Psyllid ID: psy16939
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 174 | 2.2.26 [Sep-21-2011] | |||||||
| Q3UP75 | 523 | UDP-glucuronosyltransfera | yes | N/A | 0.804 | 0.267 | 0.398 | 4e-22 | |
| Q8JZZ0 | 523 | UDP-glucuronosyltransfera | no | N/A | 0.804 | 0.267 | 0.384 | 2e-21 | |
| Q88168 | 515 | Ecdysteroid UDP-glucosylt | N/A | N/A | 0.764 | 0.258 | 0.355 | 2e-20 | |
| O75795 | 530 | UDP-glucuronosyltransfera | yes | N/A | 0.793 | 0.260 | 0.331 | 1e-19 | |
| P54855 | 530 | UDP-glucuronosyltransfera | no | N/A | 0.793 | 0.260 | 0.331 | 1e-19 | |
| O77649 | 530 | UDP-glucuronosyltransfera | N/A | N/A | 0.793 | 0.260 | 0.337 | 3e-19 | |
| Q3SY77 | 523 | UDP-glucuronosyltransfera | no | N/A | 0.833 | 0.277 | 0.351 | 5e-19 | |
| Q6NUS8 | 523 | UDP-glucuronosyltransfera | no | N/A | 0.833 | 0.277 | 0.351 | 8e-19 | |
| Q09426 | 541 | 2-hydroxyacylsphingosine | no | N/A | 0.839 | 0.269 | 0.331 | 2e-18 | |
| P36512 | 531 | UDP-glucuronosyltransfera | no | N/A | 0.793 | 0.259 | 0.324 | 2e-18 |
| >sp|Q3UP75|UD3A1_MOUSE UDP-glucuronosyltransferase 3A1 OS=Mus musculus GN=Ugt3a1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ 91
GFV ++ GSVV + S+E F L + W ++ P +L NV I
Sbjct: 293 SGFVLVALGSVVSMIQ-SKEIIKEMNSAFAHLPQGVLWTCKSSHWP--KDVSLAPNVKIM 349
Query: 92 KWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151
W PQ D+LAHP++RLF+THGG++S+MEA GVP++G+PFFGDQ NMV + + +
Sbjct: 350 DWLPQIDLLAHPSIRLFVTHGGMNSVMEAVHHGVPMVGIPFFGDQPENMVRVEAKNLGVS 409
Query: 152 EPIQTLTKQSFLKNAQTMLNDPR 174
+QTL +SFL + ++ D R
Sbjct: 410 IQLQTLKAESFLLTMKEVIEDQR 432
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Mus musculus (taxid: 10090) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 7 |
| >sp|Q8JZZ0|UD3A2_MOUSE UDP-glucuronosyltransferase 3A2 OS=Mus musculus GN=Ugt3a2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ 91
GFV ++ GS+V + S+E F L + W ++ P +L NV I
Sbjct: 293 SGFVLVALGSIVSMIQ-SKEIIKEMNSAFAHLPQGVLWTCKTSHWP--KDVSLAPNVKIM 349
Query: 92 KWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151
W PQTD+LAHP++RLF+THGG++S+MEA GVP++G+PFF DQ NMV + + +
Sbjct: 350 DWLPQTDLLAHPSIRLFVTHGGMNSVMEAVHHGVPMVGIPFFFDQPENMVRVEAKNLGVS 409
Query: 152 EPIQTLTKQSFLKNAQTMLNDPR 174
+QTL +SF + ++ D R
Sbjct: 410 IQLQTLKAESFALTMKKIIEDKR 432
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q88168|UDPE_NPVSL Ecdysteroid UDP-glucosyltransferase OS=Spodoptera littoralis nuclear polyhedrosis virus GN=EGT PE=3 SV=1 | Back alignment and function description |
|---|
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DL + + + G VY+S GS V + + F+E F+ + + WK+D +D + +
Sbjct: 289 NDLAEFLENSTMGVVYVSLGSSVRASDMDSNMLNVFVETFRSIPYRVLWKVD-KSDKIFD 347
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
+P NV IQ+W+PQ +L H N+++FIT GG+ S EA GVP+ GVP GDQ+ N+
Sbjct: 348 --NIPSNVLIQRWFPQRRVLKHRNVKVFITQGGVQSTDEAIDAGVPMFGVPIMGDQFYNV 405
Query: 141 VLLRHRGYALIEPIQTLT 158
+ + Y + + TLT
Sbjct: 406 YM--YETYGIGRGVDTLT 421
|
Catalyzes the transfer of glucose from UDP-glucose to ecdysteroids which are insect molting hormones. Expression of egt interferes with normal insect development and block molting. Lepidoptera (taxid: 7088) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|O75795|UDB17_HUMAN UDP-glucuronosyltransferase 2B17 OS=Homo sapiens GN=UGT2B17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 29 AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88
+ + G V S GS++ + +SEE+ Q+ + W+ D P TL N
Sbjct: 300 SGENGIVVFSLGSMI--SNMSEESANMIASALAQIPQKVLWRFD-GKKP----NTLGSNT 352
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY 148
+ KW PQ D+L HP + FITHGG + + EA G+P++G+P F DQ+ N+ ++ +G
Sbjct: 353 RLYKWLPQNDLLGHPKTKAFITHGGTNGIYEAIYHGIPMVGIPLFADQHDNIAHMKAKGA 412
Query: 149 ALIEPIQTLTKQSFLKNAQTMLNDP 173
AL I+T++ + L ++++NDP
Sbjct: 413 ALSVDIRTMSSRDLLNALKSVINDP 437
|
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. The major substrates of this isozyme are eugenol > 4-methylumbelliferone > dihydrotestosterone (DHT) > androstane-3-alpha,17-beta-diol (3-alpha-diol) > testosterone > androsterone (ADT). Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|P54855|UDB15_HUMAN UDP-glucuronosyltransferase 2B15 OS=Homo sapiens GN=UGT2B15 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 29 AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88
+ + G V S GS++ + +SEE+ Q+ + W+ D P TL N
Sbjct: 300 SGENGIVVFSLGSMI--SNMSEESANMIASALAQIPQKVLWRFD-GKKP----NTLGSNT 352
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY 148
+ KW PQ D+L HP + FITHGG + + EA G+P++G+P F DQ+ N+ ++ +G
Sbjct: 353 RLYKWLPQNDLLGHPKTKAFITHGGTNGIYEAIYHGIPMVGIPLFADQHDNIAHMKAKGA 412
Query: 149 ALIEPIQTLTKQSFLKNAQTMLNDP 173
AL I+T++ + L ++++NDP
Sbjct: 413 ALSVDIRTMSSRDLLNALKSVINDP 437
|
UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme displays activity toward several classes of xenobiotic substrates, including simple phenolic compounds, 7-hydroxylated coumarins, flavonoids, anthraquinones, and certain drugs and their hydroxylated metabolites. It also catalyzes the glucuronidation of endogenous estrogens and androgens. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|O77649|UDB20_MACFA UDP-glucuronosyltransferase 2B20 OS=Macaca fascicularis GN=UGT2B20 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 29 AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88
+ + G V S GS++ + +SEE Q+ + WK D P TL N
Sbjct: 300 SGENGVVVFSLGSMI--SNMSEERANMIASALAQIPQKVLWKFD-GKKP----NTLGSNT 352
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY 148
+ KW PQ D+L HP + FITHGG + + EA G+P++G+P F DQ+ N+V ++ +G
Sbjct: 353 RLYKWLPQNDLLGHPKTKAFITHGGTNGIYEAIYHGIPMVGIPLFADQHDNIVHMKVKGA 412
Query: 149 ALIEPIQTLTKQSFLKNAQTMLNDP 173
AL I+T++ + L ++++N+P
Sbjct: 413 ALSVDIRTMSSRDLLNALKSVINEP 437
|
UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme has glucuronidating capacity with androgens, such as testosterone, dihydrotestosterone (DHT) and 3-alpha-diol. It is also active on catecholoestrogens including 1,3,5,10-oestratriene-3,4-diol-17-one. Macaca fascicularis (taxid: 9541) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q3SY77|UD3A2_HUMAN UDP-glucuronosyltransferase 3A2 OS=Homo sapiens GN=UGT3A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 27 ADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
A GFV ++ GS+V+ + E K F L + WK ++ P L
Sbjct: 288 AKFGDSGFVLVTLGSMVNTCQNPEIFK-EMNNAFAHLPQGVIWKCQCSHWP--KDVHLAA 344
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
NV I W PQ+D+LAHP++RLF+THGG +S+MEA GVP++G+P FGDQ NMV + +
Sbjct: 345 NVKIVDWLPQSDLLAHPSIRLFVTHGGQNSIMEAIQHGVPMVGIPLFGDQPENMVRVEAK 404
Query: 147 GYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ + ++ L ++ + ++ D R
Sbjct: 405 KFGVSIQLKKLKAETLALKMKQIMEDKR 432
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q6NUS8|UD3A1_HUMAN UDP-glucuronosyltransferase 3A1 OS=Homo sapiens GN=UGT3A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 27 ADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
A+ GFV ++FGS+++ T S+E F L + W ++ P L
Sbjct: 288 ANFGDAGFVLVAFGSMLN-THQSQEVLKKMHNAFAHLPQGVIWTCQSSHWP--RDVHLAT 344
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
NV I W PQ+D+LAHP++RLF+THGG +S+MEA GVP++G+P GDQ+ NMV + +
Sbjct: 345 NVKIVDWLPQSDLLAHPSIRLFVTHGGQNSVMEAIRHGVPMVGLPVNGDQHGNMVRVVAK 404
Query: 147 GYALIEPIQTLTKQSFLKNAQTMLNDPR 174
Y + + +T + + ++ D R
Sbjct: 405 NYGVSIRLNQVTADTLTLTMKQVIEDKR 432
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q09426|CGT_RAT 2-hydroxyacylsphingosine 1-beta-galactosyltransferase OS=Rattus norvegicus GN=Ugt8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVL 79
DLQ+ D A+ GFV +SFG+ V LSE+ +L + W+ T
Sbjct: 274 EDLQRWVDGAQEHGFVLVSFGAGVK--YLSEDIANKLAGALGRLPQKVIWRFSGTK---- 327
Query: 80 NAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
K L +N + +W PQ D+L H N+R F++HGG++S+ E GVPV+G+P FGD Y
Sbjct: 328 -PKNLGNNTKLIEWLPQNDLLGHSNIRAFLSHGGLNSIFETMYHGVPVVGIPLFGDHYDT 386
Query: 140 MVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173
M ++ +G ++ T+T+ ++N+P
Sbjct: 387 MTRVQAKGMGILLEWNTVTEGELYDALVKVINNP 420
|
Catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|P36512|UDB13_RABIT UDP-glucuronosyltransferase 2B13 OS=Oryctolagus cuniculus GN=UGT2B13 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 29 AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88
+ + G V S GS++ + L+EE QL + W+ + +L + N
Sbjct: 301 SGEEGVVVFSLGSMI--SNLTEERANVIASALAQLPQKVLWRFEGKKPDMLGS-----NT 353
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY 148
+ KW PQ D+L HP + FITHGG + + EA G+P++G+P FGDQ N+V ++ +G
Sbjct: 354 RLYKWIPQNDLLGHPKTKAFITHGGANGVFEAIYHGIPMVGLPLFGDQLDNIVYMKAKGA 413
Query: 149 ALIEPIQTLTKQSFLKNAQTMLNDP 173
A+ ++T++ L +T++NDP
Sbjct: 414 AVKLNLKTMSSADLLNALKTVINDP 438
|
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Acts on small phenolic agents such as 2-beta-naphthol and 4-methylumbelliferone as well as bulky phenolic compounds like 2-hydroxy- and 4-hydroxybiphenyl. In contrast to 2B16 it is active toward octylgallate. Oryctolagus cuniculus (taxid: 9986) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 174 | ||||||
| 328719889 | 541 | PREDICTED: UDP-glucuronosyltransferase 2 | 0.850 | 0.273 | 0.450 | 2e-29 | |
| 328701160 | 518 | PREDICTED: UDP-glucuronosyltransferase 2 | 0.821 | 0.276 | 0.439 | 9e-29 | |
| 194880177 | 530 | GG21117 [Drosophila erecta] gi|190657568 | 0.856 | 0.281 | 0.448 | 9e-29 | |
| 195344840 | 526 | GM17278 [Drosophila sechellia] gi|194134 | 0.856 | 0.283 | 0.448 | 2e-28 | |
| 195484165 | 530 | GE13191 [Drosophila yakuba] gi|194176678 | 0.856 | 0.281 | 0.448 | 2e-28 | |
| 66771225 | 437 | IP11804p [Drosophila melanogaster] | 0.856 | 0.340 | 0.448 | 3e-28 | |
| 24584982 | 530 | CG10178, isoform A [Drosophila melanogas | 0.856 | 0.281 | 0.448 | 4e-28 | |
| 66771065 | 511 | IP11704p [Drosophila melanogaster] | 0.856 | 0.291 | 0.448 | 4e-28 | |
| 157126027 | 523 | glucosyl/glucuronosyl transferases [Aede | 0.850 | 0.282 | 0.424 | 5e-28 | |
| 193690713 | 508 | PREDICTED: UDP-glucuronosyltransferase 1 | 0.862 | 0.295 | 0.422 | 7e-28 |
| >gi|328719889|ref|XP_001945842.2| PREDICTED: UDP-glucuronosyltransferase 2B7-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DL+ D+A+ G +Y S GSVV +K+ +ET L +LK + WK + P
Sbjct: 292 TDLKTILDSAEHGVIYFSLGSVVKSSKMPQETVSLLLSELAKLKQTVLWKWEDDQLP--- 348
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV ++KW+PQ DIL HPN RLFITHGGI SL+EA GVP+L +P FGDQ N
Sbjct: 349 --NLPKNVMVKKWFPQNDILGHPNCRLFITHGGILSLIEAVYHGVPMLSIPVFGDQAHNS 406
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173
+ + RG+AL P LT ++F Q +L DP
Sbjct: 407 IEAQSRGFALYVPFFELTAENFGSKLQQLLRDP 439
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328701160|ref|XP_001949845.2| PREDICTED: UDP-glucuronosyltransferase 2C1-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 5/148 (3%)
Query: 27 ADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
++A+ G +Y SFG++VDP++L T F+ V K+LK + WK D N P LPD
Sbjct: 286 VESAEHGVIYFSFGTIVDPSRLPNSTIEIFINVLKKLKQKVMWKWDSNNLP-----QLPD 340
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
+V + W+PQ DIL HPN+RLFITHGGI SL EA+ +P++GVPFFGDQ+ NM L
Sbjct: 341 HVMVSNWFPQPDILGHPNVRLFITHGGIHSLEEATYNALPIVGVPFFGDQHMNMRLAERN 400
Query: 147 GYALIEPIQTLTKQSFLKNAQTMLNDPR 174
G + LT++S L +L + +
Sbjct: 401 GIGKMVDNVDLTEESMLSAINEVLTNTK 428
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194880177|ref|XP_001974381.1| GG21117 [Drosophila erecta] gi|190657568|gb|EDV54781.1| GG21117 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +ET L+ F QLK + WK + ND +
Sbjct: 284 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQETTAQILKAFGQLKQQVIWKFE--NDSI-- 339
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L +P +GDQ+RN
Sbjct: 340 -GELPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCIPLYGDQHRNT 398
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 399 IKSVREGYARSLVFSKLTVDDLVRNIETLINDPQ 432
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195344840|ref|XP_002038984.1| GM17278 [Drosophila sechellia] gi|194134114|gb|EDW55630.1| GM17278 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +E L+ F QLK + WK + ND + +
Sbjct: 284 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTAQILKAFGQLKQQVIWKFE--NDSIGD 341
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L VP +GDQ+RN
Sbjct: 342 ---LPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNT 398
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 399 IKSVREGYARSLVFSKLTTDDLVRNIETLINDPQ 432
|
Source: Drosophila sechellia Species: Drosophila sechellia Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195484165|ref|XP_002090577.1| GE13191 [Drosophila yakuba] gi|194176678|gb|EDW90289.1| GE13191 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +E L+ F QLK + WK + ND + +
Sbjct: 284 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTAQILKAFGQLKQQVIWKFE--NDSIGD 341
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L VP +GDQ+RN
Sbjct: 342 ---LPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNT 398
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 399 IKSVREGYARSLVFSKLTTDDLVRNIETLINDPQ 432
|
Source: Drosophila yakuba Species: Drosophila yakuba Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66771225|gb|AAY54924.1| IP11804p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +E L+ F QLK + WK + ND + +
Sbjct: 191 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTALILKAFGQLKQQVIWKFE--NDSIGD 248
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L VP +GDQ+RN
Sbjct: 249 ---LPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNT 305
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 306 IKSVREGYARSLVFSKLTTDDLVRNIETLINDPQ 339
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|24584982|ref|NP_609882.1| CG10178, isoform A [Drosophila melanogaster] gi|386769830|ref|NP_001246079.1| CG10178, isoform B [Drosophila melanogaster] gi|22946754|gb|AAF53673.2| CG10178, isoform A [Drosophila melanogaster] gi|66771345|gb|AAY54984.1| IP11904p [Drosophila melanogaster] gi|383291559|gb|AFH03753.1| CG10178, isoform B [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +E L+ F QLK + WK + ND + +
Sbjct: 284 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTALILKAFGQLKQQVIWKFE--NDSIGD 341
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L VP +GDQ+RN
Sbjct: 342 ---LPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNT 398
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 399 IKSVREGYARSLVFSKLTTDDLVRNIETLINDPQ 432
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66771065|gb|AAY54844.1| IP11704p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +E L+ F QLK + WK + ND + +
Sbjct: 265 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTALILKAFGQLKQQVIWKFE--NDSIGD 322
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L VP +GDQ+RN
Sbjct: 323 ---LPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNT 379
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 380 IKSVREGYARSLVFSKLTTDDLVRNIETLINDPQ 413
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157126027|ref|XP_001654500.1| glucosyl/glucuronosyl transferases [Aedes aegypti] gi|108873426|gb|EAT37651.1| AAEL010386-PA, partial [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
Query: 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA 81
++Q D A G +Y S GS + L E + FL+VF +LK + WK + N P
Sbjct: 282 NIQSFMDNATDGVIYFSMGSNIKSKDLPIEKRDAFLKVFSKLKQKVLWKWEDDNLP---- 337
Query: 82 KTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV 141
PDNVF+Q W+PQ DILAHPN++LFITHGG+ S E+ GVPV+G+P FGDQY NM
Sbjct: 338 -GKPDNVFVQSWWPQDDILAHPNVKLFITHGGLLSTTESLYHGVPVIGIPVFGDQYLNMA 396
Query: 142 LLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
GY L +++ + +LNDP+
Sbjct: 397 KAERGGYGLSVAYAEISETKLSNAIEAILNDPQ 429
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193690713|ref|XP_001944218.1| PREDICTED: UDP-glucuronosyltransferase 1-9-like isoform 1 [Acyrthosiphon pisum] gi|328719522|ref|XP_003246783.1| PREDICTED: UDP-glucuronosyltransferase 1-9-like isoform 2 [Acyrthosiphon pisum] gi|328719524|ref|XP_003246784.1| PREDICTED: UDP-glucuronosyltransferase 1-9-like isoform 3 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ+ D ++ G +Y S GSVV L + G E F +L + WK++ ++ P++N
Sbjct: 274 TDLQEFIDGSEHGVIYFSLGSVVRMEDLPIAIQHGLKEGFGELPQKVLWKLE-SDRPIIN 332
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV +KW+PQ DI+ HPN++LFITHGG S ++EA+S G+PVLG P F DQ RN+
Sbjct: 333 ---LPKNVITRKWFPQYDIIRHPNVKLFITHGGNSGVIEATSAGIPVLGFPIFFDQPRNL 389
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
L +H G L TK+ F+ + +L+D R
Sbjct: 390 ELFKHWGSGLFVDYNNFTKEDFVCKIKRILSDQR 423
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 174 | ||||||
| FB|FBgn0032684 | 530 | CG10178 [Drosophila melanogast | 0.856 | 0.281 | 0.448 | 4.2e-29 | |
| FB|FBgn0040256 | 517 | Ugt86Dd "Ugt86Dd" [Drosophila | 0.844 | 0.284 | 0.401 | 1.1e-24 | |
| FB|FBgn0038886 | 537 | CG6475 [Drosophila melanogaste | 0.810 | 0.262 | 0.425 | 1.2e-23 | |
| FB|FBgn0051002 | 521 | CG31002 [Drosophila melanogast | 0.741 | 0.247 | 0.440 | 3e-23 | |
| FB|FBgn0040255 | 527 | Ugt86De "Ugt86De" [Drosophila | 0.798 | 0.263 | 0.388 | 3.2e-23 | |
| FB|FBgn0026315 | 537 | Ugt35a "UDP-glycosyltransferas | 0.844 | 0.273 | 0.368 | 7.2e-23 | |
| FB|FBgn0026314 | 516 | Ugt35b "UDP-glycosyltransferas | 0.850 | 0.286 | 0.396 | 1.7e-22 | |
| FB|FBgn0027070 | 517 | CG17322 [Drosophila melanogast | 0.844 | 0.284 | 0.392 | 2.9e-22 | |
| FB|FBgn0040259 | 528 | Ugt86Da "Ugt86Da" [Drosophila | 0.844 | 0.278 | 0.368 | 6.6e-22 | |
| MGI|MGI:2146055 | 523 | Ugt3a1 "UDP glycosyltransferas | 0.798 | 0.265 | 0.401 | 8.2e-22 |
| FB|FBgn0032684 CG10178 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 327 (120.2 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 69/154 (44%), Positives = 90/154 (58%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+DLQ D A G +Y S GS V T L +E L+ F QLK + WK + ND + +
Sbjct: 284 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTALILKAFGQLKQQVIWKFE--NDSIGD 341
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
LP NV I+KW PQ DILAHPN++LFITHGGI E GVP+L VP +GDQ+RN
Sbjct: 342 ---LPSNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNT 398
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ GYA LT ++N +T++NDP+
Sbjct: 399 IKSVREGYARSLVFSKLTTDDLVRNIETLINDPQ 432
|
|
| FB|FBgn0040256 Ugt86Dd "Ugt86Dd" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 61/152 (40%), Positives = 89/152 (58%)
Query: 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA 81
D++Q + + G +Y S GS V L +ET+ L+ F +LK + WK + D +
Sbjct: 275 DIKQFIEGSPHGVIYFSMGSNVKSKDLPQETRDTLLKTFAKLKQRVLWKFE---DDDMPG 331
Query: 82 KTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV 141
K P NV I+KWYPQ DILAHPN++LFI+HGG+ S E+ G P+LG+P F DQ+ N+
Sbjct: 332 K--PANVLIKKWYPQPDILAHPNVKLFISHGGLLSSTESVYFGKPILGLPCFYDQHMNVQ 389
Query: 142 LLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173
+ G+ L + L ++ K QT+L DP
Sbjct: 390 RAQRVGFGLGLDLNNLKQEDLEKAIQTLLTDP 421
|
|
| FB|FBgn0038886 CG6475 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%)
Query: 28 DAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDN 87
D A+ G +Y S GS V + E FL+VF LK + WK + +D + N LPDN
Sbjct: 302 DNAEHGAIYFSLGSQVRSADMPAEKLQIFLDVFASLKQRVLWKFE--DDQLPN---LPDN 356
Query: 88 VFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRG 147
V ++KW PQ DILAHPN+++FI HGG+ + EA VPVLG+PF+ DQ N+ + G
Sbjct: 357 VKVEKWLPQADILAHPNVKVFIAHGGLFGMQEAVYHAVPVLGMPFYFDQDINIKAGQAAG 416
Query: 148 YALIEPIQTLTKQSFLKNA-QTMLNDPR 174
YA+ +T++K LK+A +L DP+
Sbjct: 417 YAIGLDYRTISKDQ-LKSALHALLKDPK 443
|
|
| FB|FBgn0051002 CG31002 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 59/134 (44%), Positives = 80/134 (59%)
Query: 29 AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88
A + G +Y S G+ V LSE+ + LE F L I WK + D +L K P NV
Sbjct: 283 AGESGVIYFSLGTNVKSKSLSEDRRKVLLETFASLPQRIVWKFE---DELLPGK--PPNV 337
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY 148
FI KW+PQ ILAHPN++LFITHGG+ S +E+ G P+LG+P DQ+RNM +R G
Sbjct: 338 FISKWFPQQAILAHPNVKLFITHGGLLSTIESIHHGKPMLGLPCLFDQFRNMDHVRQVGL 397
Query: 149 ALIEPIQTLTKQSF 162
L+ I+ +T + F
Sbjct: 398 GLVLNIKQMTSEEF 411
|
|
| FB|FBgn0040255 Ugt86De "Ugt86De" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 56/144 (38%), Positives = 83/144 (57%)
Query: 29 AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88
A + G +Y S G+ V LS++ + ++ F L I WK D D + + +P NV
Sbjct: 290 AGEHGVIYFSLGTNVRSRNLSKDRRKILIDTFASLPQRILWKFDA--DELSD---VPSNV 344
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY 148
I W+PQ DILAHPN++LFITHGG+ S +E GVP+LG+PFF DQ+RNM ++ +G
Sbjct: 345 LISPWFPQQDILAHPNVKLFITHGGLQSTVECIHRGVPMLGLPFFYDQFRNMEHIKAQGI 404
Query: 149 ALIEPIQTLTKQSFLKNAQTMLND 172
L+ + +T F +L +
Sbjct: 405 GLVLNYRDMTSDEFKDTIHQLLTE 428
|
|
| FB|FBgn0026315 Ugt35a "UDP-glycosyltransferase 35a" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 271 (100.5 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 56/152 (36%), Positives = 85/152 (55%)
Query: 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA 81
+L + + ++ G +Y S GS + L T+ ++ F + + WK + D L
Sbjct: 288 ELSEFVEQSEKGVIYFSMGSNIKSKDLPPSTRKMLMQTFASVPQRVLWKFE---DDQLPE 344
Query: 82 KTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV 141
K PDNVFI KW+PQ DILAHPN++LFITHGG+ S +E+ G P+LG+P F DQ+ N+
Sbjct: 345 K--PDNVFISKWFPQPDILAHPNVKLFITHGGLLSTIESIYFGKPILGLPIFYDQHLNVQ 402
Query: 142 LLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173
+ GY L I ++ Q +L++P
Sbjct: 403 RAKQVGYGLSADIWSVNATELTPLIQELLSNP 434
|
|
| FB|FBgn0026314 Ugt35b "UDP-glycosyltransferase 35b" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 61/154 (39%), Positives = 86/154 (55%)
Query: 22 DLQQRADAA-KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
DL++ + + G +Y S GS V L + K L+ F L + WK + D L
Sbjct: 277 DLEEFIQGSGEHGVIYFSLGSNVLSKDLPADRKDLILKTFASLPQRVLWKFE---DDKLP 333
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
K P NVFI KW+PQ DILAHP ++LFITHGG+ S +E+ G PVLG+PFF DQ+ N+
Sbjct: 334 GK--PSNVFISKWFPQPDILAHPKVKLFITHGGLLSTIESIHHGKPVLGLPFFYDQFLNV 391
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
G+ L T+T+Q + + +L +PR
Sbjct: 392 RRATQAGFGLGLDHTTMTQQELKETIEILLKEPR 425
|
|
| FB|FBgn0027070 CG17322 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 265 (98.3 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 60/153 (39%), Positives = 89/153 (58%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
SDLQ+ D A G + +S+GS + LS + G ++ +L+ + WK + ND + N
Sbjct: 278 SDLQKILDNAPKGVILISWGSQLKACSLSAARRDGIVKAIGRLEQEVIWKYE--NDTLPN 335
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
P N+ I+KW PQ DILAHPNL++F++HGG+ EA S VP++GVP +GDQ N+
Sbjct: 336 K---PPNLHIRKWLPQRDILAHPNLKVFMSHGGLMGTTEAVSSAVPIVGVPIYGDQSLNI 392
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173
L RG AL ++ L + + + A T DP
Sbjct: 393 AALVQRGMALQLELKKLDENTVYE-ALTKALDP 424
|
|
| FB|FBgn0040259 Ugt86Da "Ugt86Da" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 262 (97.3 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 56/152 (36%), Positives = 81/152 (53%)
Query: 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA 81
D+ + + A+ G +Y S GS + L E + ++ F QLK + WK + T+ P
Sbjct: 280 DILEFIEGAEHGVIYFSMGSNLKSKTLPLEKRQALIDTFAQLKQRVLWKFEDTDLP---G 336
Query: 82 KTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV 141
K P NVFI W+PQ DILAH N+ FITHGG+ S E+ P +G+P FGDQ+ NM
Sbjct: 337 K--PANVFISDWFPQDDILAHDNVLAFITHGGLLSTTESIYHRKPFVGIPIFGDQFLNMA 394
Query: 142 LLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173
GY + + L+ L Q ++N+P
Sbjct: 395 RAEQNGYGVTVHYEELSSAKLLAAIQKIINNP 426
|
|
| MGI|MGI:2146055 Ugt3a1 "UDP glycosyltransferases 3 family, polypeptide A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 261 (96.9 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 57/142 (40%), Positives = 82/142 (57%)
Query: 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK 92
GFV ++ GSVV + E K F L + W ++ P +L NV I
Sbjct: 294 GFVLVALGSVVSMIQSKEIIK-EMNSAFAHLPQGVLWTCKSSHWP--KDVSLAPNVKIMD 350
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIE 152
W PQ D+LAHP++RLF+THGG++S+MEA GVP++G+PFFGDQ NMV + + +
Sbjct: 351 WLPQIDLLAHPSIRLFVTHGGMNSVMEAVHHGVPMVGIPFFGDQPENMVRVEAKNLGVSI 410
Query: 153 PIQTLTKQSFLKNAQTMLNDPR 174
+QTL +SFL + ++ D R
Sbjct: 411 QLQTLKAESFLLTMKEVIEDQR 432
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 174 | |||
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 4e-33 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 2e-23 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 3e-16 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 9e-15 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 1e-11 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 5e-11 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 7e-10 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 2e-09 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 8e-09 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 1e-08 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 2e-08 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 3e-08 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 4e-08 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 4e-08 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 3e-07 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 9e-07 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 1e-06 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 4e-06 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 9e-06 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 2e-05 | |
| pfam04101 | 167 | pfam04101, Glyco_tran_28_C, Glycosyltransferase fa | 4e-05 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 5e-05 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 8e-05 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 3e-04 | |
| COG0707 | 357 | COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acety | 5e-04 | |
| TIGR00661 | 321 | TIGR00661, MJ1255, conserved hypothetical protein | 0.001 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 0.003 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 4e-33
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
L++ + + G VY+SFGS +D + E L FK+L + WK D +
Sbjct: 285 DYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYD----GEVE 340
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
A LP NV QKW+PQ +L H N++ F+T GG+ S EA VP++G+P GDQ+ N
Sbjct: 341 AINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYN 399
|
Length = 507 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 2e-23
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK 92
G V S GS+V + + EE Q+ + W+ D T TL N + K
Sbjct: 277 GVVVFSLGSMV--SNIPEEKANEIASALAQIPQKVLWRFDGTKPS-----TLGRNTRLVK 329
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIE 152
W PQ D+L HP R F+TH G + + EA GVP++G+P FGDQ N + +G A+
Sbjct: 330 WLPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTL 389
Query: 153 PIQTLTKQSFLKNAQTMLNDP 173
+ T+T + L +T++NDP
Sbjct: 390 NVLTMTSEDLLNALKTVINDP 410
|
Length = 500 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 3e-16
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT----LPDNVFI 90
VY+S G+V + +L LE L ++ ++ + A+ +PDNV +
Sbjct: 240 VYVSLGTVGNAVELLAI----VLEALADLD----VRVIVS---LGGARDTLVNVPDNVIV 288
Query: 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYAL 150
+ PQ ++L + I HGG + EA GVP++ +P DQ N + G +
Sbjct: 289 ADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGI 346
Query: 151 IEPIQTLTKQSFLKNA-QTMLNDP 173
P + LT++ L+ A +L D
Sbjct: 347 ALPFEELTEER-LRAAVNEVLADD 369
|
Length = 406 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 9e-15
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDNVFIQKW 93
V +S G+V + T +E F+ L + + DP L LP NV +++W
Sbjct: 228 VLISLGTVFNNQPSFYRT---CVEAFRDLDWHVVLSVGRGVDPADLG--ELPPNVEVRQW 282
Query: 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEP 153
PQ +IL + FITHGG++S MEA GVP++ VP DQ + G P
Sbjct: 283 VPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340
Query: 154 IQTLTKQSFLKNAQTMLNDPR 174
+ +T + + +L+DPR
Sbjct: 341 PEEVTAEKLREAVLAVLSDPR 361
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-11
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 35 VYMSFGSVVDPTKLS-EETKLGFLEVFKQLKLPIFWKI-----DITNDPVLNAKTLPDNV 88
VY+SFG+VV + +E G L + W + D +P + LP+
Sbjct: 280 VYISFGTVVYLKQEQIDEIAYGVLNS----GVSFLWVMRPPHKDSGVEPHV----LPEEF 331
Query: 89 F--------IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
I +W PQ +LAHP++ F+TH G +S MEA S GVPV+ P +GDQ +
Sbjct: 332 LEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDA 391
Query: 141 VLL 143
V L
Sbjct: 392 VYL 394
|
Length = 480 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 5e-11
Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 35 VYMSFGSVV--DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK 92
VY+ FGS+V DP L+ +E L I L A+ LPDNV +
Sbjct: 242 VYVGFGSMVVRDPEALARL----DVEAVATLGQRA---ILSLGWGGLGAEDLPDNVRVVD 294
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIE 152
+ P +L P + HGG + A GVP L VPFFGDQ + G
Sbjct: 295 FVPHDWLL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL 352
Query: 153 PIQTLTKQSFLKNAQTMLNDP 173
+ LT + + +L+ P
Sbjct: 353 DPRELTAERLAAALRRLLDPP 373
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 7e-10
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 30 AKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKI----DITNDPVLNAKTLP 85
A+ VY+SFGS+++ + ET + K +P W I N VL
Sbjct: 267 ARSSVVYISFGSMLESLENQVET---IAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKE 323
Query: 86 DNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
+ +W PQ IL+H + F+TH G +S +E GVPV+ P + DQ + LL
Sbjct: 324 GQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLL 381
|
Length = 456 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 2e-09
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 92 KWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN-MVLLRHRGYA 149
W PQ +ILAH + F+TH G +S++E+ GVP+ P + +Q+ N L+ G A
Sbjct: 345 TWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVA 403
|
Length = 480 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 8e-09
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 35 VYMSFGSVVDPTKLS-EETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT---------- 83
+Y+SFG++V+ +K EE +E K P W I T+ AK
Sbjct: 264 IYVSFGTMVELSKKQIEELARALIEG----KRPFLWVI--TDKLNREAKIEGEEETEIEK 317
Query: 84 -------LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQ 136
L + I W Q ++L H + F+TH G SS +E+ LGVPV+ P + DQ
Sbjct: 318 IAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQ 377
Query: 137 YRNMVLL 143
N LL
Sbjct: 378 PANAKLL 384
|
Length = 455 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-08
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTL----PD 86
+G VY++FGS+ + E + F L W + + + L L D
Sbjct: 263 QGSVVYIAFGSMAKLSSEQMEEIASAISNFSYL-----WVVRASEESKLPPGFLETVDKD 317
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
+ KW PQ +L++ + F+TH G +S ME SLGVP++ +P + DQ N
Sbjct: 318 KSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMN 370
|
Length = 449 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 2e-08
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 88 VFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
+ + +W PQ +IL+H ++ F++H G SS++E+ + GVP++ P + +Q+ N LL
Sbjct: 337 LVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLL 392
|
Length = 470 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 3e-08
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLP-IFWKIDITNDPVLNAKTLPDNVFI 90
G M V++ + + FL V + + W I + P +K + +I
Sbjct: 272 GSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEW---IESLPKEFSKIISGRGYI 328
Query: 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
KW PQ ++L+HP + F +H G +S +E+ GVP++ PF DQ N
Sbjct: 329 VKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVN 377
|
Length = 451 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 4e-08
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
I+ W PQ IL+H + F+TH G +S++E GVP+L P DQ+ N LL
Sbjct: 347 IRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLL 400
|
Length = 477 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 4e-08
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
+ W PQ +ILAH + F+TH G SS +E+ GVP++ P F +Q N LL
Sbjct: 342 VPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALL 395
|
Length = 481 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 88 VFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
+ I+ W PQ IL+HP + F+TH G +S +E GVP++ P F +Q+ N L+
Sbjct: 346 LLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLI 401
|
Length = 491 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 9e-07
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLP---IFWKIDITNDPVLNAKTLPDN- 87
+Y+SFGSV E E+ L+ W + + + LP+
Sbjct: 285 DSVIYLSFGSV---ASFKNEQ---LFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGF 338
Query: 88 --------VFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
+ I+ W PQ IL H F+TH G +SL+E + G+P++ P +Q+ N
Sbjct: 339 EERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYN 398
Query: 140 MVLL 143
L+
Sbjct: 399 EKLV 402
|
Length = 482 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 1e-06
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
++T + ++ W PQ +L H + F+TH G +S++EA GVP++ P + +Q N
Sbjct: 329 SRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNR 388
Query: 141 VLL 143
V++
Sbjct: 389 VMI 391
|
Length = 451 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 4e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 72 DITNDPVLNAKTLPDNV----FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPV 127
++TND +L L D V I W PQ +ILAH + F++H G +S++E+ GVP+
Sbjct: 315 EVTNDDLLPEGFL-DRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPI 373
Query: 128 LGVPFFGDQYRNMVLL 143
+ P + +Q N L+
Sbjct: 374 VTWPMYAEQQLNAFLM 389
|
Length = 468 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 9e-06
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN---MV 141
W PQ +LA P + F+TH G +S++E+ GVP+ P + +Q N MV
Sbjct: 349 WAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMV 400
|
Length = 481 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-05
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
W PQ +ILAH + F++H G +S++E+ GVP+ P + +Q N
Sbjct: 347 WAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLN 393
|
Length = 475 |
| >gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 4e-05
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 107 LFITHGGISSLMEASSLGVPVLGVP----FFGDQYRNMVLLRHRGYALIEPIQTLT 158
L I+ G ++ E +LG P + VP Q N + L G AL+ + LT
Sbjct: 75 LVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAGAALVLLQKELT 130
|
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 5e-05
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 35 VYMSFGSVVDPTKLSEETKLGF-LEVFKQLKLPIFWKIDIT---NDPVLNAKTLPDNVFI 90
+Y+SFGS V P S L LE + P W ++ P + + +
Sbjct: 276 IYISFGSWVSPIGESNVRTLALALEASGR---PFIWVLNPVWREGLPPGYVERVSKQGKV 332
Query: 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
W PQ ++L H + ++TH G +S MEA +L P GDQ+ N
Sbjct: 333 VSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVN 381
|
Length = 448 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRN 139
W Q +L H ++ F TH G +S +EA GVP+L P F DQ N
Sbjct: 330 WCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLN 376
|
Length = 459 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 3e-04
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLG-VPVLGVPFFGDQYRNMVLLRHRGYAL 150
W PQ IL+H ++ F+TH G +S++E G V +L P +Q N LL + L
Sbjct: 346 WVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLIL-FPVLNEQGLNTRLLHGKKLGL 403
|
Length = 472 |
| >gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 5e-04
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 107 LFITHGGISSLMEASSLGVPVLGVPF----FGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162
L I+ G ++ E +LGVP + VP+ G Q N L G AL+ LT +
Sbjct: 255 LVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKL 314
Query: 163 LKNAQTMLNDP 173
+ +L++P
Sbjct: 315 AELILRLLSNP 325
|
Length = 357 |
| >gnl|CDD|233077 TIGR00661, MJ1255, conserved hypothetical protein | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.001
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 104 NLRLFITHGGISSLMEASSLGVPVLGVPFFG--DQYRNMVLLRHRGYA 149
N L ITHGG S + EA SLG P++ +P G +Q N V L G
Sbjct: 247 NAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCG 294
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases [Hypothetical proteins, Conserved]. Length = 321 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 37.0 bits (85), Expect = 0.003
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
W Q IL+HP++ F++H G S+ E+ ++ VP GDQ N LL
Sbjct: 324 WVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLL 374
|
Length = 453 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 174 | |||
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 99.98 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.98 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 99.97 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 99.97 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 99.97 | |
| PLN02208 | 442 | glycosyltransferase family protein | 99.97 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 99.97 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 99.97 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 99.97 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 99.97 | |
| PLN02764 | 453 | glycosyltransferase family protein | 99.97 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 99.97 | |
| PLN00414 | 446 | glycosyltransferase family protein | 99.97 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 99.97 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 99.97 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 99.97 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 99.97 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 99.97 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.97 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 99.96 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 99.96 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.95 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 99.95 | |
| KOG1192|consensus | 496 | 99.95 | ||
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.95 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.8 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.8 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.8 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.79 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.74 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.54 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.5 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.46 | |
| KOG3349|consensus | 170 | 99.45 | ||
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.41 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.34 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.26 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.25 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.24 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.24 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.06 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 99.05 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.92 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.63 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 98.59 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 98.49 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 98.39 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.37 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 98.35 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.33 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 98.3 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 98.26 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 98.25 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 98.22 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 98.21 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 98.18 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 98.13 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.1 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 98.1 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.1 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.09 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 98.07 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.05 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 98.04 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 98.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 97.96 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 97.95 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 97.93 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 97.92 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 97.91 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.87 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 97.87 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 97.85 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 97.85 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 97.84 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 97.82 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 97.77 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 97.77 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 97.75 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 97.72 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.7 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.67 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 97.64 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 97.62 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 97.61 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 97.6 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.6 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 97.54 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 97.54 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 97.46 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 97.44 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 97.43 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 97.43 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 97.42 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 97.4 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 97.39 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.3 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.28 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 97.27 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 97.26 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.25 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 97.09 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 96.75 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 96.68 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 96.63 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 96.6 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.51 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.44 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 96.39 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 96.35 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 96.29 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 96.22 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 96.11 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 95.99 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 95.95 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 95.83 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.69 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 95.6 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.59 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 95.59 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 95.55 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 95.49 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 95.38 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 95.35 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 94.97 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 94.58 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 94.52 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 94.48 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 94.43 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 94.11 | |
| PLN00142 | 815 | sucrose synthase | 94.06 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 94.05 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 93.91 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 93.68 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 93.62 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 93.36 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 93.3 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 93.09 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 93.04 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 92.99 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 92.65 | |
| KOG4626|consensus | 966 | 92.39 | ||
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 92.25 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 92.24 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 92.23 | |
| PLN02316 | 1036 | synthase/transferase | 91.75 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 91.25 | |
| PRK02155 | 291 | ppnK NAD(+)/NADH kinase family protein; Provisiona | 91.23 | |
| TIGR00725 | 159 | conserved hypothetical protein, DprA/Smf-related, | 90.53 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 90.39 | |
| TIGR00730 | 178 | conserved hypothetical protein, DprA/Smf-related, | 89.46 | |
| PRK14077 | 287 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 88.79 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 88.33 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 88.21 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 87.79 | |
| PRK03372 | 306 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 87.71 | |
| PRK01231 | 295 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 87.59 | |
| PRK14075 | 256 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 86.98 | |
| PRK04885 | 265 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 86.74 | |
| PRK01911 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 86.63 | |
| PLN02929 | 301 | NADH kinase | 86.34 | |
| PRK04539 | 296 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 86.09 | |
| PRK03378 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 85.9 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.02 | |
| PRK02649 | 305 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 83.68 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 83.01 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 82.67 | |
| cd08181 | 357 | PPD-like 1,3-propanediol dehydrogenase-like (PPD). | 82.57 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 80.77 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 80.14 |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=244.11 Aligned_cols=165 Identities=29% Similarity=0.512 Sum_probs=147.1
Q ss_pred ccCccccCCcccc------CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc
Q psy16939 5 LNRAVKLCSMCFI------DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV 78 (174)
Q Consensus 5 ~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~ 78 (174)
++.++..+|++.. ++++++.+|++..++++||||+||...+..++.+.++.+++++++.+++|||..++...+.
