_cols=36  Identities=19%  Similarity=0.157  Sum_probs=30.1

Q ss_pred             cccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHH
Q psy16707        254 GISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPIC  292 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~  292 (420)
                      +.|||.|+.+++..+  +.| ||+|++++ |.|+.+..++
T Consensus        83 ~~sGt~Ai~~al~al--l~~-GD~Vl~~~~~~y~~~~~~~  119 (409)
T 3jzl_A           83 IISGTHAISTVLFGI--LRP-DDELLYITGQPYDTLEEIV  119 (409)
T ss_dssp             SCSHHHHHHHHHHHH--CCT-TCEEEECSSSCCTTHHHHH
T ss_pred             CccHHHHHHHHHHHh--cCC-CCEEEEeCCCCcHhHHHHH
Confidence            899999998877533  567 99999999 9999998655

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=87.28  E-value=1.1  Score=43.31  Aligned_cols=83  Identities=22%  Similarity=0.336  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHHHhcceEEcCC----------
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLTKD----------  104 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~GmFs~~-----gL~~~qv~~L~~~~~IY~~~~----------  104 (420)
                      +.++.+++++..+|+.|.+.|++.+    +..+.. ..|.|...     |.+.+++...-.+++|++.+.          
T Consensus       276 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~  351 (405)
T 2vi8_A          276 DDFKAYAKRVVDNAKRLASALQNEG----FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPF  351 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCC
Confidence            3566788899999999999998863    443332 23554443     345666655447789987641          


Q ss_pred             --C--ceeccc-----CCcCCHHHHHHHHHhh
Q psy16707        105 --G--RISMAG-----VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 --G--Rinvag-----l~~~ni~~va~ai~~v  127 (420)
                        +  ||+++.     ++..++++++++|.++
T Consensus       352 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~  383 (405)
T 2vi8_A          352 VTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV  383 (405)
T ss_dssp             TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence              2  888884     7899999999999887

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=86.70  E-value=3.3  Score=42.77  Aligned_cols=94  Identities=13%  Similarity=0.265  Sum_probs=63.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc--cccc--eee--cCCCHHHHHHHHHhcceEEcCC---
Q psy16707         34 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGM--FCY--TGLNATQVEKLIKEHSVYLTKD---  104 (420)
Q Consensus        34 ~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~--Q~Gm--Fs~--~gL~~~qv~~L~~~~~IY~~~~---  104 (420)
                      .|+..+..+.++..+++...++.|.+.|.+.|    |.-+..  +.-+  +.+  .|++.++++.+-++.+|++..+   
T Consensus       324 Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G----~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p  399 (490)
T 2a7v_A          324 ALKQACTPMFREYSLQVLKNARAMADALLERG----YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCP  399 (490)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCT
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccC
Confidence            34455555667778888999999999998764    332221  1112  222  3678888877778889998632   


Q ss_pred             --------Cceec-------ccCCcCCHHHHHHHHHhhCCCc
Q psy16707        105 --------GRISM-------AGVTSKNVGYLAKAIHANGSLP  131 (420)
Q Consensus       105 --------GRinv-------agl~~~ni~~va~ai~~v~~~p  131 (420)
                              ++|-+       -|+++.++++++++|.++-++.
T Consensus       400 ~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~  441 (490)
T 2a7v_A          400 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG  441 (490)
T ss_dssp             TCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence                    33333       2678899999999999886554

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=86.69  E-value=0.26  Score=48.88  Aligned_cols=60  Identities=12%  Similarity=0.034  Sum_probs=42.7

Q ss_pred             CCCCC--CCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCC
Q psy16707        196 DKEYA--PIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFP  273 (420)
Q Consensus       196 ~~~Y~--p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p  273 (420)
                      .|.|.  +..+..++++++++++ |.+       .+                      +.+.+||.|+.+++. +  +.|
T Consensus        46 ~~~~~~~~~~~~~~lr~~la~~~-g~~-------~~----------------------i~~~sGt~a~~~al~-~--~~~   92 (393)
T 1n8p_A           46 TYEYSRSQNPNRENLERAVAALE-NAQ-------YG----------------------LAFSSGSATTATILQ-S--LPQ   92 (393)
T ss_dssp             SCCBTTTCCHHHHHHHHHHHHHT-TCS-------EE----------------------EEESCHHHHHHHHHH-T--SCS
T ss_pred             CcceecCCChhHHHHHHHHHHHh-CCC-------cE----------------------EEECChHHHHHHHHH-H--cCC
Confidence            34554  3345679999999975 322       11                      557778999999887 4  447


Q ss_pred             CCCEEEEcCCCCCCcH
Q psy16707        274 GEKVIYVPTPTWGNHI  289 (420)
Q Consensus       274 ~gd~VlvpdP~w~ny~  289 (420)
                       ||.|++++|+|++..
T Consensus        93 -gd~Vi~~~~~y~~~~  107 (393)
T 1n8p_A           93 -GSHAVSIGDVYGGTH  107 (393)
T ss_dssp             -SCEEEEESSCCHHHH
T ss_pred             -CCEEEEeCCCchHHH
Confidence             899999999998433

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=86.49  E-value=0.7  Score=46.95  Aligned_cols=36  Identities=11%  Similarity=0.063  Sum_probs=29.9

Q ss_pred             cccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHH
Q psy16707        254 GISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPIC  292 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~  292 (420)
                      +.|||.|+..++..+  +.| ||+|++++ |.|+.+..++
T Consensus        97 ~~sGt~Ai~~al~al--l~p-GD~Vl~~~~~~y~~~~~~~  133 (427)
T 3i16_A           97 FVNGTHALGAALFGN--LRP-GNTMLSVCGEPYDTLHDVI  133 (427)
T ss_dssp             CCSHHHHHHHHHHHH--CCT-TCEEEESSSSCCGGGHHHH
T ss_pred             CccHHHHHHHHHHHH--hCC-CCEEEEeCCCccHHHHHHH
Confidence            899999998776533  568 99999999 9999988665

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=86.40  E-value=1.3  Score=42.99  Aligned_cols=82  Identities=17%  Similarity=0.185  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHHHhcceEEcCC--C--ceecc-cCCcC
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKD--G--RISMA-GVTSK  115 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~~L~~~~~IY~~~~--G--Rinva-gl~~~  115 (420)
                      ..+.++++.+|+.|.+.|++.+.+  +-......|+|...-+   ..+-++.|.++++|.+.+.  +  ||+++ ..+..
T Consensus       304 ~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~~~~~  381 (395)
T 1vef_A          304 TRLWERAAELGPWFMEKLRAIPSP--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKE  381 (395)
T ss_dssp             HTTHHHHHHHHHHHHHHHHTSCCT--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcC--ceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHH
Confidence            357888999999999999876532  1111234565544433   4455677875789988754  3  45544 56778


Q ss_pred             CHHHHHHHHHhh
Q psy16707        116 NVGYLAKAIHAN  127 (420)
Q Consensus       116 ni~~va~ai~~v  127 (420)
                      +++.++++|.++
T Consensus       382 ~i~~~~~~l~~~  393 (395)
T 1vef_A          382 DLERVVEAVRAV  393 (395)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998775

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=85.85  E-value=1.2  Score=43.23  Aligned_cols=83  Identities=20%  Similarity=0.298  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-cccceeec-----CCCHHHHHHHHHhcceEEc----CC------
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD-QIGMFCYT-----GLNATQVEKLIKEHSVYLT----KD------  104 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~-Q~GmFs~~-----gL~~~qv~~L~~~~~IY~~----~~------  104 (420)
                      ++++.+++++..+++.|.+.|++.+    |..+.. ..|.|...     +.+.+.+..+-++++|++.    +.      
T Consensus       286 ~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~  361 (425)
T 3ecd_A          286 DDFKTYIDRVLANAQALGDVLKAGG----VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPT  361 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCC----CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence            5567788899999999999998743    443332 23333322     5577777776688899987    21      


Q ss_pred             --C--ceecc-----cCCcCCHHHHHHHHHhh
Q psy16707        105 --G--RISMA-----GVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       105 --G--Rinva-----gl~~~ni~~va~ai~~v  127 (420)
                        +  ||+..     +++...++.++++|.++
T Consensus       362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~  393 (425)
T 3ecd_A          362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEV  393 (425)
T ss_dssp             TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence              2  33322     33468888998888776

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=85.50  E-value=3.6  Score=40.02  Aligned_cols=105  Identities=15%  Similarity=0.141  Sum_probs=67.3

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--c--ccc-ceee---
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--D--QIG-MFCY---   82 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~--~--Q~G-mFs~---   82 (420)
                      ..+++|+..+...+...|.      ...++  ++.++++++..|+.|.+.|++..   .+..+.  .  +.| ++++   
T Consensus       270 ~~~~t~~~~~~~a~~~al~------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~  340 (398)
T 2fyf_A          270 QTYNTPAIATLALLAEQID------WLVGNGGLDWAVKRTADSSQRLYSWAQERP---YTTPFVTDPGLRSQVVGTIDFV  340 (398)
T ss_dssp             CCSSCCCHHHHHHHHHHHH------HHHHHTSHHHHHHHHHHHHHHHHHHHHHST---TEEESCCSGGGBCSSEEEEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHH------HHHHccCHHHHHHHHHHHHHHHHHHHHHcC---CceeccCChhhcCCcEEEEECC
Confidence            3456677665554444442      12333  88899999999999999998762   243332  2  456 3333   


Q ss_pred             cCCCHHH-HHHHHHhcceEEcC------CC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQ-VEKLIKEHSVYLTK------DG--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~q-v~~L~~~~~IY~~~------~G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      -|++.++ ++.|.++ +|++..      .+  ||++.. .+..+++.++++|.++
T Consensus       341 ~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  394 (398)
T 2fyf_A          341 DDVDAGTVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWV  394 (398)
T ss_dssp             TTSCHHHHHHHHHHT-TCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHC-CcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            2456555 4567655 888853      12  677764 5778999999998875

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=85.46  E-value=0.17  Score=52.20  Aligned_cols=81  Identities=12%  Similarity=0.200  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC------------------HHHHHHHHHhCCeEEeCCCc-
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN------------------ATQVEKLIKEHSVYLTKDGR-  397 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~------------------~~~v~~Ll~e~~Vy~~p~gR-  397 (420)
                      +.+++.++++.+.+.|+++.....+....+..|+|.++-+.                  .++++.|+ +.||++.|++- 
T Consensus       357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~~  435 (465)
T 2yky_A          357 AASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGMY  435 (465)
Confidence            44566666666666665542111122234566777765322                  13445665 78999998652 


Q ss_pred             -EEEcccCCCCHHHHHHHHHHHh
Q psy16707        398 -ISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       398 -is~agl~~~ni~~la~AI~~vv  419 (420)
                       ++++ .++++|+.+.+++.+++
T Consensus       436 ~~s~~-~t~edid~~l~~l~~~l  457 (465)
T 2yky_A          436 ALSLE-IADAGRDAFAEALADFI  457 (465)
Confidence             6765 89999999999988875

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=85.08  E-value=2.6  Score=42.91  Aligned_cols=84  Identities=13%  Similarity=0.086  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHHHHHHHHHhcceEEcCC-----CceecccCC
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD-----GRISMAGVT  113 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~-----GRinvagl~  113 (420)
                      ..++.+.+++..+++.|.+.|++..   .+..+..+.|++++.  +.+.+++...-.+++|++...     -|+++..++
T Consensus       373 ~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~  449 (514)
T 3mad_A          373 EGYLDATRRILQAADRLKAGVRAIP---SLKILGDPLWVIAVASDELNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRH  449 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTST---TCEESSCCSSEEEEECSSSCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCC---CeEEeCCCeEEEEEeCCCCCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCC
Confidence            3466778899999999999998742   356666677888875  456666544334568887432     377777554


Q ss_pred             --cCCHHHHHHHHHhh
Q psy16707        114 --SKNVGYLAKAIHAN  127 (420)
Q Consensus       114 --~~ni~~va~ai~~v  127 (420)
                        ...|+.+.++|.++
T Consensus       450 ~~~e~i~~~l~~L~~~  465 (514)
T 3mad_A          450 TEPGVVDRFLADLQDA  465 (514)
T ss_dssp             GSTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence              46899999888776

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=84.31  E-value=3.6  Score=39.87  Aligned_cols=100  Identities=8%  Similarity=0.094  Sum_probs=59.8

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc---ccc-ceeecCCCHHH--
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTE-VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIG-MFCYTGLNATQ--   89 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~e-l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~---Q~G-mFs~~gL~~~q--   89 (420)
                      +||..+..-+..-|.     . ..++ ++.+++|...+++.|.+.|++.+.    ..+..   +.+ +..+..-.++-  
T Consensus       252 t~~~~~~~a~~aal~-----~-~~~~g~~~~~~~~~~l~~~l~~~l~~~g~----~~~~~~~~~~~~i~~~~~~~~~~~~  321 (379)
T 3ke3_A          252 TMPTDSLRQFRDAIL-----E-AKEIGFDILRDAQWELGNRVRKVLTDKGI----ESVAAEGFEAPGVVVSYTERDDMHK  321 (379)
T ss_dssp             CCCHHHHHHHHHHHH-----H-HHHHCHHHHHHHHHHHHHHHHHHHHHTTC----CBSBCTTCBCSSEEEEECSCHHHHS
T ss_pred             CCCHHHHHHHHHHHH-----H-HHHhcHHHHHHHHHHHHHHHHHHHHHcCC----EecCCccccCceEEEEccCCcchHH
Confidence            666665544433332     1 1223 788999999999999999988753    22221   122 33333322332  


Q ss_pred             HHHHHHhcceEEcCC-----------C--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         90 VEKLIKEHSVYLTKD-----------G--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        90 v~~L~~~~~IY~~~~-----------G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      .+.|. +++|++...           +  ||++.+ .+..+|++++++|.++
T Consensus       322 ~~~L~-~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~  372 (379)
T 3ke3_A          322 GSAFA-EAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKA  372 (379)
T ss_dssp             SHHHH-HTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHH
T ss_pred             HHHHH-HCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHH
Confidence            45664 568886532           2  455444 4668999999998875

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=84.12  E-value=0.65  Score=48.51  Aligned_cols=80  Identities=14%  Similarity=0.177  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCC---------------------HHHHHHHHHhcceEE
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---------------------ATQVEKLIKEHSVYL  101 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~---------------------~~qv~~L~~~~~IY~  101 (420)
                      ++.++++++..|..|.+.|. .    .|.....+.|||.+..+.                     .+.+.++-++++|.+
T Consensus       409 ~~~~r~~~~~r~~~l~~~L~-~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v  483 (546)
T 2zy4_A          409 KHTLKQLIRRRETTLYRELG-M----PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVL  483 (546)
T ss_dssp             HHHHHHHHHHHHHHHHGGGT-S----SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHHHhcC-C----CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEE
Confidence            44556677777777777773 2    244445688888655432                     244666778889988


Q ss_pred             cC-------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707        102 TK-------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       102 ~~-------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      .+       .|  |||++..+..+++.++++|.++
T Consensus       484 ~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~  518 (546)
T 2zy4_A          484 LPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKM  518 (546)
T ss_dssp             EESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHH
T ss_pred             eCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence            75       34  9999988999999999998876

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=83.94  E-value=3.1  Score=39.62  Aligned_cols=103  Identities=16%  Similarity=0.192  Sum_probs=62.1

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCC-cccc----ccccceeec-C--
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLT--EVKGMADRIISMRQSLKDNLQKEGSNKPW-NHIT----DQIGMFCYT-G--   84 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~--el~~m~~Ri~~~R~~l~~~L~~~~~~~~w-~~i~----~Q~GmFs~~-g--   84 (420)
                      ..+||..+...+..-|.     . ..+  .++.++++++.+|+.|.+.|++.+   .| ....    ...+++++. +  
T Consensus       237 ~~t~~~~~~~a~~~al~-----~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  307 (362)
T 2c0r_A          237 YNTPPSFGIYMVNEVLK-----W-IEERGGLEGVQQANRKKASLIYDAIDQSG---GFYRGCVDVDSRSDMNITFRLASE  307 (362)
T ss_dssp             SSCCCHHHHHHHHHHHH-----H-HHHTTHHHHHHHHHHHHHHHHHHHHHTST---TSSEESSCGGGBCSSEEEEECSCH
T ss_pred             CCCchHHHHHHHHHHHH-----H-HHHhCCHHHHHHHHHHHHHHHHHHHHHcC---CccccCCChHHcCCcEEEEEcCCc
Confidence            35677665555544442     1 123  378899999999999999998865   12 2211    123444442 1  


Q ss_pred             CCHHHH-HHHHHhcceEEcC----CC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         85 LNATQV-EKLIKEHSVYLTK----DG--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~~qv-~~L~~~~~IY~~~----~G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      .+.+++ +.| ++.+|.+.+    .|  ||++.. .+..++++++++|.++
T Consensus       308 ~~~~~~~~~L-~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  357 (362)
T 2c0r_A          308 ELEKEFVKAS-EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHF  357 (362)
T ss_dssp             HHHHHHHHHH-HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHH-HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            223344 455 566886643    12  677654 3578999999998775

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=83.86  E-value=1.7  Score=43.62  Aligned_cols=102  Identities=6%  Similarity=-0.076  Sum_probs=58.9

Q ss_pred             CCceeecccccccCCCCCCchHHHH-H-HHHH---HHccCCCCCCCC---CCCCHHHHHHHHHHHcCCCCccccCCceee
Q psy16707        160 VNKINLGVGAYRDDQGKPYVLPSVK-Q-ADEI---VLNKNLDKEYAP---IIGAPDFGKLAAQLAYGEDCPQLKDNLISI  231 (420)
Q Consensus       160 ~~kInL~iG~y~d~dg~~~~~~~V~-~-a~~~---~~~~~~~~~Y~p---~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~  231 (420)
                      ...+|+..|.|-.+=|  ...|.|. + |...   ...+ ..+ |.+   ..-..+|.+.+++++ +.    ...++|  
T Consensus        54 ~~ylD~~~~~~~~~lG--~~~p~v~~~~A~~~~~~~~~~-~~~-~~~~~~~~~~~~la~~la~~~-~~----~~~~~v--  122 (449)
T 2cjg_A           54 RRYLDMFTFVASSALG--MNPPALVDDREFHAELMQAAL-NKP-SNSDVYSVAMARFVETFARVL-GD----PALPHL--  122 (449)
T ss_dssp             CEEEESSHHHHTCSSC--BSCHHHHTCHHHHHHHHHHHT-CCC-CTTTCCCHHHHHHHHHHHHHH-CC----TTCCEE--
T ss_pred             cEEEEccCCccccCCC--CCCHHHHHHHHHHHHHHHHHh-cCC-CCcccCCHHHHHHHHHHHHhc-CC----CCCCEE--
Confidence            3467887776544445  2345555 4 5444   3322 222 332   222355666666655 21    123444  


Q ss_pred             ecccCCCCccccccccccceeecccchHHHHHHHHHHHhc-----------CCCCCEEEEcCCCCCCcHHHH
Q psy16707        232 VQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----------FPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----------~p~gd~VlvpdP~w~ny~~i~  292 (420)
                                          +.|.|||.|+..++.++..+           .|.+|.|++++|+|..+....
T Consensus       123 --------------------~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~  174 (449)
T 2cjg_A          123 --------------------FFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT  174 (449)
T ss_dssp             --------------------EEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG
T ss_pred             --------------------EEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccch
Confidence                                56999999999887643211           122789999999999877544

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=83.73  E-value=2.4  Score=42.36  Aligned_cols=108  Identities=17%  Similarity=0.134  Sum_probs=64.0

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------CCCcccccc----ccc-ee
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-------KPWNHITDQ----IGM-FC   81 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-------~~w~~i~~Q----~Gm-Fs   81 (420)
                      ..++||..+..-...-|.   +..+|  .++.+++++..++..|.+.|++.-.+       ..+..+..+    .|. ++
T Consensus       330 ~~gt~~~~~~~a~~aal~---~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~  404 (465)
T 3e9k_A          330 RISNPPILLVCSLHASLE---IFKQA--TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLT  404 (465)
T ss_dssp             CCSCCCHHHHHHHHHHHH---HHHHH--CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEE
T ss_pred             ccCCccHHHHHHHHHHHH---HHHHc--CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEE
Confidence            344677665544443332   22222  38899999999999999999874211       124444322    344 44


Q ss_pred             ec-CCC-HHHHHHHHHhcceEEcCC--C--ceec--ccCCcCCHHHHHHHHHhh
Q psy16707         82 YT-GLN-ATQVEKLIKEHSVYLTKD--G--RISM--AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        82 ~~-gL~-~~qv~~L~~~~~IY~~~~--G--Rinv--agl~~~ni~~va~ai~~v  127 (420)
                      +. +.. .+-.+.|. +++|.+...  +  ||++  ...+..+|+.++++|.++
T Consensus       405 ~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~  457 (465)
T 3e9k_A          405 ITFSVPNKDVFQELE-KRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSI  457 (465)
T ss_dssp             EEECCTTCCHHHHHH-TTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHH
T ss_pred             EEecCCHHHHHHHHH-HCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHH
Confidence            31 222 34456665 558876533  4  5555  334678899999999887

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=83.13  E-value=1.6  Score=44.10  Aligned_cols=39  Identities=21%  Similarity=0.093  Sum_probs=30.6

Q ss_pred             ecccchHHHHHHHHHHHhcCCCCCEEEEcC-CCCCCcHHHHhh
Q psy16707        253 QGISGTGSLRVGAAFLKNFFPGEKVIYVPT-PTWGNHIPICKH  294 (420)
Q Consensus       253 qt~gGtgal~~~~~~l~~~~p~gd~Vlvpd-P~w~ny~~i~~~  294 (420)
                      +..|||+|+..++..  .+.| ||+|++++ |+|+.+...+..
T Consensus        88 ~~~sGt~Ai~~al~a--l~~~-Gd~Vl~~~~~~y~~~~~~~~l  127 (431)
T 3ht4_A           88 QIISGTHAISTALFG--ILRP-GDELLYITGKPYDTLEEIVGV  127 (431)
T ss_dssp             TSCSHHHHHHHHHHT--TCCT-TCEEEECSSSCCTTHHHHTTS
T ss_pred             eeeCHHHHHHHHHHH--hCCC-CCEEEEeCCCCchhHHHHHhh
Confidence            355899999888753  3557 99999999 999999876643

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=82.76  E-value=1.6  Score=42.31  Aligned_cols=82  Identities=11%  Similarity=0.153  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--CCCHHHHHHHHHhcceEEcCC--Cceecc---cCCcCC
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--GLNATQVEKLIKEHSVYLTKD--GRISMA---GVTSKN  116 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--gL~~~qv~~L~~~~~IY~~~~--GRinva---gl~~~n  116 (420)
                      +.++++++.+|+.|.+.|++.+.+ .+.....+-+|+++.  +-..+-++.|. +++|++.+.  +.|-++   ..+..+
T Consensus       302 ~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~iRi~~~~~~~~~~  379 (392)
T 3ruy_A          302 EKLTERSLQLGEKLVGQLKEIDNP-MITEVRGKGLFIGIELNEPARPYCEQLK-AAGLLCKETHENVIRIAPPLVISEED  379 (392)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCT-TEEEEEEETTEEEEEESSCSHHHHHHHH-TTTEECCCBTTTEEEECCCTTCCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeeeEEEEEEcchHHHHHHHHH-HCCcEEecCCCCEEEEECCCCCCHHH
Confidence            577889999999999999877542 122222333344433  22344455665 789998765  445544   567789


Q ss_pred             HHHHHHHHHhh
Q psy16707        117 VGYLAKAIHAN  127 (420)
Q Consensus       117 i~~va~ai~~v  127 (420)
                      ++.++++|.++
T Consensus       380 i~~~~~~l~~~  390 (392)
T 3ruy_A          380 LEWAFQKIKAV  390 (392)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=82.73  E-value=0.88  Score=43.41  Aligned_cols=78  Identities=14%  Similarity=0.297  Sum_probs=54.1

Q ss_pred             HHHHHH--HHHHHHHHHHHHhcCCCCCCccccc---cccceeecCC-CHHHHHHHHHhcceEEcC-------CC------
Q psy16707         45 GMADRI--ISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTGL-NATQVEKLIKEHSVYLTK-------DG------  105 (420)
Q Consensus        45 ~m~~Ri--~~~R~~l~~~L~~~~~~~~w~~i~~---Q~GmFs~~gL-~~~qv~~L~~~~~IY~~~-------~G------  105 (420)
                      .+.+++  +.+|+.|.+.|++.+    |..+..   +.+|+++ -+ +.+++...-.+++|++.+       .|      
T Consensus       267 ~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~i  341 (371)
T 2e7j_A          267 RIKRWDEEVEKARRFAAEMEKLG----IKQLGDNPHNHDLMFF-HAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLT  341 (371)
T ss_dssp             HGGGHHHHHHHHHHHHHHHHHTT----CEEESSSSCCSSEEEE-ECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----cEEecCCCccCceEEE-ECCCHHHHHHHHHHCCEEEEeccccccccCCCCCce
Confidence            677888  899999999998762    444443   3455444 33 444444333477888754       13      


Q ss_pred             c-eeccc--CCcCCHHHHHHHHHhh
Q psy16707        106 R-ISMAG--VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 R-invag--l~~~ni~~va~ai~~v  127 (420)
                      | |+++.  .+.+++++++++|.++
T Consensus       342 Rii~~~~~~~~~~~i~~~~~~l~~~  366 (371)
T 2e7j_A          342 RYFKLSTYGLSDEEVDYVLNAFKEI  366 (371)
T ss_dssp             SEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEeeccCCCHHHHHHHHHHHHHH
Confidence            8 99987  6899999999999876

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=82.45  E-value=5  Score=39.38  Aligned_cols=84  Identities=12%  Similarity=0.119  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccc------cceeec------CCCHHHHHHHHHhcceEEcCCC---
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQI------GMFCYT------GLNATQVEKLIKEHSVYLTKDG---  105 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~------GmFs~~------gL~~~qv~~L~~~~~IY~~~~G---  105 (420)
                      +.++.+.+|...+++.|.+.|++.  + .|..+....      .+|++.      |.+.+++...-.+++|++....   
T Consensus       257 ~~~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~  333 (424)
T 2po3_A          257 DAFPEVIDRNRRNHAAYREHLADL--P-GVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPG  333 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCSC--T-TEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccC--C-CccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCc
Confidence            456677888888888888888653  2 244443211      344431      5677777666677899986521   


Q ss_pred             -------------------c-----eec---ccCCcCCHHHHHHHHHhh
Q psy16707        106 -------------------R-----ISM---AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 -------------------R-----inv---agl~~~ni~~va~ai~~v  127 (420)
                                         |     |++   ..++..++++++++|.++
T Consensus       334 ~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~  382 (424)
T 2po3_A          334 CHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC  382 (424)
T ss_dssp             GGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred             cccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence                               1     555   566788899999888876

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=81.97  E-value=1.2  Score=45.36  Aligned_cols=107  Identities=10%  Similarity=0.002  Sum_probs=66.4

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccC---CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeeccc
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN---LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGI  235 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~---~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~  235 (420)
                      +...||+..|.|-..=|  ...|.|.+|........   ....|.. ....++++++++.+.....+  ..++|      
T Consensus        62 G~~ylD~~~g~~~~~lG--h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~v------  130 (472)
T 1ohv_A           62 GNRMLDLYSQISSIPIG--YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQL------  130 (472)
T ss_dssp             SCEEEESSHHHHTCSSC--BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCEE------
T ss_pred             CCEEEECCCCHhhcccC--CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCEE------
Confidence            45689999887655556  34566666654432110   0112322 34678999998865332111  12344      


Q ss_pred             CCCCccccccccccceeecccchHHHHHHHHHHHhc-----------------------CCCC---CEEEEcCCCCCCcH
Q psy16707        236 SGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF-----------------------FPGE---KVIYVPTPTWGNHI  289 (420)
Q Consensus       236 ~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~-----------------------~p~g---d~VlvpdP~w~ny~  289 (420)
                                      +.+.|||.|...++.++..+                       .| |   +.|++.+|+|..+.
T Consensus       131 ----------------~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~-g~~r~~ii~~~~~yHg~~  193 (472)
T 1ohv_A          131 ----------------ITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAP-GCPDYSILSFMGAFHGRT  193 (472)
T ss_dssp             ----------------EEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTT-TSCCCEEEEETTCCCCSS
T ss_pred             ----------------EEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccc-cCCCCeEEEECCCccccc
Confidence                            56999999999888755321                       14 5   89999999999888


Q ss_pred             HHHh
Q psy16707        290 PICK  293 (420)
Q Consensus       290 ~i~~  293 (420)
                      ....
T Consensus       194 ~~~~  197 (472)
T 1ohv_A          194 MGCL  197 (472)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6653

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=81.47  E-value=7.9  Score=36.28  Aligned_cols=102  Identities=10%  Similarity=0.100  Sum_probs=63.3

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-----ccccceee--cCCC
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLT-EVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCY--TGLN   86 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~-el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~-----~Q~GmFs~--~gL~   86 (420)
                      +.+|+..+...+...|.      .+.+ .++.+.+++...|+.|.+.|++..  | +..+.     ...+++++  .+ +
T Consensus       241 ~~~~~~~~~~~~~~al~------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g-~~~~~~~~~~~~~~~~~~~~~~-~  310 (362)
T 3ffr_A          241 PETPNAMNIFLLGKVTG------DMLQISADGIRKQTEEKAALINTYIESSK--V-FSFGVEDAKLRSMTTIVANTTM-L  310 (362)
T ss_dssp             SSCCCHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHHHHHHHHHCS--S-EEESSSCGGGBCSSEEEEEESS-C
T ss_pred             CCCchHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHHHHHHHHHHcc--C-ceeccCChhhcCCceEEEecCC-C
Confidence            56666665544444432      1112 278899999999999999998751  1 22222     12344443  24 4


Q ss_pred             HHH-HHHHHHhcceEEcC------CC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         87 ATQ-VEKLIKEHSVYLTK------DG--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        87 ~~q-v~~L~~~~~IY~~~------~G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      .++ ++.|+++ +|.+.+      .+  ||++.. .+...|+.++++|.++
T Consensus       311 ~~~~~~~l~~~-gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  360 (362)
T 3ffr_A          311 PGEINKILEPF-DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK  360 (362)
T ss_dssp             HHHHHHHHGGG-TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            444 4567655 998863      22  677654 4678899999999876

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=80.05  E-value=1.9  Score=42.49  Aligned_cols=83  Identities=12%  Similarity=0.187  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH------------------HHHHHHHHhcceEEcCCC
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA------------------TQVEKLIKEHSVYLTKDG  105 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~------------------~qv~~L~~~~~IY~~~~G  105 (420)
                      +.+.++++.+++.|.+.|++......+.......|+|...-+.+                  +=++.|. +++|++.+.|
T Consensus       320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~  398 (424)
T 2e7u_A          320 PGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN  398 (424)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC
Confidence            44566677777777777765311011222234556665443321                  2334565 6899998655


Q ss_pred             --ceec-ccCCcCCHHHHHHHHHhh
Q psy16707        106 --RISM-AGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus       106 --Rinv-agl~~~ni~~va~ai~~v  127 (420)
                        |+.+ ...+..+++.++++|.++
T Consensus       399 ~~~~~~~~~~t~~~i~~~l~~l~~~  423 (424)
T 2e7u_A          399 FEAAFLSVAHREEDVEKTLEALRKA  423 (424)
T ss_dssp             SSCEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCceEeeccCCHHHHHHHHHHHHHh
Confidence              4433 346778899999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	420
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	1e-37
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	1e-33
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	3e-28
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	1e-36
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	1e-33
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	2e-24
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	3e-36
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	7e-34
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	4e-24
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	4e-36
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	2e-33
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	4e-29
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-35
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-33
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	8e-25
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	7e-34
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-31
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-27

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  138 bits (348), Expect = 1e-37
 Identities = 86/154 (55%), Positives = 102/154 (66%), Gaps = 1/154 (0%)

Query: 267 FLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKL 326
                  GE+          +     +     KILIR  YS+PP++GARI   IL  P+L
Sbjct: 249 AKNMGLYGERAGAFTVI-CRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPEL 307

Query: 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIK 386
           + +WL EVKGMADRIISMR  L  NL+KEGS+  W HITDQIGMFC+TGL   QVE+L K
Sbjct: 308 RKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTK 367

Query: 387 EHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK 420
           E S+Y+TKDGRIS+AGV S NVGYLA AIH VTK
Sbjct: 368 EFSIYMTKDGRISVAGVASSNVGYLAHAIHQVTK 401

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  127 bits (320), Expect = 1e-33
 Identities = 81/126 (64%), Positives = 95/126 (75%)

