Psyllid ID: psy16849

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
Protein Sequence
MWQEFESFLLGPPAPCQVSPVSICNPTLGPTVMLSSSSQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIVPSSHSRTK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccHHHHHHHHcccccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccEEEEEEEcEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEcccccccccccEEEcccccccccccccccccccccccccccEEcEEEcccccccccccccccccccccEEEcEEEEcccccccccccccccccccccccccHEccccEEccccccccccccccccccccEEEEEEcccccccccccccccEccccHHHEHcccccccccccccccccEccccHHHEHEccccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccccccccccccHHHHHHccccccccccccHccccEccccHHHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
mwqefesfllgppapcqvspvsicnptlgptvmlssssqivkeeygfptakyveepqlnqneefvDLDMLINYAAEQHSFsnmkkleddnfyvcsnvmfdsqnqlypsennnnlnvdescvqisplAYNALMtfvpnneniindmsppasptnringsftKMIIADEVVCKEATenyqnkvitppmspmltdplllnrtevppvnnnnnnnntrvnintpsktktrerrsgsrkkltshacfhpgcgktytksshLKAHLrthtgekpyqckwkgcgwkfarsDELTRHFrkhtgdrpfqckpnlvnpsikegkdlaatakcpsadtsqpfktWATVVSTYNFTRSTCHLILQAEIgvslkivpsshsrtk
Flexible Loop (DISEMBL)
MWQEFESFLLGPPAPCQVSPVSICNPTLGPTVMLSSSSQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENyqnkvitppmsPMLTDPLLLNRTEVPpvnnnnnnnntrvnintpsktktrerrsgsrkkltshacfhpgcgktytksSHLKAHLrthtgekpyqckwkgcgWKFARSDELTRHFrkhtgdrpfqckpnlvnpSIKEGKDLAATAKcpsadtsqpfkTWATVVSTYNFTRSTCHLILQaeigvslkivpsshsrtk
Low Complexity Region (SEG)
MWQEFESFLLGPPAPCQVSPVSICNPTLGPTVMLSSSSQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLnrtevppvnnnnnnnntrvnintpSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIVPSSHSRTK
Disordered region (IsUnstruct)
*******FLLGPPAPCQVSPVSICNPTLGPTVMLSS*SQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYP***NNNLNVDESCVQISPLAYNALMTFVPNNENII************INGSFTKMIIADEVVCKEATENYQNKVI*********************************************************ACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH************************************PFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIV********
Disordered Region (DISOPRED)
*WQEFESFLLGPPAPCQ*******************************************************************************************************************************************************************************************************************************CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAAT******************VS**NFTRSTCHLILQAEIGVS************
Disordered Region (DISEMBL)
MWQEFESFLLGPPAPCQVSPVSICNPTLGPTVMLSSSSQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTP*****************SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIV********
Disordered Region (DISPRO)
***********************CNPTLGPTVMLSSSSQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIVPS******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWQEFESFLLGPPAPCQVSPVSICNPTLGPTVMLSSSSQIVKEEYGFPTAKYVEEPQLNQNEEFVDLDMLINYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIVPSSHSRTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	371	2.2.26 [Sep-21-2011]
Q13351	362	Krueppel-like factor 1 OS	yes	N/A	0.229	0.234	0.704	1e-33
Q60793	483	Krueppel-like factor 4 OS	yes	N/A	0.207	0.159	0.779	9e-33
O43474	513	Krueppel-like factor 4 OS	no	N/A	0.207	0.150	0.779	1e-32
Q9Y5W3	355	Krueppel-like factor 2 OS	no	N/A	0.204	0.214	0.789	8e-32
Q60843	354	Krueppel-like factor 2 OS	no	N/A	0.204	0.214	0.776	6e-31
Q9ET58	351	Krueppel-like factor 2 OS	no	N/A	0.204	0.216	0.776	9e-31
P46099	358	Krueppel-like factor 1 OS	no	N/A	0.204	0.212	0.710	7e-29
Q13887	457	Krueppel-like factor 5 OS	no	N/A	0.312	0.253	0.516	1e-28
Q60980	344	Krueppel-like factor 3 OS	no	N/A	0.366	0.395	0.458	1e-27
P57682	345	Krueppel-like factor 3 OS	no	N/A	0.326	0.350	0.5	1e-27

>sp|Q13351|KLF1_HUMAN Krueppel-like factor 1 OS=Homo sapiens GN=KLF1 PE=1 SV=1

 Score =  144 bits (363), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 72/88 (81%), Gaps = 3/88 (3%)

Query: 215 VNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWK 274
           +    PSK   R RRS +RK+  +H C HPGCGK+YTKSSHLKAHLRTHTGEKPY C W+
Sbjct: 258 IAETAPSK---RGRRSWARKRQAAHTCAHPGCGKSYTKSSHLKAHLRTHTGEKPYACTWE 314

Query: 275 GCGWKFARSDELTRHFRKHTGDRPFQCK 302
           GCGW+FARSDELTRH+RKHTG RPF+C+
Sbjct: 315 GCGWRFARSDELTRHYRKHTGQRPFRCQ 342

Transcription regulator of erythrocyte development that probably serves as a general switch factor during erythropoiesis. Is a dual regulator of fetal-to-adult globin switching. Binds to the CACCC box in the beta-globin gene promoter and acts as a preferential activator of this gene. Furthermore, it binds to the BCL11A promoter and activates expression of BCL11A, which in turn represses the HBG1 and HBG2 genes. This dual activity ensures that, in most adults, fetal hemoglobin levels are low. Able to activate CD44 and AQP1 promoters. When sumoylated, acts as a transcriptional repressor by promoting interaction with CDH2/MI2beta and also represses megakaryocytic differentiation.
Homo sapiens (taxid: 9606)

>sp|Q60793|KLF4_MOUSE Krueppel-like factor 4 OS=Mus musculus GN=Klf4 PE=1 SV=3

 Score =  141 bits (355), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query: 226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
           R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct: 387 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 446

Query: 286 LTRHFRKHTGDRPFQCK 302
           LTRH+RKHTG RPFQC+
Sbjct: 447 LTRHYRKHTGHRPFQCQ 463

Transcription factor; can act both as activator and as repressor. Binds the 5'-CACCC-3' core sequence. Binds to the promoter region of its own gene and can activate its own transcription. Regulates the expression of key transcription factors during embryonic development. Plays an important role in maintaining embryonic stem cells, and in preventing their differentiation. Required for establishing the barrier function of the skin and for postnatal maturation and maintenance of the ocular surface. Involved in the differentiation of epithelial cells and may also function in skeletal and kidney development. Contributes to the down-regulation of p53/TP53 transcription.

Mus musculus (taxid: 10090)

>sp|O43474|KLF4_HUMAN Krueppel-like factor 4 OS=Homo sapiens GN=KLF4 PE=1 SV=3

 Score =  140 bits (353), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query: 226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
           R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct: 417 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 476

Query: 286 LTRHFRKHTGDRPFQCK 302
           LTRH+RKHTG RPFQC+
Sbjct: 477 LTRHYRKHTGHRPFQCQ 493

Transcription factor; can act both as activator and as repressor. Binds the 5'-CACCC-3' core sequence. Binds to the promoter region of its own gene and can activate its own transcription. Regulates the expression of key transcription factors during embryonic development. Plays an important role in maintaining embryonic stem cells, and in preventing their differentiation. Required for establishing the barrier function of the skin and for postnatal maturation and maintenance of the ocular surface. Involved in the differentiation of epithelial cells and may also function in skeletal and kidney development. Contributes to the down-regulation of p53/TP53 transcription.

Homo sapiens (taxid: 9606)

>sp|Q9Y5W3|KLF2_HUMAN Krueppel-like factor 2 OS=Homo sapiens GN=KLF2 PE=1 SV=2

 Score =  138 bits (347), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 64/76 (84%)

Query: 226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
           R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct: 259 RGRRSWPRKRTATHTCSYAGCGKTYTKSSHLKAHLRTHTGEKPYHCNWDGCGWKFARSDE 318

Query: 286 LTRHFRKHTGDRPFQC 301
           LTRH+RKHTG RPFQC
Sbjct: 319 LTRHYRKHTGHRPFQC 334

Binds to the CACCC box in the beta-globin gene promoter and activates transcription.

Homo sapiens (taxid: 9606)

>sp|Q60843|KLF2_MOUSE Krueppel-like factor 2 OS=Mus musculus GN=Klf2 PE=1 SV=2

 Score =  135 bits (339), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 64/76 (84%)

Query: 226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
           R RRS  RK+  +H C +  CGKTYTKSSHLKAHLRTHTGEKPY C W+GCGWKFARSDE
Sbjct: 258 RGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTGEKPYHCNWEGCGWKFARSDE 317

Query: 286 LTRHFRKHTGDRPFQC 301
           LTRH+RKHTG RPFQC
Sbjct: 318 LTRHYRKHTGHRPFQC 333

Binds to the CACCC box in the beta-globin gene promoter and activates transcription.

Mus musculus (taxid: 10090)

>sp|Q9ET58|KLF2_RAT Krueppel-like factor 2 OS=Rattus norvegicus GN=Klf2 PE=3 SV=1

 Score =  134 bits (338), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 63/76 (82%)

Query: 226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
           R RRS  RK+  +H C +  CGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct: 255 RGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTGEKPYHCNWDGCGWKFARSDE 314

Query: 286 LTRHFRKHTGDRPFQC 301
           LTRH+RKHTG RPFQC
Sbjct: 315 LTRHYRKHTGHRPFQC 330

Binds to the CACCC box in the beta-globin gene promoter and activates transcription.

Rattus norvegicus (taxid: 10116)

>sp|P46099|KLF1_MOUSE Krueppel-like factor 1 OS=Mus musculus GN=Klf1 PE=1 SV=2

 Score =  128 bits (321), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 62/76 (81%)

Query: 226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
           R RR+ + K+  +H C H GCGK+Y+KSSHLKAHLRTHTGEKPY C W GC W+FARSDE
Sbjct: 262 RSRRTLAPKRQAAHTCGHEGCGKSYSKSSHLKAHLRTHTGEKPYACSWDGCDWRFARSDE 321

Query: 286 LTRHFRKHTGDRPFQC 301
           LTRH+RKHTG RPF C
Sbjct: 322 LTRHYRKHTGHRPFCC 337

Transcription regulator of erythrocyte development. Binds to the CACCC box in the beta-globin gene promoter and activates transcription. Probably serves as a general switch factor for erythroid development. When sumoylated, acts as a transcriptional repressor by promoting interaction with CDH2/MI2beta and also represses megakaryocytic differentiation.

Mus musculus (taxid: 10090)

>sp|Q13887|KLF5_HUMAN Krueppel-like factor 5 OS=Homo sapiens GN=KLF5 PE=1 SV=2

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 73/118 (61%), Gaps = 2/118 (1%)

Query: 204 VNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTH 263
           ++N N      VN       +   R +   +K   H C +PGC K YTKSSHLKAHLRTH
Sbjct: 338 IHNPNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTH 397

Query: 264 TGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAK 321
           TGEKPY+C W+GC W+FARSDELTRH+RKHTG +PFQC   + N S      LA   K
Sbjct: 398 TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSRSDHLALHMK 453

Transcription factor that binds to GC box promoter elements. Activates the transcription of these genes.

Homo sapiens (taxid: 9606)

>sp|Q60980|KLF3_MOUSE Krueppel-like factor 3 OS=Mus musculus GN=Klf3 PE=1 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 82/144 (56%), Gaps = 8/144 (5%)

Query: 158 SFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNI 217
           S+ K ++  ++  +   E  +       MSP L +P       V P       N+  V I
Sbjct: 186 SYEKPLLQKKIKIEPGIEPQRTDYYPEEMSPPLMNP-------VSPPQALLQENHPSV-I 237

Query: 218 NTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCG 277
             P K         +++K   H C + GC K YTKSSHLKAH RTHTGEKPY+C W+GC 
Sbjct: 238 VQPGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCT 297

Query: 278 WKFARSDELTRHFRKHTGDRPFQC 301
           WKFARSDELTRHFRKHTG +PFQC
Sbjct: 298 WKFARSDELTRHFRKHTGIKPFQC 321

Binds to the CACCC box of erythroid cell-expressed genes. May play a role in hematopoiesis.

Mus musculus (taxid: 10090)

>sp|P57682|KLF3_HUMAN Krueppel-like factor 3 OS=Homo sapiens GN=KLF3 PE=1 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 78/132 (59%), Gaps = 11/132 (8%)

Query: 178 QNKV-ITPPMSPMLTD-------PLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERR 229
           Q K+ I P + P  TD       P L+N    P      N+ +    I  P K       
Sbjct: 194 QKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSV---IVQPGKRPLPVES 250

Query: 230 SGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH 289
             +++K   H C + GC K YTKSSHLKAH RTHTGEKPY+C W+GC WKFARSDELTRH
Sbjct: 251 PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARSDELTRH 310

Query: 290 FRKHTGDRPFQC 301
           FRKHTG +PFQC
Sbjct: 311 FRKHTGIKPFQC 322

Binds to the CACCC box of erythroid cell-expressed genes. May play a role in hematopoiesis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
242009533	404	conserved hypothetical protein [Pediculu	0.415	0.381	0.525	7e-38
405974536	416	Krueppel-like factor 1 [Crassostrea giga	0.288	0.257	0.634	1e-37
241997400	324	zinc finger, putative [Ixodes scapularis	0.326	0.373	0.578	2e-35
269784847	356	KLF2-like transcription factor [Saccoglo	0.404	0.421	0.525	2e-35
390346400	402	PREDICTED: uncharacterized protein LOC57	0.253	0.233	0.708	2e-34
391331029	405	PREDICTED: uncharacterized protein LOC10	0.776	0.711	0.329	3e-33
161511587	389	KLF2/4 [Paracentrotus lividus]	0.245	0.233	0.670	6e-33
147906739	413	Kruppel-like factor 17 [Xenopus laevis]	0.280	0.251	0.556	8e-33
328696831	414	PREDICTED: Krueppel-like factor 6-like [	0.309	0.277	0.581	1e-32
62825100	510	kruppel-like factor 4 [Sus scrofa] gi|19	0.493	0.358	0.421	2e-32

>gi|242009533|ref|XP_002425538.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509413|gb|EEB12800.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  164 bits (414), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/175 (52%), Positives = 109/175 (62%), Gaps = 21/175 (12%)

Query: 132 MTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQN----KVITPPMS 187
           MT V    N    +SPPASP   I G+    +       ++     +N    K++TPP S
Sbjct: 225 MTPVSGYVNGSGTLSPPASP--EIQGTTPHDLFTAPHFNQQKILPSENLPSLKIMTPPSS 282

Query: 188 PMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHACFHPGCG 247
           P LT+ L    + +P VNN    + T+           R RRS  RKKLT+H C +PGC 
Sbjct: 283 PNLTEYL----SSLPVVNNQVIEHKTK-----------RGRRSCGRKKLTTHTCSNPGCR 327

Query: 248 KTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           KTYTKSSHLKAHLRTHTGEKPYQC WKGC WKFARSDELTRH+RKHTGDRPFQC+
Sbjct: 328 KTYTKSSHLKAHLRTHTGEKPYQCGWKGCSWKFARSDELTRHYRKHTGDRPFQCR 382

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405974536|gb|EKC39171.1| Krueppel-like factor 1 [Crassostrea gigas]

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 16/123 (13%)

Query: 179 NKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTS 238
           +++ITPP SP L D LL      PP  ++           T ++ K R RR+  RK+ TS
Sbjct: 289 HQMITPPSSPQLVDLLL-----PPPTVDS-----------TAAQPKKRGRRTWGRKRQTS 332

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           H C HPGC KTYTKSSHLKAHLRTHTGEKPY C WKGCGWKFARSDELTRH+RKHTGDRP
Sbjct: 333 HTCTHPGCNKTYTKSSHLKAHLRTHTGEKPYACTWKGCGWKFARSDELTRHYRKHTGDRP 392

Query: 299 FQC 301
           FQC
Sbjct: 393 FQC 395

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|241997400|ref|XP_002433349.1| zinc finger, putative [Ixodes scapularis] gi|215490772|gb|EEC00413.1| zinc finger, putative [Ixodes scapularis]

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 94/133 (70%), Gaps = 12/133 (9%)

Query: 180 KVITPPMSPMLTDPLL---------LNRTEVPP-VNNNNNNNNTRVNINTPSKTKTRERR 229
           +++TPP SP L D L           + T +PP V+  +    +   + +P+K    ++R
Sbjct: 172 RMVTPPSSPRLADLLSAGSAMAHGPFSPTAIPPEVHLPDQYCRSSPILGSPAKKS--QQR 229

Query: 230 SGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH 289
           S SRKK+T H C HPGC K+YTKSSHLKAHLRTHTGEKPYQC WK CGWKFARSDELTRH
Sbjct: 230 SLSRKKVTIHTCSHPGCSKSYTKSSHLKAHLRTHTGEKPYQCNWKECGWKFARSDELTRH 289

Query: 290 FRKHTGDRPFQCK 302
           +RKHTGDRPFQC+
Sbjct: 290 YRKHTGDRPFQCR 302

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|269784847|ref|NP_001161575.1| KLF2-like transcription factor [Saccoglossus kowalevskii] gi|268054143|gb|ACY92558.1| KLF2-like transcription factor [Saccoglossus kowalevskii]

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 101/160 (63%), Gaps = 10/160 (6%)

Query: 145 MSPPASPTNR--INGSFTKMIIADEVVCKEATENYQNKV-ITPPMSPMLTDPLLLNRTEV 201
           MSPPASP +   +     +     E      +   Q +  +TPP SP+L   LL+N ++ 
Sbjct: 183 MSPPASPNSGMILEPPQKRAYFKQEPTSPSVSIAMQMQTSLTPPSSPLLD--LLMN-SQA 239

Query: 202 PPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLR 261
           P     +    T+    +   +K + RRS  RK+  SH C HPGC KTYTKSSHLKAHLR
Sbjct: 240 PSSLTVDGLGATQ----SQQTSKRKGRRSWGRKRTASHTCTHPGCIKTYTKSSHLKAHLR 295

Query: 262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           THTGEKPY C WKGCGWKFARSDELTRH+RKHTGDRPFQC
Sbjct: 296 THTGEKPYHCNWKGCGWKFARSDELTRHYRKHTGDRPFQC 335

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|390346400|ref|XP_781601.2| PREDICTED: uncharacterized protein LOC576170 [Strongylocentrotus purpuratus]

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 75/96 (78%), Gaps = 2/96 (2%)

Query: 208 NNNNNTRVNINTPSKTKTRE--RRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTG 265
           N   +T V  + P+    R   RR+  RK+ TSH C HPGCGKTYTKSSHLKAH+RTHTG
Sbjct: 274 NTPVDTAVPTSVPATQIVRRKGRRTWGRKRTTSHTCSHPGCGKTYTKSSHLKAHMRTHTG 333

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           EKPY C WKGCGWKFARSDELTRH+RKHTGDRPFQC
Sbjct: 334 EKPYHCNWKGCGWKFARSDELTRHYRKHTGDRPFQC 369

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|391331029|ref|XP_003739953.1| PREDICTED: uncharacterized protein LOC100901904 [Metaseiulus occidentalis]

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 162/367 (44%), Gaps = 79/367 (21%)

Query: 1   MWQEFESFLLGPPAP-CQVSPVSI-----------------------CNPTLGPTVMLSS 36
           MWQ+ ESFLL    P  +VS  +I                       C+ + G     SS
Sbjct: 31  MWQDIESFLLDDVHPDVRVSLAAINNHSSHHGHHMISHQQQQHRVFRCSDSTGQLSPASS 90

Query: 37  SSQIVKEEYGFPTAKYVEEPQLNQN--EEFVDLDMLINYAAEQ----------------- 77
           +S     E    +A Y  EP L +   EE        +YAA Q                 
Sbjct: 91  TSSYAPHE---SSALYAAEPNLYEKAKEEQALYHPQASYAAPQVVPQVVGQTYISSPPNG 147

Query: 78  -HSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNALMTFVP 136
            +S +   ++ED   Y  + ++     Q  PS   ++ +   S  QISP A        P
Sbjct: 148 YYSAATSGQVEDFKLYSSTGMIGGYSQQTAPSWFPSSASTTTS-TQISPPASPETQVGCP 206

Query: 137 NNENIINDM------SPPASP---------------TNRINGSFTKMIIADEVVCKEATE 175
            +  + N +      +PP+SP                      F   +++  VV K+ T 
Sbjct: 207 YSAALENGLQYPRMVTPPSSPHLSADLLVSTSTSSVMTSSTPQFCPSMLSQSVVLKQRTA 266

Query: 176 NYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKK 235
           + +  +    +S  L +  L         ++  +N N+ V +            S S KK
Sbjct: 267 SSRRPMRRTSVSEPLPNGAL---------SSAASNGNSGVVVGPQVGGGVGNGGSKS-KK 316

Query: 236 LTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           +T H C HPGC KTYTKSSHLKAHLRTHTGEKPY C WKGCGWKFARSDELTRH+RKHTG
Sbjct: 317 ITIHTCSHPGCAKTYTKSSHLKAHLRTHTGEKPYMCTWKGCGWKFARSDELTRHYRKHTG 376

Query: 296 DRPFQCK 302
           DRPFQC+
Sbjct: 377 DRPFQCR 383

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161511587|gb|ABX71820.1| KLF2/4 [Paracentrotus lividus]

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 6/97 (6%)

Query: 211 NNTRVNINTPSKT------KTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHT 264
            NT V+   P+        + + RR+  RK+ T+H C  PGCGKTYTKSSHLKAH+RTHT
Sbjct: 272 RNTPVDSTVPTSVPATQIVRRKGRRTWGRKRTTTHTCSRPGCGKTYTKSSHLKAHMRTHT 331

Query: 265 GEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           GEKPY C WKGCGWKFARSDELTRH+RKHTGDRPFQC
Sbjct: 332 GEKPYHCNWKGCGWKFARSDELTRHYRKHTGDRPFQC 368

Source: Paracentrotus lividus

Species: Paracentrotus lividus

Genus: Paracentrotus

Family: Echinidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|147906739|ref|NP_001082133.1| Kruppel-like factor 17 [Xenopus laevis] gi|15919361|gb|AAL10792.1|AF353715_1 Kruppel-like transcription factor neptune [Xenopus laevis] gi|133777091|gb|AAH71074.2| LOC398243 protein [Xenopus laevis]

 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 20/124 (16%)

Query: 178 QNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLT 237
              ++TPP SP+L         E  P  +  ++   +           R RRS +RK+  
Sbjct: 289 HGMIVTPPSSPLL---------EYYPAMSATDDCKPK-----------RGRRSWARKRTA 328

Query: 238 SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           +H+C +PGCGKTYTKSSHLKAH+RTHTGEKPY C W+GCGWKFARSDELTRHFRKHTG R
Sbjct: 329 THSCEYPGCGKTYTKSSHLKAHMRTHTGEKPYHCNWEGCGWKFARSDELTRHFRKHTGHR 388

Query: 298 PFQC 301
           PFQC
Sbjct: 389 PFQC 392

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328696831|ref|XP_003240145.1| PREDICTED: Krueppel-like factor 6-like [Acyrthosiphon pisum]

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 83/122 (68%), Gaps = 7/122 (5%)

Query: 181 VITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRKKLTSHA 240
           ++TPP SP   D  +     V  V       + R +  T      R +R+  +K   +H+
Sbjct: 279 MMTPPSSPPEDDVKM-----VATVATKATTGSQRSSRRTGGVGDRRPQRA--KKTSANHS 331

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C HPGCGKTYTKSSHLKAHLRTHTGEKPYQC W GCGWKFARSDELTRHFRKHTGDRPF+
Sbjct: 332 CGHPGCGKTYTKSSHLKAHLRTHTGEKPYQCYWNGCGWKFARSDELTRHFRKHTGDRPFK 391

Query: 301 CK 302
           C+
Sbjct: 392 CR 393

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62825100|gb|AAY16111.1| kruppel-like factor 4 [Sus scrofa] gi|194719420|gb|ACF93740.1| Kruppel-like factor 4 isoform b [Sus scrofa]

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 100/209 (47%), Gaps = 26/209 (12%)

Query: 99  FDSQNQLYPSENNNNLNVDE-----SCVQISPLAYNALMTFVPNNENIINDMSPPASPTN 153
           F    QL PS     L  +E      C    PL         PN    + D   P  P  
Sbjct: 303 FPLGRQL-PSRTTPTLGAEELLSSRDCHPALPLPPGFHPHHGPNYPPFLPDQLQPQVPPL 361

Query: 154 RINGSFTKMIIADEVVCKEATENYQNKVITPPMSPMLTDPLLLNRTEVPPVNNNNNNNNT 213
              G    +++     C          V+TPP SP+   P      E P           
Sbjct: 362 HYQGQSRGIVVGAGEPCICRPSGAHGMVLTPPSSPLELMPPGSCMPEEP----------- 410

Query: 214 RVNINTPSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKW 273
                   K K R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W
Sbjct: 411 --------KPK-RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW 461

Query: 274 KGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            GCGWKFARSDELTRH+RKHTG RPFQC+
Sbjct: 462 DGCGWKFARSDELTRHYRKHTGHRPFQCQ 490

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
UNIPROTKB|Q52JJ4	510	KLF4 "Uncharacterized protein"	0.207	0.150	0.779	4.4e-36
UNIPROTKB|K7GNW9	519	KLF2 "Uncharacterized protein"	0.207	0.148	0.779	6.1e-36
UNIPROTKB|Q0P5B6	372	KLF1 "Kruppel-like factor 1 (E	0.207	0.206	0.766	2.4e-35
UNIPROTKB|E1C3K5	409	KLF1 "Uncharacterized protein"	0.204	0.185	0.789	2.4e-35
UNIPROTKB|O43474	513	KLF4 "Krueppel-like factor 4"	0.207	0.150	0.779	3.9e-35
MGI|MGI:1342287	483	Klf4 "Kruppel-like factor 4 (g	0.207	0.159	0.779	1e-34
RGD|621445	482	Klf4 "Kruppel-like factor 4 (g	0.207	0.159	0.779	1e-34
ZFIN|ZDB-GENE-011109-1	380	klf2a "Kruppel-like factor 2a"	0.215	0.210	0.753	2.7e-34
ZFIN|ZDB-GENE-010129-1	409	klf4b "Kruppel-like factor 4b"	0.215	0.195	0.777	1.2e-33
UNIPROTKB|F1PSS3	369	KLF1 "Uncharacterized protein"	0.207	0.208	0.766	4.1e-33

UNIPROTKB|Q52JJ4 KLF4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 354 (129.7 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct:   414 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 473

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPFQC+
Sbjct:   474 LTRHYRKHTGHRPFQCQ 490

GO:2000342 "negative regulation of chemokine (C-X-C motif) ligand 2 production" evidence=IEA

GO:0090051 "negative regulation of cell migration involved in sprouting angiogenesis" evidence=IEA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0060761 "negative regulation of response to cytokine stimulus" evidence=IEA

GO:0048730 "epidermis morphogenesis" evidence=IEA

GO:0046985 "positive regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0045444 "fat cell differentiation" evidence=IEA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0035166 "post-embryonic hemopoiesis" evidence=IEA

GO:0034115 "negative regulation of heterotypic cell-cell adhesion" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA

GO:0019827 "stem cell maintenance" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0001190 "RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0001010 "sequence-specific DNA binding transcription factor recruiting transcription factor activity" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|K7GNW9 KLF2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 354 (129.7 bits), Expect = 6.1e-36, Sum P(2) = 6.1e-36
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct:   423 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 482

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPFQC+
Sbjct:   483 LTRHYRKHTGHRPFQCQ 499

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q0P5B6 KLF1 "Kruppel-like factor 1 (Erythroid)" [Bos taurus (taxid:9913)]

 Score = 361 (132.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 59/77 (76%), Positives = 67/77 (87%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS +RK+  +H C HPGCGK+YTKSSHLKAHLRTHTGEKPY C W GCGW+FARSDE
Sbjct:   276 RSRRSWARKRQAAHTCTHPGCGKSYTKSSHLKAHLRTHTGEKPYACTWDGCGWRFARSDE 335

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPF+C+
Sbjct:   336 LTRHYRKHTGQRPFRCQ 352

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0035162 "embryonic hemopoiesis" evidence=IEA

GO:0006338 "chromatin remodeling" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1C3K5 KLF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 361 (132.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 60/76 (78%), Positives = 67/76 (88%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS +RK+  +H C +PGCGKTYTKSSHLKAH+RTHTGEKPY C W+GCGWKFARSDE
Sbjct:   313 RGRRSWARKRTATHNCEYPGCGKTYTKSSHLKAHMRTHTGEKPYHCTWEGCGWKFARSDE 372

Query:   286 LTRHFRKHTGDRPFQC 301
             LTRH+RKHTG RPFQC
Sbjct:   373 LTRHYRKHTGHRPFQC 388

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0006338 "chromatin remodeling" evidence=IEA

GO:0035162 "embryonic hemopoiesis" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|O43474 KLF4 "Krueppel-like factor 4" [Homo sapiens (taxid:9606)]

 Score = 354 (129.7 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct:   417 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 476

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPFQC+
Sbjct:   477 LTRHYRKHTGHRPFQCQ 493

GO:0003690 "double-stranded DNA binding" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0014067 "negative regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA

GO:0014740 "negative regulation of muscle hyperplasia" evidence=IEA

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IEA

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IEA

GO:0048730 "epidermis morphogenesis" evidence=IEA

GO:0051898 "negative regulation of protein kinase B signaling cascade" evidence=IEA

GO:0070373 "negative regulation of ERK1 and ERK2 cascade" evidence=IEA

GO:0008270 "zinc ion binding" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS;NAS

GO:0044212 "transcription regulatory region DNA binding" evidence=ISS

GO:0045595 "regulation of cell differentiation" evidence=ISS

GO:0019827 "stem cell maintenance" evidence=ISS

GO:0007500 "mesodermal cell fate determination" evidence=TAS

GO:0008285 "negative regulation of cell proliferation" evidence=TAS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;ISS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS

GO:0045444 "fat cell differentiation" evidence=ISS

GO:0001010 "sequence-specific DNA binding transcription factor recruiting transcription factor activity" evidence=ISS

GO:0001085 "RNA polymerase II transcription factor binding" evidence=ISS;IPI

GO:0001190 "RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription" evidence=IDA

GO:0046985 "positive regulation of hemoglobin biosynthetic process" evidence=IMP

GO:0035166 "post-embryonic hemopoiesis" evidence=IMP

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IMP

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IDA

GO:0000790 "nuclear chromatin" evidence=IDA

GO:0050728 "negative regulation of inflammatory response" evidence=TAS

GO:0051247 "positive regulation of protein metabolic process" evidence=IGI

GO:0034115 "negative regulation of heterotypic cell-cell adhesion" evidence=IDA

GO:0060761 "negative regulation of response to cytokine stimulus" evidence=IDA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IDA

GO:0071363 "cellular response to growth factor stimulus" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IDA

GO:2000342 "negative regulation of chemokine (C-X-C motif) ligand 2 production" evidence=IDA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=IDA

GO:0090051 "negative regulation of cell migration involved in sprouting angiogenesis" evidence=IDA

MGI|MGI:1342287 Klf4 "Kruppel-like factor 4 (gut)" [Mus musculus (taxid:10090)]

 Score = 354 (129.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct:   387 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 446

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPFQC+
Sbjct:   447 LTRHYRKHTGHRPFQCQ 463

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000785 "chromatin" evidence=ISO

GO:0000790 "nuclear chromatin" evidence=ISO

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=ISO

GO:0001010 "sequence-specific DNA binding transcription factor recruiting transcription factor activity" evidence=IDA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISO

GO:0001085 "RNA polymerase II transcription factor binding" evidence=ISO;IPI

GO:0001190 "RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS

GO:0003690 "double-stranded DNA binding" evidence=ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA;NAS

GO:0005667 "transcription factor complex" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA

GO:0008134 "transcription factor binding" evidence=IPI

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IDA

GO:0009913 "epidermal cell differentiation" evidence=IMP

GO:0014067 "negative regulation of phosphatidylinositol 3-kinase cascade" evidence=ISO

GO:0014740 "negative regulation of muscle hyperplasia" evidence=ISO

GO:0019827 "stem cell maintenance" evidence=IDA

GO:0030154 "cell differentiation" evidence=IMP

GO:0031077 "post-embryonic camera-type eye development" evidence=IMP

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=ISO

GO:0032526 "response to retinoic acid" evidence=IDA

GO:0034115 "negative regulation of heterotypic cell-cell adhesion" evidence=ISO

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=ISO

GO:0035166 "post-embryonic hemopoiesis" evidence=ISO

GO:0042127 "regulation of cell proliferation" evidence=IGI

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0043551 "regulation of phosphatidylinositol 3-kinase activity" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO;IDA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=ISO

GO:0045444 "fat cell differentiation" evidence=IMP

GO:0045595 "regulation of cell differentiation" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;ISS;NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IMP;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046985 "positive regulation of hemoglobin biosynthetic process" evidence=ISO

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=ISO

GO:0048730 "epidermis morphogenesis" evidence=IMP

GO:0051247 "positive regulation of protein metabolic process" evidence=ISO

GO:0051898 "negative regulation of protein kinase B signaling cascade" evidence=ISO

GO:0060761 "negative regulation of response to cytokine stimulus" evidence=ISO

GO:0070373 "negative regulation of ERK1 and ERK2 cascade" evidence=ISO

GO:0071363 "cellular response to growth factor stimulus" evidence=ISO

GO:0090051 "negative regulation of cell migration involved in sprouting angiogenesis" evidence=ISO

GO:2000342 "negative regulation of chemokine (C-X-C motif) ligand 2 production" evidence=ISO

RGD|621445 Klf4 "Kruppel-like factor 4 (gut)" [Rattus norvegicus (taxid:10116)]

 Score = 354 (129.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
 Identities = 60/77 (77%), Positives = 65/77 (84%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS  RK+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDE
Sbjct:   386 RGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDE 445

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPFQC+
Sbjct:   446 LTRHYRKHTGHRPFQCQ 462

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000785 "chromatin" evidence=IDA

GO:0000790 "nuclear chromatin" evidence=IEA;ISO

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA;ISO

GO:0001010 "sequence-specific DNA binding transcription factor recruiting transcription factor activity" evidence=IEA;ISO

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISO;IDA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA;ISO

GO:0001190 "RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription" evidence=IEA;ISO

GO:0003690 "double-stranded DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005667 "transcription factor complex" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO

GO:0008134 "transcription factor binding" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0009913 "epidermal cell differentiation" evidence=IEA;ISO

GO:0014067 "negative regulation of phosphatidylinositol 3-kinase cascade" evidence=IMP

GO:0014740 "negative regulation of muscle hyperplasia" evidence=IMP

GO:0019827 "stem cell maintenance" evidence=IEA;ISO

GO:0030154 "cell differentiation" evidence=ISO

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA;ISO

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA;ISO

GO:0032526 "response to retinoic acid" evidence=IEA;ISO

GO:0034115 "negative regulation of heterotypic cell-cell adhesion" evidence=IEA;ISO

GO:0035014 "phosphatidylinositol 3-kinase regulator activity" evidence=IMP

GO:0035166 "post-embryonic hemopoiesis" evidence=IEA;ISO

GO:0042127 "regulation of cell proliferation" evidence=ISO

GO:0042221 "response to chemical stimulus" evidence=ISO

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA;ISO

GO:0043551 "regulation of phosphatidylinositol 3-kinase activity" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO;IDA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=IEA;ISO

GO:0045444 "fat cell differentiation" evidence=IEA;ISO

GO:0045595 "regulation of cell differentiation" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;ISS;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IDA

GO:0046985 "positive regulation of hemoglobin biosynthetic process" evidence=IEA;ISO

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IDA;IMP

GO:0048730 "epidermis morphogenesis" evidence=IEA;ISO

GO:0051247 "positive regulation of protein metabolic process" evidence=ISO

GO:0051898 "negative regulation of protein kinase B signaling cascade" evidence=IMP

GO:0060761 "negative regulation of response to cytokine stimulus" evidence=IEA;ISO

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEP

GO:0070373 "negative regulation of ERK1 and ERK2 cascade" evidence=IMP

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA;ISO

GO:0071407 "cellular response to organic cyclic compound" evidence=IEP

GO:0090051 "negative regulation of cell migration involved in sprouting angiogenesis" evidence=IEA;ISO

GO:1901653 "cellular response to peptide" evidence=IEP

GO:2000342 "negative regulation of chemokine (C-X-C motif) ligand 2 production" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

ZFIN|ZDB-GENE-011109-1 klf2a "Kruppel-like factor 2a" [Danio rerio (taxid:7955)]

 Score = 348 (127.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 61/81 (75%), Positives = 66/81 (81%)

Query:   221 SKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKF 280
             +K K R RR+  RK+  +H C   GCGKTYTKSSHLKAH RTHTGEKPY C W+GCGWKF
Sbjct:   280 AKPK-RGRRTWPRKRTATHTCTFSGCGKTYTKSSHLKAHHRTHTGEKPYHCSWEGCGWKF 338