T Consensus 263 ~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~ 342 (507)
T PHA03392 263 VPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAI 342 (507)
T ss_pred CCCCeeeecccccCCCCCCCCCHHHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcc
Confidence 3456666677532 4688999999987778999999998765457899999999999999999999998654331
Q ss_pred ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCC
Q psy16939 79 LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLT 158 (174)
Q Consensus 79 ~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~ 158 (174)
..|+|+++.+|+||.++|+|+++++||||||.||++||+++|||+|++|.++||+.||++++++|+|+.++..+++
T Consensus 343 ----~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t 418 (507)
T PHA03392 343 ----NLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVS 418 (507)
T ss_pred ----cCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHHhhcCC
Q psy16939 159 KQSFLKNAQTMLNDP 173 (174)
Q Consensus 159 ~~~l~~al~~ll~~~ 173 (174)
.++|.++++++++|+
T Consensus 419 ~~~l~~ai~~vl~~~ 433 (507)
T PHA03392 419 AAQLVLAIVDVIENP 433 (507)
T ss_pred HHHHHHHHHHHhCCH
Confidence 999999999999875
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=243.96 Aligned_cols=149 Identities=40% Similarity=0.690 Sum_probs=128.3
Q ss_pred CChHHHHHHHhcC-CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCc
Q psy16939 18 DGLSDLQQRADAA-KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 96 (174)
++++++..|++.. ++++|||||||... .++.+..+++++++++.+++|||.+.+.... .+++|+++.+|+||
T Consensus 261 ~l~~~~~~~~~~~~~~~vv~vsfGs~~~--~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~-----~l~~n~~~~~W~PQ 333 (500)
T PF00201_consen 261 PLPEELWNFLDSSGKKGVVYVSFGSIVS--SMPEEKLKEIAEAFENLPQRFIWKYEGEPPE-----NLPKNVLIVKWLPQ 333 (500)
T ss_dssp TCHHHHHHHTSTTTTTEEEEEE-TSSST--T-HHHHHHHHHHHHHCSTTEEEEEETCSHGC-----HHHTTEEEESS--H
T ss_pred ccccccchhhhccCCCCEEEEecCcccc--hhHHHHHHHHHHHHhhCCCcccccccccccc-----cccceEEEeccccc
Confidence 6889999999984 47999999999975 3577779999999999999999999874433 56789999999999
Q ss_pred hhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 97 TDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 97 ~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.++|+||++++||||||+||+.||+++|||+|++|+++||+.||.++++.|+|+.++.++++.+++.++++++|+|+
T Consensus 334 ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~ 410 (500)
T PF00201_consen 334 NDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLENP 410 (500)
T ss_dssp HHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHSH
T ss_pred hhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=219.56 Aligned_cols=150 Identities=22% Similarity=0.385 Sum_probs=129.6
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-C--------Ccc-ccccCCCCCEE
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-N--------DPV-LNAKTLPDNVF 89 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~--------~~~-~~~~~~~~nv~ 89 (174)
+++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||++++. . +++ |.++.....+.
T Consensus 266 ~~~~~wLd~~~~~sVvyvsfGS~~~---l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~v 342 (472)
T PLN02670 266 VRIKEWLDKQRVNSVVYVALGTEAS---LRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMI 342 (472)
T ss_pred HHHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeE
Confidence 46889999987 8999999999975 799999999999999999999999752 1 111 11111223377
Q ss_pred EeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCC----CCCHHHHHHH
Q psy16939 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ----TLTKQSFLKN 165 (174)
Q Consensus 90 ~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~----~~~~~~l~~a 165 (174)
+.+|+||.++|.|+++.+||||||+||++|++++|||+|++|+++||+.||+++++.|+|+.+... .++.++++++
T Consensus 343 v~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~a 422 (472)
T PLN02670 343 HVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAES 422 (472)
T ss_pred EeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999998643 3789999999
Q ss_pred HHHhhcCC
Q psy16939 166 AQTMLNDP 173 (174)
Q Consensus 166 l~~ll~~~ 173 (174)
++++|.++
T Consensus 423 v~~vm~~~ 430 (472)
T PLN02670 423 VRLAMVDD 430 (472)
T ss_pred HHHHhcCc
Confidence 99999764
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=217.21 Aligned_cols=147 Identities=20% Similarity=0.359 Sum_probs=130.9
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---------Ccc-ccccCCCCCEEE
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---------DPV-LNAKTLPDNVFI 90 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---------~~~-~~~~~~~~nv~~ 90 (174)
++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||+++... +++ |.+ ..++|..+
T Consensus 253 ~~~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~e-r~~~~g~v 328 (451)
T PLN02410 253 SCIEWLNKQKKNSVIFVSLGSLAL---MEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSK-IISGRGYI 328 (451)
T ss_pred HHHHHHHhCCCCcEEEEEcccccc---CCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHH-hccCCeEE
Confidence 4679999987 8999999999986 7899999999999999999999997421 232 322 35678899
Q ss_pred eecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc-CceeEecCCCCCHHHHHHHHHHh
Q psy16939 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR-GYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 91 ~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~-G~g~~l~~~~~~~~~l~~al~~l 169 (174)
.+|+||.++|.|+++++||||||+||+.|++++|||+|++|+++||+.||+++++. |+|+.+. ..++.++|.++++++
T Consensus 329 ~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~v~~av~~l 407 (451)
T PLN02410 329 VKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDRGAVERAVKRL 407 (451)
T ss_pred EccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876 9999996 678999999999999
Q ss_pred hcCC
Q psy16939 170 LNDP 173 (174)
Q Consensus 170 l~~~ 173 (174)
|.++
T Consensus 408 m~~~ 411 (451)
T PLN02410 408 MVEE 411 (451)
T ss_pred HcCC
Confidence 9775
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=216.65 Aligned_cols=150 Identities=21% Similarity=0.355 Sum_probs=130.8
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC------------Cc-cccccCCCC
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN------------DP-VLNAKTLPD 86 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~------------~~-~~~~~~~~~ 86 (174)
.++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||+++... ++ .|.++....
T Consensus 258 ~~c~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~ 334 (451)
T PLN03004 258 VSCLNWLDSQPEKSVVFLCFGSLGL---FSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDK 334 (451)
T ss_pred hHHHHHHHhCCCCceEEEEeccccc---CCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCC
Confidence 35889999987 8999999999965 7999999999999999999999998531 11 122223347
Q ss_pred CEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCC---CCCHHHH
Q psy16939 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQ---TLTKQSF 162 (174)
Q Consensus 87 nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~---~~~~~~l 162 (174)
|+.+.+|+||.++|.|+++.+||||||+||+.|++++|||+|++|+++||+.||+++++ .|+|+.++.+ ..+.++|
T Consensus 335 g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l 414 (451)
T PLN03004 335 GMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEV 414 (451)
T ss_pred cEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999985 7999999743 4699999
Q ss_pred HHHHHHhhcCC
Q psy16939 163 LKNAQTMLNDP 173 (174)
Q Consensus 163 ~~al~~ll~~~ 173 (174)
.++++++|+++
T Consensus 415 ~~av~~vm~~~ 425 (451)
T PLN03004 415 EKRVQEIIGEC 425 (451)
T ss_pred HHHHHHHhcCH
Confidence 99999999764
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=215.74 Aligned_cols=162 Identities=22% Similarity=0.303 Sum_probs=135.4
Q ss_pred cccCCccccC-----ChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-------
Q psy16939 9 VKLCSMCFID-----GLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN------- 75 (174)
Q Consensus 9 ~~~~g~~~~~-----~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~------- 75 (174)
+..+||.... .++++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||++++..
T Consensus 234 v~~VGPl~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~---l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~ 310 (481)
T PLN02992 234 VYPIGPLCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGS---LSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSA 310 (481)
T ss_pred eEEecCccCCcCCCcchHHHHHHHHcCCCCceEEEeeccccc---CCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccc
Confidence 4446776432 2346899999987 8999999999965 8999999999999999999999996310
Q ss_pred ----------------Ccc-ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHH
Q psy16939 76 ----------------DPV-LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYR 138 (174)
Q Consensus 76 ----------------~~~-~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~ 138 (174)
+++ |.++....++.+.+|+||.++|.|+++.+||||||+||+.|++++|||+|++|+++||+.
T Consensus 311 ~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~ 390 (481)
T PLN02992 311 YFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNM 390 (481)
T ss_pred cccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHH
Confidence 111 111122346899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HcCceeEecCC--CCCHHHHHHHHHHhhcCC
Q psy16939 139 NMVLLR-HRGYALIEPIQ--TLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 139 na~~l~-~~G~g~~l~~~--~~~~~~l~~al~~ll~~~ 173 (174)
||++++ ++|+|+.++.. .++.++|.++++++|.++
T Consensus 391 na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 391 NAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEE 428 (481)
T ss_pred HHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC
Confidence 999995 89999999753 489999999999999764
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=218.87 Aligned_cols=148 Identities=23% Similarity=0.395 Sum_probs=128.0
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-----------------Ccc-cc
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-----------------DPV-LN 80 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-----------------~~~-~~ 80 (174)
++++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||++++.. +++ +.
T Consensus 261 ~~~~~~wLd~~~~~svvyvsfGS~~~---~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 337 (481)
T PLN02554 261 QSEILRWLDEQPPKSVVFLCFGSMGG---FSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFL 337 (481)
T ss_pred chHHHHHHhcCCCCcEEEEecccccc---CCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHH
Confidence 457999999987 7899999999855 7899999999999999999999987521 121 11
Q ss_pred ccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHH-HHHHcCceeEecC-----
Q psy16939 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV-LLRHRGYALIEPI----- 154 (174)
Q Consensus 81 ~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~-~l~~~G~g~~l~~----- 154 (174)
+ ..++|..+.+|+||.++|.|+++++||||||+||+.|++++|||||++|+++||+.||+ +++++|+|+.+..
T Consensus 338 ~-r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~ 416 (481)
T PLN02554 338 D-RTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGD 416 (481)
T ss_pred H-HhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccccc
Confidence 1 14567888999999999999999999999999999999999999999999999999995 5788999999853
Q ss_pred ------CCCCHHHHHHHHHHhhc
Q psy16939 155 ------QTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 155 ------~~~~~~~l~~al~~ll~ 171 (174)
..++.+++.++++++|.
T Consensus 417 ~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 417 LLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred ccccccCeEcHHHHHHHHHHHhc
Confidence 35799999999999996
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=213.16 Aligned_cols=152 Identities=17% Similarity=0.247 Sum_probs=128.8
Q ss_pred ChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC--------CCcc-ccccCCCCCE
Q psy16939 19 GLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT--------NDPV-LNAKTLPDNV 88 (174)
Q Consensus 19 ~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~--------~~~~-~~~~~~~~nv 88 (174)
+++++.+|++..+ +++|||||||... ++.+.+.+++.+++..+.+|+|..+.. .+++ |.++....|+
T Consensus 237 ~~~~~~~wLd~~~~~sVvyvSfGS~~~---l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~ 313 (442)
T PLN02208 237 LEEQWSHFLSGFPPKSVVFCSLGSQII---LEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGV 313 (442)
T ss_pred CHHHHHHHHhcCCCCcEEEEecccccc---CCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCc
Confidence 4678999999987 8999999999985 788889999888877777777776632 1121 2111223688
Q ss_pred EEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCCC---CCHHHHHH
Q psy16939 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQT---LTKQSFLK 164 (174)
Q Consensus 89 ~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~~---~~~~~l~~ 164 (174)
.+.+|+||.++|.|+++.+||||||+||++|++++|||+|++|+++||+.||+++++ +|+|+.++.++ ++.++|.+
T Consensus 314 ~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ 393 (442)
T PLN02208 314 VWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSN 393 (442)
T ss_pred EeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHH
Confidence 888999999999999999999999999999999999999999999999999998876 89999997554 89999999
Q ss_pred HHHHhhcCC
Q psy16939 165 NAQTMLNDP 173 (174)
Q Consensus 165 al~~ll~~~ 173 (174)
+++++|+++
T Consensus 394 ai~~~m~~~ 402 (442)
T PLN02208 394 AIKSVMDKD 402 (442)
T ss_pred HHHHHhcCC
Confidence 999999764
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=214.19 Aligned_cols=147 Identities=21% Similarity=0.373 Sum_probs=128.4
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC------Ccc-ccccCCCCCEEEee
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN------DPV-LNAKTLPDNVFIQK 92 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~------~~~-~~~~~~~~nv~~~~ 92 (174)
+++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||+++... +++ +.+ ..++|..+.+
T Consensus 263 ~~~~~WLd~~~~~sVVyvSfGS~~~---~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~e-r~~~~g~i~~ 338 (468)
T PLN02207 263 DELMKWLDDQPEASVVFLCFGSMGR---LRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLD-RVSGRGMICG 338 (468)
T ss_pred hHHHHHHhcCCCCcEEEEEeccCcC---CCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHh-hcCCCeEEEE
Confidence 57999999987 7999999999875 7899999999999999999999998522 121 222 2567889999
Q ss_pred cCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEec------C-CCCCHHHHHH
Q psy16939 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEP------I-QTLTKQSFLK 164 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~------~-~~~~~~~l~~ 164 (174)
|+||.++|.|+++.+||||||+||+.|++++|||||++|+++||+.||+++++ +|+|+.+. . +..+.++|.+
T Consensus 339 W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~ 418 (468)
T PLN02207 339 WSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIET 418 (468)
T ss_pred eCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999998877 89999763 1 2348999999
Q ss_pred HHHHhhc
Q psy16939 165 NAQTMLN 171 (174)
Q Consensus 165 al~~ll~ 171 (174)
+|+++|.
T Consensus 419 av~~vm~ 425 (468)
T PLN02207 419 AIRCVMN 425 (468)
T ss_pred HHHHHHh
Confidence 9999996
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=212.36 Aligned_cols=149 Identities=25% Similarity=0.403 Sum_probs=127.6
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC----------------CccccccC
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN----------------DPVLNAKT 83 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~----------------~~~~~~~~ 83 (174)
.++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||++++.. .+.+.+ .
T Consensus 249 ~~~~~wLd~~~~~sVvyvsfGS~~~---l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e-~ 324 (455)
T PLN02152 249 SSYTLWLDSKTESSVIYVSFGTMVE---LSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRH-E 324 (455)
T ss_pred hHHHHHhhCCCCCceEEEEeccccc---CCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHH-h
Confidence 36999999987 8999999999985 7999999999999999999999987521 011211 2
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEec--CC-CCCH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEP--IQ-TLTK 159 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~--~~-~~~~ 159 (174)
.++|..+.+|+||.++|.|+++.+||||||+||++|++++|||++++|+++||+.||+++++ .|+|+.+. .+ ..+.
T Consensus 325 ~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 325 LEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred ccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 56788999999999999999999999999999999999999999999999999999999998 36666553 33 3589
Q ss_pred HHHHHHHHHhhcCC
Q psy16939 160 QSFLKNAQTMLNDP 173 (174)
Q Consensus 160 ~~l~~al~~ll~~~ 173 (174)
++|+++++++|+++
T Consensus 405 e~l~~av~~vm~~~ 418 (455)
T PLN02152 405 GEIRRCLEAVMEEK 418 (455)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999754
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=212.35 Aligned_cols=150 Identities=28% Similarity=0.366 Sum_probs=130.7
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC---------CCcc-ccccCCCCCE
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT---------NDPV-LNAKTLPDNV 88 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~---------~~~~-~~~~~~~~nv 88 (174)
++++.+|++..+ +++|||||||... ++.+.+.+++.+++..+++|||+++.. .+++ +.+ ..++|.
T Consensus 264 ~~~~~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~-~~~~~g 339 (480)
T PLN02555 264 ADDCIEWLDSKPPSSVVYISFGTVVY---LKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLE-KAGDKG 339 (480)
T ss_pred chhHHHHHhCCCCCceeEEEeccccC---CCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhh-hcCCce
Confidence 356899999987 7899999999875 789999999999999999999998631 1221 222 345788
Q ss_pred EEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc-CceeEec-----CCCCCHHHH
Q psy16939 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR-GYALIEP-----IQTLTKQSF 162 (174)
Q Consensus 89 ~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~-G~g~~l~-----~~~~~~~~l 162 (174)
.+.+|+||.++|.|+++++||||||+||+.||+++|+|||++|+++||+.||+++++. |+|+.+. ...++.+++
T Consensus 340 ~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v 419 (480)
T PLN02555 340 KIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEV 419 (480)
T ss_pred EEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999886 9999993 345789999
Q ss_pred HHHHHHhhcCC
Q psy16939 163 LKNAQTMLNDP 173 (174)
Q Consensus 163 ~~al~~ll~~~ 173 (174)
.++++++|.++
T Consensus 420 ~~~v~~vm~~~ 430 (480)
T PLN02555 420 AECLLEATVGE 430 (480)
T ss_pred HHHHHHHhcCc
Confidence 99999999764
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=211.81 Aligned_cols=150 Identities=25% Similarity=0.395 Sum_probs=128.4
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC----ccccccCCCCCEEEeecCC
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND----PVLNAKTLPDNVFIQKWYP 95 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~----~~~~~~~~~~nv~~~~~~p 95 (174)
+++.+|++..+ +++|||||||... .+.+.+++++.+|+..+.+|||+++.... ..+.++..+++..+.+|+|
T Consensus 257 ~~~~~wld~~~~~svvyvsfGS~~~---~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~P 333 (456)
T PLN02210 257 DCCMEWLDKQARSSVVYISFGSMLE---SLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSP 333 (456)
T ss_pred hHHHHHHhCCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCC
Confidence 34789999887 7999999999876 68999999999999999999999875321 1121111135667889999
Q ss_pred chhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCC----CCCHHHHHHHHHHhh
Q psy16939 96 QTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQ----TLTKQSFLKNAQTML 170 (174)
Q Consensus 96 ~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~----~~~~~~l~~al~~ll 170 (174)
|.++|.|+++++||||||+||++|++++|||+|++|+++||+.||+++++ .|+|+.+... .++.++|+++++++|
T Consensus 334 Q~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m 413 (456)
T PLN02210 334 QEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVT 413 (456)
T ss_pred HHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998 8999998642 479999999999999
Q ss_pred cCC
Q psy16939 171 NDP 173 (174)
Q Consensus 171 ~~~ 173 (174)
.++
T Consensus 414 ~~~ 416 (456)
T PLN02210 414 EGP 416 (456)
T ss_pred cCc
Confidence 765
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=209.71 Aligned_cols=151 Identities=19% Similarity=0.255 Sum_probs=130.1
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC--------CCcc-ccccCCCCCEE
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT--------NDPV-LNAKTLPDNVF 89 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~--------~~~~-~~~~~~~~nv~ 89 (174)
.+++.+|++..+ +++|||||||... ++.+.+.++..+|+..+.+|+|+.+.. .+++ |.++....++.
T Consensus 244 ~~~cl~WLD~q~~~sVvyvsfGS~~~---~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v 320 (453)
T PLN02764 244 EERWVKWLSGYEPDSVVFCALGSQVI---LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVV 320 (453)
T ss_pred hhHHHHHHhCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcE
Confidence 457899999987 9999999999976 789999999999999999999999842 1222 32222345677
Q ss_pred EeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCC---CCCHHHHHHH
Q psy16939 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQ---TLTKQSFLKN 165 (174)
Q Consensus 90 ~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~---~~~~~~l~~a 165 (174)
+.+|+||.++|.|+++++||||||+||++|++++|+|+|++|++.||+.||+++++ .|+|+.+..+ .++.++|+++
T Consensus 321 ~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~a 400 (453)
T PLN02764 321 WGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDA 400 (453)
T ss_pred EeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999964 8999987533 4799999999
Q ss_pred HHHhhcCC
Q psy16939 166 AQTMLNDP 173 (174)
Q Consensus 166 l~~ll~~~ 173 (174)
++++|+++
T Consensus 401 v~~vm~~~ 408 (453)
T PLN02764 401 INSVMKRD 408 (453)
T ss_pred HHHHhcCC
Confidence 99999763
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=212.05 Aligned_cols=149 Identities=19% Similarity=0.392 Sum_probs=126.0
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---------Ccc-ccccCCCCCEE
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---------DPV-LNAKTLPDNVF 89 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---------~~~-~~~~~~~~nv~ 89 (174)
+++.+|++..+ +++|||||||... ++.+.+.+++.+|+..+++|||+++... +++ +.+ ...++.+
T Consensus 268 ~~~~~wld~~~~~svvyvsfGS~~~---~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~e-r~~~rg~ 343 (475)
T PLN02167 268 DRIMRWLDDQPESSVVFLCFGSLGS---LPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMD-RVMGRGL 343 (475)
T ss_pred HHHHHHHhcCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHH-HhccCee
Confidence 57999999987 7999999999865 6889999999999999999999987421 111 111 1122347
Q ss_pred EeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHH-HHHcCceeEecC-------CCCCHHH
Q psy16939 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVL-LRHRGYALIEPI-------QTLTKQS 161 (174)
Q Consensus 90 ~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~-l~~~G~g~~l~~-------~~~~~~~ 161 (174)
+.+|+||.++|.|+++++||||||+||++|++++|||||++|+++||+.||++ ++.+|+|+.+.. ..++.++
T Consensus 344 v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~ 423 (475)
T PLN02167 344 VCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADE 423 (475)
T ss_pred eeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHH
Confidence 88999999999999999999999999999999999999999999999999976 678999998853 2468999
Q ss_pred HHHHHHHhhcCC
Q psy16939 162 FLKNAQTMLNDP 173 (174)
Q Consensus 162 l~~al~~ll~~~ 173 (174)
|.++++++|.++
T Consensus 424 l~~av~~~m~~~ 435 (475)
T PLN02167 424 IAGAVRSLMDGE 435 (475)
T ss_pred HHHHHHHHhcCC
Confidence 999999999754
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=208.83 Aligned_cols=150 Identities=17% Similarity=0.286 Sum_probs=129.1
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC--------CCcc-ccccCCCCCEEE
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT--------NDPV-LNAKTLPDNVFI 90 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~--------~~~~-~~~~~~~~nv~~ 90 (174)
+++.+|++..+ +++|||||||... ++.+.+.++..+|+..+.+|+|++... .+++ |.++....+..+
T Consensus 240 ~~~~~WLD~q~~~sVvyvsfGS~~~---~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv 316 (446)
T PLN00414 240 DRWNHWLNGFEPGSVVFCAFGTQFF---FEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVW 316 (446)
T ss_pred HHHHHHHhcCCCCceEEEeeccccc---CCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEE
Confidence 46889999988 8999999999986 688999999999999999999998752 1222 322223345666
Q ss_pred eecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHH-HcCceeEecCC---CCCHHHHHHHH
Q psy16939 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLR-HRGYALIEPIQ---TLTKQSFLKNA 166 (174)
Q Consensus 91 ~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~-~~G~g~~l~~~---~~~~~~l~~al 166 (174)
.+|+||.++|.|+++++||||||+||++|++++|+|++++|++.||+.||++++ +.|+|+.+..+ .++.+++++++
T Consensus 317 ~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v 396 (446)
T PLN00414 317 EGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTV 396 (446)
T ss_pred eccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999996 68999999643 37999999999
Q ss_pred HHhhcCC
Q psy16939 167 QTMLNDP 173 (174)
Q Consensus 167 ~~ll~~~ 173 (174)
+++|.++
T Consensus 397 ~~~m~~~ 403 (446)
T PLN00414 397 KSVMDKD 403 (446)
T ss_pred HHHhcCC
Confidence 9999763
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=210.57 Aligned_cols=147 Identities=20% Similarity=0.336 Sum_probs=127.9
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC---CCcc-ccccCCCCCEEEeecCCc
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT---NDPV-LNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~---~~~~-~~~~~~~~nv~~~~~~p~ 96 (174)
++.+|++..+ +++|||||||... .++.+.+++++.+|+..+++|||+++.. .+++ +.+ ..++|+.+.+|+||
T Consensus 262 ~c~~wLd~~~~~svvyvsfGS~~~--~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~-~~~~~~~v~~w~PQ 338 (448)
T PLN02562 262 SCLGWLQEQKPNSVIYISFGSWVS--PIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVE-RVSKQGKVVSWAPQ 338 (448)
T ss_pred HHHHHHhcCCCCceEEEEeccccc--CCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHH-HhccCEEEEecCCH
Confidence 4569999987 7899999999753 2689999999999999999999998642 2332 222 35689999999999
Q ss_pred hhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 97 TDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 97 ~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.++|.|+++.+||||||+||++|++++|||+|++|+++||+.||+++++ .|+|+.+. +++.+++.++++++|.++
T Consensus 339 ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~~~l~~~v~~~l~~~ 414 (448)
T PLN02562 339 LEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQKEVEEGLRKVMEDS 414 (448)
T ss_pred HHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCHHHHHHHHHHHhCCH
Confidence 9999999999999999999999999999999999999999999999987 58888873 578999999999999764
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=209.91 Aligned_cols=151 Identities=21% Similarity=0.323 Sum_probs=126.8
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---------------Ccc-cccc
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---------------DPV-LNAK 82 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---------------~~~-~~~~ 82 (174)
++++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||+++... +++ +.++
T Consensus 259 ~~~~~~wLd~~~~~svvyvsfGS~~~---~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 335 (480)
T PLN00164 259 PHECVRWLDAQPPASVVFLCFGSMGF---FDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLER 335 (480)
T ss_pred hHHHHHHHHhCCCCceEEEEeccccc---CCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHH
Confidence 357999999987 7999999999865 6888999999999999999999987421 110 1111
Q ss_pred CCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHH-HcCceeEecCC-----C
Q psy16939 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLR-HRGYALIEPIQ-----T 156 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~-~~G~g~~l~~~-----~ 156 (174)
....++.+.+|+||.++|.|+++.+||||||+||++|++++|||||++|+++||+.||+++. .+|+|+.+..+ .
T Consensus 336 ~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~ 415 (480)
T PLN00164 336 TKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNF 415 (480)
T ss_pred hcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCc
Confidence 12234777799999999999999999999999999999999999999999999999999885 58999998532 3
Q ss_pred CCHHHHHHHHHHhhcCC
Q psy16939 157 LTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 157 ~~~~~l~~al~~ll~~~ 173 (174)
.+.++|.++++++|.++
T Consensus 416 ~~~e~l~~av~~vm~~~ 432 (480)
T PLN00164 416 VEAAELERAVRSLMGGG 432 (480)
T ss_pred CcHHHHHHHHHHHhcCC
Confidence 68999999999999764
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=207.55 Aligned_cols=147 Identities=23% Similarity=0.391 Sum_probs=126.3
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC---CCcc-ccccCCCCCEEEeecCCc
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT---NDPV-LNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~---~~~~-~~~~~~~~nv~~~~~~p~ 96 (174)
.+.+|++..+ +++|||||||... ++.+.+.+++.+| .+.+|+|+++.. .+++ +.++..++|+.+.+|+||
T Consensus 253 ~c~~WLd~~~~~svvyvsfGS~~~---~~~~~~~ela~gL--s~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ 327 (449)
T PLN02173 253 LCTDWLDKRPQGSVVYIAFGSMAK---LSSEQMEEIASAI--SNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQ 327 (449)
T ss_pred HHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHh--cCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCH
Confidence 4889999988 7899999999875 7899999999999 566899999742 2332 323223688999999999
Q ss_pred hhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc-CceeEecCC----CCCHHHHHHHHHHhhc
Q psy16939 97 TDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR-GYALIEPIQ----TLTKQSFLKNAQTMLN 171 (174)
Q Consensus 97 ~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~-G~g~~l~~~----~~~~~~l~~al~~ll~ 171 (174)
.++|.|+++.+||||||+||++|++++|||+|++|+++||+.||+++++. |+|+.+..+ ..+.+++.++++++|.
T Consensus 328 ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~ 407 (449)
T PLN02173 328 LQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVME 407 (449)
T ss_pred HHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999975 999887533 2589999999999997
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
++
T Consensus 408 ~~ 409 (449)
T PLN02173 408 GE 409 (449)
T ss_pred CC
Confidence 65
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=210.95 Aligned_cols=151 Identities=23% Similarity=0.373 Sum_probs=127.1
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC--------CCcc-ccccCCCCCEE
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT--------NDPV-LNAKTLPDNVF 89 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~--------~~~~-~~~~~~~~nv~ 89 (174)
++++.+|++..+ +++|||||||... ++.+.+.+++.+|+..+++|||+++.. .+++ +.++..+.|+.
T Consensus 272 ~~~~~~wLd~~~~~svvyvsfGS~~~---~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~ 348 (482)
T PLN03007 272 EQECLKWLDSKKPDSVIYLSFGSVAS---FKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLI 348 (482)
T ss_pred hhHHHHHHhcCCCCceEEEeecCCcC---CCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEE
Confidence 356899999987 8999999999965 678899999999999999999998852 1231 22222467899
Q ss_pred EeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH---cCceeEe------cCCCCCHH
Q psy16939 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH---RGYALIE------PIQTLTKQ 160 (174)
Q Consensus 90 ~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~---~G~g~~l------~~~~~~~~ 160 (174)
+.+|+||.++|.|+++.+||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.. +...++.+
T Consensus 349 v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 428 (482)
T PLN03007 349 IRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISRE 428 (482)
T ss_pred EecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHH
Confidence 99999999999999999999999999999999999999999999999999998874 4555432 33457999
Q ss_pred HHHHHHHHhhcCC
Q psy16939 161 SFLKNAQTMLNDP 173 (174)
Q Consensus 161 ~l~~al~~ll~~~ 173 (174)
+|.++++++|.++
T Consensus 429 ~l~~av~~~m~~~ 441 (482)
T PLN03007 429 KVEKAVREVIVGE 441 (482)
T ss_pred HHHHHHHHHhcCc
Confidence 9999999999875
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=208.11 Aligned_cols=147 Identities=22% Similarity=0.309 Sum_probs=127.1
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhh
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDIL 100 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l 100 (174)
++.+|++..+ +++|||||||... ++.+.+++++++|+..+++|||+.+... ..+.+ ..++|..+.+|+||.++|
T Consensus 263 ~~~~wl~~~~~~~vvyvsfGs~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~-~~~~~-~~~~~~~v~~w~pQ~~iL 337 (459)
T PLN02448 263 DYFQWLDSQPEGSVLYVSLGSFLS---VSSAQMDEIAAGLRDSGVRFLWVARGEA-SRLKE-ICGDMGLVVPWCDQLKVL 337 (459)
T ss_pred HHHHHHcCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCCEEEEEcCch-hhHhH-hccCCEEEeccCCHHHHh
Confidence 7889999987 8999999999875 6788999999999999999999876431 11111 234688999999999999
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecC-----CCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPI-----QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~-----~~~~~~~l~~al~~ll~~~ 173 (174)
.|+++.+||||||+||++|++++|+|+|++|+++||+.||+++++ +|+|+.+.. ...+.++|+++++++|.++
T Consensus 338 ~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 338 CHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLE 416 (459)
T ss_pred ccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999998 588888742 2468999999999999763
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=206.44 Aligned_cols=148 Identities=24% Similarity=0.374 Sum_probs=126.3
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC--------Ccc-ccccCCCCCEEE
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN--------DPV-LNAKTLPDNVFI 90 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~--------~~~-~~~~~~~~nv~~ 90 (174)
+++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||+++... ++. +.++....++++
T Consensus 271 ~~~~~WLd~~~~~svVyvsfGS~~~---~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v 347 (477)
T PLN02863 271 DDVMTWLDTCEDHKVVYVCFGSQVV---LTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVI 347 (477)
T ss_pred HHHHHHHhcCCCCceEEEEeeceec---CCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEe
Confidence 47999999987 8999999999976 6889999999999999999999997421 121 211122457888
Q ss_pred eecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHH-HcCceeEecC---CCCCHHHHHHHH
Q psy16939 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLR-HRGYALIEPI---QTLTKQSFLKNA 166 (174)
Q Consensus 91 ~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~-~~G~g~~l~~---~~~~~~~l~~al 166 (174)
.+|+||.++|.|+++++||||||+||++||+++|||+|++|+++||+.||++++ ++|+|+.+.. ...+.+++.+++
T Consensus 348 ~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v 427 (477)
T PLN02863 348 RGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVF 427 (477)
T ss_pred cCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999976 4799999843 235789999999
Q ss_pred HHhhc
Q psy16939 167 QTMLN 171 (174)
Q Consensus 167 ~~ll~ 171 (174)
++++.
T Consensus 428 ~~~m~ 432 (477)
T PLN02863 428 MESVS 432 (477)
T ss_pred HHHhh
Confidence 99883
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=203.16 Aligned_cols=159 Identities=21% Similarity=0.385 Sum_probs=132.2
Q ss_pred cccCCcccc-----CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC------
Q psy16939 9 VKLCSMCFI-----DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND------ 76 (174)
Q Consensus 9 ~~~~g~~~~-----~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~------ 76 (174)
+-.+||... ..++++.+|++..+ +++|||||||... ++.+.+++++.+|+..+++|||+++....
T Consensus 238 v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~---~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~ 314 (470)
T PLN03015 238 VYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGT---LTFEQTVELAWGLELSGQRFVWVLRRPASYLGASS 314 (470)
T ss_pred eEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCc---CCHHHHHHHHHHHHhCCCcEEEEEecCcccccccc
Confidence 445666642 12347999999987 8999999999976 89999999999999999999999963210
Q ss_pred ---ccccccCCCCC---------EEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHH-
Q psy16939 77 ---PVLNAKTLPDN---------VFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL- 143 (174)
Q Consensus 77 ---~~~~~~~~~~n---------v~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l- 143 (174)
....+ .+|+| +.+.+|+||.++|.|+++.+||||||+||+.|++++||||+++|+++||+.||+++
T Consensus 315 ~~~~~~~~-~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~ 393 (470)
T PLN03015 315 SDDDQVSA-SLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT 393 (470)
T ss_pred ccccchhh-cCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHH
Confidence 00000 23444 67889999999999999999999999999999999999999999999999999999
Q ss_pred HHcCceeEec----CCCCCHHHHHHHHHHhhc
Q psy16939 144 RHRGYALIEP----IQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 144 ~~~G~g~~l~----~~~~~~~~l~~al~~ll~ 171 (174)
+..|+|+.+. ....+.+++.++++++|.
T Consensus 394 ~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 394 EEIGVAVRTSELPSEKVIGREEVASLVRKIVA 425 (470)
T ss_pred HHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence 5689999985 235789999999999995
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=197.56 Aligned_cols=155 Identities=25% Similarity=0.347 Sum_probs=132.3
Q ss_pred cccCCccccCChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCE
Q psy16939 9 VKLCSMCFIDGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV 88 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv 88 (174)
..+.||.......++..|... ++++||+++||... . .++++.+++++..++.+||+..++.... ....+.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~-d~~~vyvslGt~~~---~-~~l~~~~~~a~~~l~~~vi~~~~~~~~~---~~~~p~n~ 286 (406)
T COG1819 215 GPYIGPLLGEAANELPYWIPA-DRPIVYVSLGTVGN---A-VELLAIVLEALADLDVRVIVSLGGARDT---LVNVPDNV 286 (406)
T ss_pred cCccccccccccccCcchhcC-CCCeEEEEcCCccc---H-HHHHHHHHHHHhcCCcEEEEeccccccc---cccCCCce
Confidence 334444444444555566333 36999999999976 2 7899999999999999999988762221 11789999
Q ss_pred EEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHH
Q psy16939 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQT 168 (174)
Q Consensus 89 ~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ 168 (174)
.+.+|+||..++ ++||+||||||+||++|||++|||+|++|...||+.||.++++.|+|+.+..+.++.+.++++|++
T Consensus 287 ~v~~~~p~~~~l--~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~ 364 (406)
T COG1819 287 IVADYVPQLELL--PRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNE 364 (406)
T ss_pred EEecCCCHHHHh--hhcCEEEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHH
Confidence 999999999999 889999999999999999999999999999999999999999999999999889999999999999
Q ss_pred hhcCC
Q psy16939 169 MLNDP 173 (174)
Q Consensus 169 ll~~~ 173 (174)
+|+|+
T Consensus 365 vL~~~ 369 (406)
T COG1819 365 VLADD 369 (406)
T ss_pred HhcCH
Confidence 99875
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=193.39 Aligned_cols=163 Identities=26% Similarity=0.389 Sum_probs=136.5
Q ss_pred cccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcccccc
Q psy16939 4 VLNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAK 82 (174)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~ 82 (174)
.++.+++++||++...+ +...|....+ +++|||++||... .....++++++++.+.+.+++|..+.....+.. .
T Consensus 197 ~~~~~~~~~Gp~~~~~~-~~~~~~~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~-~ 271 (392)
T TIGR01426 197 TFDDSFTFVGPCIGDRK-EDGSWERPGDGRPVVLISLGTVFN---NQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADL-G 271 (392)
T ss_pred ccCCCeEEECCCCCCcc-ccCCCCCCCCCCCEEEEecCccCC---CCHHHHHHHHHHHhcCCCeEEEEECCCCChhHh-c
Confidence 56788999999886533 2334666544 8999999999754 245689999999999999999888754221100 1
Q ss_pred CCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy16939 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l 162 (174)
..++|+.+.+|+|+.+++ +.+|++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.+...+++.++|
T Consensus 272 ~~~~~v~~~~~~p~~~ll--~~~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l 349 (392)
T TIGR01426 272 ELPPNVEVRQWVPQLEIL--KKADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKL 349 (392)
T ss_pred cCCCCeEEeCCCCHHHHH--hhCCEEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHH
Confidence 467899999999999999 679999999999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHhhcCC
Q psy16939 163 LKNAQTMLNDP 173 (174)
Q Consensus 163 ~~al~~ll~~~ 173 (174)
.++++++++|+
T Consensus 350 ~~ai~~~l~~~ 360 (392)
T TIGR01426 350 REAVLAVLSDP 360 (392)
T ss_pred HHHHHHHhcCH
Confidence 99999999875
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=195.53 Aligned_cols=148 Identities=24% Similarity=0.411 Sum_probs=127.0
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---------Ccc-ccccCCCCCEE
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---------DPV-LNAKTLPDNVF 89 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---------~~~-~~~~~~~~nv~ 89 (174)
+++.+|++..+ +++|||+|||... +..+.+.+++.+|+..+++|||+++... +++ |.++..+.+++
T Consensus 271 ~~cl~wLd~~~~~sVvyvsfGS~~~---~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~ 347 (491)
T PLN02534 271 TQCLEWLDSMKPRSVIYACLGSLCR---LVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLL 347 (491)
T ss_pred HHHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCee
Confidence 35889999998 8999999999975 7899999999999999999999998421 222 32222467888
Q ss_pred EeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecC---------C----
Q psy16939 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPI---------Q---- 155 (174)
Q Consensus 90 ~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~---------~---- 155 (174)
+.+|+||.++|.|+++.+||||||+||++||+++|+|+|++|.+.||+.||+++++ +|+|+.+.. +
T Consensus 348 v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~ 427 (491)
T PLN02534 348 IKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGV 427 (491)
T ss_pred ccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccC
Confidence 89999999999999999999999999999999999999999999999999999974 799887631 1
Q ss_pred CCCHHHHHHHHHHhhc
Q psy16939 156 TLTKQSFLKNAQTMLN 171 (174)
Q Consensus 156 ~~~~~~l~~al~~ll~ 171 (174)
..+.+++.++++++|.