Query: 1   MLFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDN 60
               +  KILIR  YS+PP++GARI   IL  P+L+ +WL EVKGMADRIISMR  L  N
Sbjct: 273 KRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSN 332

Query: 61  LQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYL 120
           L+KEGS+  W HITDQIGMFC+TGL   QVE+L KE S+Y+TKDGRIS+AGV S NVGYL
Sbjct: 333 LKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYL 392

Query: 121 AKAIHA 126
           A AIH 
Sbjct: 393 AHAIHQ 398

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  112 bits (281), Expect = 3e-28
 Identities = 84/261 (32%), Positives = 124/261 (47%), Gaps = 24/261 (9%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           +TEAFK+DTN  K+NLGVGAYRDD GKPYVL  V++A+ ++  K +DKEY PI G  DF 
Sbjct: 18  VTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFT 77

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           + +A+LA GE+    K                      +   VQGISGTGSLRVGA FL+
Sbjct: 78  RASAELALGENSEAFKSG--------------------RYVTVQGISGTGSLRVGANFLQ 117

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKAQ 329
            FF   + +Y+P P+WGNH PI +  GL+    R +             E +     K+ 
Sbjct: 118 RFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSI 177

Query: 330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHS 389
            L  +   A     +    +   +     K  N +        Y G  +  + +      
Sbjct: 178 IL--LHACAHNPTGVDPRQEQWKELASVVKKRNLLA--YFDMAYQGFASGDINRDAWALR 233

Query: 390 VYLTKDGRISMAGVTSKNVGY 410
            ++ +   + ++   +KN+G 
Sbjct: 234 HFIEQGIDVVLSQSYAKNMGL 254

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  136 bits (342), Expect = 1e-36
 Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%)

Query: 269 KNFFPGEKV--IYVPTPTWGNHIPICKHTGLE-KILIRAFYSSPPIHGARIVQEILGDPK 325
                GE+V   ++       +  I      +   +IR+  S+PP +GA+IV ++L  P+
Sbjct: 255 NAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPE 314

Query: 326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLI 385
           L  QW  ++  M+ RI  MR +L+D+L K G+   W+HI +Q GMF +TGL    V++L 
Sbjct: 315 LTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLE 374

Query: 386 KEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAVTK 420
           + H+VYL   GR S+AG+   NV Y+AKAI  V +
Sbjct: 375 ETHAVYLVASGRASIAGLNQGNVEYVAKAIDEVVR 409

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  128 bits (321), Expect = 1e-33
 Identities = 52/119 (43%), Positives = 77/119 (64%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
             +IR+  S+PP +GA+IV ++L  P+L  QW  ++  M+ RI  MR +L+D+L K G+ 
Sbjct: 288 AKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTP 347

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             W+HI +Q GMF +TGL    V++L + H+VYL   GR S+AG+   NV Y+AKAI  
Sbjct: 348 GNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDE 406

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  102 bits (254), Expect = 2e-24
 Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 22/148 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLN-KNLDKEYAPIIGAPDF 208
           + + + +D    K++LG+GAYRDD GKP+VLPSVK A++++ N  + + EY  I G P  
Sbjct: 19  IKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSL 78

Query: 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFL 268
              AA++ +G     L+++                    ++  VQ +SGTG+L + A F 
Sbjct: 79  TSNAAKIIFGTQSDALQED--------------------RVISVQSLSGTGALHISAKFF 118

Query: 269 KNFFPGEKVIYVPTPTWGNHIPICKHTG 296
             FFP + V     PTW NH+ I ++ G
Sbjct: 119 SKFFPDKLVYL-SKPTWANHMAIFENQG 145

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  134 bits (338), Expect = 3e-36
 Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 1/152 (0%)

Query: 267 FLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKL 326
                   E+V         +   + +     K  IRA YS+PP HGA +V  IL +  L
Sbjct: 245 SKNFGLYNERVGACTLVAA-DSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL 303

Query: 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIK 386
           +A W  E+  M  RI  MRQ   + LQ++G+N+ ++ I  Q GMF ++GL   QV +L +
Sbjct: 304 RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLRE 363

Query: 387 EHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           E  VY    GR+++AG+T  N+  L +AI AV
Sbjct: 364 EFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV 395

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  128 bits (322), Expect = 7e-34
 Identities = 51/119 (42%), Positives = 73/119 (61%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K  IRA YS+PP HGA +V  IL +  L+A W  E+  M  RI  MRQ   + LQ++G+N
Sbjct: 276 KAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
           + ++ I  Q GMF ++GL   QV +L +E  VY    GR+++AG+T  N+  L +AI A
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVA 394

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (250), Expect = 4e-24
 Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L + F+ D    KINLG+G Y+D+ GK  VL SVK+A++ +L     K Y  I G P+FG
Sbjct: 16  LADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFG 75

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           +   +L +G+    + D      Q   GTG+LRV A F                      
Sbjct: 76  RCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFL--------------------- 114

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLEKI 300
                 K ++V  P+W NH  +    GLE  
Sbjct: 115 AKNTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  134 bits (338), Expect = 4e-36
 Identities = 67/153 (43%), Positives = 90/153 (58%), Gaps = 2/153 (1%)

Query: 269 KNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKLKA 328
                 E+V  +          I +     + ++R  +S+PP  GARIV   L DP+L  
Sbjct: 259 NFGLYNERVGNLTVVAK-EPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFH 317

Query: 329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEH 388
           +W   VK MADRI+SMR  L+  L+   +   WNHITDQIGMF +TGLN  QVE LI + 
Sbjct: 318 EWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQK 377

Query: 389 SVYLTKDGRISMAGVTSKNVGYLAKAIH-AVTK 420
            +YL   GRI+M G+T+KN+ Y+A +IH AVTK
Sbjct: 378 HIYLLPSGRINMCGLTTKNLDYVATSIHEAVTK 410

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  127 bits (319), Expect = 2e-33
 Identities = 60/119 (50%), Positives = 80/119 (67%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           + ++R  +S+PP  GARIV   L DP+L  +W   VK MADRI+SMR  L+  L+   + 
Sbjct: 288 QKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 347

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
             WNHITDQIGMF +TGLN  QVE LI +  +YL   GRI+M G+T+KN+ Y+A +IH 
Sbjct: 348 GTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHE 406

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  115 bits (288), Expect = 4e-29
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 17/158 (10%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVL-NKNLDKEYAPIIGAPDF 208
           L   F++D +  K+NLGVGAYR D  +P+VLP V++ ++ +  N +L+ EY PI+G  +F
Sbjct: 20  LIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEF 79

Query: 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFL 268
              A++LA G+D P L++  +  VQ + GTG+LR+GA F      G +            
Sbjct: 80  RTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKD--------- 130

Query: 269 KNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFY 306
                    +YV +PTW NH  +    G + I    ++
Sbjct: 131 -------TPVYVSSPTWENHNGVFTTAGFKDIRSYRYW 161

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  132 bits (331), Expect = 3e-35
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 1/152 (0%)

Query: 267 FLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILGDPKL 326
                   E+   +      +        G    L R  YS PP HGA+IV  +L  P+L
Sbjct: 242 SKNFGIYRERTGCLLAL-CADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPEL 300

Query: 327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIK 386
           +A W+ E++ +   ++ +R+ L   L+    +  +  + +  GMF   G    QV+++ +
Sbjct: 301 RADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKE 360

Query: 387 EHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           E  +Y+  D RI++AG+    +  LA+AI  V
Sbjct: 361 EFGIYMVGDSRINIAGLNDNTIPILARAIIEV 392

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  127 bits (319), Expect = 2e-33
 Identities = 39/125 (31%), Positives = 67/125 (53%)

Query: 2   LFHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNL 61
           L   A   L R  YS PP HGA+IV  +L  P+L+A W+ E++ +   ++ +R+ L   L
Sbjct: 267 LAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGEL 326

Query: 62  QKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLA 121
           +    +  +  + +  GMF   G    QV+++ +E  +Y+  D RI++AG+    +  LA
Sbjct: 327 RDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILA 386

Query: 122 KAIHA 126
           +AI  
Sbjct: 387 RAIIE 391

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  103 bits (256), Expect = 8e-25
 Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 24/149 (16%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG 209
           L   F+ D    KI+LGVG Y+D  G   ++ +V  A++ +L     K YA + G P+F 
Sbjct: 16  LMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQ 75

Query: 210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK 269
           K   +L  G+                          +   + +  + GTG+LR      +
Sbjct: 76  KAMGELILGDGLK-----------------------SETTATLATVGGTGALRQALELAR 112

Query: 270 NFFPGEKVIYVPTPTWGNHIPICKHTGLE 298
              P  +V  V  PTW NH+ I    GL 
Sbjct: 113 MANPDLRVF-VSDPTWPNHVSIMNFMGLP 140

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  128 bits (322), Expect = 7e-34
 Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 1/156 (0%)

Query: 263 VGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAFYSSPPIHGARIVQEILG 322
             +        GE+V  +      +     +  G  K  +R  YSSPP  GA++V  +L 
Sbjct: 242 SNSFSKIFSLYGERVGGLSVMCE-DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN 300

Query: 323 DPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVE 382
           D  LKA WL EV+ M  RI++MRQ L   L  E   + ++++ +Q GMF YTGL+A QV+
Sbjct: 301 DEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVD 360

Query: 383 KLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAV 418
           +L +E  VYL   GR+ +AG+ + NV  +AKA  AV
Sbjct: 361 RLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAV 396

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  121 bits (303), Expect = 3e-31
 Identities = 54/119 (45%), Positives = 76/119 (63%)

Query: 8   KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN 67
           K  +R  YSSPP  GA++V  +L D  LKA WL EV+ M  RI++MRQ L   L  E   
Sbjct: 277 KATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPE 336

Query: 68  KPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHA 126
           + ++++ +Q GMF YTGL+A QV++L +E  VYL   GR+ +AG+ + NV  +AKA  A
Sbjct: 337 RNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAA 395

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  110 bits (274), Expect = 2e-27
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 150 LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADE-IVLNKNLDKEYAPIIGAPDF 208
           L E FK+D   +K+NL +G Y ++ G    L +V +A+  +    +    Y P+ G   +
Sbjct: 16  LMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCY 75

Query: 209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFL 268
               A L +G D P LK                      +++ +Q + G+G+L+VGA FL
Sbjct: 76  RHAIAPLLFGADHPVLKQQ--------------------RVATIQTLGGSGALKVGADFL 115

Query: 269 KNFFPGEKVIYVPTPTWGNHIPICKHTGLEKILIRAF 305
           K +FP    ++V  PTW NH+ I    G E      +
Sbjct: 116 KRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWY 151

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	420
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.92
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.91
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.91
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.9
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.89
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.89
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.89
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.89
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.89
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.88
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.87
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.87
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.87
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.87
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.87
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.86
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.86
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.85
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.85
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.82
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.81
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.8
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.79
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.7
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.42
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.31
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.17
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	98.72
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	98.57
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	98.28
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	98.15
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	98.08
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	97.81
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	97.78
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	97.69
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	97.31
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	97.31
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	97.28
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	97.23
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	97.18
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	97.12
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	97.08
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	97.06
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	97.04
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	97.03
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	97.03
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	97.01
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	96.79
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	96.77
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	96.7
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	96.63
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	96.48
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	96.36
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	96.11
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	96.06
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	96.04
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	95.88
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	95.83
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	95.77
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	95.65
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	95.59
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	95.37
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	95.09
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	94.98
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	94.74
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	94.28
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	94.21
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	94.09
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	94.06
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	93.3
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	93.01
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	92.87
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	92.44
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	92.28
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	92.21
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	91.79
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	91.26
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	91.18
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	90.88
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	90.3
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	89.93
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	89.17
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	88.42
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	88.19
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	86.33
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	85.6
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	85.4
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	85.11
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	84.92
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	84.35
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	83.95
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	83.31
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	83.28
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	82.52
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	81.52

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=4.1e-50  Score=406.94  Aligned_cols=261  Identities=40%  Similarity=0.763  Sum_probs=245.6

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++.+++||||+++++|++|++++||||++|+|+|+||++|++++|++|++.+..+ ...|+|+|+.|+++||++++++++
T Consensus         8 ~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~   87 (412)
T d1yaaa_           8 IELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIF   87 (412)
T ss_dssp             CCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CCcCCCChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHHh
Confidence            7889999999999999999999999999999999999999999999999888755 457899999999999999999999


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      +.+++.+.++++.+                    +++.||++++.+++.++..+.| ||+|++|+|+|++|..+++.+|+
T Consensus        88 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~-gd~Vlip~P~~~~y~~~~~~~g~  146 (412)
T d1yaaa_          88 GTQSDALQEDRVIS--------------------VQSLSGTGALHISAKFFSKFFP-DKLVYLSKPTWANHMAIFENQGL  146 (412)
T ss_dssp             CTTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCTTHHHHHHTTTC
T ss_pred             cccCccccccceeE--------------------EecccchhHHHHHHHHHhccCC-CCEEecccccCchhHHHHHHcCC
Confidence            99988888888887                    8899999999888877777888 99999999999999999999998


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~  226 (412)
T d1yaaa_         147 KTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDL  226 (412)
T ss_dssp             CEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCH
T ss_pred             ceecccccccccccccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCc
Confidence            5                                                                               


Q ss_pred             -------------------------------------------------------------hhhhhhccCCCchHHHHHH
Q psy16707        299 -------------------------------------------------------------KILIRAFYSSPPIHGARIV  317 (420)
Q Consensus       299 -------------------------------------------------------------~~~~r~~~s~pp~~ga~iv  317 (420)
                                                                                   ....+++++|+|.++|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~  306 (412)
T d1yaaa_         227 DKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIV  306 (412)
T ss_dssp             HHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred             ccchhhhhhhhhccccCCCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Confidence                                                                         2334778999999999999


Q ss_pred             HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCc
Q psy16707        318 QEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGR  397 (420)
Q Consensus       318 ~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gR  397 (420)
                      ..+++|++++++|.++++.|+++|+++|+.|.+.|+++|.++.|.++++++|||+|++++++|+++|++|+|||++||+|
T Consensus       307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls~e~~~~L~~e~~V~~~~g~R  386 (412)
T d1yaaa_         307 AKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGR  386 (412)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSE
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEecCcCHHHHHHHHHhCCEEECCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCCCCHHHHHHHHHHHhC
Q psy16707        398 ISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       398 is~agl~~~ni~~la~AI~~vv~  420 (420)
                      ||+||++++||+++++||++|+|
T Consensus       387 is~~g~~~~~i~~l~~ai~~v~k  409 (412)
T d1yaaa_         387 ASIAGLNQGNVEYVAKAIDEVVR  409 (412)
T ss_dssp             EEGGGCCTTTHHHHHHHHHHHHH
T ss_pred             EEeccCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999985

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=9.4e-50  Score=403.07  Aligned_cols=261  Identities=43%  Similarity=0.776  Sum_probs=244.1

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++..++|+||.++++|++|++++|||||+|+|+|+||+++++++|++|++.+..+ ..+|+|+|+.|+|+||+|++++++
T Consensus         9 ~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~~~   88 (412)
T d1ajsa_           9 VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLAL   88 (412)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CCcCCCChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHHHh
Confidence            6788899999999999999999999999999999999999999999999888765 457899999999999999999999


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHh-----cCCCCCEEEEcCCCCCCcHHHH
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN-----FFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~-----~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +.++..++++++.+                    ++|.|+++++..+..++..     .+| ||+|++|+|+|++|..++
T Consensus        89 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l~~~~~~~~~p-Gd~Vlv~~P~y~~y~~~~  147 (412)
T d1ajsa_          89 GDDSPALQEKRVGG--------------------VQSLGGTGALRIGAEFLARWYNGTNNK-DTPVYVSSPTWENHNGVF  147 (412)
T ss_dssp             CTTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHSSSSSCC-CSCEEEEESCCTHHHHHH
T ss_pred             ccCCccccccccee--------------------ecccchhhHHHHHHHHHHHHhhhcCCC-CCEEEEeCCcchhhHHHH
Confidence            99998889999887                    8999999999888876644     467 999999999999999999


Q ss_pred             hhcCcc--------------------------------------------------------------------------
Q psy16707        293 KHTGLE--------------------------------------------------------------------------  298 (420)
Q Consensus       293 ~~aG~~--------------------------------------------------------------------------  298 (420)
                      +.+|++                                                                          
T Consensus       148 ~~~G~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~  227 (412)
T d1ajsa_         148 TTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG  227 (412)
T ss_dssp             HHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred             HHcCCeEEEeecccccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhh
Confidence            999985                                                                          


Q ss_pred             ------------------------------------------------------------hhhhhhccCCCchHHHHHHH
Q psy16707        299 ------------------------------------------------------------KILIRAFYSSPPIHGARIVQ  318 (420)
Q Consensus       299 ------------------------------------------------------------~~~~r~~~s~pp~~ga~iv~  318 (420)
                                                                                  ..+.+++++++|.++|.++.
T Consensus       228 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (412)
T d1ajsa_         228 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVA  307 (412)
T ss_dssp             TTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHH
T ss_pred             hhcCCcccchhhhhhhhhhcccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHH
Confidence                                                                        33457889999999999999


Q ss_pred             HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcE
Q psy16707        319 EILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRI  398 (420)
Q Consensus       319 ~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRi  398 (420)
                      .++.|+...++|.++++.|+++|+++|+.+.+.|+++|.++.|.++++++|||+|++++++++++|++|+|||++||+||
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls~~~v~~L~~e~gV~~vpg~Ri  387 (412)
T d1ajsa_         308 RTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRI  387 (412)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEE
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCCCHHHHHHHHHhCCEEEeCCCeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCCCCHHHHHHHHHHHhC
Q psy16707        399 SMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       399 s~agl~~~ni~~la~AI~~vv~  420 (420)
                      |+||+|++||+++++||++||+
T Consensus       388 ~~ag~~~~~i~~~a~aI~~av~  409 (412)
T d1ajsa_         388 NMCGLTTKNLDYVATSIHEAVT  409 (412)
T ss_dssp             EGGGCCTTTHHHHHHHHHHHHH
T ss_pred             EeccCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999974

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1.5e-49  Score=400.13  Aligned_cols=261  Identities=59%  Similarity=0.975  Sum_probs=242.4

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ++..++||||++.+.|++|++++|||||+|+|+|++|+++++++|++|+..+.+++..|+|+|+.|+++||+++++++++
T Consensus         7 ~~~~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~   86 (401)
T d7aata_           7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALG   86 (401)
T ss_dssp             CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhc
Confidence            56778999999999999999999999999999999999999999999999998877788999999999999999999999


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHH-hcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLK-NFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~-~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      .++..+.+++|++                    +++.+|+|++.....++. .+.| ||+|++|+|+|++|..+++.+|+
T Consensus        87 ~~~~~~~~~~i~~--------------------~~~~~~~g~~~~~~~~~~~l~~p-Gd~Vlv~~P~y~~y~~~~~~~g~  145 (401)
T d7aata_          87 ENSEAFKSGRYVT--------------------VQGISGTGSLRVGANFLQRFFKF-SRDVYLPKPSWGNHTPIFRDAGL  145 (401)
T ss_dssp             TTCHHHHTTCEEE--------------------EEEEHHHHHHHHHHHHHHHHCTT-CCEEEEEESCCTTHHHHHHHTTC
T ss_pred             cCCcccCcCceEE--------------------eccchHHHHHHHHHHhhHhhcCC-CceEEEecCCCcchhhHHHHcCC
Confidence            9988888998887                    778888888766654443 3567 99999999999999999999998


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~  225 (401)
T d7aata_         146 QLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDI  225 (401)
T ss_dssp             EEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred             eEEEEeccccccccccHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCc
Confidence            6                                                                               


Q ss_pred             ------------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                            ....++.++++|.++|.+++.+|.|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~  305 (401)
T d7aata_         226 NRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTP  305 (401)
T ss_dssp             HHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred             ccchhhhhhhhhhhcccceeEeccccceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCH
Confidence                                                                  23457889999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccC
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVT  404 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~  404 (420)
                      .+.++|.++++.++++|+++|+.+.+.|+++|.++.|.++++++|||+|++++++++++|++|+|||++||+|||+|++|
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~  385 (401)
T d7aata_         306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVA  385 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceECCCCeEEEecCCCHHHHHHHHHhCCEEECCCcEEEeccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhC
Q psy16707        405 SKNVGYLAKAIHAVTK  420 (420)
Q Consensus       405 ~~ni~~la~AI~~vv~  420 (420)
                      +++|+++++||++|||
T Consensus       386 ~~~i~~la~ai~~v~k  401 (401)
T d7aata_         386 SSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             TTTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999999999987

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=7.6e-50  Score=400.11  Aligned_cols=255  Identities=30%  Similarity=0.587  Sum_probs=235.1

Q ss_pred             cccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCC
Q psy16707        140 SSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGE  219 (420)
Q Consensus       140 ~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~  219 (420)
                      ...++||||+++++|++|++++||||+||+|+|+||+++++++|++|++.+.+++..|+|+|+.|+++||+++++++++.
T Consensus         6 ~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~   85 (394)
T d2ay1a_           6 KPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD   85 (394)
T ss_dssp             CCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG
T ss_pred             CCCCCChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhcc
Confidence            45568999999999999999999999999999999999999999999999987767889999999999999999999887


Q ss_pred             CCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-
Q psy16707        220 DCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-  298 (420)
Q Consensus       220 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-  298 (420)
                      +...   .....                    ++|+||+++..+++.++....| ||+|++|+|+|++|..+++.+|++ 
T Consensus        86 ~~~~---~~~~~--------------------~~~~~~~~~~~l~~~~~~~~~~-gd~V~~p~p~~~~y~~~~~~~g~~~  141 (394)
T d2ay1a_          86 GLKS---ETTAT--------------------LATVGGTGALRQALELARMANP-DLRVFVSDPTWPNHVSIMNFMGLPV  141 (394)
T ss_dssp             GCCG---GGEEE--------------------EEEEHHHHHHHHHHHHHHHHCT-TCCEEEEESCCHHHHHHHHHHTCCE
T ss_pred             cccc---ccccc--------------------eeccCchHHHHHHHHHhhhcCC-ceEEEEecccccchHHHHHHcCCEE
Confidence            6532   22222                    7899999998888877777788 999999999999999999999986 


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       142 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~  221 (394)
T d2ay1a_         142 QTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEED  221 (394)
T ss_dssp             EEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHH
T ss_pred             EEecccchhcccccchhHHHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhH
Q psy16707        299 ---------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLK  327 (420)
Q Consensus       299 ---------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~  327 (420)
                                                                         ....++.++++|.++|+++..++.++.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  301 (394)
T d2ay1a_         222 AAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELR  301 (394)
T ss_dssp             HHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHH
T ss_pred             chhhhhhhhhcccccccccccccccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHH
Confidence                                                               33457789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCCC
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKN  407 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~n  407 (420)
                      ++|.++++.|++|+.++|+.|.+.|+++|.++.|.++++|+|||+|++++++|+++|++|+|||++||+||||||+|++|
T Consensus       302 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~  381 (394)
T d2ay1a_         302 ADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNT  381 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeECCCceeEEecCcCHHHHHHHHHhCCEEecCCCEEEecCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH
Q psy16707        408 VGYLAKAIHAV  418 (420)
Q Consensus       408 i~~la~AI~~v  418 (420)
                      |+++|+||++|
T Consensus       382 i~~l~~ai~~v  392 (394)
T d2ay1a_         382 IPILARAIIEV  392 (394)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999997

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-49  Score=400.43  Aligned_cols=260  Identities=39%  Similarity=0.649  Sum_probs=227.0

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ++..++||||++.++|++|++++|||||+|+|+|+||++|++++|++|...+.+++..|+|+|+.|+++||+++++++++
T Consensus         5 ~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~   84 (396)
T d2q7wa1           5 ITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFG   84 (396)
T ss_dssp             CCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             cccCCCChHHHHHHHHhccCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHh
Confidence            66788999999999999999999999999999999999999999999999888777788999999999999999999999


Q ss_pred             CCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        219 EDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       219 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      .+++...++.+..                    ++|.||++++.++..++..+.| ||+|++|+|+|++|..+++.+|++
T Consensus        85 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~~~l~~~~~-gd~Vlvp~P~y~~y~~~~~~~g~~  143 (396)
T d2q7wa1          85 KGSALINDKRART--------------------AQTPGGTGALRVAADFLAKNTS-VKRVWVSNPSWPNHKSVFNSAGLE  143 (396)
T ss_dssp             TTCHHHHTTCEEE--------------------EEESHHHHHHHHHHHHHHHHSC-CCEEEEEESCCTHHHHHHHHTTCE
T ss_pred             hcCCcccccceee--------------------eccchHHHHHHHHHHHHhhccc-ceEEEEecCCCccchHHHHHcCCe
Confidence            9988888887776                    8899999999998887777788 999999999999999999999986


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~  223 (396)
T d2q7wa1         144 VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE  223 (396)
T ss_dssp             EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH
T ss_pred             eEecccccccccccccchHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCcc
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhh
Q psy16707        299 ----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKL  326 (420)
Q Consensus       299 ----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L  326 (420)
                                                                          ....++.++++|..+|.++..+++++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~  303 (396)
T d2q7wa1         224 DAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL  303 (396)
T ss_dssp             HTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHH
T ss_pred             CchHhhhhhhhcccccccccccccccccCCCccccccchhHHHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchh
Confidence                                                                2345788999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCCC
Q psy16707        327 KAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTSK  406 (420)
Q Consensus       327 ~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~~  406 (420)
                      ..+|+++++.|+++|+++|+.+.+.|+++|.++.|.++++++|||+|++++++++++|++|+|||++||||||+||+|++
T Consensus       304 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~  383 (396)
T d2q7wa1         304 RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPD  383 (396)
T ss_dssp             HHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecCCCeEEEeeCCCHHHHHHHHHhCCEEECCCCEEEecCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHh
Q psy16707        407 NVGYLAKAIHAVT  419 (420)
Q Consensus       407 ni~~la~AI~~vv  419 (420)
                      ||+++++||++||
T Consensus       384 ~i~~~~~ai~~v~  396 (396)
T d2q7wa1         384 NMAPLCEAIVAVL  396 (396)
T ss_dssp             THHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999986

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.5e-48  Score=389.67  Aligned_cols=260  Identities=39%  Similarity=0.650  Sum_probs=239.2

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHcc-CCCCCCCCCCCCHHHHHHHHHHHc
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK-NLDKEYAPIIGAPDFGKLAAQLAY  217 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~-~~~~~Y~p~~G~~~fr~a~~~~~~  217 (420)
                      ++..+.||||++.++|++|++++|||||+|+|+||+|++|++++|++|+..+..+ ...++|+|+.|+++||+++++++.
T Consensus         5 ~~~~~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~   84 (397)
T d3tata_           5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF   84 (397)
T ss_dssp             CCCCCCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHT
T ss_pred             CCCCCCCcHHHHHHHHhcCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHh
Confidence            5677899999999999999999999999999999999999999999998887654 457789999999999999999999


Q ss_pred             CCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCc
Q psy16707        218 GEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGL  297 (420)
Q Consensus       218 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~  297 (420)
                      +.++..+++++|.+                    +++.+++++..+.+.+...+.| ||+|++|+|+|++|..+++.+|+
T Consensus        85 ~~~~~~~~~~~i~~--------------------~~~~~~~~~~~l~~~~~~~~~p-gd~Vlv~~P~y~~y~~~~~~~G~  143 (397)
T d3tata_          85 GADHPVLKQQRVAT--------------------IQTLGGSGALKVGADFLKRYFP-ESGVWVSDPTWENHVAIFAGAGF  143 (397)
T ss_dssp             CSSCHHHHTTCEEE--------------------CCBSHHHHHHHHHHHHHHHHCS-SCCCEECSSCCTTHHHHHHTTTC
T ss_pred             hccCCcCCcCcEEE--------------------ecCchhHHHHHHHHHHhhhcCC-CCcceecccCccccHHHHHHcCC
Confidence            99988888888876                    6777777776666665566778 99999999999999999999998


Q ss_pred             c-------------------------------------------------------------------------------
Q psy16707        298 E-------------------------------------------------------------------------------  298 (420)
Q Consensus       298 ~-------------------------------------------------------------------------------  298 (420)
                      +                                                                               
T Consensus       144 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~  223 (397)
T d3tata_         144 EVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGME  223 (397)
T ss_dssp             CCEECCCCCTTTSSCCHHHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHH
T ss_pred             EEEEEecchhhccccchHHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCc
Confidence            6                                                                               


Q ss_pred             -----------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChh
Q psy16707        299 -----------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPK  325 (420)
Q Consensus       299 -----------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~  325 (420)
                                                                           ....+++++|+|.++|++++.++.+++
T Consensus       224 ~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~  303 (397)
T d3tata_         224 EDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEA  303 (397)
T ss_dssp             HHHHHHHHHHTTTCCCEECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHH
T ss_pred             ccchhhhhhhhcCCceEEEecCcccccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHH
Confidence                                                                 223477899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCCCcEEEcccCC
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKDGRISMAGVTS  405 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~gRis~agl~~  405 (420)
                      +..+|.++++.|++|++++|+.+.+.|++.+.++.|.++++++|||+|++++++++++|++|+|||++||+||||||+++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~  383 (397)
T d3tata_         304 LKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNT  383 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCCHHHHHHHTTTTCEECCSSSCCBTTSCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcCCCceEEecCcCHHHHHHHHHhCCEEeCCCCEEEeccCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      +||+++++||++||
T Consensus       384 ~~i~~~~~ai~~v~  397 (397)
T d3tata_         384 ANVQRVAKAFAAVM  397 (397)
T ss_dssp             TTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999986

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.92  E-value=1.3e-24  Score=216.80  Aligned_cols=246  Identities=13%  Similarity=0.131  Sum_probs=185.9

Q ss_pred             ccchhhhccccCCChHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        132 IRFQDARTSSVKVPSSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       132 ~~~~~~~~~~~~~d~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      |.|+++ +..+++++++.+.+.+++-  .+.++|||++|.   ||  +++++.|++|.....++ ..+.|.|..|.++||
T Consensus         1 m~~~~~-~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~---p~--~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lR   73 (388)
T d1j32a_           1 MKLAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGE---PD--FNTPKHIVEAAKAALEQ-GKTRYGPAAGEPRLR   73 (388)
T ss_dssp             CCCCHH-HHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHH
T ss_pred             CchhhH-hhcCCcCHHHHHHHHHHHHHHCCCCeEECCCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHH
Confidence            457777 8888888876665554433  246899999995   54  46778888888877654 678899999999999


Q ss_pred             HHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      +++++++...++..+++++|                      +.|.|+++++.+++..+  +.| ||+|++++|+|++|.
T Consensus        74 ~aia~~~~~~~g~~~~~~~i----------------------~it~G~~~al~~~~~~~--~~~-gd~Vlv~~P~y~~~~  128 (388)
T d1j32a_          74 EAIAQKLQRDNGLCYGADNI----------------------LVTNGGKQSIFNLMLAM--IEP-GDEVIIPAPFWVSYP  128 (388)
T ss_dssp             HHHHHHHHHHHCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEESSCCTHHH
T ss_pred             HHHHHHHHHhcccCCCCceE----------------------EEcCCHHHHHHHHHHHH--hCC-CCEEEEcCCCcHHHH
Confidence            99999985443333556655                      56999999999988755  568 999999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      .+++.+|++                                                                       
T Consensus       129 ~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~  208 (388)
T d1j32a_         129 EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI  208 (388)
T ss_dssp             HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred             HHHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcc
Confidence            999988775                                                                       


Q ss_pred             ---------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhH
Q psy16707        299 ---------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLK  327 (420)
Q Consensus       299 ---------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~  327 (420)
                                                                         ........++++..+|.++...+.+    
T Consensus       209 ~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~----  284 (388)
T d1j32a_         209 LYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN----  284 (388)
T ss_dssp             BCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS----
T ss_pred             cccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEEECHHHHHHHHHhhhhccccccHHHHHHHhhcccc----
Confidence                                                               1222334566777788766665533    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CH-HHHHHHHHhCCeEEeCC------
Q psy16707        328 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NA-TQVEKLIKEHSVYLTKD------  395 (420)
Q Consensus       328 ~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~-~~v~~Ll~e~~Vy~~p~------  395 (420)
                        +.+.++.++++++++|+.+.+.|++.+.   |....+++|+|.|+.+     ++ +++++|++++||++.||      
T Consensus       285 --~~~~~~~~~~~~~~~~~~~~~~l~~~~g---~~~~~p~gg~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~  359 (388)
T d1j32a_         285 --SQDCVQEMLAAFAERRRYMLDALNAMPG---LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGAD  359 (388)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHHHTCTT---CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCT
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHhCCC---CEecCCCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCC
Confidence              2355677779999999999999998732   7778889999999644     33 66789999999999996      