Query:   281 ARSDELTRHFRKHTGDRPFQC 301
             ARSDELTRHFRKHTG RPFQC
Sbjct:   339 ARSDELTRHFRKHTGHRPFQC 359

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0061444 "endocardial cushion cell development" evidence=IMP

GO:0003171 "atrioventricular valve development" evidence=IMP

ZFIN|ZDB-GENE-010129-1 klf4b "Kruppel-like factor 4b" [Danio rerio (taxid:7955)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 63/81 (77%), Positives = 70/81 (86%)

Query:   221 SKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKF 280
             SK K R RRS +RK+  +H+C  PGCGKTYTKSSHLKAH+RTHTGEKPY C W+GCGWKF
Sbjct:   309 SKPK-RGRRSWARKRTATHSCEFPGCGKTYTKSSHLKAHMRTHTGEKPYHCSWEGCGWKF 367

Query:   281 ARSDELTRHFRKHTGDRPFQC 301
             ARSDELTRH+RKHTG RPFQC
Sbjct:   368 ARSDELTRHYRKHTGHRPFQC 388

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IGI;IMP

GO:0030099 "myeloid cell differentiation" evidence=IGI

GO:0005634 "nucleus" evidence=IC

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0030218 "erythrocyte differentiation" evidence=IMP

GO:0048785 "hatching gland development" evidence=IMP

GO:0035188 "hatching" evidence=IMP

GO:0030097 "hemopoiesis" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

UNIPROTKB|F1PSS3 KLF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 59/77 (76%), Positives = 67/77 (87%)

Query:   226 RERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE 285
             R RRS +RK+  +H C HPGCGK+YTKSSHLKAHLRTHTGEKPY C W GCGW+FARSDE
Sbjct:   273 RSRRSWARKRQAAHTCTHPGCGKSYTKSSHLKAHLRTHTGEKPYACTWDGCGWRFARSDE 332

Query:   286 LTRHFRKHTGDRPFQCK 302
             LTRH+RKHTG RPF+C+
Sbjct:   333 LTRHYRKHTGQRPFRCQ 349

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	371
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	4e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 42.0 bits (98), Expect = 4e-04
 Identities = 42/250 (16%), Positives = 85/250 (34%), Gaps = 5/250 (2%)

Query: 71  INYAAEQHSFSNMKKLEDDNFYVCSNVMFDSQNQLYPSENNNNLNVDESCVQISPLAYNA 130
            N     HS     +       +  + + ++      S + N    +     +   + + 
Sbjct: 119 DNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSK 178

Query: 131 LMTFVPNNENIINDMSPPASPTNRINGSFTKMIIADEVVCKEATENYQNKVITPPMSPML 190
             +   +     N  +   S +     S +  I +          +    + T       
Sbjct: 179 DPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPK 238

Query: 191 TDPLLLNRTEVPPVNNNNNNNNTRVNINTPSKTKTRERRSGSRK-KLTSHACFHPGCGKT 249
           +       +     ++++ + + R ++ T S   +    S S   K  S       C  +
Sbjct: 239 SLLSQSPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGFSLPIKSKQCNIS 298

Query: 250 YTKSSHLKAHLRT--HTGE--KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNL 305
           +++SS L  HLR+  H+GE  KP+ C +  CG  F+R+D L RH   HT   P + K   
Sbjct: 299 FSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLN 358

Query: 306 VNPSIKEGKD 315
            +       +
Sbjct: 359 SSSKFSPLLN 368

Length = 467

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 12/18 (66%), Positives = 16/18 (88%)

Query: 255 HLKAHLRTHTGEKPYQCK 272
           +L+ H+RTHTGEKPY+C 
Sbjct: 1   NLRRHMRTHTGEKPYKCP 18

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	371
KOG2462|consensus	279		99.82
KOG2462|consensus	279		99.78
KOG3576|consensus	267		99.41
KOG3576|consensus	267		99.4
KOG1074|consensus	958		99.39
KOG3623|consensus	1007		99.32
KOG3608|consensus	467		99.29
KOG3608|consensus	467		99.05
KOG3623|consensus	1007		99.01
KOG1074|consensus	958		98.78
PHA00733	128	hypothetical protein	98.57
PHA02768	55	hypothetical protein; Provisional	98.44
PLN03086	567	PRLI-interacting factor K; Provisional	98.34
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.32
PLN03086	567	PRLI-interacting factor K; Provisional	98.19
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.0
PHA02768	55	hypothetical protein; Provisional	97.87
PHA00733	128	hypothetical protein	97.82
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.68
PHA00616	44	hypothetical protein	97.67
PHA00732	79	hypothetical protein	97.61
KOG3993|consensus	500		97.35
KOG3993|consensus	500		97.08
PHA00616	44	hypothetical protein	96.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.71
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.43
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.39
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.26
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.03
PHA00732	79	hypothetical protein	95.97
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.34
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.11
smart00355	26	ZnF_C2H2 zinc finger.	94.78
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.66
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.62
PRK04860	160	hypothetical protein; Provisional	94.45
COG5048	467	FOG: Zn-finger [General function prediction only]	93.72
smart00355	26	ZnF_C2H2 zinc finger.	93.56
KOG2231|consensus	669		93.42
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	93.41
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.32
COG5048	467	FOG: Zn-finger [General function prediction only]	92.83
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.28
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.33
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	91.25
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	90.78
KOG2231|consensus	669		90.61
KOG4173|consensus	253		89.61
PRK04860	160	hypothetical protein; Provisional	87.84
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	87.57
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	85.48
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	83.07
KOG1146|consensus	1406		80.85
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	80.25

>KOG2462|consensus

Probab=99.82  E-value=4.8e-20  Score=173.79  Aligned_cols=122  Identities=26%  Similarity=0.443  Sum_probs=108.0

Q ss_pred             cCCCCCCCcCCCCCCCchhhcccccc-----------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhH
Q psy16849        217 INTPSKTKTRERRSGSRKKLTSHACF-----------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE  285 (371)
Q Consensus       217 ~~~p~~c~~c~~~~~~~~~l~~H~c~-----------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~  285 (371)
                      ....++|..|++...+...|.+|+..           |+.|||.|..-..|+.|+|+|+  -+++|.+  |||.|.+.+-
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWL  202 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWL  202 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCccccc--ccccccchHH
Confidence            45568999999999999988888643           4559999999999999999998  7899977  9999999999


Q ss_pred             HHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCcccccccccccc
Q psy16849        286 LTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFT  344 (371)
Q Consensus       286 L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~~~l~~h~~~~  344 (371)
                      |+.|+|+|+|||||.|..  |+|+|..+++|+.||++|.+.+.+.|.+|++-|.=..++
T Consensus       203 LQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyL  259 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYL  259 (279)
T ss_pred             hhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHH
Confidence            999999999999999999  999999999999999999998888888887776544333

>KOG2462|consensus

Probab=99.78  E-value=7.7e-20  Score=172.44  Aligned_cols=101  Identities=30%  Similarity=0.481  Sum_probs=94.6

Q ss_pred             cCCCCCCCcCCCCCCCchhhcccccccC------CCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh
Q psy16849        217 INTPSKTKTRERRSGSRKKLTSHACFHP------GCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF  290 (371)
Q Consensus       217 ~~~p~~c~~c~~~~~~~~~l~~H~c~h~------~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~  290 (371)
                      ..+.+.|+.|++.+.+-..|+.|+.+|.      .|||.|.+.+-|+.|+|+|+|||||.|.+  |+|+|..+++|+.||
T Consensus       158 s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHm  235 (279)
T KOG2462|consen  158 SKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHM  235 (279)
T ss_pred             ccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHHHHH
Confidence            3667999999999999999998876654      49999999999999999999999999966  999999999999999


Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      ++|.+.|+|+|..  |+|+|.+++.|.+|..
T Consensus       236 QTHS~~K~~qC~~--C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  236 QTHSDVKKHQCPR--CGKSFALKSYLNKHSE  264 (279)
T ss_pred             HhhcCCccccCcc--hhhHHHHHHHHHHhhh
Confidence            9999999999999  9999999999999986

>KOG3576|consensus

Probab=99.41  E-value=9.7e-14  Score=126.10  Aligned_cols=101  Identities=26%  Similarity=0.468  Sum_probs=58.0

Q ss_pred             CCCCCcCCCCCCCchhhccccccc--------CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhh
Q psy16849        220 PSKTKTRERRSGSRKKLTSHACFH--------PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       220 p~~c~~c~~~~~~~~~l~~H~c~h--------~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      .+.|..|+++|...+-|.+|+.-|        ..|||.|.....|++|+|+|+|.+||+|..  |+|+|.++-.|..|.+
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHHHHH
Confidence            456666666666655555554222        116666666666666666666666666644  6666666666666654


Q ss_pred             h-hc----------CCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        292 K-HT----------GDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       292 ~-Ht----------geKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      . |.          .+|-|.|+.  ||.+-.+...+..|++.|+
T Consensus       195 kvhgv~~~yaykerr~kl~vced--cg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCED--CGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecc--cCCCCCChhHHHHHHHhcC
Confidence            2 22          134566666  6655666666666666655

>KOG3576|consensus

Probab=99.40  E-value=3e-13  Score=122.90  Aligned_cols=103  Identities=24%  Similarity=0.400  Sum_probs=86.8

Q ss_pred             ccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        242 FHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       242 ~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      .|..|+|.|.-..-|.+|+..|...|.|.|.+  |||.|..--+|++|+|+|+|.+||+|..  |+|+|.....|..|++
T Consensus       119 tCrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  119 TCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHHHHH
Confidence            34559999999999999999999999999977  9999999999999999999999999999  9999999999999986


Q ss_pred             CCC------------------CCCCCCCCcccccccccccccccc
Q psy16849        322 CPS------------------ADTSQPFKTWATVVSTYNFTRSTC  348 (371)
Q Consensus       322 ~h~------------------~~c~~~fk~~~~l~~h~~~~~~~~  348 (371)
                      .-|                  .+|++.-.+...++.|+..++-..
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            433                  345555555555666666655444

>KOG1074|consensus

Probab=99.39  E-value=7.6e-13  Score=139.73  Aligned_cols=46  Identities=28%  Similarity=0.499  Sum_probs=35.4

Q ss_pred             CCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        277 GWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       277 gK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      -+...-++.|+.|+|+|+|||||+|++  ||++|.++.+|+.||-.|-
T Consensus       612 ~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHk  657 (958)
T KOG1074|consen  612 LRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHK  657 (958)
T ss_pred             eecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccc
Confidence            333333333888888888888888888  8888888888888887665

>KOG3623|consensus

Probab=99.32  E-value=1.2e-12  Score=136.41  Aligned_cols=80  Identities=30%  Similarity=0.582  Sum_probs=74.8

Q ss_pred             ccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhh
Q psy16849        240 ACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAAT  319 (371)
Q Consensus       240 ~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H  319 (371)
                      +..|..|+|+|...+.|.+|.--|+|.+||+|.+  |.|.|+.+.+|..|+|.|.|||||+|..  |+|+|........|
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCdK--ClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCDK--CLKRFSHSGSYSQH  969 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhhh--hhhhcccccchHhh
Confidence            3445669999999999999999999999999977  9999999999999999999999999999  99999999999999


Q ss_pred             ccCC
Q psy16849        320 AKCP  323 (371)
Q Consensus       320 ~k~h  323 (371)
                      |.-.
T Consensus       970 MNHR  973 (1007)
T KOG3623|consen  970 MNHR  973 (1007)
T ss_pred             hccc
Confidence            9743

>KOG3608|consensus

Probab=99.29  E-value=5.7e-13  Score=129.44  Aligned_cols=144  Identities=22%  Similarity=0.334  Sum_probs=111.9

Q ss_pred             CCCCCcCCCCCCCchhhcccccc------cCCCCCcccCchhHHHHHh-hhcCCCccccccCCCCCcccChhHHHHHhhh
Q psy16849        220 PSKTKTRERRSGSRKKLTSHACF------HPGCGKTYTKSSHLKAHLR-THTGEKPYQCKWKGCGWKFARSDELTRHFRK  292 (371)
Q Consensus       220 p~~c~~c~~~~~~~~~l~~H~c~------h~~Cgk~F~~~s~L~~H~r-~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~  292 (371)
                      +|.|..|.+.|.+++.|+.|+..      |+-|+......+.|..|++ .|...|||+|+  .|++.|.+.++|.+|..+
T Consensus       237 ~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  237 SFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQV  314 (467)
T ss_pred             chHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHHh
Confidence            78899999999999888888644      3448888889999999988 78889999994  499999999999999998


Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC-CCCCCCccccccccccccccccccchhccccCCCccCCCCCCCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD-TSQPFKTWATVVSTYNFTRSTCHLILQAEIGVSLKIVPSSHSRTK  371 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~-c~~~fk~~~~l~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  371 (371)
                      |. +--|+|+.+.|..+|+....|++|++-++.+ .+..   +.+..+-+-|+....  +..+....|...+|++|+||.
T Consensus       315 HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~---Y~CH~Cdr~ft~G~~--L~~HL~kkH~f~~PsGh~RFt  388 (467)
T KOG3608|consen  315 HS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPIL---YACHCCDRFFTSGKS--LSAHLMKKHGFRLPSGHKRFT  388 (467)
T ss_pred             cc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCc---eeeecchhhhccchh--HHHHHHHhhcccCCCCCCcee
Confidence            88 6679999999999999999999999877633 2222   222222334444444  566677788889999999983

>KOG3608|consensus

Probab=99.05  E-value=3.5e-11  Score=117.14  Aligned_cols=124  Identities=23%  Similarity=0.383  Sum_probs=82.5

Q ss_pred             CCCcCCCCCCCchhhccccccc----------CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhh
Q psy16849        222 KTKTRERRSGSRKKLTSHACFH----------PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       222 ~c~~c~~~~~~~~~l~~H~c~h----------~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      -|..|++-|.++..|-.|....          ..|.|.|.....|..|++.|.  .-|+|.+  |+......+.|.+|++
T Consensus       209 ACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCpl--Cdmtc~~~ssL~~H~r  284 (467)
T KOG3608|consen  209 ACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPL--CDMTCSSASSLTTHIR  284 (467)
T ss_pred             ecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccc--cccCCCChHHHHHHHH
Confidence            4555555555555554443221          116666777777777777665  4488855  8888888888888888


Q ss_pred             -hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCccccccccccccccccccch
Q psy16849        292 -KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFTRSTCHLIL  352 (371)
Q Consensus       292 -~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~~~l~~h~~~~~~~~~~~~  352 (371)
                       .|...|||+|..  |+++|.+.++|.+|+..|+ +.-+.|+.-.+.++-+++.....|++.
T Consensus       285 ~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~e  343 (467)
T KOG3608|consen  285 YRHSKDKPFKCDE--CDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLE  343 (467)
T ss_pred             hhhccCCCccccc--hhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHH
Confidence             588899999999  9999999999999998777 334444443333433443333333333

>KOG3623|consensus

Probab=99.01  E-value=1.3e-10  Score=121.34  Aligned_cols=98  Identities=23%  Similarity=0.429  Sum_probs=66.8

Q ss_pred             cCCCCCcccCchhHHHHHh-hhcC-CCccccccCCCCCcccChhHHHHHhhhhc-------------CCCCccCCCCCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLR-THTG-EKPYQCKWKGCGWKFARSDELTRHFRKHT-------------GDRPFQCKPNLVN  307 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r-~Htg-eKpf~C~~~~CgK~F~~ks~L~~H~r~Ht-------------geKPykC~~~~C~  307 (371)
                      |+.|.+.+.+...|+.|+. .|.. +-.|.|.+  |...|..+..|.+|+.+|.             +.|.|+|..  ||
T Consensus       213 cpycdrgykrltslkeHikyrhekne~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtE--Cg  288 (1007)
T KOG3623|consen  213 CPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTE--CG  288 (1007)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhCCCCCcchh--hhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccc--cc
Confidence            3447777777777777765 4432 34477755  7777777777777777663             246677777  77


Q ss_pred             CCCCCcHHHHhhccCCCCCCCCCCCcccccccccccc
Q psy16849        308 PSIKEGKDLAATAKCPSADTSQPFKTWATVVSTYNFT  344 (371)
Q Consensus       308 ksF~~~~~L~~H~k~h~~~c~~~fk~~~~l~~h~~~~  344 (371)
                      |+|+.+..|+.|+|+|+|++.+.|..|.+-|.|-.-.
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSy  325 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSY  325 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccccCCcc
Confidence            7777777777777777777777777766666665544

>KOG1074|consensus

Probab=98.78  E-value=1.8e-09  Score=114.67  Aligned_cols=75  Identities=29%  Similarity=0.598  Sum_probs=71.1

Q ss_pred             CCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC----CccCC---CCCCCCCCCCcHHHHh
Q psy16849        246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR----PFQCK---PNLVNPSIKEGKDLAA  318 (371)
Q Consensus       246 Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK----PykC~---~~~C~ksF~~~~~L~~  318 (371)
                      |-++...++.|+.|.|+|+||+||+|.+  ||+.|..+.+|+.|+-+|...-    +|.|.   +  |.+.|...-.|..
T Consensus       611 C~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~kftn~V~lpQ  686 (958)
T KOG1074|consen  611 CLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQKKFTNAVTLPQ  686 (958)
T ss_pred             eeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhh--hcccccccccccc
Confidence            9999999999999999999999999998  9999999999999999997653    47899   9  9999999999999


Q ss_pred             hccCCC
Q psy16849        319 TAKCPS  324 (371)
Q Consensus       319 H~k~h~  324 (371)
                      |++.|.
T Consensus       687 hIriH~  692 (958)
T KOG1074|consen  687 HIRIHL  692 (958)
T ss_pred             eEEeec
Confidence            999988

>PHA00733 hypothetical protein

Probab=98.57  E-value=4.3e-08  Score=84.58  Aligned_cols=75  Identities=16%  Similarity=0.218  Sum_probs=60.5

Q ss_pred             CCCcccCchhH------HHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhh
Q psy16849        246 CGKTYTKSSHL------KAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAAT  319 (371)
Q Consensus       246 Cgk~F~~~s~L------~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H  319 (371)
                      |.+.|.....|      ..|+.. .+++||.|..  |++.|.....|..|++.|  +++|.|.+  |+++|.....|.+|
T Consensus        46 ~~~~~~~~~~l~~~~~l~~~~~~-~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~~~~sL~~H  118 (128)
T PHA00733         46 VKTLIYNPQLLDESSYLYKLLTS-KAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFRNTDSTLDH  118 (128)
T ss_pred             HhhhccChhhhcchHHHHhhccc-CCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccCCHHHHHHH
Confidence            55555554444      444333 4588999965  999999999999999987  46899999  99999999999999


Q ss_pred             ccCCCCCC
Q psy16849        320 AKCPSADT  327 (371)
Q Consensus       320 ~k~h~~~c  327 (371)
                      +...|+.|
T Consensus       119 ~~~~h~~~  126 (128)
T PHA00733        119 VCKKHNIC  126 (128)
T ss_pred             HHHhcCcc
Confidence            99888766

>PHA02768 hypothetical protein; Provisional

Probab=98.44  E-value=9.6e-08  Score=70.20  Aligned_cols=44  Identities=18%  Similarity=0.418  Sum_probs=37.8

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHH
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLA  317 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~  317 (371)
                      -|.|+.  ||+.|.+.++|..|+++|+  ++|+|..  |++.|.+.+.|-
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--CcccCCc--ccceecccceeE
Confidence            378955  9999999999999999998  7899999  999998877663

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.34  E-value=6.6e-07  Score=93.85  Aligned_cols=104  Identities=13%  Similarity=0.325  Sum_probs=79.1

Q ss_pred             cCCCCCCCchhhcccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCC
Q psy16849        225 TRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPN  304 (371)
Q Consensus       225 ~c~~~~~~~~~l~~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~  304 (371)
                      .|+..+. +..+..|. .|+.|++.|. ...|..|+++|+  +++.|  + ||+.+ .+..|..|+++|.+++++.|.+ 
T Consensus       440 ~Cg~v~~-r~el~~H~-~C~~Cgk~f~-~s~LekH~~~~H--kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f-  509 (567)
T PLN03086        440 GCGIVLR-VEEAKNHV-HCEKCGQAFQ-QGEMEKHMKVFH--EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRF-  509 (567)
T ss_pred             cccceee-ccccccCc-cCCCCCCccc-hHHHHHHHHhcC--CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCC-
Confidence            3777773 44555554 3455999996 678999999985  88999  6 99755 6799999999999999999999 


Q ss_pred             CCCCCCCC----------cHHHHhhccCCCCCCCCCCCcccccccc
Q psy16849        305 LVNPSIKE----------GKDLAATAKCPSADTSQPFKTWATVVST  340 (371)
Q Consensus       305 ~C~ksF~~----------~~~L~~H~k~h~~~c~~~fk~~~~l~~h  340 (371)
                       |++.|..          ...|..|.... +.....|..|+..+.-
T Consensus       510 -C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        510 -CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             -CCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence             9999953          45899998863 5555566666655443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.32  E-value=2.1e-07  Score=58.27  Aligned_cols=26  Identities=38%  Similarity=0.875  Sum_probs=18.8

Q ss_pred             HHHHHhhhhcCCCCccCCCCCCCCCCCC
Q psy16849        285 ELTRHFRKHTGDRPFQCKPNLVNPSIKE  312 (371)
Q Consensus       285 ~L~~H~r~HtgeKPykC~~~~C~ksF~~  312 (371)
                      +|.+|+++|+|+|||+|++  |+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            4677777777777777777  7777753

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.19  E-value=1.8e-06  Score=90.63  Aligned_cols=96  Identities=15%  Similarity=0.290  Sum_probs=77.8

Q ss_pred             cCCCCCCCcCCCCCCCchhhcccccc------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccC--------
Q psy16849        217 INTPSKTKTRERRSGSRKKLTSHACF------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFAR--------  282 (371)
Q Consensus       217 ~~~p~~c~~c~~~~~~~~~l~~H~c~------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~--------  282 (371)
                      ....+.|..|++.|. ...+..|+..      |+ ||+.+ .+..|..|+++|.+++++.|.+  |++.|..        
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~  524 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVR  524 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchh
Confidence            345678999999996 5678888653      45 99765 6689999999999999999988  9999852        


Q ss_pred             --hhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        283 --SDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       283 --ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                        ...|..|...+ |.+++.|..  ||+.|.. .+|..|+.
T Consensus       525 d~~s~Lt~HE~~C-G~rt~~C~~--Cgk~Vrl-rdm~~H~~  561 (567)
T PLN03086        525 DRLRGMSEHESIC-GSRTAPCDS--CGRSVML-KEMDIHQI  561 (567)
T ss_pred             hhhhhHHHHHHhc-CCcceEccc--cCCeeee-hhHHHHHH
Confidence              45899999985 899999999  9987765 56777764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.00  E-value=3.2e-06  Score=52.90  Aligned_cols=26  Identities=58%  Similarity=1.283  Sum_probs=23.4

Q ss_pred             hHHHHHhhhcCCCccccccCCCCCcccC
Q psy16849        255 HLKAHLRTHTGEKPYQCKWKGCGWKFAR  282 (371)
Q Consensus       255 ~L~~H~r~HtgeKpf~C~~~~CgK~F~~  282 (371)
                      +|.+||++|+|++||.|.+  |++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            5899999999999999966  9999963

...

>PHA02768 hypothetical protein; Provisional

Probab=97.87  E-value=7.1e-06  Score=60.41  Aligned_cols=41  Identities=29%  Similarity=0.496  Sum_probs=36.1

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHH
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT  287 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~  287 (371)
                      |+.||+.|.+..+|..||++|+  ++|+|..  |++.|.+.+.|.
T Consensus         8 C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          8 CPICGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             cchhCCeeccHHHHHHHHHhcC--CcccCCc--ccceecccceeE
Confidence            4559999999999999999999  7999954  999999887764

>PHA00733 hypothetical protein

Probab=97.82  E-value=9.1e-06  Score=70.19  Aligned_cols=74  Identities=8%  Similarity=0.066  Sum_probs=55.0

Q ss_pred             CCCccccccCCCCCcccChhHHHHH--hh---hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC-----CCCCCCCCcc
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRH--FR---KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS-----ADTSQPFKTW  334 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H--~r---~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~-----~~c~~~fk~~  334 (371)
                      ..+++.|.+  |.+.|.....|..|  ++   .+.+++||.|..  |++.|.+...|..|++.|.     ..|++.|...
T Consensus        37 ~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~  112 (128)
T PHA00733         37 EQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNT  112 (128)
T ss_pred             hhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCH
Confidence            467899987  99888887777665  22   334589999999  9999999999999998642     3455666666


Q ss_pred             cccccccc
Q psy16849        335 ATVVSTYN  342 (371)
Q Consensus       335 ~~l~~h~~  342 (371)
                      ..|..|..
T Consensus       113 ~sL~~H~~  120 (128)
T PHA00733        113 DSTLDHVC  120 (128)
T ss_pred             HHHHHHHH
Confidence            66655443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.68  E-value=1.6e-05  Score=77.23  Aligned_cols=55  Identities=29%  Similarity=0.637  Sum_probs=47.8

Q ss_pred             CCCccccccCCCCCcccChhHHHHHhhh-h------------------cCCCCccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRHFRK-H------------------TGDRPFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H~r~-H------------------tgeKPykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      ++|||+|.+++|.|.++...-|+-|+.. |                  ...|||+|++  |+|+|+....|+.|.+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            4699999999999999999999999772 2                  1359999999  9999999999999987

>PHA00616 hypothetical protein

Probab=97.67  E-value=1.5e-05  Score=55.99  Aligned_cols=34  Identities=24%  Similarity=0.443  Sum_probs=28.1

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      ||+|.  .||+.|..+..|.+|++.|+|++++.|++
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            57884  48888888888888888888888888875

>PHA00732 hypothetical protein

Probab=97.61  E-value=5e-05  Score=60.24  Aligned_cols=47  Identities=26%  Similarity=0.423  Sum_probs=40.0

Q ss_pred             ccccccCCCCCcccChhHHHHHhh-hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFR-KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r-~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ||.|..  |++.|.+...|+.|++ .|.   ++.|+.  |+++|.   .|..|++.+.
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~---~~~C~~--CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHT---LTKCPV--CNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccC---CCccCC--CCCEeC---ChhhhhcccC
Confidence            588965  9999999999999998 465   368999  999998   5999997655

>KOG3993|consensus

Probab=97.35  E-value=3.1e-05  Score=77.65  Aligned_cols=75  Identities=20%  Similarity=0.357  Sum_probs=48.7

Q ss_pred             CCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhc-------------------------------
Q psy16849        246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHT-------------------------------  294 (371)
Q Consensus       246 Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Ht-------------------------------  294 (371)
                      |...|.....|.+|.-.-.-..-|+|  +.|+|.|.-..+|..|.|=|.                               
T Consensus       273 CK~kYeD~F~LAQHrC~RIV~vEYrC--PEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~  350 (500)
T KOG3993|consen  273 CKEKYEDAFALAQHRCPRIVHVEYRC--PECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGD  350 (500)
T ss_pred             HHHhhhhHHHHhhccCCeeEEeeecC--CcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCC
Confidence            55566666666666432211123666  446666666666666665431                               


Q ss_pred             --CCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        295 --GDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       295 --geKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                        .+.-|.|.+  |+|.|+++..|++|+.+|+
T Consensus       351 dss~gi~~C~~--C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  351 DSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             cccCceeecHH--hhhhhHHHHHHHHhHHhhh
Confidence              123499999  9999999999999988877

>KOG3993|consensus

Probab=97.08  E-value=0.00011  Score=73.74  Aligned_cols=73  Identities=26%  Similarity=0.457  Sum_probs=63.1

Q ss_pred             CCCCCcCCCCCCCchhhcccccc--------cCCCCCcccCchhHHHHHhhhcC--------C-----------------
Q psy16849        220 PSKTKTRERRSGSRKKLTSHACF--------HPGCGKTYTKSSHLKAHLRTHTG--------E-----------------  266 (371)
Q Consensus       220 p~~c~~c~~~~~~~~~l~~H~c~--------h~~Cgk~F~~~s~L~~H~r~Htg--------e-----------------  266 (371)
                      .|.|..|...+...-.|..|+|.        |+.|+|+|....+|..|.|.|..        .                 
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            37899999999999999999885        56799999999999999998852        1                 


Q ss_pred             --------CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        267 --------KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       267 --------Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                              .-|.|.+  |+|.|.+...|+.|+.+|.
T Consensus       347 rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             ccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhh
Confidence                    1388977  9999999999999988775

>PHA00616 hypothetical protein

Probab=96.83  E-value=0.00031  Score=49.45  Aligned_cols=29  Identities=10%  Similarity=0.200  Sum_probs=26.9

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      ||+|..  ||+.|..++.|.+|++.||++..
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCc
Confidence            699999  99999999999999999998754

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.71  E-value=0.0003  Score=42.10  Aligned_cols=22  Identities=14%  Similarity=0.333  Sum_probs=12.0

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |+|..  |++.|.++..|++|++.
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhH
Confidence            44555  55555555555555543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.49  E-value=0.0012  Score=41.11  Aligned_cols=25  Identities=16%  Similarity=0.405  Sum_probs=20.6

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ||+|..  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            578888  8888888888888888775

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.43  E-value=0.00073  Score=40.11  Aligned_cols=23  Identities=22%  Similarity=0.420  Sum_probs=13.1

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      |+|.+  |++.|.+...|++|++.|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            45666  666666666666666544

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.39  E-value=0.0032  Score=46.01  Aligned_cols=50  Identities=16%  Similarity=0.439  Sum_probs=36.5

Q ss_pred             ccccccCCCCCcccChhHHHHHhh-hhcCC-CCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFR-KHTGD-RPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r-~Htge-KPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      .|.|.+  |++ ......|..|.. .|..+ +.+.|++  |...+.  .+|.+|++.+|
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            378877  999 455678888866 45543 5688999  887655  48888887665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.26  E-value=0.0023  Score=38.15  Aligned_cols=23  Identities=43%  Similarity=1.047  Sum_probs=18.0

Q ss_pred             cccccCCCCCcccChhHHHHHhhhh
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      |.|..  |++.|..+..|.+|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            57855  888888888888888765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.03  E-value=0.0081  Score=58.80  Aligned_cols=53  Identities=30%  Similarity=0.661  Sum_probs=42.9

Q ss_pred             cccccccCCCCCcccCchhHHHHHh-hh------------------cCCCccccccCCCCCcccChhHHHHHhh
Q psy16849        237 TSHACFHPGCGKTYTKSSHLKAHLR-TH------------------TGEKPYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       237 ~~H~c~h~~Cgk~F~~~s~L~~H~r-~H------------------tgeKpf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      +.++|.-++|.|.|+....|+-|+. -|                  ...|||+|.+  |+|+++...-|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            4567777889999999999998875 23                  1348999987  9999999999998865

>PHA00732 hypothetical protein

Probab=95.97  E-value=0.0062  Score=48.32  Aligned_cols=45  Identities=33%  Similarity=0.519  Sum_probs=36.1

Q ss_pred             cCCCCCcccCchhHHHHHhh-hcCCCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRT-HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~-HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |..||+.|.....|..|++. |.+   +.|..  |++.|.   .|..|++++.+
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~--CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHTL---TKCPV--CNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccCC---CccCC--CCCEeC---ChhhhhcccCC
Confidence            45699999999999999984 653   58965  999998   58888876553

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.34  E-value=0.0059  Score=48.73  Aligned_cols=71  Identities=15%  Similarity=0.292  Sum_probs=21.9

Q ss_pred             CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ..|+..|.....|..||....+...-      ....+.....+..+.+.-. ...+.|.+  |++.|.....|..||+.+
T Consensus         3 ~~C~~~f~~~~~l~~H~~~~H~~~~~------~~~~l~~~~~~~~~~~~~~-~~~~~C~~--C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    3 LFCDESFSSVDDLLQHMKKKHGFDIP------DQKYLVDPNRLLNYLRKKV-KESFRCPY--CNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccc------ccccccccccccccccccc-CCCCCCCc--cCCCCcCHHHHHHHHcCc
Confidence            34999999999999999754432211      1112223344444443222 23799999  999999999999999864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.11  E-value=0.015  Score=34.22  Aligned_cols=23  Identities=43%  Similarity=0.952  Sum_probs=17.0

Q ss_pred             cccccCCCCCcccChhHHHHHhhhh
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      |.|.+  |++.|.....|..|++.|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            57866  888888888888888766

...