T Consensus 428 ~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 428 LVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccCHHHHHHHHHHHhc
Confidence 2689999999999996
|
|
| >KOG1192|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=195.33 Aligned_cols=153 Identities=31% Similarity=0.532 Sum_probs=124.9
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCcccccc--C-CCCCEEEeecCCc
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAK--T-LPDNVFIQKWYPQ 96 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~--~-~~~nv~~~~~~p~ 96 (174)
.++.+.++....++||||+||...+..++.+...+++.++++. +++|+|.+.......+.+. . .+.|+...+|+||
T Consensus 266 ~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ 345 (496)
T KOG1192|consen 266 LEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQ 345 (496)
T ss_pred HHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCc
Confidence 3444444442238999999999865568999999999999999 6789999987432110000 1 2568999999999
Q ss_pred hhh-hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 97 TDI-LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 97 ~~~-l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.++ |.|++.++||||||+||++|++++|||++++|+++||+.||+++++.|.+.++...+.+.+.+.+++.+++.++
T Consensus 346 ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~ 423 (496)
T KOG1192|consen 346 NDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENE 423 (496)
T ss_pred HHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcCh
Confidence 998 48899999999999999999999999999999999999999999999999998877776666888888887665
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=190.07 Aligned_cols=146 Identities=26% Similarity=0.295 Sum_probs=127.2
Q ss_pred ChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 19 GLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 19 ~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
.+.++..|++.. +++|||++||... .........++++++..+.+++|..+...... ...++|+++.+|+|+.+
T Consensus 227 ~~~~~~~~~~~~-~~~v~v~~Gs~~~--~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~---~~~~~~v~~~~~~p~~~ 300 (401)
T cd03784 227 PPPELWLFLAAG-RPPVYVGFGSMVV--RDPEALARLDVEAVATLGQRAILSLGWGGLGA---EDLPDNVRVVDFVPHDW 300 (401)
T ss_pred CCHHHHHHHhCC-CCcEEEeCCCCcc--cCHHHHHHHHHHHHHHcCCeEEEEccCccccc---cCCCCceEEeCCCCHHH
Confidence 356777887654 5999999999865 23567889999999998999999988654321 15678999999999999
Q ss_pred hhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 99 ILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
+| +.||++|||||+||++|++++|+|+|++|...||+.||+++++.|+|+.+...+++.++|.+++++++++
T Consensus 301 ll--~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 301 LL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred Hh--hhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 99 6799999999999999999999999999999999999999999999999988778999999999999875
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.7e-19 Score=137.68 Aligned_cols=121 Identities=20% Similarity=0.309 Sum_probs=102.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCccccccCCCCCEEEeecC--CchhhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVLNAKTLPDNVFIQKWY--PQTDILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~--p~~~~l~~~~~~~~ 108 (174)
++.|+|++|+... . .+.++++..+ +++++. +..... ...+|+.+.+|. +..++| +.||++
T Consensus 192 ~~~iLv~~gg~~~-----~----~~~~~l~~~~~~~~~v~-g~~~~~-----~~~~ni~~~~~~~~~~~~~m--~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGP-----G----DLIEALKALPDYQFIVF-GPNAAD-----PRPGNIHVRPFSTPDFAELM--AAADLV 254 (318)
T ss_pred CCEEEEEeCCCcH-----H----HHHHHHHhCCCCeEEEE-cCCccc-----ccCCCEEEeecChHHHHHHH--HhCCEE
Confidence 5889999999964 2 6677777777 577776 544322 447899999986 455677 789999
Q ss_pred EecCChhhHHHHHHcCCCeEeccc--cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHh
Q psy16939 109 ITHGGISSLMEASSLGVPVLGVPF--FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 109 I~hgG~~t~~eal~~g~P~i~vP~--~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~l 169 (174)
|+|||++|++|++++|+|++++|. +.||..||+++++.|+|+.++.++++++.|.++|+++
T Consensus 255 Is~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 999999999999999999999998 7899999999999999999998899999999999875
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-19 Score=140.84 Aligned_cols=135 Identities=21% Similarity=0.198 Sum_probs=103.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecC-Cch-hhhcCCCccEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWY-PQT-DILAHPNLRLFI 109 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~-p~~-~~l~~~~~~~~I 109 (174)
+++|+|..||.+.. .-++.+.+++..+.. +.+++|++|.....+... . ..++.+.+|+ +.+ +++ ..||++|
T Consensus 185 ~~~iLv~GGS~Ga~--~in~~~~~~l~~l~~-~~~vv~~~G~~~~~~~~~-~-~~~~~~~~f~~~~m~~~~--~~adlvI 257 (352)
T PRK12446 185 KPVITIMGGSLGAK--KINETVREALPELLL-KYQIVHLCGKGNLDDSLQ-N-KEGYRQFEYVHGELPDIL--AITDFVI 257 (352)
T ss_pred CcEEEEECCccchH--HHHHHHHHHHHhhcc-CcEEEEEeCCchHHHHHh-h-cCCcEEecchhhhHHHHH--HhCCEEE
Confidence 78999999999751 112333344443322 478999999765443111 1 1355667887 544 456 7899999
Q ss_pred ecCChhhHHHHHHcCCCeEecccc-----chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 110 THGGISSLMEASSLGVPVLGVPFF-----GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 110 ~hgG~~t~~eal~~g~P~i~vP~~-----~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||||++|+.|++++|+|+|++|+. +||..||+++++.|++..+..++++.+.|.+++.++++|+
T Consensus 258 sr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 258 SRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred ECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCH
Confidence 999999999999999999999984 5899999999999999999888899999999999998764
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.7e-21 Score=137.09 Aligned_cols=136 Identities=22% Similarity=0.340 Sum_probs=97.1
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCcccccc--CCCCCEEEeecCCch-hhhcCCCccEE
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVLNAK--TLPDNVFIQKWYPQT-DILAHPNLRLF 108 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~-~~l~~~~~~~~ 108 (174)
.|+|+.||.+... -.+.+.++...+... ..++++++|.....+.... ....++.+.+|.+++ +++ ..||++
T Consensus 1 tilv~gGs~g~~~--l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m--~~aDlv 76 (167)
T PF04101_consen 1 TILVTGGSQGARD--LNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELM--AAADLV 76 (167)
T ss_dssp -EEEEETTTSHHH--HHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHH--HHHSEE
T ss_pred CEEEEECCCCHHH--HHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHH--HHcCEE
Confidence 4899999886410 011222333333332 3689999987644321110 223789999999944 566 789999
Q ss_pred EecCChhhHHHHHHcCCCeEeccccc----hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 109 ITHGGISSLMEASSLGVPVLGVPFFG----DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 109 I~hgG~~t~~eal~~g~P~i~vP~~~----dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|||||.+|++|+++.|+|+|++|... ||..||..+++.|+|+.+.....+.++|.++|.++++++
T Consensus 77 Is~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 77 ISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp EECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred EeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCc
Confidence 99999999999999999999999988 999999999999999999888878899999999988763
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.4e-19 Score=139.23 Aligned_cols=137 Identities=20% Similarity=0.247 Sum_probs=107.7
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccccccCCCCC-EEEeecCCchhhhcCCCccE
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVLNAKTLPDN-VFIQKWYPQTDILAHPNLRL 107 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~n-v~~~~~~p~~~~l~~~~~~~ 107 (174)
++++|+|..||.+. ..+-+.+.+++... +..+++.+|...+.+........+ +.+.+|++++..+. ..+|+
T Consensus 182 ~~~~ilV~GGS~Ga-----~~ln~~v~~~~~~l~~~~~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~-~~ADL 255 (357)
T COG0707 182 DKKTILVTGGSQGA-----KALNDLVPEALAKLANRIQVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALL-AAADL 255 (357)
T ss_pred CCcEEEEECCcchh-----HHHHHHHHHHHHHhhhCeEEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHH-HhccE
Confidence 37999999999975 33333344444333 468888888865433211111222 89999998877553 79999
Q ss_pred EEecCChhhHHHHHHcCCCeEecccc----chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 108 FITHGGISSLMEASSLGVPVLGVPFF----GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 108 ~I~hgG~~t~~eal~~g~P~i~vP~~----~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+||++|++|+.|+++.|+|+|++|+. +||..||+.++++|+|++++..+++.+++.+.|.++++++
T Consensus 256 vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 256 VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNP 325 (357)
T ss_pred EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCH
Confidence 99999999999999999999999873 4999999999999999999999999999999999999864
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-17 Score=128.26 Aligned_cols=123 Identities=24% Similarity=0.350 Sum_probs=92.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEecCCCCccccccCCCCCEEEeecCC--chhhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKIDITNDPVLNAKTLPDNVFIQKWYP--QTDILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p--~~~~l~~~~~~~~ 108 (174)
++.|+|.+|+.. .+.+++++.+.+. .+++. +.+.... ..++|+.+.+|.+ ..+.| +.||++
T Consensus 188 ~~~iLv~~g~~~---------~~~l~~~l~~~~~~~~i~~-~~~~~~~----~~~~~v~~~~~~~~~~~~~l--~~ad~v 251 (321)
T TIGR00661 188 EDYILVYIGFEY---------RYKILELLGKIANVKFVCY-SYEVAKN----SYNENVEIRRITTDNFKELI--KNAELV 251 (321)
T ss_pred CCcEEEECCcCC---------HHHHHHHHHhCCCeEEEEe-CCCCCcc----ccCCCEEEEECChHHHHHHH--HhCCEE
Confidence 477888887763 3455677777664 44432 2222111 4568999999987 33455 889999
Q ss_pred EecCChhhHHHHHHcCCCeEeccccc--hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 109 ITHGGISSLMEASSLGVPVLGVPFFG--DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 109 I~hgG~~t~~eal~~g~P~i~vP~~~--dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|||||++|++|++++|+|++++|..+ ||..||+.+++.|+|+.++..++ ++.+++.+++.++
T Consensus 252 I~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 252 ITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred EECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH---HHHHHHHhccccc
Confidence 99999999999999999999999854 89999999999999999976654 5666666666664
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.6e-14 Score=107.97 Aligned_cols=137 Identities=23% Similarity=0.220 Sum_probs=109.0
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-Cc--EEEEecCCCCcc-----ccc-cCCCCCEEEeecCCchhhhc
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LP--IFWKIDITNDPV-----LNA-KTLPDNVFIQKWYPQTDILA 101 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~--~i~~~~~~~~~~-----~~~-~~~~~nv~~~~~~p~~~~l~ 101 (174)
++..|+||.|+..- ..+++...+++....+ .+ .++.+|+. +|+ +.. ...-+++.+..|-.+..-|.
T Consensus 218 E~~~Ilvs~GGG~d----G~eLi~~~l~A~~~l~~l~~~~~ivtGP~-MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll 292 (400)
T COG4671 218 EGFDILVSVGGGAD----GAELIETALAAAQLLAGLNHKWLIVTGPF-MPEAQRQKLLASAPKRPHISIFEFRNDFESLL 292 (400)
T ss_pred ccceEEEecCCChh----hHHHHHHHHHHhhhCCCCCcceEEEeCCC-CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHH
Confidence 35789999998864 7888888888876643 33 55556653 221 111 12347999999976555333
Q ss_pred CCCccEEEecCChhhHHHHHHcCCCeEecccc---chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 102 HPNLRLFITHGGISSLMEASSLGVPVLGVPFF---GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~---~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..|+.+|+-||+||+||.+++|+|.++||+. .||...|.+++++|+.-++.+++++++.+.+++...++-|
T Consensus 293 -~gA~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 293 -AGARLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred -HhhheeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 7899999999999999999999999999984 4999999999999999999999999999999999888743
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-13 Score=108.19 Aligned_cols=135 Identities=20% Similarity=0.206 Sum_probs=97.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC--cEEEEecCCCCcccccc-CCCCCEEEeecCC-chhhhcCCCccE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL--PIFWKIDITNDPVLNAK-TLPDNVFIQKWYP-QTDILAHPNLRL 107 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~--~~i~~~~~~~~~~~~~~-~~~~nv~~~~~~p-~~~~l~~~~~~~ 107 (174)
.++|++..|+.. .......+.+++++... .+++.+|....+++.+. ...-++.+.+|++ ..+++ +.+|+
T Consensus 183 ~~~i~~~gg~~~-----~~~~~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d~ 255 (357)
T PRK00726 183 KPTLLVVGGSQG-----ARVLNEAVPEALALLPEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAY--AAADL 255 (357)
T ss_pred CeEEEEECCcHh-----HHHHHHHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHH--HhCCE
Confidence 455666555542 12222333355554433 45566665443322110 1222488899984 45677 78999
Q ss_pred EEecCChhhHHHHHHcCCCeEeccc----cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 108 FITHGGISSLMEASSLGVPVLGVPF----FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 108 ~I~hgG~~t~~eal~~g~P~i~vP~----~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|+|+|.++++||+++|+|+|++|. .++|..|+..+.+.|.|+.+..++++.+.+.++++++++|+
T Consensus 256 ~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 256 VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCH
Confidence 9999999999999999999999986 47899999999999999999888888999999999999875
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.3e-13 Score=103.85 Aligned_cols=129 Identities=21% Similarity=0.188 Sum_probs=93.0
Q ss_pred CccccCCccccCChHHHHHHHhcCC----CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC--CcEEEEecCCCCc--c
Q psy16939 7 RAVKLCSMCFIDGLSDLQQRADAAK----GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK--LPIFWKIDITNDP--V 78 (174)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~----~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~--~~~i~~~~~~~~~--~ 78 (174)
+...+.|+-+.++.+++.+.-.... .+.|+|++|+... .....++++++.+.. .++.+.+|+.... +
T Consensus 141 ~~~~l~G~~Y~~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~-----~~~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~ 215 (279)
T TIGR03590 141 NCRLLLGPSYALLREEFYQLATANKRRKPLRRVLVSFGGADP-----DNLTLKLLSALAESQINISITLVTGSSNPNLDE 215 (279)
T ss_pred CCeEEecchHHhhhHHHHHhhHhhhcccccCeEEEEeCCcCC-----cCHHHHHHHHHhccccCceEEEEECCCCcCHHH
Confidence 4455778877778777765443222 2679999998754 335666777776653 4677777764311 1
Q ss_pred cccc-CCCCCEEEeecCCch-hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHH
Q psy16939 79 LNAK-TLPDNVFIQKWYPQT-DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143 (174)
Q Consensus 79 ~~~~-~~~~nv~~~~~~p~~-~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l 143 (174)
+.+. ....|+.+..|.+++ .+| ..||++|++|| +|++|+++.|+|+|++|...+|..||+.+
T Consensus 216 l~~~~~~~~~i~~~~~~~~m~~lm--~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~~ 279 (279)
T TIGR03590 216 LKKFAKEYPNIILFIDVENMAELM--NEADLAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQL 279 (279)
T ss_pred HHHHHHhCCCEEEEeCHHHHHHHH--HHCCEEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhhC
Confidence 1110 224589999999887 456 78999999999 89999999999999999999999999763
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >KOG3349|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=7e-13 Score=91.22 Aligned_cols=122 Identities=20% Similarity=0.188 Sum_probs=89.4
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEecCCCC--cc-ccc--cCCCCCEEEeecCCc-hhhhcCCCc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKIDITND--PV-LNA--KTLPDNVFIQKWYPQ-TDILAHPNL 105 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~~~~~~--~~-~~~--~~~~~nv~~~~~~p~-~~~l~~~~~ 105 (174)
..+||+.||..+..-.+.-..++..+.|.+.|+ +.++++|.... ++ ... +...-.+..++|-|. .+.. .+|
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I--~~A 81 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI--RSA 81 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHH--hhc
Confidence 689999999975221223345677788888897 78999887531 11 110 011223555666776 4444 679
Q ss_pred cEEEecCChhhHHHHHHcCCCeEeccc----cchHHHHHHHHHHcCceeEecCCC
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGVPF----FGDQYRNMVLLRHRGYALIEPIQT 156 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~vP~----~~dQ~~na~~l~~~G~g~~l~~~~ 156 (174)
|++|+|+|+||+.|.+..|+|.|+++. ..+|.+-|..+++.|.=......+
T Consensus 82 dlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~ 136 (170)
T KOG3349|consen 82 DLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPST 136 (170)
T ss_pred cEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccc
Confidence 999999999999999999999999985 679999999999999988875543
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-12 Score=102.82 Aligned_cols=138 Identities=20% Similarity=0.218 Sum_probs=96.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccc--cCCCCCEEEeecC-CchhhhcCCCccEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA--KTLPDNVFIQKWY-PQTDILAHPNLRLF 108 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~-p~~~~l~~~~~~~~ 108 (174)
+++|++..|+.... ...+.+.+.+..+.+.+..+++.+|.....++.+ ....+|+.+.+|. +..++| ..||++
T Consensus 181 ~~~i~~~~g~~~~~--~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l--~~ad~~ 256 (350)
T cd03785 181 KPTLLVFGGSQGAR--AINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAY--AAADLV 256 (350)
T ss_pred CeEEEEECCcHhHH--HHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHH--HhcCEE
Confidence 45566656655320 0112222333444322345566666543222111 0224689999998 445566 789999
Q ss_pred EecCChhhHHHHHHcCCCeEeccc----cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 109 ITHGGISSLMEASSLGVPVLGVPF----FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 109 I~hgG~~t~~eal~~g~P~i~vP~----~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|+++|.+|+.||+++|+|++++|. ..+|..|+..+.+.|.|+.+...+.+.+++.++++++++++
T Consensus 257 v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 257 ISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred EECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 999999999999999999999985 46899999999999999999766668999999999998764
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.6e-11 Score=98.08 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=96.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh-hC-CCcEEEEecCCC-C-cccccc-CCCCCEEEeecCCchh-hhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK-QL-KLPIFWKIDITN-D-PVLNAK-TLPDNVFIQKWYPQTD-ILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-~~-~~~~i~~~~~~~-~-~~~~~~-~~~~nv~~~~~~p~~~-~l~~~~~ 105 (174)
+++++++.|+.+. ...+..+++++. .. +.++++.+|... + +++.+. ...+++.+.+|.++.. ++ ..|
T Consensus 202 ~~~ilv~~G~lg~-----~k~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~--~~a 274 (391)
T PRK13608 202 KQTILMSAGAFGV-----SKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWM--ASS 274 (391)
T ss_pred CCEEEEECCCccc-----chhHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHH--Hhh
Confidence 5788888888753 123455555533 22 346777666542 1 112110 2345899999987654 55 789
Q ss_pred cEEEecCChhhHHHHHHcCCCeEec-cccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGV-PFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~v-P~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++|+.+|..|+.||++.|+|+|+. |..++|..|+..+.+.|+|+... +.+++.+++.++++|+
T Consensus 275 Dl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~ 339 (391)
T PRK13608 275 QLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGN 339 (391)
T ss_pred hEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCH
Confidence 9999999989999999999999999 77788889999999999998864 6788999999998764
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=94.12 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=92.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh-----hCCCcEEEEecCCC-C-ccccccCCCCCEEEeecCCchhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK-----QLKLPIFWKIDITN-D-PVLNAKTLPDNVFIQKWYPQTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-----~~~~~~i~~~~~~~-~-~~~~~~~~~~nv~~~~~~p~~~~l~~~~ 104 (174)
+++|++..|+.... .....++.+.+.+. ..+.++++.+|... . .++.+.....++.+.+|+++...+. ..
T Consensus 206 ~~~il~~Gg~~g~~--~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~-~a 282 (382)
T PLN02605 206 LPAVLLMGGGEGMG--PLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWM-GA 282 (382)
T ss_pred CcEEEEECCCcccc--cHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHH-Hh
Confidence 56777777766431 12233333333221 12345666676542 1 1121112245789999998666443 78
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEeccc-cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGVPF-FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~vP~-~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
+|++|+.+|.+|+.||++.|+|+|+.+. .+.+..|+..+.+.|.|+.+. +.+++.+++.+++++
T Consensus 283 aDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~----~~~~la~~i~~ll~~ 347 (382)
T PLN02605 283 CDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFSE----SPKEIARIVAEWFGD 347 (382)
T ss_pred CCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeecC----CHHHHHHHHHHHHcC
Confidence 9999999999999999999999999964 455567999999999998762 789999999999876
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.1e-11 Score=94.27 Aligned_cols=131 Identities=18% Similarity=0.260 Sum_probs=96.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC-C-ccccc--cCCCCCEEEeecCCch-hhhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN-D-PVLNA--KTLPDNVFIQKWYPQT-DILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~-~-~~~~~--~~~~~nv~~~~~~p~~-~~l~~~~~ 105 (174)
++++++..|+... ...+..+++++.+. +.++++..+... . .++.+ +..++|+.+.+|+++. +++ ..|
T Consensus 202 ~~~il~~~G~~~~-----~k~~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~--~~a 274 (380)
T PRK13609 202 KKILLIMAGAHGV-----LGNVKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELF--RVT 274 (380)
T ss_pred CcEEEEEcCCCCC-----CcCHHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHH--Hhc
Confidence 5677887787753 12245667776654 357777666431 1 11110 1334689999999865 566 679
Q ss_pred cEEEecCChhhHHHHHHcCCCeEec-cccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGV-PFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~v-P~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++|+.+|..|+.||+++|+|+|+. |..++|..|+..+.+.|+++... +.+++.+++.++++|+
T Consensus 275 D~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 275 SCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDD 339 (380)
T ss_pred cEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCH
Confidence 9999999988999999999999985 67778889999999999998763 6789999999998774
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-10 Score=87.23 Aligned_cols=156 Identities=15% Similarity=0.087 Sum_probs=118.3
Q ss_pred cccCCccccCChHHHHHHHhc---CCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC--Ccccc-cc
Q psy16939 9 VKLCSMCFIDGLSDLQQRADA---AKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN--DPVLN-AK 82 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~---~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~--~~~~~-~~ 82 (174)
--++||.+.++.+++.+--+. +++.-|+|++|+. .+..+..+++..|.+.++.+-+++++.. +.... ..
T Consensus 132 ~~~lGp~y~~lr~eF~~~r~~~~~r~~r~ilI~lGGs-----Dpk~lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~ 206 (318)
T COG3980 132 RYYLGPGYAPLRPEFYALREENTERPKRDILITLGGS-----DPKNLTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRA 206 (318)
T ss_pred EEEecCCceeccHHHHHhHHHHhhcchheEEEEccCC-----ChhhhHHHHHHHhhccCeeEEEEecCCCcchhHHHHHH
Confidence 356899998888776654332 2346699999998 4677899999999998876666666422 22110 01
Q ss_pred CCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy16939 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l 162 (174)
...+|+.+......+.-|+ .+||+.|+.||. |++|+++.|+|.+++|+...|...|+.++..|+-..+... ++.+..
T Consensus 207 ~~~~~i~~~~~~~dma~LM-ke~d~aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~~~~~ 283 (318)
T COG3980 207 EKYPNINLYIDTNDMAELM-KEADLAISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-LKDLAK 283 (318)
T ss_pred hhCCCeeeEecchhHHHHH-Hhcchheeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-CchHHH
Confidence 3457888888877666454 789999999996 8999999999999999999999999999999999887654 566666
Q ss_pred HHHHHHhhcC
Q psy16939 163 LKNAQTMLND 172 (174)
Q Consensus 163 ~~al~~ll~~ 172 (174)
...+.++.+|
T Consensus 284 ~~~~~~i~~d 293 (318)
T COG3980 284 DYEILQIQKD 293 (318)
T ss_pred HHHHHHhhhC
Confidence 6667776665
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.24 E-value=5e-11 Score=94.29 Aligned_cols=77 Identities=27% Similarity=0.436 Sum_probs=67.8
Q ss_pred CchhhhcCCCccEEEecCChhhHHHHHHcCCCeEecccc---chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 95 PQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFF---GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 95 p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~---~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+...++ +.||++|+++|.+++.||+++|+|+|..|.. .+|..|+..+.+.+.|..+..++.+.++|.++++++++
T Consensus 243 ~~~~~l--~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~ 320 (348)
T TIGR01133 243 NMAAAY--AAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL 320 (348)
T ss_pred CHHHHH--HhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc
Confidence 455667 7899999999988999999999999999763 47888999999999999998777789999999999998
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
|+
T Consensus 321 ~~ 322 (348)
T TIGR01133 321 DP 322 (348)
T ss_pred CH
Confidence 75
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.5e-10 Score=89.75 Aligned_cols=133 Identities=18% Similarity=0.137 Sum_probs=89.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC----CCcEEEEe-cCCCCccccc----cCC--------------CCCE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL----KLPIFWKI-DITNDPVLNA----KTL--------------PDNV 88 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~----~~~~i~~~-~~~~~~~~~~----~~~--------------~~nv 88 (174)
++++++-.||.... ....+..+++++... +..|++.+ +....+++.+ ... .+++
T Consensus 205 ~~~lllLpGSR~ae---~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 281 (396)
T TIGR03492 205 RFRIALLPGSRPPE---AYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTL 281 (396)
T ss_pred CCEEEEECCCCHHH---HHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCce
Confidence 57888888888542 122234555555443 45788877 4332221110 001 1235
Q ss_pred EEeecCCc-hhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc----CceeEecCCCCCHHHHH
Q psy16939 89 FIQKWYPQ-TDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR----GYALIEPIQTLTKQSFL 163 (174)
Q Consensus 89 ~~~~~~p~-~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~----G~g~~l~~~~~~~~~l~ 163 (174)
.+..+..+ .+++ ..||++|+.+|..| .|+++.|+|+|++|...+|. |+..+++. |.++.+.. .+.+.+.
T Consensus 282 ~v~~~~~~~~~~l--~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~--~~~~~l~ 355 (396)
T TIGR03492 282 EVLLGRGAFAEIL--HWADLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS--KNPEQAA 355 (396)
T ss_pred EEEechHhHHHHH--HhCCEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC--CCHHHHH
Confidence 56566544 4456 78999999999866 99999999999999888887 99888774 77777753 3568999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
+++.++++|+
T Consensus 356 ~~l~~ll~d~ 365 (396)
T TIGR03492 356 QVVRQLLADP 365 (396)
T ss_pred HHHHHHHcCH
Confidence 9999998774
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.1e-09 Score=71.17 Aligned_cols=113 Identities=17% Similarity=0.248 Sum_probs=78.3
Q ss_pred EEEEcCCCcCCCCCCHHH-HHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec--CCchhhhcCCCccEEEec
Q psy16939 35 VYMSFGSVVDPTKLSEET-KLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW--YPQTDILAHPNLRLFITH 111 (174)
Q Consensus 35 v~vs~Gs~~~~~~~~~~~-~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~--~p~~~~l~~~~~~~~I~h 111 (174)
+||+.||.... +..-+ ..++.+..+....++|+++|..... ... ..++.+| .+..+-+. ..++++|+|
T Consensus 2 ifVTvGstf~~--f~rlv~k~e~~el~~~i~e~lIvQyGn~d~k-----pva-gl~v~~F~~~~kiQsli-~darIVISH 72 (161)
T COG5017 2 IFVTVGSTFYP--FNRLVLKIEVLELTELIQEELIVQYGNGDIK-----PVA-GLRVYGFDKEEKIQSLI-HDARIVISH 72 (161)
T ss_pred eEEEecCccch--HHHHHhhHHHHHHHHHhhhheeeeecCCCcc-----ccc-ccEEEeechHHHHHHHh-hcceEEEec
Confidence 78999999541 11111 1122222222234899999975533 222 2455555 55555554 367899999
Q ss_pred CChhhHHHHHHcCCCeEeccc--------cchHHHHHHHHHHcCceeEecCCC
Q psy16939 112 GGISSLMEASSLGVPVLGVPF--------FGDQYRNMVLLRHRGYALIEPIQT 156 (174)
Q Consensus 112 gG~~t~~eal~~g~P~i~vP~--------~~dQ~~na~~l~~~G~g~~l~~~~ 156 (174)
+|.||+..++..++|.|++|. ..+|..-|..+++.+.-+.+.+.+
T Consensus 73 aG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte 125 (161)
T COG5017 73 AGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTE 125 (161)
T ss_pred cCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCc
Confidence 999999999999999999996 468999999999999988886543
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.2e-09 Score=86.79 Aligned_cols=135 Identities=15% Similarity=0.034 Sum_probs=90.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC----C-CcEEEEecCCC----Ccccccc-CCCCCEEEeecCCchhhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL----K-LPIFWKIDITN----DPVLNAK-TLPDNVFIQKWYPQTDILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~----~-~~~i~~~~~~~----~~~~~~~-~~~~nv~~~~~~p~~~~l~ 101 (174)
+++|++..||.... .......+++++... + .++++...... ..++.+. .....+....+ +...++
T Consensus 191 ~~~Ilvl~GSR~ae---i~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l- 265 (385)
T TIGR00215 191 GETLALLPGSRGSE---VEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG-DARKAM- 265 (385)
T ss_pred CCEEEEECCCCHHH---HHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc-hHHHHH-
Confidence 57788888888641 133445555444332 2 24555443321 1111110 11223333322 233456
Q ss_pred CCCccEEEecCChhhHHHHHHcCCCeEec----cccc---------hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHH
Q psy16939 102 HPNLRLFITHGGISSLMEASSLGVPVLGV----PFFG---------DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQT 168 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~eal~~g~P~i~v----P~~~---------dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ 168 (174)
..||++|+.+|..|+ |+++.|+|+|++ |+.. .|..|+..+.+.++...+..++++++.|.+++.+
T Consensus 266 -~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ 343 (385)
T TIGR00215 266 -FAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLL 343 (385)
T ss_pred -HhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHH
Confidence 789999999999888 999999999999 7642 2788999999999999988888999999999999
Q ss_pred hhcCC
Q psy16939 169 MLNDP 173 (174)
Q Consensus 169 ll~~~ 173 (174)
+++|+
T Consensus 344 ll~~~ 348 (385)
T TIGR00215 344 LLENG 348 (385)
T ss_pred HhcCC
Confidence 99886
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.1e-08 Score=77.79 Aligned_cols=135 Identities=14% Similarity=0.069 Sum_probs=78.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCCC-ccccc--cCC-CCCEEEeecCCchhhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITND-PVLNA--KTL-PDNVFIQKWYPQTDILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~~-~~~~~--~~~-~~nv~~~~~~p~~~~l~~ 102 (174)
+++|++..||.... .+.....++++++.. +.++++..++... .++.+ ... .-++.+.. -.-..++
T Consensus 186 ~~~il~~~gsr~~~---~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-- 259 (380)
T PRK00025 186 ARVLALLPGSRGQE---IKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD-GQKREAM-- 259 (380)
T ss_pred CCEEEEECCCCHHH---HHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc-ccHHHHH--
Confidence 45667777766431 112344445544322 2367776552221 11111 012 22344332 1234455
Q ss_pred CCccEEEecCChhhHHHHHHcCCCeEecccc--------chHHHH-----HHHHHHcCceeEecCCCCCHHHHHHHHHHh
Q psy16939 103 PNLRLFITHGGISSLMEASSLGVPVLGVPFF--------GDQYRN-----MVLLRHRGYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~--------~dQ~~n-----a~~l~~~G~g~~l~~~~~~~~~l~~al~~l 169 (174)
..||++|+.+|.+++ |++++|+|+|++|.. .+|..| +..+.+.+++..+...+.+++++.+++.++
T Consensus 260 ~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 338 (380)
T PRK00025 260 AAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPL 338 (380)
T ss_pred HhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHH
Confidence 789999999998877 999999999999532 133332 233444444444555667899999999999
Q ss_pred hcCC
Q psy16939 170 LNDP 173 (174)
Q Consensus 170 l~~~ 173 (174)
++|+
T Consensus 339 l~~~ 342 (380)
T PRK00025 339 LADG 342 (380)
T ss_pred hcCH
Confidence 9875
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.9e-06 Score=67.55 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=86.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCCCEEEeecCCchh---hhcCCCccE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD---ILAHPNLRL 107 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~---~l~~~~~~~ 107 (174)
++.+++..|+.... -..+.+-+++..+... +.++++...+.....+. ....|+.+.+++++.+ ++ ..+|+
T Consensus 196 ~~~~i~~~G~~~~~--k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~~~~~--~~~~~v~~~g~~~~~~~~~~~--~~~d~ 269 (364)
T cd03814 196 DRPVLLYVGRLAPE--KNLEALLDADLPLRRRPPVRLVIVGDGPARARLE--ARYPNVHFLGFLDGEELAAAY--ASADV 269 (364)
T ss_pred CCeEEEEEeccccc--cCHHHHHHHHHHhhhcCCceEEEEeCCchHHHHh--ccCCcEEEEeccCHHHHHHHH--HhCCE
Confidence 46677788876531 1233333444444332 34566655433322111 3467899999988665 45 78999
Q ss_pred EEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 108 FITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 108 ~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|..+. .+++.||+++|+|+|+-+..+ +...+++.+.|..+... +.+++.+++.+++.++
T Consensus 270 ~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~~~~--~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 270 FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLVEPG--DAEAFAAALAALLADP 333 (364)
T ss_pred EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEcCCC--CHHHHHHHHHHHHcCH
Confidence 997764 478999999999999987654 44556667888887543 6788999999998875
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.5e-06 Score=70.62 Aligned_cols=131 Identities=14% Similarity=0.098 Sum_probs=86.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFI 109 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I 109 (174)
...+++..|+... ...++.++++++..+ .++++...+....++.+.....++.+.++++..++..+ ..+|++|
T Consensus 262 ~~~~i~~vGrl~~-----~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V 336 (465)
T PLN02871 262 EKPLIVYVGRLGA-----EKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFV 336 (465)
T ss_pred CCeEEEEeCCCch-----hhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEE
Confidence 3566777788753 445667777777764 46666554432222211112357999999976553221 7899999
Q ss_pred ecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHH---cCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 110 THGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH---RGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 110 ~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~---~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.-.. ..++.||+++|+|+|.-...+ ....+++ -+.|..++.+ +.+++.+++.++++|+
T Consensus 337 ~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~~--d~~~la~~i~~ll~~~ 401 (465)
T PLN02871 337 MPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTPG--DVDDCVEKLETLLADP 401 (465)
T ss_pred ECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCCC--CHHHHHHHHHHHHhCH
Confidence 6543 456899999999999875432 2234444 5788888654 6799999999998764
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.5e-06 Score=65.82 Aligned_cols=131 Identities=15% Similarity=0.154 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCCCcc---------c-cccCCCCCEEEeecCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITNDPV---------L-NAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~~~~---------~-~~~~~~~nv~~~~~~p~ 96 (174)
.+.+++..|+..... . ...+++++... +.++++..+...... + .+....+++.+.+++|+
T Consensus 219 ~~~~i~~~gr~~~~k--~---~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 293 (398)
T cd03800 219 DKPRILAVGRLDPRK--G---IDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSR 293 (398)
T ss_pred CCcEEEEEccccccc--C---HHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCH
Confidence 467778888875421 2 33334444332 346666655432110 0 11134578999999997
Q ss_pred hhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 97 TDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 97 ~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.++... ..+|++++. |-..++.||+++|+|+|+-+..+ ....+++.+.|..++.. +.+++.+++.++++
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~~~--~~~~l~~~i~~l~~ 367 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVDPR--DPEALAAALRRLLT 367 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeCCC--CHHHHHHHHHHHHh
Confidence 764221 679999965 33468999999999999876543 44456666789888644 58999999999987
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
++
T Consensus 368 ~~ 369 (398)
T cd03800 368 DP 369 (398)
T ss_pred CH
Confidence 64
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.37 E-value=6e-06 Score=65.72 Aligned_cols=130 Identities=20% Similarity=0.171 Sum_probs=84.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEe--cCCCCcccc---c-cCC-CCCEEEeecCCchh---hh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKI--DITNDPVLN---A-KTL-PDNVFIQKWYPQTD---IL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~--~~~~~~~~~---~-~~~-~~nv~~~~~~p~~~---~l 100 (174)
++.+++++|..... .....+..++++++.... ++.+.. .+....++. . ... .+++.+.++.++.+ ++
T Consensus 198 ~~~vlv~~~r~~~~--~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 275 (363)
T cd03786 198 KKYILVTLHRVENV--DDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLL 275 (363)
T ss_pred CCEEEEEeCCcccc--CChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHH
Confidence 56788888776531 135567777777776533 233333 222111111 1 011 46888887655443 34
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..| +.+.|+++.|+|+|.++.. |. +..+.+.|+++.+.. +.+++.+++.++++++
T Consensus 276 --~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 276 --KNADLVLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLVGT---DPEAILAAIEKLLSDE 338 (363)
T ss_pred --HcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEecCC---CHHHHHHHHHHHhcCc
Confidence 67999999999 7888999999999999643 22 335566787777642 4899999999999875
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.1e-06 Score=65.88 Aligned_cols=132 Identities=20% Similarity=0.171 Sum_probs=86.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCcccc----ccCCCCCEEEeecCCchhhhcC-CCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVLN----AKTLPDNVFIQKWYPQTDILAH-PNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~~----~~~~~~nv~~~~~~p~~~~l~~-~~~ 105 (174)
.+.+++..|.... ......+++++.+.. .++++...+.....+. .....+|+.+.+++++.++..+ ..|
T Consensus 190 ~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a 264 (357)
T cd03795 190 GRPFFLFVGRLVY-----YKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC 264 (357)
T ss_pred CCcEEEEeccccc-----ccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC
Confidence 4677888888753 334666777777666 5666655443211110 1145679999999997542221 679
Q ss_pred cEEEec------CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITH------GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~h------gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|+++.- |...++.||+++|+|+|.-...+....... ..+.|..++.+ +.+++.+++.++++++
T Consensus 265 d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~~--d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 265 DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPPG--DPAALAEAIRRLLEDP 333 (357)
T ss_pred CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCCC--CHHHHHHHHHHHHHCH
Confidence 998832 224579999999999999765444332222 35778777543 6899999999999875
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.6e-06 Score=67.51 Aligned_cols=128 Identities=18% Similarity=0.087 Sum_probs=88.0
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEecC
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFITHG 112 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~hg 112 (174)
..++..|.... ....+.++++++..+.++++...+....++.+ ...+|+.+.+++|+.++... ..||+++.-.
T Consensus 196 ~~il~~G~~~~-----~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps 269 (351)
T cd03804 196 DYYLSVGRLVP-----YKRIDLAIEAFNKLGKRLVVIGDGPELDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPA 269 (351)
T ss_pred CEEEEEEcCcc-----ccChHHHHHHHHHCCCcEEEEECChhHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 34566777653 33467778888888888777665543232222 45789999999997543221 6799998632
Q ss_pred ---ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 113 ---GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 113 ---G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
-..++.||+++|+|+|.....+ ....+.+...|..++.+ +.+++.+++.++++++
T Consensus 270 ~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~~--~~~~la~~i~~l~~~~ 327 (351)
T cd03804 270 EEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEEQ--TVESLAAAVERFEKNE 327 (351)
T ss_pred cCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCCC--CHHHHHHHHHHHHhCc
Confidence 2356789999999999986433 22345555678888644 6888999999999876
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.7e-06 Score=64.23 Aligned_cols=134 Identities=19% Similarity=0.160 Sum_probs=82.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccc---cCCCCCEEEeecCCchhhhcC-CCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNA---KTLPDNVFIQKWYPQTDILAH-PNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~---~~~~~nv~~~~~~p~~~~l~~-~~~~ 106 (174)
++.+++..|+.... -..+.+-+.+..+... +.++++...+.....+.+ ....+|+.+.+++++.++... ..+|
T Consensus 219 ~~~~i~~~G~~~~~--k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 296 (394)
T cd03794 219 DKFVVLYAGNIGRA--QGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAAD 296 (394)
T ss_pred CcEEEEEecCcccc--cCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhC
Confidence 56778888887542 1233333333444333 345555443332221111 134578999999876653221 7799
Q ss_pred EEEecCC---------hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 107 LFITHGG---------ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 107 ~~I~hgG---------~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|.... .+++.||+++|+|+|+-+..+.+.. +...+.|..++.+ +.+++.+++.++++|+
T Consensus 297 i~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 297 VGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEEAGAGLVVPPG--DPEALAAAILELLDDP 366 (394)
T ss_pred eeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hccCCcceEeCCC--CHHHHHHHHHHHHhCh
Confidence 9996433 3347999999999999987654332 2333677777543 6899999999998764
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.5e-05 Score=61.89 Aligned_cols=131 Identities=21% Similarity=0.218 Sum_probs=83.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCCCcccc----ccCCCCCEEEeecCCchhhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITNDPVLN----AKTLPDNVFIQKWYPQTDILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~~~~~~----~~~~~~nv~~~~~~p~~~~l~~ 102 (174)
++..++.+|+... ......+++++... ..++++..++.....+. .....+++.+.++++..++...
T Consensus 198 ~~~~i~~~g~~~~-----~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 272 (374)
T cd03801 198 DEPVILFVGRLVP-----RKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPAL 272 (374)
T ss_pred CCeEEEEecchhh-----hcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHH
Confidence 4677888887753 22233444444332 23555544332211111 1135789999999975543211
Q ss_pred -CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 103 -PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 103 -~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++|.- |..+++.||+++|+|+|+-+.. .....+++.+.|..++.. +.+++.+++.++++++
T Consensus 273 ~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~----~~~~~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 273 YAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG----GIPEVVEDGETGLLVPPG--DPEALAEAILRLLDDP 342 (374)
T ss_pred HHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC----ChhHHhcCCcceEEeCCC--CHHHHHHHHHHHHcCh
Confidence 779999953 5577999999999999987652 344555556788887543 5899999999988765
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.7e-05 Score=59.90 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=83.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccc----cccCCCCCEEEeecCCchhhhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQTDILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~~~~l~~-~~ 104 (174)
.+.+++..|+.... -..+.+-+.++.+.+. +.++++...+.....+ ......+|+.+.+++++.++... .+
T Consensus 201 ~~~~i~~~g~~~~~--k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 278 (377)
T cd03798 201 DKKVILFVGRLVPR--KGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAA 278 (377)
T ss_pred CceEEEEeccCccc--cCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHh
Confidence 56778888887541 1223333333333332 2344444332221111 11134679999999987653221 77
Q ss_pred ccEEEe----cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFIT----HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~----hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||++|. -|..+++.||+++|+|+|+-+..+ ....+.+.+.|..++.. +.+++.+++.++++++
T Consensus 279 ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 279 ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLVPPG--DPEALAEAILRLLADP 345 (377)
T ss_pred cCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEECCC--CHHHHHHHHHHHhcCc
Confidence 999984 356788999999999999866533 33456666667777543 6899999999998875
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.8e-05 Score=60.72 Aligned_cols=131 Identities=19% Similarity=0.206 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC---CCcEEEEecCCCCcccc-ccCCCCCEEEeecCCchhhhcC-CCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL---KLPIFWKIDITNDPVLN-AKTLPDNVFIQKWYPQTDILAH-PNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~---~~~~i~~~~~~~~~~~~-~~~~~~nv~~~~~~p~~~~l~~-~~~~ 106 (174)
.+.+++..|+.... .....+++++... +.++++........... ......++.+.+++++.++... .++|
T Consensus 190 ~~~~i~~~G~~~~~-----k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 264 (359)
T cd03823 190 GRLRFGFIGQLTPH-----KGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264 (359)
T ss_pred CceEEEEEecCccc-----cCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 56777788887542 2233344444333 44666654443222110 0023578999999975554211 7899
Q ss_pred EEEec-----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 107 LFITH-----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 107 ~~I~h-----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|.. |...++.||+++|+|+|.-+..+ ....+.+.+.|..+... +.+++.+++.++++++
T Consensus 265 ~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 265 VLVVPSIWPENFPLVIREALAAGVPVIASDIGG----MAELVRDGVNGLLFPPG--DAEDLAAALERLIDDP 330 (359)
T ss_pred EEEEcCcccCCCChHHHHHHHCCCCEEECCCCC----HHHHhcCCCcEEEECCC--CHHHHHHHHHHHHhCh
Confidence 99943 34457999999999999876532 44556666678888654 5899999999998764
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.8e-05 Score=62.01 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=83.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh--CCCcEEEEecCCCCccc----cccCCCCCEEEeecCCchhhhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ--LKLPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQTDILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~--~~~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~~~~l~~-~~ 104 (174)
++.+++..|+.... -..+.+-+++..+.. .+.++++..++.....+ ......+++.+.+++++.++... ..