Q ss_pred             C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +  |||++ .+.++++...+.|++++
T Consensus       360 ~~~Rls~~-~~~e~l~~al~rl~~~l  384 (388)
T d1j32a_         360 DCIRLSYA-TDLDTIKRGMERLEKFL  384 (388)
T ss_dssp             TBEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEe-CCHHHHHHHHHHHHHHH
Confidence            1  99997 56676655555555543

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.91  E-value=4e-25  Score=219.79  Aligned_cols=125  Identities=31%  Similarity=0.630  Sum_probs=121.8

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      +.++....+..+++||.++++++..++.|+.|+++|.++++.|++|+..+|+.|.+.|++++++++|+|+..|.|||+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~  348 (394)
T d2ay1a_         269 QGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRL  348 (394)
T ss_dssp             HHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEEC
T ss_pred             hhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeECCCceeEEec
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhhC
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHANG  128 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v~  128 (420)
                      |||++||++|+++||||++++|||||||||++||+++|+||++||
T Consensus       349 ~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~i~~l~~ai~~v~  393 (394)
T d2ay1a_         349 GATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVG  393 (394)
T ss_dssp             CCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHT
T ss_pred             CcCHHHHHHHHHhCCEEecCCCEEEecCCCHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999997

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1.3e-23  Score=208.40  Aligned_cols=246  Identities=16%  Similarity=0.176  Sum_probs=188.9

Q ss_pred             cchhhhccccCCChHHHHHHHHHc--cCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFKK--DTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGK  210 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~~--d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~  210 (420)
                      .+|++ +.+++++++..+.+.+++  ..+.++|||++|.   +|  +++++.|++|...+.++ ..+.|.|+.|.++||+
T Consensus         3 ~~~~r-~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~---p~--~~~p~~i~~a~~~~~~~-~~~~Y~~~~G~~~lR~   75 (382)
T d1b5pa_           3 GLSRR-VQAMKPSATVAVNAKALELRRQGVDLVALTAGE---PD--FDTPEHVKEAARRALAQ-GKTKYAPPAGIPELRE   75 (382)
T ss_dssp             CCCHH-HHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHH
T ss_pred             HHHHH-HHhCCCCHHHHHHHHHHHHHhCCCCeEECCCCC---CC--CCCCHHHHHHHHHHHhc-CCcCCCCCCCCHHHHH
Confidence            36777 889999999988876543  2367899999996   54  57889999998887654 5689999999999999


Q ss_pred             HHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHH
Q psy16707        211 LAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIP  290 (420)
Q Consensus       211 a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~  290 (420)
                      ++++++....+..+++++|                      +.|.|+++++.+++..+  +.| ||.|++++|+|++|..
T Consensus        76 ~ia~~~~~~~~~~~~~~~i----------------------~it~G~~~al~~~~~~l--~~~-gd~vl~~~P~y~~~~~  130 (382)
T d1b5pa_          76 ALAEKFRRENGLSVTPEET----------------------IVTVGGSQALFNLFQAI--LDP-GDEVIVLSPYWVSYPE  130 (382)
T ss_dssp             HHHHHHHHTTCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHH
T ss_pred             HHHhhhhhhcccccccccc----------------------eecCCHHHHHHHHHHHh--CCC-CCEEEECCCCcHHHHH
Confidence            9999996555544566666                      56999999999988755  558 9999999999999999


Q ss_pred             HHhhcCcc------------------------------------------------------------------------
Q psy16707        291 ICKHTGLE------------------------------------------------------------------------  298 (420)
Q Consensus       291 i~~~aG~~------------------------------------------------------------------------  298 (420)
                      .++.+|.+                                                                        
T Consensus       131 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~  210 (382)
T d1b5pa_         131 MVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLL  210 (382)
T ss_dssp             HHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred             HHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEcccccee
Confidence            99999875                                                                        


Q ss_pred             ----------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHH
Q psy16707        299 ----------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLT  332 (420)
Q Consensus       299 ----------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~  332 (420)
                                                                    ..+......+++...+.++...+.+.   ..+..
T Consensus       211 ~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  287 (382)
T d1b5pa_         211 YEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQ---EASRA  287 (382)
T ss_dssp             SSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCH---HHHHH
T ss_pred             cCCCCCCHHHcCCCCEEEEecchhhccCcHhheEEEEECHHHHHHHHHHHHhcccCcccccccccccccccc---cchhH
Confidence                                                          12223445566777776666655443   33445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----CHHHHHHHHHhCCeEEeCC------C--cEE
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----NATQVEKLIKEHSVYLTKD------G--RIS  399 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----~~~~v~~Ll~e~~Vy~~p~------g--Ris  399 (420)
                      .++.+++.++++|+.+.+.+++.|    +.+..+++|+|.|+.+     +++++..++.++||.+.||      |  |||
T Consensus       288 ~~~~~~~~~~~~~~~~~~~l~~~g----~~~~~p~gg~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis  363 (382)
T d1b5pa_         288 FVEMAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLS  363 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEE
T ss_pred             HHHHHHHHHHhhhhHHHHHHhhcC----CeEecCCceEEEeEeCCCCCCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEE
Confidence            666777899999999999999988    6677889999999643     4566655567889999996      2  999


Q ss_pred             EcccCCCCHHHHHHHHHHH
Q psy16707        400 MAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       400 ~agl~~~ni~~la~AI~~v  418 (420)
                      ++ .++++++...+.|.++
T Consensus       364 ~~-~~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         364 YA-TSEENLRKALERFARV  381 (382)
T ss_dssp             CC-SCHHHHHHHHHHGGGG
T ss_pred             Ec-CCHHHHHHHHHHHHHh
Confidence            97 5666666666666554

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.90  E-value=7.1e-23  Score=202.45  Aligned_cols=243  Identities=17%  Similarity=0.178  Sum_probs=187.9

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAA  213 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~  213 (420)
                      +|++ ...++++.|..+.+...+  ++++|||++|.   +|  +++++.|+++.....++ ....|+|..|.++||++++
T Consensus         2 ~s~~-~~~~~~s~ir~~~~~~~~--~~dvi~l~~g~---p~--~~~p~~v~~~~~~a~~~-~~~~Y~~~~G~~~lr~aia   72 (388)
T d1gdea_           2 LSDR-LELVSASEIRKLFDIAAG--MKDVISLGIGE---PD--FDTPQHIKEYAKEALDK-GLTHYGPNIGLLELREAIA   72 (388)
T ss_dssp             HHHH-HHHSCCCHHHHHHHHHHH--CTTCEECCCCS---CC--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHH
T ss_pred             hhhh-hhhCCccHHHHHHHHHhC--CCCeEECCCCC---CC--CCCCHHHHHHHHHHHhc-CccCCCCCcCCHHHHHHHH
Confidence            4566 777888899988877654  46899999996   54  57788999888887754 5678999999999999999


Q ss_pred             HHHcCCCC-ccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        214 QLAYGEDC-PQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       214 ~~~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      +++...+. ....++.|                      +.|.|+++++.+++..+  +.| ||+|++++|+|++|...+
T Consensus        73 ~~~~~~~~~~~~~~~~i----------------------~~t~G~~~~l~~~~~~l--~~~-gd~vlv~~P~y~~~~~~~  127 (388)
T d1gdea_          73 EKLKKQNGIEADPKTEI----------------------MVLLGANQAFLMGLSAF--LKD-GEEVLIPTPAFVSYAPAV  127 (388)
T ss_dssp             HHHHHHHCCCCCTTTSE----------------------EEESSTTHHHHHHHTTT--CCT-TCEEEEEESCCTTHHHHH
T ss_pred             HHHHhhccccCCChhee----------------------eeccCcchHHHHHHHHh--cCC-CCEEEECCCCcHHHHHHH
Confidence            99832211 11223334                      66999999999987643  558 999999999999999999


Q ss_pred             hhcCcc--------------------------------------------------------------------------
Q psy16707        293 KHTGLE--------------------------------------------------------------------------  298 (420)
Q Consensus       293 ~~aG~~--------------------------------------------------------------------------  298 (420)
                      +.+|++                                                                          
T Consensus       128 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~  207 (388)
T d1gdea_         128 ILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYD  207 (388)
T ss_dssp             HHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT
T ss_pred             HHcCCEEEEeecccccCCCCCHHHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhc
Confidence            999886                                                                          


Q ss_pred             -----------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHH
Q psy16707        299 -----------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWL  331 (420)
Q Consensus       299 -----------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~  331 (420)
                                                                     .........+++...+.+++..|.+.    +|.
T Consensus       208 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~  283 (388)
T d1gdea_         208 DARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDE----RSW  283 (388)
T ss_dssp             TCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCH----HHH
T ss_pred             cCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeeccchhhhhhccccccccccccchhhHHHHHhhc----cch
Confidence                                                           22234455666788888787778763    556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecC-----CCH-HHHHHHHHhCCeEEeCC--------C-
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG-----LNA-TQVEKLIKEHSVYLTKD--------G-  396 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~-----l~~-~~v~~Ll~e~~Vy~~p~--------g-  396 (420)
                      +.++.++.+++++|+.+.+.|...+    +....+++|+|.|+.     .+. +++++|++++||.+.||        + 
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~fl~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~  359 (388)
T d1gdea_         284 KAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGY  359 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTB
T ss_pred             hHHHHHHHHHHHhhhhhhhhhhhcc----ccccCCCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEechhhCCCCCCE
Confidence            7788888999999999999999887    566788999999964     343 56788999999999985        2 


Q ss_pred             -cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        397 -RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       397 -Ris~agl~~~ni~~la~AI~~vv  419 (420)
                       |||++ .+.++++...+.|.+++
T Consensus       360 iRis~~-~~~e~l~~al~rL~~~l  382 (388)
T d1gdea_         360 VRISYA-TAYEKLEEAMDRMERVL  382 (388)
T ss_dssp             EEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             EEEEec-CCHHHHHHHHHHHHHHH
Confidence             99997 57777777777777665

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-23  Score=210.32  Aligned_cols=239  Identities=15%  Similarity=0.161  Sum_probs=185.6

Q ss_pred             hccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC-CCCCCCCCCCCHHHHHHHHHHH
Q psy16707        138 RTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN-LDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       138 ~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~-~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      |...++..|.....+..   .++++|||++|.   |+  .++++.|++|...+..+. ..+.|+|..|+++||+++++++
T Consensus         6 r~~~~~~~~~~~~~~~~---~~~dvI~l~~G~---p~--~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~   77 (418)
T d1w7la_           6 RLDGIDYNPWVEFVKLA---SEHDVVNLGQGF---PD--FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFF   77 (418)
T ss_dssp             GGTTCCCCTHHHHHHHH---HTSCCEECCCCS---CS--SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHh---CCCCCEECCCCC---CC--CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHH
Confidence            37788888888776654   345899999997   54  567889999888877542 3568999999999999999998


Q ss_pred             ---cCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        217 ---YGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       217 ---~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                         +|.+   +++ +.|                      +.|.|+++++.+++..+  +.| ||.|++|+|+|++|...+
T Consensus        78 ~~~~g~~---~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-g~~vlv~~p~~~~y~~~~  129 (418)
T d1w7la_          78 GELLGQE---IDPLRNV----------------------LVTVGGYGALFTAFQAL--VDE-GDEVIIIEPFFDCYEPMT  129 (418)
T ss_dssp             HHHHTCC---CCHHHHE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHH
T ss_pred             HHHhCCC---CCcccce----------------------eeccCcHHHHHHHHHhh--ccC-CceeeccccccchhHHHH
Confidence               4543   232 233                      67999999999998765  557 999999999999999999


Q ss_pred             hhcCcc--------------------------------------------------------------------------
Q psy16707        293 KHTGLE--------------------------------------------------------------------------  298 (420)
Q Consensus       293 ~~aG~~--------------------------------------------------------------------------  298 (420)
                      ...|++                                                                          
T Consensus       130 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~  209 (418)
T d1w7la_         130 MMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCIT  209 (418)
T ss_dssp             HHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHcCCEeeccccccccccccccccccCcccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchh
Confidence            988863                                                                          


Q ss_pred             ---------------------------------------------------------hhhhhhccCCCchHHHHHHHHHh
Q psy16707        299 ---------------------------------------------------------KILIRAFYSSPPIHGARIVQEIL  321 (420)
Q Consensus       299 ---------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL  321 (420)
                                                                               .........++|...+.++..+|
T Consensus       210 De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l  289 (418)
T d1w7la_         210 DEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESF  289 (418)
T ss_dssp             ECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred             hhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccccccchhhhhhhccccccccccccchhhHHHHHHh
Confidence                                                                     22224456677888888887777


Q ss_pred             CChh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------------------CHHHHH
Q psy16707        322 GDPK-LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------------------NATQVE  382 (420)
Q Consensus       322 ~dp~-L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------------------~~~~v~  382 (420)
                      .+.. ...++.+.++.++.+++++|+.+.+.|++.|    |....+++|+|.|+.+                  +.++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (418)
T d1w7la_         290 EREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVK  365 (418)
T ss_dssp             HHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTT----CEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHH
T ss_pred             hhccccccccccccccchhhhhhhhhhhhhhhhhcC----CcccCCCceeEEEEECcccccccchhccccccccHHHHHH
Confidence            5433 2344457788888999999999999999988    7778899999999643                  246789


Q ss_pred             HHHHhCCeEEeCC---------------CcEEEcccCCCCHHHHHHHHHH
Q psy16707        383 KLIKEHSVYLTKD---------------GRISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       383 ~Ll~e~~Vy~~p~---------------gRis~agl~~~ni~~la~AI~~  417 (420)
                      +|++++||.++||               -|||+| .++++++...++|++
T Consensus       366 ~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~-~~~~~l~~a~~rl~~  414 (418)
T d1w7la_         366 WMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV-KDEATLQAMDEKLRK  414 (418)
T ss_dssp             HHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC-CCHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEc-CCHHHHHHHHHHHHH
Confidence            9999999999885               199997 466666776666665

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.89  E-value=1.4e-23  Score=211.20  Aligned_cols=124  Identities=42%  Similarity=0.727  Sum_probs=120.2

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      ..++...+|.+|++||.++++++..+|+|+.++++|.++++.|+++++.+|..|++.|++.+.+++|+++..|.|||+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~  363 (412)
T d1yaaa_         284 TSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFT  363 (412)
T ss_dssp             HHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEEC
T ss_pred             HHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEec
Confidence            34566788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ||+++++++|+++||||++++||||+||+|++|||++++||++|
T Consensus       364 ~ls~e~~~~L~~e~~V~~~~g~Ris~~g~~~~~i~~l~~ai~~v  407 (412)
T d1yaaa_         364 GLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             CCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHhCCEEECCCCEEEeccCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999997

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.89  E-value=4.4e-23  Score=207.15  Aligned_cols=247  Identities=11%  Similarity=0.040  Sum_probs=181.0

Q ss_pred             cchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGK  210 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~  210 (420)
                      -|+++ +..+++.....+.+...+   +++|||++|.   ||.  ++++.|++|..++..+.  ..++|+|..|.++||+
T Consensus         3 ~~~~~-~~~~~~~~~~~~~~~~~~---~~~I~L~~G~---Pd~--~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lRe   73 (418)
T d2r5ea1           3 DLPKR-YQGSTKSVWVEYIQLAAQ---YKPLNLGQGF---PDY--HAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQ   73 (418)
T ss_dssp             CCCGG-GTTCCCCHHHHHHHHHHH---HCCEECSSSC---CSS--CCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHH
T ss_pred             chhhh-hcCCCCCHHHHHHHHhcC---CCCEEccCCC---CCC--CCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHH
Confidence            35566 777777777777766543   4789999996   654  66788888888876542  3568999999999999


Q ss_pred             HHHHHHcCCCCccccC-CceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        211 LAAQLAYGEDCPQLKD-NLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       211 a~~~~~~g~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      ++++++-...+..+.+ ++|                      +.|.|+++|+.+++..+  +.| ||.|++|+|+|++|.
T Consensus        74 aiA~~~~~~~g~~~~p~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~vlv~~P~y~~~~  128 (418)
T d2r5ea1          74 ALSKLYSQLVDRTINPMTEV----------------------LVTVGAYEALYATIQGH--VDE-GDEVIIIEPFFDCYE  128 (418)
T ss_dssp             HHHHHHHHHHTSCCCTTTSE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHH
T ss_pred             HHHHHHHHHhCCCCCccceE----------------------EEcCCCchhhhhhhhhc--ccc-ccceeccccccchhh
Confidence            9999984322222332 444                      67999999999998765  558 999999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      .++..+|.+                                                                       
T Consensus       129 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI  208 (418)
T d2r5ea1         129 PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCV  208 (418)
T ss_dssp             HHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             HHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeee
Confidence            999988764                                                                       


Q ss_pred             ----------------------------------------------------------hhhhhhccCCCchHHHHHHHHH
Q psy16707        299 ----------------------------------------------------------KILIRAFYSSPPIHGARIVQEI  320 (420)
Q Consensus       299 ----------------------------------------------------------~~~~r~~~s~pp~~ga~iv~~I  320 (420)
                                                                                ....+....++|...|.+++..
T Consensus       209 ~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~  288 (418)
T d2r5ea1         209 SDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVG  288 (418)
T ss_dssp             EECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHH
T ss_pred             cccchhhhccCCCccccccccccccceeeeeecCCccccCCCcccccccccchhhhhhhhcccccccccccchhhhcccc
Confidence                                                                      1112223345566677666554


Q ss_pred             hCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-----------------CHHHHH
Q psy16707        321 LGDP-KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-----------------NATQVE  382 (420)
Q Consensus       321 L~dp-~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-----------------~~~~v~  382 (420)
                      +.+. ...+...+.++.++++|+.+|+.+.+.|++.|    |....+++|||.|..+                 +.++++
T Consensus       289 l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (418)
T d2r5ea1         289 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTK  364 (418)
T ss_dssp             HHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHTT----CEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHH
T ss_pred             ccccccccccchhhHHHHHHHHHHhhhhHHhhHhhcC----CcccCCCceeEEEEEcccccccccchhcccccCHHHHHH
Confidence            4321 11122234566777999999999999999988    7778899999999532                 136789


Q ss_pred             HHHHhCCeEEeCC-------------C--cEEEcccCCCCHHHHHHHHHHH
Q psy16707        383 KLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAV  418 (420)
Q Consensus       383 ~Ll~e~~Vy~~p~-------------g--Ris~agl~~~ni~~la~AI~~v  418 (420)
                      .|++++||.++||             +  |||++ .++++++...+.|++.
T Consensus       365 ~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~-~~~e~l~~a~~rl~~~  414 (418)
T d2r5ea1         365 WMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF-KKDENLQKAAEILRKW  414 (418)
T ss_dssp             HHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEEeCchhhCCCCCccCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence            9999999999996             2  99997 4777777777777664

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=9.2e-23  Score=202.50  Aligned_cols=238  Identities=15%  Similarity=0.089  Sum_probs=174.1

Q ss_pred             cccchhhhccccCCChHHH-HHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHH
Q psy16707        131 PIRFQDARTSSVKVPSSNL-LTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFG  209 (420)
Q Consensus       131 p~~~~~~~~~~~~~d~i~~-l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr  209 (420)
                      |+.++++ .+.+.. ++|. +.+.+++   ++.|||++|.   ||  +++++.+++|......+ ..++|.|..|+++||
T Consensus         1 ~~~~~~~-~~~~~~-~~~~~~~~~a~~---~~~i~l~~G~---Pd--~~~p~~i~~a~~~~~~~-~~~~Y~~~~G~~~LR   69 (382)
T d1u08a_           1 PLIPQSK-LPQLGT-TIFTQMSALAQQ---HQAINLSQGF---PD--FDGPRYLQERLAHHVAQ-GANQYAPMTGVQALR   69 (382)
T ss_dssp             CCCCCCS-CCCCCC-CHHHHHHHHHHH---TTCEECCCSS---CS--SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHH
T ss_pred             CCCchhh-CCCCCC-cHHHHHHHHhcc---CCCEEccCCC---CC--CCCCHHHHHHHHHHHhc-CCCCCCCCcCCHHHH
Confidence            3444444 444444 4443 4444432   4889999997   54  56788999988777654 678999999999999


Q ss_pred             HHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        210 KLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       210 ~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      +++++++....+..+.+++                     +|+.|.|+++++.+++..+  +.+ ||.|++++|+|++|.
T Consensus        70 eaia~~~~~~~g~~~~~~~---------------------~I~vt~G~~~al~~~~~~l--~~~-gd~vl~~~p~y~~~~  125 (382)
T d1u08a_          70 EAIAQKTERLYGYQPDADS---------------------DITVTAGATEALYAAITAL--VRN-GDEVICFDPSYDSYA  125 (382)
T ss_dssp             HHHHHHHHHHHSCCCCTTT---------------------TEEEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHH
T ss_pred             HHHHHHHHHHhCCCCCCCc---------------------eEEeccchHHHHHHHHhhc--ccc-cceEEEecccccchh
Confidence            9999998432222233332                     1367999999999998755  457 999999999999999


Q ss_pred             HHHhhcCcc-----------------------------------------------------------------------
Q psy16707        290 PICKHTGLE-----------------------------------------------------------------------  298 (420)
Q Consensus       290 ~i~~~aG~~-----------------------------------------------------------------------  298 (420)
                      ..+...|..                                                                       
T Consensus       126 ~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~  205 (382)
T d1u08a_         126 PAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHIN  205 (382)
T ss_dssp             HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCB
T ss_pred             hhhhhccccceecccccccccCCHHHHhhhhccCccEEEECCCCcccccccccccchhhhhhhccccceeeeecchhhcc
Confidence            999999874                                                                       


Q ss_pred             -------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHH
Q psy16707        299 -------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQ  329 (420)
Q Consensus       299 -------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~  329 (420)
                                                                       .........++|...|.+++.+|.++     
T Consensus       206 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-----  280 (382)
T d1u08a_         206 FSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE-----  280 (382)
T ss_dssp             CCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-----
T ss_pred             ccccccccccccccccCcEEEEeeccccccCCcccchhhhccchhHHHHHhhhcccccccccccccccccccccc-----
Confidence                                                             22223345677888888888777533     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC------C-HHHHHHHHHhCCeEEeCC-------
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-ATQVEKLIKEHSVYLTKD-------  395 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l------~-~~~v~~Ll~e~~Vy~~p~-------  395 (420)
                       .+.++.++++|+++|+.+.+.++..|    |....+++|||.|+.+      + .+++++|++++||.++||       
T Consensus       281 -~~~~~~~~~~~~~~~~~l~~~~~~~g----~~~~~p~gg~~~~~~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~  355 (382)
T d1u08a_         281 -PEHYLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADP  355 (382)
T ss_dssp             -THHHHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSC
T ss_pred             -hHHHHHHHHHHHhhhhhhhhhhccCC----cEEecCCceEEEEEecCCCCCCCHHHHHHHHHHHCCEEEEcchhhCCCC
Confidence             24456677999999999999988777    6778899999999532      3 467899999999999985       


Q ss_pred             -C----cEEEcccCCCCHHHHHHHHHH
Q psy16707        396 -G----RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       396 -g----Ris~agl~~~ni~~la~AI~~  417 (420)
                       +    |||++ .++   +.+.+|+++
T Consensus       356 ~~~~~~Ris~~-~~~---e~l~~al~R  378 (382)
T d1u08a_         356 FPHKLIRLCFA-KKE---STLLAAAER  378 (382)
T ss_dssp             CCSCEEEEECC-SCH---HHHHHHHHH
T ss_pred             CCCCEEEEEEe-CCH---HHHHHHHHH
Confidence             2    99997 344   555556554

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.4e-23  Score=207.43  Aligned_cols=124  Identities=41%  Similarity=0.659  Sum_probs=118.8

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      +.++....|..|+++|..++.++..+++++.+..+|.++++.|++|++.+|..|.+.|++++++++|+|+..|.|||+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~  351 (396)
T d2q7wa1         272 FSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFS  351 (396)
T ss_dssp             HHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEEC
T ss_pred             hhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecCCCeEEEee
Confidence            34556678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ||+++++++|++|||||++++||||+||||++||+++|+||++|
T Consensus       352 ~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~~i~~~~~ai~~v  395 (396)
T d2q7wa1         352 GLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             CCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCEEECCCCEEEecCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999987

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.88  E-value=2.9e-22  Score=200.31  Aligned_cols=234  Identities=14%  Similarity=0.169  Sum_probs=167.2

Q ss_pred             cCCChHHHHHHHHHccCCC-CceeecccccccCCCC--CCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcC
Q psy16707        142 VKVPSSNLLTEAFKKDTNV-NKINLGVGAYRDDQGK--PYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYG  218 (420)
Q Consensus       142 ~~~d~i~~l~~~~~~d~~~-~kInL~iG~y~d~dg~--~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g  218 (420)
                      ...+|+..+.+.++..+.+ ++|||++|.   ||..  +++.+.+.++.....+....++|+|..|+++||+++++++-.
T Consensus        11 ~~~~pir~~~~~~~~~~~~~~vI~L~~G~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~   87 (412)
T d1bw0a_          11 LVFNPIRTVSDNAKPSPSPKPIIKLSVGD---PTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRN   87 (412)
T ss_dssp             TCCCHHHHHHHTCCCCCSCSCCEECCCCC---TTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHhcCCCCCCCCcEECcCCC---CCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            4467888888888776665 579999996   5532  345567777766655555678999999999999999999833


Q ss_pred             CC------CccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHH
Q psy16707        219 ED------CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPIC  292 (420)
Q Consensus       219 ~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~  292 (420)
                      .+      ...+++++|                      +.|.|+++|+.+++..+  +.| ||+|++++|+|++|..++
T Consensus        88 ~~~~~~~~~~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-Gd~Vlv~~P~y~~~~~~~  142 (412)
T d1bw0a_          88 SFVHKEELKSTIVKDNV----------------------VLCSGGSHGILMAITAI--CDA-GDYALVPQPGFPHYETVC  142 (412)
T ss_dssp             HHCCSTTTGGGCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHHH
T ss_pred             hcCcccccCCCCCCCeE----------------------EEecccccchhhhhhhh--hcc-ccceeeeeccchhhhhhh
Confidence            21      112334444                      77999999999988755  568 999999999999999999


Q ss_pred             hhcCcc--------------------------------------------------------------------------
Q psy16707        293 KHTGLE--------------------------------------------------------------------------  298 (420)
Q Consensus       293 ~~aG~~--------------------------------------------------------------------------  298 (420)
                      +.+|++                                                                          
T Consensus       143 ~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~  222 (412)
T d1bw0a_         143 KAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFK  222 (412)
T ss_dssp             HHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCC
T ss_pred             hccCccccccccccccccchhhHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccC
Confidence            999986                                                                          


Q ss_pred             -------------------------------------------------hh------hhhhccCCCchHHHHHHHHHhCC
Q psy16707        299 -------------------------------------------------KI------LIRAFYSSPPIHGARIVQEILGD  323 (420)
Q Consensus       299 -------------------------------------------------~~------~~r~~~s~pp~~ga~iv~~IL~d  323 (420)
                                                                       ..      ......++++...+..+...+. 
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  301 (412)
T d1bw0a_         223 GKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALL-  301 (412)
T ss_dssp             SSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH-
T ss_pred             CCCCccccccccccccccccccccccCccCccCCCCcccccccchhhcchhhhhhhccccccccCCchhhhhhcccccc-
Confidence                                                             00      0122223334444443333221 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcccCCCCceEEecCC----------CHHHHHHHHHhCCeEE
Q psy16707        324 PKLKAQWLTEVKGMADRIISMRQSLKDNLQKE-GSNKPWNHITDQIGMFCYTGL----------NATQVEKLIKEHSVYL  392 (420)
Q Consensus       324 p~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~-g~~~~w~~i~~q~GmF~~~~l----------~~~~v~~Ll~e~~Vy~  392 (420)
                          ..++++++.++++++++|+.+.+.|.+. |    |.+..+++|||.|..+          +.+++++|++++||++
T Consensus       302 ----~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g----~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v  373 (412)
T d1bw0a_         302 ----NTPQEHLDQIVAKIEESAMYLYNHIGECIG----LAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQV  373 (412)
T ss_dssp             ----SSCHHHHHHHHHHHHHHHHHHHHHHTTSTT----EEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEEC
T ss_pred             ----cccccccccccchhHHHHHHHHHHHHHhcC----ceecCCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEE
Confidence                2234567777799999999999999764 4    7778899999998532          2477899999999999


Q ss_pred             eCC------C--cEEEcccCCCCHHHHHHHHH
Q psy16707        393 TKD------G--RISMAGVTSKNVGYLAKAIH  416 (420)
Q Consensus       393 ~p~------g--Ris~agl~~~ni~~la~AI~  416 (420)
                      +||      |  |||+| .++   +.+.+|++
T Consensus       374 ~PG~~Fg~~g~iRis~~-~~~---e~l~eal~  401 (412)
T d1bw0a_         374 LPGTIFHAPGFTRLTTT-RPV---EVYREAVE  401 (412)
T ss_dssp             EEGGGGTCTTEEEEECC-SCH---HHHHHHHH
T ss_pred             EeccccCCCCeEEEEEc-CCH---HHHHHHHH
Confidence            996      2  99997 344   44444443

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=4.5e-22  Score=195.97  Aligned_cols=236  Identities=17%  Similarity=0.142  Sum_probs=174.6

Q ss_pred             ccccCCChHHHHHHHHHccC--CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKDT--NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~--~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      ...++...++.+.+.+++..  +.++|||++|.   |+  +++++.|+++......+ ..+.|+|..|.++||+++++++
T Consensus         5 ~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~---p~--~~~p~~i~~~~~~~~~~-~~~~Y~~~~G~~~lR~aia~~~   78 (375)
T d1o4sa_           5 ISEIPISKTMELDAKAKALIKKGEDVINLTAGE---PD--FPTPEPVVEEAVRFLQK-GEVKYTDPRGIYELREGIAKRI   78 (375)
T ss_dssp             HHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSS---CS--SCCCHHHHHHHHHHHTT-CCCCCCCTTCCHHHHHHHHHHH
T ss_pred             hhhCCCCHHHHHHHHHHHHHHCCCCeEECCCcC---CC--CCCCHHHHHHHHHHHhc-CCcCCCCCcCCHHHHHHHHhhh
Confidence            66777777777766665443  56799999995   54  46678888888777654 5678999999999999999998


Q ss_pred             cCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        217 YGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       217 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                      ....+..+++++|                      +.|.||++|+.+++..|  +.| ||.|++++|+|++|...+...|
T Consensus        79 ~~~~~~~~~~~~i----------------------~~t~G~~~al~~~~~~l--~~~-gd~vlv~~P~y~~~~~~~~~~~  133 (375)
T d1o4sa_          79 GERYKKDISPDQV----------------------VVTNGAKQALFNAFMAL--LDP-GDEVIVFSPVWVSYIPQIILAG  133 (375)
T ss_dssp             HHHHTCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHHHHHTT
T ss_pred             hhccccccccccc----------------------cccCcHHHHHHHHHHHH--hCC-CCEEEEccCccccchhhhhccc
Confidence            5333333455555                      66999999999988755  458 9999999999999999998887


Q ss_pred             cc------------------------------------------------------------------------------
Q psy16707        297 LE------------------------------------------------------------------------------  298 (420)
Q Consensus       297 ~~------------------------------------------------------------------------------  298 (420)
                      ..                                                                              
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~  213 (375)
T d1o4sa_         134 GTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFT  213 (375)
T ss_dssp             CEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCC
T ss_pred             cccccccccccccccchhHHHHHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhcccccccccc
Confidence            64                                                                              


Q ss_pred             -----------------------------------------hhhhh-hccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q psy16707        299 -----------------------------------------KILIR-AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKG  336 (420)
Q Consensus       299 -----------------------------------------~~~~r-~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~  336 (420)
                                                               ....+ ....+++...+......+         .+....
T Consensus       214 ~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  284 (375)
T d1o4sa_         214 SILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKAL---------EVDNSY  284 (375)
T ss_dssp             CHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHT---------TCCCHH
T ss_pred             ccccccCCCCCEEEEeechhhccCCccccccccccccchhhhhhhhccccccccccchhhhhhhc---------ccchhh
Confidence                                                     11112 222334444444333322         223334


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC------C--cEEEcccCC
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD------G--RISMAGVTS  405 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~------g--Ris~agl~~  405 (420)
                      +.++++++|+.+.+.|++.|    |....+++|||.|+.++   .+++.+|++++||++.||      |  |||++ .++
T Consensus       285 ~~~~~~~r~~~~~~~l~~~g----~~~~~p~gg~f~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~-~~~  359 (375)
T d1o4sa_         285 MVQTFKERKNFVVERLKKMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA-TSI  359 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC-SCH
T ss_pred             hHHHHHHHHHHHHHHHHhcC----ceEecCCccEEEEEECCCCHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEc-CCH
Confidence            55789999999999999988    77788899999997553   577899999999999985      2  99997 577