>smart00355 ZnF_C2H2 zinc finger

Probab=94.78  E-value=0.013  Score=34.82  Aligned_cols=24  Identities=13%  Similarity=0.324  Sum_probs=18.3

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |+|..  |+++|.....|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            56777  8888888888888877553

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.66  E-value=0.02  Score=35.42  Aligned_cols=25  Identities=36%  Similarity=0.804  Sum_probs=21.2

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      +|.|..  |++.|.....|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            578965  9999999999999998775

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.62  E-value=0.022  Score=45.32  Aligned_cols=69  Identities=20%  Similarity=0.348  Sum_probs=21.4

Q ss_pred             CCCcCCCCCCCchhhcccccccCC----CCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhh
Q psy16849        222 KTKTRERRSGSRKKLTSHACFHPG----CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       222 ~c~~c~~~~~~~~~l~~H~c~h~~----Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      .|..|+..|.....+..|+...++    ....+.....+..+++.-. ...+.|.+  |++.|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~C~~--C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKV-KESFRCPY--CNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccccccccccccccccccccccc-CCCCCCCc--cCCCCcCHHHHHHHHcCc
Confidence            478899999999999999865433    1122223333444433222 23699977  999999999999999965

>PRK04860 hypothetical protein; Provisional

Probab=94.45  E-value=0.02  Score=51.43  Aligned_cols=40  Identities=25%  Similarity=0.587  Sum_probs=32.6

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHH
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKD  315 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~  315 (371)
                      +|.|  . |++   ....+++|.++|+|+++|.|..  |+..|.....
T Consensus       119 ~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~--C~~~l~~~~~  158 (160)
T PRK04860        119 PYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRR--CGETLVFKGE  158 (160)
T ss_pred             EEEc--C-CCC---eeCHHHHHHHHhcCCccEECCC--CCceeEEecc
Confidence            5888  4 887   7778899999999999999999  8888876543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.72  E-value=0.028  Score=55.28  Aligned_cols=74  Identities=34%  Similarity=0.562  Sum_probs=61.8

Q ss_pred             ccCCCCCcccCchhHHHHHh--hhcCC--CccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHH
Q psy16849        242 FHPGCGKTYTKSSHLKAHLR--THTGE--KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKD  315 (371)
Q Consensus       242 ~h~~Cgk~F~~~s~L~~H~r--~Htge--Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~  315 (371)
                      .+..|...|.....|..|.+  .|+++  +++.|.+..|++.|.+...+.+|..+|++.+++.|....|.+.+.....
T Consensus       291 ~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         291 KSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            34559999999999999999  89999  9999972249999999999999999999988888888777776666555

>smart00355 ZnF_C2H2 zinc finger

Probab=93.56  E-value=0.065  Score=31.72  Aligned_cols=24  Identities=38%  Similarity=0.765  Sum_probs=18.6

Q ss_pred             cccccCCCCCcccChhHHHHHhhhhc
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |.|..  |++.|.....|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            46755  8888888888888888664

>KOG2231|consensus

Probab=93.42  E-value=0.076  Score=57.17  Aligned_cols=52  Identities=27%  Similarity=0.309  Sum_probs=31.5

Q ss_pred             ccccCCCCCcccChhHHHHHhhhhcCCCCccCCCC----CCCCCCCCcHHHHhhccCCCCCC
Q psy16849        270 QCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPN----LVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       270 ~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~----~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      .|.+  |...|.....|.+|++.+.    |.|.+|    |+..-|....+|+.|.+-+|--|
T Consensus       184 ~C~~--C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~HflC  239 (669)
T KOG2231|consen  184 LCKF--CHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLC  239 (669)
T ss_pred             cchh--hhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCccc
Confidence            4545  6666666677776666543    555553    24556666677777776666333

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=93.41  E-value=0.12  Score=37.56  Aligned_cols=47  Identities=34%  Similarity=0.571  Sum_probs=35.2

Q ss_pred             cCCCCCcccCchhHHHHHh-hhcCC-CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        243 HPGCGKTYTKSSHLKAHLR-THTGE-KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r-~Htge-Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |+.|++ ......|..|.. .|..+ +.+.|.+  |...+.  .+|.+|+..+.
T Consensus         5 CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    5 CPYCGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            445999 566788999966 56554 5799976  998655  49999998764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.32  E-value=0.053  Score=39.41  Aligned_cols=32  Identities=31%  Similarity=0.607  Sum_probs=15.0

Q ss_pred             CCCccccccCCCCCcccChhHHHHHhhhhcCCCC
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP  298 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKP  298 (371)
                      .+.|-.|.+  |+..+.+..+|++|+..+++.||
T Consensus        21 S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            355566643  66666666666666655555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.83  E-value=0.052  Score=53.29  Aligned_cols=64  Identities=30%  Similarity=0.522  Sum_probs=55.2

Q ss_pred             CccccccCCCCCcccChhHHHHHhh--hhcCC--CCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFR--KHTGD--RPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r--~Htge--KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .++.|..  |...|.+...|.+|.+  .|.++  +++.|.+..|++.|.+...|.+|...|.+.....+.
T Consensus       288 ~~~~~~~--~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQ--CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCcc--ccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            5688854  9999999999999999  89999  999999444999999999999999999865544333

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.28  E-value=0.045  Score=33.16  Aligned_cols=22  Identities=23%  Similarity=0.401  Sum_probs=15.9

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |.|.+  |++.|.....|+.|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            56777  77777777777777764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.33  E-value=0.057  Score=39.23  Aligned_cols=32  Identities=13%  Similarity=0.313  Sum_probs=23.1

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +..+.|-.|++  |+..+.+..+|+||+..+|+.
T Consensus        19 ~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   19 SQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             CTTS--EE-TT--T--EESSHHHHHHHHHHHTTT
T ss_pred             hccCCCCCCCc--chhhccchhhHHHHHHHHhcc
Confidence            34578999999  999999999999999877743

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=91.25  E-value=0.04  Score=33.19  Aligned_cols=22  Identities=18%  Similarity=0.282  Sum_probs=10.8

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      |+|..  |+.... +..|.+|++.|
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhh
Confidence            45555  555555 55555555544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=90.78  E-value=0.15  Score=31.73  Aligned_cols=22  Identities=18%  Similarity=0.383  Sum_probs=19.1

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |-|.+  |++.|.....|..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            67888  99999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=90.61  E-value=0.21  Score=53.88  Aligned_cols=110  Identities=19%  Similarity=0.393  Sum_probs=73.6

Q ss_pred             CCCCcCCCCCCCchhhcccccccCCCCCcccCchhHHHHHh-hhcCCCccccccCCC---------CCcccChhHHHHHh
Q psy16849        221 SKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLR-THTGEKPYQCKWKGC---------GWKFARSDELTRHF  290 (371)
Q Consensus       221 ~~c~~c~~~~~~~~~l~~H~c~h~~Cgk~F~~~s~L~~H~r-~HtgeKpf~C~~~~C---------gK~F~~ks~L~~H~  290 (371)
                      ..|..|.+.+..  .+..+.|.+  | -.|.....|+.|++ .|.   -+.|.+  |         .....++..|..|+
T Consensus       100 ~~C~~C~~~~~~--~~~~~~~~~--c-~~~~s~~~Lk~H~~~~H~---~~~c~l--C~~~~kif~~e~k~Yt~~el~~h~  169 (669)
T KOG2231|consen  100 HSCHICDRRFRA--LYNKKECLH--C-TEFKSVENLKNHMRDQHK---LHLCSL--CLQNLKIFINERKLYTRAELNLHL  169 (669)
T ss_pred             hhcCccccchhh--hcccCCCcc--c-cchhHHHHHHHHHHHhhh---hhcccc--ccccceeeeeeeehehHHHHHHHH
Confidence            689999988753  455666766  8 88889999999996 442   245543  3         22344577888888


Q ss_pred             hhhc-CCCC----ccCCCCCCCCCCCCcHHHHhhccCCC-----CC----CCCCCCcccccccccc
Q psy16849        291 RKHT-GDRP----FQCKPNLVNPSIKEGKDLAATAKCPS-----AD----TSQPFKTWATVVSTYN  342 (371)
Q Consensus       291 r~Ht-geKP----ykC~~~~C~ksF~~~~~L~~H~k~h~-----~~----c~~~fk~~~~l~~h~~  342 (371)
                      ..-. +++.    -.|.+  |...|-....|.+|++.+|     .+    +..-|.....|..|.+
T Consensus       170 ~~gd~d~~s~rGhp~C~~--C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR  233 (669)
T KOG2231|consen  170 MFGDPDDESCRGHPLCKF--CHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFR  233 (669)
T ss_pred             hcCCCccccccCCccchh--hhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhh
Confidence            7422 1222    36999  9999999999999998444     32    3334555555555533

>KOG4173|consensus

Probab=89.61  E-value=0.074  Score=49.29  Aligned_cols=80  Identities=23%  Similarity=0.439  Sum_probs=62.8

Q ss_pred             ccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhh-h---------cCCCCccCCCCCCCCC
Q psy16849        240 ACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK-H---------TGDRPFQCKPNLVNPS  309 (371)
Q Consensus       240 ~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~-H---------tgeKPykC~~~~C~ks  309 (371)
                      .|.-.+|-..|....+...|-.+-++   -.|..  |.+.|.+...|..|+.- |         -|.--|+|-++||+..
T Consensus        81 ~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   81 ACQVAGCCQVFDALDDYEHHYHTLHG---NSCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccchHHHHhhhhhHHHhhhhccc---chhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            45556688999888888887653332   37977  99999999999999773 2         2444599999999999


Q ss_pred             CCCcHHHHhhccCCC
Q psy16849        310 IKEGKDLAATAKCPS  324 (371)
Q Consensus       310 F~~~~~L~~H~k~h~  324 (371)
                      |++..+.++|+-.-|
T Consensus       156 FkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhHHHHhc
Confidence            999999999986555

>PRK04860 hypothetical protein; Provisional

Probab=87.84  E-value=0.3  Score=43.82  Aligned_cols=40  Identities=23%  Similarity=0.476  Sum_probs=31.1

Q ss_pred             cccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChh
Q psy16849        239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSD  284 (371)
Q Consensus       239 H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks  284 (371)
                      |...|. |++   ....+.+|.++|+++++|.|..  |++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~--C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRR--CGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCC--CCceeEEec
Confidence            333444 776   6668999999999999999955  999887654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=87.57  E-value=0.34  Score=29.18  Aligned_cols=23  Identities=26%  Similarity=0.744  Sum_probs=18.9

Q ss_pred             cccccCCCCCcccChhHHHHHhhhh
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      |.|.+  |++.|.....|+.|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            56866  999999999999998754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=85.48  E-value=0.56  Score=28.05  Aligned_cols=23  Identities=30%  Similarity=0.924  Sum_probs=16.0

Q ss_pred             cccccCCCCCcccChhHHHHHhhhhc
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |+|.+  |+.... +..|.+|++.|.
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            57865  888877 888888888754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=83.07  E-value=0.81  Score=29.67  Aligned_cols=23  Identities=26%  Similarity=0.362  Sum_probs=20.1

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      +|.|.+  |++.|.....++.|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            588999  99999999999999874

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=80.85  E-value=0.54  Score=53.94  Aligned_cols=72  Identities=21%  Similarity=0.459  Sum_probs=56.2

Q ss_pred             CCCcccCchhHHHHHh-hhcCCCccccccCCCCCcccChhHHHHHhhh-h------------------------cCCCCc
Q psy16849        246 CGKTYTKSSHLKAHLR-THTGEKPYQCKWKGCGWKFARSDELTRHFRK-H------------------------TGDRPF  299 (371)
Q Consensus       246 Cgk~F~~~s~L~~H~r-~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~-H------------------------tgeKPy  299 (371)
                      |+..+.+...+..|++ .|+-.|-++|  +.|++.|.....|..|+|. |                        .+-+||
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~c--pkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~  519 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKC--PKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPY  519 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccC--CccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcc
Confidence            6666666666666655 5666677888  5588888888888888886 1                        124789


Q ss_pred             cCCCCCCCCCCCCcHHHHhhcc
Q psy16849        300 QCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       300 kC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      .|..  |..++..+.+|-+|++
T Consensus       520 ~C~~--C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  520 PCRA--CNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccee--eeeeeecchHHHHHHH
Confidence            9999  9999999999999986

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=80.25  E-value=0.87  Score=28.16  Aligned_cols=22  Identities=23%  Similarity=0.694  Sum_probs=18.0

Q ss_pred             cccccCCCCCcccChhHHHHHhhh
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRK  292 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~  292 (371)
                      |-|..  |++.|.....+..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            67866  99999999998888874

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	371
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-31
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-31
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-27
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		5e-21
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-17
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-12
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-12
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-12
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-12
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		6e-12
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		8e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		8e-12
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-11
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-11
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-09
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		6e-09
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-08
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-08
2ent_A	48	Solution Structure Of The Second C2h2-Type Zinc Fin		2e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-08
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-08
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-06
1va1_A	37	Solution Structure Of Transcription Factor Sp1 Dna		6e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		6e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		6e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		6e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-05
1sp2_A	31	Nmr Structure Of A Zinc Finger Domain From Transcri		4e-05
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		1e-04
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		1e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-04

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/69 (79%), Positives = 60/69 (86%)
Query: 234 KKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           K+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDELTRH+RKH
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 294 TGDRPFQCK 302
           TG RPFQC+
Sbjct: 61  TGHRPFQCQ 69

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score =  131 bits (330), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/72 (79%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Query: 231 GSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF 290
           GSR    +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDELTRH+
Sbjct: 1   GSRT--ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 58
Query: 291 RKHTGDRPFQCK 302
           RKHTG RPFQC+
Sbjct: 59  RKHTGHRPFQCQ 70

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           H C +PGC K YTKSSHLKAHLRTHTGEKPY+C W+GC W+FARSDELTRH+RKHTG +P
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75
Query: 299 FQCKPNLVNPSIKEGKDLAATAK 321
           FQC   + N S      LA   K
Sbjct: 76  FQC--GVCNRSFSRSDHLALHMK 96

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 235 KLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           ++ SH C HPGCGKTY KSSHLKAH RTHTGEKP+ C WKGC  +FARSDEL+RH R H
Sbjct: 14  RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C +PGC K Y K SHL+ H R HTGEKPYQC +K C  +F+RSD+L RH R+HTG +PFQ
Sbjct: 9   CAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ 68
Query: 301 CK 302
           CK
Sbjct: 69  CK 70

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Query: 244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           P CGK++++ +HL+AH RTHTGEKPY+C    CG  F+R D L  H R HTG++P++C
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPYKC 164

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNL 305
           CGK + +SS LK H   HTGEKP+QC ++GCG +F+    L  H R HTGDRP+ C  + 
Sbjct: 40  CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 99
Query: 306 VNPSIKEGKDLAA 318
            N    +  +L +
Sbjct: 100 CNKKFAQSTNLKS 112

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S+ L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           P CGK++++SS+L+ H RTHTGEKPY+C    CG  F++S +L +H R HTG++P++C
Sbjct: 8   PECGKSFSQSSNLQKHQRTHTGEKPYKCPE--CGKSFSQSSDLQKHQRTHTGEKPYKC 63

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S+ L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + ++ SS+L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S  L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S  L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S  L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 4   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 61
Query: 299 FQC 301
           F C
Sbjct: 62  FAC 64

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S  L  H+R HTG+KP+QC+   C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 239 HACFHPGC---GKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           H C+   C   GK++     L  H+R HTGEKP+ C + GCG  FARS+ L  H R HTG
Sbjct: 58  HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117
Query: 296 DRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP 330
           ++PF+C+    +       D        ++D S P
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP 152

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 231 GSRKKLTSHACFHPGCGKT---YTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
           G RK+   H     GC +    +     L  H+R HTGEKP++C ++GC   ++R + L 
Sbjct: 30  GERKEFVCHW---GGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK 86
Query: 288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLA 317
            H R HTG++P+ C+    + +     D A
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRA 116

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK +++   LK H+R HTG KPY+CK   C +  A S  L +H R H+ +RPF+C+
Sbjct: 14  CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQ 68

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++ ++L  H+R HTG+KP+QC+   C   F++   L +H R HTG++P
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQHTGLNQHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++ ++L  H+R HTG+KP+QC+   C   F++   L  H R HTG++P
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQQASLNAHIRTHTGEKP 62
Query: 299 FQC 301
           F C
Sbjct: 63  FAC 65

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH 289
           C + +++S HL  H+RTHTGEKP+ C    CG KFARSDE  RH
Sbjct: 9   CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRH 50

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 235 KLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHT 294
           K+  +AC    C + +++S  L  H+R HTG+KP+QC+   C   F+RSD LT H R HT
Sbjct: 16  KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT 73

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C    CG  Y K+  L+AHL  HTGEKP+ CK +GC   F     LTRH   HTG++ F 
Sbjct: 6   CSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 65
Query: 301 CKPNLVNPSIKEGKDLAATAK 321
           C          +G DL  T K
Sbjct: 66  CDS--------DGCDLRFTTK 78

>pdb|2ENT|A Chain A, Solution Structure Of The Second C2h2-Type Zinc Finger Domain From Human Krueppel-Like Factor 15 Length = 48

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           EKP+ C W GCGW+F+RSDEL+RH R H+G +P
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP 42

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           CGK+++ SS L  H RTHTGEKPY+C    CG  F +   L  H R HTG  P
Sbjct: 24  CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNL 305
           CG  Y K+  L+AHL  HTGEKP+ CK +GC   F     LTRH   HTG++ F C    
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS-- 77
Query: 306 VNPSIKEGKDLAATAK 321
                 +G DL  T K
Sbjct: 78  ------DGCDLRFTTK 87

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD--RPFQC-- 301
           CGK +    HL  H  +H+GEKPY C    CG +F R D ++ H R H G   +P+ C  
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70
Query: 302 ------KPNLVNPSIKE 312
                 +P+ +N  IK+
Sbjct: 71  CGKGFSRPDHLNGHIKQ 87

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CG+ +TKS +L  H RTHT E+PY C    C   F R D L  H   H+ ++PF+C+
Sbjct: 23  CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

>pdb|1VA1|A Chain A, Solution Structure Of Transcription Factor Sp1 Dna Binding Domain (Zinc Finger 1) Length = 37

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 235 KLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEK 267
           K   H C   GCGK Y K+SHL+AHLR HTGE+
Sbjct: 5   KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK-HTGD 296
           C + + +  HLK H R+HT EKPY C    C   F R D L RH +K H+G+
Sbjct: 8   CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK++ +SS L  HL  H+  +PY C++  CG +F +  ++ +H   HTG++P +C+
Sbjct: 7   CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHT 294
           CGK +++SS L  H R HTGEKPY+C    CG  F+++  L  H R HT
Sbjct: 20  CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHT 66

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           CGK +  + +L  HLRTHTGEKPY+C++  C +  A+   L  H  +H
Sbjct: 10  CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERH 55

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           CGK++T  S    H+  H G +PY C    CG KF     L  H + HTG +P++C
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYEC 68

>pdb|1SP2|A Chain A, Nmr Structure Of A Zinc Finger Domain From Transcription Factor Sp1f2, Minimized Average Structure Length = 31

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           +P+ C W  CG +F RSDEL RH R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           + C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           + C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           C  ++    +L +H   HTGEKPY+C    CG +F R   L  H R H+G++P
Sbjct: 23  CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP 73

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	371
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-46
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-40
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-40
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-16
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-29
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-29
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-24
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-27
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-27
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-24
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-21
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-18
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-19
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-20
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-17
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-17
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-13
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	4e-17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-14
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-14
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-14
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-14
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-14
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-14
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-13
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-10
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	6e-10
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-08
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	3e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-06
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	4e-06
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	3e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-05
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	2e-04

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  152 bits (385), Expect = 4e-46
 Identities = 51/75 (68%), Positives = 58/75 (77%)

Query: 228 RRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
                 +K   H C +PGC K YTKSSHLKAHLRTHTGEKPY+C W+GC W+FARSDELT
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64

Query: 288 RHFRKHTGDRPFQCK 302
           RH+RKHTG +PFQC 
Sbjct: 65  RHYRKHTGAKPFQCG 79

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 87.3 bits (217), Expect = 1e-21
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHT 294
           + C   GC   + +S  L  H R HTG KP+QC    C   F+RSD L  H ++H 
Sbjct: 46  YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG--VCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 249 TYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   S       R H  + P      GC   + +S  L  H R HTG++P++C
Sbjct: 2   SSGSSGPDLEKRRIHYCDYP------GCTKVYTKSSHLKAHLRTHTGEKPYKC 48

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  149 bits (379), Expect = 2e-45
 Identities = 55/69 (79%), Positives = 60/69 (86%)

Query: 234 KKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           K+  +H C + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDELTRH+RKH
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 294 TGDRPFQCK 302
           TG RPFQC+
Sbjct: 61  TGHRPFQCQ 69

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 85.3 bits (212), Expect = 6e-21
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           + C   GCG  + +S  L  H R HTG +P+QC+   C   F+RSD L  H ++H
Sbjct: 36  YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ--KCDRAFSRSDHLALHMKRH 88

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score =  135 bits (342), Expect = 5e-40
 Identities = 46/73 (63%), Positives = 52/73 (71%), Gaps = 2/73 (2%)

Query: 221 SKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKF 280
           S   +  +   SR +  SH C HPGCGKTY KSSHLKAH RTHTGEKP+ C WKGC  +F
Sbjct: 2   SSGSSGPQIDSSRIR--SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF 59

Query: 281 ARSDELTRHFRKH 293
           ARSDEL+RH R H
Sbjct: 60  ARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 76.3 bits (188), Expect = 7e-18
 Identities = 16/49 (32%), Positives = 23/49 (46%)

Query: 253 SSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           SS         +  + + C   GCG  + +S  L  H R HTG++PF C
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSC 50

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  135 bits (341), Expect = 8e-40
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           + C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 299 FQC 301
            + 
Sbjct: 62  KKD 64

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 71.5 bits (176), Expect = 5e-16
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK 292
           + C H GC K ++  S LK H + H G    +     C +         +H  +
Sbjct: 32  YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD--SCSFVGKTWTLYLKHVAE 83

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score =  107 bits (269), Expect = 1e-29
 Identities = 23/44 (52%), Positives = 31/44 (70%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP+ C W GCGW+F+RSDEL+RH R H+G +P   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 60.4 bits (147), Expect = 2e-12
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQC 271
            AC  PGCG  +++S  L  H R+H+G KP   
Sbjct: 13  FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  109 bits (275), Expect = 1e-29
 Identities = 39/64 (60%), Positives = 47/64 (73%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
             C +PGC K Y K SHL+ H R HTGEKPYQC +K C  +F+RSD+L RH R+HTG +P
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 299 FQCK 302
           FQCK
Sbjct: 67  FQCK 70

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 95.7 bits (239), Expect = 2e-24
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C    C + +++S  LK H R HTG KP+QCK   C  KF+RSD L  H R HTG++PF 
Sbjct: 39  CDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLKTHTRTHTGEKPFS 96

Query: 301 CKP 303
           C+ 
Sbjct: 97  CRW 99

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 84.1 bits (209), Expect = 4e-20
 Identities = 28/48 (58%), Positives = 34/48 (70%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           C + +++S HLK H RTHTGEKP+ C+W  C  KFARSDEL RH   H
Sbjct: 72  CQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.1 bits (157), Expect = 6e-13
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query: 264 TGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           + ++P+ C + GC  ++ +   L  H RKHTG++P+QC
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQC 39

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score =  101 bits (253), Expect = 4e-27
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 252 KSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
             ++L  ++      +PY C  + C  +F+RSDELTRH R HTG +PFQC+
Sbjct: 5   PMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR 53

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 84.3 bits (209), Expect = 1e-20
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 220 PSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWK 279
           P            + +   +AC    C + +++S  L  H+R HTG+KP+QC  + C   
Sbjct: 3   PHPMNNLLNYVVPKMR--PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRN 58

Query: 280 FARSDELTRHFRKHT 294
           F+RSD LT H R HT
Sbjct: 59  FSRSDHLTTHIRTHT 73

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score =  101 bits (253), Expect = 6e-27
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 241 CFHPGCGKTYTKSSHLKAHLR-THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF 299
           C  PGCG+ ++   +L  H +  H  +K + C    CG  F     L  H + H+  R +
Sbjct: 10  CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 69

Query: 300 QCK 302
            C+
Sbjct: 70  ICE 72

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFR-KHTGDRPFQCK 302
            +G     C + GCG  F+    L  H + +H   + F C 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP 42

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 68.0 bits (167), Expect = 7e-15
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGC 276
            +C  P CGK++    HLK H++ H+  + Y C++ G 
Sbjct: 39  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP 76

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  103 bits (259), Expect = 7e-27
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
             C  PGCGK + +S +LK H RTHTGEKP++C+++GC  +FA S +  +H   HT D+ 
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150

Query: 299 FQC 301
              
Sbjct: 151 GPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 94.3 bits (235), Expect = 2e-23
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 231 GSRKKLTSHACFHPGC---GKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
               +  +H C+   C   GK++     L  H+R HTGEKP+ C + GCG  FARS+ L 
Sbjct: 50  VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLK 109

Query: 288 RHFRKHTGDRPFQCKPN 304
            H R HTG++PF+C+  
Sbjct: 110 IHKRTHTGEKPFKCEFE 126

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 81.9 bits (203), Expect = 6e-19
 Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 15/88 (17%)

Query: 230 SGSRKKLTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQ----CKWKGC- 276
               K+  S               C +T++    L  H+       P Q    C W+ C 
Sbjct: 7   GQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP 66

Query: 277 --GWKFARSDELTRHFRKHTGDRPFQCK 302
             G  F    +L  H R HTG++PF C 
Sbjct: 67  REGKSFKAKYKLVNHIRVHTGEKPFPCP 94

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.8 bits (174), Expect = 6e-15
 Identities = 9/57 (15%), Positives = 13/57 (22%), Gaps = 2/57 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            G +        +       +       K C   F+   EL  H        P Q  
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNN 57

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  100 bits (251), Expect = 2e-25
 Identities = 29/62 (46%), Positives = 35/62 (56%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C    CG  Y K+  L+AHL  HTGEKP+ CK +GC   F     LTRH   HTG++ F 
Sbjct: 15  CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 74

Query: 301 CK 302
           C 
Sbjct: 75  CD 76

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG--DRP 298
           C   GC K +T   HL  H  THTGEK + C   GC  +F     + +HF +        
Sbjct: 45  CKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICV 104

Query: 299 FQC 301
           + C
Sbjct: 105 YVC 107

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 21/61 (34%), Positives = 31/61 (50%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G    +
Sbjct: 107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 166

Query: 301 C 301
            
Sbjct: 167 D 167

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 89.2 bits (222), Expect = 3e-21
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEK--PYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           C   GC   +T  +++K H       K   Y C ++ CG  F + ++L  H   HT   P
Sbjct: 75  CDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP 134

Query: 299 FQCK 302
           ++C 
Sbjct: 135 YECP 138

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
                    K Y C +  CG  + ++ +L  H  KHTG++PF CK
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCK 46

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 7/57 (12%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTG---EKPYQCKWKGCGWKFARSDELTRHFRKHT 294
           C H GC K ++  S LK H + H G   +K   C +   G  +  +  L      H 
Sbjct: 137 CPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF--VGKTW--TLYLKHVAECHQ 189

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 99.2 bits (248), Expect = 3e-25
 Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH-FRKHTGDR 297
           H C   GC K+Y++  +LK HLR+HTGEKPY C+ +GC   F+ + +  +H  R H+ ++
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127

Query: 298 PFQCK 302
           P+ CK
Sbjct: 128 PYVCK 132

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 93.0 bits (232), Expect = 5e-23
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
                  + +     L  H+R HTGEKP++C ++GC   ++R + L  H R HTG++P+ 
Sbjct: 40  GGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYM 99

Query: 301 CK 302
           C+
Sbjct: 100 CE 101

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 85.0 bits (211), Expect = 4e-20
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 241 CFHPGCGKTYTKSSHLKAH-LRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           C H GC K ++ +S    H  RTH+ EKPY CK  GC  ++     L +H +   G
Sbjct: 100 CEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 241 CFHPGCGKTYTKSSHLKAHL---RTHTGEKPYQCKWKGCGWK---FARSDELTRHFRKHT 294
           C   GC + +     L  H+     H   K + C W GC  +   F     L  H R+HT
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 295 GDRPFQCK 302
           G++P +C 
Sbjct: 64  GEKPHKCT 71

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTG 265
           + C  PGC K YT  S L+ H++T  G
Sbjct: 129 YVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 5/40 (12%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRK---HTGDRPFQCK 302
           E     +W GC  +F   ++L  H      H   + F C 
Sbjct: 1   ETDC--RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCH 38

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 97.6 bits (244), Expect = 5e-25
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPN 304
           CGK + +SS LK H   HTGEKP+QC ++GCG +F+    L  H R HTGDRP+ C  +
Sbjct: 40  CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 98

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 95.3 bits (238), Expect = 3e-24
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ 300
           C   GCGK ++   +L+ H+R HTG++PY C + GC  KFA+S  L  H   H   +  Q
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 87.6 bits (218), Expect = 2e-21
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
            AC H GC K +  +S ++ HL TH G + + C    CG  F  S +L RH   HTG++P
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKP 62

Query: 299 FQC 301
           FQC
Sbjct: 63  FQC 65

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.4 bits (119), Expect = 8e-08
 Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            +   C  KGC   F  +  + +H   H G R   C 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA 38

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.1 bits (230), Expect = 1e-23
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +AC    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 299 FQCK 302
           F C 
Sbjct: 63  FACD 66

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 82.9 bits (206), Expect = 5e-20
 Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 10/68 (14%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
           LT H   H G        C + +++S HL  H+RTHTGEKP+ C    CG KFARSDE  
Sbjct: 22  LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERK 79

Query: 288 RHFRKHTG 295
           RH + H  
Sbjct: 80  RHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           E+PY C  + C  +F++S  LTRH R HTG +PFQC+
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR 38

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 8/40 (20%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEK 267
           LT+H   H G        CG+ + +S   K H + H  +K
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 89.4 bits (223), Expect = 2e-22
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK +++   LK H+R HTG KPY+C  K C +  A S  L +H R H+ +RPF+C+
Sbjct: 14  CGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 87.9 bits (219), Expect = 7e-22
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 235 KLTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDEL 286
           KL +H   H G        C      SS L  HLR H+ E+P++C+   C +    S +L
Sbjct: 23  KLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQL 80

Query: 287 TRHFRKHTGDRPFQC 301
           T H R HTGD     
Sbjct: 81  TVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.8 bits (154), Expect = 1e-12
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           +     P++C  + CG  F+R D+L  H R HTG +P++CK
Sbjct: 2   SSGSSGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKCK 40

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 88.6 bits (221), Expect = 6e-22
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
            +                CG+ +TKS +L  H RTHT E+PY C    C   F R D L 
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLR 62

Query: 288 RHFRKHTGDRPFQCK 302
            H   H+ ++PF+C+
Sbjct: 63  DHRYIHSKEKPFKCQ 77

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 84.4 bits (210), Expect = 2e-20
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           C K + +  HL+ H   H+ EKP++C+   CG  F +S  L  H   H        
Sbjct: 51  CHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 74.8 bits (185), Expect = 6e-17
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 253 SSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           SS           +K + C  K CG  F +S  L  H R HT +RP+ C 
Sbjct: 2   SSGSSGGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCD 49

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.5 bits (135), Expect = 4e-10
 Identities = 10/44 (22%), Positives = 12/44 (27%), Gaps = 8/44 (18%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           L  H   H          CGK + +S  L  H   H        
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 86.7 bits (216), Expect = 2e-21
 Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK++ +SS L  HL  H+  +PY C++  CG +F +  ++ +H   HTG++P +C+
Sbjct: 7   CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 77.8 bits (193), Expect = 2e-18
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           CGK + + S +K H   HTGEKP++C+   CG  F++S  L  H RKHTG
Sbjct: 35  CGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.9 bits (92), Expect = 2e-04
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 8/38 (21%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTG 265
           +  H   H G        CGK +++SS+L  H R HTG
Sbjct: 45  MKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.0 bits (222), Expect = 3e-21
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 13/83 (15%)

Query: 228 RRSGSRKKLTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWK 279
             S S     + A   PG        CGK++++S HL  H RTHTGEKPY+C    CG  
Sbjct: 4   FGSSS---SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKS 58

Query: 280 FARSDELTRHFRKHTGDRPFQCK 302
           F+   +LTRH R HTG++P++C 
Sbjct: 59  FSDKKDLTRHQRTHTGEKPYKCP 81

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.1 bits (217), Expect = 1e-20
 Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 2/57 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK++++ +HL+AH RTHTGEKPY+C    CG  F+R D L  H R HTG++P++C 
Sbjct: 111 CGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKPYKCP 165

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 86.7 bits (216), Expect = 3e-20
 Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK++++ ++L+AH RTHTGEKPY C    CG  F++   L  H R HTG++P++C 
Sbjct: 83  CGKSFSQRANLRAHQRTHTGEKPYAC--PECGKSFSQLAHLRAHQRTHTGEKPYKCP 137

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           CGK++++  +L  H RTHTGEKPY+C    CG  F+R D L  H R HTG + 
Sbjct: 139 CGKSFSREDNLHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 78.3 bits (194), Expect = 3e-17
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 249 TYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           +   SS   A      GEKPY C    CG  F+RSD L  H R HTG++P++C 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCP 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 85.6 bits (213), Expect = 4e-21
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           C + +++S HL  H+RTHTGEKP+ C    CG KFARSDE  RH        P    
Sbjct: 9   CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHI-LPILED 62

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 65.2 bits (160), Expect = 1e-13
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 6/55 (10%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH---FRKHTGDR 297
           CG+ + +S   K H        P            +++  L       +K  G+R
Sbjct: 37  CGRKFARSDERKRHRDIQH-ILPILED--KVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.6 bits (117), Expect = 6e-08
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           KP+QC  + C   F+RSD LT H R HTG++PF C 
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACD 35

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 86.0 bits (214), Expect = 6e-21
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK++T  S    H+  H G +PY C    CG KF     L  H + HTG +P++C 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECN 69

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 80.2 bits (199), Expect = 8e-19
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 12/75 (16%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
              H   H G        CGK +    HL  H++ HTG KPY+C    C  +F   D   
Sbjct: 25  RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSF- 81

Query: 288 RHFRKHTGDRPFQCK 302
            H    +  + ++  
Sbjct: 82  -HRHVTSCTKSYEAA 95

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
              +G+K Y C+   CG  F    +  RH   H G RP+ C 
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCG 41

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 84.8 bits (211), Expect = 8e-21
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG--DRPFQCK 302
           CGK +    HL  H  +H+GEKPY C    CG +F R D ++ H R H G   +P+ C+
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 71.0 bits (175), Expect = 9e-16
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 13/71 (18%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGE--KPYQCKWKGCGWKFARSDE 285
           L  H   H G        CG  + +   +  H+R+H G   KPY C+   CG  F+R D 
Sbjct: 23  LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ--SCGKGFSRPDH 80

Query: 286 LTRHFRK-HTG 295
           L  H ++ H+G
Sbjct: 81  LNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.8 bits (146), Expect = 9e-12
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            +G     C  + CG  F     L RH   H+G++P+ C 
Sbjct: 2   SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCP 39

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 246 CGKTYTKSSHLKAHL-RTHTGEK 267
           CGK +++  HL  H+ + H+G  
Sbjct: 71  CGKGFSRPDHLNGHIKQVHSGPS 93

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 82.9 bits (206), Expect = 2e-20
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK-HTGD 296
           C + + +  HLK H R+HT EKPY C    C   F R D L RH +K H+G+
Sbjct: 8   CTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           + + C+   C   FAR + L RH+R HT ++P+ C 
Sbjct: 1   RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCG 34

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 6/23 (26%), Positives = 11/23 (47%), Gaps = 1/23 (4%)

Query: 246 CGKTYTKSSHLKAHL-RTHTGEK 267
           C + +T+   L  H  + H+G  
Sbjct: 36  CNRAFTRRDLLIRHAQKIHSGNL 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 82.2 bits (204), Expect = 5e-20
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           C  + +  + L+ H R H  ++P++C +  C +   +   L++H +K  GD     
Sbjct: 15  CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            + +   P +C    C +  +    L  H R H  DRPF+C 
Sbjct: 2   SSGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCN 41

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 83.3 bits (207), Expect = 7e-20
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK---HTGDRPFQCK 302
           C K +    +LK H R HTGEKP++C    CG  + R + L  H  +   +  ++ F C 
Sbjct: 13  CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCS 70

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.6 bits (200), Expect = 8e-19
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 246 CGKTYTKSSHLKAHLR---THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CGK Y +  +L  H      +  E+ + C    C   F R  EL  H   HTG+ P++C 
Sbjct: 41  CGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKCS 98

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 73.3 bits (181), Expect = 3e-16
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH-FRKHTG 295
           C +T+ +   L+ H+ +HTGE PY+C    C  +F +  +L  H  + H+G
Sbjct: 72  CQETFRRRMELRLHMVSHTGEMPYKC--SSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.0 bits (149), Expect = 7e-12
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            +G    +C    C  KF     L  H RKHTG++PF+C 
Sbjct: 2   SSGSSGVEC--PTCHKKFLSKYYLKVHNRKHTGEKPFECP 39

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 5/23 (21%), Positives = 13/23 (56%), Gaps = 1/23 (4%)

Query: 246 CGKTYTKSSHLKAH-LRTHTGEK 267
           C + + +   L++H ++ H+G  
Sbjct: 100 CSQQFMQKKDLQSHMIKLHSGPS 122

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 81.8 bits (203), Expect = 8e-20
 Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 14/79 (17%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGE----KPYQCKWKGCGWKFARS 283
             S    H G        C KT+ +   L  H + +         + C    CG  F R 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTFTRR 60

Query: 284 DELTRHFRKHTGDRPFQCK 302
           + + RH     G    + +
Sbjct: 61  NTMARHADNCAGPDGVEGE 79

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 255 HLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG----DRPFQCK 302
              +  RTHTGEKPY C    C   F +   L  HF+++         F C 
Sbjct: 2   SSGSSGRTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS 51

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 2/32 (6%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCG 277
           CGKT+T+ + +  H     G    +   +  G
Sbjct: 53  CGKTFTRRNTMARHADNCAGPDGVEG--ENSG 82

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.9 bits (201), Expect = 2e-19
 Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 10/77 (12%)

Query: 231 GSRKKLTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFAR 282
           GS                     CGK+++ SS L  H RTHTGEKPY+C    CG  F +
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQ 58

Query: 283 SDELTRHFRKHTGDRPF 299
              L  H R HTG  P 
Sbjct: 59  RSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 74.0 bits (183), Expect = 5e-17
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 252 KSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            S             + Y+C    CG  F+ S +L++H R HTG++P++C 
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCD 50

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 80.2 bits (199), Expect = 3e-19
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 10/72 (13%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
              H+             C  ++    +L +H   HTGEKPY+C    CG +F R   L 
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLK 62

Query: 288 RHFRKHTGDRPF 299
            H R H+G++P+
Sbjct: 63  THTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 74.4 bits (184), Expect = 3e-17
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 253 SSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
             H   H      +KPY+C    C   F     L  H   HTG++P++C 
Sbjct: 2   GHHHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCN 49

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.2 bits (199), Expect = 3e-19
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 10/72 (13%)

Query: 236 LTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELT 287
            +  +  H G        CGK +++SS L  H R HTGEKPY+C    CG  F+++  L 
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLI 59

Query: 288 RHFRKHTGDRPF 299
            H R HT     
Sbjct: 60  NHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 69.4 bits (171), Expect = 2e-15
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 256 LKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
                  H+GEKPY C    CG  F+RS  L +H R HTG++P++C 
Sbjct: 2   SSGSSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCL 46

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.3 bits (194), Expect = 1e-18
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 246 CGKTYTKSSHLKAHLRTHTGE--KPYQCKWKGCGWKFARSDELTRHFRK-HTGDRPF 299
           C   +T+S  +K H+     E    + C    C    AR  +L  H RK H+   P 
Sbjct: 21  CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 74.1 bits (183), Expect = 5e-17
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 255 HLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG--DRPFQCK 302
              +  RTH+GEKPY+C    C  +F +S  +  H  +        F C 
Sbjct: 2   SSGSSGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCP 49

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 74.6 bits (184), Expect = 1e-17
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           +P+ C W  CG +F RSDEL RH R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEK 267
             C    CGK +T+S  L+ H RTHTGEK
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 74.9 bits (185), Expect = 2e-17
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 246 CGKTYTKSSHLKAHLRT--HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           C + YT  S+   H  T      K Y C +  C  +F R D +T H +    
Sbjct: 16  CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 4/44 (9%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFR--KHTGDRPFQCK 302
            T  GE  Y+C  K C   +       RH+        + + C 
Sbjct: 3   FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPCP 44

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 73.2 bits (180), Expect = 4e-17
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 232 SRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEK 267
            +KK   H C   GCGK Y K+SHL+AHLR HTGE+
Sbjct: 4   GKKK--QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 72.3 bits (177), Expect = 4e-16
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 237 TSHACFHPGCGKTYTKSSHLKAHL-RTHTGEKP---YQCKWKGC---GWKFARSDELTRH 289
              +     C +T++    L  H+   H G      + C W+ C   G  F    +L  H
Sbjct: 22  AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81

Query: 290 FRKHTGDRPFQC 301
            R HTG++    
Sbjct: 82  IRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 56.5 bits (136), Expect = 2e-10
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 233 RKKLTSHACFHPGC---GKTYTKSSHLKAHLRTHTGEKPYQC 271
             +  +H C+   C   GK++     L  H+R HTGEK    
Sbjct: 52  GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 8/41 (19%), Positives = 10/41 (24%), Gaps = 3/41 (7%)

Query: 262 THTGEKPYQCKWKGCGWKFARSDELTRHFRK-HTGDRPFQC 301
               +     K   C   F+   EL  H    H G      
Sbjct: 19  IDEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNN 57