T Consensus 201 ~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 278 (374)
T cd03817 201 DEPVLLYVGRLAKE--KNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKA 278 (374)
T ss_pred CCeEEEEEeeeecc--cCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHH
Confidence 46777888876542 123333333333333 23466665544321111 11145679999999987653221 67
Q ss_pred ccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|+++... ...++.||+++|+|+|+.+.. ..+..+.+.+.|..++..+ . ++.+++.++++++
T Consensus 279 ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~~~g~~~~~~~--~-~~~~~i~~l~~~~ 344 (374)
T cd03817 279 ADLFVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADGENGFLFPPGD--E-ALAEALLRLLQDP 344 (374)
T ss_pred cCEEEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecCceeEEeCCCC--H-HHHHHHHHHHhCh
Confidence 99999554 357899999999999987543 2445566667888886543 2 8999999998775
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.5e-05 Score=62.55 Aligned_cols=129 Identities=19% Similarity=0.254 Sum_probs=79.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCC-Ccc-ccc-cCCCCCEEEeecCCchhhhc-CC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITN-DPV-LNA-KTLPDNVFIQKWYPQTDILA-HP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~-~~~-~~~-~~~~~nv~~~~~~p~~~~l~-~~ 103 (174)
+.++++++-... ....+..+++++... +.++++..+++. ... +.+ ....+++++.+.+++.+.+. ..
T Consensus 198 ~~vl~~~hr~~~----~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 273 (365)
T TIGR00236 198 RYILLTLHRREN----VGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAA 273 (365)
T ss_pred CEEEEecCchhh----hhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHH
Confidence 556665543211 112356666665543 345666544321 111 111 12346899988776554321 16
Q ss_pred CccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 104 NLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.+|++|+..|. .+.||+++|+|+|.++..+++.. +.+.|.++.+. .+.+++.+++.++++++
T Consensus 274 ~ad~vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv~---~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 274 NSHLILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLVG---TDKENITKAAKRLLTDP 335 (365)
T ss_pred hCCEEEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhcCceEEeC---CCHHHHHHHHHHHHhCh
Confidence 79999998875 47999999999999976554442 33467776663 26899999999998764
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.0001 Score=57.66 Aligned_cols=132 Identities=14% Similarity=0.087 Sum_probs=79.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCC-cc-c----cccCCCCCEEEeecCCchhhhc-C
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITND-PV-L----NAKTLPDNVFIQKWYPQTDILA-H 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~-~~-~----~~~~~~~nv~~~~~~p~~~~l~-~ 102 (174)
++.+++..|+..... ..+.+-+.+..+... +.++++...+... .. . ......+++.+.+++++.++.. +
T Consensus 202 ~~~~i~~~G~~~~~K--~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 202 DKRIILFLGRLHPKK--GLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred CCcEEEEEeCcchhc--CHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHH
Confidence 567778888775321 222232333333332 2355554332221 10 0 1114568899999998655321 1
Q ss_pred CCccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 103 PNLRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 103 ~~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++|...- ..++.||+++|+|+|+-+..+ ....+.. +.|..... +.+++.+++.++++++
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~-~~~~~~~~---~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY-GCGWVVDD---DVDALAAALRRALELP 346 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc-CceEEeCC---ChHHHHHHHHHHHhCH
Confidence 67999987543 678999999999999976433 2333444 77777753 3489999999998774
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.9e-05 Score=61.49 Aligned_cols=84 Identities=21% Similarity=0.260 Sum_probs=63.9
Q ss_pred CCCCEEEeecCCchhhhcC-CCccEEEecC----------ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEe
Q psy16939 84 LPDNVFIQKWYPQTDILAH-PNLRLFITHG----------GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIE 152 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~-~~~~~~I~hg----------G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l 152 (174)
..+++.+.+++++.++... ..+|++|... -.+++.||+++|+|+|.-+..+ +...+.+.+.|..+
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~~ 318 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLLV 318 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEEE
Confidence 4678999999986554221 7799988633 3578999999999999876543 55666677888888
Q ss_pred cCCCCCHHHHHHHHHHhhcCC
Q psy16939 153 PIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 153 ~~~~~~~~~l~~al~~ll~~~ 173 (174)
+.. +.+++.+++.++++++
T Consensus 319 ~~~--d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 319 PEG--DVAALAAALGRLLADP 337 (367)
T ss_pred CCC--CHHHHHHHHHHHHcCH
Confidence 643 6799999999998874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00011 Score=56.87 Aligned_cols=132 Identities=14% Similarity=0.193 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccc-----cccCCCCCEEEeecCCch-hhhcCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVL-----NAKTLPDNVFIQKWYPQT-DILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~-----~~~~~~~nv~~~~~~p~~-~~l~~~ 103 (174)
++.+++..|+.... -..+.+-+.+..+.+. +.++++..+....... .......++.+.++..+. .++ .
T Consensus 187 ~~~~i~~~G~~~~~--k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~ 262 (359)
T cd03808 187 DDPVFLFVARLLKD--KGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELL--A 262 (359)
T ss_pred CCcEEEEEeccccc--cCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHH--H
Confidence 56788888887542 1333344444444332 2456655444322111 111345688888875443 355 7
Q ss_pred CccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 104 NLRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 104 ~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|++|.... .+++.||+++|+|+|.-+..+ ....+.+.+.|..++.+ +.+++.+++.+++.++
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~~~--~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVPPG--DAEALADAIERLIEDP 330 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEECCC--CHHHHHHHHHHHHhCH
Confidence 8999997654 678999999999999875533 23455556778887543 6899999999988764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00013 Score=57.42 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=81.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCcc----ccccCCCCCEEEeecCCc-hhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQ-TDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~-~~~l~~~~ 104 (174)
.+.+++..|+..... ..+.+-+.+..+.+. +.++++...+..... ..+....+++.+.++..+ ..++ ..
T Consensus 191 ~~~~i~~vGr~~~~K--g~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 266 (358)
T cd03812 191 DKFVIGHVGRFSEQK--NHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELL--QA 266 (358)
T ss_pred CCEEEEEEecccccc--ChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHH--Hh
Confidence 567888888875421 233333333333332 235566543332211 111145678999998544 3455 78
Q ss_pred ccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCCC
Q psy16939 105 LRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174 (174)
Q Consensus 105 ~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~~ 174 (174)
||++|.- |-..++.||+++|+|+|.-...+. ...+.+ +.+.....+ +.+++.+++.++++++.
T Consensus 267 adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i~~-~~~~~~~~~--~~~~~a~~i~~l~~~~~ 333 (358)
T cd03812 267 MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDLTD-LVKFLSLDE--SPEIWAEEILKLKSEDR 333 (358)
T ss_pred cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhhcc-CccEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 9999975 446899999999999998654332 233344 555554322 57999999999998863
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.5e-05 Score=59.38 Aligned_cols=134 Identities=21% Similarity=0.241 Sum_probs=83.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCcc----ccccCCCCCEEEeecCCchhhhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTDILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~~l~~-~~ 104 (174)
.++.++..|..... -..+.+-+.+..+... +.++++...+..... +.+...++|+.+.+++++.++... ..
T Consensus 178 ~~~~i~~~g~~~~~--k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ 255 (355)
T cd03799 178 EPLRILSVGRLVEK--KGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRA 255 (355)
T ss_pred CCeEEEEEeeeccc--cCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHh
Confidence 46677778876431 1233333333444333 235555544332221 111135689999999976553322 67
Q ss_pred ccEEEe----------cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFIT----------HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~----------hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|+++. -|...++.||+++|+|+|+.+..+ ....+.+...|..+... +.+++.+++.++++++
T Consensus 256 adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~~~~--~~~~l~~~i~~~~~~~ 328 (355)
T cd03799 256 ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLVPPG--DPEALADAIERLLDDP 328 (355)
T ss_pred CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEeCCC--CHHHHHHHHHHHHhCH
Confidence 999998 455679999999999999876432 22344444578887543 6899999999988764
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00011 Score=59.36 Aligned_cols=85 Identities=19% Similarity=0.192 Sum_probs=60.0
Q ss_pred CCCCEEEeecCCchhhhcC-CCccEEEecC----C-hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCC
Q psy16939 84 LPDNVFIQKWYPQTDILAH-PNLRLFITHG----G-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL 157 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~-~~~~~~I~hg----G-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~ 157 (174)
...++.+.+++++.++..+ ..+|++|... | ..++.||+++|+|+|+-...+ +...+++...|..+.. ..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l~~-~~ 329 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHLAE-PM 329 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEEeC-CC
Confidence 4568899999886553221 7899999743 2 367889999999999876532 3344555566764421 23
Q ss_pred CHHHHHHHHHHhhcCC
Q psy16939 158 TKQSFLKNAQTMLNDP 173 (174)
Q Consensus 158 ~~~~l~~al~~ll~~~ 173 (174)
+.+++.+++.++++|+
T Consensus 330 d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 330 TSDSIISDINRTLADP 345 (380)
T ss_pred CHHHHHHHHHHHHcCH
Confidence 6899999999999875
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-05 Score=64.33 Aligned_cols=128 Identities=19% Similarity=0.091 Sum_probs=80.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC---cEEEEecCCCCcccccc-CCCCCEEEeecCCchhhhcCCCccE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL---PIFWKIDITNDPVLNAK-TLPDNVFIQKWYPQTDILAHPNLRL 107 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~---~~i~~~~~~~~~~~~~~-~~~~nv~~~~~~p~~~~l~~~~~~~ 107 (174)
+++|.+-.||.... -...+..+.+++..... .|++... ...+.+.+. .....+.+.+ +..+++ ..||+
T Consensus 167 ~~~I~llPGSR~~E---i~~llP~~~~aa~~L~~~~~~~~i~~a-~~~~~i~~~~~~~~~~~~~~--~~~~~m--~~aDl 238 (347)
T PRK14089 167 EGTIAFMPGSRKSE---IKRLMPIFKELAKKLEGKEKILVVPSF-FKGKDLKEIYGDISEFEISY--DTHKAL--LEAEF 238 (347)
T ss_pred CCEEEEECCCCHHH---HHHHHHHHHHHHHHHhhcCcEEEEeCC-CcHHHHHHHHhcCCCcEEec--cHHHHH--HhhhH
Confidence 47899999998641 12445544444443332 3333322 221211110 0111233332 334566 67999
Q ss_pred EEecCChhhHHHHHHcCCCeEec-cccchHHHHHHHHH---HcCceeEe-------------cCCCCCHHHHHHHHHH
Q psy16939 108 FITHGGISSLMEASSLGVPVLGV-PFFGDQYRNMVLLR---HRGYALIE-------------PIQTLTKQSFLKNAQT 168 (174)
Q Consensus 108 ~I~hgG~~t~~eal~~g~P~i~v-P~~~dQ~~na~~l~---~~G~g~~l-------------~~~~~~~~~l~~al~~ 168 (174)
+|+.+|..|+ |++..|+|+|+. .....|+.||+++. ..|+.-.+ -.++.|++.|.+++.+
T Consensus 239 al~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~ 315 (347)
T PRK14089 239 AFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE 315 (347)
T ss_pred HHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH
Confidence 9999999888 999999999995 34678999999999 55666555 3356888888888764
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00028 Score=57.66 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=60.3
Q ss_pred CEEEeecCCch-hhhcCCCccEEEec-----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHH
Q psy16939 87 NVFIQKWYPQT-DILAHPNLRLFITH-----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQ 160 (174)
Q Consensus 87 nv~~~~~~p~~-~~l~~~~~~~~I~h-----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~ 160 (174)
++.+.+..... .++ ..||+++.. +|..++.||+++|+|+|.-|...++......+.+.|+++... +.+
T Consensus 303 ~v~l~~~~~el~~~y--~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~----d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLY--AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE----DAE 376 (425)
T ss_pred cEEEEecHHHHHHHH--HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC----CHH
Confidence 44555544333 344 789985542 455679999999999999998888888777777778777653 679
Q ss_pred HHHHHHHHhhcCC
Q psy16939 161 SFLKNAQTMLNDP 173 (174)
Q Consensus 161 ~l~~al~~ll~~~ 173 (174)
++.+++.++++|+
T Consensus 377 ~La~~l~~ll~~~ 389 (425)
T PRK05749 377 DLAKAVTYLLTDP 389 (425)
T ss_pred HHHHHHHHHhcCH
Confidence 9999999999875
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00015 Score=57.48 Aligned_cols=133 Identities=17% Similarity=0.152 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc----ccccCCCCCEEEeecCCchh-hhcCCCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTD-ILAHPNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~-~l~~~~~~ 106 (174)
.+.+++..|...... ....+++.+.....+.+.++++...+..... ..+....+++.+.++.+... ++ ..+|
T Consensus 196 ~~~~il~~g~l~~~K-~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d 272 (371)
T cd04962 196 GEKVLIHISNFRPVK-RIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELL--SIAD 272 (371)
T ss_pred CCeEEEEeccccccc-CHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHH--HhcC
Confidence 466777788775421 1222232222222223456666554432211 11113456899999876543 45 7799
Q ss_pred EEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 107 LFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 107 ~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|.- |...++.||+++|+|+|+-... ..+..+.+-..|..++.+ +.+++.+++.++++++
T Consensus 273 ~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~~~~--~~~~l~~~i~~l~~~~ 337 (371)
T cd04962 273 LFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLVDVG--DVEAMAEYALSLLEDD 337 (371)
T ss_pred EEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEcCCC--CHHHHHHHHHHHHhCH
Confidence 99944 4456999999999999986543 244555555677776543 6788999999888764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00016 Score=58.79 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=77.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC---C-CcEEEEecCCCCcccc---ccCCCCCEEEeecCCchhhhcC-C
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL---K-LPIFWKIDITNDPVLN---AKTLPDNVFIQKWYPQTDILAH-P 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~---~-~~~i~~~~~~~~~~~~---~~~~~~nv~~~~~~p~~~~l~~-~ 103 (174)
.+.+++..|+... ..-++.++++++.. + .++++...+...+++. +....+|+.+.++++..++..+ .
T Consensus 228 ~~~~i~~~G~l~~-----~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~ 302 (412)
T PRK10307 228 GKKIVLYSGNIGE-----KQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLK 302 (412)
T ss_pred CCEEEEEcCcccc-----ccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHH
Confidence 4567777888753 23345555555443 2 3565544333222111 1012248999999986653221 6
Q ss_pred CccEEEec---CC-----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 104 NLRLFITH---GG-----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 104 ~~~~~I~h---gG-----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.||+++.. ++ .+.+.|++++|+|+|.-...+.. ....+. +.|+.++.+ +.+++.+++.++++|+
T Consensus 303 ~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~~~~--d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 303 MADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCVEPE--SVEALVAAIAALARQA 374 (412)
T ss_pred hcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEeCCC--CHHHHHHHHHHHHhCH
Confidence 78876542 22 23468999999999998653321 112222 678887644 6899999999998764
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00021 Score=55.57 Aligned_cols=131 Identities=17% Similarity=0.193 Sum_probs=77.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCcc---c-c-ccCCCCCEEEeecCCch-hhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPV---L-N-AKTLPDNVFIQKWYPQT-DILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~---~-~-~~~~~~nv~~~~~~p~~-~~l~~~~ 104 (174)
++.+++..|+..... ....+++.+....... +.++++...+..... . . ......++.+.+..+.. .++ ..
T Consensus 192 ~~~~i~~~G~~~~~K-~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 268 (365)
T cd03807 192 DTFLIGIVARLHPQK-DHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALL--NA 268 (365)
T ss_pred CCeEEEEecccchhc-CHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHH--Hh
Confidence 466777888875421 1122222222222222 345666543322111 1 1 11345677777765443 455 77
Q ss_pred ccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|+++.... .+++.||+++|+|+|+-...+ +...+.+ .|..++.+ +.+++.+++.++++++
T Consensus 269 adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~----~~e~~~~--~g~~~~~~--~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 269 LDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGD----NAELVGD--TGFLVPPG--DPEALAEAIEALLADP 333 (365)
T ss_pred CCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCC----hHHHhhc--CCEEeCCC--CHHHHHHHHHHHHhCh
Confidence 999997654 479999999999999865433 3334444 56666543 5889999999998764
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00012 Score=59.67 Aligned_cols=131 Identities=17% Similarity=0.181 Sum_probs=81.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh---CC--CcEEEEecCCCCcc----ccccCCCCCEEEeecCCchhhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ---LK--LPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTDILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~---~~--~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~~l~~ 102 (174)
.+..+++.|.... ..-...++++++. .+ .++++...+...++ +.+..+.+++.+.+|+++.++..+
T Consensus 221 ~~~~il~vGrl~~-----~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~ 295 (406)
T PRK15427 221 TPLEIISVARLTE-----KKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAM 295 (406)
T ss_pred CCeEEEEEeCcch-----hcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHH
Confidence 3566777787753 2223334444432 22 35555444432111 111135678999999987764322
Q ss_pred -CCccEEEecC---------C-hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 103 -PNLRLFITHG---------G-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 103 -~~~~~~I~hg---------G-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|++|.-. | ..++.||+++|+|+|.-...+ ....+++-..|..++.. +.+++.+++.++++
T Consensus 296 l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~lv~~~--d~~~la~ai~~l~~ 369 (406)
T PRK15427 296 LDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGWLVPEN--DAQALAQRLAAFSQ 369 (406)
T ss_pred HHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEEeCCC--CHHHHHHHHHHHHh
Confidence 7899999642 3 367899999999999865432 23344455678887644 68999999999987
Q ss_pred -CC
Q psy16939 172 -DP 173 (174)
Q Consensus 172 -~~ 173 (174)
|+
T Consensus 370 ~d~ 372 (406)
T PRK15427 370 LDT 372 (406)
T ss_pred CCH
Confidence 64
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=97.92 E-value=5.7e-05 Score=59.44 Aligned_cols=130 Identities=16% Similarity=0.179 Sum_probs=77.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccc----cccCCCCCEEEeecCCch-hhhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQT-DILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~~-~~l~~~~~ 105 (174)
++.+++..|+..... .....++.+.....+. +.++++...+....++ .+....+++.+.++..+. .++ ..+
T Consensus 187 ~~~~~l~~g~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 263 (360)
T cd04951 187 DTFVILAVGRLVEAK-DYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYY--NAA 263 (360)
T ss_pred CCEEEEEEeeCchhc-CcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHH--Hhh
Confidence 467788888765321 1223333333322222 3467765544322211 111345789999887543 455 779
Q ss_pred cEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 106 RLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 106 ~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|++|.-.. ..++.||+++|+|+|+-.. ..+...+++ .|..+.. .+.+++.+++.+++++
T Consensus 264 d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~--~g~~~~~--~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 264 DLFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGD--SGLIVPI--SDPEALANKIDEILKM 326 (360)
T ss_pred ceEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecC--CceEeCC--CCHHHHHHHHHHHHhC
Confidence 99988653 6789999999999997543 233444444 3444433 3688999999998743
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0002 Score=56.12 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCc-c--------ccccCCCCCEEEeec-CCchhhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDP-V--------LNAKTLPDNVFIQKW-YPQTDIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~-~--------~~~~~~~~nv~~~~~-~p~~~~l 100 (174)
.+.+++..|+..... ....+++.+.....+. +.++++..+..... . +.+....+++.+.+. ++..++.
T Consensus 184 ~~~~i~~~G~~~~~K-~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 184 GRPVLLTFGLLRPYK-GLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCeEEEEEeeccCCC-CHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 466777778775421 1223333333322222 23555544332111 1 112235678888865 8765432
Q ss_pred cC-CCccEEEec------CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AH-PNLRLFITH------GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~-~~~~~~I~h------gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.+ ..+|++|.- |-.+++.||+++|+|+|.-+..+ ...+...+.|..+... +.+++.+++.++++++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~~--d~~~~~~~l~~l~~~~ 335 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVPPG--DPAALAEAIRRLLADP 335 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEcCC--CHHHHHHHHHHHHcCh
Confidence 22 789999943 44568999999999999877543 2334556778877544 5899999999998874
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.3e-05 Score=53.14 Aligned_cols=129 Identities=18% Similarity=0.222 Sum_probs=82.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEec-CCC---Ccc-ccccCCCCCEEEeecCCch---h
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKID-ITN---DPV-LNAKTLPDNVFIQKWYPQT---D 98 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~-~~~---~~~-~~~~~~~~nv~~~~~~p~~---~ 98 (174)
++.+++..|.... ......+++++..+ +.-.++.+| ... ... ........++.+.++.+.. .
T Consensus 14 ~~~~il~~g~~~~-----~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 14 KKKIILFIGRLDP-----EKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp TSEEEEEESESSG-----GGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCeEEEEEecCcc-----ccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccccccccc
Confidence 6888888888764 22244444444332 222344444 211 010 1111456799999998733 3
Q ss_pred hhcCCCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 99 ILAHPNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 99 ~l~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++ ..+|++++. +...++.||+++|+|+|+-. ...+...+.....|..++.. +.+++.+++.++++++
T Consensus 89 ~~--~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~~~~~~--~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 89 LY--KSSDIFVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGFLFDPN--DIEELADAIEKLLNDP 159 (172)
T ss_dssp HH--HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEEEESTT--SHHHHHHHHHHHHHHH
T ss_pred cc--ccceeccccccccccccccccccccccceeecc----ccCCceeeccccceEEeCCC--CHHHHHHHHHHHHCCH
Confidence 44 669999988 67789999999999999754 33445666666779988654 8899999999998764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00041 Score=54.64 Aligned_cols=82 Identities=18% Similarity=0.183 Sum_probs=58.5
Q ss_pred CCCCEEEeecCC-ch---hhhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCC
Q psy16939 84 LPDNVFIQKWYP-QT---DILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ 155 (174)
Q Consensus 84 ~~~nv~~~~~~p-~~---~~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~ 155 (174)
...++.+.++++ +. .++ ..+|+++... ...++.||+++|+|+|+....+ ....+.+.+.|..++.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~--~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~~~g~~~~~- 314 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIY--SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHGVTGYLAKP- 314 (365)
T ss_pred CCCceEecCCcCCHHHHHHHH--HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCCCceEEeCC-
Confidence 567889999988 33 345 7799999853 3689999999999999865422 1122333356777653
Q ss_pred CCCHHHHHHHHHHhhcCC
Q psy16939 156 TLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 156 ~~~~~~l~~al~~ll~~~ 173 (174)
.+.+++.+++.++++++
T Consensus 315 -~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 315 -GDPEDLAEGIEWLLADP 331 (365)
T ss_pred -CCHHHHHHHHHHHHhCH
Confidence 36789999999988765
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00032 Score=54.13 Aligned_cols=132 Identities=13% Similarity=0.158 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCcc----ccccCCCCCEEEeecCC-chhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPV----LNAKTLPDNVFIQKWYP-QTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p-~~~~l~~~~ 104 (174)
++..++..|+.... -..+.+-+.++.+.+. +.++++...+..... ........++.+.++.. ...++ ..
T Consensus 177 ~~~~i~~~g~~~~~--K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 252 (348)
T cd03820 177 KSKRILAVGRLVPQ--KGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYY--AK 252 (348)
T ss_pred CCcEEEEEEeeccc--cCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHH--Hh
Confidence 45667777776541 1233333333333322 235555443322111 11113456788888743 33455 67
Q ss_pred ccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRG-YALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G-~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||++|.... ..++.||+++|+|+|+-+..+.+. .+.+.+ .|..++.. +.+++.+++.++++|+
T Consensus 253 ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~~~--~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 253 ASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVPNG--DVEALAEALLRLMEDE 320 (348)
T ss_pred CCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeCCC--CHHHHHHHHHHHHcCH
Confidence 999997753 578999999999999876544332 233444 78877543 5799999999998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00024 Score=56.71 Aligned_cols=133 Identities=12% Similarity=0.153 Sum_probs=83.0
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC--CcEEEEecCCCCccc----cccCCCCCEEEeecCCc--hhhhc-CC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK--LPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQ--TDILA-HP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~--~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~--~~~l~-~~ 103 (174)
+.+++..|..... ....+..+++++.... .++++...+...+++ .+..+++++.+.++.++ ..+-. +.
T Consensus 180 ~~~i~~~Grl~~~---~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~ 256 (359)
T PRK09922 180 PAVFLYVGRLKFE---GQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIK 256 (359)
T ss_pred CcEEEEEEEEecc---cCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHh
Confidence 5667777775421 1122455666665543 466665544332211 11135679999999754 22211 15
Q ss_pred CccEEEec----CChhhHHHHHHcCCCeEecc-ccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCCC
Q psy16939 104 NLRLFITH----GGISSLMEASSLGVPVLGVP-FFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174 (174)
Q Consensus 104 ~~~~~I~h----gG~~t~~eal~~g~P~i~vP-~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~~ 174 (174)
.+|++|.. |-..++.||+++|+|+|... ..+ ....+++...|..++.. +.+++.+++.+++++++
T Consensus 257 ~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv~~~--d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 257 NVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELYTPG--NIDEFVGKLNKVISGEV 326 (359)
T ss_pred cCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEECCC--CHHHHHHHHHHHHhCcc
Confidence 68999864 33689999999999999874 322 22345555678777543 78999999999998863
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00071 Score=54.03 Aligned_cols=133 Identities=20% Similarity=0.250 Sum_probs=81.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCCCccc----cccCCCCCEEEeecCCc-hhhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQ-TDILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~-~~~l~ 101 (174)
.+.++++.|...... ....+++.+.+.+.+. +.++++...+....++ .+.....++.+.++..+ ..++
T Consensus 193 ~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 270 (374)
T TIGR03088 193 ESVVVGTVGRLQAVK-DQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALM- 270 (374)
T ss_pred CCeEEEEEecCCccc-CHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHH-
Confidence 467888888876421 2233444444444333 2356665443321111 11134456777776543 3455
Q ss_pred CCCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 102 HPNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 102 ~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++|.- |-..++.||+++|+|+|+-...+ +...+++-..|..++.+ +.+++.+++.++++++
T Consensus 271 -~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~~~--d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 271 -QALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVPPG--DAVALARALQPYVSDP 339 (374)
T ss_pred -HhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeCCC--CHHHHHHHHHHHHhCH
Confidence 779999953 44679999999999999976533 34445555667777543 6789999999988764
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00073 Score=54.60 Aligned_cols=83 Identities=18% Similarity=0.182 Sum_probs=60.8
Q ss_pred CCCCCEEEeecCCchh---hhcCCCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCC
Q psy16939 83 TLPDNVFIQKWYPQTD---ILAHPNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ 155 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~---~l~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~ 155 (174)
...+++.+.++++..+ ++ ..+|+++.- |...++.||+++|+|+|.....+ ....+.+...|..++..
T Consensus 280 ~l~~~v~~~g~~~~~~~~~~l--~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~ 353 (405)
T TIGR03449 280 GIADRVRFLPPRPPEELVHVY--RAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVDGH 353 (405)
T ss_pred CCCceEEECCCCCHHHHHHHH--HhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECCCC
Confidence 3457899999987654 45 779998853 33468999999999999875433 22345555678877543
Q ss_pred CCCHHHHHHHHHHhhcCC
Q psy16939 156 TLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 156 ~~~~~~l~~al~~ll~~~ 173 (174)
+.+++.+++.++++++
T Consensus 354 --d~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 354 --DPADWADALARLLDDP 369 (405)
T ss_pred --CHHHHHHHHHHHHhCH
Confidence 6789999999988764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00047 Score=54.03 Aligned_cols=132 Identities=16% Similarity=0.091 Sum_probs=76.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC--CcEEEEecCCCCcc-cc----ccCCCCCEEEeecCCchhhhcC-C
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK--LPIFWKIDITNDPV-LN----AKTLPDNVFIQKWYPQTDILAH-P 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~--~~~i~~~~~~~~~~-~~----~~~~~~nv~~~~~~p~~~~l~~-~ 103 (174)
.+.+++..|+..... ..+.+-+.+..+.... .++++......... .. +....+++.+.+++++.++..+ .
T Consensus 194 ~~~~i~~~G~~~~~K--~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 194 PRPYFLYVGTIEPRK--NLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred CCCeEEEeCCCcccc--CHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHh
Confidence 456777788875421 2233333333333332 35555443322111 10 1246789999999987653221 6
Q ss_pred CccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 104 NLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 104 ~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.+|+++.. |...++.||+++|+|+|+-...+- ...+. ..|..+... +.+++.+++.++++|+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~----~e~~~--~~~~~~~~~--~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSL----PEVAG--DAALYFDPL--DPEALAAAIERLLEDP 337 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCc----cceec--CceeeeCCC--CHHHHHHHHHHHhcCH
Confidence 78888754 345689999999999998644211 11111 235555433 6899999999988764
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00071 Score=54.44 Aligned_cols=125 Identities=15% Similarity=0.099 Sum_probs=73.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEe
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFIT 110 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~ 110 (174)
+++++..|+... ....+.+.++++ .. +.++++....+...+.......+|+++.+++|+.++..+ ..+|++|.
T Consensus 205 ~~~i~y~G~l~~--~~d~~ll~~la~---~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~ 279 (373)
T cd04950 205 RPVIGYYGAIAE--WLDLELLEALAK---ARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAIL 279 (373)
T ss_pred CCEEEEEecccc--ccCHHHHHHHHH---HCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEec
Confidence 556777788764 123344444333 33 346666554312111111122479999999987764332 67898875
Q ss_pred c--------CC-hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 111 H--------GG-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 111 h--------gG-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
- ++ ...+.|++++|+|+|.-+.. ...+..+.++.+. + +.+++.+++++++.+
T Consensus 280 P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~~~~~~~~~~~-~--d~~~~~~ai~~~l~~ 340 (373)
T cd04950 280 PFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVRRYEDEVVLIA-D--DPEEFVAAIEKALLE 340 (373)
T ss_pred CCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHHhhcCcEEEeC-C--CHHHHHHHHHHHHhc
Confidence 3 22 34699999999999987632 1222233333332 2 689999999997654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00052 Score=55.52 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=60.1
Q ss_pred CCCEEEeecCCchhhhcC-CCccEEEecC---C-hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCH
Q psy16939 85 PDNVFIQKWYPQTDILAH-PNLRLFITHG---G-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTK 159 (174)
Q Consensus 85 ~~nv~~~~~~p~~~~l~~-~~~~~~I~hg---G-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~ 159 (174)
.+++.+.+++|+.++..+ ..+|+++.-. | ..++.||+++|+|+|.-... .....+..-..|..++.. +.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~~~G~lv~~~--d~ 353 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDGENGLLVDFF--DP 353 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccCCceEEcCCC--CH
Confidence 468999999987664321 6789888532 2 34799999999999986442 334455555578877543 58
Q ss_pred HHHHHHHHHhhcCC
Q psy16939 160 QSFLKNAQTMLNDP 173 (174)
Q Consensus 160 ~~l~~al~~ll~~~ 173 (174)
+++.+++.++++++
T Consensus 354 ~~la~~i~~ll~~~ 367 (396)
T cd03818 354 DALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHHHhCH
Confidence 99999999999875
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.002 Score=50.60 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=79.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccc--------cccCCCCCEEEeecCCch-hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVL--------NAKTLPDNVFIQKWYPQT-DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~--------~~~~~~~nv~~~~~~p~~-~~l 100 (174)
...+++..|..... -..+.+-+.+..+... +.++++...+...... .+....+++.+.++.+.. .++
T Consensus 184 ~~~~i~~~Gr~~~~--Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l 261 (355)
T cd03819 184 GKPVILLPGRLTRW--KGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAY 261 (355)
T ss_pred CceEEEEeeccccc--cCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHH
Confidence 46677777876532 2344444445555443 3455555443221111 111345789999985443 345
Q ss_pred cCCCccEEEecC-----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 101 AHPNLRLFITHG-----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 101 ~~~~~~~~I~hg-----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|++|.-. ...++.||+++|+|+|+-...+ ....+.+.+.|..++.+ +.+++.+++.+++.
T Consensus 262 --~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~~~g~~~~~~--~~~~l~~~i~~~~~ 329 (355)
T cd03819 262 --ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPGETGLLVPPG--DAEALAQALDQILS 329 (355)
T ss_pred --HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCCCceEEeCCC--CHHHHHHHHHHHHh
Confidence 7799999754 2469999999999999865432 23455555578887543 68899999865553
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00085 Score=54.69 Aligned_cols=85 Identities=16% Similarity=0.268 Sum_probs=60.9
Q ss_pred CCCCEEEeecCCchhhh---cCCCccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCC
Q psy16939 84 LPDNVFIQKWYPQTDIL---AHPNLRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQT 156 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l---~~~~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~ 156 (174)
...++.+.+++++.++. ....+|+++...- ..+++||+++|+|+|.-...+ ....+.+.+.|..+.. .
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~~~-~ 361 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLLSK-D 361 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEeCC-C
Confidence 34679999999977533 2245788876543 568999999999999864332 3345555557888753 3
Q ss_pred CCHHHHHHHHHHhhcCC
Q psy16939 157 LTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 157 ~~~~~l~~al~~ll~~~ 173 (174)
.+.+++.+++.++++|+
T Consensus 362 ~~~~~la~~I~~ll~~~ 378 (407)
T cd04946 362 PTPNELVSSLSKFIDNE 378 (407)
T ss_pred CCHHHHHHHHHHHHhCH
Confidence 36899999999998764
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0018 Score=51.56 Aligned_cols=140 Identities=14% Similarity=0.130 Sum_probs=85.2
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCC-CCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe-ecCCch
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTK-LSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ-KWYPQT 97 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~ 97 (174)
++++.+-+...+++.|++=+.+...... .....+.++++.++..+..++...+.....+..+ .. ++.+. .-++..
T Consensus 167 d~~vl~~lg~~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~~~~~-~~--~~~i~~~~vd~~ 243 (335)
T PF04007_consen 167 DPEVLKELGLDDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQRELFE-KY--GVIIPPEPVDGL 243 (335)
T ss_pred ChhHHHHcCCCCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchhhHHh-cc--CccccCCCCCHH
Confidence 3444444553346888887776543221 2346688899999988876444433333322111 11 23332 235555
Q ss_pred hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhh
Q psy16939 98 DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 98 ~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
+++.+ ||++|+-|| ++..||...|+|.|-+ +.++-...-+++.+.|.-... .+.+++.+.+++.+
T Consensus 244 ~Ll~~--a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gll~~~----~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 244 DLLYY--ADLVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGLLYHS----TDPDEIVEYVRKNL 308 (335)
T ss_pred HHHHh--cCEEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCCeEec----CCHHHHHHHHHHhh
Confidence 78854 999999988 7899999999999986 223333344667788873333 25677776665544
|
They are found in archaea and some bacteria and have no known function. |
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=97.64 E-value=1.6e-05 Score=51.85 Aligned_cols=73 Identities=18% Similarity=0.131 Sum_probs=53.3
Q ss_pred cccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCH--HHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEE
Q psy16939 15 CFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSE--ETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVF 89 (174)
Q Consensus 15 ~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~--~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~ 89 (174)
.+++.+..+..|+...+ +|.|+||+|+......... ..+..++++++.++..++...+.....++ ..+|+|++
T Consensus 22 VPyNG~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~l--g~lP~nVR 97 (97)
T PF06722_consen 22 VPYNGPAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAEL--GELPDNVR 97 (97)
T ss_dssp ----SSEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGC--CS-TTTEE
T ss_pred cCCCCCCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhh--CCCCCCCC
Confidence 34456677888998887 8999999999976311122 48999999999999999999988765533 16788875
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0011 Score=53.07 Aligned_cols=131 Identities=15% Similarity=0.226 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCcc----ccc--cCC---CCCEEEe-ecCCchh-
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPV----LNA--KTL---PDNVFIQ-KWYPQTD- 98 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~----~~~--~~~---~~nv~~~-~~~p~~~- 98 (174)
...+++..|.... ..-...++++++.. +.++++..++...++ +.+ +.. ..++.+. ++++..+
T Consensus 200 ~~~~i~~~Grl~~-----~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 200 SRPYILFVGRITR-----QKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred CceEEEEEccccc-----ccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 3456777787753 33355566666655 346666554432211 100 011 2345544 4666544
Q ss_pred --hhcCCCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCC----HHHHHHHHHH
Q psy16939 99 --ILAHPNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLT----KQSFLKNAQT 168 (174)
Q Consensus 99 --~l~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~----~~~l~~al~~ 168 (174)
++ ..+|++|.- +-..++.||+++|+|+|+-...+ ....++....|..++..+.+ .+++.+++.+
T Consensus 275 ~~~~--~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~----~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 275 VELL--SNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGG----IPEVVVDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHH--HhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCC----HHHHhhCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 44 779999974 23457899999999999875432 44555666678888655422 2789999998
Q ss_pred hhcCC
Q psy16939 169 MLNDP 173 (174)
Q Consensus 169 ll~~~ 173 (174)
+++++
T Consensus 349 l~~~~ 353 (388)
T TIGR02149 349 LLADP 353 (388)
T ss_pred HHhCH
Confidence 88764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0011 Score=51.21 Aligned_cols=131 Identities=18% Similarity=0.202 Sum_probs=78.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCcc----ccccCCCCCEEEeecCCchh-hhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTD-ILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~-~l~~~~ 104 (174)
++.+++..|+.... -..+.+-+.+..+... +.++++...+..... .......+++.+.++.+... ++ ..
T Consensus 188 ~~~~i~~~g~~~~~--k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 263 (353)
T cd03811 188 DGPVILAVGRLSPQ--KGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYL--KA 263 (353)
T ss_pred CceEEEEEecchhh--cChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHH--Hh
Confidence 56788888887531 1222233333333332 335555443322111 11113467899999876543 45 67
Q ss_pred ccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHH---HHHHHHhhcC
Q psy16939 105 LRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSF---LKNAQTMLND 172 (174)
Q Consensus 105 ~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l---~~al~~ll~~ 172 (174)
+|++|.- |..+++.||+++|+|+|+-... .....+.+...|..++.+ +.+.+ .+++.++..+
T Consensus 264 ~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 264 ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLVPVG--DEAALAAAALALLDLLLD 332 (353)
T ss_pred CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEECCC--CHHHHHHHHHHHHhccCC
Confidence 9999854 3467899999999999986443 445667777888888654 45666 4555555544
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00042 Score=56.62 Aligned_cols=79 Identities=16% Similarity=0.236 Sum_probs=56.4
Q ss_pred CCEEEe-ecCCchhhhcC-CCccEEEe----c---CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCC
Q psy16939 86 DNVFIQ-KWYPQTDILAH-PNLRLFIT----H---GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQT 156 (174)
Q Consensus 86 ~nv~~~-~~~p~~~~l~~-~~~~~~I~----h---gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~ 156 (174)
+|+.+. +|++..++-.. ..+|+++. . |-..++.||+++|+|+|.-... .....+++.+.|+.++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv~--- 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVFG--- 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEEC---
Confidence 455554 57775554221 78999984 1 1245799999999999986432 3445666777888873
Q ss_pred CCHHHHHHHHHHhhcC
Q psy16939 157 LTKQSFLKNAQTMLND 172 (174)
Q Consensus 157 ~~~~~l~~al~~ll~~ 172 (174)
+.+++.+++.++++|
T Consensus 367 -d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 -DSEELAEQLIDLLSN 381 (415)
T ss_pred -CHHHHHHHHHHHHhc
Confidence 689999999999987
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00022 Score=48.60 Aligned_cols=125 Identities=17% Similarity=0.164 Sum_probs=63.7
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-C-CcEEEEecCCCCccccccCCCCCEEEeecCCch-hhhcCCCccEEEe
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQL-K-LPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT-DILAHPNLRLFIT 110 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~-~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~~l~~~~~~~~I~ 110 (174)
+.++++|+..... ....+++++++.+.+. + .++.+..+... ++.+ ...+|+.+.++++.. +++ ..+|++|.
T Consensus 3 ~~i~~~g~~~~~k-~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~-~~~~~v~~~g~~~e~~~~l--~~~dv~l~ 76 (135)
T PF13692_consen 3 LYIGYLGRIRPDK-GLEELIEAALERLKEKHPDIELIIIGNGPD--ELKR-LRRPNVRFHGFVEELPEIL--AAADVGLI 76 (135)
T ss_dssp EEEE--S-SSGGG-THHHHHH-HHHHHHHHSTTEEEEEECESS---HHCC-HHHCTEEEE-S-HHHHHHH--HC-SEEEE
T ss_pred ccccccccccccc-cccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHH-hcCCCEEEcCCHHHHHHHH--HhCCEEEE
Confidence 4556666664311 1122333244444433 3 35555433222 2211 125699999998532 244 66888887
Q ss_pred cC-----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 111 HG-----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 111 hg-----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
-. -.+++.|++++|+|+|.-+. ......+..+.|..+ .+ +.+++.++++++++|
T Consensus 77 p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~~~~~~~-~~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 77 PSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEEDGCGVLV-AN--DPEELAEAIERLLND 135 (135)
T ss_dssp -BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred EeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeecCCeEEE-CC--CHHHHHHHHHHHhcC
Confidence 32 24899999999999999765 122344446778777 22 799999999999876
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0028 Score=51.08 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC--C---c-cccccC-CCCCEEEeecCCchhhhcC-C
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN--D---P-VLNAKT-LPDNVFIQKWYPQTDILAH-P 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~--~---~-~~~~~~-~~~nv~~~~~~p~~~~l~~-~ 103 (174)
++.++|++=........+.+.+.++++++...+..+++.+.... . . .+.+.. ..+|+.+.+.+++.+++.. .