Q ss_pred             CCHHHHHHHHHHHh
Q psy16707        406 KNVGYLAKAIHAVT  419 (420)
Q Consensus       406 ~ni~~la~AI~~vv  419 (420)
                      ++++...+.|++++
T Consensus       360 e~l~~al~rl~~~l  373 (375)
T d1o4sa_         360 ERLTEALDRIEDFL  373 (375)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            77777777777765

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.87  E-value=1.7e-22  Score=201.90  Aligned_cols=245  Identities=14%  Similarity=0.145  Sum_probs=171.3

Q ss_pred             cchhhhccccCCChHHHHH---HHHHccCCCCceeecccccccCC-CCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHH
Q psy16707        133 RFQDARTSSVKVPSSNLLT---EAFKKDTNVNKINLGVGAYRDDQ-GKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDF  208 (420)
Q Consensus       133 ~~~~~~~~~~~~d~i~~l~---~~~~~d~~~~kInL~iG~y~d~d-g~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~f  208 (420)
                      .+|.+ ...++ ..|..+.   ...++ .+.++|||++|.   |. .++++++.|++|.....++ ..+.|+|..|.++|
T Consensus         3 ~~s~r-~~~~~-~~ir~i~~~a~~l~~-~G~~vi~l~~G~---P~~~df~~p~~i~~a~~~a~~~-~~~~Y~~~~G~~~L   75 (395)
T d1xi9a_           3 RASKR-ALSVE-YAIRDVVLPARELEK-KGIKVIRLNIGD---PVKFDFQPPEHMKEAYCKAIKE-GHNYYGDSEGLPEL   75 (395)
T ss_dssp             CCCHH-HHTCC-C-------CHHHHHH-TTCCCEECCCCC---GGGTTCCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHH
T ss_pred             cchhc-cccCc-HHHHHHHHHHHHHHH-CCCCeEECCCCC---CCCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHH
Confidence            44555 55553 3355443   33333 367899999995   42 2467888999998887764 56789999999999


Q ss_pred             HHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCc
Q psy16707        209 GKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNH  288 (420)
Q Consensus       209 r~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny  288 (420)
                      |+++++++....+..++++.|                      +.|.|+++++.+.+..+  +.| ||.|++++|+|++|
T Consensus        76 R~aia~~~~~~~g~~~~~~~i----------------------~i~~G~~~~~~~~~~~~--~~~-Gd~vlv~~P~y~~~  130 (395)
T d1xi9a_          76 RKAIVEREKRKNGVDITPDDV----------------------RVTAAVTEALQLIFGAL--LDP-GDEILVPGPSYPPY  130 (395)
T ss_dssp             HHHHHHHHHHHHCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHH
T ss_pred             HHHHHHhhhhccccccccccc----------------------ccccccchhhhhhhhhh--cCC-CCEEEEcCCccccc
Confidence            999999984333322445555                      56999999999988654  557 99999999999999


Q ss_pred             HHHHhhcCcc----------------------------------------------------------------------
Q psy16707        289 IPICKHTGLE----------------------------------------------------------------------  298 (420)
Q Consensus       289 ~~i~~~aG~~----------------------------------------------------------------------  298 (420)
                      ...++.+|++                                                                      
T Consensus       131 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~  210 (395)
T d1xi9a_         131 TGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDL  210 (395)
T ss_dssp             HHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT
T ss_pred             hhhhhhcCCEEEEEeccccccccchHHHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccc
Confidence            9999999985                                                                      


Q ss_pred             ------------------------------------------------hhh------hhhccCCCchHHHHHHHHHhCCh
Q psy16707        299 ------------------------------------------------KIL------IRAFYSSPPIHGARIVQEILGDP  324 (420)
Q Consensus       299 ------------------------------------------------~~~------~r~~~s~pp~~ga~iv~~IL~dp  324 (420)
                                                                      ..+      .....++++..+|.++...|.++
T Consensus       211 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~  290 (395)
T d1xi9a_         211 MTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP  290 (395)
T ss_dssp             CBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC
T ss_pred             ccccccccchhhcCCCCCEEEEeCcchhcccchhhcEeeEecCHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCC
Confidence                                                            000      01223456777777666666543


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC-------CHHHHHHHHHhCCeEEeCC--
Q psy16707        325 KLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL-------NATQVEKLIKEHSVYLTKD--  395 (420)
Q Consensus       325 ~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l-------~~~~v~~Ll~e~~Vy~~p~--  395 (420)
                         .+|   ++++++.|+++|+.+.+.|++.+.   +....+++|+|.|+.+       +.+++++|++++||++.||  
T Consensus       291 ---~~~---~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~  361 (395)
T d1xi9a_         291 ---MDY---LKEYMKKLKERRDYIYKRLNEIPG---ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSG  361 (395)
T ss_dssp             ---CHH---HHHHHHHHHHHHHHHHHHHHTSTT---EECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGG
T ss_pred             ---HHH---HHHHHHHHHHHHHHHHHHHHhCCC---ceecCCCeeEEEeEECCCCCCCCHHHHHHHHHHhCCEEEEcChh
Confidence               344   455558999999999999998762   3456678899998532       2467889999999999985  


Q ss_pred             ------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 ------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 ------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                            +  |||++ .+.++++.-.+.|.+++
T Consensus       362 Fg~~~~~~~Ris~~-~~~e~l~eal~rl~~~l  392 (395)
T d1xi9a_         362 FGEYGAGHFRAVFL-PPIEILEEAMDRFEKFM  392 (395)
T ss_dssp             GCGGGTTBEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEEEec-CCHHHHHHHHHHHHHHH
Confidence                  2  99997 45665555555555443

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=7e-22  Score=194.15  Aligned_cols=237  Identities=19%  Similarity=0.165  Sum_probs=176.0

Q ss_pred             ccchhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        132 IRFQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       132 ~~~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      |.++++ ...+++..+-.+.+.++.   .+.|||++|.   ||  .++++.+++|......  ..+.|+|..|.++||++
T Consensus         1 ~~~~~~-~~~~~~~~~~~~~~la~~---~~~I~ls~g~---p~--~~~p~~i~~al~~~l~--~~~~Y~~~~G~~elr~a   69 (368)
T d1v2da_           1 MRLHPR-TEAAKESIFPRMSGLAQR---LGAVNLGQGF---PS--NPPPPFLLEAVRRALG--RQDQYAPPAGLPALREA   69 (368)
T ss_dssp             CCCCGG-GGGC---CHHHHHHHHHH---HTCEECCCCS---CS--SCCCHHHHHHHHHHTT--TSCSCCCTTCCHHHHHH
T ss_pred             CCCChh-hhhcCCCHHHHHHHHhcc---CCCEEecCCC---CC--CCCCHHHHHHHHHHhh--cccCCCCCcCCHHHHHH
Confidence            566777 666666433334433322   4689999996   54  4678888888888764  35799999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++ +.     ++++|                      +.|.|+++++.+++..+  +.+ ||.|++++|+|++|...
T Consensus        70 iA~~~-~~-----~~~~I----------------------iit~G~~~al~~~~~~l--~~~-~d~v~~~~p~~~~~~~~  118 (368)
T d1v2da_          70 LAEEF-AV-----EPESV----------------------VVTSGATEALYVLLQSL--VGP-GDEVVVLEPFFDVYLPD  118 (368)
T ss_dssp             HHHHH-TS-----CGGGE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCTTHHHH
T ss_pred             HHhhc-cc-----CCcce----------------------eeccchHHHHHHHhhcc--ccc-cccccccCCcchhhhhH
Confidence            99986 32     34555                      67999999999988755  447 89999999999999999


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++.+|.+                                                                         
T Consensus       119 ~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~  198 (368)
T d1v2da_         119 AFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELY  198 (368)
T ss_dssp             HHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred             HHhcCCccceeccccccccccCCHHHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhc
Confidence            9988864                                                                         


Q ss_pred             ---------------------------------------------hhhhhh-ccCCCchHHHHHHHHHhCChhhHHHHHH
Q psy16707        299 ---------------------------------------------KILIRA-FYSSPPIHGARIVQEILGDPKLKAQWLT  332 (420)
Q Consensus       299 ---------------------------------------------~~~~r~-~~s~pp~~ga~iv~~IL~dp~L~~~w~~  332 (420)
                                                                   ....+. ...+++...|.+++.+|..    ..+.+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~  274 (368)
T d1v2da_         199 YGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKL----ARREG  274 (368)
T ss_dssp             SSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHH----HHHTT
T ss_pred             ccccccccccccccccceeecccccccccccccccccccccccchhhhhhhcccccccccccccccccccc----ccchh
Confidence                                                         111222 2344455566655555543    34456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC----------C--cEEE
Q psy16707        333 EVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD----------G--RISM  400 (420)
Q Consensus       333 el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~----------g--Ris~  400 (420)
                      .++.+++.|+++|+.+.+.|++.|    |....+++|+|.|+.++...+.+|++++||++.||          +  |||+
T Consensus       275 ~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~p~g~~~~~~~l~~~~~~~ll~~~gI~v~pg~~F~~~~~~~~~iRis~  350 (368)
T d1v2da_         275 FYEALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAELPGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAF  350 (368)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEECTTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEEC
T ss_pred             hHHHHHHHHHHhhhhhhhhHHhcC----cEEecCCceeEEEEeCCccHHHHHHHhCCEEEEechhhCCCCCCCCEEEEEe
Confidence            677788999999999999999998    77788899999999887766677889999999874          2  9999


Q ss_pred             cccCCCCHHHHHHHHHHHh
Q psy16707        401 AGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       401 agl~~~ni~~la~AI~~vv  419 (420)
                      + -++++++...+.|.+++
T Consensus       351 ~-~~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         351 C-KTEEELHLALERLGRVV  368 (368)
T ss_dssp             C-SCHHHHHHHHHHHHHHC
T ss_pred             c-CCHHHHHHHHHHHHHhC
Confidence            7 46677777777777764

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.87  E-value=1.5e-22  Score=202.79  Aligned_cols=125  Identities=48%  Similarity=0.822  Sum_probs=121.2

Q ss_pred             chHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceee
Q psy16707          3 FHNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY   82 (420)
Q Consensus         3 ~~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~   82 (420)
                      ++.++..+.+++|++||.++++++..+++|+..+++|.++++.|++|++.+|+.|++.|++++.++.|+++..|.|||++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~  362 (412)
T d1ajsa_         283 VLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSF  362 (412)
T ss_dssp             HHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEE
T ss_pred             HHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEe
Confidence            35667788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         83 TGLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        83 ~gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      +||++++|++|.++||||++++||||+||+|++||+++|+||++|
T Consensus       363 ~~ls~~~v~~L~~e~gV~~vpg~Ri~~ag~~~~~i~~~a~aI~~a  407 (412)
T d1ajsa_         363 TGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEA  407 (412)
T ss_dssp             CCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHhCCEEEeCCCeEEeccCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=1.3e-21  Score=193.50  Aligned_cols=240  Identities=12%  Similarity=0.078  Sum_probs=175.8

Q ss_pred             chhhhccccCCChHHHHHHHHH--ccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFK--KDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~--~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a  211 (420)
                      ||++ +..+++.||..+...+.  +..+.++|||++|.   ||  +++++.+.+|.....  +..+.|+|..|.++||++
T Consensus         1 ~~~r-~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~---p~--~~~p~~~~~al~~~~--~~~~~Y~~~~G~~~LR~a   72 (389)
T d2gb3a1           1 FSDR-VLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQ---PD--LKTPEVFFERIYENK--PEVVYYSHSAGIWELREA   72 (389)
T ss_dssp             CCHH-HHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCC---CC--SCCCTHHHHHHHHTC--CSSCCCCCTTCCHHHHHH
T ss_pred             CChh-hhcCCCCHHHHHHHHHHHHHHcCCCEEECCCCC---CC--CCCCHHHHHHHHhcC--CCCCCCCCCcCCHHHHHH
Confidence            5666 88899999988754332  22456889999996   55  567788888877653  357899999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+..+++++|                      +.|.|+++++.+++..+  +.| ||.|++++|+|+.|...
T Consensus        73 ia~~~~~~~g~~~~~~~I----------------------~it~G~~~~l~~~~~~l--~~~-gd~V~i~~P~y~~~~~~  127 (389)
T d2gb3a1          73 FASYYKRRQRVDVKPENV----------------------LVTNGGSEAILFSFAVI--ANP-GDEILVLEPFYANYNAF  127 (389)
T ss_dssp             HHHHHHHTSCCCCCGGGE----------------------EEESHHHHHHHHHHHHH--CCT-TCEEEEEESCCTHHHHH
T ss_pred             HHHHHHHhcCCCcccceE----------------------Eeccccccccccccccc--ccC-CCeEEEeCCCCcccccc
Confidence            999996554445666766                      56999999999988765  457 99999999999999999


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++..|+.                                                                         
T Consensus       128 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~  207 (389)
T d2gb3a1         128 AKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR  207 (389)
T ss_dssp             HHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred             ccccCccccccccccccccchhhhhhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccc
Confidence            9999875                                                                         


Q ss_pred             --------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q psy16707        299 --------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEV  334 (420)
Q Consensus       299 --------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el  334 (420)
                                                                  .......+.+++...+.++..++.+.   .   +.+
T Consensus       208 ~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~---~~~  281 (389)
T d2gb3a1         208 GEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---D---SFF  281 (389)
T ss_dssp             SCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---H---HHH
T ss_pred             cccccccccccccccccccccccccCcccceeeeeccchhHHHHHhhhhhcccccccccccccccccccc---c---hhc
Confidence                                                        11223445555666666666656532   2   455


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC----CHHHHHHHHHhC-----CeEEeCC---------C
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NATQVEKLIKEH-----SVYLTKD---------G  396 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l----~~~~v~~Ll~e~-----~Vy~~p~---------g  396 (420)
                      +.++++++++|+.+.+.|+++|.   ..+..++.|+|.|+.+    +.+++++|++++     +|.+.|+         |
T Consensus       282 ~~~~~~~~~~~~~~~~~L~~~~~---~~~~~p~~g~~~~~~lp~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~  358 (389)
T d2gb3a1         282 DFVRETYRERVETVLKKLEEHGL---KRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLG  358 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC---CCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTT
T ss_pred             ccccccccccchhhhhhhhhhcc---ccccCCCceEEEEEeCCCCCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCC
Confidence            66678999999999999999884   2356778999999754    256788888875     5666653         1


Q ss_pred             ----cEEEcccCCCCHHHHHHHHH
Q psy16707        397 ----RISMAGVTSKNVGYLAKAIH  416 (420)
Q Consensus       397 ----Ris~agl~~~ni~~la~AI~  416 (420)
                          |||+| .++++++.-.+.|.
T Consensus       359 ~~~iRis~~-~~~~~l~~a~~~L~  381 (389)
T d2gb3a1         359 KKEIRIACV-LEKDLLSRAIDVLM  381 (389)
T ss_dssp             SSEEEEECC-SCHHHHHHHHHHHH
T ss_pred             CCEEEEEEc-CCHHHHHHHHHHHH
Confidence                99987 55555443333333

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.86  E-value=5.4e-22  Score=197.24  Aligned_cols=249  Identities=14%  Similarity=0.139  Sum_probs=185.2

Q ss_pred             chhhhccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHH
Q psy16707        134 FQDARTSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKL  211 (420)
Q Consensus       134 ~~~~~~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a  211 (420)
                      +|++ ...++..+|..+.+.+   .++++|||++|.   |+....+.+.++++...+....  ....|.|..|.++||++
T Consensus         7 ~~~~-~~~~~~s~ire~~~~~---~~~~~i~l~~G~---P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~a   79 (403)
T d1wsta1           7 FSEK-AMLMKASEVRELLKLV---ETSDVISLAGGL---PAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLA   79 (403)
T ss_dssp             CCHH-HHHCCCHHHHHHHHHH---TSSSCEECCCCC---CCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHH
T ss_pred             HHHH-HhcCCCcHHHHHHHHh---CCCCcEECCCCC---CCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHH
Confidence            4555 6677777887776544   457899999996   7766667788988888876432  23579999999999999


Q ss_pred             HHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHH
Q psy16707        212 AAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPI  291 (420)
Q Consensus       212 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i  291 (420)
                      +++++....+..+++++|                      +.|.|+++++..+...+  +.| ||.|++++|+|++|...
T Consensus        80 ia~~l~~~~g~~~~~~~I----------------------~it~G~~~al~~~~~~l--~~~-gd~v~~~~P~y~~~~~~  134 (403)
T d1wsta1          80 LARWMEKRYDIPMSKVEI----------------------MTVAGSQQALDLIGRVF--LNP-GDPIVVEAPTYLAAIQA  134 (403)
T ss_dssp             HHHHHHHHHCCCCTTCEE----------------------EEESSHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHH
T ss_pred             HHHHHHHHhCCCCChHHe----------------------eecccchHHHHHHHHHH--hhc-CCccccCCCcchhhhHH
Confidence            999983322223456655                      56999999999998755  457 99999999999999999


Q ss_pred             HhhcCcc-------------------------------------------------------------------------
Q psy16707        292 CKHTGLE-------------------------------------------------------------------------  298 (420)
Q Consensus       292 ~~~aG~~-------------------------------------------------------------------------  298 (420)
                      ++.+|++                                                                         
T Consensus       135 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~  214 (403)
T d1wsta1         135 FKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYS  214 (403)
T ss_dssp             HHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred             HhhccccceeEeecccCCccccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchh
Confidence            9999886                                                                         


Q ss_pred             --------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHH
Q psy16707        299 --------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKA  328 (420)
Q Consensus       299 --------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~  328 (420)
                                                                        .........+++...+.+.+.++..    .
T Consensus       215 ~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  290 (403)
T d1wsta1         215 ELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVEN----G  290 (403)
T ss_dssp             TCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT----T
T ss_pred             heecCCCCCCcccccCCCCcEEEEccccceecCcccccccccchHHHHHHHHHHhhhccccccchhhhHHhhhhc----c
Confidence                                                              2223445566677777766665543    2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec----CCCHHHHHHHHHhCCeEEeCC---------
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT----GLNATQVEKLIKEHSVYLTKD---------  395 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~----~l~~~~v~~Ll~e~~Vy~~p~---------  395 (420)
                      .+.+.++.+++.+.++|+.+.+.|.+.... .+.+..+++|+|.|+    +.+.+++.+++.++||+++||         
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~  369 (403)
T d1wsta1         291 YLDEHIPKIIEFYKPRRDAMLEALEEYMPE-GVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDK  369 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TCEECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCC
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhccC-CeEEeCCCceeEEEEECCCCCCHHHHHHHHHHCCEEEEechhhcCCCCC
Confidence            445667777799999999999999886422 245677899999997    444565655567889999885         


Q ss_pred             -C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 -G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                       +  ||+++.+++++++...+.|.+++
T Consensus       370 ~~~iRi~~~~~~~~~l~~al~rl~~~l  396 (403)
T d1wsta1         370 KNTMRLNFTYVPEETIREGVRRLAETI  396 (403)
T ss_dssp             CSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence             1  99999888888777666666554

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=2.4e-22  Score=201.41  Aligned_cols=246  Identities=13%  Similarity=0.145  Sum_probs=181.6

Q ss_pred             ccccCCChHHHHHHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccC--CCCCCCCCCCCHHHHHHHHHHH
Q psy16707        139 TSSVKVPSSNLLTEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKN--LDKEYAPIIGAPDFGKLAAQLA  216 (420)
Q Consensus       139 ~~~~~~d~i~~l~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~--~~~~Y~p~~G~~~fr~a~~~~~  216 (420)
                      ..++.+++|..+...   ..++++|||+.|.   ||....+.+.++++.+.+.+..  ....|+|..|+++||+++++++
T Consensus        20 ~~~~~~s~ir~~~~~---~~~~~~I~l~~G~---Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~   93 (420)
T d1vp4a_          20 GQNMKSSIIREILKF---AADKDAISFGGGV---PDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLL   93 (420)
T ss_dssp             HHTCCCCCHHHHTTT---TTSTTCEECCCCS---CCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHH
T ss_pred             HHhCCCcHHHHHHHH---hCCCCcEecCCcC---CCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHH
Confidence            346778888776543   3567999999997   7776666777888877765432  2368999999999999999998


Q ss_pred             cCCCCc-cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhc
Q psy16707        217 YGEDCP-QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHT  295 (420)
Q Consensus       217 ~g~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~a  295 (420)
                      ....+. .+++++|                      +.|.|+++++.+++..+  +.| ||.|++|+|+|++|...++.+
T Consensus        94 ~~~~g~~~~~~~~I----------------------~it~G~~~al~~~~~~~--~~~-Gd~Vlv~~P~y~~~~~~~~~~  148 (420)
T d1vp4a_          94 ERMYGITGLDEDNL----------------------IFTVGSQQALDLIGKLF--LDD-ESYCVLDDPAYLGAINAFRQY  148 (420)
T ss_dssp             HHHHCCCSCCGGGE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEEESCCHHHHHHHHTT
T ss_pred             HHHhCCCCCCHHHe----------------------EeccchhhhHHHHHHhh--hcc-ccccccccccccchhHHHHHH
Confidence            322211 1345555                      66999999999988755  558 999999999999999999998


Q ss_pred             Ccc-----------------------------------------------------------------------------
Q psy16707        296 GLE-----------------------------------------------------------------------------  298 (420)
Q Consensus       296 G~~-----------------------------------------------------------------------------  298 (420)
                      |++                                                                             
T Consensus       149 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l  228 (420)
T d1vp4a_         149 LANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGAL  228 (420)
T ss_dssp             TCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTC
T ss_pred             hhhcccccccccccccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhc
Confidence            875                                                                             


Q ss_pred             ------------------------------------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHH
Q psy16707        299 ------------------------------------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQW  330 (420)
Q Consensus       299 ------------------------------------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w  330 (420)
                                                                      .........++|...|.+++.++.+    ..|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~~G~RiG~~~~~~~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~----~~~  304 (420)
T d1vp4a_         229 RYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLER----YDL  304 (420)
T ss_dssp             BCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH----SCH
T ss_pred             cccCcccccccccccccceeEEeccccccccccccccccccchhhhhhhhhhhhccccCchhhhhhhhhhccc----ccc
Confidence                                                            1112233345677788777766643    356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCcccCCCCceEEecCC----CHHHHHHHHHhCCeEEeCC----------
Q psy16707        331 LTEVKGMADRIISMRQSLKDNLQKEGSNK-PWNHITDQIGMFCYTGL----NATQVEKLIKEHSVYLTKD----------  395 (420)
Q Consensus       331 ~~el~~m~~r~~~~R~~l~~~L~~~g~~~-~w~~i~~q~GmF~~~~l----~~~~v~~Ll~e~~Vy~~p~----------  395 (420)
                      .++++.++++|+++|+.+.+.|++..... .+.+..+++|||.|+.+    ++.++..+++++||.+.||          
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~~~~~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~  384 (420)
T d1vp4a_         305 LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPS  384 (420)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCC
T ss_pred             cccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEECCCCCCHHHHHHHHHHCCeEEEechhhCCCCCCC
Confidence            67788888999999999999998863322 26677889999999744    4444445567899999875          


Q ss_pred             C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        396 G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +  |||+|..++++++...+.|.+++
T Consensus       385 ~~iRls~~~~~~e~l~~a~~rL~~~l  410 (420)
T d1vp4a_         385 PSMRLSFCLPPDEKIVEGIKRLREVV  410 (420)
T ss_dssp             SEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCcCCHHHHHHHHHHHHHHH
Confidence            1  99999877777777777777665

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=6.4e-22  Score=197.31  Aligned_cols=123  Identities=44%  Similarity=0.689  Sum_probs=119.1

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .++....+.++++||..+++++..+++++++..+|.++++.|++|++.+|+.|.+.|++.+++++|.++..|.|||+++|
T Consensus       274 ~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~  353 (397)
T d3tata_         274 GQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTG  353 (397)
T ss_dssp             HHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCC
T ss_pred             HHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcCCCceEEecC
Confidence            45566789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         85 LNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        85 L~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      |+++++++|++|||||++++||||+||+|++||+++++||++|
T Consensus       354 ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~~~i~~~~~ai~~v  396 (397)
T d3tata_         354 LSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAV  396 (397)
T ss_dssp             CCHHHHHHHTTTTCEECCSSSCCBTTSCCTTTHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCEEeCCCCEEEeccCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999987

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.85  E-value=9.5e-22  Score=196.29  Aligned_cols=124  Identities=65%  Similarity=1.071  Sum_probs=120.3

Q ss_pred             hHHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          4 HNAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         4 ~~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      +.++....|..|+++|.+++++++.+|.|+.+.++|.++++.+++|+..+|..|++.|++++.+++|+|+..|.|||+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~  355 (401)
T d7aata_         276 ESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFT  355 (401)
T ss_dssp             HHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEEC
T ss_pred             HHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceECCCCeEEEec
Confidence            45667788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHhcceEEcCCCceecccCCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQVEKLIKEHSVYLTKDGRISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~qv~~L~~~~~IY~~~~GRinvagl~~~ni~~va~ai~~v  127 (420)
                      ||+++++++|++|||||+++++|||+||+|++||+++|+||++|
T Consensus       356 ~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~~~~i~~la~ai~~v  399 (401)
T d7aata_         356 GLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV  399 (401)
T ss_dssp             CCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCEEECCCcEEEeccCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999997

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=8.4e-20  Score=178.67  Aligned_cols=217  Identities=11%  Similarity=0.041  Sum_probs=154.4

Q ss_pred             ceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCcc
Q psy16707        162 KINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSL  241 (420)
Q Consensus       162 kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~  241 (420)
                      .|.|+||.   +  ++++++.|++|..+...+ ..++|+|..| ++||+++++++...++..+++++|            
T Consensus         1 ~~~~~~~~---~--df~~p~~i~eal~~~~~~-~~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i------------   61 (361)
T d1d2fa_           1 LLPFTISD---M--DFATAPCIIEALNQRLMH-GVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTV------------   61 (361)
T ss_dssp             CEECCSSS---C--SSCCCHHHHHHHHHHHTT-CCCCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGE------------
T ss_pred             CcCcCCCC---C--CCCCCHHHHHHHHHHHhC-CCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceE------------
Confidence            48999996   4  468899999998887654 5678999999 789999999984443333555655            


Q ss_pred             ccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----------------------
Q psy16707        242 RVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-----------------------  298 (420)
Q Consensus       242 ~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-----------------------  298 (420)
                                +.|.|+++++..++..+  +.| ||+|++|+|+|++|..+++.+|.+                       
T Consensus        62 ----------~it~G~~~~l~~~~~~l--~~~-gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~  128 (361)
T d1d2fa_          62 ----------VYGPSVIYMVSELIRQW--SET-GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAV  128 (361)
T ss_dssp             ----------EEESCHHHHHHHHHHHS--SCT-TCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHH
T ss_pred             ----------EEeCCHHHHHHHHhhhc--ccc-ccccccccccccchhHHHHhhcceEEeecccccccccccccccchhh
Confidence                      67999999999888754  558 999999999999999999998875                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       129 ~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~  208 (361)
T d1d2fa_         129 LAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNI  208 (361)
T ss_dssp             HTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTC
T ss_pred             cccCCceeEEecccccccccccchhhhhhhhhhhhhhheeeeeccccccccccccccccccccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy16707        299 ---------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGS  357 (420)
Q Consensus       299 ---------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~  357 (420)
                                           ........++|+...+. ++....  ....+   ..+.++..++++|+.+.+.+.+.+.
T Consensus       209 ~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~--~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~  282 (361)
T d1d2fa_         209 PALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALT-AHIAAY--QQGAP---WLDALRIYLKDNLTYIADKMNAAFP  282 (361)
T ss_dssp             GGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHH-HHHHHH--HHCHH---HHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             ccccceeeecchhHHHHHHhhhcccccccccchhhhHH-HHHHHh--hccch---hhhcccccchhhHHHHHHHhhhhcc
Confidence                                 01112234454444443 322111  11123   3445557888888888888777653


Q ss_pred             CCCCcccCCCCceEEecC-----CCH-HHHHHHHHhCCeEEeCC------C----cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        358 NKPWNHITDQIGMFCYTG-----LNA-TQVEKLIKEHSVYLTKD------G----RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       358 ~~~w~~i~~q~GmF~~~~-----l~~-~~v~~Ll~e~~Vy~~p~------g----Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      .  +...++++|||.|+.     .++ +++++|++++||++.||      |    |||++ .+++++++-.+.|.+++
T Consensus       283 ~--~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~-~~~e~l~~al~rl~~~l  357 (361)
T d1d2fa_         283 E--LNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG-CPRSKLEKGVAGLINAI  357 (361)
T ss_dssp             S--CCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred             c--ccccccCceeEEEEEccCCCCCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEc-CCHHHHHHHHHHHHHHH
Confidence            2  556778889999863     344 66789999999999875      2    99986 67777666556655554

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.81  E-value=1.6e-19  Score=179.65  Aligned_cols=224  Identities=12%  Similarity=0.064  Sum_probs=158.5

Q ss_pred             HccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecc
Q psy16707        155 KKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQG  234 (420)
Q Consensus       155 ~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~  234 (420)
                      ....+.++|||++|.   +  ++++++.|++|.....++ ..++|+  .|.++||+++++++...++..+.+++|     
T Consensus        26 ~~~~g~~vi~l~~g~---p--df~~p~~v~~al~~~~~~-~~~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~~I-----   92 (394)
T d1c7na_          26 NPEVGNEVVPLSVAD---M--EFKNPPELIEGLKKYLDE-TVLGYT--GPTEEYKKTVKKWMKDRHQWDIQTDWI-----   92 (394)
T ss_dssp             CTTCCTTCCCCCSSS---C--SSCCCHHHHHHHHHHHHH-CCCSSB--CCCHHHHHHHHHHHHHHHCCCCCGGGE-----
T ss_pred             hHhcCCCeEEccCCC---C--CCCCCHHHHHHHHHHHhC-CCcCCC--CCCHHHHHHHHHHHHHhcCCCCCCcce-----
Confidence            344567899999996   5  468899999988887754 567895  489999999999984332222455655     


Q ss_pred             cCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------
Q psy16707        235 ISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------  298 (420)
Q Consensus       235 ~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------  298 (420)
                                       +.|.|+++++.+++..+  +.| ||.|++++|+|++|...++.+|+.                
T Consensus        93 -----------------~vt~G~~~al~~~~~~~--~~p-gd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d  152 (394)
T d1c7na_          93 -----------------INTAGVVPAVFNAVREF--TKP-GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTID  152 (394)
T ss_dssp             -----------------EEESSHHHHHHHHHHHH--CCT-TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECC
T ss_pred             -----------------Eeeccchhhhhhhhccc--ccc-ccccccccCcccchhhHHhhhhhcccccccccccccccch
Confidence                             67999999999988754  558 999999999999999999998875                


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       153 ~~~~~~~~~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~  232 (394)
T d1c7na_         153 FQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTIT  232 (394)
T ss_dssp             HHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEE
T ss_pred             hhhhhhhhccccceEEEecccccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceee
Confidence                                                                                            


Q ss_pred             ----------------------------hhhhhhc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16707        299 ----------------------------KILIRAF-YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLK  349 (420)
Q Consensus       299 ----------------------------~~~~r~~-~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~  349 (420)
                                                  ....+.. .++++...+.+++....     ....+.++.+++.++++|+.+.
T Consensus       233 ~~s~SK~~~~~G~R~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  307 (394)
T d1c7na_         233 FTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICY-----KECGKWLDGCIKVIDKNQRIVK  307 (394)
T ss_dssp             EECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHH-----HHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccChhhhhhhhhhhhhccccccccccchhhhhhh-----cchhhhhcccccccchhhhhhh
Confidence                                        1122322 33333333333333221     1222344555578888898888


Q ss_pred             HHHHhcCCCCCCcccCCCCceEEec-----CCCH-HHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHH
Q psy16707        350 DNLQKEGSNKPWNHITDQIGMFCYT-----GLNA-TQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAK  413 (420)
Q Consensus       350 ~~L~~~g~~~~w~~i~~q~GmF~~~-----~l~~-~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~  413 (420)
                      +.|+..+..  +....+++|+|.|+     +.+. +++++|++++||.+.||        +  |||++ .++++|++..+
T Consensus       308 ~~l~~~~~~--~~~~~p~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~-~~~e~i~eal~  384 (394)
T d1c7na_         308 DFFEVNHPE--IKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA-APSSVIQESLE  384 (394)
T ss_dssp             HHHHHHCTT--SBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC-SCHHHHHHHHH
T ss_pred             hhhhccccc--eeecCCCceeEEEEECCCCCCCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEe-CCHHHHHHHHH
Confidence            888876532  55567788999985     4455 56689999999999985        1  99997 57777766666