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 66.8 bits (164), Expect = 8e-15
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           +   + TGEKPY CK   CG  F  +  L +H R H+G++P    
Sbjct: 2   SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           CGK++  +S L  H R H+GEKP    
Sbjct: 18  CGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 8e-15
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEK Y C  K CG  F+R+  L +H R H+G++P   
Sbjct: 2   SSGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK+++++  L  H R H+GEKP   
Sbjct: 18  CGKSFSRAPCLLKHERLHSGEKPSGP 43

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 67.8 bits (166), Expect = 9e-15
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 246 CGKTYTKSSHLKAHLRTHT---GEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           CG T  + + L  H R H        + C++  CG +F + D +  H  K         +
Sbjct: 13  CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 5/42 (11%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHT---GDRPFQC 301
            +G    QC+   CG+   +   L  H RKH        F C
Sbjct: 2   SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPC 41

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GE+PY C    CG  F R   L  H ++H  ++    
Sbjct: 3   SGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        CGK + + SHL  HL+ H  EK    
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
              + TG++PY+C    CG  F     L  H R HTG++P    
Sbjct: 3   SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           CGK +   S L  H R+HTGEKP    
Sbjct: 18  CGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C  + CG  F  S  L +H   H+G+RP   
Sbjct: 3   SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +  SSHL  H   H+GE+P   
Sbjct: 18  CGKAFRVSSHLVQHHSVHSGERPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP+QC  K CG  F+ S  L +H R H    P   
Sbjct: 2   SSGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        CG  ++ S  L  HLR+H    P   
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GEKPY+C    CG  F R   L  H R HTG RP   
Sbjct: 3   SGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + + +HL  H R HTG +P   
Sbjct: 18  CGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 3e-14
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F  +   T+H R HTG RP   
Sbjct: 2   SSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +  +S    H R HTG++P   
Sbjct: 18  CGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-14
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           +   + TGEKPY+C  K C   F +   L +H + HTG++P    
Sbjct: 2   SSGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           C K +T+ +HL  H +THTGEKP    
Sbjct: 18  CSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-14
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GEKPY C    CG  F  S EL RH R HTG++P   
Sbjct: 3   SGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +  S+ L  H R HTGEKP   
Sbjct: 18  CGKAFGLSAELVRHQRIHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C  K CG  F+++  L +H R HTG++P   
Sbjct: 3   SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +++++HL  H R HTGEKP   
Sbjct: 18  CGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGE PY+C    CG  F+R  +L  H R H G++P   
Sbjct: 3   SGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +++   L +H RTH GEKP   
Sbjct: 18  CGKAFSRKYQLISHQRTHAGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGE+ Y+C    CG  FAR   L  H R HTG++P   
Sbjct: 3   SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + + S L  H R HTGEKP   
Sbjct: 18  CGKAFARKSTLIMHQRIHTGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 64.8 bits (159), Expect = 4e-14
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG KPY C    CG  F     L  H R HTG+     
Sbjct: 2   SSGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.7 bits (138), Expect = 4e-11
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +   S+L  H RTHTGE     
Sbjct: 18  CGKAFRSKSYLIIHTRTHTGESGPSS 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C    C   F+    LT+H R H+G++P   
Sbjct: 3   SGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C K ++  + L  H R H+GEKP   
Sbjct: 18  CRKAFSHHASLTQHQRVHSGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP+ C    CG  F+    L +H R HTG++P   
Sbjct: 2   SSGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++    L  H R HTGEKP   
Sbjct: 18  CGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C    CG  F+    L+ H R H+G +P   
Sbjct: 3   SGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++    L  H R H+G+KP   
Sbjct: 18  CGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   +  GEKPY C    CG  F+    L  H R H+G++P   
Sbjct: 2   SSGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++  S+L  H+RTH+GEKP   
Sbjct: 18  CGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKP++C    CG  F+ S +L  H R HTG++P   
Sbjct: 3   SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK+++ SS L  H R HTGEKP   
Sbjct: 18  CGKSFSISSQLATHQRIHTGEKPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
              + TGEKPY C    CG  F  S  L +H R HT +      
Sbjct: 3   SGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           CGK +  S+HL  HLR HT E      
Sbjct: 18  CGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F +  +L  H R HTG+ P   
Sbjct: 2   SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK++ K S L  H R HTGE P   
Sbjct: 18  CGKSFIKKSQLHVHQRIHTGENPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + +GEKPY+C    CG  + R  +L  H R HTG++    
Sbjct: 2   SSGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK Y +   L  H R HTGEK    
Sbjct: 18  CGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY C    CG  F +   L RH R HTG++P   
Sbjct: 2   SSGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK++ + SHL  H R HTGEKP   
Sbjct: 18  CGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 7e-14
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGE+P++C    CG  F +S  L +H R HTG++P   
Sbjct: 3   SGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK++ +S+HL  H R HTGEKP   
Sbjct: 18  CGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 7e-14
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG KPYQC    CG  F+++ +L RH R HTG++P   
Sbjct: 2   SSGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++++S L  H R HTGEKP   
Sbjct: 18  CGKAFSQTSKLARHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 7e-14
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKP++C    CG  + +   LT+H R HTG++P   
Sbjct: 3   SGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK+Y +  HL  H R HTGEKP   
Sbjct: 18  CGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 7e-14
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + +GEKP++C  K CG  F ++  L  H R HTG++P   
Sbjct: 2   SSGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + ++ HL +HLR HTGEKP   
Sbjct: 18  CGKAFRQNIHLASHLRIHTGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 7e-14
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY C    CG  F     L +H + HT  +P   
Sbjct: 2   SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T  S+L  H + HT +KP   
Sbjct: 18  CGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 7e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP++C    CG  F     L RH   HT ++P   
Sbjct: 2   SSGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK++   S L  H   HT EKP   
Sbjct: 18  CGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.1 bits (157), Expect = 7e-14
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + +GEKP++C  + CG  F  + +   H R H+G++P   
Sbjct: 2   SSGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCG 277
           CGK +  +S   +H R+H+GEKP        G
Sbjct: 18  CGKGFYTNSQCYSHQRSHSGEKPSGPS---SG 46

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 7e-14
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F R+  L RH   HTG++P   
Sbjct: 2   SSGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + ++SHL  H   HTGEKP   
Sbjct: 18  CGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 64.0 bits (157), Expect = 8e-14
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    C   F     L  H R HTG+     
Sbjct: 2   SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C K +   S+L  H RTHTGE     
Sbjct: 18  CQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           +   + +G+KPY+CK   C   F +   L +H R HTG+R     
Sbjct: 2   SSGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           C KT+ +  HL  H R HTGE+     
Sbjct: 18  CRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEK Y+C    CG  F+R+ +L++H + HTG++P   
Sbjct: 3   SGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++++S L  H + HTGEKP   
Sbjct: 18  CGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
              + TGEKPY+C    CG  F +  +L  H + HTG++P    
Sbjct: 3   SGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           CGK++TK S L  H + HTGEKP    
Sbjct: 18  CGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C  + CG  F    +L  H   HTG++P   
Sbjct: 2   SSGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/26 (42%), Positives = 12/26 (46%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +     L  H   HTGEKP   
Sbjct: 18  CGKGFICRRDLYTHHMVHTGEKPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK-HTGDRPFQC 301
           +   + TG+KPY+C    CG  F ++  L RH+R  HTG++P   
Sbjct: 2   SSGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 246 CGKTYTKSSHLKAHLR-THTGEKPYQC 271
           CGK + +++ L  H R  HTGEKP   
Sbjct: 18  CGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG+KP++C    CG  F     L  H R HTG++    
Sbjct: 2   SSGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK++    +L  H R HTGEK    
Sbjct: 18  CGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.0 bits (157), Expect = 9e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP++C    C   F     L  H R HTG++P   
Sbjct: 2   SSGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C K +   S+L  H RTHTGEKP   
Sbjct: 18  CQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKP++C  + CG  F+ + +L  H R HTG+ P   
Sbjct: 3   SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK+++ +S L  H R HTGE P   
Sbjct: 18  CGKSFSFNSQLIVHQRIHTGENPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG+KPY+C    CG  F ++  L RH   HTG++P   
Sbjct: 2   SSGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL  H   HTGEKP   
Sbjct: 18  CGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C    CG  F R   L  H + HTG+R    
Sbjct: 3   SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T+ S L  H ++HTGE+    
Sbjct: 18  CGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F ++  L RH   HTG++P   
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL  H   HTGEKP   
Sbjct: 18  CGKVFTQNSHLARHRGIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG K ++C    CG  F R   L+ H + HTG++P   
Sbjct: 2   SSGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T+ S L  H + HTGEKP   
Sbjct: 18  CGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GEKP+QC  + CG +F ++  L  H R HTG++P   
Sbjct: 3   SGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL +H R HTGEKP   
Sbjct: 18  CGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
              + TGEKPY+C    CG  F+    LT H   HTG +P    
Sbjct: 3   SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCK 272
           CGK ++  S L  H   HTG+KP    
Sbjct: 18  CGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP++C    CG  F+R   L  H + HTG++P   
Sbjct: 2   SSGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +++ S L  H + HTGEKP   
Sbjct: 18  CGKGFSRRSALNVHHKLHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGE+ Y+C    CG  F +   L+ H R H G++P   
Sbjct: 3   SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + + S L  H R H GEKP   
Sbjct: 18  CGKAFIQKSTLSMHQRIHRGEKPSGP 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 64.0 bits (155), Expect = 1e-13
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           CG    K S LK H+RTHT  +PY C    C + F     LT+H +     +
Sbjct: 7   CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.6 bits (84), Expect = 7e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 269 YQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           Y C+   CG +  +   L +H R HT  RP+ C 
Sbjct: 2   YICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCT 33

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F ++  L RH R HTG +P   
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL  H R HTG KP   
Sbjct: 18  CGKVFTQNSHLARHRRVHTGGKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F ++  L RH   HTG++P   
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL  H   HTGEKP   
Sbjct: 18  CGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY C  + CG  F    +L  H R HTG++P   
Sbjct: 2   SSGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +   S L+ H R HTGEKP   
Sbjct: 18  CGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    C   F     LT H R HTG++P   
Sbjct: 2   SSGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C K++   S L  H R HTGEKP   
Sbjct: 18  CHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C    CG  F+++ +L RH R HTG++P   
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++++S L  H R HTGEKP   
Sbjct: 18  CGKAFSQTSKLARHQRIHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG KPY C    C   F+   +L  H R HTG +P   
Sbjct: 2   SSGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C KT++  S L  H R+HTG KP   
Sbjct: 18  CAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C  + CG  +     L  H + HTG+RP   
Sbjct: 2   SSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK Y    +L  H + HTGE+P   
Sbjct: 18  CGKGYNSKFNLDMHQKVHTGERPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + +GEKPY C    CG  F++   L+ H R HTG++P   
Sbjct: 2   SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 16/26 (61%), Positives = 19/26 (73%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGKT+++ S L AH RTHTGEKP   
Sbjct: 18  CGKTFSQKSILSAHQRTHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  FA+   LT+H R HTG++P   
Sbjct: 2   SSGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + + ++L  H R HTGEKP   
Sbjct: 18  CGKAFAQKANLTQHQRIHTGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGE P+ C    CG  F     L  H + HTG+RP   
Sbjct: 2   SSGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T  ++L  H + HTGE+P   
Sbjct: 18  CGKVFTHKTNLIIHQKIHTGERPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              +  GEK Y+C    CG +F++S  L  H R HTG++P   
Sbjct: 3   SGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +++SSHL+ H R HTGEKP   
Sbjct: 18  CGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + + EKPY+C  + CG  + R   L  H R H G++    
Sbjct: 2   SSGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK Y +  +L  H R H GEK    
Sbjct: 18  CGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C    CG  F     L  H   H+G++P   
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +   S L  H  TH+GEKP   
Sbjct: 18  CGKAFRARSSLAIHQATHSGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + +GEKPY+C    CG  F ++  LT H+R HTG++P   
Sbjct: 2   SSGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL  H R HTGEKP   
Sbjct: 18  CGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + +GEKPY+C    CG  F     L  H R H G      
Sbjct: 2   SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +   S L  H RTH G      
Sbjct: 18  CGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + TGEKPY+C    CG  F  +  L+RH R HTG++P   
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +  +S+L  H R HTGEKP   
Sbjct: 18  CGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F     LT H   HTG++P   
Sbjct: 2   SSGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-10
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +   S+L  H   HTGEKP   
Sbjct: 18  CGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F     L  H + HTG+R    
Sbjct: 2   SSGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK++T  S L+ H + HTGE+    
Sbjct: 18  CGKSFTWKSRLRIHQKCHTGERHSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              +GE PY+C    CG  F R D+L  H R H G+     
Sbjct: 3   SGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + +   L +H RTH GE     
Sbjct: 16  CGKAFNRKDQLISHQRTHAGESGPSS 41

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   +  GEKPYQC    CG  F+ S  LT+H+  HT ++P   
Sbjct: 2   SSGSSGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        CGK+++ S  L  H  THT EKP   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TG KPY C    CG  F+    LT H   HTG++P   
Sbjct: 2   SSGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK ++  S L  H   HTGEKP   
Sbjct: 18  CGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F ++  L  H R HTG +P   
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++SHL  H R HTG KP   
Sbjct: 18  CGKVFTQNSHLANHQRIHTGVKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGE+PY C    CG  F     L +H + HTG++P   
Sbjct: 2   SSGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T  S+L  H + HTGEKP   
Sbjct: 18  CGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.1 bits (152), Expect = 4e-13
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGE PY+C    CG  F+R D+L  H + H+G      
Sbjct: 2   SSGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 9e-10
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        CGK +++   L +H +TH+G+     
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 4e-13
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKPY+C    CG  F     L  H + HTG++P   
Sbjct: 2   SSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T  S+L  H + HTGEKP   
Sbjct: 18  CGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF 299
               +  GEKPY+C    CG  F++   L  H R HTG  P 
Sbjct: 1   GSSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPY 269
           CGK +++   L  H+R HTG  P 
Sbjct: 17  CGKAFSQKGSLIVHIRVHTGSGPS 40

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GEKP++C  + CG +F ++ +L  H R HTG++P   
Sbjct: 3   SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T++S L +H R HTGEKP   
Sbjct: 18  CGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 8e-13
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   +  G+K ++C    C   F +S  LT H R HTG++P   
Sbjct: 2   SSGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 15/26 (57%), Positives = 17/26 (65%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C KT+T+SS L  H R HTGEKP   
Sbjct: 18  CKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   + TGEKP +C    CG  F    +L  H R H  D+    
Sbjct: 2   SSGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +   S L  H RTH  +K    
Sbjct: 18  CGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 61.1 bits (149), Expect = 1e-12
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK-HTGDRPFQCK 302
           +   + +  KPY C  + CG  F+R D L  H ++ HT +RP +C+
Sbjct: 2   SSGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 45

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 246 CGKTYTKSSHLKAHL-RTHTGEKPYQCKWKGCGWKFA 281
           CGK +++  HL  H+ + HT E+P++C  +      +
Sbjct: 18  CGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPS 52

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF 299
               +  GEKPY C  + CG +F     L  H R HTG  P 
Sbjct: 1   GSSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPY 269
           CG  +     LK+HLR HTG  P 
Sbjct: 17  CGTRFRHLQTLKSHLRIHTGSGPS 40

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GE+P++C    CG  F R   L  H R H+ ++    
Sbjct: 3   SGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        CGK + + SHL  HLR H+ EK    
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF 299
              +  GEKPY+C  + CG +F +   L  H   HTG  P 
Sbjct: 2   SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPY 269
           CG  + + +HL+AH+  HTG  P 
Sbjct: 17  CGARFVQVAHLRAHVLIHTGSGPS 40

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   +  GEK ++C  + C   F+++  L  H   H G++P   
Sbjct: 2   SSGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        C   ++++S L+ H   H GEKP   
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              +  GE+ ++C    CG  F ++    +H R HTG++P   
Sbjct: 3   SGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK + ++S+   H R HTGEKP   
Sbjct: 18  CGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + T  K Y C    CG  F R   LTRH + HT       
Sbjct: 3   SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.1 bits (105), Expect = 8e-07
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           CGK +T+  HL  H + HT +     
Sbjct: 18  CGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
           +   +  G  PY+C    C   F+    L  H R HT ++P   
Sbjct: 2   SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        C K+++    L  H R HT EKP   
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 58.1 bits (141), Expect = 9e-12
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
             R  TG KP+QC    C   F+RSD L  H ++H
Sbjct: 2   STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRH 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +  K +QC    CG  F     L +H R HTG++P   
Sbjct: 3   SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S               CG+ +T  SHL  H R HTGEKP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              +GEKP+ C    C   F+    L  H + H  ++P   
Sbjct: 3   SGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C K ++  S+L  H +TH  EKP   
Sbjct: 16  CEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF 299
              +G++ Y+C+   CG  F +   LT H R HTG  P 
Sbjct: 3   SGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPY 269
           CGK++ +   L  H R HTG  P 
Sbjct: 16  CGKSFRQKGSLTLHERIHTGSGPS 39

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              + +GEK + C    CG  F     L  H R H G++    
Sbjct: 3   SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 8/42 (19%)

Query: 238 SHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           S      G        CGK +   S L+ H R H GEK    
Sbjct: 2   SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 53.4 bits (128), Expect = 6e-10
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 10/52 (19%)

Query: 220 PSKTKTRERRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQC 271
            S +  R R+          AC    CGK +    HL  H  +H+GEKPY  
Sbjct: 2   SSGSSGRTRKQ--------VACEI--CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 48.4 bits (115), Expect = 3e-08
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP 303
            +    K   C+   CG  F     L RH   H+G++P+   P
Sbjct: 5   SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGP 45

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 55.2 bits (132), Expect = 7e-10
 Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 251 TKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFR--KHTGDRPFQCKPN 304
           +  S  K +    TG   ++CK   C   +    ELT H     H  D   +   N
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN 55

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 10/60 (16%), Positives = 16/60 (26%), Gaps = 3/60 (5%)

Query: 246 CGKTYTKSSHLKAHLRT--HTGEKPYQC-KWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           C   Y     L  H+    H  +  ++        W   R   L     K    +  +C 
Sbjct: 25  CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM 84

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.2 bits (88), Expect = 6e-04
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 4/57 (7%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK--HTGDRPFQ 300
              +  +   L         +K  +C +  CG  F    +L+ H  K  H       
Sbjct: 58  KRWSKPRKRSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC 301
              +GEKPY C    C   F+ ++ L +H + HT       
Sbjct: 3   SGSSGEKPYSC--AECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.9 bits (104), Expect = 1e-06
 Identities = 6/26 (23%), Positives = 13/26 (50%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQC 271
           C +T++ ++ L  H + HT +     
Sbjct: 16  CKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF 299
               +  GE PY C    CG  F +   L  H R  +   P 
Sbjct: 1   GSSGSSGGETPYLC--GQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPY 269
           CGK++T+   L  H R+ +   P 
Sbjct: 17  CGKSFTQRGSLAVHQRSCSQSGPS 40

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 45.4 bits (107), Expect = 3e-07
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHT 294
           ++PY C   GC   F R+ +L RH + H 
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 45.6 bits (108), Expect = 3e-07
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP 298
           +   +  GE P++C    C   F + + L +H R H     
Sbjct: 2   SSGSSGAGENPFKC--SKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (86), Expect = 3e-04
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKP 268
           C + +T+ ++L  H RTH  +  
Sbjct: 18  CDRVFTQRNYLVQHERTHARKSG 40

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 13/77 (16%), Positives = 21/77 (27%), Gaps = 17/77 (22%)

Query: 231 GSRKKLTSHACFHPG--------CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFAR 282
           GS          H G        CG  + + S       T +  K   C+   C     +
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRS-------TLSRRKTPMCE--KCRKDSCQ 51

Query: 283 SDELTRHFRKHTGDRPF 299
              L +     +G +  
Sbjct: 52  EAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 9/51 (17%)

Query: 252 KSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
            S       + H G++  +C    CG  F R   L+R        +   C+
Sbjct: 2   SSGSSGKRQKIHLGDRSQKC--SKCGIIFIRRSTLSRR-------KTPMCE 43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 2/42 (4%)

Query: 228 RRSGSRKKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPY 269
            R  +  +  +  C    C K   + + L       +G+K  
Sbjct: 29  IRRSTLSRRKTPMC--EKCRKDSCQEAALNKDEGNESGKKTS 68

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)

Query: 244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           P C   ++ S  LK H+R    E    C    C  +F  +D    H  K 
Sbjct: 78  PLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKK 123

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 42.5 bits (100), Expect = 4e-06
 Identities = 9/27 (33%), Positives = 19/27 (70%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGEK 267
           C  PGC KT+ +  ++++H++TH  ++
Sbjct: 21  CLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 259 HLRTHTGEKP---YQCKWKGCGWKFARSDELTRHFRKHTGDR 297
            +  +  E P   ++C + GC   F R   +  H + H  DR
Sbjct: 6   SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 41.1 bits (97), Expect = 8e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEK 267
             C    C + + +  HLK H R+HT EK
Sbjct: 3   FVC--EVCTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           + + C+   C   FAR + L RH+R HT ++
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 38.0 bits (87), Expect = 2e-04
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
            +GEKPY C    CG +F R D ++ H R H G
Sbjct: 5   SSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDG 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	371
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.79
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.76
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.74
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.73
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.73
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.72
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.71
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.68
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.68
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.67
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.65
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.61
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.6
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.58
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.55
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.54
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.51
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.46
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.42
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.42
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.42
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.4
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.39
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.38
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.36
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.36
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.35
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.35
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.35
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.34
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.31
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.29
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.27
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.26
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.25
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.25
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.2
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.2
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.17
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.15
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.03
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.03
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.01
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.0
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.99
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.98
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.98
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.98
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.97
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.95
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.94
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.93
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.92
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.88
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.87
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.87
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.83
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.78
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.76
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.75
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.74
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.73
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.73
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.72
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.72
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.71
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.71
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.71
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.7
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.69
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.69
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.68
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.67
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.67
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.67
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.67
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.66
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.65
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.65
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.65
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.65
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.65
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.63
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.62
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.61
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.6
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.6
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.58
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.58
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.58
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.57
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.56
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.55
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.52
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.51
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.49
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.45
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.45
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.45
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.44
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.44
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.4
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.37
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.37
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.35
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.33
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.31
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.3
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.25
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.23
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.23
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.21
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.16
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.1
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.09
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.07
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.99
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.96
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.95
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.89
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.88
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.87
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.86
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.85
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.83
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.83
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.82
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.81
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.81
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.77
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.77
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.76
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.75
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.75
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.74
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.74
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.73
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.73
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.73
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.89
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.7
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.7
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.67
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.84
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.66
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.64
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.8
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.61
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.76
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.59
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.72
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.56
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.51
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.5
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.49
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.47
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.41
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.21
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.23
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.41
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	92.83
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	92.73
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.36
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.01
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	85.71

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.79  E-value=3.3e-19  Score=153.26  Aligned_cols=114  Identities=32%  Similarity=0.610  Sum_probs=103.1

Q ss_pred             CCCCCCCcCCCCCCCchhhcccccc-----------------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcc
Q psy16849        218 NTPSKTKTRERRSGSRKKLTSHACF-----------------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKF  280 (371)
Q Consensus       218 ~~p~~c~~c~~~~~~~~~l~~H~c~-----------------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F  280 (371)
                      ...+.|..|++.|.....|..|+..                 |..|++.|.....|..|+++|+++++|.|.+++|++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            4579999999999999999888643                 45589999999999999999999999999655699999


Q ss_pred             cChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        281 ARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       281 ~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      .....|.+|+++|+++++|+|.+.+|+++|.+...|.+|++.|+++..+.+
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            999999999999999999999976699999999999999999998876554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=3.4e-19  Score=152.70  Aligned_cols=115  Identities=26%  Similarity=0.496  Sum_probs=100.0

Q ss_pred             CCCCCCcCCCCCCCchhhccccc---cc-------------CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccC
Q psy16849        219 TPSKTKTRERRSGSRKKLTSHAC---FH-------------PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFAR  282 (371)
Q Consensus       219 ~p~~c~~c~~~~~~~~~l~~H~c---~h-------------~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~  282 (371)
                      .++.|..|++.|.+...|..|+.   .+             ..|++.|.....|..|+++|.++++|.|.++.|++.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            46899999999999999998864   22             224699999999999999999999999975569999999


Q ss_pred             hhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhc-cCCCCCCCCCCCc
Q psy16849        283 SDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATA-KCPSADTSQPFKT  333 (371)
Q Consensus       283 ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~-k~h~~~c~~~fk~  333 (371)
                      ...|..|+++|.++++|+|.+++|+++|.+...|.+|+ +.|.++..+.|..
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            99999999999999999999888999999999999999 7887654444443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=4.9e-19  Score=146.43  Aligned_cols=110  Identities=31%  Similarity=0.562  Sum_probs=90.9

Q ss_pred             CCCCCC--cCCCCCCCchhhccccccc-------CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHH
Q psy16849        219 TPSKTK--TRERRSGSRKKLTSHACFH-------PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH  289 (371)
Q Consensus       219 ~p~~c~--~c~~~~~~~~~l~~H~c~h-------~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H  289 (371)
                      .++.|.  .|++.|.....|..|+..+       ..|++.|.....|..|+++|.++++|.|.++.|++.|.....|.+|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            467887  8999999998888886543       3499999999999999999999999999655699999999999999


Q ss_pred             hhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        290 FRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       290 ~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      +++|.++++|+|.+.+|+++|.+...|.+|++.|++++.
T Consensus        84 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           84 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            999999999999644499999999999999999886643

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.74  E-value=2.9e-18  Score=152.41  Aligned_cols=121  Identities=26%  Similarity=0.402  Sum_probs=71.4

Q ss_pred             CCCC--CcCCCCCCCchhhccccccc--------C--CCCCcccCchhHHHHH-hhh-cCCCcccc--ccCCCCCcccCh
Q psy16849        220 PSKT--KTRERRSGSRKKLTSHACFH--------P--GCGKTYTKSSHLKAHL-RTH-TGEKPYQC--KWKGCGWKFARS  283 (371)
Q Consensus       220 p~~c--~~c~~~~~~~~~l~~H~c~h--------~--~Cgk~F~~~s~L~~H~-r~H-tgeKpf~C--~~~~CgK~F~~k  283 (371)
                      ++.|  ..|++.|.....|..|+..+        .  .|++.|.....|..|+ +.| .++++|.|  ..  |++.|...
T Consensus        42 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~--C~k~f~~~  119 (190)
T 1tf6_A           42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFEN--CGKAFKKH  119 (190)
T ss_dssp             SSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSS--SCEECSSH
T ss_pred             CccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCC--CccccCCH
Confidence            4556  55666666666665554332        2  3666666666666666 455 34556666  44  66666666


Q ss_pred             hHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC----C---CCCCCCcccccccccc
Q psy16849        284 DELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA----D---TSQPFKTWATVVSTYN  342 (371)
Q Consensus       284 s~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~----~---c~~~fk~~~~l~~h~~  342 (371)
                      ..|..|+++|++++||+|.+.+|+++|.+...|++|++.|++    .   |++.|.....|..|.+
T Consensus       120 ~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~l~~H~~  185 (190)
T 1tf6_A          120 NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA  185 (190)
T ss_dssp             HHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccHHHHHHHHH
Confidence            666666666666666666544466666666666666666653    2   5555555555555544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.73  E-value=1.6e-18  Score=141.84  Aligned_cols=102  Identities=33%  Similarity=0.600  Sum_probs=86.6

Q ss_pred             CCCCCCCc--CCCCCCCchhhcccccc--------cC--CCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhH
Q psy16849        218 NTPSKTKT--RERRSGSRKKLTSHACF--------HP--GCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE  285 (371)
Q Consensus       218 ~~p~~c~~--c~~~~~~~~~l~~H~c~--------h~--~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~  285 (371)
                      ..++.|..  |++.|.....|..|+..        +.  .|++.|.....|..|+++|.++++|.|.+  |++.|.....
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~   81 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDH   81 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHHH
Confidence            45788886  99999988888877533        23  58999999999999999999999999966  9999999999


Q ss_pred             HHHHhhhhcCCCCccC--CCCCCCCCCCCcHHHHhhccCC
Q psy16849        286 LTRHFRKHTGDRPFQC--KPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       286 L~~H~r~HtgeKPykC--~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      |.+|+++|+++++|+|  .+  |+++|.+...|.+|++.|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPS--CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTT--CCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCC--CccccCCHHHHHHHHhcC
Confidence            9999999999999999  66  999999999999998876

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.73  E-value=4.9e-19  Score=157.40  Aligned_cols=112  Identities=32%  Similarity=0.630  Sum_probs=79.3

Q ss_pred             CCCCCCcCCCCCCCchhhcccccc--------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh
Q psy16849        219 TPSKTKTRERRSGSRKKLTSHACF--------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF  290 (371)
Q Consensus       219 ~p~~c~~c~~~~~~~~~l~~H~c~--------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~  290 (371)
                      .++.|..|++.|.....|..|+..        |..|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+
T Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHH
T ss_pred             CCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHH
Confidence            356777777777777777666532        3347777777777777777777777777755  777777777777777


Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCcc
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTW  334 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~  334 (371)
                      ++|.++++|+|.+  |+++|.+...|.+|++.|+++..+.|..|
T Consensus       126 ~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  167 (190)
T 2i13_A          126 RTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPYKCPEC  167 (190)
T ss_dssp             HHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             HHhCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCCCeECCCC
Confidence            7777777777777  77777777777777777765433333333

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.72  E-value=1.7e-18  Score=153.83  Aligned_cols=106  Identities=36%  Similarity=0.709  Sum_probs=95.2

Q ss_pred             CCCCCCcCCCCCCCchhhcccccc--------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh
Q psy16849        219 TPSKTKTRERRSGSRKKLTSHACF--------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF  290 (371)
Q Consensus       219 ~p~~c~~c~~~~~~~~~l~~H~c~--------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~  290 (371)
                      .++.|..|++.|.....|..|+..        |..|++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+
T Consensus        76 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~  153 (190)
T 2i13_A           76 KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQ  153 (190)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHH
T ss_pred             CCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CCcccCCHHHHHHHH
Confidence            478999999999999999988643        4559999999999999999999999999976  999999999999999


Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      ++|+++++|+|.+  |+++|.+...|++|++.|+++..
T Consensus       154 ~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          154 RTHTGEKPYKCPE--CGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHHHCCCCEECTT--TCCEESSHHHHHHHHTTC-----
T ss_pred             HhcCCCCCeECCC--CCCccCCHHHHHHHHHhcCCCCC
Confidence            9999999999999  99999999999999999997653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.8e-18  Score=138.47  Aligned_cols=104  Identities=27%  Similarity=0.459  Sum_probs=92.8

Q ss_pred             CCCCCCCcCCCCCCCchhhccccccc--------CCCCCcccCchhHHHHHhh---hcCCCccccccCCCCCcccChhHH
Q psy16849        218 NTPSKTKTRERRSGSRKKLTSHACFH--------PGCGKTYTKSSHLKAHLRT---HTGEKPYQCKWKGCGWKFARSDEL  286 (371)
Q Consensus       218 ~~p~~c~~c~~~~~~~~~l~~H~c~h--------~~Cgk~F~~~s~L~~H~r~---HtgeKpf~C~~~~CgK~F~~ks~L  286 (371)
                      ..++.|..|++.|.....|..|+..+        ..|++.|.....|..|++.   |.++++|.|.+  |++.|.....|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l   82 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRMEL   82 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCHHHH
Confidence            45799999999999999998886543        4499999999999999985   67899999976  99999999999


Q ss_pred             HHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        287 TRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       287 ~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      ..|+++|.+++||+|.+  |++.|.++..|++|++.+|.
T Consensus        83 ~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHSSSCSEECSS--SCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHHcCCCCCccCCC--ccchhCCHHHHHHHHHHHCC
Confidence            99999999999999999  99999999999999985443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.71  E-value=4e-18  Score=145.85  Aligned_cols=81  Identities=26%  Similarity=0.483  Sum_probs=76.8

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |..||+.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|+|++||.|.+  |+++|.+...|.+|++.
T Consensus        25 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           25 CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             ETTTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCC--CCCCcCCHHHHHHHhHH
Confidence            4559999999999999999999999999966  9999999999999999999999999999  99999999999999999


Q ss_pred             CCCCC
Q psy16849        323 PSADT  327 (371)
Q Consensus       323 h~~~c  327 (371)
                      |+++.
T Consensus       101 hh~~~  105 (133)
T 2lt7_A          101 VHSQD  105 (133)
T ss_dssp             HTCCC
T ss_pred             hcCCC
Confidence            98653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=2.4e-17  Score=130.94  Aligned_cols=87  Identities=63%  Similarity=1.126  Sum_probs=80.8

Q ss_pred             hcccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHH
Q psy16849        236 LTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKD  315 (371)
Q Consensus       236 l~~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~  315 (371)
                      .+.+.|.++.|++.|.....|..|++.|.++++|.|.++.|++.|.....|.+|+++|+++++|+|.+  |++.|.+...
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~   90 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSDH   90 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCHHH
Confidence            34567777789999999999999999999999999965469999999999999999999999999999  9999999999


Q ss_pred             HHhhccCCC
Q psy16849        316 LAATAKCPS  324 (371)
Q Consensus       316 L~~H~k~h~  324 (371)
                      |.+|++.|.
T Consensus        91 l~~H~~~H~   99 (100)
T 2ebt_A           91 LALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999886

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.68  E-value=2.3e-17  Score=128.59  Aligned_cols=86  Identities=35%  Similarity=0.718  Sum_probs=78.8

Q ss_pred             ccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHH
Q psy16849        238 SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLA  317 (371)
Q Consensus       238 ~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~  317 (371)
                      .+.|.+..|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|.++++|+|.+  |++.|.+...|.
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~   79 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERK   79 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHH
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHHHHH
Confidence            355655579999999999999999999999999966  9999999999999999999999999999  999999999999


Q ss_pred             hhccCCCCCC
Q psy16849        318 ATAKCPSADT  327 (371)
Q Consensus       318 ~H~k~h~~~c  327 (371)
                      +|++.|+++.
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999998654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.68  E-value=2.5e-17  Score=146.33  Aligned_cols=125  Identities=23%  Similarity=0.387  Sum_probs=106.3

Q ss_pred             CCCCCC--CcCCCCCCCchhhccccc--------cc--CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhH
Q psy16849        218 NTPSKT--KTRERRSGSRKKLTSHAC--------FH--PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDE  285 (371)
Q Consensus       218 ~~p~~c--~~c~~~~~~~~~l~~H~c--------~h--~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~  285 (371)
                      ..++.|  ..|++.|.....|..|+.        .+  ..|++.|.....|..|+++|.++++|.|..+.|++.|.....
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            457888  789999999999988853        23  669999999999999999999999999972259999999999


Q ss_pred             HHHHh-hhh-cCCCCccC--CCCCCCCCCCCcHHHHhhccCCCCC---------CCCCCCcccccccccccc
Q psy16849        286 LTRHF-RKH-TGDRPFQC--KPNLVNPSIKEGKDLAATAKCPSAD---------TSQPFKTWATVVSTYNFT  344 (371)
Q Consensus       286 L~~H~-r~H-tgeKPykC--~~~~C~ksF~~~~~L~~H~k~h~~~---------c~~~fk~~~~l~~h~~~~  344 (371)
                      |.+|+ +.| .++++|.|  .+  |++.|.+...|++|++.|+++         |++.|.....|..|.+.+
T Consensus        90 l~~H~~~~h~~~~~~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A           90 MKKHFNRFHNIKICVYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             HHHHHHTTSSTTTSCCEECSSS--SCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS
T ss_pred             HHHHHHHhcCCCcceeeCCCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh
Confidence            99999 778 57899999  77  999999999999999999854         666666666676666543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.7e-17  Score=140.85  Aligned_cols=103  Identities=30%  Similarity=0.572  Sum_probs=92.0

Q ss_pred             CCcCCCCCCCchhhcccccc--------c--CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh-h
Q psy16849        223 TKTRERRSGSRKKLTSHACF--------H--PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF-R  291 (371)
Q Consensus       223 c~~c~~~~~~~~~l~~H~c~--------h--~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~-r  291 (371)
                      |..|++.|.....|..|+..        +  ..|++.|.....|..|+++|+++++|.|.+++|++.|.....|.+|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            44556999999999888643        2  25999999999999999999999999996546999999999999998 8


Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      +|.++++|+|.+++|+++|.+...|.+|++.|++
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999999888899999999999999999874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=5.1e-17  Score=126.39  Aligned_cols=86  Identities=66%  Similarity=1.213  Sum_probs=79.7

Q ss_pred             cccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHH
Q psy16849        237 TSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDL  316 (371)
Q Consensus       237 ~~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L  316 (371)
                      ..+.|.+++|++.|.....|..|++.|.++++|.|.++.|++.|.....|.+|+++|+++++|+|.+  |++.|.+...|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHHHH
Confidence            3467777779999999999999999999999999964469999999999999999999999999999  99999999999


Q ss_pred             HhhccCCC
Q psy16849        317 AATAKCPS  324 (371)
Q Consensus       317 ~~H~k~h~  324 (371)
                      .+|++.|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999873