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~ 280 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLK 280 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHH
Confidence 47888888544322224567899999999888755555542211 1 0 111101 1468999987766554322 6
Q ss_pred CccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHhhc
Q psy16939 104 NLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI-EPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~-l~~~~~~~~~l~~al~~ll~ 171 (174)
.|+++|+.++.+. .||.+.|+|+|.+-. -| ...+.|..+. +. .+.++|.++++++++
T Consensus 281 ~a~~vitdSSggi-~EA~~lg~Pvv~l~~--R~-----e~~~~g~nvl~vg---~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 281 NADAVIGNSSSGI-IEAPSFGVPTINIGT--RQ-----KGRLRADSVIDVD---PDKEEIVKAIEKLLD 338 (365)
T ss_pred hCCEEEEcChhHH-HhhhhcCCCEEeecC--Cc-----hhhhhcCeEEEeC---CCHHHHHHHHHHHhC
Confidence 7999999997666 999999999997731 11 1113354444 42 367889999888554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0025 Score=51.05 Aligned_cols=82 Identities=20% Similarity=0.200 Sum_probs=59.6
Q ss_pred CCCCCEEEeecCCchh---hhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCC
Q psy16939 83 TLPDNVFIQKWYPQTD---ILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ 155 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~---~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~ 155 (174)
...+++.+.++++..+ ++ ..+|+++... -..++.||+++|+|+|..-..+ ....+.+.+.|..+..
T Consensus 277 ~l~~~V~f~g~~~~~~~~~~l--~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~~~- 349 (392)
T cd03805 277 LLEDQVIFLPSISDSQKELLL--SSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLCEP- 349 (392)
T ss_pred CCCceEEEeCCCChHHHHHHH--hhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEeCC-
Confidence 3567999999998764 44 7799998532 2367899999999999874332 2233444566777642
Q ss_pred CCCHHHHHHHHHHhhcCC
Q psy16939 156 TLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 156 ~~~~~~l~~al~~ll~~~ 173 (174)
+.+++.+++.++++++
T Consensus 350 --~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 350 --TPEEFAEAMLKLANDP 365 (392)
T ss_pred --CHHHHHHHHHHHHhCh
Confidence 6889999999998875
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0016 Score=52.43 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=54.9
Q ss_pred CCEEEee-cCCchhhhc-CCCccEEEec-------CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCC
Q psy16939 86 DNVFIQK-WYPQTDILA-HPNLRLFITH-------GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQT 156 (174)
Q Consensus 86 ~nv~~~~-~~p~~~~l~-~~~~~~~I~h-------gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~ 156 (174)
+|+.+.. |+|..++-. +..+|+++.. |=.+++.||+++|+|+|.....+ +...+++-+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~eiv~~g~~G~lv~--- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGELVKDGKNGLLFS--- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHHccCCCCeEEEC---
Confidence 4577655 677665422 1789999841 11357999999999999975322 556667777899885
Q ss_pred CCHHHHHHHHHHhh
Q psy16939 157 LTKQSFLKNAQTML 170 (174)
Q Consensus 157 ~~~~~l~~al~~ll 170 (174)
+.+++.+++.+++
T Consensus 359 -~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -SSSELADQLLELL 371 (371)
T ss_pred -CHHHHHHHHHHhC
Confidence 4789999998875
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0019 Score=51.46 Aligned_cols=134 Identities=18% Similarity=0.183 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCcc----ccccCCCCCEEEeecCCchh-hhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTD-ILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~-~l~~~~~ 105 (174)
++..++..|...... .....++.+.....+.+ .++++...+..... ......++++.+.++.++.. ++ ..|
T Consensus 203 ~~~~i~~vgrl~~~K-~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 279 (372)
T cd04949 203 KPHKIITVARLAPEK-QLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVY--QKA 279 (372)
T ss_pred CCCeEEEEEccCccc-CHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHH--hhh
Confidence 355667777764311 12233333333333333 36666544332111 11113567888888765443 45 678
Q ss_pred cEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++|.-. ...++.||+++|+|+|.-.... .....+..-..|..++.. +.+++.++|.++++++
T Consensus 280 d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~~--d~~~la~~i~~ll~~~ 346 (372)
T cd04949 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPKG--DIEALAEAIIELLNDP 346 (372)
T ss_pred hEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCCC--cHHHHHHHHHHHHcCH
Confidence 8888643 3568999999999999864321 123445556788888643 6899999999999875
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0042 Score=50.37 Aligned_cols=141 Identities=15% Similarity=0.091 Sum_probs=92.4
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-C-cEEEEecCCC-Cc--------------ccccc-
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-L-PIFWKIDITN-DP--------------VLNAK- 82 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~-~~i~~~~~~~-~~--------------~~~~~- 82 (174)
+...|-..-+ ...+.|..+|... .++..-++..++.+.. . ..||+=+..+ .. +....
T Consensus 219 ~~~~~r~~l~~~r~v~iaaSTH~G----Eeei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~ 294 (419)
T COG1519 219 ELAALRRQLGGHRPVWVAASTHEG----EEEIILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGD 294 (419)
T ss_pred HHHHHHHhcCCCCceEEEecCCCc----hHHHHHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCC
Confidence 3444444444 2578888888654 5665666666555443 2 4555433311 00 00000
Q ss_pred --CCCCCEEEeecCCchhhhcCCCccEEEe------cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecC
Q psy16939 83 --TLPDNVFIQKWYPQTDILAHPNLRLFIT------HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154 (174)
Q Consensus 83 --~~~~nv~~~~~~p~~~~l~~~~~~~~I~------hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~ 154 (174)
....++.+.+-+--+.++. .-+|+.+- +||.| ..|.++.|+|+|.=|....|.+-++.+.+.|+++.++
T Consensus 295 ~~~~~tdV~l~DtmGEL~l~y-~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~- 371 (419)
T COG1519 295 PPFSDTDVLLGDTMGELGLLY-GIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE- 371 (419)
T ss_pred CCCCCCcEEEEecHhHHHHHH-hhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC-
Confidence 1234788888776555442 67777654 66654 8899999999999999999999999999999999996
Q ss_pred CCCCHHHHHHHHHHhhcC
Q psy16939 155 QTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~ 172 (174)
+.+.+..++..+++|
T Consensus 372 ---~~~~l~~~v~~l~~~ 386 (419)
T COG1519 372 ---DADLLAKAVELLLAD 386 (419)
T ss_pred ---CHHHHHHHHHHhcCC
Confidence 356677777766665
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0043 Score=54.02 Aligned_cols=132 Identities=14% Similarity=0.034 Sum_probs=80.4
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCcc----ccccCCCCCEEEeecCCchh-hhcCCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTD-ILAHPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~-~l~~~~~~ 106 (174)
..++...|...... ....+++.+...+.+.+ .++++...+..... ..+..+.+++.+.+|.++.. ++ ..+|
T Consensus 517 ~~vIg~VGRL~~~K-G~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll--~aaD 593 (694)
T PRK15179 517 RFTVGTVMRVDDNK-RPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWL--TQFN 593 (694)
T ss_pred CeEEEEEEeCCccC-CHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHH--HhcC
Confidence 45666777764311 12233444434443444 36655544332211 11113568899999976544 44 7799
Q ss_pred EEEec---CC-hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 107 LFITH---GG-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 107 ~~I~h---gG-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+++.- .| .+++.||+++|+|+|.-...+ ....+.+-..|+.+..++.+.+++.+++.+++.
T Consensus 594 v~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~ 658 (694)
T PRK15179 594 AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEGVTGLTLPADTVTAPDVAEALARIHD 658 (694)
T ss_pred EEEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHh
Confidence 99863 33 678999999999999875432 334455556788887766666777777766654
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0025 Score=52.43 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=58.9
Q ss_pred CCCCEEEeecCCchhhhcC-CC----ccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecC
Q psy16939 84 LPDNVFIQKWYPQTDILAH-PN----LRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~-~~----~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~ 154 (174)
+.+++.+.+++++.++... .. +|+++... =..++.||+++|+|+|.-...+ ....+.+...|+.++.
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv~~ 390 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLVDV 390 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEeCC
Confidence 4577888888776554211 33 38988653 2469999999999999875432 3344445567888765
Q ss_pred CCCCHHHHHHHHHHhhcCC
Q psy16939 155 QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~~ 173 (174)
. +.+++.+++.++++|+
T Consensus 391 ~--d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 391 L--DLEAIASALEDALSDS 407 (439)
T ss_pred C--CHHHHHHHHHHHHhCH
Confidence 4 6889999999998774
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0023 Score=51.79 Aligned_cols=127 Identities=14% Similarity=0.170 Sum_probs=75.4
Q ss_pred eEEEEcCCCcCCCCCCHHHHH----HHHHHHh-hCC-CcEEEEecCCCCccccccCCCCCEEEeecCCchh-hhcCCCcc
Q psy16939 34 FVYMSFGSVVDPTKLSEETKL----GFLEVFK-QLK-LPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD-ILAHPNLR 106 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~----~i~~~l~-~~~-~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~-~l~~~~~~ 106 (174)
.+++..|+..... ..+.+. ++...+. ..+ .++++..++.. ..+.+....+++.+.+++++.. .+ ..+|
T Consensus 225 ~~ilf~G~l~~~k--~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-~~~~~l~~~~~V~~~G~v~~~~~~~--~~ad 299 (397)
T TIGR03087 225 RVLVFTGAMDYWP--NIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-PAVRALAALPGVTVTGSVADVRPYL--AHAA 299 (397)
T ss_pred cEEEEEEecCCcc--CHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-HHHHHhccCCCeEEeeecCCHHHHH--HhCC
Confidence 4566678765421 222222 2222232 223 46655443322 2221112356899999988544 44 7799
Q ss_pred EEEec----CCh-hhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 107 LFITH----GGI-SSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 107 ~~I~h----gG~-~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|.- .|. +.+.||+++|+|+|.-+...+.. ....|.|+.+. .+.+++.+++.++++|+
T Consensus 300 v~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~---~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 300 VAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA---ADPADFAAAILALLANP 363 (397)
T ss_pred EEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC---CCHHHHHHHHHHHHcCH
Confidence 99842 343 36999999999999987532211 12346677764 37899999999998875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0095 Score=47.69 Aligned_cols=131 Identities=10% Similarity=-0.004 Sum_probs=74.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCC--------cccc-ccCCCCCEEEeecC--Cchh-
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITND--------PVLN-AKTLPDNVFIQKWY--PQTD- 98 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~--------~~~~-~~~~~~nv~~~~~~--p~~~- 98 (174)
...+++..|...... ....+++.+....... +.++++..++... .+.. .....+++.+.++. +..+
T Consensus 189 ~~~~i~~vgrl~~~K-g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 267 (372)
T cd03792 189 ERPYITQVSRFDPWK-DPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEV 267 (372)
T ss_pred CCcEEEEEecccccc-CcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHH
Confidence 456777788875422 1222333332222222 3466665544221 1111 11345678888876 4333
Q ss_pred --hhcCCCccEEEecCC----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 99 --ILAHPNLRLFITHGG----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 99 --~l~~~~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
++ ..+|+++...- ..++.||+++|+|+|+-...+ ....+.+-..|..++ +.+.+..++.+++++
T Consensus 268 ~~~~--~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~~----~~~~~a~~i~~ll~~ 337 (372)
T cd03792 268 NALQ--RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLVD----TVEEAAVRILYLLRD 337 (372)
T ss_pred HHHH--HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEeC----CcHHHHHHHHHHHcC
Confidence 34 78999996542 459999999999999875432 123344456677654 356677788888766
Q ss_pred C
Q psy16939 173 P 173 (174)
Q Consensus 173 ~ 173 (174)
+
T Consensus 338 ~ 338 (372)
T cd03792 338 P 338 (372)
T ss_pred H
Confidence 4
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0026 Score=52.61 Aligned_cols=120 Identities=19% Similarity=0.276 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-----c-cccc-CCCCCEEEeecCCchhhh-cC
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-----V-LNAK-TLPDNVFIQKWYPQTDIL-AH 102 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-----~-~~~~-~~~~nv~~~~~~p~~~~l-~~ 102 (174)
+..++|.+|..... +.++.+..-.+.|++.|...+|........ + +.+. -.++++.+.+..+..+.+ .+
T Consensus 283 ~d~vvF~~fn~~~K---I~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~ 359 (468)
T PF13844_consen 283 EDAVVFGSFNNLFK---ISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRY 359 (468)
T ss_dssp SSSEEEEE-S-GGG-----HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHG
T ss_pred CCceEEEecCcccc---CCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHh
Confidence 35788888888876 789999999999999999888876543211 1 1111 234678888887765543 23
Q ss_pred CCccEEEe---cCChhhHHHHHHcCCCeEecccc-chHHHHHHHHHHcCceeEec
Q psy16939 103 PNLRLFIT---HGGISSLMEASSLGVPVLGVPFF-GDQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 103 ~~~~~~I~---hgG~~t~~eal~~g~P~i~vP~~-~dQ~~na~~l~~~G~g~~l~ 153 (174)
..+|+++. .+|.+|++|||..|+|+|..|-. .-.+.-+..+...|+...+-
T Consensus 360 ~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 360 QLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp GG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred hhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 66999885 46889999999999999999853 34555667778888887654
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0015 Score=52.26 Aligned_cols=134 Identities=19% Similarity=0.232 Sum_probs=75.4
Q ss_pred cCCCCeEEEEcCCCcCCC-CCCHHHHHHHHHHHhhC-CCcEEEEecCCC-----CccccccCCCCCEEEeecCCchhhhc
Q psy16939 29 AAKGGFVYMSFGSVVDPT-KLSEETKLGFLEVFKQL-KLPIFWKIDITN-----DPVLNAKTLPDNVFIQKWYPQTDILA 101 (174)
Q Consensus 29 ~~~~~~v~vs~Gs~~~~~-~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~-----~~~~~~~~~~~nv~~~~~~p~~~~l~ 101 (174)
..+++.+++++=...... ......+.++++++.+. +.++||...... ..+... .. +|+++.+.+++.+.+.
T Consensus 177 ~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~-~~-~~v~~~~~l~~~~~l~ 254 (346)
T PF02350_consen 177 DAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLK-KY-DNVRLIEPLGYEEYLS 254 (346)
T ss_dssp CTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHT-T--TTEEEE----HHHHHH
T ss_pred ccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhc-cc-CCEEEECCCCHHHHHH
Confidence 344789999994433311 01234566666666666 568999887322 111011 33 5999998876554332
Q ss_pred C-CCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 102 H-PNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 102 ~-~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
. ..|+++|+..| |-.-||.+.|+|+|.+=..++. ......|..+.+. .+.+++.+++++++++
T Consensus 255 ll~~a~~vvgdSs-GI~eEa~~lg~P~v~iR~~geR----qe~r~~~~nvlv~---~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 255 LLKNADLVVGDSS-GIQEEAPSLGKPVVNIRDSGER----QEGRERGSNVLVG---TDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHESEEEESSH-HHHHHGGGGT--EEECSSS-S-----HHHHHTTSEEEET---SSHHHHHHHHHHHHH-
T ss_pred HHhcceEEEEcCc-cHHHHHHHhCCeEEEecCCCCC----HHHHhhcceEEeC---CCHHHHHHHHHHHHhC
Confidence 1 66999999999 5555999999999999222221 1223446666654 4789999999998865
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.002 Score=50.71 Aligned_cols=125 Identities=19% Similarity=0.227 Sum_probs=73.1
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC--CcEEEEecCCCCcc----cc-ccCCCCCEEEeecCCchhhhcC-CCc
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLK--LPIFWKIDITNDPV----LN-AKTLPDNVFIQKWYPQTDILAH-PNL 105 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~--~~~i~~~~~~~~~~----~~-~~~~~~nv~~~~~~p~~~~l~~-~~~ 105 (174)
..++..|.... ..-...++++++... .++++..++....+ +. .....+++.+.+++++.++..+ ..+
T Consensus 194 ~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a 268 (363)
T cd04955 194 RYYLLVGRIVP-----ENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYA 268 (363)
T ss_pred cEEEEEecccc-----cCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhC
Confidence 34566787753 223555666666554 46666554322111 11 1145679999999988753322 678
Q ss_pred cEEEecCCh-----hhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHGGI-----SSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hgG~-----~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|+++.+.-. .++.||+++|+|+|+-...+. ...+.. .|..+... +.+.+++.++++++
T Consensus 269 d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~~~~----~~l~~~i~~l~~~~ 331 (363)
T cd04955 269 ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYFKVG----DDLASLLEELEADP 331 (363)
T ss_pred CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEecCc----hHHHHHHHHHHhCH
Confidence 888876543 579999999999998754321 111122 34444322 22888888877663
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0042 Score=50.27 Aligned_cols=131 Identities=13% Similarity=0.129 Sum_probs=75.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh-hCC-CcEEEEecCCCCcc----ccccCCCCCEEEeecCCchhhhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK-QLK-LPIFWKIDITNDPV----LNAKTLPDNVFIQKWYPQTDILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-~~~-~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~~p~~~~l~~-~~ 104 (174)
++.+++..|...... ..+.+-+.+..+. ..+ .++++...+..... +.+..+.+++.+.++++..++... +.
T Consensus 192 ~~~~i~~~grl~~~K--g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 192 DKITIVVISRLVYRK--GIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred CceEEEEEeccchhc--CHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 466788888775421 2222222222232 222 35666554432211 111134678999999986553222 78
Q ss_pred ccEEEecC---Ch-hhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 105 LRLFITHG---GI-SSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 105 ~~~~I~hg---G~-~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
+|+++.-. |. .++.||+++|+|+|+-+..+- ...+.+ |.+..... +.+++.+++.+++++
T Consensus 270 ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i~~-~~~~~~~~---~~~~l~~~l~~~l~~ 333 (398)
T cd03796 270 GHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVLPP-DMILLAEP---DVESIVRKLEEAISI 333 (398)
T ss_pred CCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhheeC-CceeecCC---CHHHHHHHHHHHHhC
Confidence 99998643 22 499999999999998765331 223322 33433322 678899999888765
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0067 Score=50.50 Aligned_cols=133 Identities=20% Similarity=0.190 Sum_probs=79.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCc-------c-ccccCCCCCEEEeecCCchhhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDP-------V-LNAKTLPDNVFIQKWYPQTDILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~-------~-~~~~~~~~nv~~~~~~p~~~~l~~ 102 (174)
.+.+++..|...... ....+++.+....+..+ .++++..++...+ + ..+..+.+++.+.+.....+++
T Consensus 292 ~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l-- 368 (475)
T cd03813 292 EPPVVGLIGRVVPIK-DIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEYL-- 368 (475)
T ss_pred CCcEEEEEecccccc-CHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHH--
Confidence 466777888875421 11222333322222223 3555543332211 0 1111356789999866666677
Q ss_pred CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc------CceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR------GYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~------G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
.++|+++.. |-..++.||+++|+|+|.-... .....+.+. ..|..++.. +.+++.+++.++++|
T Consensus 369 ~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~~~--d~~~la~ai~~ll~~ 442 (475)
T cd03813 369 PKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVPPA--DPEALARAILRLLKD 442 (475)
T ss_pred HhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEECCC--CHHHHHHHHHHHhcC
Confidence 789999865 3457899999999999985332 223334442 267777543 689999999999887
Q ss_pred C
Q psy16939 173 P 173 (174)
Q Consensus 173 ~ 173 (174)
+
T Consensus 443 ~ 443 (475)
T cd03813 443 P 443 (475)
T ss_pred H
Confidence 5
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.004 Score=48.48 Aligned_cols=125 Identities=10% Similarity=0.020 Sum_probs=79.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc---ccccC--CCCCEEEeecCCchh---hhcCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV---LNAKT--LPDNVFIQKWYPQTD---ILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~---~~~~~--~~~nv~~~~~~p~~~---~l~~~ 103 (174)
+...++..|.... ......+++++++.+.++++...+..... ..... ..+++.+.+++++.+ ++ .
T Consensus 170 ~~~~i~~~Gr~~~-----~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~--~ 242 (335)
T cd03802 170 KGDYLLFLGRISP-----EKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELL--G 242 (335)
T ss_pred CCCEEEEEEeecc-----ccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHH--H
Confidence 3456666777743 22345677777777778777655432211 00101 358999999998764 35 7
Q ss_pred CccEEEec-----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 104 NLRLFITH-----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 104 ~~~~~I~h-----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.+|+++.- +-..++.||+++|+|+|.-...+ ....+.+-..|..++. .+++.+++.+++.
T Consensus 243 ~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~~~----~~~l~~~l~~l~~ 307 (335)
T cd03802 243 NARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLVDS----VEELAAAVARADR 307 (335)
T ss_pred hCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEeCC----HHHHHHHHHHHhc
Confidence 78888853 22458999999999999876532 2233333346777652 8888888888754
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.018 Score=52.16 Aligned_cols=140 Identities=13% Similarity=0.124 Sum_probs=82.7
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-----CcEEEEecCC-CCcc---------------cc
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-----LPIFWKIDIT-NDPV---------------LN 80 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-----~~~i~~~~~~-~~~~---------------~~ 80 (174)
++..|+...+ ..+++..|.... ..-+..+++++..+. ..+.+..|.. ...+ +.
T Consensus 469 ~l~r~~~~pd-kpvIL~VGRL~p-----~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~ 542 (1050)
T TIGR02468 469 EIMRFFTNPR-KPMILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLID 542 (1050)
T ss_pred HHHhhcccCC-CcEEEEEcCCcc-----ccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHH
Confidence 3445554333 456677777753 333555566655442 1343334431 1100 01
Q ss_pred ccCCCCCEEEeecCCchhhhcC-CCc----cEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE
Q psy16939 81 AKTLPDNVFIQKWYPQTDILAH-PNL----RLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI 151 (174)
Q Consensus 81 ~~~~~~nv~~~~~~p~~~~l~~-~~~----~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~ 151 (174)
+..+.++|.+.+++++.++-.. ..| |+||.- |=..++.||+++|+|+|.-...+ ....++...-|+.
T Consensus 543 ~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlL 618 (1050)
T TIGR02468 543 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLL 618 (1050)
T ss_pred HhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEE
Confidence 1134578888888876653211 334 688875 33468999999999999975433 1223334456888
Q ss_pred ecCCCCCHHHHHHHHHHhhcCC
Q psy16939 152 EPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 152 l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++.. +.++|.++|.++++|+
T Consensus 619 VdP~--D~eaLA~AL~~LL~Dp 638 (1050)
T TIGR02468 619 VDPH--DQQAIADALLKLVADK 638 (1050)
T ss_pred ECCC--CHHHHHHHHHHHhhCH
Confidence 7654 6889999999999875
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=47.08 Aligned_cols=85 Identities=13% Similarity=0.118 Sum_probs=55.7
Q ss_pred CCCCCEEEeec---CCch---hhhcCCCccEEEec----CChhhHHHHHHcCCCeEeccc------cchH------HHHH
Q psy16939 83 TLPDNVFIQKW---YPQT---DILAHPNLRLFITH----GGISSLMEASSLGVPVLGVPF------FGDQ------YRNM 140 (174)
Q Consensus 83 ~~~~nv~~~~~---~p~~---~~l~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~------~~dQ------~~na 140 (174)
..++++.+.++ .+.. .++ ..+|+++.- |=..++.||+++|+|+|.--. .+++ ..+.
T Consensus 198 ~l~~~V~f~g~~G~~~~~dl~~~y--~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v 275 (335)
T PHA01633 198 EVPANVHFVAEFGHNSREYIFAFY--GAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKV 275 (335)
T ss_pred CCCCcEEEEecCCCCCHHHHHHHH--HhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCH
Confidence 45678888854 4443 344 779999974 335679999999999988522 1222 2222
Q ss_pred HHHH--HcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 141 VLLR--HRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 141 ~~l~--~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.... ..|.|..++ ..+++++.+++.+++.
T Consensus 276 ~~~~~~~~g~g~~~~--~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 276 EEYYDKEHGQKWKIH--KFQIEDMANAIILAFE 306 (335)
T ss_pred HHhcCcccCceeeec--CCCHHHHHHHHHHHHh
Confidence 2222 346777664 4589999999998843
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.039 Score=46.45 Aligned_cols=131 Identities=12% Similarity=0.137 Sum_probs=78.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh----hCC-CcEEEEecCCC---Ccc-ccccCCCCCEEEeecCCchhhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK----QLK-LPIFWKIDITN---DPV-LNAKTLPDNVFIQKWYPQTDILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~----~~~-~~~i~~~~~~~---~~~-~~~~~~~~nv~~~~~~p~~~~l~~ 102 (174)
++.++++.|.... ...+..+++++. ..+ .++++...+.. +.+ ..+..+.+++.+.++.+...++
T Consensus 318 ~~~~il~vGrl~~-----~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~-- 390 (500)
T TIGR02918 318 KPFSIITASRLAK-----EKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHRNLSEVY-- 390 (500)
T ss_pred CCeEEEEEecccc-----ccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCCCHHHHH--
Confidence 4567778888754 222444444443 333 24444333322 111 1111345789999988877888
Q ss_pred CCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCC--CCC----HHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ--TLT----KQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~--~~~----~~~l~~al~~ll~~ 172 (174)
..+|++|.-. -..++.||+++|+|+|.-...+ -+...++.-.-|..+... ..+ .+.+.+++.+++++
T Consensus 391 ~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~ 467 (500)
T TIGR02918 391 KDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNS 467 (500)
T ss_pred HhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhCh
Confidence 6799998643 3578999999999999964321 123344444567777522 112 67888899888843
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.02 Score=47.50 Aligned_cols=129 Identities=12% Similarity=0.002 Sum_probs=76.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-CCc----cccccCCCCCEEEeecCCchh---hhcCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-NDP----VLNAKTLPDNVFIQKWYPQTD---ILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~~~----~~~~~~~~~nv~~~~~~p~~~---~l~~~ 103 (174)
...+++..|...... ..+.+-+.+..+.+.+.++++...+. ... .+.. ..+.++.+....+... ++ .
T Consensus 290 ~~~~i~~vGrl~~~K--g~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~-~~~~~v~~~~~~~~~~~~~~~--~ 364 (473)
T TIGR02095 290 DVPLFGVISRLTQQK--GVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAE-RYPGNVRVIIGYDEALAHLIY--A 364 (473)
T ss_pred CCCEEEEEecCcccc--ChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHH-HCCCcEEEEEcCCHHHHHHHH--H
Confidence 356777778776421 23333333344433456777765442 111 1111 3456777766665543 44 7
Q ss_pred CccEEEecC---C-hhhHHHHHHcCCCeEeccccchHHHHHHHHHH------cCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 104 NLRLFITHG---G-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH------RGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 104 ~~~~~I~hg---G-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~------~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.+|+++.-. | ..+.+||+++|+|.|+-...+ ....+.+ .+.|..++.. +.+++.+++.+++.
T Consensus 365 ~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~~--d~~~la~~i~~~l~ 436 (473)
T TIGR02095 365 GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEEY--DPGALLAALSRALR 436 (473)
T ss_pred hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCCC--CHHHHHHHHHHHHH
Confidence 899999653 2 347899999999998764322 1112222 2678887543 67889999888775
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.022 Score=47.96 Aligned_cols=116 Identities=18% Similarity=0.242 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-------cccccc--CCCCCEEEeecCCchhhhc-
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-------PVLNAK--TLPDNVFIQKWYPQTDILA- 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-------~~~~~~--~~~~nv~~~~~~p~~~~l~- 101 (174)
.-+||+|++.... ..++.+..=++.|+..|..++|..++..- +...++ -..+++++.+-.|..+.++
T Consensus 429 ~avVf~c~~n~~K---~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~ 505 (620)
T COG3914 429 DAVVFCCFNNYFK---ITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRAR 505 (620)
T ss_pred CeEEEEecCCccc---CCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHh
Confidence 5689999988876 67899999999999999999998776321 111111 2356788888877665433
Q ss_pred CCCccEEEe---cCChhhHHHHHHcCCCeEeccccchHHH--HHHHH-HHcCceeEe
Q psy16939 102 HPNLRLFIT---HGGISSLMEASSLGVPVLGVPFFGDQYR--NMVLL-RHRGYALIE 152 (174)
Q Consensus 102 ~~~~~~~I~---hgG~~t~~eal~~g~P~i~vP~~~dQ~~--na~~l-~~~G~g~~l 152 (174)
+.-+|+|.. -||.+|..|+|-.|+|++..+ ++||. |+..+ ..+|+-..+
T Consensus 506 ~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 506 YGIADLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred hchhheeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 377999987 599999999999999999886 66664 33333 345655444
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.15 Score=40.26 Aligned_cols=123 Identities=20% Similarity=0.153 Sum_probs=72.1
Q ss_pred cCCCCeEEEEcCCCcCCCCCCHHHHH----HHHHHHhhCCCcEEEEecCCCCccc---cccCC--CCCEEEeec---CCc
Q psy16939 29 AAKGGFVYMSFGSVVDPTKLSEETKL----GFLEVFKQLKLPIFWKIDITNDPVL---NAKTL--PDNVFIQKW---YPQ 96 (174)
Q Consensus 29 ~~~~~~v~vs~Gs~~~~~~~~~~~~~----~i~~~l~~~~~~~i~~~~~~~~~~~---~~~~~--~~nv~~~~~---~p~ 96 (174)
..+++.+.|-.|+......+..+... .+.+.++..+.++.+.......+++ ..... ...+.+.+- -|+
T Consensus 143 ~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy 222 (311)
T PF06258_consen 143 ALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPY 222 (311)
T ss_pred cCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcH
Confidence 33478888888877666667776444 4444444445455555543322211 01012 344433332 467
Q ss_pred hhhhcCCCccEEE-ecCChhhHHHHHHcCCCeEeccccchHH---HHHHHHHHcCceeEec
Q psy16939 97 TDILAHPNLRLFI-THGGISSLMEASSLGVPVLGVPFFGDQY---RNMVLLRHRGYALIEP 153 (174)
Q Consensus 97 ~~~l~~~~~~~~I-~hgG~~t~~eal~~g~P~i~vP~~~dQ~---~na~~l~~~G~g~~l~ 153 (174)
...| ..||.++ |--..+.++||+..|+|+.++|...... .-...+++.|.-..++
T Consensus 223 ~~~L--a~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~ 281 (311)
T PF06258_consen 223 LGFL--AAADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFT 281 (311)
T ss_pred HHHH--HhCCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECC
Confidence 7788 4566655 5555788999999999999998765111 1334556667776654
|
The function of this family is unknown. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.04 Score=46.19 Aligned_cols=130 Identities=15% Similarity=0.064 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-----CccccccCCCCCEEEeecCCch---hhhcCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-----DPVLNAKTLPDNVFIQKWYPQT---DILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~nv~~~~~~p~~---~~l~~~ 103 (174)
+.+++...|...... ..+.+-+.+..+...+.++++...+.. +.++.+ ..++++.+..+++.. .++ +
T Consensus 306 ~~~~i~~vgRl~~~K--G~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~-~~~~~V~~~g~~~~~~~~~~~--a 380 (489)
T PRK14098 306 ETPLVGVIINFDDFQ--GAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAE-EHPEQVSVQTEFTDAFFHLAI--A 380 (489)
T ss_pred CCCEEEEeccccccC--cHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHH-HCCCCEEEEEecCHHHHHHHH--H
Confidence 345777777765421 333333333334334567776654432 111111 346789998888764 355 7
Q ss_pred CccEEEecCC----hhhHHHHHHcCCCeEeccccc--hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhh
Q psy16939 104 NLRLFITHGG----ISSLMEASSLGVPVLGVPFFG--DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 104 ~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~--dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
.+|+++...= ..+.+||+++|+|.|+....+ |...+ ..++.+.|..++.. +.+++.+++.+++
T Consensus 381 ~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~~~--d~~~la~ai~~~l 449 (489)
T PRK14098 381 GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFHDY--TPEALVAKLGEAL 449 (489)
T ss_pred hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeEeCCC--CHHHHHHHHHHHH
Confidence 8999997542 247889999999888764322 21110 01123677777543 6788888888754
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.035 Score=44.02 Aligned_cols=79 Identities=10% Similarity=0.180 Sum_probs=54.3
Q ss_pred CCCCCEEEeecCCchhhhcC-CC-ccEEEecC-------C------hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcC
Q psy16939 83 TLPDNVFIQKWYPQTDILAH-PN-LRLFITHG-------G------ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRG 147 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~-~~-~~~~I~hg-------G------~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G 147 (174)
...+|+.+.+|++..++..+ .+ ..++.... . .+-+.+.+++|+|+|+.+ +...+..+++.+
T Consensus 204 ~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~~ 279 (333)
T PRK09814 204 ENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVENG 279 (333)
T ss_pred ccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhCC
Confidence 34579999999998876432 22 11221111 1 123778899999999854 456778899999
Q ss_pred ceeEecCCCCCHHHHHHHHHHh
Q psy16939 148 YALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 148 ~g~~l~~~~~~~~~l~~al~~l 169 (174)
+|+.++ +.+++.+++.++
T Consensus 280 ~G~~v~----~~~el~~~l~~~ 297 (333)
T PRK09814 280 LGFVVD----SLEELPEIIDNI 297 (333)
T ss_pred ceEEeC----CHHHHHHHHHhc
Confidence 999996 456777777764
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.061 Score=44.69 Aligned_cols=132 Identities=11% Similarity=0.031 Sum_probs=71.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-C----ccccccCCCCCEEE-eecCCch---hhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-D----PVLNAKTLPDNVFI-QKWYPQT---DILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~----~~~~~~~~~~nv~~-~~~~p~~---~~l~~ 102 (174)
...+++..|...... ..+.+-+.+..+...+.++++..++.. . .++.+ ..+.++.+ .+| +.. .++
T Consensus 281 ~~~~i~~vGRl~~~K--G~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~g~-~~~~~~~~~-- 354 (466)
T PRK00654 281 DAPLFAMVSRLTEQK--GLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAA-RYPGKVGVQIGY-DEALAHRIY-- 354 (466)
T ss_pred CCcEEEEeecccccc--ChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHH-HCCCcEEEEEeC-CHHHHHHHH--
Confidence 356777778775421 222222222223233567777654421 1 11111 34556554 445 322 344
Q ss_pred CCccEEEecC---C-hhhHHHHHHcCCCeEeccccc--hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 103 PNLRLFITHG---G-ISSLMEASSLGVPVLGVPFFG--DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 103 ~~~~~~I~hg---G-~~t~~eal~~g~P~i~vP~~~--dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..+|+++.-. | ..+.+||+++|+|.|+-...+ |...+...-.+.+.|..++.. +.+++.+++.++++
T Consensus 355 ~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~--d~~~la~~i~~~l~ 427 (466)
T PRK00654 355 AGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDF--NAEDLLRALRRALE 427 (466)
T ss_pred hhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCC--CHHHHHHHHHHHHH
Confidence 7899999752 2 348999999999998864321 211110000223678887643 67888888888764
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.061 Score=44.11 Aligned_cols=134 Identities=13% Similarity=0.075 Sum_probs=77.8
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC------CcEEEEecCCCC------ccc----cccCCCCCEEEeecCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK------LPIFWKIDITND------PVL----NAKTLPDNVFIQKWYP 95 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~------~~~i~~~~~~~~------~~~----~~~~~~~nv~~~~~~p 95 (174)
+..++++.|...... .....++.+.......+ .++++..++... .++ .+..+.+++.+.+++|
T Consensus 236 ~~~~il~vgr~~~~K-~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~ 314 (419)
T cd03806 236 RENQILSIAQFRPEK-NHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAP 314 (419)
T ss_pred CCcEEEEEEeecCCC-CHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCC
Confidence 456788888775422 12333444433333322 355554433210 111 0113467899999988
Q ss_pred chhhhcC-CCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHH---HcCceeEecCCCCCHHHHHHHHH
Q psy16939 96 QTDILAH-PNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLR---HRGYALIEPIQTLTKQSFLKNAQ 167 (174)
Q Consensus 96 ~~~~l~~-~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~---~~G~g~~l~~~~~~~~~l~~al~ 167 (174)
+.++..+ ..||++|+.. =..++.||+++|+|.|+.-..+.- ...+. .-..|.... +.+++.+++.
T Consensus 315 ~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g~~G~l~~----d~~~la~ai~ 387 (419)
T cd03806 315 FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGGPTGFLAS----TAEEYAEAIE 387 (419)
T ss_pred HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCCCCceEEeC----CHHHHHHHHH
Confidence 7653322 7799988532 235789999999999986432211 11122 334676652 7899999999
Q ss_pred HhhcCC
Q psy16939 168 TMLNDP 173 (174)
Q Consensus 168 ~ll~~~ 173 (174)
++++++
T Consensus 388 ~ll~~~ 393 (419)
T cd03806 388 KILSLS 393 (419)
T ss_pred HHHhCC
Confidence 999864
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.047 Score=45.44 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=71.0
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhh----CC-CcEEEEecCCCCccccc--cCCCCCE-EEeecCCchhhhcCCCc
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQ----LK-LPIFWKIDITNDPVLNA--KTLPDNV-FIQKWYPQTDILAHPNL 105 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~~-~~~i~~~~~~~~~~~~~--~~~~~nv-~~~~~~p~~~~l~~~~~ 105 (174)
.+++..|-.... ..+..++++++. .+ .++++...+....++.+ +..+-+. .+.++.+..+++ ..+
T Consensus 229 ~~~l~vGRL~~e-----K~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~~~~~~~--~~~ 301 (462)
T PLN02846 229 KGAYYIGKMVWS-----KGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRDHADPLF--HDY 301 (462)
T ss_pred eEEEEEecCccc-----CCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCCCHHHHH--HhC
Confidence 356677777642 234445555443 22 34555444433222111 0122122 344555555677 678
Q ss_pred cEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 106 RLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 106 ~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|+||.- +=..++.||+++|+|+|..-... + ..+.+-+-|...+ +.+++.+++.+++++
T Consensus 302 DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~~----~~~~~a~ai~~~l~~ 363 (462)
T PLN02846 302 KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTYD----DGKGFVRATLKALAE 363 (462)
T ss_pred CEEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEecC----CHHHHHHHHHHHHcc
Confidence 999987 44678999999999999985433 1 3333344444442 577888888888764
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.04 Score=45.63 Aligned_cols=134 Identities=14% Similarity=0.038 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Ccc-cc--ccCCCCCEEEeecCCchh---hhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPV-LN--AKTLPDNVFIQKWYPQTD---ILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~-~~--~~~~~~nv~~~~~~p~~~---~l~~~~ 104 (174)
...+++..|..... ...+.+-+.++.+.+.+.++++...+.. ..+ +. ....++++.+....+... ++ ..
T Consensus 295 ~~~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~ 370 (476)
T cd03791 295 DAPLFGFVGRLTEQ--KGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIY--AG 370 (476)
T ss_pred CCCEEEEEeecccc--ccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH--Hh
Confidence 45677777877642 1333344444444444567766654422 111 10 012356777655444332 34 77
Q ss_pred ccEEEec----CChhhHHHHHHcCCCeEeccccc--hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 105 LRLFITH----GGISSLMEASSLGVPVLGVPFFG--DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 105 ~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~--dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|+++.. +-..+.+||+++|+|.|+-...+ |...+...-.+.|.|..++.. +.+++.+++.++++
T Consensus 371 aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~--~~~~l~~~i~~~l~ 441 (476)
T cd03791 371 ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALA 441 (476)
T ss_pred CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC--CHHHHHHHHHHHHH
Confidence 9999964 22357899999999998764321 211111101134578888643 57889999988764
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.091 Score=41.25 Aligned_cols=138 Identities=11% Similarity=0.045 Sum_probs=83.7
Q ss_pred HHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-C---CccccccCCCCCEEEeecCC---
Q psy16939 24 QQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-N---DPVLNAKTLPDNVFIQKWYP--- 95 (174)
Q Consensus 24 ~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~---~~~~~~~~~~~nv~~~~~~p--- 95 (174)
.+++.... ++.|++..|+......++.+.+.++++.+...++++++..++. + ..++.. ..+. ..+.+-.+
T Consensus 170 ~~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~-~~~~-~~l~g~~sL~e 247 (319)
T TIGR02193 170 VAFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAE-ALPG-AVVLPKMSLAE 247 (319)
T ss_pred hhhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHh-hCCC-CeecCCCCHHH
Confidence 34554432 6788888887666566899999999999987677777664542 2 111211 1222 22333323
Q ss_pred chhhhcCCCccEEEecCChhhHHHHHHcCCCeEec--cccchHHHHHHHHHHcCceeEe--cCCCCCHHHHHHHHHHhh
Q psy16939 96 QTDILAHPNLRLFITHGGISSLMEASSLGVPVLGV--PFFGDQYRNMVLLRHRGYALIE--PIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 96 ~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~~na~~l~~~G~g~~l--~~~~~~~~~l~~al~~ll 170 (174)
...++ ..|+++|+.-. |.++=|.+.|+|.+.+ |....++. -+ .....+.. .-+..+++++.++++++|
T Consensus 248 l~ali--~~a~l~I~~DS-gp~HlAaa~g~P~i~lfg~t~p~~~~--P~--~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 248 VAALL--AGADAVVGVDT-GLTHLAAALDKPTVTLYGATDPGRTG--GY--GKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHHH--HcCCEEEeCCC-hHHHHHHHcCCCEEEEECCCCHhhcc--cC--CCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 23355 77999999876 5788888999999987 43322210 00 00001111 135679999999998875
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.21 Score=42.55 Aligned_cols=116 Identities=13% Similarity=-0.016 Sum_probs=67.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCccc----cccCCCCCEEEeecCCch-hhhcCCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQT-DILAHPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~~-~~l~~~~~~ 106 (174)
..++.+.|-..... .....++.+...+...+ .++++...+...+++ .+..+.+++.+.++..+. .++ ..+|
T Consensus 398 ~~vIg~VgRl~~~K-g~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~L--aaAD 474 (578)
T PRK15490 398 DTTIGGVFRFVGDK-NPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWL--QKMN 474 (578)
T ss_pred CcEEEEEEEEehhc-CHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHH--HhCC
Confidence 34555666544321 23445555555555444 366665544322211 111356889999986543 345 7899
Q ss_pred EEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCC
Q psy16939 107 LFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQ 155 (174)
Q Consensus 107 ~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~ 155 (174)
++|.. |-.+++.||+++|+|+|.-... .+...+.+-..|..++..