Q ss_pred             HHHHHh
Q psy16707        414 AIHAVT  419 (420)
Q Consensus       414 AI~~vv  419 (420)
                      .|.+++
T Consensus       385 rl~~~l  390 (394)
T d1c7na_         385 RLNKAL  390 (394)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666554

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.80  E-value=3.5e-19  Score=179.36  Aligned_cols=239  Identities=15%  Similarity=0.202  Sum_probs=164.5

Q ss_pred             CCChHHHHHHHHHccC-----CC-CceeecccccccCCCCCCchHHHHHHHHHHHcc----------CCCCCCCCCCCCH
Q psy16707        143 KVPSSNLLTEAFKKDT-----NV-NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNK----------NLDKEYAPIIGAP  206 (420)
Q Consensus       143 ~~d~i~~l~~~~~~d~-----~~-~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~----------~~~~~Y~p~~G~~  206 (420)
                      ...|-|.-.+++.+|+     +| .+|||++++      ....++.+.+-...-...          +....|+|..|++
T Consensus        13 ~~s~y~~g~~~~~~~~~~~~~np~G~i~l~~ae------n~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   86 (428)
T d1iaya_          13 ENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAE------NQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLP   86 (428)
T ss_dssp             --CCTTHHHHHHHHSBCCSSSSTTSBEECSSCC------CCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCH
T ss_pred             CCChhhHhHHHhccCCCCCcCCCCceEEeeccc------CccchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchH
Confidence            4455565445565554     33 489999995      234455554322210000          0124699999999


Q ss_pred             HHHHHHHHHHcCCCCc--cccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCC
Q psy16707        207 DFGKLAAQLAYGEDCP--QLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPT  284 (420)
Q Consensus       207 ~fr~a~~~~~~g~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~  284 (420)
                      +||+|+++++....+.  .+++++|                      +.|.|+++++.+++..+  +.| ||.|++|+|+
T Consensus        87 ~LR~aiA~~l~~~~~~~~~~~~e~I----------------------vit~G~~~al~~~~~~l--~~~-Gd~Vlv~~P~  141 (428)
T d1iaya_          87 EFRKAIAKFMEKTRGGRVRFDPERV----------------------VMAGGATGANETIIFCL--ADP-GDAFLVPSPY  141 (428)
T ss_dssp             HHHHHHHHHHHHHTTTCSCCCTTSC----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEESSC
T ss_pred             HHHHHHHHHHHHHhCCCCCCChhhE----------------------EEcCCHHHHHHHHHHHh--CCC-CCEEEEccCC
Confidence            9999999998433221  2344555                      67999999999988755  568 9999999999


Q ss_pred             CCCcHHHHhhc-Ccc-----------------------------------------------------------------
Q psy16707        285 WGNHIPICKHT-GLE-----------------------------------------------------------------  298 (420)
Q Consensus       285 w~ny~~i~~~a-G~~-----------------------------------------------------------------  298 (420)
                      |++|...+... |++                                                                 
T Consensus       142 y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~  221 (428)
T d1iaya_         142 YPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHN  221 (428)
T ss_dssp             CTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTT
T ss_pred             chHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCc
Confidence            99999877644 543                                                                 


Q ss_pred             --------------------------------------------------------------------hhhhhhccCCCc
Q psy16707        299 --------------------------------------------------------------------KILIRAFYSSPP  310 (420)
Q Consensus       299 --------------------------------------------------------------------~~~~r~~~s~pp  310 (420)
                                                                                          .......++.++
T Consensus       222 ~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~~~~~~~~~~~~~~  301 (428)
T d1iaya_         222 IHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVS  301 (428)
T ss_dssp             CEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCC
T ss_pred             EEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCCCcccccccccccchhhhhhhhhcccccc
Confidence                                                                                111123445556


Q ss_pred             hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC-----------HH
Q psy16707        311 IHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN-----------AT  379 (420)
Q Consensus       311 ~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~-----------~~  379 (420)
                      ...+.+++.++.+.+..   .+.+++++++++++|+.+.+.|+..|    |+...+++|||+|+.++           .+
T Consensus       302 ~~~~~~~~a~l~~~~~~---~~~~~~~~~~l~~r~~~~~~~L~~~g----i~~~~p~gg~f~w~~l~~~~~~~~~~~~~~  374 (428)
T d1iaya_         302 TQTQYFLAAMLSDEKFV---DNFLRESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRESTFDSEMS  374 (428)
T ss_dssp             HHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSSSHHHHHH
T ss_pred             cccccchhhhhhhhccc---cccccccccccchhHHHHHHHHHhCC----CEEecCCcceEEEEECccccccCCCCCHHH
Confidence            66666666667664322   34566677999999999999999988    77788999999997553           24


Q ss_pred             HHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        380 QVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       380 ~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      ++++|++++||++.||        |  |||||..+++.++.-.+.|.+++
T Consensus       375 l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~l~~al~Rl~~~l  424 (428)
T d1iaya_         375 LWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFV  424 (428)
T ss_dssp             HHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence            5789999999999985        2  99998777766776666666654

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.79  E-value=1.7e-18  Score=174.43  Aligned_cols=241  Identities=17%  Similarity=0.236  Sum_probs=165.9

Q ss_pred             ccCCChHHHHHHHHHccC-----CCC-ceeecccccccCCCCCCchHHHHHHHHHH-----Hc-c-----CCCCCCCCCC
Q psy16707        141 SVKVPSSNLLTEAFKKDT-----NVN-KINLGVGAYRDDQGKPYVLPSVKQADEIV-----LN-K-----NLDKEYAPII  203 (420)
Q Consensus       141 ~~~~d~i~~l~~~~~~d~-----~~~-kInL~iG~y~d~dg~~~~~~~V~~a~~~~-----~~-~-----~~~~~Y~p~~  203 (420)
                      +-...|.|.-.+.+.+|+     +|+ +|||++++      +.-..+.+++-...-     .. +     .....|.+..
T Consensus        11 ~~~~s~y~~g~~~~~~~~~~~~~np~G~i~l~~~e------n~l~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~   84 (431)
T d1m7ya_          11 HGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAE------NQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYH   84 (431)
T ss_dssp             ----CHHHHHHHHHHHSBCCSSSCTTSBEECSSCC------CCSCHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTT
T ss_pred             CccCCchhhhhhhhhcCCCCCcCCCCcEEEeeccc------ccccHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCc
Confidence            334566776666676664     343 89999995      234455555432210     00 0     0113599999


Q ss_pred             CCHHHHHHHHHHHcCCC--CccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEc
Q psy16707        204 GAPDFGKLAAQLAYGED--CPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVP  281 (420)
Q Consensus       204 G~~~fr~a~~~~~~g~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~Vlvp  281 (420)
                      |.++||+++++++-...  ...+++++|                      +.|.|+|+++.+++..+  +.| ||+|++|
T Consensus        85 G~~~LR~aiA~~l~~~~~~~~~~~pe~I----------------------~it~G~~~al~~~~~~l--~~p-Gd~Vlv~  139 (431)
T d1m7ya_          85 GLPAFKKAMVDFMAEIRGNKVTFDPNHL----------------------VLTAGATSANETFIFCL--ADP-GEAVLIP  139 (431)
T ss_dssp             CCHHHHHHHHHHHHHHTTTSSCCCGGGE----------------------EEEEHHHHHHHHHHHHH--CCT-TCEEEEE
T ss_pred             CcHHHHHHHHHHHHHHhCCCCCCCcceE----------------------EECCCHHHHHHHHHHHh--cCC-CCEEEEe
Confidence            99999999999983222  123455555                      67999999999998765  568 9999999


Q ss_pred             CCCCCCcHHHHhhc-Ccc--------------------------------------------------------------
Q psy16707        282 TPTWGNHIPICKHT-GLE--------------------------------------------------------------  298 (420)
Q Consensus       282 dP~w~ny~~i~~~a-G~~--------------------------------------------------------------  298 (420)
                      +|+|+.|...++.. |.+                                                              
T Consensus       140 ~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~  219 (431)
T d1m7ya_         140 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVE  219 (431)
T ss_dssp             ESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCcccccccccccccccccccccc
Confidence            99999999888754 432                                                              


Q ss_pred             -------------------------------------------------------------------------hhhhhhc
Q psy16707        299 -------------------------------------------------------------------------KILIRAF  305 (420)
Q Consensus       299 -------------------------------------------------------------------------~~~~r~~  305 (420)
                                                                                               .......
T Consensus       220 ~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~i~~~~~~~~~  299 (431)
T d1m7ya_         220 DKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS  299 (431)
T ss_dssp             HHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGG
T ss_pred             ccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhhhHHHHHHHhc
Confidence                                                                                     1111233


Q ss_pred             cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCC--------
Q psy16707        306 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLN--------  377 (420)
Q Consensus       306 ~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~--------  377 (420)
                      +++++...+.+++.++.+....   .+.+++++.+++++|+.+.+.|++.|    +.++++++|||.|+.++        
T Consensus       300 ~~~~~~~~~~~~~a~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g----i~~~~p~gg~f~w~~l~~~~~~~~~  372 (431)
T d1m7ya_         300 FGLVSSQTQHLLSAMLSDKKLT---KNYIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTF  372 (431)
T ss_dssp             GSCCCHHHHHHHHHHHHCHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSSSH
T ss_pred             cccccccccchhhhhhccchhh---hhhhhhhhhhhhhhhhhhhhhhhcCC----cEEecCCceeEEEEECccccccCcc
Confidence            4455556666666666554333   34566677999999999999999988    67788999999997553        


Q ss_pred             ---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        378 ---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       378 ---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                         .+++++|++++||++.||        |  ||++|..+++.++...+.|++++
T Consensus       373 ~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~~~e~~l~~al~rL~~~l  427 (431)
T d1m7ya_         373 EAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV  427 (431)
T ss_dssp             HHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCcCCHHHHHHHHHHHHHHH
Confidence               256789999999999985        2  99999777767766666666554

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.70  E-value=2.2e-16  Score=153.48  Aligned_cols=218  Identities=13%  Similarity=0.090  Sum_probs=150.4

Q ss_pred             hHHHHHHHHHcc--CCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCcc
Q psy16707        146 SSNLLTEAFKKD--TNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQ  223 (420)
Q Consensus       146 ~i~~l~~~~~~d--~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~  223 (420)
                      |...+++.+++-  .+.++|+|++|+    +. .++++.|.++....... ....|.|..|.++||+++++++....   
T Consensus         3 p~~~~~~~~~~~~~~~~d~~~l~~~e----np-~~~p~~i~~~~~~~~~~-~~~~~yp~~g~~~Lr~aia~~~~~~~---   73 (334)
T d2f8ja1           3 PLDLIAKRAYPYETEKRDKTYLALNE----NP-FPFPEDLVDEVFRRLNS-DALRIYYDSPDEELIEKILSYLDTDF---   73 (334)
T ss_dssp             HHHHHHHHSCCCCCCCCCSEECSSCC----CS-SCCCHHHHHHHHHHCCT-TGGGSCCCSSCHHHHHHHHHHHTCSS---
T ss_pred             HHHHHHHhcccccccCCCceEEECCC----CC-CCCCHHHHHHHHHHhhc-chhcCCCCCCcHHHHHHHHHHhcccC---
Confidence            333444444332  357999999995    23 34556665555544433 44566688999999999999874432   


Q ss_pred             ccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc-----
Q psy16707        224 LKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE-----  298 (420)
Q Consensus       224 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~-----  298 (420)
                      +.+++|                      +.|.|+++++.+++.      + +|+|++++|+|+.|...++.+|++     
T Consensus        74 v~~d~I----------------------~it~G~~~~l~~l~~------~-~d~v~i~~P~y~~~~~~~~~~g~~~v~v~  124 (334)
T d2f8ja1          74 LSKNNV----------------------SVGNGADEIIYVMML------M-FDRSVFFPPTYSCYRIFAKAVGAKFLEVP  124 (334)
T ss_dssp             CCGGGE----------------------EEEEHHHHHHHHHHH------H-SSEEEECSSCCHHHHHHHHHHTCCEEECC
T ss_pred             CCcceE----------------------EecCcchhHHHHHhh------h-ccccccccccccccccchhccCCcccccc
Confidence            445555                      568999999887643      5 799999999999999999999986     


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       125 ~~~~~~~~~~~~~~~~~l~l~nP~NPtG~~~s~~~l~~~~~~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~  204 (334)
T d2f8ja1         125 LTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAF  204 (334)
T ss_dssp             CCTTSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHHHTTTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEEESTTTS
T ss_pred             ccccccccccccccceEEEecccccccceeecHHHhhccccceeEEeecccchhhcccccccccccCceEEEEecCcccc
Confidence                                                                                            


Q ss_pred             -------------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy16707        299 -------------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNK  359 (420)
Q Consensus       299 -------------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~  359 (420)
                                         ....+.. .+.+...+.++...+.+.       +.++.++.+++++|+.+.+.|+++|   
T Consensus       205 ~~~G~R~G~~~~~~~~i~~l~~~~~~-~~~s~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~g---  273 (334)
T d2f8ja1         205 SLAAQRVGYVVASEKFIDAYNRVRLP-FNVSYVSQMFAKVALDHR-------EIFEERTKFIVEERERMKSALREMG---  273 (334)
T ss_dssp             SCTTTCEEEEEECHHHHHHHHHHSCT-TCSCHHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             chhhhhhhhcccchHHHHHHHHhhcc-cccchhhhhhcccccccc-------cchhhHHHHHHHHHHHHHHHHHHCC---
Confidence                               1112333 344666777666656542       3455666899999999999999998   


Q ss_pred             CCcccCCCCceEEecCCC---HHHH-HHHHHhCCeEEeC--CC-cEEEcccCCCCHHHHHHHHHH
Q psy16707        360 PWNHITDQIGMFCYTGLN---ATQV-EKLIKEHSVYLTK--DG-RISMAGVTSKNVGYLAKAIHA  417 (420)
Q Consensus       360 ~w~~i~~q~GmF~~~~l~---~~~v-~~Ll~e~~Vy~~p--~g-Ris~agl~~~ni~~la~AI~~  417 (420)
                       |...+++ |.|.|+.++   .+.+ +.| .++||.+.+  +. |||++  +.+.++.+.++|++
T Consensus       274 -~~~~~~~-g~f~~~~~~~~~~~~~~~~L-~~~GI~vr~~~~~vRis~g--~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         274 -YRITDSR-GNFVFVFMEKEEKERLLEHL-RTKNVAVRSFREGVRITIG--KREENDMILRELEV  333 (334)
T ss_dssp             -CEECCCC-SSEEEEECCHHHHHHHHHHH-HHTTEECEEETTEEEEECC--CHHHHHHHHHHHHH
T ss_pred             -CeECCCC-ceEEEEECCCCCHHHHHHHH-HHCCCEECCCCCeEEEEcC--CHHHHHHHHHHHhc
Confidence             6666554 567776554   2344 555 678999864  22 99986  45567888888764

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.42  E-value=2.1e-12  Score=125.25  Aligned_cols=203  Identities=14%  Similarity=0.079  Sum_probs=142.8

Q ss_pred             CceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCc
Q psy16707        161 NKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGS  240 (420)
Q Consensus       161 ~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~  240 (420)
                      +.|||+.|+  ++-   ++++.+++|......  ..+.| |..|.++||+++++++ |.     ++++|           
T Consensus        23 ~~idls~~~--np~---~~p~~~~~a~~~~~~--~~~~Y-p~~~~~~Lr~aia~~~-~v-----~~~~I-----------   77 (355)
T d1lc5a_          23 QLLDFSANI--NPL---GMPVSVKRALIDNLD--CIERY-PDADYFHLHQALARHH-QV-----PASWI-----------   77 (355)
T ss_dssp             GSEECSSCC--CTT---CCCHHHHHHHHHTGG--GGGSC-CCTTCHHHHHHHHHHH-TS-----CGGGE-----------
T ss_pred             heEEccCCC--CCC---CCCHHHHHHHHHHHH--HhccC-CCCChHHHHHHHHHHh-CC-----CHHHE-----------
Confidence            589999996  332   356777777766543  34668 6668899999999986 43     34555           


Q ss_pred             cccccccccceeecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc----------------------
Q psy16707        241 LRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE----------------------  298 (420)
Q Consensus       241 ~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~----------------------  298 (420)
                                 +.+.|++.++.+...++    . ++.++|+.|+|+.|.......+++                      
T Consensus        78 -----------~~~~g~~~~~~~~~~~~----~-~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  141 (355)
T d1lc5a_          78 -----------LAGNGETESIFTVASGL----K-PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEAL  141 (355)
T ss_dssp             -----------EEESSHHHHHHHHHHHH----C-CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHC
T ss_pred             -----------EecccHHHHHHHHHhhh----c-cccccccCCccceeccccccccccceeeeeeccCCccceeeeeecc
Confidence                       45777778777766543    4 577889999999999888877764                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       142 ~~~~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl  221 (355)
T d1lc5a_         142 TPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGL  221 (355)
T ss_dssp             CTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTT
T ss_pred             ccccceeeeecccCcccccchhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy16707        299 ---------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNH  363 (420)
Q Consensus       299 ---------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~  363 (420)
                                     ....+..+ +.+..++.++...|++    ..|   ++..+++++++|+.+.+.|.+++.   |. 
T Consensus       222 R~G~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~l~~----~~~---~~~~~~~~~~~~~~~~~~l~~~~~---~~-  289 (355)
T d1lc5a_         222 RLGYLVNSDDAAMARMRRQQMPW-SVNALAALAGEVALQD----SAW---QQATWHWLREEGARFYQALCQLPL---LT-  289 (355)
T ss_dssp             CCEEEECCCHHHHHHHHHHSCTT-CSCHHHHHHHHHGGGC----HHH---HHHHHHHHHHHHHHHHHHHHTSTT---EE-
T ss_pred             cccceeccchhhhHHHHhhcCCc-cccccccccccccccc----cch---hHHHHHHHHHHHHHHHHHHhhcCC---cE-
Confidence                           11123333 3466777777776765    233   344558889999999999998752   44 


Q ss_pred             cCCCCceEEecCCC---HHHHHHHHHhCCeEEeCC--------C--cEEEcccCCCCHHHHHHHHHHHh
Q psy16707        364 ITDQIGMFCYTGLN---ATQVEKLIKEHSVYLTKD--------G--RISMAGVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       364 i~~q~GmF~~~~l~---~~~v~~Ll~e~~Vy~~p~--------g--Ris~agl~~~ni~~la~AI~~vv  419 (420)
                      +.+..|+|.|+.++   .+.+++| .++||.+.|+        +  |||+.  +.++++++.+|+++++
T Consensus       290 ~~p~~~~f~~~~~~~~~~~~~~~L-~~~gv~vr~~~~f~~~~~~~iRis~~--~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         290 VYPGRANYLLLRCEREDIDLQRRL-LTQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVL  355 (355)
T ss_dssp             ECCCSSSEEEEEESCTTCCHHHHH-HTTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred             ECCCCCEEEEEECCCCHHHHHHHH-HHCCcEEEeCccCCCCCCCEEEEEeC--CHHHHHHHHHHHHHhC
Confidence            45678899987554   2455666 5779999764        1  99985  6678899999999874

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=3.4e-11  Score=116.83  Aligned_cols=201  Identities=16%  Similarity=0.191  Sum_probs=137.6

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCC
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGT  238 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~  238 (420)
                      ....|.|..++  +|.|  +.+ .+.       + ...+.| |-.+..+||+++++++ |.     ++++|         
T Consensus        26 ~~~~i~L~~ne--~p~~--~~~-~~~-------~-~~l~rY-Pd~~~~~Lr~~ia~~~-gv-----~pe~I---------   76 (354)
T d1fg7a_          26 GNGDVWLNANE--YPTA--VEF-QLT-------Q-QTLNRY-PECQPKAVIENYAQYA-GV-----KPEQV---------   76 (354)
T ss_dssp             TTCSEECSSCC--CSSC--CCC-CCC-------C-CCTTSC-CCSSCHHHHHHHHHHH-TS-----CGGGE---------
T ss_pred             CCCCEEeeCCC--CCCC--CCH-HHH-------H-HHHhcC-CCCcHHHHHHHHHHHh-CC-----ChHHe---------
Confidence            45678888775  2333  222 221       1 235678 5556789999999976 53     35556         


Q ss_pred             CccccccccccceeecccchHHHHHHHHHHHhcCCCCC-EEEEcCCCCCCcHHHHhhcCcc-------------------
Q psy16707        239 GSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEK-VIYVPTPTWGNHIPICKHTGLE-------------------  298 (420)
Q Consensus       239 ~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd-~VlvpdP~w~ny~~i~~~aG~~-------------------  298 (420)
                                   +.|.|+++++.+++..+  +.| || +|++|+|+|+.|...++.+|.+                   
T Consensus        77 -------------~it~Gs~eai~~~~~~~--~~p-gd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~  140 (354)
T d1fg7a_          77 -------------LVSRGADEGIELLIRAF--CEP-GKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISD  140 (354)
T ss_dssp             -------------EEESHHHHHHHHHHHHH--CCT-TTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHT
T ss_pred             -------------eeccCchHHHHHHHHHh--hcc-ccccccccccccccchhhhhccCceeeccccccccccchhhhhh
Confidence                         56999999999999855  457 87 6899999999999999999875                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       141 ~~~~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlR  220 (354)
T d1fg7a_         141 KLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLR  220 (354)
T ss_dssp             SCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGC
T ss_pred             cccccceeeccCCCccceeEeeecccccccccccccccccccccchhhccccccchhhcccccceEEeCCccccCCCccc
Confidence                                                                                            


Q ss_pred             -------------hhhhhhccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC
Q psy16707        299 -------------KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT  365 (420)
Q Consensus       299 -------------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~  365 (420)
                                   ....+..|. .+...+..+..++.+.    . ..+......++.+.|+.+.+.|.+++.   +..+.
T Consensus       221 iGy~i~~~~~i~~l~~~~~~~~-~~~~~~~~a~~~~~~~----~-~~~~~~~~~~~~~~r~~l~~~l~~~~~---~~~~~  291 (354)
T d1fg7a_         221 CGFTLANEEVINLLMKVIAPYP-LSTPVADIAAQALSPQ----G-IVAMRERVAQIIAEREYLIAALKEIPC---VEQVF  291 (354)
T ss_dssp             CEEEEECHHHHHHHHHHSCSSC-SCHHHHHHHHHHTSHH----H-HHHHHHHHHHHHHHHHHHHHHHHHSTT---EEEEC
T ss_pred             cccccccchhhhhhhhhcCccc-hhhHHHHHHHHHHhhh----c-cccccccchhhhhHHHHHHHHHHhCCC---cceeC
Confidence                         111233333 2444555555555542    2 244455557888999999999999873   34567


Q ss_pred             CCCceEEecCCC-H-HHHHHHHHhCCeEEeCCC---------cEEEcccCCCCHHHHHHHHH
Q psy16707        366 DQIGMFCYTGLN-A-TQVEKLIKEHSVYLTKDG---------RISMAGVTSKNVGYLAKAIH  416 (420)
Q Consensus       366 ~q~GmF~~~~l~-~-~~v~~Ll~e~~Vy~~p~g---------Ris~agl~~~ni~~la~AI~  416 (420)
                      +..|+|.|+.++ + +..+.| .++||++.+++         |||+.  +.+..+.+.+|++
T Consensus       292 p~~~~f~~~~~~~~~~~~~~L-~~~gIlvr~~~~~~~~~~~lRisig--t~ee~~~~l~aLk  350 (354)
T d1fg7a_         292 DSETNYILARFKASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG--TREESQRVIDALR  350 (354)
T ss_dssp             CCSSSEEEEEETTHHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHH
T ss_pred             CCCceEEEEeCCCHHHHHHHH-HHCCcEEecCCCCCCCCCEEEEEeC--CHHHHHHHHHHHh
Confidence            788999997554 3 344566 57899997631         99985  4566788888886

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.17  E-value=2.6e-11  Score=122.39  Aligned_cols=233  Identities=9%  Similarity=-0.014  Sum_probs=151.3

Q ss_pred             CCCceeecccccccCCCCCCchHHHHHHHHHHHccCC--CCCCCCCCC--C--HHHHHHHHHHHcCCCCccccCCceeee
Q psy16707        159 NVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNL--DKEYAPIIG--A--PDFGKLAAQLAYGEDCPQLKDNLISIV  232 (420)
Q Consensus       159 ~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~--~~~Y~p~~G--~--~~fr~a~~~~~~g~~~~~~~~~~i~~~  232 (420)
                      ..-++||..|.   |..  ..+-=.+.++..+.-.+.  ...|....+  .  ++|+++++++.--..+. ..+++-   
T Consensus        55 ~~~~~~~~~gd---p~~--~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna-~t~~~~---  125 (425)
T d2hoxa1          55 QGCSADVASGD---GLF--LEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNA-AAKDRY---  125 (425)
T ss_dssp             TTCCEECCSCC---CGG--GHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCB-CCTTCE---
T ss_pred             CCceeeCCCCC---CCC--CCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCC-CCCCCE---
Confidence            45688999994   433  222122333333221123  334654433  2  89999999976221122 233331   


Q ss_pred             cccCCCCccccccccccceeecccchHHHHHHHHHHHh------cCCCCCEEEEcCCCCCCcHHHHhhcCcc--------
Q psy16707        233 QGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN------FFPGEKVIYVPTPTWGNHIPICKHTGLE--------  298 (420)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~------~~p~gd~VlvpdP~w~ny~~i~~~aG~~--------  298 (420)
                                        ||.+.|.|+++..++..|..      ..| ||+|++|.|+|+.|....+..|.+        
T Consensus       126 ------------------IvvG~Gsteli~~~~~AL~~~~~~~~~~p-g~~Vv~~~P~y~~Y~~~~~~~~~~~~~~~~D~  186 (425)
T d2hoxa1         126 ------------------IVFGVGVTQLIHGLVISLSPNMTATPDAP-ESKVVAHAPFYPVFREQTKYFDKKGYVWAGNA  186 (425)
T ss_dssp             ------------------EEEESHHHHHHHHHHHHHSCCTTTCTTSC-CEEEEECSSCCHHHHHHHHHSCBTTEEEEEEG
T ss_pred             ------------------EEECCCHHHHHHHHHHHhccccccccCCC-CCEEEEecCccccHHHHHHHcCCCCCccCCCH
Confidence                              36799999999998876642      457 899999999999999999988775        


Q ss_pred             --------------------------------------------------------------------------------
Q psy16707        299 --------------------------------------------------------------------------------  298 (420)
Q Consensus       299 --------------------------------------------------------------------------------  298 (420)
                                                                                                      
T Consensus       187 ~~~~~~~~~~~~ii~l~sPnNPtG~l~~~v~~~~~~I~DEaY~~~~f~~~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~  266 (425)
T d2hoxa1         187 ANYVNVSNPEQYIEMVTSPNNPEGLLRHAVIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIK  266 (425)
T ss_dssp             GGGTTCSCGGGEEEEEESSCTTTCCCCCCSSTTCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEEC
T ss_pred             HHHHhhCCCCceEEEEECCCCCCcchhhhhhhCCEEEEeccccCccccchhhhcCCeEEEEeCHHhccCcchheeeEEeC
Confidence                                                                                            


Q ss_pred             --------hhhhhhccCCCchHHHHHHHHHhCChhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CC
Q psy16707        299 --------KILIRAFYSSPPIHGARIVQEILGDPKLK-----AQWLTEVKGMADRIISMRQSLKDNLQKEGS------NK  359 (420)
Q Consensus       299 --------~~~~r~~~s~pp~~ga~iv~~IL~dp~L~-----~~w~~el~~m~~r~~~~R~~l~~~L~~~g~------~~  359 (420)
                              ......+..+++..+|..+..+|.+..-.     ....+.++.++++++++|+.+.+.|++.+.      |.
T Consensus       267 ~~~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~  346 (425)
T d2hoxa1         267 DESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQ  346 (425)
T ss_dssp             CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCS
T ss_pred             CHHHHHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCC
Confidence                    11223345678888888777767543100     011234566778899999999999988762      10


Q ss_pred             -C----CcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeCC-------C--cEEEcccCCCCHHHHHHHHHHHhC
Q psy16707        360 -P----WNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKD-------G--RISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       360 -~----w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p~-------g--Ris~agl~~~ni~~la~AI~~vv~  420 (420)
                       .    +....++.|.|.|+..   +.+++..|++++||.+.||       +  |||++ -++++++.+.+.|++.|+
T Consensus       347 ~~~~~f~~~~~~~~~~f~wl~~~~~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~-~~~e~ld~~l~rL~~~v~  423 (425)
T d2hoxa1         347 SEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI-KTQDDFDQLMYYLKDMVK  423 (425)
T ss_dssp             CEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECS-SCHHHHHHHHHHHHHHHT
T ss_pred             ccceeeeeeccCCCcceeeeeCCCChHHHHHHHHHhCCEEEEechhcCCCCCEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence             0    0112345667777543   3456778889999999985       1  99998 578888999888888763

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=98.72  E-value=4.9e-08  Score=88.44  Aligned_cols=78  Identities=18%  Similarity=0.205  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCC---eEEeCCC----cEEEc-ccCCCCH
Q psy16707        337 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHS---VYLTKDG----RISMA-GVTSKNV  408 (420)
Q Consensus       337 m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~---Vy~~p~g----Ris~a-gl~~~ni  408 (420)
                      +.++....|+.+.+.|+..|    +..+.+..+.|++..++.+.+++|.++..   +.+.+.|    ||++. ..|+++|
T Consensus       255 ~~~~~~~~~~~~~~~l~~~g----~~~~~p~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vR~s~~~~~t~edi  330 (340)
T d1svva_         255 LGAHSNKMAAILKAGLEACG----IRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKEC  330 (340)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT----CCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHH
T ss_pred             HHHHHHHHHhhhHHHHhcCC----CeeecCCCceEEEEeCCHHHHHHHHHhhhhhcccccCCCCcEEEEECCCCCCHHHH
Confidence            34567777888889999988    66666666778888888888888877644   3445554    88764 3588999


Q ss_pred             HHHHHHHHHH
Q psy16707        409 GYLAKAIHAV  418 (420)
Q Consensus       409 ~~la~AI~~v  418 (420)
                      |+++++|+++
T Consensus       331 d~~l~~l~~l  340 (340)
T d1svva_         331 HRFVEVLKRL  340 (340)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999999874

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.57  E-value=5e-08  Score=95.08  Aligned_cols=104  Identities=16%  Similarity=0.115  Sum_probs=68.8

Q ss_pred             HHHHHccCCCCceeecccccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCcee
Q psy16707        151 TEAFKKDTNVNKINLGVGAYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLIS  230 (420)
Q Consensus       151 ~~~~~~d~~~~kInL~iG~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~  230 (420)
                      .+..++..+...+|++-+.     +.+++.+...++.        ...|.|..|.++++++.++.+-+..     .+.  
T Consensus        11 ~~~i~~~g~~~i~~~~gl~-----~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~-----~e~--   70 (366)
T d2aeua1          11 LEILNEKGRDALYDLSGLS-----GGFLIDEKDKALL--------NTYIGSSYFAEKVNEYGLKHLGGDE-----NDK--   70 (366)
T ss_dssp             HHHHHHTCGGGCEECSSCC-----CCCCCCHHHHHHH--------TSTTHHHHHHHHHHHHHHHHHTCCT-----TEE--
T ss_pred             HHHhchhccchHhhhccCC-----CCCCccHHHHHHH--------HHhcCchhhHHHHHHHHHHHccCCC-----ccE--
Confidence            3445555556678886543     4456665554432        1224455678889998888775543     122  


Q ss_pred             eecccCCCCccccccccccceeecccchHHHHHHHHHHHhcCCCCCEE-EEc-CCCCCCcHHHHhhcCcc
Q psy16707        231 IVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNFFPGEKVI-YVP-TPTWGNHIPICKHTGLE  298 (420)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~~p~gd~V-lvp-dP~w~ny~~i~~~aG~~  298 (420)
                                          ++.|.||+.|+..+...|   .| ++.| ++| .|+|+.|...++.+|++
T Consensus        71 --------------------~~~~~~~~~a~~~~l~al---~~-~~~vi~~~~~~~~~~~~~~~~l~g~~  116 (366)
T d2aeua1          71 --------------------CVGFNRTSSAILATILAL---KP-KKVIHYLPELPGHPSIERSCKIVNAK  116 (366)
T ss_dssp             --------------------EEEESSHHHHHHHHHHHH---CC-SEEEEECSSSSCCTHHHHHHHHTTCE
T ss_pred             --------------------EEEeCCHHHHHHHHHHHh---CC-CCEEEEecCCCcchhHHHHHHhcCCe
Confidence                                267999999998877544   36 5555 455 59999999999999986