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.67  E-value=2.2e-17  Score=135.08  Aligned_cols=101  Identities=40%  Similarity=0.767  Sum_probs=86.9

Q ss_pred             cccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHH
Q psy16849        237 TSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDL  316 (371)
Q Consensus       237 ~~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L  316 (371)
                      +.+.|.+++|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|.++++|+|.+  |++.|.+...|
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   82 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDHL   82 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHHHH
Confidence            3466766679999999999999999999999999974369999999999999999999999999999  99999999999


Q ss_pred             HhhccCCCCCCCCCC--Cccccccc
Q psy16849        317 AATAKCPSADTSQPF--KTWATVVS  339 (371)
Q Consensus       317 ~~H~k~h~~~c~~~f--k~~~~l~~  339 (371)
                      .+|++.|+++..+.|  ..|+..+.
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~  107 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFA  107 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEES
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccC
Confidence            999999876655444  34444443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.67  E-value=3.8e-17  Score=134.98  Aligned_cols=102  Identities=30%  Similarity=0.538  Sum_probs=86.9

Q ss_pred             ccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHH
Q psy16849        238 SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLA  317 (371)
Q Consensus       238 ~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~  317 (371)
                      .+.|.+..|++.|.....|..|+++| ++++|.|.+  |++.|.....|..|+++|.++++|.|.+.+|++.|.+...|.
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            45677668999999999999999999 899999976  999999999999999999999999998666999999999999


Q ss_pred             hhccCCCCC---------CCCCCCcccccccccc
Q psy16849        318 ATAKCPSAD---------TSQPFKTWATVVSTYN  342 (371)
Q Consensus       318 ~H~k~h~~~---------c~~~fk~~~~l~~h~~  342 (371)
                      +|++.|+++         |++.|.....|..|.+
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            999988765         4444445555544433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=2.8e-16  Score=126.48  Aligned_cols=82  Identities=34%  Similarity=0.622  Sum_probs=77.3

Q ss_pred             CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|.+  |++.|.+...|.+|++.|
T Consensus        21 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H   96 (106)
T 2ee8_A           21 KFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTLAVHKTLH   96 (106)
T ss_dssp             SSSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSHHHHHHHHHHT
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCHHHHHHHHHHh
Confidence            449999999999999999999999999976  9999999999999999999999999999  999999999999999999


Q ss_pred             CCCCCC
Q psy16849        324 SADTSQ  329 (371)
Q Consensus       324 ~~~c~~  329 (371)
                      +++..+
T Consensus        97 ~~~~~~  102 (106)
T 2ee8_A           97 MQTSSP  102 (106)
T ss_dssp             TSCCCC
T ss_pred             CCCCCC
Confidence            977653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.8e-16  Score=125.18  Aligned_cols=81  Identities=35%  Similarity=0.757  Sum_probs=76.5

Q ss_pred             CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ..|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|.++++|+|.+  |++.|.+...|.+|++.|
T Consensus        12 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h   87 (96)
T 2dmd_A           12 EVCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQLTVHLRSH   87 (96)
T ss_dssp             TTTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHHHHHHHTTC
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHh
Confidence            449999999999999999999999999966  9999999999999999999999999999  999999999999999999


Q ss_pred             CCCCC
Q psy16849        324 SADTS  328 (371)
Q Consensus       324 ~~~c~  328 (371)
                      +++..
T Consensus        88 ~~~~~   92 (96)
T 2dmd_A           88 TGDSG   92 (96)
T ss_dssp             CSCCC
T ss_pred             cCCCC
Confidence            97654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=9.7e-17  Score=122.70  Aligned_cols=79  Identities=28%  Similarity=0.708  Sum_probs=74.6

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      +..|++.|.....|..|+++|.++++|.|..  |++.|.....|.+|+++|.++++|+|.+  |++.|.+...|.+|++.
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHHHHH
T ss_pred             CCCCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHHHHh
Confidence            3559999999999999999999999999966  9999999999999999999999999999  99999999999999998


Q ss_pred             CCC
Q psy16849        323 PSA  325 (371)
Q Consensus       323 h~~  325 (371)
                      |++
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            863

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.61  E-value=3.3e-16  Score=116.42  Aligned_cols=59  Identities=25%  Similarity=0.611  Sum_probs=55.3

Q ss_pred             CCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      .||||.|.+  ||+.|.....|.+|+++|+|++||+|.+  ||++|.+...|++|+++|.+++
T Consensus         1 SEKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            489999966  9999999999999999999999999999  9999999999999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.60  E-value=3.5e-15  Score=127.96  Aligned_cols=99  Identities=20%  Similarity=0.394  Sum_probs=84.1

Q ss_pred             ccCCCCCcccCchhHHHHHhh-hcCCCc--------cccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCC
Q psy16849        242 FHPGCGKTYTKSSHLKAHLRT-HTGEKP--------YQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKE  312 (371)
Q Consensus       242 ~h~~Cgk~F~~~s~L~~H~r~-HtgeKp--------f~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~  312 (371)
                      .+..|++.|.....|..|++. |.++++        |.|.+  |++.|.....|..|+++|.++++|+|.+.+|++.|.+
T Consensus        27 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            456699999999999999997 877765        89966  9999999999999999999999999998779999999


Q ss_pred             cHHHHhhccCCCCC---------CCCCCCcccccccccc
Q psy16849        313 GKDLAATAKCPSAD---------TSQPFKTWATVVSTYN  342 (371)
Q Consensus       313 ~~~L~~H~k~h~~~---------c~~~fk~~~~l~~h~~  342 (371)
                      ...|.+|++.|+++         |++.|.....|..|.+
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            99999999999865         4455555555555544

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=5.3e-16  Score=127.42  Aligned_cols=93  Identities=24%  Similarity=0.478  Sum_probs=81.4

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhh---hcCCCCccCCCCCCCCCCCCcHHHHhh
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK---HTGDRPFQCKPNLVNPSIKEGKDLAAT  319 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~---HtgeKPykC~~~~C~ksF~~~~~L~~H  319 (371)
                      |..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|++.   |.++++|.|.+  |++.|.+...|.+|
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H   85 (124)
T 2dlq_A           10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRMELRLH   85 (124)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSHHHHHHH
T ss_pred             CCCCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCHHHHHHH
Confidence            4559999999999999999999999999976  99999999999999995   67899999999  99999999999999


Q ss_pred             ccCCCCCCCCCCCccccccc
Q psy16849        320 AKCPSADTSQPFKTWATVVS  339 (371)
Q Consensus       320 ~k~h~~~c~~~fk~~~~l~~  339 (371)
                      ++.|+++..+.|..|+..+.
T Consensus        86 ~~~h~~~~~~~C~~C~~~f~  105 (124)
T 2dlq_A           86 MVSHTGEMPYKCSSCSQQFM  105 (124)
T ss_dssp             HHHHSSSCSEECSSSCCEES
T ss_pred             HHHcCCCCCccCCCccchhC
Confidence            99998765555554444443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=9.6e-16  Score=117.66  Aligned_cols=82  Identities=29%  Similarity=0.546  Sum_probs=75.4

Q ss_pred             ccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCC-CCCCCCCcHHHHh
Q psy16849        240 ACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNL-VNPSIKEGKDLAA  318 (371)
Q Consensus       240 ~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~-C~ksF~~~~~L~~  318 (371)
                      .|.+..|++.|.....|..|+++|.++++|.|.+++|++.|.....|.+|+++|++   |+|.+++ |++.|.+...|.+
T Consensus         3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~   79 (85)
T 2j7j_A            3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLK   79 (85)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHH
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHH
Confidence            45457799999999999999999999999999555599999999999999999998   9999987 9999999999999


Q ss_pred             hccCCC
Q psy16849        319 TAKCPS  324 (371)
Q Consensus       319 H~k~h~  324 (371)
                      |++.|+
T Consensus        80 H~~~hh   85 (85)
T 2j7j_A           80 HVAECH   85 (85)
T ss_dssp             HHHHCC
T ss_pred             HHHhcC
Confidence            999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.6e-15  Score=118.23  Aligned_cols=79  Identities=34%  Similarity=0.734  Sum_probs=73.5

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCC--CCccCCCCCCCCCCCCcHHHHhhc
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD--RPFQCKPNLVNPSIKEGKDLAATA  320 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge--KPykC~~~~C~ksF~~~~~L~~H~  320 (371)
                      |..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|++.|.++  ++|+|.+  |++.|.+...|.+|+
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~L~~H~   85 (95)
T 2yt9_A           10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRPDHLNGHI   85 (95)
T ss_dssp             CSSSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCBSSHHHHHHHH
T ss_pred             CCCCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchhCCHHHHHHHH
Confidence            3459999999999999999999999999966  999999999999999999997  9999999  999999999999999


Q ss_pred             c-CCCC
Q psy16849        321 K-CPSA  325 (371)
Q Consensus       321 k-~h~~  325 (371)
                      + .|.+
T Consensus        86 ~~~H~~   91 (95)
T 2yt9_A           86 KQVHSG   91 (95)
T ss_dssp             HHTSCC
T ss_pred             HHhcCC
Confidence            7 6654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.55  E-value=9.5e-16  Score=131.02  Aligned_cols=95  Identities=20%  Similarity=0.256  Sum_probs=84.0

Q ss_pred             cCCCCCCCcCCCCCCCchhhccccccc--------CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHH
Q psy16849        217 INTPSKTKTRERRSGSRKKLTSHACFH--------PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTR  288 (371)
Q Consensus       217 ~~~p~~c~~c~~~~~~~~~l~~H~c~h--------~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~  288 (371)
                      ...+|.|..|++.|.....|..|+..|        ..|++.|.....|..|+++|++++||.|..  |++.|..+..|..
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~   96 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQFMSS   96 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCC--CCCCcCCHHHHHH
Confidence            356899999999999999999997544        449999999999999999999999999966  9999999999999


Q ss_pred             HhhhhcCCC------CccCCCCCCCCCCCCcHH
Q psy16849        289 HFRKHTGDR------PFQCKPNLVNPSIKEGKD  315 (371)
Q Consensus       289 H~r~HtgeK------PykC~~~~C~ksF~~~~~  315 (371)
                      |+++|++++      +|+|.+  |++.|.++..
T Consensus        97 H~~~hh~~~p~~~~k~~~C~~--C~k~~~~~~~  127 (133)
T 2lt7_A           97 HIKSVHSQDPSGDSKLYRLHP--CRSLQIRQYA  127 (133)
T ss_dssp             HHHHHTCCCTTSSSCCEEECC--CCSSCCCCCH
T ss_pred             HhHHhcCCCCCCCCCCeecCC--CCchhhhccc
Confidence            999998764      589999  9998876543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.5e-15  Score=121.87  Aligned_cols=80  Identities=29%  Similarity=0.610  Sum_probs=75.2

Q ss_pred             ccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHH
Q psy16849        238 SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLA  317 (371)
Q Consensus       238 ~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~  317 (371)
                      .+.|   .|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|.++++|+|.+  |++.|.+...|.
T Consensus        10 ~~~C---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~   82 (110)
T 2csh_A           10 LYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSFH   82 (110)
T ss_dssp             CEEC---TTSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESCHHHHH
T ss_pred             CEec---cCCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcCHHHHH
Confidence            3455   39999999999999999999999999976  9999999999999999999999999999  999999999999


Q ss_pred             hhccCCC
Q psy16849        318 ATAKCPS  324 (371)
Q Consensus       318 ~H~k~h~  324 (371)
                      +|++.|+
T Consensus        83 ~H~~~~~   89 (110)
T 2csh_A           83 RHVTSCT   89 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHcc
Confidence            9999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.2e-15  Score=112.32  Aligned_cols=73  Identities=27%  Similarity=0.644  Sum_probs=66.9

Q ss_pred             cccccccCCCCCcccCchhHHHHHh-hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCC
Q psy16849        237 TSHACFHPGCGKTYTKSSHLKAHLR-THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIK  311 (371)
Q Consensus       237 ~~H~c~h~~Cgk~F~~~s~L~~H~r-~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~  311 (371)
                      +.+.|.++.|++.|.....|..|++ .|.++++|.|.+++|++.|..+..|.+|+++|++++||+|.+  |+++|.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~F~   79 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF--SGPSSG   79 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS--SSCCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC--CCCCCC
Confidence            3467778889999999999999999 799999999965559999999999999999999999999999  999994

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=2.7e-15  Score=122.62  Aligned_cols=80  Identities=15%  Similarity=0.203  Sum_probs=72.7

Q ss_pred             CCCCCcccCchhHHHHHhh--hcCCCccc-cccCCCCCcc--cChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHh
Q psy16849        244 PGCGKTYTKSSHLKAHLRT--HTGEKPYQ-CKWKGCGWKF--ARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAA  318 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~--HtgeKpf~-C~~~~CgK~F--~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~  318 (371)
                      ..|++.|.....|..|+++  |.+++++. |.+  |++.|  .....|.+|+++|++++||+|.+  |+++|.+...|++
T Consensus        23 ~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~   98 (115)
T 2dmi_A           23 KDCSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSV   98 (115)
T ss_dssp             SSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCSS--SCCBCSSHHHHHH
T ss_pred             CccCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECCC--CCCccCCHHHHHH
Confidence            4599999999999999998  88787765 966  99999  99999999999999999999999  9999999999999


Q ss_pred             hccCCCCCC
Q psy16849        319 TAKCPSADT  327 (371)
Q Consensus       319 H~k~h~~~c  327 (371)
                      |++.|+...
T Consensus        99 H~~~hh~~~  107 (115)
T 2dmi_A           99 HMIKTKHYQ  107 (115)
T ss_dssp             HHHHTTTTT
T ss_pred             HHHHhCCcc
Confidence            999988543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=9e-15  Score=118.31  Aligned_cols=80  Identities=13%  Similarity=0.225  Sum_probs=72.1

Q ss_pred             CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhcc-C
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAK-C  322 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k-~  322 (371)
                      ..|++.|.....|..|+++|.  ++|.|.+  |++.|.....|.+|++ |++++||+|.+  |++.|.+...|++|++ .
T Consensus        20 ~~C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~~~~L~~H~~~~   92 (107)
T 1wjp_A           20 RLCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKSSFSIWRHQVEV   92 (107)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSSHHHHHHHHHHT
T ss_pred             CCCCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCCHHHHHHHHHHH
Confidence            449999999999999999994  7999976  9999999999999996 99999999999  9999999999999997 7


Q ss_pred             CCCCCCCC
Q psy16849        323 PSADTSQP  330 (371)
Q Consensus       323 h~~~c~~~  330 (371)
                      |.++..+.
T Consensus        93 H~~~~~~~  100 (107)
T 1wjp_A           93 HNQNNMAP  100 (107)
T ss_dssp             SCCCCCCC
T ss_pred             cCCCCCCC
Confidence            77665543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=3.6e-15  Score=119.70  Aligned_cols=79  Identities=10%  Similarity=0.119  Sum_probs=71.8

Q ss_pred             CCcccCchhHHHHHhhhcCCCccccccCCCCCccc-ChhHHHHHhhhhcC-CCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        247 GKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFA-RSDELTRHFRKHTG-DRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       247 gk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~-~ks~L~~H~r~Htg-eKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ...+.....+..|+++|.++++|.|.+  |++.|. .+..|.+|+++|++ +++|+|.+  |++.|.++..|++|++.|+
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHc
Confidence            345666777889999999999999976  999999 99999999999999 99999999  9999999999999999999


Q ss_pred             CCCCC
Q psy16849        325 ADTSQ  329 (371)
Q Consensus       325 ~~c~~  329 (371)
                      ++...
T Consensus        79 ~~kp~   83 (98)
T 2gqj_A           79 SAKPS   83 (98)
T ss_dssp             CSCSS
T ss_pred             CCCCC
Confidence            77653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.46  E-value=1.2e-13  Score=110.89  Aligned_cols=83  Identities=25%  Similarity=0.359  Sum_probs=75.5

Q ss_pred             cCCCCCCCcCCCCCCCchhhcccccc--------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHH
Q psy16849        217 INTPSKTKTRERRSGSRKKLTSHACF--------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTR  288 (371)
Q Consensus       217 ~~~p~~c~~c~~~~~~~~~l~~H~c~--------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~  288 (371)
                      ...++.|..|++.|.....|..|+..        |..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~   91 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCHHHHHH
Confidence            35689999999999999999888644        3459999999999999999999999999976  9999999999999


Q ss_pred             HhhhhcCCCCccC
Q psy16849        289 HFRKHTGDRPFQC  301 (371)
Q Consensus       289 H~r~HtgeKPykC  301 (371)
                      |+++|.++++|.+
T Consensus        92 H~~~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCCcC
Confidence            9999999999975

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=3.2e-14  Score=109.70  Aligned_cols=77  Identities=25%  Similarity=0.409  Sum_probs=68.0

Q ss_pred             hHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCC----CCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        255 HLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD----RPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       255 ~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge----KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      .|..|+++|+++++|.|.+  |++.|.....|.+|++.|.++    ++|+|.+  |++.|.+...|.+|++.|+++....
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcc
Confidence            4678999999999999976  999999999999999877765    7999999  9999999999999999999887766


Q ss_pred             CCccc
Q psy16849        331 FKTWA  335 (371)
Q Consensus       331 fk~~~  335 (371)
                      +..++
T Consensus        78 ~~~~~   82 (86)
T 1x6h_A           78 GENSG   82 (86)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            65554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=3.1e-14  Score=107.25  Aligned_cols=65  Identities=32%  Similarity=0.664  Sum_probs=60.7

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +.++|+++++|.|.+  |++.|.....|.+|+++|.+++||+|.+  |++.|.+...|++|++.|+++.
T Consensus         5 ~~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            456899999999976  9999999999999999999999999999  9999999999999999998654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.7e-14  Score=108.88  Aligned_cols=68  Identities=31%  Similarity=0.551  Sum_probs=62.0

Q ss_pred             hHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhh-hhcCC-CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        255 HLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFR-KHTGD-RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       255 ~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r-~Htge-KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      .|.+|+++|+++++|.|.+  |++.|.....|.+|++ .|.++ ++|+|.+  |++.|.+...|.+|++.|+.+
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence            4567999999999999976  9999999999999997 78875 8999999  999999999999999988754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.6e-13  Score=110.51  Aligned_cols=73  Identities=11%  Similarity=0.169  Sum_probs=67.4

Q ss_pred             CcccCchhHHHHHhhhcCCCccccccCCCCCcc-cChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhh-ccCCCC
Q psy16849        248 KTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKF-ARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAAT-AKCPSA  325 (371)
Q Consensus       248 k~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F-~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H-~k~h~~  325 (371)
                      ..|.....|..|++.|.++++|.|..  |++.| ..+..|..|+++| +++||+|.+  |+++|.++..|++| ++.|.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence            35677788999999999999999966  99999 9999999999999 999999999  99999999999999 888864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.42  E-value=3.3e-13  Score=109.03  Aligned_cols=86  Identities=16%  Similarity=0.123  Sum_probs=77.4

Q ss_pred             cCCCCCCCcCCCCCCCchhhccccc------ccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh
Q psy16849        217 INTPSKTKTRERRSGSRKKLTSHAC------FHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF  290 (371)
Q Consensus       217 ~~~p~~c~~c~~~~~~~~~l~~H~c------~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~  290 (371)
                      ...++.|..|++.|.....|..|+.      .|..|++.|.....|..|++ |+++++|.|.+  |++.|.....|.+|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~~~~L~~H~   89 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKSSFSIWRHQ   89 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCCHHHHHHHH
Confidence            3568999999999999999998865      45669999999999999996 99999999977  999999999999999


Q ss_pred             h-hhcCCCCccCCCCC
Q psy16849        291 R-KHTGDRPFQCKPNL  305 (371)
Q Consensus       291 r-~HtgeKPykC~~~~  305 (371)
                      + +|.++++|.|.-..
T Consensus        90 ~~~H~~~~~~~~~~p~  105 (107)
T 1wjp_A           90 VEVHNQNNMAPTSGPS  105 (107)
T ss_dssp             HHTSCCCCCCCCCCSC
T ss_pred             HHHcCCCCCCCCCCCC
Confidence            7 99999999987643

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.7e-13  Score=103.25  Aligned_cols=63  Identities=24%  Similarity=0.621  Sum_probs=42.7

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      .+.++++|.|.+  |++.|.....|.+|+++|+++++|+|.+  |++.|.+...|.+|++.|+++..
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCC
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCC
Confidence            345566677754  7777777777777777777777777777  77777777777777777665544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=9.8e-14  Score=103.81  Aligned_cols=65  Identities=28%  Similarity=0.477  Sum_probs=59.8

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      .|+++++|.|.+  |++.|.....|.+|+++|+++++|+|.+  |++.|.+...|.+|++.|+++...+
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCCC
Confidence            478899999966  9999999999999999999999999999  9999999999999999999776543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.39  E-value=1.5e-13  Score=114.62  Aligned_cols=73  Identities=16%  Similarity=0.195  Sum_probs=66.1

Q ss_pred             CcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        248 KTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       248 k~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +.|.....|..|+ .|++++||.|.+  |++.|.....|.+|+++|  ++||+|.+  |+++|.+...|++|++.|++++
T Consensus        55 ~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           55 QLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             GGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCCC
T ss_pred             cccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCcc
Confidence            4455777777777 699999999976  999999999999999999  89999999  9999999999999999999876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=2.1e-13  Score=103.09  Aligned_cols=64  Identities=23%  Similarity=0.571  Sum_probs=56.5

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      ..+.++++|.|..  |++.|.....|.+|+++|+++++|+|.+  |++.|.+...|++|++.|++++.
T Consensus        10 ~~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           10 HMTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             -CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCC
T ss_pred             cccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCC
Confidence            3567889999966  9999999999999999999999999999  99999999999999999987653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.7e-13  Score=103.01  Aligned_cols=68  Identities=34%  Similarity=0.682  Sum_probs=59.1

Q ss_pred             hHHHHHh-hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        255 HLKAHLR-THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       255 ~L~~H~r-~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      .|..|+. +|.++++|.|.+..|++.|.....|.+|+++|.++++|+|.+  |+++|.+...|.+|++.|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            3444543 788999999964469999999999999999999999999999  9999999999999999874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.7e-13  Score=103.13  Aligned_cols=75  Identities=21%  Similarity=0.363  Sum_probs=68.4

Q ss_pred             cCCCccccccCCCCCcccChhHHHHHhh-hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCcccccc
Q psy16849        264 TGEKPYQCKWKGCGWKFARSDELTRHFR-KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVV  338 (371)
Q Consensus       264 tgeKpf~C~~~~CgK~F~~ks~L~~H~r-~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~~~l~  338 (371)
                      +++++|.|.++.|++.|.....|.+|++ .|.++++|+|.+.+|++.|.++..|++|++.|+++..+.|..++..|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            5789999987789999999999999999 79999999999888999999999999999999988888887776543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.36  E-value=1.5e-14  Score=113.00  Aligned_cols=77  Identities=36%  Similarity=0.592  Sum_probs=71.6

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |..|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|.+ ++|.|..  |++.|.+...|.+|++.
T Consensus         6 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~--C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDK--VEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHH--HHHHHHHHhhhHHHHHH
Confidence            3459999999999999999999999999966  99999999999999999985 8999999  99999999999999987


Q ss_pred             CC
Q psy16849        323 PS  324 (371)
Q Consensus       323 h~  324 (371)
                      ++
T Consensus        81 ~h   82 (88)
T 1llm_C           81 LK   82 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.5e-13  Score=101.27  Aligned_cols=62  Identities=21%  Similarity=0.429  Sum_probs=57.2

Q ss_pred             HhhhcCCCccccccCCCCCcccChhHHHHHhhh-h-cCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        260 LRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK-H-TGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       260 ~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~-H-tgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      +++|+++++|.|..  |++.|.....|.+|++. | .++++|+|.+  |+++|.+...|.+|++.|++
T Consensus         2 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            46799999999966  99999999999999998 7 6999999999  99999999999999998874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.36  E-value=4.8e-13  Score=99.19  Aligned_cols=55  Identities=38%  Similarity=0.712  Sum_probs=50.0

Q ss_pred             cccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       239 H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +.|  ..||+.|.....|..|+++|+|++||.|..  ||+.|.....|.+|+++|+|++
T Consensus         5 y~C--~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            5 FFC--NFCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             EEC--TTTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             ccC--CCCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            444  449999999999999999999999999966  9999999999999999999975

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.2e-12  Score=102.87  Aligned_cols=81  Identities=33%  Similarity=0.589  Sum_probs=73.8

Q ss_pred             CCCCCCCcCCCCCCCchhhcccccccC--------CCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHH
Q psy16849        218 NTPSKTKTRERRSGSRKKLTSHACFHP--------GCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH  289 (371)
Q Consensus       218 ~~p~~c~~c~~~~~~~~~l~~H~c~h~--------~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H  289 (371)
                      ..++.|..|++.|.....|..|+..+.        .|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHH
Confidence            458999999999999999999876543        49999999999999999999999999976  99999999999999


Q ss_pred             hhhhcCCCCcc
Q psy16849        290 FRKHTGDRPFQ  300 (371)
Q Consensus       290 ~r~HtgeKPyk  300 (371)
                      +++|+++++..
T Consensus        84 ~~~h~~~~~p~   94 (96)
T 2dmd_A           84 LRSHTGDSGPS   94 (96)
T ss_dssp             HTTCCSCCCCC
T ss_pred             HHHhcCCCCCC
Confidence            99999987654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=2.5e-13  Score=107.65  Aligned_cols=63  Identities=22%  Similarity=0.405  Sum_probs=56.6

Q ss_pred             HhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhcc-CCCCC
Q psy16849        260 LRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAK-CPSAD  326 (371)
Q Consensus       260 ~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k-~h~~~  326 (371)
                      +..+.+.++|.|.+  |++.|.++..|.+|+++|++++||+|.+  |+++|.++..|++|++ +|.++
T Consensus        20 ~~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            45677889999966  9999999999999999999999999999  9999999999999974 56544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.35  E-value=2.9e-13  Score=96.71  Aligned_cols=56  Identities=25%  Similarity=0.540  Sum_probs=50.1

Q ss_pred             CCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |+++|.|.+  |++.|.....|..|+++|++++||+|.+  |+++|.+...|.+|++.|+
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhc
Confidence            578999966  9999999999999999999999999999  9999999999999999887

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.3e-13  Score=112.57  Aligned_cols=86  Identities=17%  Similarity=0.150  Sum_probs=71.9

Q ss_pred             chhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhh--hcCCCCcc-CCCCCCCCCC--CCcHHHHhhccCCCCCC
Q psy16849        253 SSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK--HTGDRPFQ-CKPNLVNPSI--KEGKDLAATAKCPSADT  327 (371)
Q Consensus       253 ~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~--HtgeKPyk-C~~~~C~ksF--~~~~~L~~H~k~h~~~c  327 (371)
                      ...|..|+++|+++++|.|.+  |++.|.....|..|+++  |.+++++. |.+  |++.|  .+...|.+|++.|.++.
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             chhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCc
Confidence            456889999999999999966  99999999999999999  88888765 999  88888  99999999999998775


Q ss_pred             CCCCCcccccccccc
Q psy16849        328 SQPFKTWATVVSTYN  342 (371)
Q Consensus       328 ~~~fk~~~~l~~h~~  342 (371)
                      .+.|..|+..|....
T Consensus        80 ~~~C~~C~k~f~~~~   94 (115)
T 2dmi_A           80 VLKCMYCGHSFESLQ   94 (115)
T ss_dssp             SCBCSSSCCBCSSHH
T ss_pred             ceECCCCCCccCCHH
Confidence            555555555544433

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=2.4e-12  Score=97.91  Aligned_cols=57  Identities=47%  Similarity=0.846  Sum_probs=53.9

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      |..|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|
T Consensus        21 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3459999999999999999999999999976  99999999999999999999999998

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.8e-13  Score=101.10  Aligned_cols=59  Identities=24%  Similarity=0.447  Sum_probs=54.8

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcC---CCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG---DRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg---eKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      +|+++++|.|.+  |++.|.....|.+|+++|.+   +++|+|.+  |++.|.+...|.+|++.+|
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhC
Confidence            488999999976  99999999999999999996   89999999  9999999999999996555

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.29  E-value=2e-12  Score=92.32  Aligned_cols=56  Identities=30%  Similarity=0.588  Sum_probs=51.4

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      ||.|.+  |++.|.....|..|+++|+++++|+|.+  |+++|.+...|.+|++.|++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            689966  9999999999999999999999999999  9999999999999999998654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.29  E-value=1e-12  Score=103.11  Aligned_cols=71  Identities=18%  Similarity=0.396  Sum_probs=60.7

Q ss_pred             cCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC--CCCCCCcccccc
Q psy16849        264 TGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD--TSQPFKTWATVV  338 (371)
Q Consensus       264 tgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~--c~~~fk~~~~l~  338 (371)
                      +++++|.|.+  |++.|.....|.+|+++|.++++|+|.+  |++.|.+...|.+|++.|+++  ..+.|..|+..+
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f   75 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGF   75 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCB
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchh
Confidence            5789999976  9999999999999999999999999999  999999999999999998865  334444444333

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.27  E-value=1.4e-12  Score=101.21  Aligned_cols=78  Identities=41%  Similarity=0.718  Sum_probs=68.5

Q ss_pred             CCCCCC--cCCCCCCCchhhcccccc--------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHH
Q psy16849        219 TPSKTK--TRERRSGSRKKLTSHACF--------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTR  288 (371)
Q Consensus       219 ~p~~c~--~c~~~~~~~~~l~~H~c~--------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~  288 (371)
                      .++.|.  .|++.|.....|..|+..        |..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~   80 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKR   80 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHHHHHH
Confidence            478897  699999999999888654        3449999999999999999999999999966  9999999999999


Q ss_pred             HhhhhcCCCC
Q psy16849        289 HFRKHTGDRP  298 (371)
Q Consensus       289 H~r~HtgeKP  298 (371)
                      |+++|+|++.
T Consensus        81 H~~~H~~~k~   90 (90)
T 1a1h_A           81 HTKIHLRQKD   90 (90)
T ss_dssp             HHGGGGC---
T ss_pred             HHHHhcccCC
Confidence            9999999863

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=1.6e-12  Score=105.16  Aligned_cols=77  Identities=23%  Similarity=0.411  Sum_probs=65.9

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC-------CCCCcc
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS-------QPFKTW  334 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~-------~~fk~~  334 (371)
                      .|+++++|.| .  |++.|.....|.+|++.|.++++|+|.+  |++.|.+...|.+|++.|+++..       +.|...
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            5889999999 7  9999999999999999999999999999  99999999999999999987644       444455


Q ss_pred             ccccccccc
Q psy16849        335 ATVVSTYNF  343 (371)
Q Consensus       335 ~~l~~h~~~  343 (371)
                      ..|..|.+.
T Consensus        79 ~~l~~H~~~   87 (110)
T 2csh_A           79 DSFHRHVTS   87 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            555555443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=3.9e-12  Score=95.36  Aligned_cols=62  Identities=24%  Similarity=0.518  Sum_probs=49.0

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      .+...++|.|.+++|++.|.....|.+|+++|++++||+|.+.+|++.|.+...|.+|++.|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567788886656888888888888888888888888886545888888888888888765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.26  E-value=1.4e-12  Score=99.22  Aligned_cols=74  Identities=36%  Similarity=0.604  Sum_probs=66.9

Q ss_pred             CCCCCcCCCCCCCchhhcccccc--------cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhh
Q psy16849        220 PSKTKTRERRSGSRKKLTSHACF--------HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       220 p~~c~~c~~~~~~~~~l~~H~c~--------h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      |+.|..|++.|.....|..|+..        +..|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHHHH
Confidence            57899999999999999888643        3459999999999999999999999999966  9999999999999999


Q ss_pred             hhcC
Q psy16849        292 KHTG  295 (371)
Q Consensus       292 ~Htg  295 (371)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9975

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.25  E-value=9.8e-13  Score=100.64  Aligned_cols=76  Identities=22%  Similarity=0.392  Sum_probs=65.7

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC----C---CCCCCCcccccccc
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA----D---TSQPFKTWATVVST  340 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~----~---c~~~fk~~~~l~~h  340 (371)
                      ||.|.++.|++.|.....|..|+++|.++++|+|.+.+|+++|.+...|++|++.|++    .   |++.|.....|..|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l~~H   80 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH   80 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHHHHH
Confidence            6899444499999999999999999999999999887899999999999999998874    4   77778777777776


Q ss_pred             ccc
Q psy16849        341 YNF  343 (371)
Q Consensus       341 ~~~  343 (371)
                      .+.
T Consensus        81 ~~~   83 (85)
T 2j7j_A           81 VAE   83 (85)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=6.1e-12  Score=90.78  Aligned_cols=56  Identities=32%  Similarity=0.678  Sum_probs=51.1

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhc-cCCCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATA-KCPSAD  326 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~-k~h~~~  326 (371)
                      +||.|..  |++.|.....|.+|+++|+++++|+|.+  |+++|.+...|.+|+ +.|.++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            5899966  9999999999999999999999999999  999999999999997 566644

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=4.2e-12  Score=103.95  Aligned_cols=66  Identities=20%  Similarity=0.349  Sum_probs=48.6

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhh-hh---cCCCCccCCCCCCCCCCCCcHHHHhh-ccCCCCCCCCCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFR-KH---TGDRPFQCKPNLVNPSIKEGKDLAAT-AKCPSADTSQPFK  332 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r-~H---tgeKPykC~~~~C~ksF~~~~~L~~H-~k~h~~~c~~~fk  332 (371)
                      -+|++||.|..  |++.|..+..|.+|++ +|   .+++||+|.+  ||++|.++..|.+| ++.|.+++.+.|.
T Consensus        13 ~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           13 KKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            45777888855  8888888888888876 47   5577888888  88888888888888 6777776655443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.21  E-value=3.1e-13  Score=105.49  Aligned_cols=74  Identities=26%  Similarity=0.493  Sum_probs=62.9

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC------CCCCCCCccccccc
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA------DTSQPFKTWATVVS  339 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~------~c~~~fk~~~~l~~  339 (371)
                      ++||.|.+  |++.|.....|..|+++|++++||+|.+  |+++|.+...|.+|++.|++      .|++.|.....|..
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~   76 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLEN   76 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHH
Confidence            58999976  9999999999999999999999999999  99999999999999999884      24555555555655


Q ss_pred             cccc
Q psy16849        340 TYNF  343 (371)
Q Consensus       340 h~~~  343 (371)
                      |+.-
T Consensus        77 H~~~   80 (88)
T 1llm_C           77 EVAR   80 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.20  E-value=1.6e-11  Score=97.04  Aligned_cols=77  Identities=31%  Similarity=0.574  Sum_probs=68.1

Q ss_pred             cCCCCCCCc--CCCCCCCchhhccccccc----------CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChh
Q psy16849        217 INTPSKTKT--RERRSGSRKKLTSHACFH----------PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSD  284 (371)
Q Consensus       217 ~~~p~~c~~--c~~~~~~~~~l~~H~c~h----------~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks  284 (371)
                      ...++.|..  |++.|.....|..|+..+          ..|++.|.....|..|+++|+++++|.|.+  |++.|....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   89 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSD   89 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCHH
Confidence            345788885  999999999998886433          359999999999999999999999999966  999999999


Q ss_pred             HHHHHhhhhcC
Q psy16849        285 ELTRHFRKHTG  295 (371)
Q Consensus       285 ~L~~H~r~Htg  295 (371)
                      .|.+|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999975

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.20  E-value=1.5e-11  Score=92.67  Aligned_cols=54  Identities=39%  Similarity=0.882  Sum_probs=51.1

Q ss_pred             CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCc
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF  299 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPy  299 (371)
                      ..|++.|.....|..|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||
T Consensus        21 ~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           21 DRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             TTSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            449999999999999999999999999976  999999999999999999999997

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=5.8e-11  Score=93.16  Aligned_cols=60  Identities=25%  Similarity=0.451  Sum_probs=54.2

Q ss_pred             ccCCCCCcccCchhHHHHHhh-hcCCCc--------cccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        242 FHPGCGKTYTKSSHLKAHLRT-HTGEKP--------YQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       242 ~h~~Cgk~F~~~s~L~~H~r~-HtgeKp--------f~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .+..|++.|.....|..|+++ |.++++        |.|..  |++.|..+..|.+|+++|++++||+|..
T Consensus        27 ~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             cccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            345699999999999999998 999888        99966  9999999999999999999999999973

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=4.2e-11  Score=91.98  Aligned_cols=64  Identities=23%  Similarity=0.495  Sum_probs=58.4

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCC----CccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGE----KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSI  310 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~Htge----Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF  310 (371)
                      |..|++.|.....|..|++.|.++    ++|.|.+  |++.|..+..|.+|+++|.+++++.|..  |+.+|
T Consensus        18 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~--~~~~~   85 (86)
T 1x6h_A           18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGEN--SGPSS   85 (86)
T ss_dssp             CSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCCC--CCCCC
T ss_pred             CCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccCC--CCCCC
Confidence            345999999999999999987765    7999966  9999999999999999999999999999  88876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=1.9e-11  Score=99.98  Aligned_cols=62  Identities=23%  Similarity=0.381  Sum_probs=55.5