T Consensus 475 VfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LVp~~ 523 (578)
T PRK15490 475 VFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFILDDA 523 (578)
T ss_pred EEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEECCC
Confidence 99964 3367999999999999976532 233444455566666543
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.12 Score=41.79 Aligned_cols=135 Identities=21% Similarity=0.168 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC----C-CcEEEEecCCCCcc----ccccCCCCCEEEeec-CCchhhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL----K-LPIFWKIDITNDPV----LNAKTLPDNVFIQKW-YPQTDILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~----~-~~~i~~~~~~~~~~----~~~~~~~~nv~~~~~-~p~~~~l~ 101 (174)
+++|.+--||.... -...+..++++.+.. + .+|++...+....+ ... ....++.+... -...+++
T Consensus 184 ~~iIaLLPGSR~~E---I~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~m- 258 (373)
T PF02684_consen 184 KPIIALLPGSRKSE---IKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILA-EYPPDVSIVIIEGESYDAM- 258 (373)
T ss_pred CcEEEEeCCCCHHH---HHHHHHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHH-hhCCCCeEEEcCCchHHHH-
Confidence 68999999998641 123334444443332 2 36776655433221 111 12223333222 2445566
Q ss_pred CCCccEEEecCChhhHHHHHHcCCCeEec-cccchHHHHHHHHHHcCc-ee--E---------ecCCCCCHHHHHHHHHH
Q psy16939 102 HPNLRLFITHGGISSLMEASSLGVPVLGV-PFFGDQYRNMVLLRHRGY-AL--I---------EPIQTLTKQSFLKNAQT 168 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~eal~~g~P~i~v-P~~~dQ~~na~~l~~~G~-g~--~---------l~~~~~~~~~l~~al~~ 168 (174)
..||+++.-.|. .+.|+...|+||+++ -...=-+.-|+++.+... |+ . +-.++.+++.+.+++.+
T Consensus 259 -~~ad~al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ 336 (373)
T PF02684_consen 259 -AAADAALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLE 336 (373)
T ss_pred -HhCcchhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHH
Confidence 679999999985 788999999999998 333334556677765322 11 1 11346799999999999
Q ss_pred hhcCC
Q psy16939 169 MLNDP 173 (174)
Q Consensus 169 ll~~~ 173 (174)
++.|+
T Consensus 337 ll~~~ 341 (373)
T PF02684_consen 337 LLENP 341 (373)
T ss_pred HhcCH
Confidence 99875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.053 Score=47.26 Aligned_cols=76 Identities=20% Similarity=0.237 Sum_probs=52.3
Q ss_pred CEEEeecCCchh-hhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHH
Q psy16939 87 NVFIQKWYPQTD-ILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQS 161 (174)
Q Consensus 87 nv~~~~~~p~~~-~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~ 161 (174)
++.+.++.++.. ++ ..+|+||.-. =..++.||+++|+|+|.-...+... +..-+.|. +. -+.++
T Consensus 602 ~V~FLG~~dd~~~ly--asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g~nGl-l~---~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSL--HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSFPNCL-TY---KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHH--HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----EeecCCeE-ec---CCHHH
Confidence 466677766554 66 7899998743 3578999999999999986544321 22222232 22 26899
Q ss_pred HHHHHHHhhcCC
Q psy16939 162 FLKNAQTMLNDP 173 (174)
Q Consensus 162 l~~al~~ll~~~ 173 (174)
+.+++.++++++
T Consensus 671 fAeAI~~LLsd~ 682 (794)
T PLN02501 671 FVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHhCc
Confidence 999999999875
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.67 Score=35.79 Aligned_cols=138 Identities=15% Similarity=0.129 Sum_probs=78.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHH----HHHHHHhhCCCcEEEEecCCCCcc---ccccCCC--CCE----EEeecCCchh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKL----GFLEVFKQLKLPIFWKIDITNDPV---LNAKTLP--DNV----FIQKWYPQTD 98 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~----~i~~~l~~~~~~~i~~~~~~~~~~---~~~~~~~--~nv----~~~~~~p~~~ 98 (174)
+++|-|-.|+........++... .+.+.+++.+.+|++.......+. .....+. ..+ .=.++-|+-+
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~ 240 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYID 240 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHH
Confidence 67776666666554445444443 444566667778888776533221 0000111 111 1123558888
Q ss_pred hhcCCCccEEEecCC-hhhHHHHHHcCCCeEec--cccc--hHHHHHHHHHHcCceeEecC----------CCC-CHHHH
Q psy16939 99 ILAHPNLRLFITHGG-ISSLMEASSLGVPVLGV--PFFG--DQYRNMVLLRHRGYALIEPI----------QTL-TKQSF 162 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG-~~t~~eal~~g~P~i~v--P~~~--dQ~~na~~l~~~G~g~~l~~----------~~~-~~~~l 162 (174)
.| ++||.+|.-.. .+.++||++.|+|+.+. |.+. --...-+.+++.+++...+. +-+ ..+++
T Consensus 241 ~L--a~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~~~e~ysy~PLnEt~Ri 318 (329)
T COG3660 241 ML--AAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNLALEEYSYKPLNETERI 318 (329)
T ss_pred HH--hhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchhhhcccccCCchHHHHH
Confidence 88 77998877665 67789999999999877 3331 12223344555555544332 112 24667
Q ss_pred HHHHHHhhc
Q psy16939 163 LKNAQTMLN 171 (174)
Q Consensus 163 ~~al~~ll~ 171 (174)
.+.++..+.
T Consensus 319 A~~Ira~l~ 327 (329)
T COG3660 319 AEEIRAELG 327 (329)
T ss_pred HHHHHHHhC
Confidence 777776554
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.084 Score=38.20 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=39.4
Q ss_pred CCCCCEEEeecCCchhhh-cC-CCccEEEecCC----hhhHHHHHHcCCCeEeccccc
Q psy16939 83 TLPDNVFIQKWYPQTDIL-AH-PNLRLFITHGG----ISSLMEASSLGVPVLGVPFFG 134 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l-~~-~~~~~~I~hgG----~~t~~eal~~g~P~i~vP~~~ 134 (174)
....|+.+.++++..+.+ .. ..||++++... .+++.||+++|+|+|+-+..+
T Consensus 158 ~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 158 LLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 456799999997332221 11 45999999887 789999999999999986543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.026 Score=47.04 Aligned_cols=82 Identities=13% Similarity=0.052 Sum_probs=52.9
Q ss_pred CCCCCEEEeecCCchhhhcC-CCccEEEec---CC-hhhHHHHHHcCCCeEeccccc---hHHHHHHHHHHcC-ceeEec
Q psy16939 83 TLPDNVFIQKWYPQTDILAH-PNLRLFITH---GG-ISSLMEASSLGVPVLGVPFFG---DQYRNMVLLRHRG-YALIEP 153 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~-~~~~~~I~h---gG-~~t~~eal~~g~P~i~vP~~~---dQ~~na~~l~~~G-~g~~l~ 153 (174)
.+.+++.+.+++++.++... .+|+++++- -| ..++.||+++|+|+|.....+ |..... ..| .|...+
T Consensus 332 ~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~----~~g~tG~l~~ 407 (463)
T PLN02949 332 GLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE----DGQQTGFLAT 407 (463)
T ss_pred CCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC----CCCcccccCC
Confidence 35688999999986653221 678998842 22 347999999999999985432 111100 002 243331
Q ss_pred CCCCCHHHHHHHHHHhhcC
Q psy16939 154 IQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 154 ~~~~~~~~l~~al~~ll~~ 172 (174)
+.+++.+++.+++++
T Consensus 408 ----~~~~la~ai~~ll~~ 422 (463)
T PLN02949 408 ----TVEEYADAILEVLRM 422 (463)
T ss_pred ----CHHHHHHHHHHHHhC
Confidence 688899999988874
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.16 Score=43.60 Aligned_cols=135 Identities=8% Similarity=-0.052 Sum_probs=77.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh--hC--CCcEEEEecCCCCcc-cccc--CCC-CCEEEeecCCchhhhcCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK--QL--KLPIFWKIDITNDPV-LNAK--TLP-DNVFIQKWYPQTDILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~--~~--~~~~i~~~~~~~~~~-~~~~--~~~-~nv~~~~~~p~~~~l~~~ 103 (174)
+++|.+--||.... -...+..++++.+ .. +.+|++........+ +.+. ..+ ..+.+..--...+++ .
T Consensus 413 ~~iIaLLPGSR~~E---I~rllPv~l~aa~~~~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m--~ 487 (608)
T PRK01021 413 KPIVAAFPGSRRGD---ILRNLTIQVQAFLASSLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPSQFRYELM--R 487 (608)
T ss_pred CCEEEEECCCCHHH---HHHHHHHHHHHHHHHHhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecCcchHHHH--H
Confidence 68899999998651 2445666666665 33 346666443322111 1110 111 122322211124667 6
Q ss_pred CccEEEecCChhhHHHHHHcCCCeEecc-ccchHHHHHHHHHHc------------CceeE---ec-CCCCCHHHHHHHH
Q psy16939 104 NLRLFITHGGISSLMEASSLGVPVLGVP-FFGDQYRNMVLLRHR------------GYALI---EP-IQTLTKQSFLKNA 166 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~eal~~g~P~i~vP-~~~dQ~~na~~l~~~------------G~g~~---l~-~~~~~~~~l~~al 166 (174)
.||+.+.-.|. .+.|+...|+||+++= ...=-..-++++.+. |-.++ +. .++.+++++.+++
T Consensus 488 aaD~aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l 566 (608)
T PRK01021 488 ECDCALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL 566 (608)
T ss_pred hcCeeeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH
Confidence 79999999995 7889999999999982 222223445666551 11111 21 3567899999986
Q ss_pred HHhhcCC
Q psy16939 167 QTMLNDP 173 (174)
Q Consensus 167 ~~ll~~~ 173 (174)
+++.|+
T Consensus 567 -~lL~d~ 572 (608)
T PRK01021 567 -DILKTS 572 (608)
T ss_pred -HHhcCH
Confidence 766654
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.26 Score=40.34 Aligned_cols=97 Identities=15% Similarity=0.121 Sum_probs=58.1
Q ss_pred HHHHHHHHhhCCCcE-EEEecCCCCccccccCCCCCEEEeecCCc----hhhhcCCCccEEEec----CChhhHHHHHHc
Q psy16939 53 KLGFLEVFKQLKLPI-FWKIDITNDPVLNAKTLPDNVFIQKWYPQ----TDILAHPNLRLFITH----GGISSLMEASSL 123 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~nv~~~~~~p~----~~~l~~~~~~~~I~h----gG~~t~~eal~~ 123 (174)
...+++++...+..+ ++..|... + ....++...++... ..++ ..+|++|.- |-..++.||+++
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~-~-----~~~~~v~~~g~~~~~~~l~~~y--~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFS-P-----FTAGNVVNHGFETDKRKLMSAL--NQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCC-c-----ccccceEEecCcCCHHHHHHHH--HhCCEEEECCccccCcCHHHHHHHc
Confidence 466778877765432 33344322 1 22346776776533 2334 679999874 345789999999
Q ss_pred CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHH
Q psy16939 124 GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLK 164 (174)
Q Consensus 124 g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 164 (174)
|+|+|.-...+= ...+. .+.|..++.. +.++|.+
T Consensus 330 G~PVVat~~gG~----~Eiv~-~~~G~lv~~~--d~~~La~ 363 (405)
T PRK10125 330 GVPVIATHSDAA----REVLQ-KSGGKTVSEE--EVLQLAQ 363 (405)
T ss_pred CCCEEEeCCCCh----HHhEe-CCcEEEECCC--CHHHHHh
Confidence 999999876541 12222 2467777654 3444444
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.075 Score=40.95 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=63.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc---ccccCC-CCC-EEEeecCC---chhhhcCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV---LNAKTL-PDN-VFIQKWYP---QTDILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~---~~~~~~-~~n-v~~~~~~p---~~~~l~~~ 103 (174)
++.|++..|+......++.+.+.++++.+...++++++..++++... +.+ .. ..+ +.+.+..+ ...++ .
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~-~~~~~~~~~~~~~~~l~e~~~li--~ 197 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERELAEEIAA-ALGGPRVVNLAGKTSLRELAALL--A 197 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHHHHHHHHH-hcCCCccccCcCCCCHHHHHHHH--H
Confidence 57888888887665568899999999999887788887665543221 111 11 112 22222222 23345 6
Q ss_pred CccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 104 NLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
.+|++|+.-. |+++=|.+.|+|++.+
T Consensus 198 ~~~l~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 198 RADLVVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred hCCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 7999999965 5777778999999988
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.62 Score=37.07 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=44.7
Q ss_pred cCCchh---hhcCCCccEEEec----CChhhHHHHHHcCCCeEeccccc--hHHHHH---HHHH-----------HcCce
Q psy16939 93 WYPQTD---ILAHPNLRLFITH----GGISSLMEASSLGVPVLGVPFFG--DQYRNM---VLLR-----------HRGYA 149 (174)
Q Consensus 93 ~~p~~~---~l~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~--dQ~~na---~~l~-----------~~G~g 149 (174)
+++..+ ++ ..+|+++.- |-..++.||+++|+|+|.-...+ |...+. ..+. -.++|
T Consensus 197 ~v~~~~l~~~y--~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G 274 (331)
T PHA01630 197 PLPDDDIYSLF--AGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVG 274 (331)
T ss_pred cCCHHHHHHHH--HhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccc
Confidence 366544 34 789999842 22568999999999999975432 322211 1010 02345
Q ss_pred eEecCCCCCHHHHHHHHHHhhcC
Q psy16939 150 LIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 150 ~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+.. +.+++.+++.+++.+
T Consensus 275 ~~v~~---~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 275 YFLDP---DIEDAYQKLLEALAN 294 (331)
T ss_pred cccCC---CHHHHHHHHHHHHhC
Confidence 55543 457777777777765
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.29 Score=38.69 Aligned_cols=95 Identities=12% Similarity=0.180 Sum_probs=64.0
Q ss_pred CCeEEEEcCCCc-CCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cccccCCCCCEE-EeecCC---chhhhcCC
Q psy16939 32 GGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VLNAKTLPDNVF-IQKWYP---QTDILAHP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~~nv~-~~~~~p---~~~~l~~~ 103 (174)
++.|.+..|+.. ....++.+.+.++++.+...+.++++..++++.+ ++.+ ..+.++. +.+-.+ ...++ .
T Consensus 174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~-~~~~~~~~l~g~~sL~el~ali--~ 250 (334)
T TIGR02195 174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEA-LLPGELRNLAGETSLDEAVDLI--A 250 (334)
T ss_pred CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHH-hCCcccccCCCCCCHHHHHHHH--H
Confidence 688999998853 4456899999999999877677877766554422 1211 1222222 223222 23355 7
Q ss_pred CccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 104 NLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
.||++|+.-. |.++=|.+.|+|+|.+
T Consensus 251 ~a~l~I~~DS-Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 251 LAKAVVTNDS-GLMHVAAALNRPLVAL 276 (334)
T ss_pred hCCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 7999999876 5788888999999987
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.63 Score=36.96 Aligned_cols=95 Identities=9% Similarity=0.102 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC--CC---ccccccCCC-CC-EEEeecCC---chhhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT--ND---PVLNAKTLP-DN-VFIQKWYP---QTDILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~--~~---~~~~~~~~~-~n-v~~~~~~p---~~~~l~ 101 (174)
++.|.+..|+......++.+.+.++++.+...++++++..++. +. .++.+ ..+ .+ +-+.+-.+ ...++
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~-~~~~~~~~~l~g~~sL~el~ali- 258 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQ-GCQTPRVTSLAGKLTLPQLAALI- 258 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHh-hCCCCcccccCCCCCHHHHHHHH-
Confidence 5788888888765556889999999999987778877766543 11 11111 111 12 22233222 23345
Q ss_pred CCCccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 102 HPNLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
..|+++|+.- .|.++=|.+.|+|.|.+
T Consensus 259 -~~a~l~Vs~D-SGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 259 -DHARLFIGVD-SVPMHMAAALGTPLVAL 285 (344)
T ss_pred -HhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 7799999994 57899999999999988
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.48 Score=37.83 Aligned_cols=138 Identities=8% Similarity=0.070 Sum_probs=83.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-----ccccc-CCCCCEEEeecCC---chhhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-----VLNAK-TLPDNVFIQKWYP---QTDILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-----~~~~~-~~~~nv~~~~~~p---~~~~l~~ 102 (174)
++.|.+..|+......++.+.+.++++.|.+.++++++..++.+.+ ++.+. ..+..+-+.+-.+ ...++
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali-- 260 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALI-- 260 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHH--
Confidence 5788899998766566899999999999987788888776643211 11110 0112222333333 23345
Q ss_pred CCccEEEecCChhhHHHHHHcCCCeEec--cccchHH----HHHHHHHH--cCceeE---ec-----CCCCCHHHHHHHH
Q psy16939 103 PNLRLFITHGGISSLMEASSLGVPVLGV--PFFGDQY----RNMVLLRH--RGYALI---EP-----IQTLTKQSFLKNA 166 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~----~na~~l~~--~G~g~~---l~-----~~~~~~~~l~~al 166 (174)
..|+++|+.-. |-++=|.+.|+|.|.+ |....++ .++..+.. ...+-. .. -++.+++++.+++
T Consensus 261 ~~a~l~v~nDS-Gp~HlAaA~g~P~v~lfGpt~p~~~~P~~~~~~v~~~~~~~~~pc~~~~~~~~~Cm~~I~~~~V~~~~ 339 (352)
T PRK10422 261 DHAQLFIGVDS-APAHIAAAVNTPLICLFGATDHIFWRPWSDNMIQFWAGDYQEMPTRDELDRNEKYLSVIPAADVIAAV 339 (352)
T ss_pred HhCCEEEecCC-HHHHHHHHcCCCEEEEECCCCccccCCCCCCeeEEECCCcccCcCcccCCccccHhhcCCHHHHHHHH
Confidence 67999999876 5788888999999988 5432111 01100100 000000 00 1247899999999
Q ss_pred HHhhcC
Q psy16939 167 QTMLND 172 (174)
Q Consensus 167 ~~ll~~ 172 (174)
++++.+
T Consensus 340 ~~ll~~ 345 (352)
T PRK10422 340 DKLLPS 345 (352)
T ss_pred HHHHhc
Confidence 998864
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=2.3 Score=35.19 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=85.0
Q ss_pred HHHHhcCC-CCeEEEEcCCCcCC-CCC--C----HHHHHHHHHHHhhCCCcEEEEecCC--------CCc---ccccc-C
Q psy16939 24 QQRADAAK-GGFVYMSFGSVVDP-TKL--S----EETKLGFLEVFKQLKLPIFWKIDIT--------NDP---VLNAK-T 83 (174)
Q Consensus 24 ~~~~~~~~-~~~v~vs~Gs~~~~-~~~--~----~~~~~~i~~~l~~~~~~~i~~~~~~--------~~~---~~~~~-~ 83 (174)
..|+...+ ++.|.|+....... ... . .+.+.++++.+.+.++++++..... +.. ++.+. .
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 35555433 67888887765411 000 1 2344555666656688777654321 100 01110 1
Q ss_pred CCCCEEE-ee-cCCch--hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeE-ecCCCCC
Q psy16939 84 LPDNVFI-QK-WYPQT--DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALI-EPIQTLT 158 (174)
Q Consensus 84 ~~~nv~~-~~-~~p~~--~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~-l~~~~~~ 158 (174)
.+.++++ .+ +-+.. .++ .+||++|..= ..++.-|+..|+|++.+++ | +-....++..|.... ++.++++
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iI--s~~dl~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~~~~l~ 378 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKIL--GACELTVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAIDIRHLL 378 (426)
T ss_pred cccceeEecCCCChHHHHHHH--hhCCEEEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEechhhCC
Confidence 1233333 22 33332 455 7799999753 4456777889999999987 2 444456688888765 6677888
Q ss_pred HHHHHHHHHHhhcC
Q psy16939 159 KQSFLKNAQTMLND 172 (174)
Q Consensus 159 ~~~l~~al~~ll~~ 172 (174)
.++|.+.+++++++
T Consensus 379 ~~~Li~~v~~~~~~ 392 (426)
T PRK10017 379 DGSLQAMVADTLGQ 392 (426)
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999998876
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.7 Score=38.81 Aligned_cols=131 Identities=7% Similarity=-0.062 Sum_probs=65.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-Cc----cccccCCCCCE-EEeecCCchhhhcCCCcc
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-DP----VLNAKTLPDNV-FIQKWYPQTDILAHPNLR 106 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~----~~~~~~~~~nv-~~~~~~p~~~~l~~~~~~ 106 (174)
.+++...|...... ..+.+-+.+..+.+.+.++++...+.. .. ++.+ ..+.++ .+.+|-....-+.+..+|
T Consensus 295 ~~li~~VgRL~~~K--G~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~-~~~~~v~~~~G~~~~l~~~~~a~aD 371 (485)
T PRK14099 295 ALLLGVISRLSWQK--GLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQ-AYPGQIGVVIGYDEALAHLIQAGAD 371 (485)
T ss_pred CcEEEEEecCCccc--cHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHH-HCCCCEEEEeCCCHHHHHHHHhcCC
Confidence 34555567665321 223333333333333567766654431 11 1111 234555 566663222222125699
Q ss_pred EEEec----CChhhHHHHHHcCCCeEeccccc--hHHHHHH-HHHH--cCceeEecCCCCCHHHHHHHHHH
Q psy16939 107 LFITH----GGISSLMEASSLGVPVLGVPFFG--DQYRNMV-LLRH--RGYALIEPIQTLTKQSFLKNAQT 168 (174)
Q Consensus 107 ~~I~h----gG~~t~~eal~~g~P~i~vP~~~--dQ~~na~-~l~~--~G~g~~l~~~~~~~~~l~~al~~ 168 (174)
+++.- |=..+.+||+++|+|.|+-...+ |-..... ..+. .+.|..++.. +.+++.+++.+
T Consensus 372 ifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~--d~~~La~ai~~ 440 (485)
T PRK14099 372 ALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV--TADALAAALRK 440 (485)
T ss_pred EEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC--CHHHHHHHHHH
Confidence 99963 22457789999997766643211 2111110 0111 1468877654 68889998886
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.57 Score=41.76 Aligned_cols=80 Identities=9% Similarity=0.001 Sum_probs=50.6
Q ss_pred CCCCEEEeecC----CchhhhcC--CCccEEEec---CC-hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEec
Q psy16939 84 LPDNVFIQKWY----PQTDILAH--PNLRLFITH---GG-ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 84 ~~~nv~~~~~~----p~~~~l~~--~~~~~~I~h---gG-~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~ 153 (174)
+.+++.+.++. +..+++.+ ..+|+|+.- -| ..++.||+++|+|+|.-...+ ....+++-..|..++
T Consensus 640 L~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV~ 715 (815)
T PLN00142 640 LKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHID 715 (815)
T ss_pred CCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeC
Confidence 45677776643 22344321 246888864 22 358999999999998865433 334555556788887
Q ss_pred CCCCCHHHHHHHHHHh
Q psy16939 154 IQTLTKQSFLKNAQTM 169 (174)
Q Consensus 154 ~~~~~~~~l~~al~~l 169 (174)
.. +.+++.++|.++
T Consensus 716 P~--D~eaLA~aI~~l 729 (815)
T PLN00142 716 PY--HGDEAANKIADF 729 (815)
T ss_pred CC--CHHHHHHHHHHH
Confidence 54 567777776654
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.24 Score=39.41 Aligned_cols=137 Identities=14% Similarity=0.195 Sum_probs=83.3
Q ss_pred CCeEEEEcC-CCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc---ccccCCCCCEEEeecCCc---hhhhcCCC
Q psy16939 32 GGFVYMSFG-SVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV---LNAKTLPDNVFIQKWYPQ---TDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~G-s~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~---~~~~~~~~nv~~~~~~p~---~~~l~~~~ 104 (174)
++.|+++.| |......++.+.+.++++.+.+.++++++..++++.+. +.. ..+..+.+.+-.+. ..++ ..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~-~~~~~~~l~~k~sL~e~~~li--~~ 251 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAK-GLPNAVILAGKTSLEELAALI--AG 251 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHH-hcCCccccCCCCCHHHHHHHH--hc
Confidence 589999999 55465668999999999999999977777666533221 111 22222224443332 2344 67
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEec--cccchH----HHHHH---------HHHHcCceeEecCCCCCHHHHHHHHHHh
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGV--PFFGDQ----YRNMV---------LLRHRGYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ----~~na~---------~l~~~G~g~~l~~~~~~~~~l~~al~~l 169 (174)
||++|+.-. |-++=|.+.|+|.|.+ |....+ ..+.. .....| +-.-..++.+.+.+.+++..+
T Consensus 252 a~l~I~~DS-g~~HlAaA~~~P~I~iyg~t~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~v~~~~~~~ 329 (334)
T COG0859 252 ADLVIGNDS-GPMHLAAALGTPTIALYGPTSPAFTPPPDPKLPGISGNLDCSPCKPSG-GHHECLKDIEPEKVLEAAEAL 329 (334)
T ss_pred CCEEEccCC-hHHHHHHHcCCCEEEEECCCCccccCCCCccceEeecccccccccccc-chhcccccCCHHHHHHHHHHH
Confidence 999998775 5788888999999998 332111 11111 111111 111112356788888888887
Q ss_pred hcCC
Q psy16939 170 LNDP 173 (174)
Q Consensus 170 l~~~ 173 (174)
+..+
T Consensus 330 ~~~~ 333 (334)
T COG0859 330 LATK 333 (334)
T ss_pred hhcc
Confidence 7654
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.21 Score=42.25 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=55.5
Q ss_pred CCEEEeecCCc---hhhhcCCCccEEEecC---ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCH
Q psy16939 86 DNVFIQKWYPQ---TDILAHPNLRLFITHG---GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTK 159 (174)
Q Consensus 86 ~nv~~~~~~p~---~~~l~~~~~~~~I~hg---G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~ 159 (174)
..+.+.++.+. ...+ ..+.++|.-+ |.++..||+.+|+|+| .......++...=|..+. +.
T Consensus 409 ~~v~f~gy~~e~dl~~~~--~~arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~----d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISAL--DKLRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID----DI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHH--hhheEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC----CH
Confidence 57778887663 3345 7799999866 6779999999999999 222345555556666663 68
Q ss_pred HHHHHHHHHhhcCC
Q psy16939 160 QSFLKNAQTMLNDP 173 (174)
Q Consensus 160 ~~l~~al~~ll~~~ 173 (174)
++|.+++..+|.++
T Consensus 476 ~~l~~al~~~L~~~ 489 (519)
T TIGR03713 476 SELLKALDYYLDNL 489 (519)
T ss_pred HHHHHHHHHHHhCH
Confidence 89999999988774
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.11 Score=39.05 Aligned_cols=95 Identities=13% Similarity=0.159 Sum_probs=58.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-cc----ccccCCC-CCEEEeecCCch---hhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND-PV----LNAKTLP-DNVFIQKWYPQT---DILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~-~~----~~~~~~~-~nv~~~~~~p~~---~~l~~ 102 (174)
++.|++..|+......++.+.+.++++.+.+.++++++..++.+. .+ +.. ..+ ..+.+.+-.+.. .++
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~e~~ali-- 181 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAA-GLQNPVINLAGKTSLRELAALI-- 181 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHT-THTTTTEEETTTS-HHHHHHHH--
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHH-hcccceEeecCCCCHHHHHHHH--
Confidence 688999998877656688999999999999888777776655441 11 111 112 134444433333 355
Q ss_pred CCccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 103 PNLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
..||++|+.-. |.++=|.+.|+|+|.+
T Consensus 182 ~~a~~~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 SRADLVIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HTSSEEEEESS-HHHHHHHHTT--EEEE
T ss_pred hcCCEEEecCC-hHHHHHHHHhCCEEEE
Confidence 67999999886 5788899999999998
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=93.62 E-value=1.7 Score=38.75 Aligned_cols=128 Identities=9% Similarity=0.095 Sum_probs=75.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCC------Cc------c----ccccCCCCCEEE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITN------DP------V----LNAKTLPDNVFI 90 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~------~~------~----~~~~~~~~nv~~ 90 (174)
.+.++++.|-... ..-+..+++++.+. ..++++..++.. .+ + ..+..+.+++.+
T Consensus 549 ~kpiIl~VGRL~~-----~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~f 623 (784)
T TIGR02470 549 NKPIIFSMARLDR-----VKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRW 623 (784)
T ss_pred CCcEEEEEeCCCc-----cCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3456777887754 22355566665443 235555554321 00 0 001134578888
Q ss_pred eecC-Cc---hhhhcC--CCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHH
Q psy16939 91 QKWY-PQ---TDILAH--PNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQ 160 (174)
Q Consensus 91 ~~~~-p~---~~~l~~--~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~ 160 (174)
.++. +. ..++.+ ..+|+||.-. -..++.||+++|+|+|.-...+ .+..+++-.-|..++.. +.+
T Consensus 624 lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg~tGfLVdp~--D~e 697 (784)
T TIGR02470 624 IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDGVSGFHIDPY--HGE 697 (784)
T ss_pred ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCCC--CHH
Confidence 8874 32 233321 2457888643 3468999999999999864432 33455555678888654 578
Q ss_pred HHHHHHHHhh
Q psy16939 161 SFLKNAQTML 170 (174)
Q Consensus 161 ~l~~al~~ll 170 (174)
++.+++.+++
T Consensus 698 aLA~aL~~ll 707 (784)
T TIGR02470 698 EAAEKIVDFF 707 (784)
T ss_pred HHHHHHHHHH
Confidence 8888888765
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.55 Score=36.99 Aligned_cols=131 Identities=11% Similarity=0.137 Sum_probs=78.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-CC---ccccccCCCCCEEEeecCC---chhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-ND---PVLNAKTLPDNVFIQKWYP---QTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~~---~~~~~~~~~~nv~~~~~~p---~~~~l~~~~ 104 (174)
++.|++..|+......++.+.+.++++.+.+.+.++++..|+. +. .++.+ .. .++.+.+-.+ ...++ ..
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~-~~-~~~~l~g~~sL~elaali--~~ 253 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAE-GF-PYVEVLPKLSLEQVARVL--AG 253 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHc-cC-CcceecCCCCHHHHHHHH--Hh
Confidence 4566555555443345899999999999987777877654432 21 11111 11 2333433333 22344 77
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEec--cccchHH----HHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGV--PFFGDQY----RNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~----~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
||++|+.-. |.++=|.+.|+|++.+ |...... .|...+... ... -.+.+++++.++++++|+
T Consensus 254 a~l~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~~--~~c--m~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 254 AKAVVSVDT-GLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRSP--GKS--MADLSAETVFQKLETLIS 321 (322)
T ss_pred CCEEEecCC-cHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecCC--Ccc--cccCCHHHHHHHHHHHhh
Confidence 999999886 5788899999999998 5422110 011111100 111 246799999999999875
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=93.30 E-value=1.7 Score=36.23 Aligned_cols=76 Identities=14% Similarity=0.081 Sum_probs=48.6
Q ss_pred EeecCCchhhhcC-CCccEEEec---CC-hhhHHHHHHcCCC---eEeccccchHHHHHHHHHHcCceeEecCCCCCHHH
Q psy16939 90 IQKWYPQTDILAH-PNLRLFITH---GG-ISSLMEASSLGVP---VLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQS 161 (174)
Q Consensus 90 ~~~~~p~~~~l~~-~~~~~~I~h---gG-~~t~~eal~~g~P---~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~ 161 (174)
+.+++++.++..+ ..||+++.- -| ..++.||+++|+| .+++....--... ..-|+.++.. +.++
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~------~~~g~lv~p~--d~~~ 416 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE------LSGALLVNPY--DIDE 416 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh------cCCCEEECCC--CHHH
Confidence 3456676654332 789999963 33 4567899999999 4444332211100 2346676543 6899
Q ss_pred HHHHHHHhhcCC
Q psy16939 162 FLKNAQTMLNDP 173 (174)
Q Consensus 162 l~~al~~ll~~~ 173 (174)
+.+++.++++++
T Consensus 417 la~ai~~~l~~~ 428 (460)
T cd03788 417 VADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHcCC
Confidence 999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.5 Score=37.65 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=81.5
Q ss_pred CCeEEEEcCCCc-CCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cccccCCCC----C-EEEeecCCch---hh
Q psy16939 32 GGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VLNAKTLPD----N-VFIQKWYPQT---DI 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~~----n-v~~~~~~p~~---~~ 99 (174)
++.|.+..|+.. ....++.+.+.++++.+...+.++++..++.+.+ ++.+ ..+. + +-+.+-.+.. .+
T Consensus 180 ~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~-~~~~~~~~~~~~l~g~~sL~el~al 258 (348)
T PRK10916 180 RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILA-ALNTEQQAWCRNLAGETQLEQAVIL 258 (348)
T ss_pred CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHH-hcccccccceeeccCCCCHHHHHHH
Confidence 588999998853 3446899999999999876677877765543322 1111 1111 1 2223333322 34
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEec--cccchHHH----HHHHHHHc-Cce----------eEecCCCCCHHHH
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGV--PFFGDQYR----NMVLLRHR-GYA----------LIEPIQTLTKQSF 162 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~~----na~~l~~~-G~g----------~~l~~~~~~~~~l 162 (174)
+ ..|+++|+.-. |-++=|.+.|+|++.+ |....... +...+... +.. -.---++.+++++
T Consensus 259 i--~~a~l~I~nDT-Gp~HlAaA~g~P~valfGpt~p~~~~P~~~~~~vi~~~~~~~~~~~~~c~~~~~~cm~~I~~~~V 335 (348)
T PRK10916 259 I--AACKAIVTNDS-GLMHVAAALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRV 335 (348)
T ss_pred H--HhCCEEEecCC-hHHHHHHHhCCCEEEEECCCCccccCCCCCCeEEEEccCCcccccCCCCCCchhhhhhhCCHHHH
Confidence 5 67999999875 5788899999999987 54221110 00101100 000 0000134689999
Q ss_pred HHHHHHhhcCC
Q psy16939 163 LKNAQTMLNDP 173 (174)
Q Consensus 163 ~~al~~ll~~~ 173 (174)
.+++++++...
T Consensus 336 ~~~~~~ll~~~ 346 (348)
T PRK10916 336 LEELNALLLQE 346 (348)
T ss_pred HHHHHHHhhcc
Confidence 99999998763
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.66 Score=36.60 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=66.9
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCC---CCCCHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCCCEEE-eecC
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDP---TKLSEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPDNVFI-QKWY 94 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~---~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~nv~~-~~~~ 94 (174)
+++-+-+.-.+ .+.|+.=.=+.... .+-..+....+++.|...+ ++...... ..++.+ .-.|+.+ .+-+
T Consensus 170 ~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g---iV~ipr~~~~~eife--~~~n~i~pk~~v 244 (346)
T COG1817 170 PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG---IVLIPREKEQAEIFE--GYRNIIIPKKAV 244 (346)
T ss_pred HHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc---EEEecCchhHHHHHh--hhccccCCcccc
Confidence 34444444444 46777655443322 1123445788888887777 44344332 222222 2233332 3345
Q ss_pred CchhhhcCCCccEEEecCChhhHHHHHHcCCCeEec-cccchHHHHHHHHHHcCcee
Q psy16939 95 PQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGV-PFFGDQYRNMVLLRHRGYAL 150 (174)
Q Consensus 95 p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v-P~~~dQ~~na~~l~~~G~g~ 150 (174)
+..+++.+ |+++|+-|| +...||...|+|.|.+ |- .-...-+++.+.|.=.
T Consensus 245 D~l~Llyy--a~lvig~gg-TMarEaAlLGtpaIs~~pG--kll~vdk~lie~G~~~ 296 (346)
T COG1817 245 DTLSLLYY--ATLVIGAGG-TMAREAALLGTPAISCYPG--KLLAVDKYLIEKGLLY 296 (346)
T ss_pred cHHHHHhh--hheeecCCc-hHHHHHHHhCCceEEecCC--ccccccHHHHhcCcee
Confidence 66778855 999998777 4788999999999988 42 2222334445555433
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.99 E-value=1 Score=36.46 Aligned_cols=132 Identities=17% Similarity=0.150 Sum_probs=79.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC-Ccccc--ccCCCCCEEEeecC---CchhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN-DPVLN--AKTLPDNVFIQKWY---PQTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~-~~~~~--~~~~~~nv~~~~~~---p~~~~l~~~~ 104 (174)
++.+++++=-...-...-.+..+.+.+.++.. ...++.-..... ..++. .-...+++++.+.+ +...++ ..
T Consensus 204 ~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~--~~ 281 (383)
T COG0381 204 KKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLM--KN 281 (383)
T ss_pred CcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHH--Hh
Confidence 56888887443321111133444444455444 234554443331 11111 11233468887754 555566 56
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|-+++|-.|. ..-||...|+|++++=..-+++. ..++|.-+.+.. +.+.+.+++.++++++
T Consensus 282 a~~iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lvg~---~~~~i~~~~~~ll~~~ 342 (383)
T COG0381 282 AFLILTDSGG-IQEEAPSLGKPVLVLRDTTERPE----GVEAGTNILVGT---DEENILDAATELLEDE 342 (383)
T ss_pred ceEEEecCCc-hhhhHHhcCCcEEeeccCCCCcc----ceecCceEEeCc---cHHHHHHHHHHHhhCh
Confidence 9999999984 68899999999999966666665 334566666643 5688999998888764
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.74 Score=35.35 Aligned_cols=97 Identities=16% Similarity=0.101 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCcCC-----CCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCc----c-cccc-CCCCCEEEeecCCchhh
Q psy16939 32 GGFVYMSFGSVVDP-----TKLSEETKLGFLEVFKQL-KLPIFWKIDITNDP----V-LNAK-TLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~-----~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~----~-~~~~-~~~~nv~~~~~~p~~~~ 99 (174)
++.|+|-+-...-. ........+.+.+.++.. +.++++...+.... + +... .....+.+.+-.+-.++
T Consensus 117 ~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 196 (269)
T PF05159_consen 117 KKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYEL 196 (269)
T ss_pred CCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHH
Confidence 67788776433210 001123344444455444 35677766552110 1 1110 12334445556788888
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEecc
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVP 131 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP 131 (174)
+ ..||.+||-.+. +-.||+.+|+|++++-
T Consensus 197 l--~~s~~VvtinSt-vGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 197 L--EQSDAVVTINST-VGLEALLHGKPVIVFG 225 (269)
T ss_pred H--HhCCEEEEECCH-HHHHHHHcCCceEEec
Confidence 8 679999999985 8999999999999984
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >KOG4626|consensus | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.9 Score=39.27 Aligned_cols=118 Identities=16% Similarity=0.234 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc--c----cc-cCCCCCEEEeecCCchhh-----
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV--L----NA-KTLPDNVFIQKWYPQTDI----- 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~--~----~~-~~~~~nv~~~~~~p~~~~----- 99 (174)
..+||.+|--... +.++.++.-.+.|++.|..++|..+.....+ | .+ .--|+++.+.+-....+-
T Consensus 758 d~vvf~~FNqLyK---idP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~ 834 (966)
T KOG4626|consen 758 DAVVFCNFNQLYK---IDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQ 834 (966)
T ss_pred CeEEEeechhhhc---CCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhh
Confidence 4677777766655 7889999999999999999999876532111 1 00 023556666665443322
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchH-HHHHHHHHHcCceeEec
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQ-YRNMVLLRHRGYALIEP 153 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ-~~na~~l~~~G~g~~l~ 153 (174)
|+.-..|-..+. |..|.+|.+..|+|||..|.--.- ..-+..+...|+|-.+-
T Consensus 835 LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 835 LADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred hhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 211223444555 457899999999999999974433 33344556678887654
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.24 Score=39.95 Aligned_cols=148 Identities=10% Similarity=0.046 Sum_probs=81.0
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh-hCC-CcEEEEecCCCCccccccCC--C---CCEEEeec
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFK-QLK-LPIFWKIDITNDPVLNAKTL--P---DNVFIQKW 93 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-~~~-~~~i~~~~~~~~~~~~~~~~--~---~nv~~~~~ 93 (174)
.+.+-+.... ++++.+..||.......--..+.+.++.+. +.+ .+|++-.......+...... . .+..+.+.
T Consensus 177 ~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (381)
T COG0763 177 AAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDG 256 (381)
T ss_pred HHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCc
Confidence 3444443333 789999999986521111122333333333 333 47887766543221100011 1 22222221
Q ss_pred CCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccc-cchHHHHHHHHHHcCce----eEe--------cCCCCCHH
Q psy16939 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPF-FGDQYRNMVLLRHRGYA----LIE--------PIQTLTKQ 160 (174)
Q Consensus 94 ~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~-~~dQ~~na~~l~~~G~g----~~l--------~~~~~~~~ 160 (174)
- ..+.+ ..||+++..+|. .+.|+..+|+|||+.=. ..=-+.-++++.+.... +.+ -.++.+++
T Consensus 257 ~-~~~a~--~~aD~al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe 332 (381)
T COG0763 257 E-KRKAF--AAADAALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPE 332 (381)
T ss_pred h-HHHHH--HHhhHHHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHH
Confidence 1 22345 679999999995 67899999999998722 11223345555543322 111 12467899
Q ss_pred HHHHHHHHhhcCC
Q psy16939 161 SFLKNAQTMLNDP 173 (174)
Q Consensus 161 ~l~~al~~ll~~~ 173 (174)
.|.+++..++.|+
T Consensus 333 ~la~~l~~ll~~~ 345 (381)
T COG0763 333 NLARALEELLLNG 345 (381)
T ss_pred HHHHHHHHHhcCh
Confidence 9999999998875
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=92.24 E-value=2.8 Score=38.13 Aligned_cols=133 Identities=11% Similarity=-0.054 Sum_probs=74.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC------ccccc-cCCCCCEEEeecCCch---hhhcC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND------PVLNA-KTLPDNVFIQKWYPQT---DILAH 102 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~------~~~~~-~~~~~nv~~~~~~p~~---~~l~~ 102 (174)
.+++...|...... ..+.+.+.+..+...+.++++...+... ..+.. ....+++.+..+++.. .++
T Consensus 779 ~pLIg~VGRL~~QK--GiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IY-- 854 (977)
T PLN02939 779 QPLVGCITRLVPQK--GVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIY-- 854 (977)
T ss_pred ceEEEEeecCCccc--ChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHH--
Confidence 35666777765421 2223333232222345677776544221 11111 1235678888887764 355
Q ss_pred CCccEEEecC----ChhhHHHHHHcCCCeEeccccc--hHHHH--HHHH-HHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 103 PNLRLFITHG----GISSLMEASSLGVPVLGVPFFG--DQYRN--MVLL-RHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 103 ~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~--dQ~~n--a~~l-~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+.+|+|+.-. -..+.+||+++|+|.|+-...+ |...+ ...+ +.-+-|..+... +.+++..++.+++.