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.28  E-value=3.6e-07  Score=84.29  Aligned_cols=75  Identities=15%  Similarity=0.043  Sum_probs=53.4

Q ss_pred             hHHHHHHHHHHHccCCCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchH
Q psy16707        180 LPSVKQADEIVLNKNLDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTG  259 (420)
Q Consensus       180 ~~~V~~a~~~~~~~~~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtg  259 (420)
                      .|.|++|.....  ..+.-|.+.....+|.+.++++ +|.+       .+                      +.++|||.
T Consensus        13 ~p~v~~A~~~a~--~g~~~yg~~p~~~~le~~lA~~-~G~~-------~~----------------------~~~~sGt~   60 (343)
T d1m6sa_          13 TEEMRKAMAQAE--VGDDVYGEDPTINELERLAAET-FGKE-------AA----------------------LFVPSGTM   60 (343)
T ss_dssp             CHHHHHHHHTCC--CCCGGGTCCHHHHHHHHHHHHH-TTCS-------EE----------------------EEESCHHH
T ss_pred             CHHHHHHHHhhh--cCCcccCCCHHHHHHHHHHHHH-HCCC-------eE----------------------EEeCCHHH
Confidence            456887765432  2456688877888999999986 4643       12                      56889999


Q ss_pred             HHHHHHHHHHhcCCCCCEEEEcCCCCCCcH
Q psy16707        260 SLRVGAAFLKNFFPGEKVIYVPTPTWGNHI  289 (420)
Q Consensus       260 al~~~~~~l~~~~p~gd~VlvpdP~w~ny~  289 (420)
                      |...+...+  +.+ ||.++++.+.+..+.
T Consensus        61 A~~~al~a~--~~~-g~~~~~~~~~~~~~~   87 (343)
T d1m6sa_          61 GNQVSIMAH--TQR-GDEVILEADSHIFWY   87 (343)
T ss_dssp             HHHHHHHHH--CCT-TCEEEEETTCHHHHS
T ss_pred             HHHHHHHHH--hcc-CCceeccccccceee
Confidence            988877644  446 899999998776544

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=98.15  E-value=6.8e-06  Score=78.76  Aligned_cols=80  Identities=16%  Similarity=0.231  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccc---CCCCceEEec---CCCHHHHHHHHHhCCeEEeC----CC-cEEEccc
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT---GLNATQVEKLIKEHSVYLTK----DG-RISMAGV  403 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i---~~q~GmF~~~---~l~~~~v~~Ll~e~~Vy~~p----~g-Ris~agl  403 (420)
                      +...++..++++.+.+.|++++.   +..+   .++.|++++.   ..+.+.+.+++++.||++..    +. |||+...
T Consensus       287 ~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~  363 (381)
T d1elua_         287 EERYQAICQRSEFLWRGLNQLPH---VHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYI  363 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTT---EEESCSSCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTT
T ss_pred             ccchhhhhhHHHHHHHHHhcCCC---eEecCCCCccccEEEEEcCCCCCHHHHHHHHHhCCcEEEecCCCCEEEEecCCC
Confidence            34456777888899999998741   2222   3466777653   33455555566889998742    22 9998644


Q ss_pred             -CCCCHHHHHHHHHH
Q psy16707        404 -TSKNVGYLAKAIHA  417 (420)
Q Consensus       404 -~~~ni~~la~AI~~  417 (420)
                       +.++|+++.++|++
T Consensus       364 nt~edid~ll~~l~e  378 (381)
T d1elua_         364 TDEEEINHLLARLAD  378 (381)
T ss_dssp             CCHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHh
Confidence             46889999999876

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=6.4e-05  Score=72.20  Aligned_cols=99  Identities=21%  Similarity=0.178  Sum_probs=69.4

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccCCCCCCC-CCCC-----------CHHHHHHHHHHHcCCCCccccCCceeeecccC
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYA-PIIG-----------APDFGKLAAQLAYGEDCPQLKDNLISIVQGIS  236 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~-p~~G-----------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~  236 (420)
                      +|.|..+..++++.|.+|.......  ...|. |..+           +.+.|+.+++++ |.+     ++.|       
T Consensus         4 iYlD~aa~~p~~~~v~ea~~~~~~~--~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~l-g~~-----~~~I-------   68 (391)
T d1p3wa_           4 IYLDYSATTPVDPRVAEKMMQFMTM--DGTFGNPASRSHRFGWQAEEAVDIARNQIADLV-GAD-----PREI-------   68 (391)
T ss_dssp             EECBTTTCCCCCHHHHHHHHTTTST--TSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHH-TCC-----GGGE-------
T ss_pred             EEeeCccccCCCHHHHHHHHHHHHh--ccccCCCchhhhHHHHHHHHHHHHHHHHHHHHc-CCC-----CCcE-------
Confidence            4899999899999999998776532  23443 3322           235677788765 543     3444       


Q ss_pred             CCCccccccccccceeecccchHHHHHHHHHHHh--cCCCCCEEEEcCCCCCCcHHHHhhc---Ccc
Q psy16707        237 GTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKN--FFPGEKVIYVPTPTWGNHIPICKHT---GLE  298 (420)
Q Consensus       237 ~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~--~~p~gd~VlvpdP~w~ny~~i~~~a---G~~  298 (420)
                                     +.|.|+|.++..++..+..  ..| ||+|+++++.|+++...++.+   |++
T Consensus        69 ---------------~~~~~~t~~l~~~~~~~~~~~~~~-gd~Vv~~~~~~~s~~~~~~~~~~~G~~  119 (391)
T d1p3wa_          69 ---------------VFTSGATESDNLAIKGAANFYQKK-GKHIITSKTEHKAVLDTCRQLEREGFE  119 (391)
T ss_dssp             ---------------EEESSHHHHHHHHHHHHHHHHGGG-CCEEEEETTSCHHHHHHHHHHHHTTCE
T ss_pred             ---------------EEECCHHHHHHHHHhhhhhhhcCC-CCEEEEeccccchHHHHHHHHHHcCCE
Confidence                           5699999998877754332  346 999999999999988777643   554

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.81  E-value=0.00096  Score=63.21  Aligned_cols=97  Identities=13%  Similarity=0.052  Sum_probs=65.7

Q ss_pred             ccccCCCCCCchHHHHHHHHHHHccCCCCCCCCCCC-----------CHHHHHHHHHHHcCCCCccccCCceeeecccCC
Q psy16707        169 AYRDDQGKPYVLPSVKQADEIVLNKNLDKEYAPIIG-----------APDFGKLAAQLAYGEDCPQLKDNLISIVQGISG  237 (420)
Q Consensus       169 ~y~d~dg~~~~~~~V~~a~~~~~~~~~~~~Y~p~~G-----------~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~  237 (420)
                      .|.|..|-.++++.|.+|......+    .|..+.|           +.+.|+.+++++ |.+     ++.|        
T Consensus         3 iyld~a~~~~~p~~v~ea~~~~~~~----~~~np~~~~~~~~~~~~~~~~aR~~ia~l~-~~~-----~~~i--------   64 (376)
T d1eg5a_           3 VYFDNNATTRVDDRVLEEMIVFYRE----KYGNPNSAHGMGIEANLHMEKAREKVAKVL-GVS-----PSEI--------   64 (376)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHT----CCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TSC-----GGGE--------
T ss_pred             EEEECcccccCCHHHHHHHHHHHHH----cCCCCccccHHHHHHHHHHHHHHHHHHHHc-CCC-----CCcE--------
Confidence            4888888888999999997776643    1222222           234466777654 543     3334        


Q ss_pred             CCccccccccccceeecccchHHHHHHHHHH--HhcCCCCCEEEEcCCCCCCcHHHHhhc---Ccc
Q psy16707        238 TGSLRVGAAFQISIVQGISGTGSLRVGAAFL--KNFFPGEKVIYVPTPTWGNHIPICKHT---GLE  298 (420)
Q Consensus       238 ~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l--~~~~p~gd~VlvpdP~w~ny~~i~~~a---G~~  298 (420)
                                    +.+.|+|.++..++..+  ....+ |+.|++++..++++....+.+   |++
T Consensus        65 --------------~~~~~~T~~l~~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~  115 (376)
T d1eg5a_          65 --------------FFTSCATESINWILKTVAETFEKR-KRTIITTPIEHKAVLETMKYLSMKGFK  115 (376)
T ss_dssp             --------------EEESCHHHHHHHHHHHHHHHTTTT-CCEEEECTTSCHHHHHHHHHHHHTTCE
T ss_pred             --------------EEECCHHHHHHhhhhccccccccc-CcccccccccchhhHHHHHHHHhcCCE
Confidence                          56899999988876432  22334 899999999999999877644   664

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=97.78  E-value=5.7e-05  Score=68.70  Aligned_cols=76  Identities=16%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCCCHHHHHHHHHhCCeEEeCC--C----cEEEc-ccCCCCHHHH
Q psy16707        339 DRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSVYLTKD--G----RISMA-GVTSKNVGYL  411 (420)
Q Consensus       339 ~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~--g----Ris~a-gl~~~ni~~l  411 (420)
                      .+..+.+..+.+.|.+.+.   .....+..+.+++..++.+.+++|+ +.||.+.++  +    ||++. ..|+++||.+
T Consensus       262 ~~~~~~~~~~~~~l~~~~g---~~~~~p~~~niv~~~~~~~~~~~L~-~~gi~v~~~~~~~~~lR~~~~~~~T~edid~~  337 (345)
T d1v72a1         262 RKANAAAQRLAQGLEGLGG---VEVLGGTEANILFCRLDSAMIDALL-KAGFGFYHDRWGPNVVRFVTSFATTAEDVDHL  337 (345)
T ss_dssp             HHHHHHHHHHHHHHTTCTT---EEEESCCCSSEEEEEECHHHHHHHH-HTTCBCBCSSSSTTEEEEECCTTCCHHHHHHH
T ss_pred             cchhhHHHHHHHHHHhcCC---cEeccCCCccEEEEEcCHHHHHHHH-HcCCCccccCCCCCEEEEECCCCCCHHHHHHH
Confidence            3444555566667776542   3334455667778778888888885 557766432  2    88874 3478889999


Q ss_pred             HHHHHHH
Q psy16707        412 AKAIHAV  418 (420)
Q Consensus       412 a~AI~~v  418 (420)
                      .++|+++
T Consensus       338 le~lr~a  344 (345)
T d1v72a1         338 LNQVRLA  344 (345)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9999875

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.69  E-value=0.0002  Score=67.06  Aligned_cols=44  Identities=7%  Similarity=-0.098  Sum_probs=36.3

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.|.|||.|+.+++.-+  +.| ||.|++++|+|+.....++.+|++
T Consensus        66 ~~t~g~t~a~~~~~~al--~~~-gd~Vi~~~~~h~s~~~~~~~~g~~  109 (364)
T d2e7ja1          66 RVTNGAREAKFAVMHSL--AKK-DAWVVMDENCHYSSYVAAERAGLN  109 (364)
T ss_dssp             EEESSHHHHHHHHHHHH--CCT-TCEEEEETTCCHHHHHHHHHTTCE
T ss_pred             EEECcHHHHHHHHHHHH--hCC-CcEEEeecccccccchHHHhccce
Confidence            56999999998887644  558 999999999998777777888874

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.31  E-value=0.0023  Score=59.76  Aligned_cols=86  Identities=16%  Similarity=0.152  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec-----CCCHHHHHHHHHhCCeEEeCCC-------cEEEc
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQVEKLIKEHSVYLTKDG-------RISMA  401 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-----~l~~~~v~~Ll~e~~Vy~~p~g-------Ris~a  401 (420)
                      .+.+..+.+...+.+.+.++..|.......-.+..++.++.     +.+.+.+...+.+.||.+.+|+       |||..
T Consensus       260 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~Ris~~  339 (361)
T d1m32a_         260 VAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNI  339 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCCCCCHHHHHHHHHHCCcEEECCCcCCCCEEEEeCC
Confidence            44555677777788888888887432111101123444432     3444444344478899886542       99954


Q ss_pred             -ccCCCCHHHHHHHHHHHh
Q psy16707        402 -GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       402 -gl~~~ni~~la~AI~~vv  419 (420)
                       ..+.++|+++.+||++++
T Consensus       340 g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         340 GEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             SSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHc
Confidence             478999999999999875

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.0067  Score=58.35  Aligned_cols=86  Identities=13%  Similarity=0.214  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe--cCCCHHHHHHHHHhCCeEEeC---------------C-
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY--TGLNATQVEKLIKEHSVYLTK---------------D-  395 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~--~~l~~~~v~~Ll~e~~Vy~~p---------------~-  395 (420)
                      .+.+.++.....+.+.+.++..+.-... ......|.+++  -+.+.+.+..+++++||.+..               + 
T Consensus       298 ~~~i~~~~~~L~~~~~~~l~~~~~~~~~-~~~~r~~ivsf~~~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~  376 (405)
T d1jf9a_         298 LNNIAEYEQNLMHYALSQLESVPDLTLY-GPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAM  376 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTEEEE-SCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCE
T ss_pred             hHHHHHHHHHHHHHHHhhhhcCCccccc-CCcCcCcEEEEEcCCCCHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCE
Confidence            4444555566666667777665421100 11234566665  356677776667999999852               2 


Q ss_pred             CcEEEccc-CCCCHHHHHHHHHHHhC
Q psy16707        396 GRISMAGV-TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 gRis~agl-~~~ni~~la~AI~~vv~  420 (420)
                      -|||+.-- +.++|+++.++|+++.|
T Consensus       377 iRiS~~~ynt~eDid~l~~~l~~i~r  402 (405)
T d1jf9a_         377 CRASLAMYNTHEEVDRLVTGLQRIHR  402 (405)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            29998754 45789999999998754

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=97.28  E-value=0.0038  Score=60.99  Aligned_cols=79  Identities=20%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCc-eEEecCCCH---HHHHHHHHhCCeEEeC-------CC----cEEE
Q psy16707        336 GMADRIISMRQSLKDNLQKEGSNKPWNHITDQIG-MFCYTGLNA---TQVEKLIKEHSVYLTK-------DG----RISM  400 (420)
Q Consensus       336 ~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~G-mF~~~~l~~---~~v~~Ll~e~~Vy~~p-------~g----Ris~  400 (420)
                      ..+.+++..-..+.+.|.+.|.+    ....+.- ...++|.+.   +..++|++++|||+.+       -|    ||++
T Consensus       301 ~~r~~l~~~~~~~~~~l~~~g~~----~~~~~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l  376 (396)
T d2bwna1         301 KLRDAQQMHAKVLKMRLKALGMP----IIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTP  376 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCC----BCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC----cCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEe
Confidence            34455666666677778888853    2222222 234566543   3446788899999854       22    7777


Q ss_pred             ccc-CCCCHHHHHHHHHHH
Q psy16707        401 AGV-TSKNVGYLAKAIHAV  418 (420)
Q Consensus       401 agl-~~~ni~~la~AI~~v  418 (420)
                      +.- +.++|++++++++++
T Consensus       377 sa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         377 SPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             CTTSCHHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHh
Confidence            655 677899999999875

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=97.23  E-value=0.0017  Score=61.74  Aligned_cols=53  Identities=9%  Similarity=0.009  Sum_probs=38.5

Q ss_pred             CceEEecCCCHHHHHHHHHhCCeEEe---CCC-cEEEcc--cCCCCHHHHHHHHHHHhC
Q psy16707        368 IGMFCYTGLNATQVEKLIKEHSVYLT---KDG-RISMAG--VTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       368 ~GmF~~~~l~~~~v~~Ll~e~~Vy~~---p~g-Ris~ag--l~~~ni~~la~AI~~vv~  420 (420)
                      .|..++...+.+.+..-+.+.||++.   |+. |||++.  -|.++|++++++|+++++
T Consensus       341 ~~~vsf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~  399 (404)
T d1qz9a_         341 GSHVSFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILD  399 (404)
T ss_dssp             CSEEEEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEecCCHHHHHHHHHHCCCEEeecCCCeEEEECCCCCCCHHHHHHHHHHHHHHHH
Confidence            56666655556655444479999874   343 999974  467999999999999863

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=97.18  E-value=0.00065  Score=66.33  Aligned_cols=107  Identities=18%  Similarity=0.402  Sum_probs=77.8

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-----
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-----   87 (420)
                      ..+++++..-..+++.++.+.....+|.+   +++.+++..|..+.+.|++.|    ++.+.-+-|||.+.-|++     
T Consensus       298 ~~~~~~~~~~~~~~~a~l~~~~~~~~~~~---~~~~~~~~~~~~l~~~L~~~g----i~~~~p~gg~f~w~~l~~~~~~~  370 (431)
T d1m7ya_         298 SSFGLVSSQTQHLLSAMLSDKKLTKNYIA---ENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSN  370 (431)
T ss_dssp             GGGSCCCHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGSSSS
T ss_pred             hccccccccccchhhhhhccchhhhhhhh---hhhhhhhhhhhhhhhhhhcCC----cEEecCCceeEEEEECccccccC
Confidence            44556666666677777777776666654   568889999999999998754    667778889999987743     


Q ss_pred             ------HHHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         88 ------TQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        88 ------~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                            +-+++|.++++|++.+        .|  ||++|.+.+++++.-.+.|.+
T Consensus       371 ~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~~~e~~l~~al~rL~~  425 (431)
T d1m7ya_         371 TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKA  425 (431)
T ss_dssp             SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCcCCHHHHHHHHHHHHH
Confidence                  3467888899999864        45  899888877666555444443

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=97.12  E-value=0.02  Score=54.98  Aligned_cols=87  Identities=14%  Similarity=0.306  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCC---cccCCCCceEEe--cCCCHHHHHHHHHhCCeEEeCC-------------
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPW---NHITDQIGMFCY--TGLNATQVEKLIKEHSVYLTKD-------------  395 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w---~~i~~q~GmF~~--~~l~~~~v~~Ll~e~~Vy~~p~-------------  395 (420)
                      .+.+.++..+..+.+.+.+++.+.-.-+   .......|..++  -+.+.+.+...++++||.+..|             
T Consensus       297 ~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~  376 (408)
T d1t3ia_         297 MENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDA  376 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEEEEeCCCCHHHHHHHHhhCCcEEecCcccccHHHHhhcC
Confidence            3455566677777788877765421000   111223455443  5777777766669999997532             


Q ss_pred             -C--cEEEccc-CCCCHHHHHHHHHHHhC
Q psy16707        396 -G--RISMAGV-TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       396 -g--Ris~agl-~~~ni~~la~AI~~vv~  420 (420)
                       |  |||+.-. |.++|++++++|++++|
T Consensus       377 ~g~vRiS~~~ynt~~did~li~~L~~~~~  405 (408)
T d1t3ia_         377 SGSARASLYFYNTKEEIDLFLQSLQATIR  405 (408)
T ss_dssp             CCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CccEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence             2  9998854 57789999999999874

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00098  Score=63.21  Aligned_cols=84  Identities=19%  Similarity=0.231  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC----CCceEEe-c--CCCH-HHHHHHHHhCCeEEeCC-----C---c
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGMFCY-T--GLNA-TQVEKLIKEHSVYLTKD-----G---R  397 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~----q~GmF~~-~--~l~~-~~v~~Ll~e~~Vy~~p~-----g---R  397 (420)
                      ++.+..+..+..+.+++.++..|...   .+..    ..+..++ +  +.+. +++++|++++||.+..|     |   |
T Consensus       281 ~~~~~~~~~~l~~~l~~~~~~~g~~~---~~~~~~~rs~~i~~~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iR  357 (388)
T d1h0ca_         281 LENSWRQHREAAAYLHGRLQALGLQL---FVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLR  357 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCB---SSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEE
T ss_pred             cccccccccchhHHHHHHHhhcCccc---ccCCHHHcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEeCCchhhcCCEEE
Confidence            66777888888888999998887421   1111    1233332 2  4555 45589999999998764     1   9


Q ss_pred             EE-Ec-ccCCCCHHHHHHHHHHHhC
Q psy16707        398 IS-MA-GVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       398 is-~a-gl~~~ni~~la~AI~~vv~  420 (420)
                      || +. ..+.++|+++.++|+++++
T Consensus       358 is~~g~~~t~edid~li~aL~~~L~  382 (388)
T d1h0ca_         358 IGLLGCNATRENVDRVTEALRAALQ  382 (388)
T ss_dssp             EECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99 53 3456789999999999874

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.06  E-value=0.0068  Score=56.85  Aligned_cols=45  Identities=18%  Similarity=0.241  Sum_probs=39.2

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.+||.|+.+++..+ .+.| ||+|++|+.+|+.....+..+|++
T Consensus        50 i~~~sgt~Al~~al~al-~~~~-gdeVi~~~~~~~~~~~ai~~~g~~   94 (376)
T d1mdoa_          50 VAVSSATAGMHIALMAL-GIGE-GDEVITPSMTWVSTLNMIVLLGAN   94 (376)
T ss_dssp             EEESCHHHHHHHHHHHT-TCCT-TCEEEEESSSCHHHHHHHHHTTCE
T ss_pred             EEeCCHHHHHHHHHHHh-CCCC-CCEEEEecccccccccchhccccc
Confidence            56889999999998754 3567 999999999999999999999886

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.04  E-value=0.02  Score=53.64  Aligned_cols=85  Identities=20%  Similarity=0.226  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC---CCceEEecCCCHHHHHHHHHhCCeEEeCCC---------cEEEc
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITD---QIGMFCYTGLNATQVEKLIKEHSVYLTKDG---------RISMA  401 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~---q~GmF~~~~l~~~~v~~Ll~e~~Vy~~p~g---------Ris~a  401 (420)
                      ++....|.++.++.+.+.+.+...-........   ..++..+...+.+.+..+++++||.+..|.         ||+.-
T Consensus       277 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~~~~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~  356 (382)
T d2bkwa1         277 LHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHM  356 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCC
T ss_pred             hhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcEEEEcCCCHHHHHHHHHHCCeEEECCCChhhcCCEEEEeCC
Confidence            444456666777778777765321000111111   224455444466667667789999998751         99843


Q ss_pred             cc--CCCCHHHHHHHHHHH
Q psy16707        402 GV--TSKNVGYLAKAIHAV  418 (420)
Q Consensus       402 gl--~~~ni~~la~AI~~v  418 (420)
                      |.  ++++|+++.+++..+
T Consensus       357 G~~~~~e~i~~l~~~l~~i  375 (382)
T d2bkwa1         357 GVTACNKNLPYMKNCFDLI  375 (382)
T ss_dssp             GGGTSSTTCTHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHH
Confidence            33  467899999988765

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=97.03  E-value=0.007  Score=59.02  Aligned_cols=71  Identities=17%  Similarity=0.224  Sum_probs=46.5

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHcCCCCccccCCceeeecccCCCCccccccccccceeecccchHHHHHHHHHHHhc---
Q psy16707        195 LDKEYAPIIGAPDFGKLAAQLAYGEDCPQLKDNLISIVQGISGTGSLRVGAAFQISIVQGISGTGSLRVGAAFLKNF---  271 (420)
Q Consensus       195 ~~~~Y~p~~G~~~fr~a~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vqt~gGtgal~~~~~~l~~~---  271 (420)
                      .+..|.+..+..+|.+++++++ |.+       .+                      +.+.+||.|..+++..+.+.   
T Consensus        67 gd~~y~~~~~~~~le~~~a~l~-g~~-------~~----------------------~~~~sGt~A~~~a~~~~~~~g~~  116 (465)
T d1ax4a_          67 GDEAYAGSRNYYDLKDKAKELF-NYD-------YI----------------------IPAHQGRGAENILFPVLLKYKQK  116 (465)
T ss_dssp             CCCCSSSCHHHHHHHHHHHHHH-CCC-------EE----------------------EEESSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhccChHHHHHHHHHHHHH-CCC-------EE----------------------EECCCcHHHHHHHHHHHHHHHHh
Confidence            5567998888889999999865 654       22                      67899999998888766431   


Q ss_pred             --CCCCCEEEEcCCCCCCcHHHHhhcC
Q psy16707        272 --FPGEKVIYVPTPTWGNHIPICKHTG  296 (420)
Q Consensus       272 --~p~gd~VlvpdP~w~ny~~i~~~aG  296 (420)
                        .+ ...++.+++.|..+.......|
T Consensus       117 ~~~~-~~~~i~~~~h~~t~~~~~~~~g  142 (465)
T d1ax4a_         117 EGKA-KNPVFISNFHFDTTAAHVELNG  142 (465)
T ss_dssp             TTCC-SSCEEEESSCCHHHHHHHHHTT
T ss_pred             cCCC-CCeEEeccchhhhhHHHHHHcC
Confidence              11 2334556655555444444443

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=97.03  E-value=0.0012  Score=64.16  Aligned_cols=108  Identities=17%  Similarity=0.328  Sum_probs=77.9

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCH-----
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNA-----   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~-----   87 (420)
                      ..++.++.....++..+|.+.+...+|.   ++++++++..|+.+.+.|+..|    |..+.-+-|||.+.-|++     
T Consensus       295 ~~~~~~~~~~~~~~~a~l~~~~~~~~~~---~~~~~~l~~r~~~~~~~L~~~g----i~~~~p~gg~f~w~~l~~~~~~~  367 (428)
T d1iaya_         295 SSFGLVSTQTQYFLAAMLSDEKFVDNFL---RESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRPLLRES  367 (428)
T ss_dssp             HTTSCCCHHHHHHHHHHTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGGGCSSS
T ss_pred             hcccccccccccchhhhhhhhccccccc---cccccccchhHHHHHHHHHhCC----CEEecCCcceEEEEECccccccC
Confidence            3455556666666777888766555554   4567788888999999998754    667778899999987753     


Q ss_pred             ------HHHHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 ------TQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ------~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                            +-+++|.++++|++.+        .|  |||+|..++..++.-.+.|.++
T Consensus       368 ~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~l~~al~Rl~~~  423 (428)
T d1iaya_         368 TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF  423 (428)
T ss_dssp             SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence                  2366788899998853        34  9999888877777666666554

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=97.01  E-value=0.0054  Score=57.29  Aligned_cols=87  Identities=16%  Similarity=0.207  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe-c--CCCHHH-HHHHHHhCCeEEeCC------C--cEEEc
Q psy16707        334 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY-T--GLNATQ-VEKLIKEHSVYLTKD------G--RISMA  401 (420)
Q Consensus       334 l~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~-~--~l~~~~-v~~Ll~e~~Vy~~p~------g--Ris~a  401 (420)
                      ++.+..+.++..+.+++.|...|.....+.-....+.-++ +  +.+.++ +..|++++||.+..|      +  |||.-
T Consensus       277 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~  356 (377)
T d1vjoa_         277 LANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLM  356 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECC
T ss_pred             chHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEecCcccccCCEEEEecC
Confidence            4566678888888999999887743211100011223222 2  455554 578889999998653      2  99954


Q ss_pred             c-c-CCCCHHHHHHHHHHHhC
Q psy16707        402 G-V-TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       402 g-l-~~~ni~~la~AI~~vv~  420 (420)
                      | . +.++|+++.+++++++|
T Consensus       357 g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         357 GFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             GGGCSHHHHHHHHHHHHHHHC
T ss_pred             cCCCCHHHHHHHHHHHHHHhC
Confidence            4 3 45689999999999986

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.014  Score=56.19  Aligned_cols=79  Identities=14%  Similarity=0.307  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCce-EEecCCCH---HHHHHHHHhCCeEEeC-------CC----cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM-FCYTGLNA---TQVEKLIKEHSVYLTK-------DG----RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~Gm-F~~~~l~~---~~v~~Ll~e~~Vy~~p-------~g----Ris  399 (420)
                      +..+.++.+....+.+.|+++|    +.....+.-. +.++|.++   +..++| .+.|||+.+       -|    ||+
T Consensus       288 ~~~~~~l~~~~~~~~~~l~~~g----~~~~~~~s~Ii~v~~g~~~~a~~~~~~L-~~~Gi~v~~~~~PtVp~g~~~lRi~  362 (383)
T d1bs0a_         288 DARREKLAALITRFRAGVQDLP----FTLADSCSAIQPLIVGDNSRALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLT  362 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSS----CEECSCCSSBCCEEEESHHHHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC----CccCCCCCCEEEEEECCHHHHHHHHHHH-HHCCceEEEEcCCCCCCCCceEEEE
Confidence            3444677777888888898887    3333333222 23455433   334566 578999853       33    888


Q ss_pred             Eccc-CCCCHHHHHHHHHHH
Q psy16707        400 MAGV-TSKNVGYLAKAIHAV  418 (420)
Q Consensus       400 ~agl-~~~ni~~la~AI~~v  418 (420)
                      +... ++++|++++++|+.+
T Consensus       363 ~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         363 LTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CCTTCCHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHHHHHHHhc
Confidence            7754 778899999999874

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.77  E-value=0.0056  Score=57.94  Aligned_cols=114  Identities=17%  Similarity=0.185  Sum_probs=82.3

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-   83 (420)
                      .++.........+++.....++...|.++    .|.+.++.++.++...|..+.+.|...+    +....-+-|+|.+. 
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~fl~~~  323 (388)
T d1gdea_         252 ERMVKFQMYNATCPVTFIQYAAAKALKDE----RSWKAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPR  323 (388)
T ss_dssp             HHHHHHHHTTTCSCCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCB
T ss_pred             hhhhhccccccccccccchhhHHHHHhhc----cchhHHHHHHHHHHHhhhhhhhhhhhcc----ccccCCCceEEEEEE
Confidence            45566666777888888888888999886    4556678888888888999999998754    44566788999885 


Q ss_pred             ----CCCHHH-HHHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         84 ----GLNATQ-VEKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 ----gL~~~q-v~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                          +++.++ +++|.++++|.+.+        .|  |||++ .+.++++...+.|.++
T Consensus       324 l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~-~~~e~l~~al~rL~~~  381 (388)
T d1gdea_         324 IRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA-TAYEKLEEAMDRMERV  381 (388)
T ss_dssp             CGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHH
Confidence                566666 56677889998853        33  78885 5666655555555443

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0089  Score=57.96  Aligned_cols=80  Identities=15%  Similarity=0.302  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceE-EecCCCH---HHHHHHHHhCCeEEeC-------CC----cEE
Q psy16707        335 KGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMF-CYTGLNA---TQVEKLIKEHSVYLTK-------DG----RIS  399 (420)
Q Consensus       335 ~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF-~~~~l~~---~~v~~Ll~e~~Vy~~p-------~g----Ris  399 (420)
                      .++++++.+.-..|.+.+.+.|.    .....+.... ..++.+.   +..++| .+.|||+.+       -|    ||+
T Consensus       299 ~~~~~~l~~~~~~~~~~l~~~g~----~~~~~~~pIv~v~~~~~~~a~~~~~~L-~~~Gi~v~~i~~PtVp~g~~~lRi~  373 (401)
T d1fc4a_         299 SELRDRLWANARQFREQMSAAGF----TLAGADHAIIPVMLGDAVVAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQ  373 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC----CBCCSSSSEEEEEEECHHHHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhhcccCC----ccCCCCCCEEEEEECCHHHHHHHHHHH-HHCCceEEeECCCCCCCCCceEEEE
Confidence            44557777777778888888874    2223333333 3445433   344666 578999753       23    888


Q ss_pred             Ec-ccCCCCHHHHHHHHHHHh
Q psy16707        400 MA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       400 ~a-gl~~~ni~~la~AI~~vv  419 (420)
                      +. ..++++|++++++|++|.
T Consensus       374 ~~a~hT~edId~~v~al~ev~  394 (401)
T d1fc4a_         374 MSAAHTPEQITRAVEAFTRIG  394 (401)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCHHHHHHHHHHHHHHH
Confidence            84 568999999999999985

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=96.63  E-value=0.0017  Score=61.27  Aligned_cols=102  Identities=17%  Similarity=0.117  Sum_probs=72.0

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHh
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKE   96 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~   96 (420)
                      +++......+...|.+.    .+.+.++.++++++..|+.+.+.|++.|    |..+..+.|||.+..++..++..|-++
T Consensus       254 ~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~p~g~~~~~~~l~~~~~~~ll~~  325 (368)
T d1v2da_         254 SAPTPLQAGVAEALKLA----RREGFYEALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAELPGWDAFRLVEE  325 (368)
T ss_dssp             SCCHHHHHHHHHHHHHH----HHTTHHHHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEECTTCCHHHHHHH
T ss_pred             ccccccccccccccccc----cchhhHHHHHHHHHHhhhhhhhhHHhcC----cEEecCCceeEEEEeCCccHHHHHHHh
Confidence            33333334444555432    3445577788889999999999998864    667778889999999988888888899