Q ss_pred             CCCCCcccCchhHHHHHh-hh---cCCCccccccCCCCCcccChhHHHHH-hhhhcCCCCccCCCCCCC
Q psy16849        244 PGCGKTYTKSSHLKAHLR-TH---TGEKPYQCKWKGCGWKFARSDELTRH-FRKHTGDRPFQCKPNLVN  307 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r-~H---tgeKpf~C~~~~CgK~F~~ks~L~~H-~r~HtgeKPykC~~~~C~  307 (371)
                      ..||+.|.....|..|++ .|   .+++||.|..  ||+.|..+..|.+| +++|+|++||+|.++.+.
T Consensus        22 ~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~   88 (102)
T 2ghf_A           22 KYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTMVKRN   88 (102)
T ss_dssp             SSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEECCCS
T ss_pred             CCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCcccCC
Confidence            459999999999999998 59   6789999966  99999999999999 899999999999984333

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4.9e-13  Score=99.59  Aligned_cols=71  Identities=18%  Similarity=0.317  Sum_probs=62.8

Q ss_pred             CchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        252 KSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       252 ~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      ....|..|+++|.++++|.|.+  |++.|.....|..       +++|+|.+  |++.|.+...|.+|++.|+++..+.|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             cchhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            3457889999999999999966  9999999998876       79999999  99999999999999999998877665


Q ss_pred             Cc
Q psy16849        332 KT  333 (371)
Q Consensus       332 k~  333 (371)
                      ..
T Consensus        71 ~~   72 (73)
T 2ctu_A           71 SS   72 (73)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=82.88  Aligned_cols=44  Identities=36%  Similarity=0.677  Sum_probs=41.3

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=2.9e-11  Score=82.73  Aligned_cols=44  Identities=25%  Similarity=0.507  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|..  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=2.9e-11  Score=82.90  Aligned_cols=44  Identities=41%  Similarity=0.746  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4888999999999966  9999999999999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=82.73  Aligned_cols=44  Identities=39%  Similarity=0.641  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.10  E-value=2.6e-11  Score=82.85  Aligned_cols=44  Identities=34%  Similarity=0.551  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=82.81  Aligned_cols=44  Identities=36%  Similarity=0.684  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=82.71  Aligned_cols=44  Identities=36%  Similarity=0.637  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4889999999999966  9999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=82.57  Aligned_cols=44  Identities=34%  Similarity=0.573  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999966  9999999999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=82.44  Aligned_cols=44  Identities=36%  Similarity=0.597  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=3.9e-11  Score=82.20  Aligned_cols=44  Identities=36%  Similarity=0.677  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.09  E-value=3e-11  Score=82.68  Aligned_cols=44  Identities=36%  Similarity=0.684  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=82.68  Aligned_cols=44  Identities=39%  Similarity=0.667  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.09  E-value=6.3e-11  Score=91.52  Aligned_cols=74  Identities=32%  Similarity=0.661  Sum_probs=66.7

Q ss_pred             CCCCCCc--CCCCCCCchhhcccccccC----------CCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHH
Q psy16849        219 TPSKTKT--RERRSGSRKKLTSHACFHP----------GCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDEL  286 (371)
Q Consensus       219 ~p~~c~~--c~~~~~~~~~l~~H~c~h~----------~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L  286 (371)
                      .++.|..  |++.|.....|..|+..+.          .|++.|.....|..|+++|+++++|.|..  |++.|.....|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHHHH
Confidence            4688988  9999999999988865432          59999999999999999999999999966  99999999999


Q ss_pred             HHHhhhhc
Q psy16849        287 TRHFRKHT  294 (371)
Q Consensus       287 ~~H~r~Ht  294 (371)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999984

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.5e-11  Score=82.33  Aligned_cols=44  Identities=34%  Similarity=0.631  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999976  9999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.8e-11  Score=81.77  Aligned_cols=44  Identities=30%  Similarity=0.496  Sum_probs=41.3

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            2 SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.3e-11  Score=81.88  Aligned_cols=44  Identities=36%  Similarity=0.610  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            2 SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.3e-11  Score=81.67  Aligned_cols=43  Identities=26%  Similarity=0.488  Sum_probs=41.0

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678999999999966  9999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=82.80  Aligned_cols=44  Identities=36%  Similarity=0.573  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4889999999999966  9999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=82.01  Aligned_cols=44  Identities=36%  Similarity=0.584  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4888999999999966  9999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4e-11  Score=82.19  Aligned_cols=44  Identities=32%  Similarity=0.587  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=82.05  Aligned_cols=44  Identities=41%  Similarity=0.767  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.3e-11  Score=82.48  Aligned_cols=44  Identities=41%  Similarity=0.704  Sum_probs=41.3

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=82.77  Aligned_cols=44  Identities=34%  Similarity=0.673  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4888999999999976  9999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.1e-11  Score=82.61  Aligned_cols=44  Identities=36%  Similarity=0.697  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.1e-11  Score=81.64  Aligned_cols=44  Identities=34%  Similarity=0.653  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.1e-11  Score=81.99  Aligned_cols=44  Identities=41%  Similarity=0.710  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.5e-11  Score=81.68  Aligned_cols=44  Identities=43%  Similarity=0.778  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999976  9999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=82.15  Aligned_cols=44  Identities=36%  Similarity=0.702  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4888999999999966  9999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.7e-11  Score=81.68  Aligned_cols=44  Identities=36%  Similarity=0.632  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.4e-11  Score=82.40  Aligned_cols=44  Identities=39%  Similarity=0.763  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.6e-11  Score=82.17  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.9e-11  Score=82.11  Aligned_cols=44  Identities=41%  Similarity=0.677  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3e-11  Score=82.67  Aligned_cols=44  Identities=41%  Similarity=0.721  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.07  E-value=5.4e-11  Score=81.27  Aligned_cols=44  Identities=39%  Similarity=0.678  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.+...|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.9e-11  Score=82.24  Aligned_cols=44  Identities=30%  Similarity=0.498  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4888999999999976  9999999999999999999999999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=82.50  Aligned_cols=44  Identities=27%  Similarity=0.613  Sum_probs=41.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999966  9999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.1e-11  Score=81.85  Aligned_cols=44  Identities=32%  Similarity=0.505  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.4e-11  Score=81.84  Aligned_cols=44  Identities=36%  Similarity=0.652  Sum_probs=41.1

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.6e-11  Score=82.31  Aligned_cols=44  Identities=36%  Similarity=0.659  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.06  E-value=1.4e-10  Score=86.76  Aligned_cols=60  Identities=72%  Similarity=1.314  Sum_probs=53.8

Q ss_pred             hhhcccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhh
Q psy16849        234 KKLTSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       234 ~~l~~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      ..++.|.|.+++|++.|.....|..|+++|+++++|.|.++.|++.|..+..|.+|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345667888788999999999999999999999999996556999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.9e-11  Score=81.60  Aligned_cols=44  Identities=34%  Similarity=0.720  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999966  9999999999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=6.2e-11  Score=81.08  Aligned_cols=44  Identities=30%  Similarity=0.610  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.7e-11  Score=81.50  Aligned_cols=43  Identities=42%  Similarity=0.677  Sum_probs=41.1

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788999999999966  9999999999999999999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.9e-11  Score=87.82  Aligned_cols=57  Identities=19%  Similarity=0.394  Sum_probs=51.8

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC-CCCCCCCCCCcHHHHhhccCCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK-PNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~-~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      ..+++||.|.+  |++.|. ...|..|+++ ++++||+|. .  |+++|..+..|.+|++.|..
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSS
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcc
Confidence            45788999966  999999 9999999999 999999999 9  99999999999999998764

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.05  E-value=7.8e-11  Score=80.70  Aligned_cols=44  Identities=27%  Similarity=0.461  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.1e-11  Score=80.78  Aligned_cols=44  Identities=25%  Similarity=0.299  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=81.78  Aligned_cols=44  Identities=36%  Similarity=0.687  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999976  9999999999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.5e-11  Score=81.33  Aligned_cols=44  Identities=36%  Similarity=0.632  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.2e-11  Score=80.32  Aligned_cols=44  Identities=39%  Similarity=0.736  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhh-hhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFR-KHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r-~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|++ +|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999 999999999998

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=1.9e-10  Score=85.69  Aligned_cols=55  Identities=24%  Similarity=0.652  Sum_probs=51.4

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCc
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF  299 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPy  299 (371)
                      |..|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|++++|.
T Consensus        12 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           12 CSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CSSSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            3459999999999999999999999999976  999999999999999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.03  E-value=2.4e-10  Score=81.29  Aligned_cols=53  Identities=36%  Similarity=0.805  Sum_probs=49.6

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |..|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|.+++
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCCCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            3559999999999999999999999999966  9999999999999999999876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.03  E-value=1.6e-10  Score=91.49  Aligned_cols=57  Identities=30%  Similarity=0.637  Sum_probs=50.6

Q ss_pred             cccccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh-hhhcCCC
Q psy16849        237 TSHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF-RKHTGDR  297 (371)
Q Consensus       237 ~~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~-r~HtgeK  297 (371)
                      +.|.|.  .||+.|.....|..|+++|++++||.|.+  |++.|.++..|.+|+ ++|.+|.
T Consensus        27 ~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCP--VCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECT--TSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECC--CCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            345664  49999999999999999999999999976  999999999999996 5798774

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.7e-11  Score=80.71  Aligned_cols=44  Identities=34%  Similarity=0.562  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.7e-11  Score=80.21  Aligned_cols=44  Identities=36%  Similarity=0.699  Sum_probs=41.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999997

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=79.94  Aligned_cols=44  Identities=41%  Similarity=0.746  Sum_probs=39.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.8e-11  Score=80.05  Aligned_cols=44  Identities=39%  Similarity=0.690  Sum_probs=39.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4788899999999966  9999999999999999999999999975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.02  E-value=8.6e-11  Score=80.49  Aligned_cols=44  Identities=39%  Similarity=0.685  Sum_probs=41.0

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=79.73  Aligned_cols=44  Identities=39%  Similarity=0.672  Sum_probs=40.3

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.01  E-value=1.2e-10  Score=77.98  Aligned_cols=42  Identities=36%  Similarity=0.674  Sum_probs=38.3

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678899999999966  999999999999999999999999985

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2e-10  Score=81.73  Aligned_cols=48  Identities=35%  Similarity=0.722  Sum_probs=44.4

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhh-hhcCCCCccCCCCCCCCCCCCc
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFR-KHTGDRPFQCKPNLVNPSIKEG  313 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r-~HtgeKPykC~~~~C~ksF~~~  313 (371)
                      .|+++++|.|.+  |++.|.....|.+|++ +|++++||+|.+  |+++|.++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCCC
Confidence            578899999966  9999999999999997 999999999999  99999863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=77.51  Aligned_cols=42  Identities=29%  Similarity=0.472  Sum_probs=38.2

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999966  999999999999999999999999985

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=79.62  Aligned_cols=44  Identities=36%  Similarity=0.719  Sum_probs=40.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=79.87  Aligned_cols=44  Identities=39%  Similarity=0.695  Sum_probs=39.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            4788899999999966  9999999999999999999999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.9e-11  Score=79.92  Aligned_cols=44  Identities=34%  Similarity=0.633  Sum_probs=40.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.2e-10  Score=79.70  Aligned_cols=44  Identities=34%  Similarity=0.637  Sum_probs=40.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.68  Aligned_cols=44  Identities=41%  Similarity=0.709  Sum_probs=40.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            4788999999999966  9999999999999999999999999985

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.92  Aligned_cols=44  Identities=39%  Similarity=0.650  Sum_probs=40.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=79.15  Aligned_cols=44  Identities=34%  Similarity=0.598  Sum_probs=39.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788899999999966  9999999999999999999999999975

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.4e-10  Score=92.64  Aligned_cols=59  Identities=19%  Similarity=0.383  Sum_probs=53.8

Q ss_pred             cCCCCCccc-CchhHHHHHhhhcC-CCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        243 HPGCGKTYT-KSSHLKAHLRTHTG-EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       243 h~~Cgk~F~-~~s~L~~H~r~Htg-eKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |..|++.|. ....|..|+++|++ +++|.|.+  |++.|.++..|.+|+++|++++|+....
T Consensus        27 C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             CTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             CCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            455999999 99999999999999 99999977  9999999999999999999999975544

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.77  Aligned_cols=44  Identities=36%  Similarity=0.703  Sum_probs=41.0

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999976  9999999999999999999999999985

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.64  Aligned_cols=44  Identities=34%  Similarity=0.606  Sum_probs=40.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=79.51  Aligned_cols=44  Identities=39%  Similarity=0.650  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788899999999966  9999999999999999999999999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=78.99  Aligned_cols=44  Identities=32%  Similarity=0.597  Sum_probs=40.4

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999975

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=79.11  Aligned_cols=43  Identities=40%  Similarity=0.716  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            678899999999966  9999999999999999999999999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=79.32  Aligned_cols=44  Identities=43%  Similarity=0.733  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=78.22  Aligned_cols=43  Identities=35%  Similarity=0.527  Sum_probs=37.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4778889999999966  999999999999999999999999885

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.5e-10  Score=79.18  Aligned_cols=44  Identities=36%  Similarity=0.646  Sum_probs=39.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788899999999966  9999999999999999999999999975

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=79.05  Aligned_cols=44  Identities=39%  Similarity=0.702  Sum_probs=41.1

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=6.3e-10  Score=83.38  Aligned_cols=54  Identities=44%  Similarity=0.785  Sum_probs=49.7

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP  298 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKP  298 (371)
                      |..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|+++..
T Consensus        17 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CSSSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCCC
Confidence            3559999999999999999999999999976  99999999999999999998653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=78.64  Aligned_cols=44  Identities=32%  Similarity=0.542  Sum_probs=40.7

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999985

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.98  E-value=1.4e-10  Score=82.49  Aligned_cols=52  Identities=19%  Similarity=0.240  Sum_probs=44.3

Q ss_pred             CCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCcc
Q psy16849        247 GKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ  300 (371)
Q Consensus       247 gk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPyk  300 (371)
                      ++.|.....|..|+++|+++++|.|..  |++.|.....|.+|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            467788888888888898889999965  9999999999999999998888874

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=1e-09  Score=88.13  Aligned_cols=57  Identities=18%  Similarity=0.334  Sum_probs=50.9

Q ss_pred             ccCCCCCcc-cCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHH-hhhhcCCCCccC
Q psy16849        242 FHPGCGKTY-TKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRH-FRKHTGDRPFQC  301 (371)
Q Consensus       242 ~h~~Cgk~F-~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H-~r~HtgeKPykC  301 (371)
                      .|..|++.| .....|..|+++| ++++|.|.+  |++.|..+..|.+| +++|+++..|.+
T Consensus        36 ~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           36 SCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             ECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCCCCCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            456699999 9999999999999 999999976  99999999999999 999987655544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.97  E-value=2.3e-11  Score=89.48  Aligned_cols=57  Identities=14%  Similarity=0.324  Sum_probs=50.8

Q ss_pred             HHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhh
Q psy16849        256 LKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAAT  319 (371)
Q Consensus       256 L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H  319 (371)
                      |..|+++|++++||.|..  |++.|.....|.   ++|++++||+|.+  |++.|....++..+
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCC--CCCccccCcccccc
Confidence            567899999999999966  999999999887   8999999999999  99999988776544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=77.92  Aligned_cols=43  Identities=35%  Similarity=0.567  Sum_probs=39.2

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4788999999999966  999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=79.52  Aligned_cols=44  Identities=36%  Similarity=0.586  Sum_probs=40.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999976  9999999999999999999999999975

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=77.31  Aligned_cols=41  Identities=39%  Similarity=0.729  Sum_probs=35.1

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      |+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            677888888888865  88888888888888888888888887

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.4e-10  Score=78.18  Aligned_cols=44  Identities=34%  Similarity=0.592  Sum_probs=39.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999966  9999999999999999999999999973

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=77.84  Aligned_cols=43  Identities=35%  Similarity=0.638  Sum_probs=37.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788899999999966  999999999999999999999999885

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=78.88  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=40.5

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999973

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=77.74  Aligned_cols=43  Identities=37%  Similarity=0.681  Sum_probs=38.3

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            677899999999966  9999999999999999999999999974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=5.6e-10  Score=87.48  Aligned_cols=61  Identities=23%  Similarity=0.331  Sum_probs=55.3

Q ss_pred             ccccccCCCCCcccChhHHHHHhhh-hcCCCC--------ccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRK-HTGDRP--------FQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~-HtgeKP--------ykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|.|..  |++.|.....|.+|+++ |.++++        |.|.+  |++.|.+...|++|++.|+++..+.|.
T Consensus        25 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            468965  99999999999999998 999988        99999  999999999999999999988776553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.2e-10  Score=77.54  Aligned_cols=43  Identities=23%  Similarity=0.459  Sum_probs=38.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      +|+++|+++++|.|..  |++.|..+..|.+|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4788899999999966  999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=78.73  Aligned_cols=44  Identities=27%  Similarity=0.603  Sum_probs=40.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|.+...|.+|+++|++++||+|..
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999966  9999999999999999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3e-10  Score=76.11  Aligned_cols=41  Identities=39%  Similarity=0.744  Sum_probs=35.4

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      |+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            677888888899965  99999999999999888888888887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3e-10  Score=77.57  Aligned_cols=43  Identities=40%  Similarity=0.637  Sum_probs=40.1

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      ++++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            357899999999966  9999999999999999999999999998

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.4e-10  Score=76.56  Aligned_cols=43  Identities=19%  Similarity=0.310  Sum_probs=38.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788899999999966  999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.3e-10  Score=76.57  Aligned_cols=41  Identities=37%  Similarity=0.682  Sum_probs=37.9

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            678899999999966  99999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.4e-10  Score=77.96  Aligned_cols=44  Identities=39%  Similarity=0.654  Sum_probs=38.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788899999999966  9999999999999999999999999974

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.1e-10  Score=77.61  Aligned_cols=44  Identities=27%  Similarity=0.314  Sum_probs=39.3

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcC-CCCccCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG-DRPFQCKP  303 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg-eKPykC~~  303 (371)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|++ ++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3788899999999966  99999999999999999999 99999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.93  E-value=3.2e-10  Score=75.67  Aligned_cols=41  Identities=29%  Similarity=0.530  Sum_probs=37.6

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      |+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            678899999999966  99999999999999999999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.5e-10  Score=77.35  Aligned_cols=42  Identities=40%  Similarity=0.677  Sum_probs=39.8

Q ss_pred             HhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        260 LRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       260 ~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999966  9999999999999999999999999998

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.92  E-value=9.6e-10  Score=78.09  Aligned_cols=51  Identities=41%  Similarity=0.825  Sum_probs=46.7

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |..|++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|.+
T Consensus         7 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            7 CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             CTTTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            3459999999999999999999999999966  99999999999999999864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.1e-10  Score=78.42  Aligned_cols=43  Identities=40%  Similarity=0.655  Sum_probs=39.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999966  999999999999999999999999996

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.4e-10  Score=75.70  Aligned_cols=42  Identities=21%  Similarity=0.317  Sum_probs=38.5

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||+|.
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            678899999999966  999999999999999999999999995

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=77.31  Aligned_cols=43  Identities=33%  Similarity=0.441  Sum_probs=39.1

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999966  999999999999999999999999984

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.8e-10  Score=76.57  Aligned_cols=45  Identities=51%  Similarity=1.085  Sum_probs=40.8

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |.++|+++++|.|.++.|++.|..+..|.+|+++|++++||+|.+
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999963259999999999999999999999999998

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=7.3e-10  Score=75.87  Aligned_cols=43  Identities=28%  Similarity=0.490  Sum_probs=39.4

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      ++++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|.+
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            357899999999966  9999999999999999999999999985

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=1.2e-09  Score=81.69  Aligned_cols=54  Identities=46%  Similarity=0.928  Sum_probs=49.1

Q ss_pred             cccccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       239 H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      +.|.+..|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|+
T Consensus        20 ~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             EECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             cCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            45654569999999999999999999999999976  9999999999999999985

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=1.8e-09  Score=77.51  Aligned_cols=53  Identities=42%  Similarity=0.837  Sum_probs=48.1

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHh-hhhcCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHF-RKHTGDR  297 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~-r~HtgeK  297 (371)
                      |..|++.|.....|..|+++|+++++|.|.+  |++.|..+..|.+|+ ++|.++.
T Consensus         5 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CTTTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CCCCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCcC
Confidence            3459999999999999999999999999976  999999999999996 6888753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.6e-10  Score=75.05  Aligned_cols=43  Identities=33%  Similarity=0.506  Sum_probs=37.8

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK  302 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~  302 (371)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4788899999999966  999999999999999999999999874

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.2e-09  Score=75.63  Aligned_cols=43  Identities=28%  Similarity=0.575  Sum_probs=40.0

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNP  308 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~k  308 (371)
                      .|.++++|.|.+  |++.|.....|.+|+++|++++||+|.+  |+|
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            477899999976  9999999999999999999999999999  875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.2e-09  Score=74.31  Aligned_cols=43  Identities=35%  Similarity=0.705  Sum_probs=39.9

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVN  307 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~  307 (371)
                      ..|+++++|.|..  |++.|..+..|.+|+++|+++++|.|.+  ||
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             CCCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CCcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            3689999999966  9999999999999999999999999999  75

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.1e-10  Score=75.44  Aligned_cols=43  Identities=33%  Similarity=0.621  Sum_probs=38.4

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +.++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|.+
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456789999999966  9999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=1.9e-09  Score=72.74  Aligned_cols=41  Identities=20%  Similarity=0.422  Sum_probs=37.7

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      ++|+++++|.|..  |++.|..+..|.+|+++|++++||+|.+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4689999999966  9999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.7e-09  Score=70.96  Aligned_cols=39  Identities=36%  Similarity=0.659  Sum_probs=34.4

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      ++|+++++|.|.+  |++.|.....|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4688899999966  99999999999999999999999988

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.78  E-value=6.6e-10  Score=78.90  Aligned_cols=50  Identities=8%  Similarity=0.158  Sum_probs=46.7

Q ss_pred             CCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        277 GWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       277 gK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      +|.|.....|..|+++|++++||.|.+  |++.|.+...|.+|+++|+++..
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCC
Confidence            578999999999999999999999999  99999999999999999997654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.2e-09  Score=72.38  Aligned_cols=44  Identities=14%  Similarity=0.281  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.4e-09  Score=72.10  Aligned_cols=44  Identities=14%  Similarity=0.276  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766553

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.76  E-value=3.3e-09  Score=72.31  Aligned_cols=44  Identities=7%  Similarity=0.210  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.7e-09  Score=71.94  Aligned_cols=44  Identities=14%  Similarity=0.335  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766553

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=6e-09  Score=78.88  Aligned_cols=58  Identities=24%  Similarity=0.478  Sum_probs=51.7

Q ss_pred             CCCCCcccCchhHHHHHhhhcC---CCccccccCCCCCcccChhHHHHHh-hhhcCCCCccCCC
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTG---EKPYQCKWKGCGWKFARSDELTRHF-RKHTGDRPFQCKP  303 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~Htg---eKpf~C~~~~CgK~F~~ks~L~~H~-r~HtgeKPykC~~  303 (371)
                      ..|++.|.....|..|+++|++   +++|.|.+  |++.|..+..|.+|+ +.|.++++.....
T Consensus        11 ~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A           11 EICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            4599999999999999999996   89999976  999999999999999 6788888876554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.2e-10  Score=84.07  Aligned_cols=51  Identities=18%  Similarity=0.337  Sum_probs=46.0

Q ss_pred             CCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        244 PGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      ..||+.|.....|..       +++|.|..  |++.|.....|.+|+++|+++++|+|.+
T Consensus        22 ~~C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A           22 SKCGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             SSSCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             CcccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            448888888887775       78999976  9999999999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4.8e-09  Score=71.45  Aligned_cols=43  Identities=14%  Similarity=0.295  Sum_probs=39.3

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      |+++|++++||+|.+  |+++|.+...|++|++.|+++..+.|..
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788999999999999  9999999999999999999887766653

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.6e-09  Score=72.19  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4889999999999999  9999999999999999999887766654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.8e-09  Score=72.66  Aligned_cols=44  Identities=14%  Similarity=0.307  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.73  E-value=3.2e-09  Score=72.23  Aligned_cols=44  Identities=11%  Similarity=0.185  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999888766653

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.3e-09  Score=72.18  Aligned_cols=44  Identities=16%  Similarity=0.227  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766543

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.72  E-value=2.6e-09  Score=72.79  Aligned_cols=44  Identities=11%  Similarity=0.256  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766654

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.1e-09  Score=71.03  Aligned_cols=44  Identities=11%  Similarity=0.240  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.++..|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999999  9999999999999999999887766543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5e-09  Score=71.37  Aligned_cols=43  Identities=16%  Similarity=0.329  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.72  E-value=2.8e-09  Score=72.75  Aligned_cols=44  Identities=14%  Similarity=0.341  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5.5e-09  Score=71.28  Aligned_cols=44  Identities=7%  Similarity=0.202  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.++..|.+|++.|.++..+.|..
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            2 SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3788999999999999  9999999999999999999887766653

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.9e-09  Score=71.94  Aligned_cols=44  Identities=14%  Similarity=0.302  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4889999999999999  9999999999999999999887766654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5e-09  Score=71.36  Aligned_cols=43  Identities=12%  Similarity=0.275  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.7e-09  Score=71.93  Aligned_cols=44  Identities=7%  Similarity=0.092  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.2e-09  Score=72.20  Aligned_cols=44  Identities=14%  Similarity=0.289  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.3e-09  Score=70.08  Aligned_cols=41  Identities=10%  Similarity=0.327  Sum_probs=37.2

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.
T Consensus         1 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CCccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCC
Confidence            4789999999999999  9999999999999999999776543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=5e-09  Score=70.43  Aligned_cols=42  Identities=12%  Similarity=0.268  Sum_probs=38.2

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      +|+++|++++||+|.+  |++.|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            5889999999999999  99999999999999999998776554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.8e-09  Score=71.98  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.++..|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8.2e-10  Score=84.78  Aligned_cols=66  Identities=20%  Similarity=0.258  Sum_probs=59.7

Q ss_pred             hhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        254 SHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       254 s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      ..|..|+++|.+++++.|.+  |++.| ....|..|+ .|.+++||.|..  |++.|.+ ..|..|++.|.+.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~-~~~~L~~H~-~~c~~~~~~C~~--C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLEL-SILKLKEHE-DYCGARTELCGN--CGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEE-CHHHHHHHH-HHHHHCEEECSS--SCCEEET-TGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHh-hHHHHHHHH-hHcCCCceEccc--CCCcCcH-HHHHHHHHHccCC
Confidence            46788999999999999977  99999 599999999 899999999999  9999885 9999999987754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=1.1e-08  Score=74.83  Aligned_cols=51  Identities=31%  Similarity=0.554  Sum_probs=46.6

Q ss_pred             cCCCCCcccCchhHHHHHhh-h-cCCCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRT-H-TGEKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~-H-tgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |..|++.|.....|..|++. | .++++|.|.+  |++.|.....|.+|+++|.+
T Consensus        13 C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             CCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            35599999999999999998 7 6899999976  99999999999999999876

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=5.5e-09  Score=71.15  Aligned_cols=43  Identities=12%  Similarity=0.310  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999988766554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.3e-09  Score=72.15  Aligned_cols=44  Identities=18%  Similarity=0.353  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.++..|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766553

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.3e-09  Score=72.30  Aligned_cols=44  Identities=14%  Similarity=0.241  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5e-09  Score=71.38  Aligned_cols=44  Identities=11%  Similarity=0.305  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            4889999999999999  9999999999999999999887766653

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.3e-09  Score=71.72  Aligned_cols=43  Identities=14%  Similarity=0.320  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.++..|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5.8e-09  Score=71.06  Aligned_cols=43  Identities=14%  Similarity=0.293  Sum_probs=38.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4889999999999999  999999999999999999988766553

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.9e-09  Score=71.92  Aligned_cols=44  Identities=14%  Similarity=0.295  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.1e-09  Score=71.94  Aligned_cols=44  Identities=7%  Similarity=0.114  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |++.|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.1e-09  Score=71.81  Aligned_cols=44  Identities=16%  Similarity=0.320  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.70  E-value=4.6e-09  Score=70.05  Aligned_cols=41  Identities=10%  Similarity=0.349  Sum_probs=37.3

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      |+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            678999999999999  99999999999999999998776544

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=5.7e-09  Score=70.98  Aligned_cols=43  Identities=14%  Similarity=0.300  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|+++++|+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=5.7e-09  Score=71.06  Aligned_cols=44  Identities=14%  Similarity=0.280  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999999  9999999999999999999887766653

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.6e-09  Score=71.96  Aligned_cols=44  Identities=14%  Similarity=0.186  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=5.6e-09  Score=69.51  Aligned_cols=41  Identities=12%  Similarity=0.357  Sum_probs=37.0

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      |+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            678999999999999  99999999999999999998766543

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.69  E-value=5.9e-09  Score=70.88  Aligned_cols=44  Identities=18%  Similarity=0.302  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4889999999999999  9999999999999999999887766553

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=9e-09  Score=70.29  Aligned_cols=42  Identities=14%  Similarity=0.310  Sum_probs=38.3

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      |+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            788999999999999  999999999999999999988766554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.1e-09  Score=70.69  Aligned_cols=43  Identities=7%  Similarity=0.213  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999  999999999999999999988776554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.1e-09  Score=71.20  Aligned_cols=44  Identities=9%  Similarity=0.246  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766553

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=8.7e-09  Score=70.15  Aligned_cols=43  Identities=16%  Similarity=0.257  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|+++|++++||+|.+  |++.|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999988776554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.6e-09  Score=70.34  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=38.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      .|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4889999999999999  99999999999999999998766544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.5e-09  Score=71.04  Aligned_cols=43  Identities=12%  Similarity=0.262  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |++.|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5e-09  Score=71.38  Aligned_cols=44  Identities=11%  Similarity=0.346  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|+++++|+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766543

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.3e-09  Score=72.19  Aligned_cols=44  Identities=16%  Similarity=0.288  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-08  Score=69.81  Aligned_cols=42  Identities=14%  Similarity=0.315  Sum_probs=38.3

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      |+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            678999999999999  999999999999999999988776554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.2e-09  Score=72.39  Aligned_cols=44  Identities=11%  Similarity=0.283  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=8.3e-09  Score=68.87  Aligned_cols=39  Identities=10%  Similarity=0.314  Sum_probs=36.0

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQ  329 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~  329 (371)
                      |+++|++++||+|.+  |+++|.+...|++|++.|.++..+
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCC
Confidence            788999999999999  999999999999999999977654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.4e-09  Score=70.61  Aligned_cols=43  Identities=14%  Similarity=0.348  Sum_probs=38.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5889999999999999  999999999999999999987765543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5.6e-09  Score=71.01  Aligned_cols=43  Identities=12%  Similarity=0.311  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.67  E-value=5.1e-09  Score=71.46  Aligned_cols=44  Identities=16%  Similarity=0.291  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.++..|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3789999999999999  9999999999999999999887766543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.1e-08  Score=75.36  Aligned_cols=55  Identities=18%  Similarity=0.445  Sum_probs=48.8

Q ss_pred             ccccccCCCCCcccCchhHHHHHhhhcCCCccccc-cCCCCCcccChhHHHHHhhhhcCCCC
Q psy16849        238 SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCK-WKGCGWKFARSDELTRHFRKHTGDRP  298 (371)
Q Consensus       238 ~H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~-~~~CgK~F~~ks~L~~H~r~HtgeKP  298 (371)
                      .+.|  ..|++.|. ...|..|+++ ++++||.|. .  |++.|..+..|.+|+++|...++
T Consensus        10 ~~~C--~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           10 TQPC--TYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EEEC--SSSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSCC
T ss_pred             Ceec--cccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccCc
Confidence            3455  44999999 9999999999 999999996 5  99999999999999999987765

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.3e-09  Score=70.75  Aligned_cols=43  Identities=14%  Similarity=0.271  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            5889999999999999  999999999999999999988766554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.2e-09  Score=72.38  Aligned_cols=44  Identities=14%  Similarity=0.315  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.2e-09  Score=70.90  Aligned_cols=44  Identities=14%  Similarity=0.289  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4789999999999999  9999999999999999999887766543

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.8e-09  Score=70.67  Aligned_cols=43  Identities=12%  Similarity=0.230  Sum_probs=38.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999988766554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=4.1e-09  Score=71.10  Aligned_cols=43  Identities=12%  Similarity=0.248  Sum_probs=38.8

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      |+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678999999999999  9999999999999999999887766543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.4e-09  Score=70.94  Aligned_cols=43  Identities=12%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.++..|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999987765553

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3e-09  Score=72.52  Aligned_cols=44  Identities=16%  Similarity=0.311  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=5e-09  Score=70.70  Aligned_cols=42  Identities=12%  Similarity=0.282  Sum_probs=38.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            5889999999999999  99999999999999999998766544

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=6.1e-09  Score=70.79  Aligned_cols=43  Identities=14%  Similarity=0.334  Sum_probs=38.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999987766553

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.5e-08  Score=77.42  Aligned_cols=41  Identities=27%  Similarity=0.506  Sum_probs=36.3

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHh-hhhcCCCCccCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHF-RKHTGDRPFQCKP  303 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~-r~HtgeKPykC~~  303 (371)
                      ++|+|||+|.+++|+|+|.++++|.+|+ ++|+++|||-|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            5789999997667999999999999997 6899999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=3.2e-09  Score=72.34  Aligned_cols=44  Identities=11%  Similarity=0.187  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-08  Score=69.65  Aligned_cols=44  Identities=11%  Similarity=0.247  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhcc-CCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAK-CPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k-~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++ .|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            4789999999999999  9999999999999999 999887766543

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.65  E-value=6.8e-09  Score=70.81  Aligned_cols=44  Identities=11%  Similarity=0.199  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |++.|.++..|.+|++.|.++..+.|..
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788999999999999  9999999999999999999887766543

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=4.7e-09  Score=71.52  Aligned_cols=44  Identities=9%  Similarity=0.250  Sum_probs=39.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.4e-09  Score=70.26  Aligned_cols=42  Identities=12%  Similarity=0.364  Sum_probs=38.2

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            5889999999999999  99999999999999999998766544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9e-09  Score=70.17  Aligned_cols=42  Identities=14%  Similarity=0.282  Sum_probs=38.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      .|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3788999999999999  99999999999999999998776554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=4.2e-09  Score=71.76  Aligned_cols=44  Identities=9%  Similarity=0.285  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|+++++|+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766653

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=3.9e-09  Score=72.02  Aligned_cols=43  Identities=12%  Similarity=0.278  Sum_probs=39.2

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=3.7e-09  Score=72.18  Aligned_cols=44  Identities=16%  Similarity=0.241  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766543

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=9.1e-09  Score=69.36  Aligned_cols=42  Identities=12%  Similarity=0.179  Sum_probs=38.2

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            5889999999999999  99999999999999999998776544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=5.5e-09  Score=71.02  Aligned_cols=43  Identities=16%  Similarity=0.323  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.63  E-value=3.5e-08  Score=74.51  Aligned_cols=54  Identities=30%  Similarity=0.535  Sum_probs=46.2

Q ss_pred             cCCCCCcccCchhHHHHHh-hhcCC-CccccccCCCCCcccChhHHHHHhhhhc-CCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLR-THTGE-KPYQCKWKGCGWKFARSDELTRHFRKHT-GDRP  298 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r-~Htge-Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht-geKP  298 (371)
                      |..|++.|.....|..|++ .|.++ ++|.|.+  |++.|..+..|.+|++.|. ++.|
T Consensus        18 C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            3459999999999999997 68775 8999966  9999999999999999754 4555

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6.8e-09  Score=70.91  Aligned_cols=43  Identities=9%  Similarity=0.264  Sum_probs=38.9

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      |+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788999999999999  9999999999999999999887766543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=8.2e-09  Score=70.28  Aligned_cols=44  Identities=11%  Similarity=0.274  Sum_probs=39.3

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            3788999999999999  9999999999999999999887766543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.62  E-value=5.2e-09  Score=71.39  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=38.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999987766553

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=1.6e-09  Score=85.93  Aligned_cols=59  Identities=25%  Similarity=0.374  Sum_probs=51.4

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |.++|+++++|.|.+  |++.|.....|.+|+++|++++||+|..  |    .+...|..|.+.|.+
T Consensus        16 ~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKR--Q----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCC--C----SCCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccch--h----hhHHHHHhhhccccc
Confidence            456799999999966  9999999999999999999999999987  4    456777888888775

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=4.2e-09  Score=71.84  Aligned_cols=43  Identities=14%  Similarity=0.246  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999988766554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=5.9e-09  Score=70.99  Aligned_cols=43  Identities=19%  Similarity=0.352  Sum_probs=39.1

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999988776554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=8.8e-09  Score=70.24  Aligned_cols=43  Identities=9%  Similarity=0.247  Sum_probs=38.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999  999999999999999999988776554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.3e-08  Score=69.41  Aligned_cols=42  Identities=14%  Similarity=0.190  Sum_probs=38.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC-CCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA-DTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~-~c~~~f  331 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.+ +..+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            3789999999999999  99999999999999999998 766554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=8.4e-09  Score=70.22  Aligned_cols=44  Identities=7%  Similarity=0.030  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      .|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788999999999999  9999999999999999999887766543