T Consensus 855 AaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~--D~eaLa~AL~rAL~ 930 (977)
T PLN02939 855 AASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTP--DEQGLNSALERAFN 930 (977)
T ss_pred HhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCC--CHHHHHHHHHHHHH
Confidence 7899999752 2458999999999998765432 21111 0111 112567776543 67888888877653
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=92.23 E-value=2.1 Score=34.30 Aligned_cols=92 Identities=14% Similarity=0.058 Sum_probs=53.9
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeec--CC--------------
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKW--YP-------------- 95 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~--~p-------------- 95 (174)
++++.+.||.+. ---.-++++.|++.+++++|.......+. +.. ...-.+...+. ++
T Consensus 3 ~i~~~~GGTGGH-----i~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~-~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGH-----VTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIE-KENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHH-----HHHHHHHHHHHHhCCCEEEEEECCCccccccCc-ccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 445555555543 22355667777777889988876544332 100 00011111111 11
Q ss_pred ------chhhhcCCCccEEEecCChhh---HHHHHHcCCCeEec
Q psy16939 96 ------QTDILAHPNLRLFITHGGISS---LMEASSLGVPVLGV 130 (174)
Q Consensus 96 ------~~~~l~~~~~~~~I~hgG~~t---~~eal~~g~P~i~v 130 (174)
-..++..-+-|++|++||+-+ +..|...|+|.++.
T Consensus 77 ~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 012244467899999999986 89999999999886
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=91.75 E-value=4.6 Score=37.22 Aligned_cols=134 Identities=6% Similarity=-0.141 Sum_probs=72.9
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC------cccccc---CCCCCEEEeecCCch---hhh
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND------PVLNAK---TLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~------~~~~~~---~~~~nv~~~~~~p~~---~~l 100 (174)
.+++...|-.... -..+.+...+..+.+.+.++++...+... ..+... ..++++.+....+.. .++
T Consensus 840 ~plVg~VGRL~~q--KGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iy 917 (1036)
T PLN02316 840 LPLVGIITRLTHQ--KGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIY 917 (1036)
T ss_pred CeEEEEEeccccc--cCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHH
Confidence 4566667776542 12233333233222335677775543221 111110 125677776555543 345
Q ss_pred cCCCccEEEec----CChhhHHHHHHcCCCeEeccccc--hHHHHH----HHHHH---cCceeEecCCCCCHHHHHHHHH
Q psy16939 101 AHPNLRLFITH----GGISSLMEASSLGVPVLGVPFFG--DQYRNM----VLLRH---RGYALIEPIQTLTKQSFLKNAQ 167 (174)
Q Consensus 101 ~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~--dQ~~na----~~l~~---~G~g~~l~~~~~~~~~l~~al~ 167 (174)
..+|+++.- +=..+.+||+++|+|.|+-...+ |..... ..-+. .+-|..++. .+++.|..+|.
T Consensus 918 --aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~--~d~~aLa~AL~ 993 (1036)
T PLN02316 918 --AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG--ADAAGVDYALN 993 (1036)
T ss_pred --HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC--CCHHHHHHHHH
Confidence 889999954 22468999999999888754321 221111 00011 246777754 36788888888
Q ss_pred HhhcC
Q psy16939 168 TMLND 172 (174)
Q Consensus 168 ~ll~~ 172 (174)
+++.+
T Consensus 994 raL~~ 998 (1036)
T PLN02316 994 RAISA 998 (1036)
T ss_pred HHHhh
Confidence 88764
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=91.25 E-value=6.7 Score=31.57 Aligned_cols=149 Identities=17% Similarity=0.108 Sum_probs=86.8
Q ss_pred CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE--ecCCC--Cc-cc----cccCCCCC
Q psy16939 18 DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK--IDITN--DP-VL----NAKTLPDN 87 (174)
Q Consensus 18 ~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~--~~~~~--~~-~~----~~~~~~~n 87 (174)
+++..+..--.... +..+-|-.|.++..++.-.+.++++.+-+ ..+.++++- ++... .. ++ .+....++
T Consensus 168 ~m~~~~~~~~~~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~-~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~ 246 (360)
T PF07429_consen 168 RMDPALTLSEKNKKNKGKLTILVGNSGDPSNNHIEALEALKQQF-GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAEN 246 (360)
T ss_pred CCchhhhccccccCCCCceEEEEcCCCCCCccHHHHHHHHHHhc-CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccc
Confidence 34454433322222 45666777777653322233344443322 123455553 44321 10 00 00012357
Q ss_pred EEE-eecCCchhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHH
Q psy16939 88 VFI-QKWYPQTDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQS 161 (174)
Q Consensus 88 v~~-~~~~p~~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~ 161 (174)
+.+ .+++|..+.+.. .+||+.|-. =|.|+++-.+..|+|+++--. -+. -..+.+.|+-+....++++...
T Consensus 247 ~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~---np~-~~~l~~~~ipVlf~~d~L~~~~ 322 (360)
T PF07429_consen 247 FQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRD---NPF-WQDLKEQGIPVLFYGDELDEAL 322 (360)
T ss_pred eeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecC---ChH-HHHHHhCCCeEEeccccCCHHH
Confidence 765 468886553322 789998865 489999999999999988732 222 3567777888887778899999
Q ss_pred HHHHHHHhhc
Q psy16939 162 FLKNAQTMLN 171 (174)
Q Consensus 162 l~~al~~ll~ 171 (174)
++++=+++..
T Consensus 323 v~ea~rql~~ 332 (360)
T PF07429_consen 323 VREAQRQLAN 332 (360)
T ss_pred HHHHHHHHhh
Confidence 9998887754
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.23 E-value=3.1 Score=32.61 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHc----C
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSL----G 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~----g 124 (174)
..+.+..+.+.+++.+..+.+........ . ..+ ....+..+.- ..+|++|+-||-||+.+++.. +
T Consensus 19 ~~e~~~~i~~~L~~~g~~v~v~~~~~~~~-----~-~~~---~~~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~ 87 (291)
T PRK02155 19 IAEPLESLAAFLAKRGFEVVFEADTARNI-----G-LTG---YPALTPEEIG--ARADLAVVLGGDGTMLGIGRQLAPYG 87 (291)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhhhc-----C-ccc---ccccChhHhc--cCCCEEEEECCcHHHHHHHHHhcCCC
Confidence 35668888888888888777643211100 0 000 0001222222 468999999999999999763 6
Q ss_pred CCeEecc
Q psy16939 125 VPVLGVP 131 (174)
Q Consensus 125 ~P~i~vP 131 (174)
+|++.+-
T Consensus 88 ~pilGIn 94 (291)
T PRK02155 88 VPLIGIN 94 (291)
T ss_pred CCEEEEc
Confidence 7888775
|
|
| >TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1 | Back alignment and domain information |
|---|
Probab=90.53 E-value=3.6 Score=29.21 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=53.7
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec-CCchh
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW-YPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ 98 (174)
..++-+++.+. +..+++.|.. ..+..+.++..+.+-+++=..+...... . .........++ .+...
T Consensus 20 A~~lg~~La~~--g~~lv~Gg~~--------GlM~a~a~ga~~~gg~viGVlp~~l~~~--~-~~~~~~i~~~~~~~Rk~ 86 (159)
T TIGR00725 20 AYRLGKELAKK--GHILINGGRT--------GVMEAVSKGAREAGGLVVGILPDEDFAG--N-PYLTIKVKTGMNFARNF 86 (159)
T ss_pred HHHHHHHHHHC--CCEEEcCCch--------hHHHHHHHHHHHCCCeEEEECChhhccC--C-CCceEEEECCCcchHHH
Confidence 34556666554 4677774433 3466677666666665554444322110 0 11112222333 34444
Q ss_pred hhcCCCccEEE-ecCChhhHHH---HHHcCCCeEeccc
Q psy16939 99 ILAHPNLRLFI-THGGISSLME---ASSLGVPVLGVPF 132 (174)
Q Consensus 99 ~l~~~~~~~~I-~hgG~~t~~e---al~~g~P~i~vP~ 132 (174)
++. ..+|++| --||.||+-| ++.+++|+++++.
T Consensus 87 ~m~-~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 87 ILV-RSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred HHH-HHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 443 4555554 4577777655 5889999999975
|
This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=90.39 E-value=1 Score=28.32 Aligned_cols=54 Identities=17% Similarity=0.255 Sum_probs=37.9
Q ss_pred cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 111 HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRG-YALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 111 hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G-~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|-...+.|++++|+|+|.-+. ......+ ..| -++..+ +.+++.+++..+++||
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~~~~~~~~~----~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-EDGEHIITYN----DPEELAEKIEYLLENP 63 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CCCCeEEEEC----CHHHHHHHHHHHHCCH
Confidence 4556689999999999999854 2222222 224 344443 7899999999999875
|
|
| >TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2 | Back alignment and domain information |
|---|
Probab=89.46 E-value=6.4 Score=28.50 Aligned_cols=117 Identities=11% Similarity=-0.005 Sum_probs=62.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-cccccCCCCCEEEeecCC-chh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDNVFIQKWYP-QTD 98 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~nv~~~~~~p-~~~ 98 (174)
.++-+++.+. ...+|+.|+. ...+..+.++..+.+-+++=........ +... .........+.+. ...
T Consensus 22 ~~lG~~la~~--g~~lV~GGg~-------~GlM~a~a~ga~~~gG~viGi~p~~l~~~~~~~-~~~~~~i~~~~~~~Rk~ 91 (178)
T TIGR00730 22 AELGAYLAGQ--GWGLVYGGGR-------VGLMGAIADAAMENGGTAVGVNPSGLFSGEVVH-QNLTELIEVNGMHERKA 91 (178)
T ss_pred HHHHHHHHHC--CCEEEECCCh-------HhHHHHHHHHHHhcCCeEEEecchhhhhhhccC-CCCCceEEECCHHHHHH
Confidence 3455566554 5778888763 2347777777776666554433221110 0000 1122334444443 334
Q ss_pred hhcCCCccEEE-ecCChhhHHHHHH---------cCCCeEeccc--cchH-HHHHHHHHHcCc
Q psy16939 99 ILAHPNLRLFI-THGGISSLMEASS---------LGVPVLGVPF--FGDQ-YRNMVLLRHRGY 148 (174)
Q Consensus 99 ~l~~~~~~~~I-~hgG~~t~~eal~---------~g~P~i~vP~--~~dQ-~~na~~l~~~G~ 148 (174)
+|. ..+|++| --||.||+-|... +.+|++++-. ++|. ...-+.+.+.|.
T Consensus 92 ~m~-~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 92 MMA-ELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred HHH-HhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 443 4566655 4677999988743 4999999832 2333 223345556664
|
This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. |
| >PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=88.79 E-value=5.9 Score=30.99 Aligned_cols=70 Identities=16% Similarity=0.243 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH----cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS----LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~----~g 124 (174)
..+..+++.+.|++.+..+++...... ..... .+ +..++. ..+|++|+-||-||+..+.. .+
T Consensus 23 ~~~~~~~i~~~l~~~g~~~~~~~~~~~-------~~~~~----~~-~~~~~~--~~~Dlvi~iGGDGT~L~aa~~~~~~~ 88 (287)
T PRK14077 23 LDKEILKLQKILSIYKVEILLEKESAE-------ILDLP----GY-GLDELF--KISDFLISLGGDGTLISLCRKAAEYD 88 (287)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhh-------hhccc----cc-chhhcc--cCCCEEEEECCCHHHHHHHHHhcCCC
Confidence 466788888888877777666322111 01000 00 112222 46999999999999987755 37
Q ss_pred CCeEeccc
Q psy16939 125 VPVLGVPF 132 (174)
Q Consensus 125 ~P~i~vP~ 132 (174)
+|++.+-.
T Consensus 89 ~PilGIN~ 96 (287)
T PRK14077 89 KFVLGIHA 96 (287)
T ss_pred CcEEEEeC
Confidence 89888853
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=88.33 E-value=1.7 Score=36.06 Aligned_cols=113 Identities=14% Similarity=0.171 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhhCCC-cEEEEecCCCCccccc-cCCCCCEEEeec-CC--chhhhcCCCccEEE--ecC--ChhhHHHH
Q psy16939 50 EETKLGFLEVFKQLKL-PIFWKIDITNDPVLNA-KTLPDNVFIQKW-YP--QTDILAHPNLRLFI--THG--GISSLMEA 120 (174)
Q Consensus 50 ~~~~~~i~~~l~~~~~-~~i~~~~~~~~~~~~~-~~~~~nv~~~~~-~p--~~~~l~~~~~~~~I--~hg--G~~t~~ea 120 (174)
...++.+.....++|. +|-+.++.+-.+++.. .+. +|+...+- .+ ..+++ ..||+.+ +|| -..++.||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~~L~~y-~nvvly~~~~~~~l~~ly--~~~dlyLdin~~e~~~~al~eA 367 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTEMSSKLMSLDKY-DNVKLYPNITTQKIQELY--QTCDIYLDINHGNEILNAVRRA 367 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCcccHHHHHHHhc-CCcEEECCcChHHHHHHH--HhccEEEEccccccHHHHHHHH
Confidence 4557777777777765 6665444331122111 133 66666665 44 33455 5666654 454 47899999
Q ss_pred HHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 121 SSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 121 l~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+.+|+|++..=...+.. ..+.. |..+..+ +.+++.++|+++|+++
T Consensus 368 ~~~G~pI~afd~t~~~~---~~i~~---g~l~~~~--~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 368 FEYNLLILGFEETAHNR---DFIAS---ENIFEHN--EVDQLISKLKDLLNDP 412 (438)
T ss_pred HHcCCcEEEEecccCCc---ccccC---CceecCC--CHHHHHHHHHHHhcCH
Confidence 99999999874332211 12222 4444333 5788999999888775
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=88.21 E-value=9.2 Score=28.73 Aligned_cols=80 Identities=21% Similarity=0.342 Sum_probs=50.4
Q ss_pred CCCEEEeecCCch---hhhcCCCccEEEec---CCh-hhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCC
Q psy16939 85 PDNVFIQKWYPQT---DILAHPNLRLFITH---GGI-SSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL 157 (174)
Q Consensus 85 ~~nv~~~~~~p~~---~~l~~~~~~~~I~h---gG~-~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~ 157 (174)
..++.+.++++.. .++ ..+++++.. .|. .++.|++++|+|++.-... .....+...+.|......
T Consensus 256 ~~~v~~~g~~~~~~~~~~~--~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~~~g~~~~~~-- 327 (381)
T COG0438 256 EDNVKFLGYVPDEELAELL--ASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDGETGLLVPPG-- 327 (381)
T ss_pred CCcEEEecccCHHHHHHHH--HhCCEEEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCCCceEecCCC--
Confidence 4678888888822 234 568888887 244 3469999999999777542 112222222245533222
Q ss_pred CHHHHHHHHHHhhcC
Q psy16939 158 TKQSFLKNAQTMLND 172 (174)
Q Consensus 158 ~~~~l~~al~~ll~~ 172 (174)
..+++.+++..++++
T Consensus 328 ~~~~~~~~i~~~~~~ 342 (381)
T COG0438 328 DVEELADALEQLLED 342 (381)
T ss_pred CHHHHHHHHHHHhcC
Confidence 578888888887765
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=87.79 E-value=2.9 Score=34.89 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=49.7
Q ss_pred EeecCCchhhhcC-CCccEEEecC---C-hhhHHHHHHcCCC----eEeccccchHHHHHHHHHHcCceeEecCCCCCHH
Q psy16939 90 IQKWYPQTDILAH-PNLRLFITHG---G-ISSLMEASSLGVP----VLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQ 160 (174)
Q Consensus 90 ~~~~~p~~~~l~~-~~~~~~I~hg---G-~~t~~eal~~g~P----~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~ 160 (174)
+...+++.++.++ ..+|+++.-. | ..++.|++++|+| +|+--..+--. .+ +-|+.+++. +.+
T Consensus 340 l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~----~l---~~gllVnP~--d~~ 410 (456)
T TIGR02400 340 LNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ----EL---NGALLVNPY--DID 410 (456)
T ss_pred EcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH----Hh---CCcEEECCC--CHH
Confidence 3445666664332 8899999743 5 4578899999999 55544333211 12 246777543 689
Q ss_pred HHHHHHHHhhcCC
Q psy16939 161 SFLKNAQTMLNDP 173 (174)
Q Consensus 161 ~l~~al~~ll~~~ 173 (174)
++.++|.++++++
T Consensus 411 ~lA~aI~~aL~~~ 423 (456)
T TIGR02400 411 GMADAIARALTMP 423 (456)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999998754
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=87.71 E-value=7.3 Score=30.81 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCC-CccccccCCCC---CEEEeecCCc-hhhhcCCCccEEEecCChhhHHHHHHc
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITN-DPVLNAKTLPD---NVFIQKWYPQ-TDILAHPNLRLFITHGGISSLMEASSL 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~---nv~~~~~~p~-~~~l~~~~~~~~I~hgG~~t~~eal~~ 123 (174)
..+..+++.+.|.+.+..+.+...... ... ..+. ..- ...++. ..+. ..+|++|+=||-||+..+...
T Consensus 19 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~--~~~D~vi~lGGDGT~L~aar~ 91 (306)
T PRK03372 19 ATEAARRVAKQLGDAGIGVRVLDAEAVDLGA----THPAPDDFRA-MEVVDADPDAA--DGCELVLVLGGDGTILRAAEL 91 (306)
T ss_pred HHHHHHHHHHHHHHCCCEEEEeechhhhhcc----cccccccccc-cccccchhhcc--cCCCEEEEEcCCHHHHHHHHH
Confidence 356678888888888877766432111 110 0000 000 011121 2222 468999999999999998753
Q ss_pred ----CCCeEeccc
Q psy16939 124 ----GVPVLGVPF 132 (174)
Q Consensus 124 ----g~P~i~vP~ 132 (174)
++|++.|..
T Consensus 92 ~~~~~~PilGIN~ 104 (306)
T PRK03372 92 ARAADVPVLGVNL 104 (306)
T ss_pred hccCCCcEEEEec
Confidence 789998864
|
|
| >PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=87.59 E-value=7.3 Score=30.62 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH----cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS----LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~----~g 124 (174)
..+..+++.+.|++.+..+.+.-.... ..+.+- ....+...+- ..+|++|+=||-||+.+++. .+
T Consensus 18 a~e~~~~i~~~L~~~giev~v~~~~~~-------~~~~~~--~~~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~ 86 (295)
T PRK01231 18 VVETLRRLKDFLLDRGLEVILDEETAE-------VLPGHG--LQTVSRKLLG--EVCDLVIVVGGDGSLLGAARALARHN 86 (295)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhh-------hcCccc--ccccchhhcc--cCCCEEEEEeCcHHHHHHHHHhcCCC
Confidence 466788888888888877655322111 011100 0112222222 35899999999999999875 36
Q ss_pred CCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 125 VPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 125 ~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
+|++.+... .+|-. .+.+.+++.+++.+++++
T Consensus 87 ~Pvlgin~G-------------~lGFl---~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 87 VPVLGINRG-------------RLGFL---TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred CCEEEEeCC-------------ccccc---ccCCHHHHHHHHHHHHcC
Confidence 788888641 12211 234567777777777654
|
|
| >PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.98 E-value=9.6 Score=29.26 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH-cCCCe
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS-LGVPV 127 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~-~g~P~ 127 (174)
.....+++.+.+.+.+..+.|..... . .- ..+|++|+=||-||+..++. .++|+
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~--~---------------------~~--~~~d~vi~iGGDGT~L~a~~~~~~Pi 65 (256)
T PRK14075 11 KEKEAKFLKEKISKEHEVVEFCEASA--S---------------------GK--VTADLIIVVGGDGTVLKAAKKVGTPL 65 (256)
T ss_pred HHHHHHHHHHHHHHcCCeeEeecccc--c---------------------cc--CCCCEEEEECCcHHHHHHHHHcCCCE
Confidence 45667777777777776666542211 0 01 46899999999999998876 57888
Q ss_pred Eecc
Q psy16939 128 LGVP 131 (174)
Q Consensus 128 i~vP 131 (174)
+.+-
T Consensus 66 lgin 69 (256)
T PRK14075 66 VGFK 69 (256)
T ss_pred EEEe
Confidence 8775
|
|
| >PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.74 E-value=2.2 Score=32.96 Aligned_cols=29 Identities=31% Similarity=0.361 Sum_probs=24.9
Q ss_pred CccEEEecCChhhHHHHHH------cCCCeEeccc
Q psy16939 104 NLRLFITHGGISSLMEASS------LGVPVLGVPF 132 (174)
Q Consensus 104 ~~~~~I~hgG~~t~~eal~------~g~P~i~vP~ 132 (174)
.+|++|+-||-||+..++. .++|++.+..
T Consensus 35 ~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~ 69 (265)
T PRK04885 35 NPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT 69 (265)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC
Confidence 4899999999999999975 4789888853
|
|
| >PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.63 E-value=8.4 Score=30.24 Aligned_cols=79 Identities=8% Similarity=0.191 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH----cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS----LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~----~g 124 (174)
..+..+++.+.|++.+..+++............ ....+. ..+.+...+. ..+|++|+=||-||+..+.. .+
T Consensus 14 ~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~--~~~dlvi~lGGDGT~L~aa~~~~~~~ 88 (292)
T PRK01911 14 ASPYIQELFDELEERGAEVLIEEKFLDFLKQDL-KFHPSY--DTFSDNEELD--GSADMVISIGGDGTFLRTATYVGNSN 88 (292)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhhhhcccc-cccccc--ccccchhhcc--cCCCEEEEECCcHHHHHHHHHhcCCC
Confidence 355678888888888887766432111000000 000000 0010112322 46899999999999998877 37
Q ss_pred CCeEeccc
Q psy16939 125 VPVLGVPF 132 (174)
Q Consensus 125 ~P~i~vP~ 132 (174)
+|++.+-.
T Consensus 89 ~PilGIN~ 96 (292)
T PRK01911 89 IPILGINT 96 (292)
T ss_pred CCEEEEec
Confidence 89888854
|
|
| >PLN02929 NADH kinase | Back alignment and domain information |
|---|
Probab=86.34 E-value=6.1 Score=31.17 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH---cCC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS---LGV 125 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~---~g~ 125 (174)
.++..+.+.+.|++.+..+....+ .++. ... ..+|++|+-||-||+..+.. .++
T Consensus 32 h~~~~~~~~~~L~~~gi~~~~v~r-~~~~--------------------~~~--~~~Dlvi~lGGDGT~L~aa~~~~~~i 88 (301)
T PLN02929 32 HKDTVNFCKDILQQKSVDWECVLR-NELS--------------------QPI--RDVDLVVAVGGDGTLLQASHFLDDSI 88 (301)
T ss_pred hHHHHHHHHHHHHHcCCEEEEeec-cccc--------------------ccc--CCCCEEEEECCcHHHHHHHHHcCCCC
Confidence 456677788888877776532221 1111 112 56899999999999998844 468
Q ss_pred CeEeccccc------hHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 126 PVLGVPFFG------DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 126 P~i~vP~~~------dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
|++.|-... +++.|... +..-.|-... .+.+++.+++++++++
T Consensus 89 PvlGIN~Gp~~~~~~~~~~~~~~-~~r~lGfL~~---~~~~~~~~~L~~il~g 137 (301)
T PLN02929 89 PVLGVNSDPTQKDEVEEYSDEFD-ARRSTGHLCA---ATAEDFEQVLDDVLFG 137 (301)
T ss_pred cEEEEECCCcccccccccccccc-cccCcccccc---CCHHHHHHHHHHHHcC
Confidence 999985421 23333311 1223444432 3678888888888865
|
|
| >PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.09 E-value=9.6 Score=29.98 Aligned_cols=77 Identities=13% Similarity=0.227 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCc-cccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH----c
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS----L 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~----~ 123 (174)
..+...++.+.|.+.+..+++.-...... .... ..+ +. ...+..++. ..+|++|+=||-||+..+.. .
T Consensus 19 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-~~~-~~---~~~~~~~~~--~~~D~vi~lGGDGT~L~aa~~~~~~ 91 (296)
T PRK04539 19 IQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQ-DTV-GC---HIVNKTELG--QYCDLVAVLGGDGTFLSVAREIAPR 91 (296)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecccccccchhcc-ccc-cc---cccchhhcC--cCCCEEEEECCcHHHHHHHHHhccc
Confidence 35667888888888888776632111100 0000 001 11 111222332 36999999999999999864 3
Q ss_pred CCCeEeccc
Q psy16939 124 GVPVLGVPF 132 (174)
Q Consensus 124 g~P~i~vP~ 132 (174)
++|++.+-.
T Consensus 92 ~~PilGIN~ 100 (296)
T PRK04539 92 AVPIIGINQ 100 (296)
T ss_pred CCCEEEEec
Confidence 789988853
|
|
| >PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=85.90 E-value=9.4 Score=29.96 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHH----cC
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASS----LG 124 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~----~g 124 (174)
..+..+++.+.|.+.+..+.+........ .. .+ ....+...+. ..+|++|+=||-||+..+.. .+
T Consensus 19 ~~~~~~~i~~~l~~~g~~v~~~~~~~~~~-----~~-~~---~~~~~~~~~~--~~~d~vi~lGGDGT~L~aa~~~~~~~ 87 (292)
T PRK03378 19 ALTTHEMLYHWLTSKGYEVIVEQQIAHEL-----QL-KN---VKTGTLAEIG--QQADLAIVVGGDGNMLGAARVLARYD 87 (292)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhhhc-----Cc-cc---ccccchhhcC--CCCCEEEEECCcHHHHHHHHHhcCCC
Confidence 35567788888887777766532111100 00 00 0011112222 46999999999999999974 36
Q ss_pred CCeEeccc
Q psy16939 125 VPVLGVPF 132 (174)
Q Consensus 125 ~P~i~vP~ 132 (174)
+|++.+-.
T Consensus 88 ~Pilgin~ 95 (292)
T PRK03378 88 IKVIGINR 95 (292)
T ss_pred CeEEEEEC
Confidence 78887743
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.02 E-value=11 Score=33.96 Aligned_cols=72 Identities=15% Similarity=0.018 Sum_probs=47.8
Q ss_pred cCCchhhhcC-CCccEEEecC---Chh-hHHHHHHcCCC---eEeccccchHHHHHHHHHHcC-ceeEecCCCCCHHHHH
Q psy16939 93 WYPQTDILAH-PNLRLFITHG---GIS-SLMEASSLGVP---VLGVPFFGDQYRNMVLLRHRG-YALIEPIQTLTKQSFL 163 (174)
Q Consensus 93 ~~p~~~~l~~-~~~~~~I~hg---G~~-t~~eal~~g~P---~i~vP~~~dQ~~na~~l~~~G-~g~~l~~~~~~~~~l~ 163 (174)
+++..++.++ ..||+++.-. |+| +..|++++|+| +++++.+.- .+.. .| .|+.+++. +.+++.
T Consensus 363 ~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~---l~~~allVnP~--D~~~lA 434 (797)
T PLN03063 363 SVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS---LGAGALLVNPW--NITEVS 434 (797)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhh---hcCCeEEECCC--CHHHHH
Confidence 4555543322 7899999764 655 66799999999 566654321 1111 23 57777654 789999
Q ss_pred HHHHHhhcC
Q psy16939 164 KNAQTMLND 172 (174)
Q Consensus 164 ~al~~ll~~ 172 (174)
++|.++|+.
T Consensus 435 ~AI~~aL~m 443 (797)
T PLN03063 435 SAIKEALNM 443 (797)
T ss_pred HHHHHHHhC
Confidence 999999874
|
|
| >PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=83.68 E-value=3.3 Score=32.68 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEE-ee--cCCchhhhcCCCccEEEecCChhhHHHHHHc--
Q psy16939 49 SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFI-QK--WYPQTDILAHPNLRLFITHGGISSLMEASSL-- 123 (174)
Q Consensus 49 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~-~~--~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~-- 123 (174)
..+...++.+.|.+.+..+.+.......... ..+.+... .+ ..+...+. ..+|++|+=||-||+..+...
T Consensus 15 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~Dlvi~iGGDGTlL~aar~~~ 89 (305)
T PRK02649 15 AVRTAEELQDKLEAAGWEVVRASSSGGILGY---ANPDQPVCHTGIDQLVPPGFD--SSMKFAIVLGGDGTVLSAARQLA 89 (305)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhhhcCc---cccccccccccccccChhhcc--cCcCEEEEEeCcHHHHHHHHHhc
Confidence 3566788888888888877664321111000 00000000 00 01112222 469999999999999999764
Q ss_pred --CCCeEeccc
Q psy16939 124 --GVPVLGVPF 132 (174)
Q Consensus 124 --g~P~i~vP~ 132 (174)
++|++.+-.
T Consensus 90 ~~~iPilGIN~ 100 (305)
T PRK02649 90 PCGIPLLTINT 100 (305)
T ss_pred CCCCcEEEEeC
Confidence 789888853
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=83.01 E-value=1.2 Score=35.79 Aligned_cols=111 Identities=10% Similarity=0.010 Sum_probs=59.1
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCccccc-cCCCCCEEEeec-CCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 53 KLGFLEVFKQLKLPIFWKIDITNDPVLNA-KTLPDNVFIQKW-YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 53 ~~~i~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~nv~~~~~-~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
.+++. .+...++.+++...+........ .....++...+. .+..++| ..+|+.||--.. .+.|.+..++|++..
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll--~~aDiLITDySS-i~fD~~~l~KPiify 294 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLL--AAADILITDYSS-IIFDFLLLNKPIIFY 294 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHHHHTT----TT-TTTEEE-TT-S-HHHHH--HT-SEEEESS-T-HHHHHGGGT--EEEE
T ss_pred HHHHH-HHhCCCcEEEEEeCchhhhchhhhhccCCcEEECCCCCCHHHHH--HhcCEEEEechh-HHHHHHHhCCCEEEE
Confidence 44444 55555566666544311111000 134567766554 4577888 679999999964 899999999999988
Q ss_pred cccchHHHHHH----HHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 131 PFFGDQYRNMV----LLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 131 P~~~dQ~~na~----~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
....|+....+ -.+....|..+. +.++|.++|.+++.
T Consensus 295 ~~D~~~Y~~~rg~~~~~~~~~pg~~~~----~~~eL~~~i~~~~~ 335 (369)
T PF04464_consen 295 QPDLEEYEKERGFYFDYEEDLPGPIVY----NFEELIEAIENIIE 335 (369)
T ss_dssp -TTTTTTTTTSSBSS-TTTSSSS-EES----SHHHHHHHHTTHHH
T ss_pred eccHHHHhhccCCCCchHhhCCCceeC----CHHHHHHHHHhhhh
Confidence 76555442210 011223333332 67888888887664
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=82.67 E-value=6 Score=31.10 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=26.7
Q ss_pred CCCccEEEecCChhhHHHHHHcCCCeEecc
Q psy16939 102 HPNLRLFITHGGISSLMEASSLGVPVLGVP 131 (174)
Q Consensus 102 ~~~~~~~I~hgG~~t~~eal~~g~P~i~vP 131 (174)
.-+-|++|+.++..+..-|-..|+|.+.+-
T Consensus 91 ~~~pDlVi~d~~~~~~~aA~~~~iP~i~i~ 120 (321)
T TIGR00661 91 EYNPDLIISDFEYSTVVAAKLLKIPVICIS 120 (321)
T ss_pred hcCCCEEEECCchHHHHHHHhcCCCEEEEe
Confidence 356799999999999999999999999763
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD) | Back alignment and domain information |
|---|
Probab=82.57 E-value=4.5 Score=32.54 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=50.7
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDIL 100 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l 100 (174)
+++.+.+....+++++|+-++... ....++++.+.|+..+..+.+..+-..-+.. . .-..-.+.+
T Consensus 15 ~~l~~~~~~~g~r~lvVt~~~~~~----~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~~---------~--~v~~~~~~~ 79 (357)
T cd08181 15 EKHGEELAALGKRALIVTGKSSAK----KNGSLDDVTKALEELGIEYEIFDEVEENPSL---------E--TIMEAVEIA 79 (357)
T ss_pred HHHHHHHHHcCCEEEEEeCCchHh----hcCcHHHHHHHHHHcCCeEEEeCCCCCCcCH---------H--HHHHHHHHH
Confidence 345555554444555555544422 1234677888888777765543221111100 0 000011122
Q ss_pred cCCCccEEEecCChhhHHHHHH----------------------cCCCeEecccc
Q psy16939 101 AHPNLRLFITHGGISSLMEASS----------------------LGVPVLGVPFF 133 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~----------------------~g~P~i~vP~~ 133 (174)
...++|++|.=||. |++++.. .++|++.||..
T Consensus 80 ~~~~~D~IIavGGG-SviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTt 133 (357)
T cd08181 80 KKFNADFVIGIGGG-SPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTT 133 (357)
T ss_pred HhcCCCEEEEeCCc-hHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCC
Confidence 22578999999985 5555432 26899999973
|
1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.77 E-value=6 Score=31.37 Aligned_cols=79 Identities=19% Similarity=0.099 Sum_probs=55.2
Q ss_pred CCEEEee-cCCch---hhhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCC
Q psy16939 86 DNVFIQK-WYPQT---DILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL 157 (174)
Q Consensus 86 ~nv~~~~-~~p~~---~~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~ 157 (174)
+++.+.. ++|.. .+| .+||+.|-.- |.||++-.+..|+|+++--. -+.+ ..+.+.|+-+..+.+.+
T Consensus 206 ~~~~~L~e~l~f~eYl~lL--~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fw-qdl~e~gv~Vlf~~d~L 279 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALL--RQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFW-QDLTEQGLPVLFTGDDL 279 (322)
T ss_pred ccEEehhhhCCHHHHHHHH--HhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchH-HHHHhCCCeEEecCCcc
Confidence 5666554 56654 456 7799887654 79999999999999998732 1222 23566688887777788
Q ss_pred CHHHHHHHHHHhh
Q psy16939 158 TKQSFLKNAQTML 170 (174)
Q Consensus 158 ~~~~l~~al~~ll 170 (174)
+...+.++=+++.
T Consensus 280 ~~~~v~e~~rql~ 292 (322)
T PRK02797 280 DEDIVREAQRQLA 292 (322)
T ss_pred cHHHHHHHHHHHH
Confidence 8888877755543
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=80.14 E-value=26 Score=27.37 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=52.2
Q ss_pred EEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-cccccCCCCCEEEeecCC------------------
Q psy16939 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDNVFIQKWYP------------------ 95 (174)
Q Consensus 35 v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~nv~~~~~~p------------------ 95 (174)
|+++.|..+. .......+++.|.+.++.+.+.+...... .... ...-.+...++..
T Consensus 2 ~~~~~~~~gG----~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (350)
T cd03785 2 ILIAGGGTGG----HIFPALALAEELRERGAEVLFLGTKRGLEARLVP-KAGIPLHTIPVGGLRRKGSLKKLKAPFKLLK 76 (350)
T ss_pred EEEEecCchh----hhhHHHHHHHHHHhCCCEEEEEECCCcchhhccc-ccCCceEEEEecCcCCCChHHHHHHHHHHHH
Confidence 6777777654 34567789999999999887766543221 1000 1111233332211
Q ss_pred ----chhhhcCCCccEEEecCChhh---HHHHHHcCCCeEecc
Q psy16939 96 ----QTDILAHPNLRLFITHGGISS---LMEASSLGVPVLGVP 131 (174)
Q Consensus 96 ----~~~~l~~~~~~~~I~hgG~~t---~~eal~~g~P~i~vP 131 (174)
...++...+-|++++|++..+ ..-+...|+|.+...