Q ss_pred             cceEEcC----------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         97 HSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        97 ~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      ++|++.+          .|  ||+++. ++++++...+.|.++
T Consensus       326 ~gI~v~pg~~F~~~~~~~~~iRis~~~-~~e~i~~ai~rL~~~  367 (368)
T d1v2da_         326 ARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRV  367 (368)
T ss_dssp             TCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred             CCEEEEechhhCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHh
Confidence            9999853          23  888763 556666666666554

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.48  E-value=0.012  Score=57.66  Aligned_cols=91  Identities=24%  Similarity=0.345  Sum_probs=65.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEe----cCCCHHHHHHHHHhCCeEEeC-----
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCY----TGLNATQVEKLIKEHSVYLTK-----  394 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p-----  394 (420)
                      |.+.|..+.+.+.+.+.+..+.|.+.|.+.|.    ..+..  ..=++..    .+++..++++++++.||.+-.     
T Consensus       270 l~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~----~vv~ggTd~H~vlvdl~~~~~~g~~ae~~Le~agI~~Nkn~iP~  345 (405)
T d1kl1a_         270 FGEALQDDFKAYAKRVVDNAKRLASALQNEGF----TLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPY  345 (405)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC----EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEECCCTT
T ss_pred             HHHHhChHHHHHHHHHHHHHHHHHHHHhcCCc----eeecCCCccceeeccccccCCcHHHHHHHHHHcCeEEcCCcCCC
Confidence            44556677788888888999999999999984    33321  2224442    367788888888999998862     


Q ss_pred             --------CC-cEEEccc-----CCCCHHHHHHHHHHHhC
Q psy16707        395 --------DG-RISMAGV-----TSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       395 --------~g-Ris~agl-----~~~ni~~la~AI~~vv~  420 (420)
                              +| ||.-..+     .++.+.++|+-|+++++
T Consensus       346 d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         346 DPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             CSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence                    23 8887654     55778999999998873

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=96.36  E-value=0.019  Score=53.87  Aligned_cols=46  Identities=11%  Similarity=0.219  Sum_probs=35.9

Q ss_pred             CCCH-HHHHHHHHhCCeEEeCC------C--cEE-EcccC-CCCHHHHHHHHHHHhC
Q psy16707        375 GLNA-TQVEKLIKEHSVYLTKD------G--RIS-MAGVT-SKNVGYLAKAIHAVTK  420 (420)
Q Consensus       375 ~l~~-~~v~~Ll~e~~Vy~~p~------g--Ris-~agl~-~~ni~~la~AI~~vv~  420 (420)
                      |.+. +.+..|++++||.+.+|      +  ||| +.-.| .++|+++.+||+++++
T Consensus       324 g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~  380 (388)
T d2ch1a1         324 GVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLK  380 (388)
T ss_dssp             TCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHH
Confidence            5665 55588889999999764      2  999 55565 5789999999999874

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=96.11  E-value=0.0028  Score=61.17  Aligned_cols=119  Identities=12%  Similarity=0.053  Sum_probs=77.7

Q ss_pred             HHHHHhhccCCCccchHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQE-ILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~-IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      ++..+.+....++|......+.. +.++....+...+-++.++++++..|+.|++.|++.|    |....-|-|||.+.-
T Consensus       265 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~P~gg~f~~~~  340 (418)
T d2r5ea1         265 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVAD  340 (418)
T ss_dssp             HHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHTT----CEEEECSBSSEEEEE
T ss_pred             hhhhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhhcC----CcccCCCceeEEEEE
Confidence            44444444444444444444444 4333333333344566788899999999999998864    666778999998854


Q ss_pred             CC-----------------HHHHHHHHHhcceEEcCC-------------C--ceecccCCcCCHHHHHHHHHhh-CC
Q psy16707         85 LN-----------------ATQVEKLIKEHSVYLTKD-------------G--RISMAGVTSKNVGYLAKAIHAN-GS  129 (420)
Q Consensus        85 L~-----------------~~qv~~L~~~~~IY~~~~-------------G--Rinvagl~~~ni~~va~ai~~v-~~  129 (420)
                      ++                 .+=++.|.++++|.+++.             |  |||++. ..++++.-.+.|.+. ||
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~-~~e~l~~a~~rl~~~lg~  417 (418)
T d2r5ea1         341 WSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-KDENLQKAAEILRKWKGS  417 (418)
T ss_dssp             CGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCS-CHHHHHHHHHHHHHHHTC
T ss_pred             cccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEEecC-CHHHHHHHHHHHHHHHcc
Confidence            32                 133567788999988653             2  899864 778888888888776 54

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=96.06  E-value=0.0071  Score=57.79  Aligned_cols=109  Identities=12%  Similarity=0.069  Sum_probs=75.2

Q ss_pred             HHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC---
Q psy16707          8 KILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG---   84 (420)
Q Consensus         8 ~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g---   84 (420)
                      ..+.....++++..+...+...+.+      |.+.++.+++++++.|..+++.|++..   .|....-|-|||.+.-   
T Consensus       260 ~~~~~~~~~~~~~~~q~a~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~p~gg~~l~~~l~~  330 (388)
T d1j32a_         260 TKIQGHSTSNVCTFAQYGAIAAYEN------SQDCVQEMLAAFAERRRYMLDALNAMP---GLECPKPDGAFYMFPSIAK  330 (388)
T ss_dssp             HHHHHTTTCSCCHHHHHHHHHHHHS------CSHHHHHHHHHHHHHHHHHHHHHHTCT---TCBCCCCCBTTEECCBCGG
T ss_pred             HHhhhhccccccHHHHHHHhhcccc------hHHHHHHHHHHHHHHHHHHHHHHHhCC---CCEecCCCceEEEEEECCC
Confidence            3444455667777777766666654      345577788889999999999998753   3677778899999864   


Q ss_pred             --CCHHH-HHHHHHhcceEEcC------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         85 --LNATQ-VEKLIKEHSVYLTK------DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        85 --L~~~q-v~~L~~~~~IY~~~------~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                        .+..+ +++|.++++|++.+      +|  |||++ .+.++++.-.+.|.+
T Consensus       331 ~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~-~~~e~l~~al~rl~~  382 (388)
T d1j32a_         331 TGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA-TDLDTIKRGMERLEK  382 (388)
T ss_dssp             GTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC-SCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEe-CCHHHHHHHHHHHHH
Confidence              44444 47788899999974      23  88986 466665554444444

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0029  Score=61.14  Aligned_cols=117  Identities=15%  Similarity=0.141  Sum_probs=82.2

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPK-LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT   83 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~-L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~   83 (420)
                      +.++.+.+....++|.....++...|.+.. ...+|.+.+..++++++..|+.|.+.|++.|    |+...-+-|+|.+.
T Consensus       264 ~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g----~~~~~P~gg~f~~~  339 (418)
T d1w7la_         264 KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPLIPQGSYFLIT  339 (418)
T ss_dssp             HHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTT----CEEEECSBSSEEEE
T ss_pred             hhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhcC----CcccCCCceeEEEE
Confidence            455666666666777776666666666544 5666788899999999999999999998764    66667788999887


Q ss_pred             CCC------------------HHHHHHHHHhcceEEcC-------------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         84 GLN------------------ATQVEKLIKEHSVYLTK-------------DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        84 gL~------------------~~qv~~L~~~~~IY~~~-------------~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                      -++                  .+-+++|-++++|.+++             .|  ||+++ .+.++++..++.|.+
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~-~~~~~l~~a~~rl~~  414 (418)
T d1w7la_         340 DISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV-KDEATLQAMDEKLRK  414 (418)
T ss_dssp             ECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC-CCHHHHHHHHHHHHH
T ss_pred             ECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEc-CCHHHHHHHHHHHHH
Confidence            553                  45677888899998753             12  45554 355555555555543

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=95.88  E-value=0.008  Score=57.20  Aligned_cols=116  Identities=10%  Similarity=0.114  Sum_probs=81.2

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec--
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT--   83 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~--   83 (420)
                      .+..+.+....+++..+..+++.++.+..    +.+.++.+++++...|+.+.+.|.+.... ...+..-+-|||.+.  
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~~~p~gg~~~~~~~  337 (403)
T d1wsta1         263 KMEIAKQSIDLCTNTFGQAIAWKYVENGY----LDEHIPKIIEFYKPRRDAMLEALEEYMPE-GVEWTKPEGGMFVRVTL  337 (403)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHTTH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TCEECCCSBSSEEEEEC
T ss_pred             HHHHHHhhhccccccchhhhHHhhhhccc----cchhHHHHHHHHHHHHHHHHHHHHhhccC-CeEEeCCCceeEEEEEC
Confidence            34555566677788877777777776543    34556777788888899999999876543 244556688999988  


Q ss_pred             --CCCHHHHHHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         84 --GLNATQVEKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        84 --gL~~~qv~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                        |.+.+.+..+-.+++|++.+          .|  ||+++.+++++++...+.|.+
T Consensus       338 ~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~  394 (403)
T d1wsta1         338 PEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAE  394 (403)
T ss_dssp             CTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence              55566666666678998853          13  899988888887765555544

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=95.83  E-value=0.0059  Score=58.70  Aligned_cols=117  Identities=14%  Similarity=0.140  Sum_probs=79.4

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccccccccceeec-
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSN-KPWNHITDQIGMFCYT-   83 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~-~~w~~i~~Q~GmFs~~-   83 (420)
                      .+.........++|......++.++.+.    .|.+.++.++++++..|..+.+.|++.... ..+....-+-|||.+. 
T Consensus       275 ~l~~~~~~~~~~~~~~~q~~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~  350 (420)
T d1vp4a_         275 KIVQAKQSADLCSPAITHRLAARYLERY----DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLT  350 (420)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHS----CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEE
T ss_pred             hhhhhhhhccccCchhhhhhhhhhcccc----cccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEE
Confidence            4444444555667777778888877654    366777888888888888888888876433 2466666788999987 


Q ss_pred             ---CCCHHHHHHHHHhcceEEcC----------CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         84 ---GLNATQVEKLIKEHSVYLTK----------DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        84 ---gL~~~qv~~L~~~~~IY~~~----------~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                         |++.+++..+-++++|.+.+          .|  |||++..+..+++.-++.|.+
T Consensus       351 ~~~~~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~e~l~~a~~rL~~  408 (420)
T d1vp4a_         351 LPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLRE  408 (420)
T ss_dssp             CCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeCcCCHHHHHHHHHHHHH
Confidence               45565666555788998742          12  888888777665554444443

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=95.77  E-value=0.056  Score=52.85  Aligned_cols=84  Identities=13%  Similarity=0.254  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC--CCCceEEe----cCCCHHHHHHHHHhCCeEEeC-----------
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT--DQIGMFCY----TGLNATQVEKLIKEHSVYLTK-----------  394 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~--~q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p-----------  394 (420)
                      .+.+.+.+++.+..+.|.+.|.+.|.    ..+.  ...-++..    .+++..+++.++++.||.+-.           
T Consensus       281 ~~fk~Y~~qvv~NA~~La~~L~~~G~----~iv~ggTdnHlvlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~  356 (416)
T d1dfoa_         281 PEFKTYQQQVAKNAKAMVEVFLERGY----KVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPF  356 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTC----EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCc----ccccCCCCCceeEEEecccCCCHHHHHHHHHHcCeEEeCCcCCCCCCCCC
Confidence            34456667788888899999999984    3332  12224432    367788999999999999742           


Q ss_pred             --CC-cEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707        395 --DG-RISMAGV-----TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 --~g-Ris~agl-----~~~ni~~la~AI~~vv  419 (420)
                        +| ||.-..+     .++.++++|+-|++++
T Consensus       357 ~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l  389 (416)
T d1dfoa_         357 VTSGIRVGTPAITRRGFKEAEAKELAGWMCDVL  389 (416)
T ss_dssp             TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence              23 8887655     4477899999999886

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.65  E-value=0.12  Score=51.25  Aligned_cols=92  Identities=20%  Similarity=0.247  Sum_probs=63.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEe----cCCCHHHHHHHHHhCCeEEeC-------
Q psy16707        326 LKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCY----TGLNATQVEKLIKEHSVYLTK-------  394 (420)
Q Consensus       326 L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p-------  394 (420)
                      +++.+..+.+.+.+++.+.-+.|.+.|.+.|.+- ..--+ ..=++.+    .|++..++++++++.||.+-.       
T Consensus       302 ~~ea~~~~fk~Ya~qvv~NAk~La~~L~~~G~~v-~~ggT-dnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~  379 (470)
T d1rv3a_         302 LKQAMTPEFKEYQRQVVANCRALSAALVELGYKI-VTGGS-DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDK  379 (470)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEE-GGGSC-SSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCS
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcee-ccCCC-CCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCC
Confidence            3344445667777888888889999999988431 00111 2224442    378889999999999999853       


Q ss_pred             -----CC-cEEEcc-----cCCCCHHHHHHHHHHHh
Q psy16707        395 -----DG-RISMAG-----VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 -----~g-Ris~ag-----l~~~ni~~la~AI~~vv  419 (420)
                           +| ||.-..     +.++++.++|+-|++++
T Consensus       380 ~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~~l  415 (470)
T d1rv3a_         380 SALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGI  415 (470)
T ss_dssp             CTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence                 23 887664     45677889999998876

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=95.59  E-value=0.044  Score=53.79  Aligned_cols=71  Identities=17%  Similarity=0.188  Sum_probs=46.6

Q ss_pred             HHHHHHHHHhcCCCCCCcccCCCCceEEec-------CCC------HHHHHHHHHhCCeEEeCC----------------
Q psy16707        345 RQSLKDNLQKEGSNKPWNHITDQIGMFCYT-------GLN------ATQVEKLIKEHSVYLTKD----------------  395 (420)
Q Consensus       345 R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~-------~l~------~~~v~~Ll~e~~Vy~~p~----------------  395 (420)
                      .+.|.+.|++.|.+    .+.+..|.+.++       .+.      .+.+..|..+.||...+.                
T Consensus       322 ~~~L~e~L~~~g~~----vv~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~  397 (456)
T d1c7ga_         322 VRYLGDKLREAGVP----IVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHR  397 (456)
T ss_dssp             HHHHHHHHHHTTCC----BCSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCC
T ss_pred             HHHHHHHHHhccCC----cccCCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccC
Confidence            35788889998853    455556655542       111      245667778899976431                


Q ss_pred             -----CcEEEc--ccCCCCHHHHHHHHHHHh
Q psy16707        396 -----GRISMA--GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       396 -----gRis~a--gl~~~ni~~la~AI~~vv  419 (420)
                           -|+++.  ..+.+.|||++++|.+|+
T Consensus       398 ~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~  428 (456)
T d1c7ga_         398 PKLETVRLTIPRRVYTYAHMDVVADGIIKLY  428 (456)
T ss_dssp             CSCCEEEEECCTTSCCHHHHHHHHHHHHHHH
T ss_pred             CccceEEEecCcccCCHHHHHHHHHHHHHHH
Confidence                 167764  236677999999999985

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=95.37  E-value=0.096  Score=49.28  Aligned_cols=104  Identities=14%  Similarity=0.159  Sum_probs=60.6

Q ss_pred             cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC----CCceEEe-cCCCHHH
Q psy16707        306 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD----QIGMFCY-TGLNATQ  380 (420)
Q Consensus       306 ~s~pp~~ga~iv~~IL~dp~L~~~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~----q~GmF~~-~~l~~~~  380 (420)
                      ..+||.+........|.  .+.+++.++    ..+.+..+..+.+.+++.|.    ..++.    ..-.|.+ -|.+.+.
T Consensus       227 ~~Tp~v~~i~~l~~aL~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~gl----~~~~~~~s~~v~~~~~P~g~~~~~  296 (348)
T d1iuga_         227 AWTPAINLVLAVAAVLE--EVLPRLEEH----LALKAWQNALLYGVGEEGGL----RPVPKRFSPAVAAFYLPEGVPYAR  296 (348)
T ss_dssp             SSCCCHHHHHHHHHHHH--HHGGGHHHH----HHHHHHHHHHHHHHHHHTTC----EESCSSBCTTCEEEECCTTCCHHH
T ss_pred             cccccchHHHHHHHHHH--HHHHHHhHH----HHHHHHHHHHHhhhhhhhhh----ccChhhcCCeEEEEECCCCCCHHH
Confidence            44778777765555442  222333222    23334445556666666663    22221    1123333 3667766


Q ss_pred             HHHHHHhCCeEEeCC-----C---cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        381 VEKLIKEHSVYLTKD-----G---RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       381 v~~Ll~e~~Vy~~p~-----g---Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                      +...++++||.+.+|     |   ||+.-| .+.++++++.++|++++
T Consensus       297 ~~~~l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l  344 (348)
T d1iuga_         297 VKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVL  344 (348)
T ss_dssp             HHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            655558899999886     2   887654 57778888888888775

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=95.09  E-value=0.049  Score=51.32  Aligned_cols=114  Identities=15%  Similarity=0.170  Sum_probs=76.0

Q ss_pred             HHHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecC
Q psy16707          5 NAKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTG   84 (420)
Q Consensus         5 ~~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~g   84 (420)
                      .++..+......++|.....++...+.+......|.+   .+++..+..|+.+.+.|.+.+    |+.+.-|-|+|.+.-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g----~~~~~p~gg~~~~~~  326 (382)
T d1b5pa_         254 KAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVE---MAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMD  326 (382)
T ss_dssp             HHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEE
T ss_pred             HHHHHHHHhcccCcccccccccccccccccchhHHHH---HHHHHHHhhhhHHHHHHhhcC----CeEecCCceEEEeEe
Confidence            3455566667777888777777777777666555544   556667777888888887765    455667889998874


Q ss_pred             C-----CHHHHHHHHHhcceEEcCC------C--ceecccCCcCCHHHHHHHHHh
Q psy16707         85 L-----NATQVEKLIKEHSVYLTKD------G--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        85 L-----~~~qv~~L~~~~~IY~~~~------G--Rinvagl~~~ni~~va~ai~~  126 (420)
                      +     +.+++..+-.+++|.+.+.      |  |||++ ...++++.-.+.|.+
T Consensus       327 ~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~-~~~e~l~~al~rl~~  380 (382)
T d1b5pa_         327 TSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFAR  380 (382)
T ss_dssp             CTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGG
T ss_pred             CCCCCCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEEEc-CCHHHHHHHHHHHHH
Confidence            4     4566655556779887642      2  78875 466665555554443

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.98  E-value=0.032  Score=53.15  Aligned_cols=99  Identities=14%  Similarity=0.168  Sum_probs=65.1

Q ss_pred             cCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC--------
Q psy16707         14 FYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL--------   85 (420)
Q Consensus        14 ~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL--------   85 (420)
                      .+++++...+.++...+.+      |.+.+..++++++..|..+.+.|.+..   .|+...-+-|||.+.-+        
T Consensus       285 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~r~~~~~~l~~~~---g~~~~~p~gg~~l~~~~~~~~~~~~  355 (412)
T d1bw0a_         285 VCGPCTVVQAALGEALLNT------PQEHLDQIVAKIEESAMYLYNHIGECI---GLAPTMPRGAMYLMSRIDLEKYRDI  355 (412)
T ss_dssp             HTCSCHHHHHHHHHHHHSS------CHHHHHHHHHHHHHHHHHHHHHHTTST---TEEECCCCBTTEEEEEECGGGBSSC
T ss_pred             ccCCchhhhhhcccccccc------cccccccccchhHHHHHHHHHHHHHhc---CceecCCCCceEEEEeCChhhcCCC
Confidence            3344444444444444443      456677889999999999999996532   37777788899987533        


Q ss_pred             -C-HHHHHHHHHhcceEEcC------CC--ceecccCCcCCHHHHHHHHH
Q psy16707         86 -N-ATQVEKLIKEHSVYLTK------DG--RISMAGVTSKNVGYLAKAIH  125 (420)
Q Consensus        86 -~-~~qv~~L~~~~~IY~~~------~G--Rinvagl~~~ni~~va~ai~  125 (420)
                       + .+-+++|-++++|++++      .|  |||++. .   .+.+.+|+.
T Consensus       356 ~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~-~---~e~l~eal~  401 (412)
T d1bw0a_         356 KTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-P---VEVYREAVE  401 (412)
T ss_dssp             CSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-C---HHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcC-C---HHHHHHHHH
Confidence             2 24477888899999975      34  888752 3   345555544

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=94.74  E-value=0.023  Score=53.71  Aligned_cols=108  Identities=14%  Similarity=0.075  Sum_probs=71.0

Q ss_pred             HHHHHhhccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC
Q psy16707          6 AKKILIRAFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL   85 (420)
Q Consensus         6 ~l~~i~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL   85 (420)
                      ++..+.-...+++|......+...|.+++   +|   ++.|++++++.|..|.+.+...+    |....-|-|||.+.-+
T Consensus       253 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~~~~~g----~~~~~p~gg~~~~~~~  322 (382)
T d1u08a_         253 EIRKVHQYLTFSVNTPAQLALADMLRAEP---EH---YLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDY  322 (382)
T ss_dssp             HHHHHHHHHTSSCCHHHHHHHHHHHHHCT---HH---HHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEEC
T ss_pred             HHHhhhcccccccccccccccccccccch---HH---HHHHHHHHHhhhhhhhhhhccCC----cEEecCCceEEEEEec
Confidence            34444444556777777777777776542   34   56778888999999988875433    6667789999998533


Q ss_pred             ------CH-HHHHHHHHhcceEEcC--------CC----ceecccCCcCCHHHHHHHHHhh
Q psy16707         86 ------NA-TQVEKLIKEHSVYLTK--------DG----RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ------~~-~qv~~L~~~~~IY~~~--------~G----Rinvagl~~~ni~~va~ai~~v  127 (420)
                            +. +-+++|-++++|.+++        .|    |||++ .+.   +.+-+|+...
T Consensus       323 ~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~-~~~---e~l~~al~RL  379 (382)
T d1u08a_         323 SAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA-KKE---STLLAAAERL  379 (382)
T ss_dssp             TTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC-SCH---HHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEe-CCH---HHHHHHHHHH
Confidence                  33 3466787899997753        23    88875 233   5555665543

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=94.28  E-value=0.12  Score=51.13  Aligned_cols=86  Identities=13%  Similarity=0.252  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCC--CCceEEe----cCCCHHHHHHHHHhCCeEEeC---------
Q psy16707        330 WLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITD--QIGMFCY----TGLNATQVEKLIKEHSVYLTK---------  394 (420)
Q Consensus       330 w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~--q~GmF~~----~~l~~~~v~~Ll~e~~Vy~~p---------  394 (420)
                      ...+.+.+.+++.+.-+.|.+.|.+.|.    ..+..  ..=++..    .+++-.+++..+++.||.+-.         
T Consensus       302 ~~~~fk~Ya~qVv~NAk~La~~L~~~G~----~vv~ggTdnHlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~  377 (463)
T d2a7va1         302 CTPMFREYSLQVLKNARAMADALLERGY----SLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSA  377 (463)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHHHTTC----EEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCS
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhCCC----eeecCCCCCceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCC
Confidence            3456677778888888899999999884    33321  1123332    256778898889999999853         


Q ss_pred             ---CC-cEEEccc-----CCCCHHHHHHHHHHHh
Q psy16707        395 ---DG-RISMAGV-----TSKNVGYLAKAIHAVT  419 (420)
Q Consensus       395 ---~g-Ris~agl-----~~~ni~~la~AI~~vv  419 (420)
                         +| ||.-..+     .++++.++|+-|++++
T Consensus       378 ~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~~l  411 (463)
T d2a7va1         378 ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV  411 (463)
T ss_dssp             SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence               23 8877654     4577899999998875

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.21  E-value=0.056  Score=51.33  Aligned_cols=93  Identities=13%  Similarity=0.163  Sum_probs=60.5

Q ss_pred             CCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC------C-H
Q psy16707         15 YSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL------N-A   87 (420)
Q Consensus        15 yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL------~-~   87 (420)
                      .++++..+...+...|.++   .+|   ++.+++.++..|+.+.+.|++.+   .+....-|-|+|.+.-+      + .
T Consensus       272 ~~~~~~~~q~a~~~~l~~~---~~~---~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~p~gg~~~~~~l~~~~~~~~~  342 (395)
T d1xi9a_         272 RLCPNTPAQFAAIAGLTGP---MDY---LKEYMKKLKERRDYIYKRLNEIP---GISTTKPQGAFYIFPKIEVGPWKNDK  342 (395)
T ss_dssp             TCCSCSHHHHHHHHHHHSC---CHH---HHHHHHHHHHHHHHHHHHHHTST---TEECCCCCBSSEECCEECSCSCSSHH
T ss_pred             CCCcCHHHHHHHHHHhcCC---HHH---HHHHHHHHHHHHHHHHHHHHhCC---CceecCCCeeEEEeEECCCCCCCCHH
Confidence            4556666666666666654   245   44466678888999999998753   24444557789887533      2 3


Q ss_pred             HHHHHHHHhcceEEcC--------CC--ceecccCCcCCH
Q psy16707         88 TQVEKLIKEHSVYLTK--------DG--RISMAGVTSKNV  117 (420)
Q Consensus        88 ~qv~~L~~~~~IY~~~--------~G--Rinvagl~~~ni  117 (420)
                      +-++.|-++++|++.+        .|  |||++ .+.+++
T Consensus       343 ~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~-~~~e~l  381 (395)
T d1xi9a_         343 EFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEIL  381 (395)
T ss_dssp             HHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHH
T ss_pred             HHHHHHHHhCCEEEEcChhhCCCCCCEEEEEec-CCHHHH
Confidence            4467788899999854        34  77774 344443

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=94.09  E-value=0.13  Score=48.60  Aligned_cols=107  Identities=15%  Similarity=0.129  Sum_probs=62.9

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNA   87 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~   87 (420)
                      ...++|+.....+++.... . --.+|.+++.   +.+.+.|+.+.+.|+..+.  .+....-+-|+|.+.     |.+.
T Consensus       267 ~~~~~~~~~~~~~a~~~~~-~-~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~--~~~~~~p~g~~~~~~~~~~~~~~~  339 (394)
T d1c7na_         267 ATSGMPFTTLGYKACEICY-K-ECGKWLDGCI---KVIDKNQRIVKDFFEVNHP--EIKAPLIEGTYLQWIDFRALKMDH  339 (394)
T ss_dssp             HTTCCCCCHHHHHHHHHHH-H-HCHHHHHHHH---HHHHHHHHHHHHHHHHHCT--TSBCCCCSBSSEEEEECGGGCCCH
T ss_pred             hccccccccccchhhhhhh-c-chhhhhcccc---cccchhhhhhhhhhhcccc--ceeecCCCceeEEEEECCCCCCCH
Confidence            3444555554444443322 1 2245655544   4455556666666665543  244445577888873     7788


Q ss_pred             HHH-HHHHHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         88 TQV-EKLIKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        88 ~qv-~~L~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      +++ ++|.++++|.+.+        .|  |||++ .+..+|+.-.+.|.++
T Consensus       340 ~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~-~~~e~i~eal~rl~~~  389 (394)
T d1c7na_         340 KAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA-APSSVIQESLERLNKA  389 (394)
T ss_dssp             HHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHH
Confidence            876 6788999998864        23  88885 5666665555544443

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=94.06  E-value=0.43  Score=45.61  Aligned_cols=49  Identities=18%  Similarity=0.273  Sum_probs=36.2

Q ss_pred             EEecCCCHHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCHHHHHHHHHHHh
Q psy16707        371 FCYTGLNATQVEKLIKEHSVYLTKDG----RISMA-GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       371 F~~~~l~~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni~~la~AI~~vv  419 (420)
                      ++..|++..++..+++++||.+...+    |++++ +.+.+++++|.+|+.+..
T Consensus       403 ~~~~G~~~~~~~~~L~~~gI~~e~~~~~~i~~~~s~~~T~edid~li~aL~ei~  456 (462)
T d1c4ka2         403 YEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQ  456 (462)
T ss_dssp             ECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             hhhcCCcHHHHHHHHHHcCCeeeccCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence            34457788888667789999875433    66664 457889999999998864

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.30  E-value=0.21  Score=46.30  Aligned_cols=85  Identities=18%  Similarity=0.194  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCC-ccccccccceee---cCCCHHHH-HHHHHhcceEEcC-----CC---ceec
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPW-NHITDQIGMFCY---TGLNATQV-EKLIKEHSVYLTK-----DG---RISM  109 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w-~~i~~Q~GmFs~---~gL~~~qv-~~L~~~~~IY~~~-----~G---Rinv  109 (420)
                      ++.+..|...+...+++.++..+..--. +.=.+-.++.+|   -|++.+++ +.|.++|+|.+..     .|   ||+.
T Consensus       281 ~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~  360 (388)
T d1h0ca_         281 LENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGL  360 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEEC
T ss_pred             cccccccccchhHHHHHHHhhcCcccccCCHHHcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeC
Confidence            7888999999999999999876532211 111122345444   37888776 7888999987642     22   7773


Q ss_pred             ccC--CcCCHHHHHHHHHhh
Q psy16707        110 AGV--TSKNVGYLAKAIHAN  127 (420)
Q Consensus       110 agl--~~~ni~~va~ai~~v  127 (420)
                      -|.  +..+||++++||.++
T Consensus       361 ~g~~~t~edid~li~aL~~~  380 (388)
T d1h0ca_         361 LGCNATRENVDRVTEALRAA  380 (388)
T ss_dssp             CGGGCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHH
Confidence            343  457899999999987

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=93.01  E-value=0.22  Score=45.96  Aligned_cols=84  Identities=13%  Similarity=0.228  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----CCCHHH-HHHHHHhcceEEc------CC
Q psy16707         37 AQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----GLNATQ-VEKLIKEHSVYLT------KD  104 (420)
Q Consensus        37 ~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----gL~~~q-v~~L~~~~~IY~~------~~  104 (420)
                      .+|.++   ++..+.+.|+.+.+.+.+....  +....-+-|||.+.     +.+.++ +++|.++++|++.      .+
T Consensus       256 ~~~~~~---~~~~~~~r~~~~~~~~~~~~~~--~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~v~pG~~F~~~  330 (361)
T d1d2fa_         256 APWLDA---LRIYLKDNLTYIADKMNAAFPE--LNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEE  330 (361)
T ss_dssp             HHHHHH---HHHHHHHHHHHHHHHHHHHCSS--CCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGG
T ss_pred             chhhhc---ccccchhhHHHHHHHhhhhccc--ccccccCceeEEEEEccCCCCCHHHHHHHHHHhCCEEEEeccccCCC
Confidence            345444   4445555566666666554442  44455678999875     456655 4568899999985      22


Q ss_pred             C----ceecccCCcCCHHHHHHHHHh
Q psy16707        105 G----RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus       105 G----Rinvagl~~~ni~~va~ai~~  126 (420)
                      |    |||++ .+.++++.-.+.|.+
T Consensus       331 ~~~~vRis~~-~~~e~l~~al~rl~~  355 (361)
T d1d2fa_         331 GRGFVRLNAG-CPRSKLEKGVAGLIN  355 (361)
T ss_dssp             GTTEEEEECC-SCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEc-CCHHHHHHHHHHHHH
Confidence            3    88875 677775554444443

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=92.87  E-value=2.2  Score=37.90  Aligned_cols=44  Identities=14%  Similarity=0.026  Sum_probs=33.1

Q ss_pred             CCCHHHHHHHHHhCCeEEeCC----C--cEEEcc-cCCCCHHHHHHHHHHH
Q psy16707        375 GLNATQVEKLIKEHSVYLTKD----G--RISMAG-VTSKNVGYLAKAIHAV  418 (420)
Q Consensus       375 ~l~~~~v~~Ll~e~~Vy~~p~----g--Ris~ag-l~~~ni~~la~AI~~v  418 (420)
                      +...+.+..++++.||.+.+|    |  |||+-+ .+.++|++|.+++++.
T Consensus       305 ~~~~~~~~~~l~~~Gi~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~  355 (360)
T d1bjna_         305 SALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEF  355 (360)
T ss_dssp             GGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHCCCEeecCCCccCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            344555555668999998775    2  999855 3678999999999874

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=92.44  E-value=0.15  Score=48.27  Aligned_cols=45  Identities=18%  Similarity=0.227  Sum_probs=39.7

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.+||.|+.+++..+ .+.| ||+|++|..+|+.....+..+|++
T Consensus        53 v~~~SGt~Al~lal~~l-~~~~-gdeVi~p~~t~~a~~~ai~~~g~~   97 (384)
T d1b9ha_          53 LAVTNGTHALELALQVM-GVGP-GTEVIVPAFTFISSSQAAQRLGAV   97 (384)
T ss_dssp             EEESCHHHHHHHHHHHT-TCCT-TCEEEEESSSCTHHHHHHHHTTCE
T ss_pred             EEeCCHHHHHHHHHHHc-CCCC-CCEEEEeccccccccccccccccc
Confidence            67999999999998755 3567 999999999999999999999986