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=5.3e-09  Score=71.24  Aligned_cols=44  Identities=11%  Similarity=0.296  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            5889999999999999  9999999999999999999887766543

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=8.1e-09  Score=70.42  Aligned_cols=43  Identities=16%  Similarity=0.312  Sum_probs=38.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|+++|++++||+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999  999999999999999999987766553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=6.4e-09  Score=70.94  Aligned_cols=43  Identities=21%  Similarity=0.337  Sum_probs=38.8

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999  999999999999999999987766554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.58  E-value=1.1e-08  Score=68.04  Aligned_cols=40  Identities=18%  Similarity=0.306  Sum_probs=36.5

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      |+++|++++||+|.+  |+++|.+...|++|++.|.++..+.
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCC
Confidence            678999999999999  9999999999999999999876543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.1e-08  Score=69.70  Aligned_cols=43  Identities=16%  Similarity=0.376  Sum_probs=39.0

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      .|+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999  999999999999999999988776654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.58  E-value=1.8e-08  Score=65.06  Aligned_cols=35  Identities=31%  Similarity=0.424  Sum_probs=22.1

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |+++|++++||+|.+  |+++|.+...|.+|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhcc
Confidence            555666666666666  66666666666666666553

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=7.2e-09  Score=69.06  Aligned_cols=40  Identities=13%  Similarity=0.299  Sum_probs=36.5

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      |+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCC
Confidence            788999999999999  9999999999999999998776543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=5.1e-09  Score=71.33  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=38.7

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999  999999999999999999877765553

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.5e-08  Score=68.49  Aligned_cols=41  Identities=10%  Similarity=0.229  Sum_probs=37.3

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      .|+++|++++||+|.+  |++.|.+...|.+|++.|.++..+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCC
Confidence            4889999999999999  9999999999999999999776543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=3.3e-08  Score=64.88  Aligned_cols=37  Identities=24%  Similarity=0.483  Sum_probs=29.8

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      |+++++|.|.+  |++.|.....|..|+++|++++||.|
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            56788888865  88888888888888888888888876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=9.6e-09  Score=70.03  Aligned_cols=43  Identities=14%  Similarity=0.284  Sum_probs=39.0

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      |+++|+++++|+|.+  |+++|.+...|++|++.|.++..+.|..
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            788999999999999  9999999999999999999887766653

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1e-08  Score=69.62  Aligned_cols=42  Identities=12%  Similarity=0.304  Sum_probs=38.3

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      .|+++|++++||+|.+  |++.|.+...|++|++.|.++..+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            4889999999999999  99999999999999999998776554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=8.2e-09  Score=69.61  Aligned_cols=42  Identities=10%  Similarity=0.136  Sum_probs=37.9

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      +|+++|++++||+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            5889999999999999  99999999999999999998766543

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.1e-08  Score=67.62  Aligned_cols=41  Identities=5%  Similarity=0.067  Sum_probs=37.4

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      |+++|+++++|+|.+  |+++|.+...|.+|++.|.++..+.|
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            778999999999999  99999999999999999998776554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.52  E-value=8e-08  Score=79.48  Aligned_cols=50  Identities=28%  Similarity=0.440  Sum_probs=46.7

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |..||+.|.....|..|+++|  +++|.|.+  |++.|..+..|.+|+++|+|.
T Consensus        77 C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           77 CPLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CTTTCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            455999999999999999999  89999976  999999999999999999885

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=5e-08  Score=63.44  Aligned_cols=38  Identities=34%  Similarity=0.678  Sum_probs=31.0

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCcc
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQ  300 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPyk  300 (371)
                      |+++++|.|.++.|++.|.++..|.+|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            56788899863359999999999999988888888873

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.1e-08  Score=66.72  Aligned_cols=42  Identities=17%  Similarity=0.381  Sum_probs=37.5

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      ++++|+++++|+|.+  |++.|.+...|++|++.|.++..+.|.
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            357899999999999  999999999999999999988776654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=4.5e-08  Score=63.16  Aligned_cols=36  Identities=14%  Similarity=0.432  Sum_probs=22.4

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP  298 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKP  298 (371)
                      ++|+++++|.|.+  |++.|..+..|.+|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            4566666666644  66666666666666666666554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.3e-08  Score=66.38  Aligned_cols=41  Identities=22%  Similarity=0.438  Sum_probs=36.6

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      +.++|+++++|+|.+  |++.|.+...|.+|++.|.++..+.|
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            3 SGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCC
Confidence            456899999999999  99999999999999999998776554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.45  E-value=9e-08  Score=61.70  Aligned_cols=36  Identities=42%  Similarity=0.662  Sum_probs=33.6

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |+++|++++||.|..  |++.|..+..|.+|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            788999999999966  999999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=6.8e-08  Score=65.97  Aligned_cols=45  Identities=16%  Similarity=0.191  Sum_probs=38.1

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      |.++|++++||+|.+..|++.|.+...|.+|++.|.++..+.|..
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999982229999999999999999999887766543

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=5.5e-08  Score=66.29  Aligned_cols=42  Identities=7%  Similarity=0.150  Sum_probs=37.2

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFK  332 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk  332 (371)
                      ++++|+++++|+|.+  |++.|.+...|++|++.|.++..+.|.
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            357899999999999  999999999999999999987766553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=8.9e-08  Score=63.37  Aligned_cols=38  Identities=13%  Similarity=0.365  Sum_probs=34.3

Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCC
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQP  330 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~  330 (371)
                      ++|++++||+|.+  |+++|.+...|++|++.|.++..+.
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            4799999999999  9999999999999999999876543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=5.2e-08  Score=66.30  Aligned_cols=42  Identities=14%  Similarity=0.234  Sum_probs=37.4

Q ss_pred             hhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCc
Q psy16849        290 FRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKT  333 (371)
Q Consensus       290 ~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~  333 (371)
                      +++|+++++|+|.+  |+++|.+...|++|++.|+++..+.|..
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56899999999999  9999999999999999999877766543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=5e-08  Score=67.21  Aligned_cols=40  Identities=25%  Similarity=0.575  Sum_probs=24.6

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      .|+..|+++++|.|.++.|++.|.++..|.+|+++|+|+|
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445566666666643346666666666666666666653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.39  E-value=1.7e-07  Score=59.34  Aligned_cols=34  Identities=32%  Similarity=0.545  Sum_probs=21.0

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP  298 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKP  298 (371)
                      |+++++|.|.+  |++.|.++..|.+|+++|++++|
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            55666666644  66666666666666666666553

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=6e-08  Score=62.54  Aligned_cols=36  Identities=14%  Similarity=0.259  Sum_probs=32.8

Q ss_pred             hhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        290 FRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       290 ~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +++|++++||+|.+  |+++|.+...|.+|++.|+++.
T Consensus         1 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            1 GSSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            35799999999999  9999999999999999998654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=1e-07  Score=64.46  Aligned_cols=42  Identities=10%  Similarity=0.279  Sum_probs=37.9

Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCcc
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTW  334 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~  334 (371)
                      .+|++++||+|.+  |+++|.++..|.+|++.|.++..+.|..+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            3689999999999  99999999999999999998888776654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.37  E-value=2.1e-07  Score=59.20  Aligned_cols=34  Identities=26%  Similarity=0.652  Sum_probs=18.8

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRP  298 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKP  298 (371)
                      |+++++|.|.+  |++.|.....|.+|+++|++++|
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            45555555543  55555555555555555555543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.3e-07  Score=62.15  Aligned_cols=34  Identities=21%  Similarity=0.401  Sum_probs=20.5

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +++++||+|.+++|++.|.++..|.+|+++|+|+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4556666664334666666666666666666654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.35  E-value=1.4e-07  Score=63.35  Aligned_cols=39  Identities=21%  Similarity=0.325  Sum_probs=35.4

Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      ++|+++++|+|.+  |++.|.+...|.+|++.|.++..+.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccC
Confidence            5799999999999  99999999999999999998776654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1e-07  Score=63.96  Aligned_cols=35  Identities=17%  Similarity=0.146  Sum_probs=31.4

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      .++++|||+|.+.+|+++|.++..|++|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            47899999998767999999999999999999854

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.33  E-value=1.8e-07  Score=59.45  Aligned_cols=34  Identities=21%  Similarity=0.371  Sum_probs=31.3

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +|++++||+|.+  |++.|.+...|.+|++.|+++.
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCC
Confidence            488999999999  9999999999999999998654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=3.4e-07  Score=69.90  Aligned_cols=43  Identities=12%  Similarity=0.111  Sum_probs=37.7

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhc-cCCCCCCCCCCCcc
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATA-KCPSADTSQPFKTW  334 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~-k~h~~~c~~~fk~~  334 (371)
                      .++|+|||+|.+.+|+|+|.+.++|++|+ ++|.+++++.+...
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            46899999998777999999999999998 68999998877654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.30  E-value=1.8e-07  Score=59.28  Aligned_cols=34  Identities=9%  Similarity=0.137  Sum_probs=31.2

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +|++++||+|.+  |+++|.+...|.+|++.|+++.
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            488999999999  9999999999999999998653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.30  E-value=4.2e-07  Score=57.60  Aligned_cols=33  Identities=27%  Similarity=0.410  Sum_probs=27.3

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCCCccC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQC  301 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC  301 (371)
                      +||.|..  |++.|.....|..|+++|+|++||.+
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            5788865  88888888888888888888888864

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.25  E-value=4.9e-07  Score=58.61  Aligned_cols=35  Identities=34%  Similarity=0.702  Sum_probs=24.0

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |+++++|.|.++.|++.|..+..|.+|+++|+|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56677777753347777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.23  E-value=8.4e-08  Score=66.03  Aligned_cols=41  Identities=15%  Similarity=0.233  Sum_probs=34.5

Q ss_pred             HHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        286 LTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       286 L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +..|...|++++||+|.+..|+++|.+...|++|++.|.++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34556679999999997334999999999999999999865

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.23  E-value=5.1e-07  Score=59.06  Aligned_cols=35  Identities=11%  Similarity=0.260  Sum_probs=31.3

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQ  329 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~  329 (371)
                      |++++||+|.+  |++.|.+...|.+|++.|.++..+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCccc
Confidence            67899999999  999999999999999999977653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=4.1e-07  Score=58.25  Aligned_cols=31  Identities=10%  Similarity=0.129  Sum_probs=17.6

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      .|++++||+|.+  |++.|.+...|.+|++.|.
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHHhc
Confidence            345555555555  5555555555555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=1.1e-06  Score=62.11  Aligned_cols=37  Identities=30%  Similarity=0.670  Sum_probs=33.9

Q ss_pred             CCCCCcccCchhHHHHHh-hhcCCCccccccCCCCCcccC
Q psy16849        244 PGCGKTYTKSSHLKAHLR-THTGEKPYQCKWKGCGWKFAR  282 (371)
Q Consensus       244 ~~Cgk~F~~~s~L~~H~r-~HtgeKpf~C~~~~CgK~F~~  282 (371)
                      ..|++.|.....|..|++ +|+++++|.|.+  |++.|.+
T Consensus        16 ~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A           16 QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             SSSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            449999999999999997 999999999976  9999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=1.9e-07  Score=60.68  Aligned_cols=32  Identities=25%  Similarity=0.550  Sum_probs=15.6

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHH-hhhhcC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRH-FRKHTG  295 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H-~r~Htg  295 (371)
                      +|++++||.|..  |++.|..+..|.+| +++|++
T Consensus         3 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            444555555533  55555555555555 444443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=6.3e-07  Score=61.53  Aligned_cols=42  Identities=7%  Similarity=0.057  Sum_probs=38.0

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCccc
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWA  335 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~~  335 (371)
                      .|.++++|+|.+  |++.|.+...|.+|++.|.++..+.|..|+
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            478899999999  999999999999999999998888777665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=3.9e-07  Score=58.35  Aligned_cols=30  Identities=20%  Similarity=0.399  Sum_probs=14.7

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |++++||+|.+  |++.|.+...|.+|++.|.
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            4 GSSGKPFKCSL--CEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SCCCCSEECSS--SSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCccCCC--CCchhCCHHHHHHHHHHhc
Confidence            44444555544  4455555555555544444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=5.8e-07  Score=57.86  Aligned_cols=33  Identities=24%  Similarity=0.707  Sum_probs=19.6

Q ss_pred             hhcCCCccccccCCCCCcccCh-hHHHHHhhhhcCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARS-DELTRHFRKHTGD  296 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~k-s~L~~H~r~Htge  296 (371)
                      +|+++++|.|..  |++.|... ..|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            455566666644  66666665 6666666666554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=7.5e-07  Score=56.98  Aligned_cols=35  Identities=23%  Similarity=0.418  Sum_probs=31.8

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +.|+++++|.|.+  |++.|..+..|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCCC
Confidence            3588999999966  9999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=9.1e-07  Score=56.36  Aligned_cols=33  Identities=39%  Similarity=0.800  Sum_probs=19.2

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +|+++++|.|.+  |++.|.....|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            355556666644  666666666666666666554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=8.7e-07  Score=56.67  Aligned_cols=35  Identities=20%  Similarity=0.649  Sum_probs=31.8

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +.|+++++|.|.+  |++.|.....|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            3688999999966  9999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=2.9e-07  Score=59.37  Aligned_cols=34  Identities=12%  Similarity=0.146  Sum_probs=31.2

Q ss_pred             hhhcCCCCccCCCCCCCCCCCCc-HHHHhhccCCCCC
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEG-KDLAATAKCPSAD  326 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~-~~L~~H~k~h~~~  326 (371)
                      ++|++++||+|.+  |++.|.+. ..|.+|++.|.++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            4789999999999  99999999 9999999998754

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.16  E-value=6e-07  Score=62.12  Aligned_cols=31  Identities=19%  Similarity=0.319  Sum_probs=19.7

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhcc-CCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAK-CPSA  325 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k-~h~~  325 (371)
                      |++++||+|.+  |+++|.....|.+|++ .|.+
T Consensus         2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence            56666666666  6666666666666666 5554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=4.6e-07  Score=57.76  Aligned_cols=33  Identities=9%  Similarity=0.292  Sum_probs=30.8

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +|++++||+|.+  |++.|.....|.+|++.|.++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            589999999999  999999999999999998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.2e-07  Score=57.82  Aligned_cols=34  Identities=12%  Similarity=0.028  Sum_probs=31.0

Q ss_pred             hhhhcCCCCccCCCCCCCCCCCCcHHHHhh-ccCCCC
Q psy16849        290 FRKHTGDRPFQCKPNLVNPSIKEGKDLAAT-AKCPSA  325 (371)
Q Consensus       290 ~r~HtgeKPykC~~~~C~ksF~~~~~L~~H-~k~h~~  325 (371)
                      +++|++++||+|.+  |+++|.++..|++| ++.|.+
T Consensus         1 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            1 GSSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CCSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             CCccCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            35799999999999  99999999999999 888874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.9e-07  Score=56.66  Aligned_cols=32  Identities=34%  Similarity=0.527  Sum_probs=15.9

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |+++++|.|..  |++.|..+..|.+|+++|+++
T Consensus         4 h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            44455555533  555555555555555555444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.5e-06  Score=55.30  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=30.6

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      .|+++++|+|.+  |++.|.+...|.+|++.|.++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            588999999999  999999999999999999865

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=5.9e-07  Score=58.19  Aligned_cols=36  Identities=17%  Similarity=0.281  Sum_probs=31.6

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      |++++||+|.+..|+++|.+...|++|++.|.++..
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            678999999944499999999999999999987654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.09  E-value=5.9e-07  Score=58.24  Aligned_cols=35  Identities=9%  Similarity=0.109  Sum_probs=30.9

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      .|++++||+|.+..|+++|.+...|++|++.|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            37899999999545999999999999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.07  E-value=1.6e-06  Score=59.95  Aligned_cols=35  Identities=26%  Similarity=0.689  Sum_probs=29.7

Q ss_pred             hhcCCCccccccCCCCCcccChhHHHHHhh-hhcCCCC
Q psy16849        262 THTGEKPYQCKWKGCGWKFARSDELTRHFR-KHTGDRP  298 (371)
Q Consensus       262 ~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r-~HtgeKP  298 (371)
                      +|+++++|.|.+  |++.|..+..|.+|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCCC
Confidence            589999999976  9999999999999999 9998754

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=2.3e-06  Score=54.66  Aligned_cols=32  Identities=28%  Similarity=0.611  Sum_probs=19.0

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |.++++|.|.+  |++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            45556666644  666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=1.4e-06  Score=55.62  Aligned_cols=33  Identities=18%  Similarity=0.294  Sum_probs=30.4

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      .|.+++||+|.+  |++.|.....|.+|++.|.++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            478899999999  999999999999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.99  E-value=4.4e-06  Score=51.43  Aligned_cols=19  Identities=5%  Similarity=0.174  Sum_probs=9.7

Q ss_pred             CCCCCCCcHHHHhhccCCC
Q psy16849        306 VNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       306 C~ksF~~~~~L~~H~k~h~  324 (371)
                      |+++|.+...|.+|++.|.
T Consensus        10 C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A           10 CGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTS
T ss_pred             CCcccCCHhHHHHHHHHhc
Confidence            5555555555555555444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.96  E-value=6.7e-07  Score=56.15  Aligned_cols=31  Identities=26%  Similarity=0.488  Sum_probs=18.8

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCCCc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF  299 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPy  299 (371)
                      +||.|..  |++.|..+..|.+|+++|++++||
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            3566644  666666666666666666666655

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.95  E-value=1e-05  Score=60.25  Aligned_cols=54  Identities=20%  Similarity=0.583  Sum_probs=37.2

Q ss_pred             ccccCCCCCcccCchhHHHHH-hhhcCCC------ccccccCCCCCcccChhHHHHHhhhh
Q psy16849        240 ACFHPGCGKTYTKSSHLKAHL-RTHTGEK------PYQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       240 ~c~h~~Cgk~F~~~s~L~~H~-r~HtgeK------pf~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      .|.|.+|++.|.....|..|+ +.|.+.+      +|.|.|.+|++.+.....|.+|+++.
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            466667777777777777776 3666554      67777777777777777777777643

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.95  E-value=4.3e-07  Score=66.31  Aligned_cols=51  Identities=12%  Similarity=0.090  Sum_probs=42.6

Q ss_pred             HHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCCCccccccccc
Q psy16849        286 LTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPFKTWATVVSTY  341 (371)
Q Consensus       286 L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~fk~~~~l~~h~  341 (371)
                      |..|+++|+|++||+|.+  |+++|.....|.   +.|.++..+.|..|+..+...
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            457899999999999999  999999999997   678887777777777666543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=6.6e-06  Score=50.88  Aligned_cols=30  Identities=37%  Similarity=0.870  Sum_probs=13.5

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +||.|.++.|++.|.....|.+|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            344443112555555555555554444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=9.7e-06  Score=50.09  Aligned_cols=31  Identities=23%  Similarity=0.440  Sum_probs=26.0

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      ++||+|.+..|+++|.+...|.+|++.|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            5789999222999999999999999998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.87  E-value=4.8e-06  Score=55.08  Aligned_cols=32  Identities=22%  Similarity=0.500  Sum_probs=20.0

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      +.++|||.|..  |+|+|.++++|.+|+       ||+|..
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC-------CeECcC
Confidence            34666666643  666666666666666       566654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.86  E-value=5.4e-06  Score=52.31  Aligned_cols=31  Identities=10%  Similarity=0.124  Sum_probs=28.1

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQ  329 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~  329 (371)
                      +||+|.+  |+++|.+...|..|++.|.++..+
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            6899999  999999999999999999977653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.85  E-value=8.8e-06  Score=50.00  Aligned_cols=31  Identities=55%  Similarity=1.215  Sum_probs=27.3

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +||.|.++.|++.|.....|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            5899963359999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.83  E-value=6.7e-06  Score=49.16  Aligned_cols=27  Identities=11%  Similarity=0.331  Sum_probs=17.9

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ++||+|.+  |+++|.+...|.+|++.|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            35666766  6677777777777766654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.83  E-value=6.7e-06  Score=49.44  Aligned_cols=26  Identities=15%  Similarity=0.344  Sum_probs=12.9

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      +||+|.+  |+++|.....|.+|++.|.
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHTTC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHHhc
Confidence            4455555  5555555555555554444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.82  E-value=4.9e-06  Score=49.79  Aligned_cols=26  Identities=12%  Similarity=0.267  Sum_probs=18.1

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ++||+|.+  |+++|.+...|.+|++.|
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            35677777  777777777777777665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=1.2e-05  Score=48.32  Aligned_cols=30  Identities=40%  Similarity=0.924  Sum_probs=26.8

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +++|.|..  |++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            47899966  9999999999999999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=7.2e-07  Score=70.49  Aligned_cols=41  Identities=10%  Similarity=0.220  Sum_probs=35.1

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCCCCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADTSQPF  331 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~~~f  331 (371)
                      |.++|++++||+|.+  |++.|.+...|.+|+++|.++..+.|
T Consensus        16 ~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            456799999999999  99999999999999999987644333

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.77  E-value=2.5e-05  Score=58.55  Aligned_cols=38  Identities=21%  Similarity=0.313  Sum_probs=25.7

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |.++|||+|..  |+|.|.++..|.+|+++|++++ ..|.+
T Consensus         8 ~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~-~~~~~   45 (66)
T 2epp_A            8 LREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS-LQLGY   45 (66)
T ss_dssp             CCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS-CCCCS
T ss_pred             CCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc-ccccc
Confidence            55677777754  7777777777777777777653 34555

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.77  E-value=8e-06  Score=61.33  Aligned_cols=33  Identities=6%  Similarity=0.054  Sum_probs=30.6

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      .|.++|||+|.+  |+|+|.++..|++|+++|+++
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCC
Confidence            478899999999  999999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.76  E-value=1.7e-05  Score=59.04  Aligned_cols=56  Identities=20%  Similarity=0.418  Sum_probs=50.1

Q ss_pred             cccccCCCCCcccChhHHHHHh-hhhcCCC------CccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        269 YQCKWKGCGWKFARSDELTRHF-RKHTGDR------PFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~-r~HtgeK------PykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      +.|.|.+|++.|.....|..|+ +.|.+.+      +|.|.=.+|++.++....|.+|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            6799999999999999999998 5898766      899997789999999999999998653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.75  E-value=1.5e-05  Score=47.79  Aligned_cols=27  Identities=37%  Similarity=0.644  Sum_probs=14.0

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      ||.|..  |++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            455533  555555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.75  E-value=6.5e-06  Score=48.96  Aligned_cols=25  Identities=12%  Similarity=0.352  Sum_probs=14.5

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      +||+|.+  |+++|.....|.+|++.|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHc
Confidence            4555655  556666666666555544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.74  E-value=3.4e-06  Score=52.82  Aligned_cols=30  Identities=13%  Similarity=0.186  Sum_probs=27.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSADTS  328 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c~  328 (371)
                      +||+|.+  |+++|.+...|.+|++.|.++..
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCC
Confidence            6899999  99999999999999999987654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.74  E-value=2e-05  Score=47.12  Aligned_cols=27  Identities=41%  Similarity=0.940  Sum_probs=14.0

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +|.|..  |++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            455533  555555555555555555544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.73  E-value=1e-05  Score=48.37  Aligned_cols=28  Identities=14%  Similarity=0.357  Sum_probs=25.8

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +||+|.+  |+++|.+...|.+|++.|.++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            5899999  999999999999999998754

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.73  E-value=9.3e-06  Score=48.70  Aligned_cols=28  Identities=11%  Similarity=0.150  Sum_probs=25.9

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +||.|.+  |++.|.+...|..|++.|.++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            6899999  999999999999999998754

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.73  E-value=9e-06  Score=53.73  Aligned_cols=26  Identities=19%  Similarity=0.272  Sum_probs=25.0

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhc
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATA  320 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~  320 (371)
                      +.|+|||+|.+  |+|+|.++++|++|+
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC
Confidence            57899999999  999999999999998

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.89  E-value=5e-06  Score=50.25  Aligned_cols=27  Identities=11%  Similarity=0.347  Sum_probs=17.6

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      +||+|.+  |++.|.....|.+|++.|++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVRIHTG   28 (30)
Confidence            5666666  66666666666666666653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.70  E-value=1.9e-05  Score=46.59  Aligned_cols=25  Identities=16%  Similarity=0.339  Sum_probs=15.5

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ||+|.+  |+++|.+...|.+|++.|.
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcC
Confidence            456666  6666666666666666655

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.70  E-value=2.4e-05  Score=46.88  Aligned_cols=28  Identities=29%  Similarity=0.749  Sum_probs=14.5

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +|.|..  |++.|.....|..|+++|++++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            455533  5555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=2e-05  Score=46.99  Aligned_cols=29  Identities=41%  Similarity=0.959  Sum_probs=19.4

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      ++|.|..  |++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            4567744  7777777777777777776653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.84  E-value=6.2e-06  Score=49.70  Aligned_cols=27  Identities=19%  Similarity=0.384  Sum_probs=17.0

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      +||+|.+  |+++|.....|.+|++.|++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            3566666  66666666666666666653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.66  E-value=2.4e-05  Score=46.50  Aligned_cols=28  Identities=32%  Similarity=0.647  Sum_probs=16.5

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +||.|..  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            3556643  666666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.64  E-value=1.8e-05  Score=47.48  Aligned_cols=29  Identities=14%  Similarity=0.313  Sum_probs=26.3

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +||+|.+  |++.|.....|.+|++.|+++.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            5899999  9999999999999999998653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.80  E-value=7.2e-06  Score=48.31  Aligned_cols=25  Identities=16%  Similarity=0.441  Sum_probs=19.1

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      |||+|.+  |+++|.+...|.+|++.|
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777  778888888888777766

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.61  E-value=4.2e-05  Score=46.06  Aligned_cols=27  Identities=19%  Similarity=0.283  Sum_probs=17.0

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhh-ccCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAAT-AKCPSA  325 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H-~k~h~~  325 (371)
                      +||+|..  |++.|.+...|.+| ++.|.+
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccC
Confidence            3566666  66666666666666 555554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.76  E-value=8.9e-06  Score=49.09  Aligned_cols=30  Identities=47%  Similarity=0.906  Sum_probs=26.4

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      ++||.|..  |++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIH--CQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            47899966  9999999999999999998864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.59  E-value=3.4e-05  Score=45.90  Aligned_cols=28  Identities=39%  Similarity=0.980  Sum_probs=24.9

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      +++|.|..  |++.|.....|..|+++|+|
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHhcCC
Confidence            47899966  99999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.72  E-value=1e-05  Score=48.72  Aligned_cols=29  Identities=45%  Similarity=0.948  Sum_probs=25.4

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +||.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            5789966  9999999999999999998864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.7e-05  Score=47.19  Aligned_cols=28  Identities=21%  Similarity=0.325  Sum_probs=25.7

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +||+|.+  |+++|.....|..|++.|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            6899999  999999999999999988754

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.56  E-value=2.1e-05  Score=59.87  Aligned_cols=50  Identities=20%  Similarity=0.298  Sum_probs=43.6

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |..|++.| ....|..|+ .|.+++++.|..  |++.|. ...|..|+++|.+++
T Consensus        20 C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           20 CQHCDLEL-SILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSSSCCEE-CHHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CcccChHh-hHHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            34499999 499999999 999999999966  999987 599999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.51  E-value=5.6e-05  Score=45.48  Aligned_cols=29  Identities=41%  Similarity=0.815  Sum_probs=25.2

Q ss_pred             CccccccCCCCCcccChhHHHHH-hhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRH-FRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H-~r~HtgeK  297 (371)
                      +||.|..  |++.|.....|..| +++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccCCC
Confidence            5799965  99999999999999 78998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.50  E-value=6e-05  Score=44.28  Aligned_cols=27  Identities=33%  Similarity=0.753  Sum_probs=22.3

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      ||.|..  |++.|..+..|.+|+++|+++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCCC
Confidence            588965  999999999999999999864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.49  E-value=5e-05  Score=44.93  Aligned_cols=27  Identities=33%  Similarity=0.743  Sum_probs=24.0

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      ++||.|..  |++.|.....|..|+++|+
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHHHcc
Confidence            57899966  9999999999999999885

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=1.7e-05  Score=47.26  Aligned_cols=28  Identities=14%  Similarity=0.402  Sum_probs=25.7

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +||+|.+  |++.|.....|..|++.|.++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            5899999  999999999999999998754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.47  E-value=4.2e-05  Score=45.53  Aligned_cols=27  Identities=26%  Similarity=0.624  Sum_probs=24.0

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      ++||.|..  |++.|..+..|.+|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhcC
Confidence            47899966  9999999999999999884

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.41  E-value=3.7e-05  Score=45.87  Aligned_cols=24  Identities=17%  Similarity=0.346  Sum_probs=12.3

Q ss_pred             CccCC--CCCCCCCCCCcHHHHhhccCC
Q psy16849        298 PFQCK--PNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       298 PykC~--~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ||+|.  .  |++.|.....|.+|++.|
T Consensus         2 ~~~C~~~~--C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFEN--CGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTT--TCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCc--CcCccCCHHHHHHHHHHh
Confidence            44555  4  555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.21  E-value=0.00015  Score=43.10  Aligned_cols=29  Identities=38%  Similarity=0.824  Sum_probs=23.2

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      ++|.|.++.|++.|.....|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            47889622599999999999999998874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.23  E-value=6.3e-05  Score=44.06  Aligned_cols=26  Identities=46%  Similarity=1.047  Sum_probs=22.6

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      +||.|..  |++.|.....|..|+++|+
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHHD   26 (26)
Confidence            5799966  9999999999999998874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.41  E-value=0.0038  Score=52.48  Aligned_cols=33  Identities=9%  Similarity=0.136  Sum_probs=28.7

Q ss_pred             hhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        290 FRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       290 ~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      -..|+|++||.|..  |++.|.+...|..|++...
T Consensus        42 ded~tGekpfyC~~--C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           42 DPDLPGGGLHRCLA--CARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             CSSSGGGGCSEETT--TTEECSSHHHHHHHTTCHH
T ss_pred             cccCCCCcceEccc--CcchhCCHHHHHHHHhhhh
Confidence            34688999999999  9999999999999998643

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=92.83  E-value=0.07  Score=44.57  Aligned_cols=75  Identities=17%  Similarity=0.108  Sum_probs=50.0

Q ss_pred             ccCCCCCcccCchhHHHHH--hhhcCC-Ccccccc----CCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcH
Q psy16849        242 FHPGCGKTYTKSSHLKAHL--RTHTGE-KPYQCKW----KGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGK  314 (371)
Q Consensus       242 ~h~~Cgk~F~~~s~L~~H~--r~Htge-Kpf~C~~----~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~  314 (371)
                      .|..|...|.....+..|.  +.|... +.+.+..    +.=++.+....    +...+.+.+.|-|.+  |+++|.+..
T Consensus        34 ~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~--C~~~f~s~~  107 (127)
T 1zu1_A           34 QCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV--CNMTFSSPV  107 (127)
T ss_dssp             EETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT--TTEECSSHH
T ss_pred             cCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC--CCCEeCCHH
Confidence            3556999999999999998  466532 3344311    00022332211    233466778899999  999999999


Q ss_pred             HHHhhccC
Q psy16849        315 DLAATAKC  322 (371)
Q Consensus       315 ~L~~H~k~  322 (371)
                      .|..|+..
T Consensus       108 ~~~~H~~g  115 (127)
T 1zu1_A          108 VAESHYIG  115 (127)
T ss_dssp             HHHHHHTS
T ss_pred             HHHHHHCC
Confidence            99999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=92.73  E-value=0.029  Score=47.07  Aligned_cols=32  Identities=28%  Similarity=0.415  Sum_probs=28.0

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhh
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRK  292 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~  292 (371)
                      +...|+|+++|.|..  |++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            345688999999966  99999999999999884

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.36  E-value=0.32  Score=41.93  Aligned_cols=79  Identities=20%  Similarity=0.319  Sum_probs=57.3

Q ss_pred             cccCCCCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhc
Q psy16849        241 CFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATA  320 (371)
Q Consensus       241 c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~  320 (371)
                      |...+|+.... ...|..|.. .-.-++..|  ++|+..+ .+..|..|....-..++-.|.+  |+..| ....|..|.
T Consensus        85 C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C--~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~--C~~~~-~~~~l~~H~  156 (170)
T 3hcs_A           85 CPNEGCLHKME-LRHLEDHQA-HCEFALMDC--PQCQRPF-QKFHINIHILKDCPRRQVSCDN--CAASM-AFEDKEIHD  156 (170)
T ss_dssp             CCSTTCCCEEE-GGGHHHHHT-TCTTSEEEC--TTTCCEE-EGGGHHHHHHHTCTTCEEECTT--TCCEE-EGGGHHHHH
T ss_pred             CCCCCCCceec-HhHHHHHHh-cCCceeeEC--CCCChHH-HHHHHHHHhhhhCCCCCeECCC--CCCcc-CHHHHHhHH
Confidence            33467887665 456777763 334567889  5699887 6778899998777888889998  98877 457789999


Q ss_pred             cCCCCCC
Q psy16849        321 KCPSADT  327 (371)
Q Consensus       321 k~h~~~c  327 (371)
                      ..+.++-
T Consensus       157 ~~~~~~~  163 (170)
T 3hcs_A          157 QNCPLAL  163 (170)
T ss_dssp             TTCCC--
T ss_pred             HhCcChh
Confidence            8877654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.01  E-value=0.17  Score=35.17  Aligned_cols=23  Identities=13%  Similarity=0.131  Sum_probs=16.3

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      -.|.|+-  |+..|.....|++||+
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhh
Confidence            4567777  7777777777777776

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.71  E-value=0.49  Score=32.91  Aligned_cols=23  Identities=22%  Similarity=0.443  Sum_probs=18.4

Q ss_pred             CccccccCCCCCcccChhHHHHHhh
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      .+|.|  +.|+..|.....|++||+
T Consensus        11 ~~~~C--PrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKIC--PRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCC--TTTCCCCSSHHHHHHHHH
T ss_pred             CceeC--CcccccccchHHHHhhhh
Confidence            46788  558888888888888887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	371
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-15
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-11
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-13
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-13
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-11
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-11
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	8e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-11
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-11
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-11
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-07
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-10
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-10
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-10
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-10
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-10
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-09
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-10
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	8e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	4e-09
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	5e-09
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	6e-06
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	5e-06
d1bhia_	38	g.37.1.1 (A:) Transactivation domain of cre-bp1/at	1e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	2e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	2e-04
d1tf3a1	31	g.37.1.1 (A:1-40) Transcription factor IIIA, TFIII	4e-04
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.001
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	0.002
d2glia5	29	g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo	0.002
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	0.003

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (161), Expect = 5e-15
 Identities = 13/36 (36%), Positives = 22/36 (61%)

Query: 238 SHACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKW 273
           S +C  P CGK++    HLK H++ H+  + Y C++
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (133), Expect = 4e-11
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 269 YQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           + C    CG  F     L  H + H+  R + C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (146), Expect = 6e-13
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
                   + Y+C    CG  F+ S +L++H R HTG
Sbjct: 3   SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 13/21 (61%), Positives = 16/21 (76%)

Query: 246 CGKTYTKSSHLKAHLRTHTGE 266
           CGK+++ SS L  H RTHTGE
Sbjct: 18  CGKSFSHSSDLSKHRRTHTGE 38

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.9 bits (145), Expect = 9e-13
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 254 SHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
             +  +++    +K ++C + GC   F R   +  H + H  DR
Sbjct: 5   GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.5 bits (97), Expect = 3e-06
 Identities = 9/29 (31%), Positives = 19/29 (65%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEK 267
             C  PGC KT+ +  ++++H++TH  ++
Sbjct: 19  FECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.0 bits (138), Expect = 1e-11
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
             R  TG KP+QC    C   F+RSD L  H ++H  
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML 36

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.0 bits (133), Expect = 4e-11
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           ++PY C   GC   F R+ +L RH + H  
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.5 bits (116), Expect = 8e-09
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGE 266
           ++C HPGC K + ++  L  H ++H  +
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (133), Expect = 5e-11
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHF-RKHTGD 296
           RTH+GEKPY+C    C  +F +S  +  H  +KHT +
Sbjct: 1   RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 8e-04
 Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)

Query: 246 CGKTYTKSSHLKAH-LRTHTGE 266
           C   +T+S  +K H L+ HT  
Sbjct: 14  CHARFTQSGTMKMHILQKHTEN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (132), Expect = 6e-11
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           RTHTGEKPY C    C   F +   L  HF+++  
Sbjct: 1   RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 7e-05
 Identities = 5/22 (22%), Positives = 9/22 (40%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEK 267
           C KT+ +   L  H + +    
Sbjct: 14  CDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (131), Expect = 7e-11
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           H+GEKPY C    CG  F+RS  L +H R HTG
Sbjct: 2   HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 8e-07
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query: 246 CGKTYTKSSHLKAHLRTHTGE 266
           CGK +++SS L  H R HTGE
Sbjct: 13  CGKAFSRSSILVQHQRVHTGE 33