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=92.28  E-value=0.083  Score=49.39  Aligned_cols=45  Identities=9%  Similarity=0.026  Sum_probs=39.8

Q ss_pred             eecccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.+||.|+.+++..+ .+.| ||+|++|.-+|+.....+..+|++
T Consensus        40 ~~~~SgT~Al~lal~~l-~~~~-gdeVi~p~~t~~a~~~~~~~~g~~   84 (374)
T d1o69a_          40 LALNSATAALHLALRVA-GVKQ-DDIVLASSFTFIASVAPICYLKAK   84 (374)
T ss_dssp             EEESCHHHHHHHHHHHT-TCCT-TCEEEEESSSCGGGTHHHHHTTCE
T ss_pred             EEeCCHHHHHHHHHHHc-CCCC-cCEEEeCCcchHhhHHHHhhccce
Confidence            67999999999998765 3666 999999999999999999999986

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=92.21  E-value=3.7  Score=37.04  Aligned_cols=41  Identities=15%  Similarity=0.139  Sum_probs=32.4

Q ss_pred             HHHHHHHHHhCCeEEeCC-----C-cEEEccc-CCCCHHHHHHHHHHH
Q psy16707        378 ATQVEKLIKEHSVYLTKD-----G-RISMAGV-TSKNVGYLAKAIHAV  418 (420)
Q Consensus       378 ~~~v~~Ll~e~~Vy~~p~-----g-Ris~agl-~~~ni~~la~AI~~v  418 (420)
                      .+.+..+++++||++.+|     | |||+-+- +.++|+.|+++|++-
T Consensus       309 ~~~~~~~L~~~GI~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~  356 (361)
T d2c0ra1         309 EKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHF  356 (361)
T ss_dssp             HHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEecCCCcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            456666668999999776     2 9997665 669999999999874

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=91.79  E-value=2.1  Score=40.04  Aligned_cols=44  Identities=16%  Similarity=0.211  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        254 GISGTGSLRVGAAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       254 t~gGtgal~~~~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      ..||+.++..++.......+ ++.|++|.-.-+.+...+..+|++
T Consensus       136 ~~~t~~~~~~~l~a~r~~~~-~~~vi~s~~~H~s~~k~~~~~g~~  179 (434)
T d2z67a1         136 PISTGMSISLCLSAARKKYG-SNVVIYPYASHKSPIKAVSFVGMN  179 (434)
T ss_dssp             SSCHHHHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHTTCE
T ss_pred             CcHHHHHHHHHHHHHHHhhc-CceEEEeccCCHHHHHHHHHhCCc
Confidence            34444444444443333335 799999988877666666677764

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=91.26  E-value=0.11  Score=48.52  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC---CHHHHHHHHHhcceEEcC------CC--ceeccc
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTK------DG--RISMAG  111 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL---~~~qv~~L~~~~~IY~~~------~G--Rinvag  111 (420)
                      ...++++++..|+.+.+.|++.+    |+.+.-+-|||.+.-+   +.+.+++|-++++|++.+      .|  ||+++ 
T Consensus       282 ~~~~~~~~~~r~~~~~~~l~~~g----~~~~~p~gg~f~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~-  356 (375)
T d1o4sa_         282 NSYMVQTFKERKNFVVERLKKMG----VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA-  356 (375)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT----CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC-
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcC----ceEecCCccEEEEEECCCCHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEc-
Confidence            34455667777888888888764    6666778899987644   467788888999999875      55  89986 


Q ss_pred             CCcCCHHHHHHHHHhh
Q psy16707        112 VTSKNVGYLAKAIHAN  127 (420)
Q Consensus       112 l~~~ni~~va~ai~~v  127 (420)
                      .+..+++...+.|.++
T Consensus       357 ~~~e~l~~al~rl~~~  372 (375)
T d1o4sa_         357 TSIERLTEALDRIEDF  372 (375)
T ss_dssp             SCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence            4666666666666654

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=91.18  E-value=1.3  Score=42.30  Aligned_cols=37  Identities=22%  Similarity=0.305  Sum_probs=28.7

Q ss_pred             HHHHHhCCeEEeCCC--c--EEEcccCCCCHHHHHHHHHHHhC
Q psy16707        382 EKLIKEHSVYLTKDG--R--ISMAGVTSKNVGYLAKAIHAVTK  420 (420)
Q Consensus       382 ~~Ll~e~~Vy~~p~g--R--is~agl~~~ni~~la~AI~~vv~  420 (420)
                      ..| .+.||++.|++  +  ++++ ++++.|+.+.+++++|++
T Consensus       385 ~~l-l~~Gv~l~p~~~~~~~~~l~-~Te~dId~~l~al~~al~  425 (427)
T d2gsaa_         385 RGM-LEQGIYLAPSQFEAGFTSLA-HTEEDIDATLAAARTVMS  425 (427)
T ss_dssp             HHH-HHTTEECCSSTTSCEECCTT-CCHHHHHHHHHHHHHHHT
T ss_pred             HHH-HHCCEEECCCCCcceeCCCC-CCHHHHHHHHHHHHHHHH
Confidence            445 47899999976  3  3444 688999999999999874

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.88  E-value=1.3  Score=40.01  Aligned_cols=110  Identities=17%  Similarity=0.194  Sum_probs=67.0

Q ss_pred             hhccCCCccchHHHHHHHHhCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeec-----
Q psy16707         11 IRAFYSSPPIHGARIVQEILGDPKLKAQWLTE--VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT-----   83 (420)
Q Consensus        11 ~R~~yS~PP~hGa~iv~~IL~~~~L~~~W~~e--l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~-----   83 (420)
                      .+....+||..........|.      .+.+|  .+.+..|++.....|.+.++..+.....+.=.+-.+++++.     
T Consensus       232 ~~~~~~t~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~  305 (361)
T d1m32a_         232 HGKWRFTSPTHTVLAFAQALK------ELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDP  305 (361)
T ss_dssp             TTCCSSCCCHHHHHHHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCT
T ss_pred             ccccCCCCCchhhhHHHHHHH------HHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCC
Confidence            455566777776655555442      12222  45667778888888888888776432222111224566664     


Q ss_pred             CCCHHH-HHHHHHhcceEEc-----CCC--ceeccc-CCcCCHHHHHHHHHhh
Q psy16707         84 GLNATQ-VEKLIKEHSVYLT-----KDG--RISMAG-VTSKNVGYLAKAIHAN  127 (420)
Q Consensus        84 gL~~~q-v~~L~~~~~IY~~-----~~G--Rinvag-l~~~ni~~va~ai~~v  127 (420)
                      +.+.+. ++.|. +.+|.+.     ..|  ||+.-| .|..+|+++.+||.++
T Consensus       306 ~~~~~~~~~~l~-~~gi~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~  357 (361)
T d1m32a_         306 QYRFSEFYRRLK-EQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTA  357 (361)
T ss_dssp             TCCHHHHHHHHH-HTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHH-HCCcEEECCCcCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            455555 45664 4555542     233  777543 7889999999999887

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=90.30  E-value=0.64  Score=43.05  Aligned_cols=77  Identities=8%  Similarity=0.060  Sum_probs=51.5

Q ss_pred             ccCCCccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCC----CHH
Q psy16707         13 AFYSSPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL----NAT   88 (420)
Q Consensus        13 ~~yS~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL----~~~   88 (420)
                      ..+.+++.....++..+|.+.   +.|   ++.++++.+..|..+.+.|++.+.   ..+...+.|||.+.-+    +.+
T Consensus       257 ~~~~~~~~~~~~~~~~~l~~~---~~~---~~~~~~~~~~~~~~~~~~L~~~~~---~~~~~p~~g~~~~~~lp~~~~~~  327 (389)
T d2gb3a1         257 QGRLAPPLLEQIGSVGLLNLD---DSF---FDFVRETYRERVETVLKKLEEHGL---KRFTKPSGAFYITAELPVEDAEE  327 (389)
T ss_dssp             HHSCCCCHHHHHHHHHHHTCC---HHH---HHHHHHHHHHHHHHHHHHHHHTTC---CCBCCCSBSSEEEEECSSSCHHH
T ss_pred             hcccccccccccccccccccc---chh---cccccccccccchhhhhhhhhhcc---ccccCCCceEEEEEeCCCCCHHH
Confidence            344555555666677777653   234   556677888899999999998753   2345568899998755    344


Q ss_pred             HHHHHHHhcc
Q psy16707         89 QVEKLIKEHS   98 (420)
Q Consensus        89 qv~~L~~~~~   98 (420)
                      -++.|.+++.
T Consensus       328 ~~~~ll~e~~  337 (389)
T d2gb3a1         328 FARWMLTDFN  337 (389)
T ss_dssp             HHHHHHHSCC
T ss_pred             HHHHHHHhhh
Confidence            5666767654

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=89.93  E-value=0.44  Score=43.56  Aligned_cols=85  Identities=18%  Similarity=0.271  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccc--eee-cCCCHHHH-HHHHHhcceEEc------CCC--ceecc
Q psy16707         43 VKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGM--FCY-TGLNATQV-EKLIKEHSVYLT------KDG--RISMA  110 (420)
Q Consensus        43 l~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~Gm--Fs~-~gL~~~qv-~~L~~~~~IY~~------~~G--Rinva  110 (420)
                      ++.+..|.+.....+++.|.+.+....-+.=.+-.++  |.+ -|++++++ ..|.++|+|.+.      ..+  ||+.-
T Consensus       277 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~  356 (377)
T d1vjoa_         277 LANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLM  356 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECC
T ss_pred             chHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEecCcccccCCEEEEecC
Confidence            4677888888888999999876543211111122333  444 37888888 578999999762      222  67655


Q ss_pred             cCC--cCCHHHHHHHHHhh
Q psy16707        111 GVT--SKNVGYLAKAIHAN  127 (420)
Q Consensus       111 gl~--~~ni~~va~ai~~v  127 (420)
                      |.+  ..+||.+++||.++
T Consensus       357 g~~~t~edi~~lv~al~~~  375 (377)
T d1vjoa_         357 GFNSRKESVDQLIPALEQV  375 (377)
T ss_dssp             GGGCSHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHH
Confidence            653  46799999999876

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.17  E-value=0.66  Score=42.36  Aligned_cols=95  Identities=15%  Similarity=0.281  Sum_probs=61.3

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHH---H-HH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ---V-EK   92 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~q---v-~~   92 (420)
                      +.+.....++...|.+.+       .++.+++++++-|+.|.+.|++.|    |..+ ...|.|.+.-++...   + +.
T Consensus       232 ~~s~~~~~~a~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~~~g----~~~~-~~~g~f~~~~~~~~~~~~~~~~  299 (334)
T d2f8ja1         232 NVSYVSQMFAKVALDHRE-------IFEERTKFIVEERERMKSALREMG----YRIT-DSRGNFVFVFMEKEEKERLLEH  299 (334)
T ss_dssp             CSCHHHHHHHHHHHHTHH-------HHHHHHHHHHHHHHHHHHHHHHHT----CEEC-CCCSSEEEEECCHHHHHHHHHH
T ss_pred             ccchhhhhhccccccccc-------chhhHHHHHHHHHHHHHHHHHHCC----CeEC-CCCceEEEEECCCCCHHHHHHH
Confidence            334445566667776633       344566778888999999998875    5444 445778776665433   2 34


Q ss_pred             HHHhcceEEcC-CC--ceecccCCcCCHHHHHHHHHh
Q psy16707         93 LIKEHSVYLTK-DG--RISMAGVTSKNVGYLAKAIHA  126 (420)
Q Consensus        93 L~~~~~IY~~~-~G--Rinvagl~~~ni~~va~ai~~  126 (420)
                      | .+++|.+.. .+  |||++  ++.+++.+.++|.+
T Consensus       300 L-~~~GI~vr~~~~~vRis~g--~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         300 L-RTKNVAVRSFREGVRITIG--KREENDMILRELEV  333 (334)
T ss_dssp             H-HHTTEECEEETTEEEEECC--CHHHHHHHHHHHHH
T ss_pred             H-HHCCCEECCCCCeEEEEcC--CHHHHHHHHHHHhc
Confidence            5 457887632 33  88874  56677888888764

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.42  E-value=1.2  Score=40.73  Aligned_cols=108  Identities=20%  Similarity=0.254  Sum_probs=70.2

Q ss_pred             hccCCCccchHHHHHHHHhCChhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCccccccccceeecCC
Q psy16707         12 RAFYSSPPIHGARIVQEILGDPKLKAQWL--TEVKGMADRIISMRQSLKDNLQKEGSN----KPWNHITDQIGMFCYTGL   85 (420)
Q Consensus        12 R~~yS~PP~hGa~iv~~IL~~~~L~~~W~--~el~~m~~Ri~~~R~~l~~~L~~~~~~----~~w~~i~~Q~GmFs~~gL   85 (420)
                      |....+||.++-.-...-|.       |.  +-+.....|.+.++..+.+.+.....-    ...+. ..-.++.++.+-
T Consensus       251 ~~~~~Tp~~~~i~al~~aL~-------~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~-~~s~~v~~~~~~  322 (382)
T d2bkwa1         251 GAYFATPPVQLINSLDVALK-------EILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSN-MSAHGLTAVYVA  322 (382)
T ss_dssp             CCCSSCCCHHHHHHHHHHHH-------HHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSST-TBCSSCEEEECS
T ss_pred             cccccCCcHHHHHHHHHHHH-------HHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchh-ccCCcEEEEcCC
Confidence            45667898877555444432       32  235666777777888888887642211    11111 123477888888


Q ss_pred             CHHHHHHHHHhcceEEcCC------C---ceecccCC--cCCHHHHHHHHHhh
Q psy16707         86 NATQVEKLIKEHSVYLTKD------G---RISMAGVT--SKNVGYLAKAIHAN  127 (420)
Q Consensus        86 ~~~qv~~L~~~~~IY~~~~------G---Rinvagl~--~~ni~~va~ai~~v  127 (420)
                      .++++..+.++|+|.+...      +   ||+--|.+  +.||+++.++|..+
T Consensus       323 ~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i  375 (382)
T d2bkwa1         323 DPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLI  375 (382)
T ss_dssp             CHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHH
Confidence            8999988888999987532      1   66645654  56899999999876

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=88.19  E-value=0.41  Score=43.92  Aligned_cols=97  Identities=10%  Similarity=0.094  Sum_probs=65.0

Q ss_pred             CccchHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHH---HHHHH
Q psy16707         17 SPPIHGARIVQEILGDPKLKAQWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNAT---QVEKL   93 (420)
Q Consensus        17 ~PP~hGa~iv~~IL~~~~L~~~W~~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~---qv~~L   93 (420)
                      +.+..+..++...|.|.    .|   +..++++++.-|+.+.+.|++.+.   |. +....|+|.++.+..+   =++.|
T Consensus       245 ~~~~~~~~~a~~~l~~~----~~---~~~~~~~~~~~~~~~~~~l~~~~~---~~-~~p~~~~f~~~~~~~~~~~~~~~L  313 (355)
T d1lc5a_         245 SVNALAALAGEVALQDS----AW---QQATWHWLREEGARFYQALCQLPL---LT-VYPGRANYLLLRCEREDIDLQRRL  313 (355)
T ss_dssp             CSCHHHHHHHHHGGGCH----HH---HHHHHHHHHHHHHHHHHHHHTSTT---EE-ECCCSSSEEEEEESCTTCCHHHHH
T ss_pred             ccccccccccccccccc----ch---hHHHHHHHHHHHHHHHHHHhhcCC---cE-ECCCCCEEEEEECCCCHHHHHHHH
Confidence            34455677777788873    23   344567777788888888887642   33 4456788888766532   34567


Q ss_pred             HHhcceEEcC--------CC--ceecccCCcCCHHHHHHHHHhh
Q psy16707         94 IKEHSVYLTK--------DG--RISMAGVTSKNVGYLAKAIHAN  127 (420)
Q Consensus        94 ~~~~~IY~~~--------~G--Rinvagl~~~ni~~va~ai~~v  127 (420)
                      + +++|.+.+        ++  ||++.  ++.+++.+.+|+.++
T Consensus       314 ~-~~gv~vr~~~~f~~~~~~~iRis~~--~~~e~~~li~aL~~i  354 (355)
T d1lc5a_         314 L-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNV  354 (355)
T ss_dssp             H-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             H-HCCcEEEeCccCCCCCCCEEEEEeC--CHHHHHHHHHHHHHh
Confidence            5 55888732        23  67763  678889999998875

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=86.33  E-value=1.7  Score=39.80  Aligned_cols=81  Identities=19%  Similarity=0.274  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCccc---cccccceeec--C-CCHHHH-HHHHHhcceEEc---CCC--ceeccc
Q psy16707         44 KGMADRIISMRQSLKDNLQKEGSNKPWNHI---TDQIGMFCYT--G-LNATQV-EKLIKEHSVYLT---KDG--RISMAG  111 (420)
Q Consensus        44 ~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i---~~Q~GmFs~~--g-L~~~qv-~~L~~~~~IY~~---~~G--Rinvag  111 (420)
                      +...+|...+++.|.+.|++...   +..+   ..+.|+++|.  | ...+.+ +.| ++.+|++.   ..|  ||++.-
T Consensus       287 ~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~vsf~~~~~~~~~~i~~~L-~~~gi~v~~~~~~~~lRis~~~  362 (381)
T d1elua_         287 EERYQAICQRSEFLWRGLNQLPH---VHCLATSAPQAGLVSFTVDSPLGHRAIVQKL-EEQRIYLRTIADPDCIRACCHY  362 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTT---EEESCSSCCSSSEEEEEECSSSCHHHHHHHH-HHTTEECEEETTTTEEEEECCT
T ss_pred             ccchhhhhhHHHHHHHHHhcCCC---eEecCCCCccccEEEEEcCCCCCHHHHHHHH-HhCCcEEEecCCCCEEEEecCC
Confidence            44457777888889999987531   1111   2467787764  3 444544 556 56788863   234  555544


Q ss_pred             C-CcCCHHHHHHHHHhhC
Q psy16707        112 V-TSKNVGYLAKAIHANG  128 (420)
Q Consensus       112 l-~~~ni~~va~ai~~v~  128 (420)
                      . +.++||++.++|.+.|
T Consensus       363 ~nt~edid~ll~~l~e~~  380 (381)
T d1elua_         363 ITDEEEINHLLARLADFG  380 (381)
T ss_dssp             TCCHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHhhC
Confidence            4 4589999999998764

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=85.60  E-value=1.1  Score=41.02  Aligned_cols=79  Identities=18%  Similarity=0.298  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHH--HHHHHHhcceEEcC-------CC--ceec
Q psy16707         41 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQ--VEKLIKEHSVYLTK-------DG--RISM  109 (420)
Q Consensus        41 ~el~~m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~q--v~~L~~~~~IY~~~-------~G--Rinv  109 (420)
                      .++....+++...|..|.+.|.+.+.   +..+....|+|.+.-+...+  .+.|. +++|++.+       +|  ||++
T Consensus       261 ~~~~~~~~~~~~~r~~l~~~l~~~~~---~~~~~p~~~~f~~~~~~~~~~~~~~L~-~~gIlvr~~~~~~~~~~~lRisi  336 (354)
T d1fg7a_         261 VAMRERVAQIIAEREYLIAALKEIPC---VEQVFDSETNYILARFKASSAVFKSLW-DQGIILRDQNKQPSLSGCLRITV  336 (354)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSTT---EEEECCCSSSEEEEEETTHHHHHHHHH-HTTEECEECTTSTTCTTEEEEEC
T ss_pred             ccccccchhhhhHHHHHHHHHHhCCC---cceeCCCCceEEEEeCCCHHHHHHHHH-HCCcEEecCCCCCCCCCEEEEEe
Confidence            44556667788889999999987653   34456678888887554432  34564 66998842       12  7776


Q ss_pred             ccCCcCCHHHHHHHHH
Q psy16707        110 AGVTSKNVGYLAKAIH  125 (420)
Q Consensus       110 agl~~~ni~~va~ai~  125 (420)
                      +  ++...+.+.+||.
T Consensus       337 g--t~ee~~~~l~aLk  350 (354)
T d1fg7a_         337 G--TREESQRVIDALR  350 (354)
T ss_dssp             C--CHHHHHHHHHHHH
T ss_pred             C--CHHHHHHHHHHHh
Confidence            3  5667788888876

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=85.40  E-value=16  Score=34.78  Aligned_cols=84  Identities=13%  Similarity=0.094  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEE----ecCCCHHHHHHHHHhCCeEEe-------CCCcEEE
Q psy16707        332 TEVKGMADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFC----YTGLNATQVEKLIKEHSVYLT-------KDGRISM  400 (420)
Q Consensus       332 ~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~----~~~l~~~~v~~Ll~e~~Vy~~-------p~gRis~  400 (420)
                      +-++++.++.......+.+.|.+.+.   +.. ..+.-+|-    -++.+.+.+.+.+.++|+...       +.+.+.+
T Consensus       340 ~GL~~ia~~a~~~A~yl~~~L~~~~g---~~~-~~~~~~f~ef~v~~~~~~~~i~k~L~d~G~~~~~~~~~~~~~~~lli  415 (437)
T d1wyua1         340 EGLREVALKSVEMAHKLHALLLEVPG---VRP-FTPKPFFNEFALALPKDPEAVRRALAERGFHGATPVPREYGENLALF  415 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSTT---CEE-CSCSSBCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSCSSEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCC---eec-cCCCCeeeEEEEECCCCHHHHHHHHHhCCCCCCcccccCCCCCeEEE
Confidence            45788888888888889999987631   332 22222332    246677777555578888631       1244444


Q ss_pred             cc---cCCCCHHHHHHHHHHHh
Q psy16707        401 AG---VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       401 ag---l~~~ni~~la~AI~~vv  419 (420)
                      +-   -+.+.||.+++++++|+
T Consensus       416 ~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         416 AATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHC
T ss_pred             ecCCCCCHHHHHHHHHHHHHhC
Confidence            42   24556999999999875

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=85.11  E-value=14  Score=34.67  Aligned_cols=81  Identities=12%  Similarity=0.225  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEec----CCCHHHHHHHHHhCCeEEeCCC---cEE--EcccCCCCH
Q psy16707        338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYT----GLNATQVEKLIKEHSVYLTKDG---RIS--MAGVTSKNV  408 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~----~l~~~~v~~Ll~e~~Vy~~p~g---Ris--~agl~~~ni  408 (420)
                      .++.+++-+.|.+.|+++..+ ++-.-....|++..+    +.+.+.+...+.++||++.+.|   ||+  + .++++.|
T Consensus       333 ~~~~~~~g~~l~~~L~~l~~~-~~v~~vrg~Gl~~~~e~~~~~~~~~~~~~~~~~Gl~~~~~g~~i~~~Ppl-~it~~ei  410 (429)
T d1s0aa_         333 QQQVADIEVQLREQLAPARDA-EMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPY-IILPQQL  410 (429)
T ss_dssp             HHHHHHHHHHHHHHHGGGGGC-TTEEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCBTTEEEECCCT-TCCHHHH
T ss_pred             cchhhHHHHHHHHHHHHhccC-CceEEEeecccEEEEEecCcccHHHHHHHHHHCCcEEEecCCEEEEeCCc-CCCHHHH
Confidence            355555666666677665321 121112345665532    2334555445568899999877   433  2 2689999


Q ss_pred             HHHHHHHHHHhC
Q psy16707        409 GYLAKAIHAVTK  420 (420)
Q Consensus       409 ~~la~AI~~vv~  420 (420)
                      +.+.++|+++++
T Consensus       411 d~~~~~l~~al~  422 (429)
T d1s0aa_         411 QRLTAAVNRAVQ  422 (429)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHH
Confidence            999999999864

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=84.92  E-value=0.95  Score=38.71  Aligned_cols=78  Identities=17%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCccccccccceeecCCCHHHHHHHHHhcce---EEcCCC----ceecc-cCCcCCH
Q psy16707         46 MADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGLNATQVEKLIKEHSV---YLTKDG----RISMA-GVTSKNV  117 (420)
Q Consensus        46 m~~Ri~~~R~~l~~~L~~~~~~~~w~~i~~Q~GmFs~~gL~~~qv~~L~~~~~I---Y~~~~G----Rinva-gl~~~ni  117 (420)
                      +.++....|..+.+.|++.+.    ..+..-.+-|.+..+..+-.++|.++..+   .....|    ||+++ ..++.+|
T Consensus       255 ~~~~~~~~~~~~~~~l~~~g~----~~~~p~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vR~s~~~~~t~edi  330 (340)
T d1svva_         255 LGAHSNKMAAILKAGLEACGI----RLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKEC  330 (340)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTC----CBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHH
T ss_pred             HHHHHHHHHhhhHHHHhcCCC----eeecCCCceEEEEeCCHHHHHHHHHhhhhhcccccCCCCcEEEEECCCCCCHHHH
Confidence            345556667777777877654    33333335567778889999999888553   334444    66653 4588999


Q ss_pred             HHHHHHHHhh
Q psy16707        118 GYLAKAIHAN  127 (420)
Q Consensus       118 ~~va~ai~~v  127 (420)
                      |.++++|.+|
T Consensus       331 d~~l~~l~~l  340 (340)
T d1svva_         331 HRFVEVLKRL  340 (340)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999999875

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=84.35  E-value=1.8  Score=41.13  Aligned_cols=41  Identities=15%  Similarity=0.204  Sum_probs=29.1

Q ss_pred             HHHHHHHHhCCeEEeCC---------------------CcEEEc--ccCCCCHHHHHHHHHHHh
Q psy16707        379 TQVEKLIKEHSVYLTKD---------------------GRISMA--GVTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       379 ~~v~~Ll~e~~Vy~~p~---------------------gRis~a--gl~~~ni~~la~AI~~vv  419 (420)
                      ..+..|+.++||.....                     -|+++.  ..+.+.||+++++|++|.
T Consensus       376 ~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~  439 (467)
T d2v1pa1         376 ALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVK  439 (467)
T ss_dssp             HHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence            34567788999865321                     177653  347788999999999875

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=83.95  E-value=3.9  Score=38.03  Aligned_cols=86  Identities=14%  Similarity=0.299  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCC---ccccccccc--eeecCCCHHHHHHHHHhcceEEcC-------------
Q psy16707         42 EVKGMADRIISMRQSLKDNLQKEGSNKPW---NHITDQIGM--FCYTGLNATQVEKLIKEHSVYLTK-------------  103 (420)
Q Consensus        42 el~~m~~Ri~~~R~~l~~~L~~~~~~~~w---~~i~~Q~Gm--Fs~~gL~~~qv~~L~~~~~IY~~~-------------  103 (420)
                      ..+.+++++..+.+.|.+.+++.....-+   ..-.++.|+  |++-|.+.+++...-++++|.+..             
T Consensus       296 g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~  375 (408)
T d1t3ia_         296 GMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFD  375 (408)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEEEEeCCCCHHHHHHHHhhCCcEEecCcccccHHHHhhc
Confidence            45778888888888888888754322111   112234566  455799988887666889998631             


Q ss_pred             -CC--ceecccCC-cCCHHHHHHHHHhh
Q psy16707        104 -DG--RISMAGVT-SKNVGYLAKAIHAN  127 (420)
Q Consensus       104 -~G--Rinvagl~-~~ni~~va~ai~~v  127 (420)
                       .|  |||+.-.| .++||+++++|.++
T Consensus       376 ~~g~vRiS~~~ynt~~did~li~~L~~~  403 (408)
T d1t3ia_         376 ASGSARASLYFYNTKEEIDLFLQSLQAT  403 (408)
T ss_dssp             CCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCccEEEECCCCCCHHHHHHHHHHHHHH
Confidence             12  77766555 57899999999876

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=83.31  E-value=1  Score=41.72  Aligned_cols=46  Identities=13%  Similarity=0.026  Sum_probs=37.1

Q ss_pred             eecccchHHHHHHHHHHHhcCC-CCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVGAAFLKNFFP-GEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~~~~l~~~~p-~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.+.+||.|+.+++..+. ..+ .+++|++|.-+|+.-...+..+|++
T Consensus        50 i~~~Sgt~Al~~al~al~-~~~~~~~eVi~p~~t~~a~~~ai~~~G~~   96 (371)
T d2fnua1          50 LVFNSATSALLTLYRNFS-EFSADRNEIITTPISFVATANMLLESGYT   96 (371)
T ss_dssp             EEESCHHHHHHHHHHHSS-CCCTTSCEEEECSSSCTHHHHHHHHTTCE
T ss_pred             EEEecHHHHHHHHHHHhc-ccCCCCCeeecccccccccceeeeccCcc
Confidence            679999999999987653 333 1358999999999888888889986

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.28  E-value=17  Score=33.36  Aligned_cols=47  Identities=19%  Similarity=0.037  Sum_probs=32.5

Q ss_pred             eecccchHHHHHH-HHHHHhcCCCCCEEEEcCCCCCCcHHHHhhcCcc
Q psy16707        252 VQGISGTGSLRVG-AAFLKNFFPGEKVIYVPTPTWGNHIPICKHTGLE  298 (420)
Q Consensus       252 vqt~gGtgal~~~-~~~l~~~~p~gd~VlvpdP~w~ny~~i~~~aG~~  298 (420)
                      +.|.|||++.-.+ +..+....+.++.|++|...+++....+..+|++
T Consensus       116 ~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~  163 (445)
T d3bc8a1         116 FVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFE  163 (445)
T ss_dssp             EEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCE
T ss_pred             cccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCe
Confidence            5788888654332 2222233344799999999998888888888875

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=82.52  E-value=21  Score=33.73  Aligned_cols=88  Identities=14%  Similarity=0.185  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-----CCCceEEec-------CCCHHHHHHHHHhCCeEE----
Q psy16707        329 QWLTEVKGMADRIISMRQSLKDNLQKEGSNKPWNHIT-----DQIGMFCYT-------GLNATQVEKLIKEHSVYL----  392 (420)
Q Consensus       329 ~w~~el~~m~~r~~~~R~~l~~~L~~~g~~~~w~~i~-----~q~GmF~~~-------~l~~~~v~~Ll~e~~Vy~----  392 (420)
                      .-.+-++.+.++..+..+.|.+.|++.+.   ++.+.     .....++|.       +++...+...+.+.|.++    
T Consensus       332 ~G~~G~~~~~~~~~~la~~l~~~L~~~~~---~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~  408 (450)
T d1pmma_         332 LGREGYTKVQNASYQVAAYLADEIAKLGP---YEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFT  408 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSC---EEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCC---eEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccC
Confidence            33456777778888888999999988762   34332     122345552       456666655557887544    


Q ss_pred             eC-CC------cEEEcc-cCCCCHHHHHHHHHHHh
Q psy16707        393 TK-DG------RISMAG-VTSKNVGYLAKAIHAVT  419 (420)
Q Consensus       393 ~p-~g------Ris~ag-l~~~ni~~la~AI~~vv  419 (420)
                      .| +.      |+.+-. .+.+-++.|.+.|.+++
T Consensus       409 ~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~~~v  443 (450)
T d1pmma_         409 LGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASL  443 (450)
T ss_dssp             CCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence            33 21      776532 24445788888887765

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=81.52  E-value=20  Score=32.98  Aligned_cols=80  Identities=20%  Similarity=0.231  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccCCCCceEEecCC---CHHHHHHHHHhCCeEEeCCC----cEEEc-ccCCCCHH
Q psy16707        338 ADRIISMRQSLKDNLQKEGSNKPWNHITDQIGMFCYTGL---NATQVEKLIKEHSVYLTKDG----RISMA-GVTSKNVG  409 (420)
Q Consensus       338 ~~r~~~~R~~l~~~L~~~g~~~~w~~i~~q~GmF~~~~l---~~~~v~~Ll~e~~Vy~~p~g----Ris~a-gl~~~ni~  409 (420)
                      .++++++-+.+.+.|+++..+  .-.-....|++..+-+   ....+..+..++++++.+.|    |++-+ .++++.|+
T Consensus       299 ~~~v~~~g~~l~~~L~~l~~~--~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~g~l~~~~g~~~ir~~Ppl~it~~~ld  376 (387)
T d1vefa1         299 WERAAELGPWFMEKLRAIPSP--KIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLE  376 (387)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCT--TEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHH
T ss_pred             cchHhhhhHHHHHHHHhcCCC--ceEEEeecceEEEEEEeCCchHHHHHHHHHCCCeEEecCCCEEEEECCccCCHHHHH
Confidence            356666666777888876532  1111234565553322   24556566677888876644    55421 36889999


Q ss_pred             HHHHHHHHHh
Q psy16707        410 YLAKAIHAVT  419 (420)
Q Consensus       410 ~la~AI~~vv  419 (420)
                      .+.++|++++
T Consensus       377 ~~~~~i~~aL  386 (387)
T d1vefa1         377 RVVEAVRAVL  386 (387)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999986