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHT 294
           +PY C + GC  KFA+S  L  H   H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (125), Expect = 5e-10
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHT 264
           + C   GC K + +S++LK+H+ TH 
Sbjct: 3   YVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGEK 267
             C    CGK +T+S  L+ H RTHTGEK
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (125), Expect = 5e-10
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           +P+ C W  CG +F RSDEL RH R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.1 bits (128), Expect = 2e-10
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           +PY C  + C  +F+RS +LTRH R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.4 bits (121), Expect = 2e-09
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTG 265
           +AC    C + +++S+ L  H+R HTG
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (127), Expect = 2e-10
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGE 266
           H C   GC K+Y++  +LK HLR+HTGE
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (123), Expect = 8e-10
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGD 296
           KP++C ++GC   ++R + L  H R HTG+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (126), Expect = 4e-10
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 264 TGEKPYQCKWKGCGWKFARSDELTRHFRK-HTGDRPFQCK 302
           +  KPY C+   CG  F+R D L  H ++ HT +RP +C+
Sbjct: 1   SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (123), Expect = 1e-09
 Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)

Query: 246 CGKTYTKSSHLKAHLR-THTGEKPYQCK 272
           CGK +++  HL  H++  HT E+P++C+
Sbjct: 11  CGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 4e-09
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH 293
           CGK++T  S    H+  H G +PY C    CG KF     L  H + H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCK 302
           +K Y C+   CG  F    +  RH   H G RP+ C 
Sbjct: 1   DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCG 34

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 8/31 (25%), Positives = 11/31 (35%)

Query: 233 RKKLTSHACFHPGCGKTYTKSSHLKAHLRTH 263
              L         CGK +    HL  H++ H
Sbjct: 23  SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (118), Expect = 4e-09
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGE 266
             C   GCGK ++   +L+ H+R HTG+
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (117), Expect = 5e-09
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGD 296
           KP+QC ++GCG +F+    L  H R HTGD
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (114), Expect = 1e-08
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
            +G++P+    + C   F       RH + HT 
Sbjct: 2   SSGKRPF--VCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 4e-04
 Identities = 6/26 (23%), Positives = 10/26 (38%)

Query: 241 CFHPGCGKTYTKSSHLKAHLRTHTGE 266
                C   +T  ++   HL+ HT  
Sbjct: 8   FVCRICLSAFTTKANCARHLKVHTDT 33

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 46.1 bits (110), Expect = 5e-08
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEK 267
           C + + +  HLK H R+HT EK
Sbjct: 8   CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           + + C+   C   FAR + L RH+R HT ++
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 1e-07
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR 297
           K + C    C  +F RSD L++H + H   +
Sbjct: 1   KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEK 267
           C K + +S HL  H++TH  +K
Sbjct: 8   CPKRFMRSDHLSKHIKTHQNKK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           +KP+QC+   C   F+RSD LT H R HTG
Sbjct: 1   QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.3 bits (95), Expect = 6e-06
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 246 CGKTYTKSSHLKAHLRTHTG 265
           C + +++S HL  H+RTHTG
Sbjct: 9   CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (95), Expect = 5e-06
 Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKH 293
           EKP+ C    CG KFARSDE  RH + H
Sbjct: 1   EKPFACDI--CGRKFARSDERKRHTKIH 26

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHT 294
           +KP+ C   GCG +F   D L  H  KH 
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 267 KPYQCKWKGCGWKFARSDELTRHFRKHT 294
           KPY+C    CG  F+++  L  H R HT
Sbjct: 1   KPYKCLE--CGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 246 CGKTYTKSSHLKAHLRTHT 264
           CGK ++++S L  H R HT
Sbjct: 8   CGKAFSQNSGLINHQRIHT 26

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 35.3 bits (81), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 236 LTSHACFHPGCGKTYTKSSHLKAHLRTHTGE 266
           +  + C    CG  Y K+  L+AHL  HTGE
Sbjct: 1   MKRYICSFADCGAAYNKNWKLQAHLSKHTGE 31

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.001
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 246 CGKTYTKSSHLKAHLRTHTGEKPY 269
           CGK +    HL  H  +H+GEKPY
Sbjct: 11  CGKIFRDVYHLNRHKLSHSGEKPY 34

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTGE 266
           H C    CGK + +SS LK H   HTGE
Sbjct: 3   HVCAE--CGKAFVESSKLKRHQLVHTGE 28

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.002
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 239 HACFHPGCGKTYTKSSHLKAHLRTHTG 265
           + C  PGC K YT  S L+ H++T  G
Sbjct: 3   YVCKLPGCTKRYTDPSSLRKHVKTVHG 29

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.003
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 266 EKPYQCKWKGCGWKFARSDELTRHFRKHTG 295
           EKPY C    CG +F R D ++ H R H G
Sbjct: 1   EKPYSCPV--CGLRFKRKDRMSYHVRSHDG 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	371
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.48
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.1
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.01
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.99
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.95
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.94
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.89
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.87
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.85
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.82
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.82
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.79
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.78
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.77
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.74
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.67
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.67
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.66
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.64
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.59
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.55
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.53
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.49
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.45
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.13
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.1
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.04
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.98
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.81
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.7
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.61
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.6
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.47
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.38
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.29
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.27
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.24
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.21
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.21
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.95
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.93
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.91
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.88
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.68
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.61
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.53
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.32
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.3
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.19
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.05
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.97
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.96
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.85
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.65
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.39
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.11
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.08
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.89
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.74
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.56
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.52
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.42
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.36
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.3
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.95
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.71
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.69
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.45
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	92.37
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.33
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.27
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.24
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	91.61
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.27
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.25
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	90.04
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.53
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.03
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	85.34
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	85.07
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	84.64
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	84.39
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	83.79

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=7.3e-15  Score=104.61  Aligned_cols=53  Identities=30%  Similarity=0.609  Sum_probs=51.1

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ||||.|  . ||+.|..+..|..|+++|+|++||+|.+  ||++|.....|.+|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            689999  4 9999999999999999999999999999  999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.2e-11  Score=86.11  Aligned_cols=46  Identities=39%  Similarity=0.829  Sum_probs=44.7

Q ss_pred             CCCcccCchhHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhh
Q psy16849        246 CGKTYTKSSHLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKH  293 (371)
Q Consensus       246 Cgk~F~~~s~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~H  293 (371)
                      ||+.|.....|..|+++|+|++||.|..  ||+.|.....|.+|+++|
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            9999999999999999999999999966  999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=7.2e-11  Score=78.47  Aligned_cols=37  Identities=43%  Similarity=0.919  Sum_probs=33.7

Q ss_pred             CCCccccccCCCCCcccChhHHHHHhh-hhcCCCCccCCC
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRHFR-KHTGDRPFQCKP  303 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H~r-~HtgeKPykC~~  303 (371)
                      -+|||+|..  ||+.|.++++|.+|++ +|+|+|||+|++
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            479999966  9999999999999986 799999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=3.6e-11  Score=79.59  Aligned_cols=36  Identities=17%  Similarity=0.352  Sum_probs=21.5

Q ss_pred             HHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        288 RHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       288 ~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      +|+++|+++|||+|.+  |||+|...++|.+|+++|++
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCC
Confidence            3555666666666666  66666666666666666554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=8.3e-11  Score=76.85  Aligned_cols=35  Identities=26%  Similarity=0.642  Sum_probs=29.2

Q ss_pred             cccccCCCCCcccChhHHHHHhhhhcCCCCccCCC
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKHTGDRPFQCKP  303 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~HtgeKPykC~~  303 (371)
                      |.|.+++|++.|.++.+|++|+++|+|+|||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67887888888888888888888888888888864

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=8.2e-11  Score=77.39  Aligned_cols=34  Identities=32%  Similarity=0.448  Sum_probs=23.8

Q ss_pred             HhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        289 HFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       289 H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |.|+|+|||||+|.+  |+++|.++++|++|+++|.
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCc
Confidence            566777777777777  7777777777777777664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=5.6e-11  Score=82.28  Aligned_cols=42  Identities=24%  Similarity=0.600  Sum_probs=29.3

Q ss_pred             hHHHHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        255 HLKAHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       255 ~L~~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      .|..|+. |+|++||.|.+++|++.|.++++|.+|+++|+|||
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555553 77777777766667777777777777777777765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1e-10  Score=77.36  Aligned_cols=37  Identities=32%  Similarity=0.690  Sum_probs=34.9

Q ss_pred             HHHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        258 AHLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       258 ~H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +|+++|+++|||.|..  |||+|.+.++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5889999999999966  999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1.6e-10  Score=75.50  Aligned_cols=33  Identities=24%  Similarity=0.516  Sum_probs=20.5

Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |+|+|||||+|.+  ||++|..++.|++|++.|++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCC
Confidence            3566666666666  66666666666666666653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.2e-10  Score=73.32  Aligned_cols=32  Identities=56%  Similarity=1.015  Sum_probs=17.8

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |+|+|||+|..  ||++|.++++|.+|+++|+||
T Consensus         2 HTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            55555555533  555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=7e-11  Score=81.78  Aligned_cols=44  Identities=11%  Similarity=0.233  Sum_probs=39.2

Q ss_pred             hhHHHHHhhhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        283 SDELTRHFRKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       283 ks~L~~H~r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +..|.+|++ |+|+|||+|.+.+|+++|.+.++|++|+++|.+++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345677885 99999999999999999999999999999999764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=8.7e-10  Score=70.47  Aligned_cols=33  Identities=15%  Similarity=0.478  Sum_probs=31.4

Q ss_pred             hhcCCCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        292 KHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       292 ~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +|+|+|||+|.+  ||++|.++++|.+|+++|+++
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            599999999999  999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=2.9e-10  Score=74.25  Aligned_cols=32  Identities=16%  Similarity=0.461  Sum_probs=21.8

Q ss_pred             hhhcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        291 RKHTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       291 r~HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |+|+|||||+|.+  |+++|.++++|++|++.++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHccccc
Confidence            4577777777777  7777777777777765444

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.4e-09  Score=68.60  Aligned_cols=31  Identities=55%  Similarity=1.215  Sum_probs=18.5

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |||.|.+++|+|+|.+.++|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            4566655556666666666666666666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=9.9e-10  Score=72.07  Aligned_cols=35  Identities=43%  Similarity=0.709  Sum_probs=32.8

Q ss_pred             HHhhhcCCCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        259 HLRTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       259 H~r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |.|+|+|||||+|..  |+++|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            789999999999966  99999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=8.6e-10  Score=71.42  Aligned_cols=30  Identities=23%  Similarity=0.450  Sum_probs=18.7

Q ss_pred             hcCCCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        293 HTGDRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       293 HtgeKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |+|||||+|.+  |+|+|.++.+|++|+++|.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccC
Confidence            45666666666  6666666666666666655

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.3e-09  Score=71.05  Aligned_cols=35  Identities=34%  Similarity=0.929  Sum_probs=32.8

Q ss_pred             cccccCCCCCcccCchhHHHHHhhhcCCCcccccc
Q psy16849        239 HACFHPGCGKTYTKSSHLKAHLRTHTGEKPYQCKW  273 (371)
Q Consensus       239 H~c~h~~Cgk~F~~~s~L~~H~r~HtgeKpf~C~~  273 (371)
                      +.|.+++||+.|.++.+|++|+++|+|+|||.|.+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            57888999999999999999999999999999964

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.7e-09  Score=70.48  Aligned_cols=34  Identities=44%  Similarity=0.853  Sum_probs=31.9

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |+|+|+|||+|..  ||++|.+++.|.+|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            6899999999966  999999999999999999876

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.4e-09  Score=66.90  Aligned_cols=30  Identities=40%  Similarity=0.967  Sum_probs=17.9

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |||+|.+++|+|+|.++++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            456665555666666666666666666554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2e-09  Score=67.24  Aligned_cols=30  Identities=50%  Similarity=1.041  Sum_probs=22.1

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |||.|.+++|+|+|.++++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            567777777777777777777777777765

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=5.2e-09  Score=65.87  Aligned_cols=31  Identities=16%  Similarity=0.419  Sum_probs=29.2

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      |||.|.+.+|+|+|.+.++|++|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            7999999999999999999999999999764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.4e-09  Score=66.15  Aligned_cols=30  Identities=13%  Similarity=0.288  Sum_probs=28.7

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      |||+|.+.||+|+|.+.++|++|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            799999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=5.6e-09  Score=67.48  Aligned_cols=32  Identities=28%  Similarity=0.711  Sum_probs=30.2

Q ss_pred             hcCCCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        263 HTGEKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       263 HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |+|+|||+|.+  |+|.|.++++|++|+++|+.+
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            78999999977  999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.64  E-value=7.3e-09  Score=64.18  Aligned_cols=29  Identities=38%  Similarity=0.937  Sum_probs=18.1

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |||.|.+  |+++|.++++|.+|+++|+|||
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            4566644  6666666666666666666654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=7.5e-09  Score=65.53  Aligned_cols=29  Identities=24%  Similarity=0.464  Sum_probs=18.2

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ||||.|.++||+|+|.+.++|++|++.|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            45666666666666666666666666655

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=2.6e-09  Score=66.73  Aligned_cols=30  Identities=20%  Similarity=0.359  Sum_probs=28.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      |||+|.+.||+|+|.+.++|++|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            799999999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=9.5e-09  Score=66.84  Aligned_cols=33  Identities=39%  Similarity=0.808  Sum_probs=29.1

Q ss_pred             hhhcCCCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        261 RTHTGEKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       261 r~HtgeKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |+|+|||||+|.+  |++.|.++++|++|++.+.+
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccC
Confidence            5799999999977  99999999999999865443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=1.7e-08  Score=63.88  Aligned_cols=31  Identities=35%  Similarity=0.871  Sum_probs=28.8

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      ||||.|.+++|+|+|.+.++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            6899999999999999999999999999864

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=62.56  Aligned_cols=29  Identities=34%  Similarity=0.794  Sum_probs=19.5

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |||.|.+  |+|+|.++++|.+|+++|+|||
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            4667754  7777777777777777777664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=1e-08  Score=63.41  Aligned_cols=29  Identities=52%  Similarity=1.077  Sum_probs=17.8

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |||+|.+++|+|+|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            45666666666666666666666666654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.55  E-value=1.3e-08  Score=63.09  Aligned_cols=29  Identities=14%  Similarity=0.346  Sum_probs=27.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      |||+|.+  |+++|.+.++|++|+++|++++
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            7999999  9999999999999999999864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=1.5e-08  Score=62.19  Aligned_cols=28  Identities=57%  Similarity=1.108  Sum_probs=17.9

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      ||||+|..  |+|+|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            46666644  66666666666666666664

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=5.5e-09  Score=64.19  Aligned_cols=28  Identities=18%  Similarity=0.481  Sum_probs=26.5

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      ||||+|.+  |+|+|.++++|.+|+++|++
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            79999999  99999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1e-08  Score=62.88  Aligned_cols=27  Identities=19%  Similarity=0.359  Sum_probs=13.3

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      |||.|.++||+|+|.+.++|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            344555555555555555555554444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=8e-09  Score=63.94  Aligned_cols=29  Identities=17%  Similarity=0.436  Sum_probs=27.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |||+|.++||+|+|.+.++|++|+++|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            79999999999999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.1e-08  Score=61.45  Aligned_cols=28  Identities=43%  Similarity=0.942  Sum_probs=25.6

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |||.|.+++|+|+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899999999999999999999999985

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3.7e-08  Score=65.05  Aligned_cols=36  Identities=11%  Similarity=0.341  Sum_probs=32.5

Q ss_pred             CCCCccCCCCCCCCCCCCcHHHHhhcc-CCCCCCCCCCC
Q psy16849        295 GDRPFQCKPNLVNPSIKEGKDLAATAK-CPSADTSQPFK  332 (371)
Q Consensus       295 geKPykC~~~~C~ksF~~~~~L~~H~k-~h~~~c~~~fk  332 (371)
                      .+|||+|++  ||++|.+..+|++|++ .|.+++++.|+
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            479999999  9999999999999986 79999887764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3.1e-08  Score=61.23  Aligned_cols=29  Identities=14%  Similarity=0.284  Sum_probs=27.3

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      |||.|.+  |+++|.++++|.+|+++|.+++
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            7999999  9999999999999999999764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.2e-07  Score=56.85  Aligned_cols=26  Identities=46%  Similarity=0.869  Sum_probs=15.1

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |||+|..  |||.|.+++.|.+|+|+|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            4566633  6666666666666666553

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=8e-07  Score=51.39  Aligned_cols=26  Identities=15%  Similarity=0.507  Sum_probs=21.3

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |++|++  |+|.|.+++.|+.|+++|.+
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            578888  88888888888888888863

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=7.9e-07  Score=53.25  Aligned_cols=26  Identities=12%  Similarity=0.443  Sum_probs=23.9

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |||+|.+  |||+|...+.|.+|+|+|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            7999999  9999999999999999873

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=8.6e-07  Score=53.49  Aligned_cols=29  Identities=17%  Similarity=0.298  Sum_probs=24.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |||.|.+.||+|+|...+.|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68888888888888888888888887663

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=2.6e-06  Score=50.67  Aligned_cols=27  Identities=15%  Similarity=0.364  Sum_probs=19.9

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      ||||.|.+  ||+.|.+.+..++|.+.|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            57777777  7777777777777777664

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=4.6e-06  Score=50.40  Aligned_cols=29  Identities=10%  Similarity=0.389  Sum_probs=23.3

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      ||||.|.+  |+.+|++++.+..|++.|.++
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            57888888  888888888888888877654

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.4e-05  Score=46.07  Aligned_cols=26  Identities=50%  Similarity=0.975  Sum_probs=21.7

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |++|+.  |+|.|++++.|+.|+|.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            568866  88888888888888888876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=1.7e-05  Score=47.07  Aligned_cols=27  Identities=59%  Similarity=1.055  Sum_probs=25.3

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      ||||.|++  ||+.|.+++..++|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            68999977  9999999999999999995

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.60  E-value=6e-06  Score=48.96  Aligned_cols=27  Identities=15%  Similarity=0.263  Sum_probs=19.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      .||+|..+||+++|...+.|+||.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467777777777777777777776654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.1e-05  Score=49.05  Aligned_cols=28  Identities=18%  Similarity=0.404  Sum_probs=18.7

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhc-cCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATA-KCPS  324 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~-k~h~  324 (371)
                      |||.|.+.||.|+|...++..+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            466677777777777766666665 5655

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=2.7e-05  Score=47.99  Aligned_cols=31  Identities=35%  Similarity=0.751  Sum_probs=22.5

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCCCc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDRPF  299 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeKPy  299 (371)
                      |...|++  |||.|....+|.+|...|+|||||
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            4456754  777777777777777777777776

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=1.3e-05  Score=47.69  Aligned_cols=28  Identities=46%  Similarity=0.837  Sum_probs=13.8

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      ||.|.+.+|.|.|.....|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            4444444455555555555555444444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=6.7e-05  Score=45.04  Aligned_cols=29  Identities=34%  Similarity=0.838  Sum_probs=25.5

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      |||.|.+.+|+|++...+.|++|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999999999999999999999997654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=6.5e-05  Score=44.63  Aligned_cols=30  Identities=17%  Similarity=0.359  Sum_probs=25.7

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      |||.|.++||.|.|.+...|.||..+|.++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            689999999999999999999998877653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.24  E-value=8.1e-05  Score=43.98  Aligned_cols=28  Identities=36%  Similarity=0.826  Sum_probs=25.1

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      .||+|...+|++.|...+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899999999999999999999998873

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=5.6e-05  Score=45.84  Aligned_cols=30  Identities=33%  Similarity=0.865  Sum_probs=26.9

Q ss_pred             CccccccCCCCCcccChhHHHHHh-hhhcCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHF-RKHTGD  296 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~-r~Htge  296 (371)
                      |||.|.+++|.|.|...++...|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            689999999999999999999997 888754

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=3.9e-05  Score=49.05  Aligned_cols=28  Identities=21%  Similarity=0.377  Sum_probs=18.0

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      +|||.|...||+.+|.+.+.|..|.+.|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            5666666666666666666666665544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00016  Score=43.55  Aligned_cols=29  Identities=48%  Similarity=1.077  Sum_probs=26.7

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      ||||.|.+  |..+|.+++.+.-|.|.|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            68999977  999999999999999999874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00023  Score=44.40  Aligned_cols=29  Identities=38%  Similarity=0.928  Sum_probs=21.4

Q ss_pred             ccccccCCCC---CcccChhHHHHHhhhhcCC
Q psy16849        268 PYQCKWKGCG---WKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       268 pf~C~~~~Cg---K~F~~ks~L~~H~r~Htge  296 (371)
                      -|.|.|.+|.   +.|..+..|..|+|+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            4677777774   4577788888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00024  Score=41.81  Aligned_cols=29  Identities=45%  Similarity=0.961  Sum_probs=19.6

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      ++||+|.+  |...-..++.|..|+|.|+|+
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            46677755  777767777777777777663

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00029  Score=41.24  Aligned_cols=21  Identities=48%  Similarity=0.821  Sum_probs=12.9

Q ss_pred             CCCcccChhHHHHHhhhhcCC
Q psy16849        276 CGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       276 CgK~F~~ks~L~~H~r~Htge  296 (371)
                      |||.|...+.|++|..+|+||
T Consensus         8 cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           8 CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             TCCEESSHHHHHHHGGGTSCC
T ss_pred             HhHHHHHHHHHHHHhhcccCC
Confidence            666666666666666666554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00019  Score=44.09  Aligned_cols=28  Identities=43%  Similarity=0.795  Sum_probs=25.5

Q ss_pred             cCCCCCcccCchhHHHHHhhhcCCCccc
Q psy16849        243 HPGCGKTYTKSSHLKAHLRTHTGEKPYQ  270 (371)
Q Consensus       243 h~~Cgk~F~~~s~L~~H~r~HtgeKpf~  270 (371)
                      |+.|||.|....+|.+|...|++||||.
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            3559999999999999999999999983

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00036  Score=44.46  Aligned_cols=30  Identities=40%  Similarity=0.860  Sum_probs=27.9

Q ss_pred             CCCccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        265 GEKPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       265 geKpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      .+|||.|..++|+.+|...+.|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            589999999999999999999999999885

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00059  Score=40.23  Aligned_cols=27  Identities=37%  Similarity=0.756  Sum_probs=20.9

Q ss_pred             cccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      |.|.+  ||......+-|+.|+|.|++++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCCC
Confidence            67765  8888888888888888888764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00052  Score=40.12  Aligned_cols=27  Identities=52%  Similarity=0.930  Sum_probs=23.8

Q ss_pred             ccccccCCCCCcccCchhHHHHHhhhcCC
Q psy16849        238 SHACFHPGCGKTYTKSSHLKAHLRTHTGE  266 (371)
Q Consensus       238 ~H~c~h~~Cgk~F~~~s~L~~H~r~Htge  266 (371)
                      .|.|.-  |||.|...+.|++|..+|+|+
T Consensus         2 ~hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            566654  999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00052  Score=40.33  Aligned_cols=29  Identities=21%  Similarity=0.527  Sum_probs=27.0

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      |+||+|.+  |...-+..+.|.-|++.|.++
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            68999999  999999999999999999864

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.32  E-value=0.00099  Score=37.85  Aligned_cols=24  Identities=17%  Similarity=0.338  Sum_probs=16.6

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |+|..  |.++|..++.|.+|++.|-
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            56777  7777777777777776653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.30  E-value=0.0014  Score=37.15  Aligned_cols=24  Identities=38%  Similarity=0.819  Sum_probs=21.6

Q ss_pred             cccccCCCCCcccChhHHHHHhhhhc
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |+|.+  |.++|..++.|.+|+|+|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            68977  9999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.19  E-value=0.0017  Score=37.43  Aligned_cols=26  Identities=42%  Similarity=0.673  Sum_probs=19.0

Q ss_pred             ccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        270 QCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       270 ~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +|..  |.|.|.++..|+.|-|.|+|||
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            4643  7777777777777777777765

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0011  Score=42.88  Aligned_cols=25  Identities=16%  Similarity=0.357  Sum_probs=19.9

Q ss_pred             cCCCCccCCCCCCCCCCCCcHHHHhhc
Q psy16849        294 TGDRPFQCKPNLVNPSIKEGKDLAATA  320 (371)
Q Consensus       294 tgeKPykC~~~~C~ksF~~~~~L~~H~  320 (371)
                      +|.|||.|.+  |+|+|.-.+.+.+|.
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhh
Confidence            4678888888  888888888888876

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.01  E-value=0.0016  Score=39.29  Aligned_cols=22  Identities=23%  Similarity=0.422  Sum_probs=14.5

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      ||.|.+  |++.|.+.+.|-||..
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHT
T ss_pred             Cccccc--ccchhhHHHHHHHHHH
Confidence            566666  6666666666666654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0018  Score=40.22  Aligned_cols=29  Identities=34%  Similarity=0.767  Sum_probs=25.4

Q ss_pred             ccccccCCCC---CcccCchhHHHHHhhhcCC
Q psy16849        238 SHACFHPGCG---KTYTKSSHLKAHLRTHTGE  266 (371)
Q Consensus       238 ~H~c~h~~Cg---k~F~~~s~L~~H~r~Htge  266 (371)
                      .+.|.|.+|.   +.|.....|..|||+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            5789999985   4599999999999999986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.001  Score=38.77  Aligned_cols=26  Identities=19%  Similarity=0.500  Sum_probs=14.4

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |||+|..  |+..-...+.|++|+|.|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            4555555  5555555555555555553

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0011  Score=39.10  Aligned_cols=24  Identities=29%  Similarity=0.481  Sum_probs=21.6

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      ||.|..  |..+|+++.+|.+||+..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            789999  999999999999999753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.003  Score=40.73  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=23.5

Q ss_pred             cCCCccccccCCCCCcccChhHHHHHhh
Q psy16849        264 TGEKPYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       264 tgeKpf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      +|.|||.|.+  |+|.|..++.+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            5789999976  9999999999999975

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.0035  Score=36.86  Aligned_cols=26  Identities=12%  Similarity=0.176  Sum_probs=24.5

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      |.|.+  |+...+..+-|++|++.|+++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            88999  999999999999999999865

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.11  E-value=0.0049  Score=39.18  Aligned_cols=28  Identities=14%  Similarity=0.374  Sum_probs=19.3

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      +.|+|.+  |++.|.+...|=-|+++|..+
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcch
Confidence            4577777  777777777777777776543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0067  Score=35.20  Aligned_cols=26  Identities=46%  Similarity=0.956  Sum_probs=23.6

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |||+|.+  |...-...+.|..|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            7899977  9999999999999999985

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.0047  Score=36.52  Aligned_cols=26  Identities=15%  Similarity=0.330  Sum_probs=20.7

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccCCC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKCPS  324 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~h~  324 (371)
                      |||+|.+  |..+-...++|+.|+++.|
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccc--cccccccchhhhhhhhccc
Confidence            5788888  8888888888888887655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.74  E-value=0.011  Score=34.67  Aligned_cols=29  Identities=38%  Similarity=0.693  Sum_probs=19.0

Q ss_pred             CCccccccCCCCCcccChhHHHHHhhhhcCC
Q psy16849        266 EKPYQCKWKGCGWKFARSDELTRHFRKHTGD  296 (371)
Q Consensus       266 eKpf~C~~~~CgK~F~~ks~L~~H~r~Htge  296 (371)
                      +..|.|..  |...|.++-.|+.||-.|+||
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            34566755  777777777777777766664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.56  E-value=0.0063  Score=34.94  Aligned_cols=26  Identities=8%  Similarity=0.171  Sum_probs=23.7

Q ss_pred             cCCCCCCCCCCCCcHHHHhhccCCCCCC
Q psy16849        300 QCKPNLVNPSIKEGKDLAATAKCPSADT  327 (371)
Q Consensus       300 kC~~~~C~ksF~~~~~L~~H~k~h~~~c  327 (371)
                      +|+.  |.|+|.++..|+-|-+.|.+++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            6999  9999999999999999998763

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.015  Score=34.29  Aligned_cols=28  Identities=36%  Similarity=0.876  Sum_probs=23.7

Q ss_pred             CccccccCCCCCcccChhHHHHHhhh-hcCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRK-HTGD  296 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~-Htge  296 (371)
                      |||.|.+  |..+....++|+.|+++ |..+
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccc--cccccccchhhhhhhhcccccC
Confidence            6899988  99999999999999885 4433

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.42  E-value=0.012  Score=37.30  Aligned_cols=29  Identities=31%  Similarity=0.766  Sum_probs=23.7

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcCCC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTGDR  297 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~HtgeK  297 (371)
                      +.|+|.+  |++.|.+...|--|++.|..++
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcchH
Confidence            5688877  9999999999999988887654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.36  E-value=0.0041  Score=35.91  Aligned_cols=25  Identities=12%  Similarity=0.206  Sum_probs=17.4

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      |.|.+++|+|.|+....|+.|+-.|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            5677777777777777777776544

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.30  E-value=0.011  Score=35.48  Aligned_cols=26  Identities=46%  Similarity=0.949  Sum_probs=22.4

Q ss_pred             ccccccCCCCCcccChhHHHHHhh-hhcC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFR-KHTG  295 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r-~Htg  295 (371)
                      ||.|.+  |++.|.+++-|.+|.. .|.|
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            799977  9999999999999965 5665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.0044  Score=36.55  Aligned_cols=23  Identities=30%  Similarity=0.573  Sum_probs=12.9

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      +||+|.+  |..--++.++|.+|++
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHH
Confidence            3555555  5555555555555554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.71  E-value=0.016  Score=34.59  Aligned_cols=28  Identities=36%  Similarity=0.808  Sum_probs=13.7

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      .|.|.++.|+-.|.....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            3444444455555555555555444444

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.69  E-value=0.016  Score=33.34  Aligned_cols=26  Identities=35%  Similarity=0.791  Sum_probs=19.7

Q ss_pred             cccccCCCCCcccChhHHHHHhhhhc
Q psy16849        269 YQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       269 f~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |.|.+++|+|.|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56777778888888888887777664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.45  E-value=0.034  Score=32.61  Aligned_cols=27  Identities=26%  Similarity=0.961  Sum_probs=23.4

Q ss_pred             CccccccCCCCCcccChhHHHHHhhhhcC
Q psy16849        267 KPYQCKWKGCGWKFARSDELTRHFRKHTG  295 (371)
Q Consensus       267 Kpf~C~~~~CgK~F~~ks~L~~H~r~Htg  295 (371)
                      +||+|.+  |.....+.++|..|++.-.|
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccce--ecccccCcchHHHHHHHHcc
Confidence            6899988  99999999999999885443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.37  E-value=0.014  Score=34.19  Aligned_cols=24  Identities=13%  Similarity=0.069  Sum_probs=16.7

Q ss_pred             cCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        300 QCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       300 kC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      .|++.|||+-|.....|..|.+..
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHH
Confidence            467777777777777777776643

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.33  E-value=0.018  Score=33.70  Aligned_cols=29  Identities=10%  Similarity=0.329  Sum_probs=25.8

Q ss_pred             CCCccCCCCCCCCCCCCcHHHHhhccCCCCC
Q psy16849        296 DRPFQCKPNLVNPSIKEGKDLAATAKCPSAD  326 (371)
Q Consensus       296 eKPykC~~~~C~ksF~~~~~L~~H~k~h~~~  326 (371)
                      |.-|.|.+  |...|++.-.|+.||-.|.++
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            56799999  999999999999999888753

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.27  E-value=0.022  Score=32.15  Aligned_cols=21  Identities=24%  Similarity=0.621  Sum_probs=17.3

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhc
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATA  320 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~  320 (371)
                      ||+|.-  |...|..+.+|..||
T Consensus         2 pykcss--csqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHH
Confidence            688888  888888888888886

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.24  E-value=0.03  Score=33.32  Aligned_cols=30  Identities=43%  Similarity=0.782  Sum_probs=27.4

Q ss_pred             cccccccCCCCCcccCchhHHHHHhhhcCC
Q psy16849        237 TSHACFHPGCGKTYTKSSHLKAHLRTHTGE  266 (371)
Q Consensus       237 ~~H~c~h~~Cgk~F~~~s~L~~H~r~Htge  266 (371)
                      +++.|..+.|+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            567888999999999999999999999986

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.61  E-value=0.055  Score=31.62  Aligned_cols=23  Identities=35%  Similarity=1.086  Sum_probs=20.0

Q ss_pred             ccccccCCCCCcccChhHHHHHhhh
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRK  292 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~  292 (371)
                      ||.|.+  |...|..+.+|..||+.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            688977  99999999999999874

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.049  Score=31.59  Aligned_cols=24  Identities=4%  Similarity=0.147  Sum_probs=16.5

Q ss_pred             cCCCCCCCCCCCCcHHHHhhccCC
Q psy16849        300 QCKPNLVNPSIKEGKDLAATAKCP  323 (371)
Q Consensus       300 kC~~~~C~ksF~~~~~L~~H~k~h  323 (371)
                      .|...||.|-|+..+.+++|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            466667777777777777776655

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.25  E-value=0.085  Score=30.57  Aligned_cols=23  Identities=43%  Similarity=0.935  Sum_probs=14.5

Q ss_pred             cccCCCCCcccCchhHHHHHhhh
Q psy16849        241 CFHPGCGKTYTKSSHLKAHLRTH  263 (371)
Q Consensus       241 c~h~~Cgk~F~~~s~L~~H~r~H  263 (371)
                      |.|.+|+|-|...+.++.|+.+|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            45556666666666666666555

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.04  E-value=0.084  Score=30.34  Aligned_cols=22  Identities=18%  Similarity=0.415  Sum_probs=18.4

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      ||+|..  |||.|-++.+|-.|..
T Consensus         1 pf~c~k--cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHH
Confidence            688888  8898888888888864

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.53  E-value=0.094  Score=30.58  Aligned_cols=22  Identities=32%  Similarity=0.798  Sum_probs=19.2

Q ss_pred             ccccCCCCCcccChhHHHHHhh
Q psy16849        270 QCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       270 ~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      .|++++||+.|+.+..|.-|++
T Consensus         2 ~cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHH
Confidence            5888999999999999988876

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.03  E-value=0.053  Score=31.82  Aligned_cols=26  Identities=8%  Similarity=0.238  Sum_probs=19.1

Q ss_pred             CCccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        297 RPFQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       297 KPykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |.|.|.-.+|+.+|.++.++++|..+
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhh
Confidence            35777777788888888888877654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.04  E-value=0.19  Score=28.81  Aligned_cols=22  Identities=32%  Similarity=0.785  Sum_probs=19.2

Q ss_pred             ccccccCCCCCcccChhHHHHHhh
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      ||+|  ..|||.+.++.+|..|..
T Consensus         1 pf~c--~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFEC--PKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBC--TTTCCBCSSHHHHHHHHH
T ss_pred             CCcc--ccchhhhhhHhHHHHHHH
Confidence            6899  559999999999999864

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.34  E-value=0.12  Score=29.05  Aligned_cols=22  Identities=14%  Similarity=0.294  Sum_probs=18.7

Q ss_pred             ccCCCCCCCCCCCCcHHHHhhccC
Q psy16849        299 FQCKPNLVNPSIKEGKDLAATAKC  322 (371)
Q Consensus       299 ykC~~~~C~ksF~~~~~L~~H~k~  322 (371)
                      |.|.+  |-|.|.+++++..|++.
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            67888  88999999999888874

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.07  E-value=0.24  Score=27.74  Aligned_cols=22  Identities=32%  Similarity=0.848  Sum_probs=19.6

Q ss_pred             ccccccCCCCCcccChhHHHHHhh
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFR  291 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r  291 (371)
                      ||+|.-  |...|.++.+|+.|+.
T Consensus         2 pykcss--csqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHHH
Confidence            799954  9999999999999975

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.64  E-value=0.15  Score=31.09  Aligned_cols=22  Identities=18%  Similarity=0.404  Sum_probs=19.4

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhcc
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAK  321 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k  321 (371)
                      .|.|..  |+|.|.+...+.+|..
T Consensus         4 afvcsk--cgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHH
T ss_pred             eeeecc--cccchhcchHHHHHhh
Confidence            488999  9999999999999975

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.39  E-value=0.38  Score=27.64  Aligned_cols=25  Identities=28%  Similarity=0.598  Sum_probs=14.9

Q ss_pred             ccccccCCCCCcccChhHHHHHhhhhc
Q psy16849        268 PYQCKWKGCGWKFARSDELTRHFRKHT  294 (371)
Q Consensus       268 pf~C~~~~CgK~F~~ks~L~~H~r~Ht  294 (371)
                      |-+|  +.|..+...+..|+.|.|+|-
T Consensus         2 pekc--~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKC--SECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEEC--SSSSCEESSHHHHHHHHGGGC
T ss_pred             CccC--cccccccCcHHHHHHhhcccc
Confidence            3456  336666666666666666663

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.79  E-value=0.22  Score=28.68  Aligned_cols=26  Identities=15%  Similarity=0.222  Sum_probs=23.3

Q ss_pred             CccCCCCCCCCCCCCcHHHHhhccCCCC
Q psy16849        298 PFQCKPNLVNPSIKEGKDLAATAKCPSA  325 (371)
Q Consensus       298 PykC~~~~C~ksF~~~~~L~~H~k~h~~  325 (371)
                      |-+|..  |..+...+..|+-|.|.|-.
T Consensus         2 pekc~e--csyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSE--CSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcc--cccccCcHHHHHHhhccccC
Confidence            568999  99999999999999998864