T Consensus 77 ~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~ 119 (350)
T cd03785 77 GVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHE 119 (350)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEc
Confidence 112232346899999986543 334566789998753
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 174 | ||||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 3e-18 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 2e-11 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 9e-10 | ||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 4e-09 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 9e-08 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 2e-07 | ||
| 2iyf_A | 430 | The Crystal Structure Of Macrolide Glycosyltransfer | 2e-07 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 6e-06 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 6e-06 | ||
| 3otg_A | 412 | Crystal Structure Of Calg1, Calicheamicin Glycostyl | 6e-05 | ||
| 3ia7_A | 402 | Crystal Structure Of Calg4, The Calicheamicin Glyco | 1e-04 |
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 430 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin Glycostyltransferase, Tdp Bound Form Length = 412 | Back alignment and structure |
|
| >pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin Glycosyltransferase Length = 402 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 4e-55
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 22 DLQQRAD-AAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLN 80
+++ + + G V S GS+V + ++EE Q+ + W+ D
Sbjct: 10 EMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQKVLWRFDGNKPD--- 64
Query: 81 AKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM 140
TL N + KW PQ D+L HP R FITHGG + + EA G+P++G+P F DQ N+
Sbjct: 65 --TLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNI 122
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
++ RG A+ T++ L + ++NDP
Sbjct: 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVINDPS 156
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 8e-28
Identities = 36/147 (24%), Positives = 51/147 (34%), Gaps = 5/147 (3%)
Query: 28 DAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDN 87
A V +S GS + F L LPDN
Sbjct: 228 PAGAEKVVLVSLGSAFTKQ---PAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDN 284
Query: 88 VFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRG 147
V + W PQ IL LF+TH G E + P++ VP DQ+ N +L+ G
Sbjct: 285 VEVHDWVPQLAILRQA--DLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLG 342
Query: 148 YALIEPIQTLTKQSFLKNAQTMLNDPR 174
A + T + A +++DP
Sbjct: 343 VARKLATEEATADLLRETALALVDDPE 369
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 9e-25
Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 8/148 (5%)
Query: 28 DAAKGGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
+ ++ GS D L L + + DP +P
Sbjct: 251 PGDGRPVLLIALGSAFTDHLDFYRTC----LSAVDGLDWHVVLSVGRFVDPAD-LGEVPP 305
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
NV + +W PQ DIL FITH G+ S MEA S VP++ VP +Q N +
Sbjct: 306 NVEVHQWVPQLDILTK--ASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL 363
Query: 147 GYALIEPIQTLTKQSFLKNAQTMLNDPR 174
G P +T + + + +DP
Sbjct: 364 GLGRHIPRDQVTAEKLREAVLAVASDPG 391
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 3e-20
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
Query: 27 ADAAKGGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLP 85
+ +S G+ + + + F + I DP + LP
Sbjct: 226 PPRPDAPVLLVSLGNQFNEHPEFFRAC----AQAFADTPWHVVMAIGGFLDPAV-LGPLP 280
Query: 86 DNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFG-DQYRNMVLLR 144
NV +W P +LAH R +THG +++EA + GVP++ VP F + + +
Sbjct: 281 PNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338
Query: 145 HRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
G + L S + + + D
Sbjct: 339 ELGLGSVLRPDQLEPASIREAVERLAADSA 368
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 8e-20
Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 8/141 (5%)
Query: 35 VYMSFGSVV-DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW 93
V +S G+ D + F + + DP LP NV +W
Sbjct: 250 VLVSLGTTFNDRPGFFRDC----ARAFDGQPWHVVMTLGGQVDPAA-LGDLPPNVEAHRW 304
Query: 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEP 153
P +L + +THGG+ +LMEA G P++ VP D + G + P
Sbjct: 305 VPHVKVLEQ--ATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLP 362
Query: 154 IQTLTKQSFLKNAQTMLNDPR 174
+ + L + DP
Sbjct: 363 GEKADGDTLLAAVGAVAADPA 383
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 1e-17
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
Query: 35 VYMSFGSVV-DPTKLSEETKLGFLEVFKQLK----LPIFWKIDITNDPVLNAKTLPDNVF 89
VY++ G+ ++ ++ L + +D++ +P NV
Sbjct: 245 VYLTLGTSSGGTVEVLRAA----IDGLAGLDADVLVASGPSLDVSGLG-----EVPANVR 295
Query: 90 IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYA 149
++ W PQ +L H + L + HGG + + A GVP L P+ GD + N + G
Sbjct: 296 LESWVPQAALLPH--VDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAG 353
Query: 150 LIEPIQTLTKQSFLKNAQTMLNDPR 174
++ S A+ +L +
Sbjct: 354 DHLLPDNISPDSVSGAAKRLLAEES 378
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 4e-17
Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 4/148 (2%)
Query: 27 ADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
D + V ++ G + + + L + I D + +PD
Sbjct: 262 HDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVAN--IPD 319
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
NV + P +L + HGG S A+ GVP + +P D +
Sbjct: 320 NVRTVGFVPMHALLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF 377
Query: 147 GYALIEPIQTLTKQSFLKNAQTMLNDPR 174
G + P+ LT ++ + +L+DP
Sbjct: 378 GAGIALPVPELTPDQLRESVKRVLDDPA 405
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 1e-16
Identities = 24/139 (17%), Positives = 39/139 (28%), Gaps = 9/139 (6%)
Query: 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWY 94
VY+ FGS+ P ++ + + I L + F
Sbjct: 241 VYLGFGSLGAPADAVRVA----IDAIRAHGRRV---ILSRGWADLVLPDDGADCFAIGEV 293
Query: 95 PQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154
+ + I HGG + A+ G P + +P DQ + G +
Sbjct: 294 NHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDG 351
Query: 155 QTLTKQSFLKNAQTMLNDP 173
T S T L
Sbjct: 352 PIPTFDSLSAALATALTPE 370
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 2e-16
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVL 142
LP+ V +P + I+ + + HGG + + S GVP + VP + + + L
Sbjct: 281 PLPEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARL 338
Query: 143 LRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
L G + P + +S L + +D
Sbjct: 339 LHAAGAGVEVPWEQAGVESVLAACARIRDDSS 370
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 2e-16
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 9/138 (6%)
Query: 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWY 94
VY+ FGS P + + +E + + + + L D+ +
Sbjct: 224 VYVGFGSGPAPAEAARVA----IEAVRAQGRRV---VLSSGWAGLGRIDEGDDCLVVGEV 276
Query: 95 PQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154
+ + + HGG + + G P + VP DQ + G +
Sbjct: 277 NHQVLF--GRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDG 334
Query: 155 QTLTKQSFLKNAQTMLND 172
T T +S T L
Sbjct: 335 PTPTVESLSAALATALTP 352
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 5e-16
Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 6/150 (4%)
Query: 27 ADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
A V + G +V + + + + +L LPD
Sbjct: 213 AARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTD--LPD 270
Query: 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
N I + P L L I GG + A+ LG+P L +P + DQ+ L
Sbjct: 271 NARIAESVPLNLFLRT--CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA 328
Query: 147 GYALIEPIQ--TLTKQSFLKNAQTMLNDPR 174
G + P + + F + T+L D
Sbjct: 329 GAGICLPDEQAQSDHEQFTDSIATVLGDTG 358
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 2e-14
Identities = 26/141 (18%), Positives = 43/141 (30%), Gaps = 11/141 (7%)
Query: 35 VYMSFGSVV--DPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK 92
V++ FGS ++ +E + + I L D+ F
Sbjct: 240 VHIGFGSSSGRGIADAAKV----AVEAIRAQGRRV---ILSRGWTELVLPDDRDDCFAID 292
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIE 152
+ + I HG + A+ GVP L +P DQ + G +
Sbjct: 293 EVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350
Query: 153 PIQTLTKQSFLKNAQTMLNDP 173
T T +S T+L
Sbjct: 351 DGPTPTFESLSAALTTVLAPE 371
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 3e-14
Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 7/142 (4%)
Query: 35 VYMSFGSVVDPTKLSEETKL--GFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQK 92
V ++ GS V G + + + + T L + +
Sbjct: 213 VLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEAL--RAEVPQARVG- 269
Query: 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIE 152
W P + L + H G S + S GVP L +P + G A+
Sbjct: 270 WTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL 327
Query: 153 PIQTLTKQSFLKNAQTMLNDPR 174
+ ++ + Q +
Sbjct: 328 LPGEDSTEAIADSCQELQAKDT 349
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 8e-14
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM-- 140
TLP NV W P +L + HGG ++M A G+P L P DQ+++
Sbjct: 280 TLPRNVRAVGWTPLHTLLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAR 337
Query: 141 VLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
+ RG L+ + + ++ D
Sbjct: 338 EAVSRRGIGLVSTSDKVDADL----LRRLIGDES 367
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-13
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 32/127 (25%)
Query: 35 VYMSFGSVVDPTK--LSE------ETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
VY+SFGSVV P L+ E F+ F+ DP + LP
Sbjct: 276 VYISFGSVVTPPPHELTALAESLEECGFPFIWSFR-------------GDP---KEKLPK 319
Query: 87 NV--------FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYR 138
I W PQ +IL H ++ +F+TH G +S++E GVP++ PFFGDQ
Sbjct: 320 GFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGL 379
Query: 139 NMVLLRH 145
N +L
Sbjct: 380 NTILTES 386
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 2e-13
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 32/127 (25%)
Query: 35 VYMSFGSVVDPTK--LSE------ETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
VY+SFG+V P + +++ F+ + + LP+
Sbjct: 274 VYISFGTVTTPPPAEVVALSEALEASRVPFIWSLR-------------DKAR---VHLPE 317
Query: 87 NV--------FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYR 138
+ W PQ ++LAH + F+TH G +SL E+ + GVP++ PFFGDQ
Sbjct: 318 GFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL 377
Query: 139 NMVLLRH 145
N ++
Sbjct: 378 NGRMVED 384
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-13
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 32/123 (26%)
Query: 35 VYMSFGS--VVDPTKLSE------ETKLGFLEVFKQLKLPIFWKI--DITNDPVLNAKTL 84
VY++FGS V+ P +L E K FL W I D+ +
Sbjct: 298 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFL-----------WIIRPDLVIG---GSVIF 343
Query: 85 PDNV--------FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQ 136
I W PQ +L HP++ F+TH G +S E+ GVP+L PFF DQ
Sbjct: 344 SSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ 403
Query: 137 YRN 139
+
Sbjct: 404 PTD 406
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-11
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 35 VYMSFGS--VVDPTKLSE------ETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPD 86
+Y+SFGS + +L+E +++ FL V + ++ LP
Sbjct: 271 LYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPP 330
Query: 87 NVF----------IQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQ 136
F I W PQ +LAHP+ F+TH G +S +E+ G+P++ P + +Q
Sbjct: 331 G-FLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389
Query: 137 YRNMVLL 143
N VLL
Sbjct: 390 KMNAVLL 396
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 2e-10
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 89 FIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL 143
I W PQ ++LAH + F++H G +S++E+ GVP+L P + +Q N L
Sbjct: 335 MICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Length = 224 | Back alignment and structure |
|---|
Score = 39.8 bits (92), Expect = 2e-04
Identities = 17/117 (14%), Positives = 33/117 (28%), Gaps = 4/117 (3%)
Query: 56 FLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGIS 115
+ K+PI V + + + L I+H G
Sbjct: 84 RGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTG 143
Query: 116 SLMEASSLGVPVLGVPFF----GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQT 168
S++++ L P++ Q + GY + L+ +QT
Sbjct: 144 SILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETGLIAGLRASQT 200
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 38.7 bits (89), Expect = 5e-04
Identities = 27/177 (15%), Positives = 49/177 (27%), Gaps = 51/177 (28%)
Query: 5 LNRAVKLCSMCFIDGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK 64
L ++ ++ L + R ++ +
Sbjct: 355 LTTIIESS----LNVLEPAEYRK-------MFDRLSVFPPSAHIPTIL------------ 391
Query: 65 LPIFWKIDITNDPVLNAKTLPDNVFIQKWYP---------QTDILAHPNL-----RLFIT 110
L + W I +D ++ L ++K ++ R +
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 111 HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYAL--IEPIQ--TLTKQSFL 163
H I ++ L P L DQY H G+ L IE + TL + FL
Sbjct: 452 HYNIPKTFDSDDLIPPYL------DQY----FYSHIGHHLKNIEHPERMTLFRMVFL 498
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 174 | |||
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 99.98 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 99.97 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.97 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 99.97 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 99.97 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.96 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.95 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.95 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.95 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.94 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.93 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.93 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.92 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.92 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.9 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.9 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.88 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.87 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.86 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.84 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.82 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.67 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.38 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.68 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.55 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 98.5 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.47 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.38 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 98.32 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.32 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 98.31 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 98.3 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 98.2 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 98.17 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 98.09 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 98.08 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.05 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 97.98 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 97.98 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 97.9 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 97.86 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.85 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 97.81 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 97.78 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 97.77 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.73 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.69 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 97.67 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 97.59 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 97.5 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 96.5 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 96.27 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 95.93 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 95.88 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 95.71 | |
| 1rcu_A | 195 | Conserved hypothetical protein VT76; structural ge | 95.02 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 94.94 | |
| 1ydh_A | 216 | AT5G11950; structural genomics, protein structure | 94.06 | |
| 1wek_A | 217 | Hypothetical protein TT1465; rossman fold, structu | 93.23 | |
| 3sbx_A | 189 | Putative uncharacterized protein; structural genom | 93.07 | |
| 3qua_A | 199 | Putative uncharacterized protein; structural genom | 91.56 | |
| 1t35_A | 191 | Hypothetical protein YVDD, putative lysine decarbo | 91.24 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 90.87 | |
| 2i2c_A | 272 | Probable inorganic polyphosphate/ATP-NAD kinase 1; | 88.39 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 88.29 | |
| 2a33_A | 215 | Hypothetical protein; structural genomics, protein | 86.72 | |
| 1yt5_A | 258 | Inorganic polyphosphate/ATP-NAD kinase; domain 1: | 84.34 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 82.56 |
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=219.37 Aligned_cols=162 Identities=24% Similarity=0.338 Sum_probs=135.4
Q ss_pred CccccCCccccC--------ChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC-
Q psy16939 7 RAVKLCSMCFID--------GLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND- 76 (174)
Q Consensus 7 ~~~~~~g~~~~~--------~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~- 76 (174)
..+..+||+... .++++.+|++..+ +++|||++||... .+.+.+.+++++|+..+++|||+++....
T Consensus 234 ~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~---~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 310 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQLNELALGLADSEQRFLWVIRSPSGI 310 (480)
T ss_dssp CCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred CcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccC---CCHHHHHHHHHHHHhcCCcEEEEECCcccc
Confidence 357778887542 3457899999876 8999999999975 57889999999999999999999976421
Q ss_pred -----------ccccccCCCCCE--------EEe-ecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchH
Q psy16939 77 -----------PVLNAKTLPDNV--------FIQ-KWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQ 136 (174)
Q Consensus 77 -----------~~~~~~~~~~nv--------~~~-~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ 136 (174)
..+.. .+|+|+ .++ +|+||.++|.|+++++||||||+||++|++++|||+|++|+++||
T Consensus 311 ~~~~~~~~~~~~~~~~-~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 311 ANSSYFDSHSQTDPLT-FLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp TTTTTTCC--CSCGGG-GSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred ccccccccccccchhh-hcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 11111 356664 444 599999999998889999999999999999999999999999999
Q ss_pred HHHHHHH-HHcCceeEecCC---CCCHHHHHHHHHHhhcC
Q psy16939 137 YRNMVLL-RHRGYALIEPIQ---TLTKQSFLKNAQTMLND 172 (174)
Q Consensus 137 ~~na~~l-~~~G~g~~l~~~---~~~~~~l~~al~~ll~~ 172 (174)
+.||+++ +++|+|+.+... .++.++|.++|+++|++
T Consensus 390 ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~ 429 (480)
T 2vch_A 390 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcC
Confidence 9999997 689999999765 68999999999999974
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=218.97 Aligned_cols=162 Identities=23% Similarity=0.349 Sum_probs=138.1
Q ss_pred ccccCCccccC-----Ch--HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---C
Q psy16939 8 AVKLCSMCFID-----GL--SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---D 76 (174)
Q Consensus 8 ~~~~~g~~~~~-----~~--~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---~ 76 (174)
.+..+||+... .+ .++.+|++..+ +++|||++||... .+.+.+.+++++++..+++|+|+++... +
T Consensus 239 ~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l 315 (456)
T 2c1x_A 239 TYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHL 315 (456)
T ss_dssp CEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGS
T ss_pred CEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCcccc---CCHHHHHHHHHHHHhcCCeEEEEECCcchhhC
Confidence 56677877532 12 34789999876 8999999999986 4678899999999999999999998653 2
Q ss_pred cc-ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc-CceeEecC
Q psy16939 77 PV-LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR-GYALIEPI 154 (174)
Q Consensus 77 ~~-~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~-G~g~~l~~ 154 (174)
++ +.+ ..++|+++.+|+||.++|.|+++|+||||||+||++|++++|+|+|++|+++||+.||+++++. |+|+.++.
T Consensus 316 ~~~~~~-~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~ 394 (456)
T 2c1x_A 316 PEGFLE-KTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG 394 (456)
T ss_dssp CTTHHH-HHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG
T ss_pred CHHHHh-hcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC
Confidence 21 111 2357899999999999999999999999999999999999999999999999999999999998 99999987
Q ss_pred CCCCHHHHHHHHHHhhcCC
Q psy16939 155 QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~~ 173 (174)
.+++.++|.++++++|+|+
T Consensus 395 ~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 395 GVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp GSCCHHHHHHHHHHHHHSH
T ss_pred CCcCHHHHHHHHHHHHCCC
Confidence 7889999999999999874
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-32 Score=218.89 Aligned_cols=162 Identities=26% Similarity=0.376 Sum_probs=139.6
Q ss_pred ccccCCcccc-------CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC---C
Q psy16939 8 AVKLCSMCFI-------DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN---D 76 (174)
Q Consensus 8 ~~~~~g~~~~-------~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~---~ 76 (174)
.+..+||... ..++++.+|++..+ +++|||++||... ++.+.+.+++++|+..+++|||++++.. +
T Consensus 241 ~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~---~~~~~~~el~~~l~~~~~~flw~~~~~~~~~l 317 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVT---PPPHELTALAESLEECGFPFIWSFRGDPKEKL 317 (454)
T ss_dssp CEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHCCCEEEECCSCHHHHS
T ss_pred CEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCc---CCHHHHHHHHHHHHhCCCeEEEEeCCcchhcC
Confidence 5566777542 11457999999876 8999999999986 5788899999999999999999998743 2
Q ss_pred cc-ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecC
Q psy16939 77 PV-LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPI 154 (174)
Q Consensus 77 ~~-~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~ 154 (174)
++ +.+ ..++|+++.+|+||.++|.|+++++||||||+||+.|++++|+|+|++|+++||+.||+++++ .|+|+.++.
T Consensus 318 p~~~~~-~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~ 396 (454)
T 3hbf_A 318 PKGFLE-RTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN 396 (454)
T ss_dssp CTTHHH-HTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG
T ss_pred CHhHHh-hcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC
Confidence 22 222 346799999999999999998888999999999999999999999999999999999999999 599999988
Q ss_pred CCCCHHHHHHHHHHhhcCC
Q psy16939 155 QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 155 ~~~~~~~l~~al~~ll~~~ 173 (174)
..++.++|.++++++|+++
T Consensus 397 ~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 397 GVLTKESIKKALELTMSSE 415 (454)
T ss_dssp GSCCHHHHHHHHHHHHSSH
T ss_pred CCCCHHHHHHHHHHHHCCC
Confidence 7899999999999999764
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=185.80 Aligned_cols=149 Identities=32% Similarity=0.587 Sum_probs=134.4
Q ss_pred CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCc
Q psy16939 18 DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 18 ~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 96 (174)
++|+++.+|++..+ +++|||++||... ..+.+.+..+++++++.+++++|.+++.... ..++|+.+.+|+|+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~--~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-----~~~~~v~~~~~~~~ 78 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVS--NMTEERANVIASALAQIPQKVLWRFDGNKPD-----TLGLNTRLYKWIPQ 78 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCT--TCCHHHHHHHHHHHTTSSSEEEEECCSSCCT-----TCCTTEEEESSCCH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcc--cCCHHHHHHHHHHHHhCCCeEEEEECCcCcc-----cCCCcEEEecCCCH
Confidence 57899999998765 7899999999964 2478889999999998889999998865443 56789999999999
Q ss_pred hhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 97 TDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 97 ~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
.+++.|++||++|||||++|++|++++|+|+|++|...||..||.++++.|+|+.++.++++.++|.++++++++|+
T Consensus 79 ~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH
Confidence 99998889999999999999999999999999999999999999999999999999888889999999999999774
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=212.00 Aligned_cols=163 Identities=19% Similarity=0.284 Sum_probs=137.5
Q ss_pred CccccCCccccCC-----------hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC
Q psy16939 7 RAVKLCSMCFIDG-----------LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT 74 (174)
Q Consensus 7 ~~~~~~g~~~~~~-----------~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~ 74 (174)
..+..+||+.... +.++.+|++..+ +++|||++||... .++.+.+.+++++|+..+++|||+++..
T Consensus 239 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 316 (463)
T 2acv_A 239 PPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAE 316 (463)
T ss_dssp CCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred CcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccc--cCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4577788876421 247889999876 8999999999982 1578889999999999999999999864
Q ss_pred --CCcc-ccccCC--CCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHH-HHcCc
Q psy16939 75 --NDPV-LNAKTL--PDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL-RHRGY 148 (174)
Q Consensus 75 --~~~~-~~~~~~--~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l-~~~G~ 148 (174)
.+++ +.+ .. ++|+++.+|+||.++|.|+++++||||||+||++|++++|+|+|++|+++||+.||+++ +++|+
T Consensus 317 ~~~l~~~~~~-~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~ 395 (463)
T 2acv_A 317 KKVFPEGFLE-WMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGV 395 (463)
T ss_dssp GGGSCTTHHH-HHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCC
T ss_pred cccCChhHHH-hhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCe
Confidence 2322 211 22 57899999999999999999999999999999999999999999999999999999995 89999
Q ss_pred eeEe-c---CC--CCCHHHHHHHHHHhhcC
Q psy16939 149 ALIE-P---IQ--TLTKQSFLKNAQTMLND 172 (174)
Q Consensus 149 g~~l-~---~~--~~~~~~l~~al~~ll~~ 172 (174)
|+.+ + .+ .++.++|.++|+++|++
T Consensus 396 g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~ 425 (463)
T 2acv_A 396 GLGLRVDYRKGSDVVAAEEIEKGLKDLMDK 425 (463)
T ss_dssp EEESCSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred EEEEecccCCCCccccHHHHHHHHHHHHhc
Confidence 9999 3 34 68999999999999963
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=215.88 Aligned_cols=147 Identities=24% Similarity=0.422 Sum_probs=129.5
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-------Ccc-ccccCCCCCEEEee
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-------DPV-LNAKTLPDNVFIQK 92 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-------~~~-~~~~~~~~nv~~~~ 92 (174)
++.+|++..+ +++|||++||... .+.+.+.+++++|+..+++|+|+++... +++ +.+ ..++|+++.+
T Consensus 284 ~~~~wld~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~v~~ 359 (482)
T 2pq6_A 284 ECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTN-EIADRGLIAS 359 (482)
T ss_dssp HHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHH-HHTTTEEEES
T ss_pred HHHHHHhcCCCCceEEEecCCccc---CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHH-hcCCCEEEEe
Confidence 4789999876 8999999999875 5677799999999999999999987532 221 211 2467999999
Q ss_pred cCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHH-HcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLR-HRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~-~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||++++ ++|+|+.++ ++++.++|.++|+++|+
T Consensus 360 ~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~ 438 (482)
T 2pq6_A 360 WCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIA 438 (482)
T ss_dssp CCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHT
T ss_pred ecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999997 699999997 67899999999999998
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
|+
T Consensus 439 ~~ 440 (482)
T 2pq6_A 439 GD 440 (482)
T ss_dssp SH
T ss_pred CC
Confidence 75
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=191.35 Aligned_cols=155 Identities=16% Similarity=0.119 Sum_probs=135.5
Q ss_pred CccccCCcccc----CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcccccc
Q psy16939 7 RAVKLCSMCFI----DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAK 82 (174)
Q Consensus 7 ~~~~~~g~~~~----~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~ 82 (174)
.++.++|++.. .+++++.+|++.. +++|||++||... +.+.+..+++++++.+.+++|..+.......
T Consensus 193 ~~~~~~G~~~~~~~~~~~~~l~~~l~~~-~~~Vlv~~Gs~~~----~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~--- 264 (404)
T 3h4t_A 193 LGTVQTGAWILPDQRPLSAELEGFLRAG-SPPVYVGFGSGPA----PAEAARVAIEAVRAQGRRVVLSSGWAGLGRI--- 264 (404)
T ss_dssp CSCCBCCCCCCCCCCCCCHHHHHHHHTS-SCCEEECCTTSCC----CTTHHHHHHHHHHHTTCCEEEECTTTTCCCS---
T ss_pred CCeEEeCccccCCCCCCCHHHHHHHhcC-CCeEEEECCCCCC----cHHHHHHHHHHHHhCCCEEEEEeCCcccccc---
Confidence 35667776643 4678899998754 5899999999974 5667999999999999999999886544321
Q ss_pred CCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy16939 83 TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162 (174)
Q Consensus 83 ~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l 162 (174)
..++|+++.+|+|+.++| +.+|++|||||+||+.|++++|+|+|++|..+||+.||.++++.|+|+.+..++++.++|
T Consensus 265 ~~~~~v~~~~~~~~~~ll--~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 342 (404)
T 3h4t_A 265 DEGDDCLVVGEVNHQVLF--GRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESL 342 (404)
T ss_dssp SCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHH
T ss_pred cCCCCEEEecCCCHHHHH--hhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHH
Confidence 457899999999999999 789999999999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHhhc
Q psy16939 163 LKNAQTMLN 171 (174)
Q Consensus 163 ~~al~~ll~ 171 (174)
.++++++++
T Consensus 343 ~~ai~~ll~ 351 (404)
T 3h4t_A 343 SAALATALT 351 (404)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhC
Confidence 999999986
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-28 Score=193.40 Aligned_cols=157 Identities=17% Similarity=0.099 Sum_probs=135.0
Q ss_pred ccccCCccccC----ChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 8 AVKLCSMCFID----GLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 8 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
.+.++||+..+ .++++.+|++..+ ++|||++||... ....+.+.+++++++..+.+++|+++...... ..
T Consensus 210 ~~~~vG~~~~~~~~~~~~~~~~~l~~~~-~~v~v~~Gs~~~--~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~---~~ 283 (416)
T 1rrv_A 210 DAVQTGAWLLSDERPLPPELEAFLAAGS-PPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVL---PD 283 (416)
T ss_dssp CCEECCCCCCCCCCCCCHHHHHHHHSSS-CCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCC---SC
T ss_pred CeeeECCCccCccCCCCHHHHHHHhcCC-CeEEEecCCCCc--cChHHHHHHHHHHHHHCCCeEEEEeCCccccc---cC
Confidence 45677877653 5678999997664 899999999853 12567889999999999999999988654321 15
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+.+.+|+|+.++| ++||++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.++.++.+.++|.
T Consensus 284 ~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 361 (416)
T 1rrv_A 284 DRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLS 361 (416)
T ss_dssp CCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHH
T ss_pred CCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHH
Confidence 67899999999999999 8899999999999999999999999999999999999999999999999987788999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++ +|+
T Consensus 362 ~~i~~l-~~~ 370 (416)
T 1rrv_A 362 AALTTV-LAP 370 (416)
T ss_dssp HHHHHH-TSH
T ss_pred HHHHHh-hCH
Confidence 999998 664
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=191.59 Aligned_cols=155 Identities=15% Similarity=0.119 Sum_probs=132.0
Q ss_pred ccccCCcccc----CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 8 AVKLCSMCFI----DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 8 ~~~~~g~~~~----~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
.+.++||+.. +.++++.+|++..+ ++|||++||.. .+.+.++.++++++..+.+++|+++...... ..
T Consensus 211 ~~~~vG~~~~~~~~~~~~~~~~~l~~~~-~~v~v~~Gs~~----~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~---~~ 282 (415)
T 1iir_A 211 DAVQTGAWILPDERPLSPELAAFLDAGP-PPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVL---PD 282 (415)
T ss_dssp CCEECCCCCCCCCCCCCHHHHHHHHTSS-CCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCC---SS
T ss_pred CeEeeCCCccCcccCCCHHHHHHHhhCC-CeEEEeCCCCC----CcHHHHHHHHHHHHHCCCeEEEEeCCCcccc---cC
Confidence 4667787765 35678999997654 89999999985 2688899999999999999999887644321 14
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+.+.+|+|+.++| ++||++|||||+||++|++++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.
T Consensus 283 ~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 360 (415)
T 1iir_A 283 DGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLS 360 (415)
T ss_dssp CGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred CCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHH
Confidence 67899999999999998 8899999999999999999999999999999999999999999999999987788999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++ +|+
T Consensus 361 ~~i~~l-~~~ 369 (415)
T 1iir_A 361 AALATA-LTP 369 (415)
T ss_dssp HHHHHH-TSH
T ss_pred HHHHHH-cCH
Confidence 999998 663
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=188.93 Aligned_cols=162 Identities=23% Similarity=0.322 Sum_probs=133.8
Q ss_pred ccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 5 LNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
++..+.++||+.... .+..+|+...+ +++|||++||... ...+.+.+++++++..+.+++|.++.....+... .
T Consensus 228 ~~~~~~~vGp~~~~~-~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~-~ 302 (424)
T 2iya_A 228 VGDNYTFVGPTYGDR-SHQGTWEGPGDGRPVLLIALGSAFT---DHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLG-E 302 (424)
T ss_dssp CCTTEEECCCCCCCC-GGGCCCCCCCSSCCEEEEECCSSSC---CCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGC-S
T ss_pred CCCCEEEeCCCCCCc-ccCCCCCccCCCCCEEEEEcCCCCc---chHHHHHHHHHHHhcCCcEEEEEECCcCChHHhc-c
Confidence 455677888875432 22345665444 7999999999974 4678899999999888889999887643221111 4
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+.+.+|+|+.++| +.+|++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.+..++++.++|.
T Consensus 303 ~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 380 (424)
T 2iya_A 303 VPPNVEVHQWVPQLDIL--TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLR 380 (424)
T ss_dssp CCTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred CCCCeEEecCCCHHHHH--hhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHH
Confidence 67899999999999999 6699999999999999999999999999999999999999999999999987778999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++++|+
T Consensus 381 ~~i~~ll~~~ 390 (424)
T 2iya_A 381 EAVLAVASDP 390 (424)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHcCH
Confidence 9999999874
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=185.30 Aligned_cols=144 Identities=20% Similarity=0.264 Sum_probs=114.9
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
....+|++..+ +++|||++||..... ...+.+.++++++++.+.+++|..++...... ...++|+++.+|+||.++
T Consensus 225 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~--~~~~~~v~~~~~~p~~~l 301 (400)
T 4amg_A 225 AVLPDWLPPAAGRRRIAVTLGSIDALS-GGIAKLAPLFSEVADVDAEFVLTLGGGDLALL--GELPANVRVVEWIPLGAL 301 (400)
T ss_dssp EECCTTCSCCTTCCEEEECCCSCC--C-CSSSTTHHHHHHGGGSSSEEEEECCTTCCCCC--CCCCTTEEEECCCCHHHH
T ss_pred ccCcccccccCCCcEEEEeCCcccccC-ccHHHHHHHHHHhhccCceEEEEecCcccccc--ccCCCCEEEEeecCHHHH
Confidence 34456777666 899999999986532 12356788899999999999999877543321 157899999999999999
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
| +.+|+||||||+||++|++++|+|+|++|.++||+.||+++++.|+|+.++..+.+.+. |+++|+|+
T Consensus 302 L--~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~a----l~~lL~d~ 369 (400)
T 4amg_A 302 L--ETCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAEQ----CRRLLDDA 369 (400)
T ss_dssp H--TTCSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHHH----HHHHHHCH
T ss_pred h--hhhhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHHH----HHHHHcCH
Confidence 9 66999999999999999999999999999999999999999999999999887777654 55566553
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=180.22 Aligned_cols=162 Identities=22% Similarity=0.314 Sum_probs=134.2
Q ss_pred ccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 5 LNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
++..+.++||+.... .+..+|....+ +++|||++||... ...+.+..+++++++.+.+++|.++.....+..+ .
T Consensus 220 ~~~~~~~vGp~~~~~-~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~-~ 294 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDR-RFLGEWTRPADDLPVVLVSLGTTFN---DRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALG-D 294 (415)
T ss_dssp CCTTEEECCCCCCCC-GGGCCCCCCSSCCCEEEEECTTTSC---CCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGC-C
T ss_pred CCCceEEeCCCCCCc-ccCcCccccCCCCCEEEEECCCCCC---ChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhc-C
Confidence 455677888876542 23344544334 7999999999865 3567899999999998989999888642221111 4
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
.++|+++.+|+|+.++| +.||++|||||++|++|++++|+|+|++|...||..||.++++.|+|+.+..++++.++|.
T Consensus 295 ~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~ 372 (415)
T 3rsc_A 295 LPPNVEAHRWVPHVKVL--EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLL 372 (415)
T ss_dssp CCTTEEEESCCCHHHHH--HHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHH
T ss_pred CCCcEEEEecCCHHHHH--hhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHH
Confidence 67899999999999999 6699999999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHhhcCC
Q psy16939 164 KNAQTMLNDP 173 (174)
Q Consensus 164 ~al~~ll~~~ 173 (174)
++++++++|+
T Consensus 373 ~~i~~ll~~~ 382 (415)
T 3rsc_A 373 AAVGAVAADP 382 (415)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHHcCH
Confidence 9999999875
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=185.09 Aligned_cols=150 Identities=20% Similarity=0.244 Sum_probs=121.1
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
+.++.+|++..+ +++|||++||.........+.+..++++++..+++++|..++....++. ..++|+++.+|+|+.+
T Consensus 254 ~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~--~~~~~v~~~~~~~~~~ 331 (441)
T 2yjn_A 254 PSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVA--NIPDNVRTVGFVPMHA 331 (441)
T ss_dssp SCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS--SCCSSEEECCSCCHHH
T ss_pred CcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhc--cCCCCEEEecCCCHHH
Confidence 345677887544 7899999999875200023457778888888889999988865443221 3578999999999999
Q ss_pred hhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 99 ILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 99 ~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+| ++||++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.+..++++.++|.++|+++++|+
T Consensus 332 ll--~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 404 (441)
T 2yjn_A 332 LL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP 404 (441)
T ss_dssp HG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred HH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH
Confidence 88 88999999999999999999999999999999999999999999999999888889999999999999874
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=173.33 Aligned_cols=162 Identities=18% Similarity=0.250 Sum_probs=132.4
Q ss_pred ccCccccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 5 LNRAVKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
++..++++||+.... .+...|....+ +++|++++||... ...+.+..++++++..+.++++.+++....+... .
T Consensus 204 ~~~~~~~vGp~~~~~-~~~~~~~~~~~~~~~v~v~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~ 278 (402)
T 3ia7_A 204 FDERFAFVGPTLTGR-DGQPGWQPPRPDAPVLLVSLGNQFN---EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLG-P 278 (402)
T ss_dssp CCTTEEECCCCCCC-----CCCCCSSTTCCEEEEECCSCSS---CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGC-S
T ss_pred CCCCeEEeCCCCCCc-ccCCCCcccCCCCCEEEEECCCCCc---chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhC-C
Confidence 455677888776432 23344544334 7999999999976 3567899999999988889999887643222111 4
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccc-cchHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPF-FGDQYRNMVLLRHRGYALIEPIQTLTKQSF 162 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~-~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l 162 (174)
.++|+++.+|+|+.++| +.||++|||||++|++|++++|+|+|++|. ..||..||.++++.|+|+.+..++++.++|
T Consensus 279 ~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 356 (402)
T 3ia7_A 279 LPPNVEAHQWIPFHSVL--AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASI 356 (402)
T ss_dssp CCTTEEEESCCCHHHHH--TTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHH
T ss_pred CCCcEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHH
Confidence 67899999999999999 679999999999999999999999999999 999999999999999999998878899999
Q ss_pred HHHHHHhhcCC
Q psy16939 163 LKNAQTMLNDP 173 (174)
Q Consensus 163 ~~al~~ll~~~ 173 (174)
.++++++++|+
T Consensus 357 ~~~~~~ll~~~ 367 (402)
T 3ia7_A 357 REAVERLAADS 367 (402)
T ss_dssp HHHHHHHHHCH
T ss_pred HHHHHHHHcCH
Confidence 99999999875
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=175.47 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=123.7
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCC--CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKL--SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT 97 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~--~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 97 (174)
.++.+|++..+ +++|||++||......+ +.+.+..+++++++.+.+++|..++....++. ..++|+.+ +|+|+.
T Consensus 198 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~--~~~~~v~~-~~~~~~ 274 (384)
T 2p6p_A 198 CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALR--AEVPQARV-GWTPLD 274 (384)
T ss_dssp CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHH--HHCTTSEE-ECCCHH
T ss_pred CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhC--CCCCceEE-cCCCHH
Confidence 45667887644 68999999998752001 33568889999998889999988753222111 24689999 999999
Q ss_pred hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 98 DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 98 ~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++| +.||++|||||++|++||+++|+|+|++|..+||..||.++++.|+|+.+..++.+.++|.++++++++|+
T Consensus 275 ~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 348 (384)
T 2p6p_A 275 VVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD 348 (384)
T ss_dssp HHG--GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH
T ss_pred HHH--hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH
Confidence 999 78999999999999999999999999999999999999999999999999877789999999999999874
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-24 Score=171.14 Aligned_cols=150 Identities=18% Similarity=0.304 Sum_probs=111.4
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCC-----CHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeec
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKL-----SEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW 93 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~-----~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~ 93 (174)
+.++.+|+...+ +++|||++|+....... ..+.+..+++++++.+.+++|..++.....+. ..++|+++.+|
T Consensus 214 ~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~--~~~~~v~~~~~ 291 (398)
T 4fzr_A 214 NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ--PLPEGVLAAGQ 291 (398)
T ss_dssp SCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC----------CCTTEEEESC
T ss_pred CCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhc--cCCCcEEEeCc
Confidence 345667777654 79999999999642110 23458889999998899999988765432211 46889999999
Q ss_pred CCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 94 ~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|+.++| +.||++|||||++|++||+++|+|+|++|...||..|+.++++.|+|+.+..++++.++|.++++++++|+
T Consensus 292 ~~~~~ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~ 369 (398)
T 4fzr_A 292 FPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDS 369 (398)
T ss_dssp CCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCT
T ss_pred CCHHHHH--hhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence 9999999 66999999999999999999999999999999999999999999999999888888999999999999876
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-23 Score=166.27 Aligned_cols=158 Identities=25% Similarity=0.351 Sum_probs=123.3
Q ss_pred cccCCccccCChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCC
Q psy16939 9 VKLCSMCFIDGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPD 86 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~ 86 (174)
+.++||+.... .+..+|....+ +++||+++||... ...+.+.+++++++.. +.+++|.++.....+..+ ..++
T Consensus 209 v~~vG~~~~~~-~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~-~~~~ 283 (430)
T 2iyf_A 209 YTFVGACQGDR-AEEGGWQRPAGAEKVVLVSLGSAFT---KQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELG-ELPD 283 (430)
T ss_dssp EEECCCCC------CCCCCCCTTCSEEEEEECTTTCC----CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGC-SCCT
T ss_pred EEEeCCcCCCC-CCCCCCccccCCCCeEEEEcCCCCC---CcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhc-cCCC
Confidence 66677643211 11123443333 6899999999973 4678899999999886 778888887543221111 4578
Q ss_pred CEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy16939 87 NVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNA 166 (174)
Q Consensus 87 nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al 166 (174)
|+.+.+|+|+.++| +.+|++|+|||++|+.||+++|+|+|++|..+||..|++++++.|+|+.+..++++.++|.+++
T Consensus 284 ~v~~~~~~~~~~~l--~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i 361 (430)
T 2iyf_A 284 NVEVHDWVPQLAIL--RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETA 361 (430)
T ss_dssp TEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHH
T ss_pred CeEEEecCCHHHHh--hccCEEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHH
Confidence 99999999999988 6799999999999999999999999999999999999999999999999987778999999999
Q ss_pred HHhhcCC
Q psy16939 167 QTMLNDP 173 (174)
Q Consensus 167 ~~ll~~~ 173 (174)
+++++|+
T Consensus 362 ~~ll~~~ 368 (430)
T 2iyf_A 362 LALVDDP 368 (430)
T ss_dssp HHHHHCH
T ss_pred HHHHcCH
Confidence 9999774
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=161.27 Aligned_cols=147 Identities=22% Similarity=0.277 Sum_probs=122.3
Q ss_pred HHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 22 DLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 22 ~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
....|+...+ +++|++++||.......+.+.+..++++ ++. +.+++|..++.....+ . ..++|+++.+|+|+.++
T Consensus 207 ~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l-~-~~~~~v~~~~~~~~~~l 283 (391)
T 3tsa_A 207 AFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALL-T-DLPDNARIAESVPLNLF 283 (391)
T ss_dssp ECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGC-T-TCCTTEEECCSCCGGGT
T ss_pred CCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhc-c-cCCCCEEEeccCCHHHH
Confidence 3445665544 7899999999843111237778888988 888 6789998876432221 1 46789999999999999
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecC--CCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI--QTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~--~~~~~~~l~~al~~ll~~~ 173 (174)
+ +.||++|||||.+|++||+++|+|+|++|...||..|+.++++.|+|+.+.. ++.+.+.|.++++++++|+
T Consensus 284 l--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~ 357 (391)
T 3tsa_A 284 L--RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDT 357 (391)
T ss_dssp G--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCT
T ss_pred H--hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCH
Confidence 9 8899999999999999999999999999999999999999999999999987 6678999999999999886
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-23 Score=163.14 Aligned_cols=138 Identities=20% Similarity=0.273 Sum_probs=114.3
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
....+|+...+ +++||+++||..... ...+.+.++++++++.+.+++|..++.....+ + ..++|+.+.+|+|+.++
T Consensus 220 ~~~~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l-~-~~~~~v~~~~~~~~~~l 296 (398)
T 3oti_A 220 AVLGDRLPPVPARPEVAITMGTIELQA-FGIGAVEPIIAAAGEVDADFVLALGDLDISPL-G-TLPRNVRAVGWTPLHTL 296 (398)
T ss_dssp EECCSSCCCCCSSCEEEECCTTTHHHH-HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGG-C-SCCTTEEEESSCCHHHH
T ss_pred cCCchhhhcCCCCCEEEEEcCCCcccc-CcHHHHHHHHHHHHcCCCEEEEEECCcChhhh-c-cCCCcEEEEccCCHHHH
Confidence 34445655444 789999999995310 13456888999999888999999887653322 1 46889999999999999
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHH--HHHHHcCceeEecCCCCCHHHHH
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNM--VLLRHRGYALIEPIQTLTKQSFL 163 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na--~~l~~~G~g~~l~~~~~~~~~l~ 163 (174)
| +.||++|||||++|++||+++|+|+|++|...||..|+ .++++.|+|+.++.++.+.+.|.
T Consensus 297 l--~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~ 360 (398)
T 3oti_A 297 L--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR 360 (398)
T ss_dssp H--TTCSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH
T ss_pred H--hhCCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH
Confidence 9 66999999999999999999999999999999999999 99999999999987777877776
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=152.68 Aligned_cols=136 Identities=23% Similarity=0.377 Sum_probs=119.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcCCCccEEEec
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAHPNLRLFITH 111 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~h 111 (174)
+++|++++|+... ...+.+.++++++.+.+.+++|..++....+..+ ..++|+.+.+|+|..++| +.||++|+|
T Consensus 242 ~~~vlv~~G~~~~---~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~-~~~~~v~~~~~~~~~~~l--~~ad~~v~~ 315 (412)
T 3otg_A 242 RPLVYLTLGTSSG---GTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLG-EVPANVRLESWVPQAALL--PHVDLVVHH 315 (412)
T ss_dssp SCEEEEECTTTTC---SCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCC-CCCTTEEEESCCCHHHHG--GGCSEEEES
T ss_pred CCEEEEEcCCCCc---CcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhc-cCCCcEEEeCCCCHHHHH--hcCcEEEEC
Confidence 7899999999963 4688899999999988889999888754222111 467899999999988999 679999999
Q ss_pred CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 112 GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 112 gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||++|++||+++|+|+|++|...||..|+..+++.|.|..+..++.+.++|.+++.++++|+
T Consensus 316 ~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~ 377 (412)
T 3otg_A 316 GGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEE 377 (412)
T ss_dssp CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCH
T ss_pred CchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999887789999999999999875
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.3e-21 Score=141.15 Aligned_cols=128 Identities=14% Similarity=0.092 Sum_probs=97.1
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHH-----HHHhhCC-CcEEEEecCCCC---cccccc-------------------
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFL-----EVFKQLK-LPIFWKIDITND---PVLNAK------------------- 82 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~-----~~l~~~~-~~~i~~~~~~~~---~~~~~~------------------- 82 (174)
+++.|||+.||... -++.+..++ ++|...+ .++++++|.... .++...
T Consensus 27 ~~~~VlVtgGS~~~----~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 27 EEKALFVTCGATVP----FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CSCCEEEECCSCCS----CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCEEEEEcCCchH----HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence 37999999999842 355555553 8888877 689999987554 110000
Q ss_pred --------CCCCCEEEeecCCch-hhhcCC-CccEEEecCChhhHHHHHHcCCCeEecccc----chHHHHHHHHHHcCc
Q psy16939 83 --------TLPDNVFIQKWYPQT-DILAHP-NLRLFITHGGISSLMEASSLGVPVLGVPFF----GDQYRNMVLLRHRGY 148 (174)
Q Consensus 83 --------~~~~nv~~~~~~p~~-~~l~~~-~~~~~I~hgG~~t~~eal~~g~P~i~vP~~----~dQ~~na~~l~~~G~ 148 (174)
...-++.+.+|++++ .++ + .||++|||||+||++|++++|+|+|++|.. .||..||+++++.|+
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSII--RDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHH--HHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred cccccccccCCceEEEeeccchHHHHH--HhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 011256778888877 566 8 899999999999999999999999999974 589999999999999
Q ss_pred eeEecCCCCCHHHHHHHHHHh
Q psy16939 149 ALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 149 g~~l~~~~~~~~~l~~al~~l 169 (174)
++.+ +.++|.++++++
T Consensus 181 ~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----CSCTTTHHHHHH
T ss_pred EEEc-----CHHHHHHHHHHH
Confidence 9887 345566666665
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-20 Score=148.09 Aligned_cols=135 Identities=17% Similarity=0.181 Sum_probs=108.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC----CcEEEEecCCCCccccc--cCCCCCEEEeecCCchh-hhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK----LPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQTD-ILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~----~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~~-~l~~~~ 104 (174)
++.++|..||.+. ....+.+.++++..+ ..+++++|....+...+ +..+.++.+.+|++++. +| +.
T Consensus 180 ~~~ilv~gGs~g~-----~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l--~~ 252 (365)
T 3s2u_A 180 RVNLLVLGGSLGA-----EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAY--AW 252 (365)
T ss_dssp CCEEEECCTTTTC-----SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHH--HH
T ss_pred CcEEEEECCcCCc-----cccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhh--cc
Confidence 6788898888864 344556667776654 35777777654322111 14567899999998875 66 78
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEecccc----chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGVPFF----GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~vP~~----~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
||++|||+|++|++|+++.|+|+|++|+. +||..||+.+++.|+|+.+..++++.++|.+++.++++|+
T Consensus 253 aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 253 ADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCT
T ss_pred ceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCH
Confidence 99999999999999999999999999873 6999999999999999999988999999999999999886
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.9e-16 Score=119.13 Aligned_cols=137 Identities=16% Similarity=0.111 Sum_probs=103.1
Q ss_pred cccCCccccCChHHHHHHHhcC-C-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCC--cccccc-C
Q psy16939 9 VKLCSMCFIDGLSDLQQRADAA-K-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITND--PVLNAK-T 83 (174)
Q Consensus 9 ~~~~g~~~~~~~~~~~~~~~~~-~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~--~~~~~~-~ 83 (174)
..++||-+.++.+++.+.-... + .+.|+|++|+... .....++++++.... ++.+.++.... .++.+. .
T Consensus 132 ~~l~G~~Y~~lR~eF~~~~~~~r~~~~~ILv~~GG~d~-----~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~ 205 (282)
T 3hbm_A 132 EVRCGFSYALIREEFYQEAKENRKKKYDFFICMGGTDI-----KNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAK 205 (282)
T ss_dssp EEEESGGGCCCCHHHHHHTTCCCCCCEEEEEECCSCCT-----TCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHH
T ss_pred eEeeCCcccccCHHHHHhhhhccccCCeEEEEECCCch-----hhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHh
Confidence 4467888888998887643222 2 4689999998743 336677888886644 56666665432 111110 1
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEec
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~ 153 (174)
...|+.+.+|++++.-+. .+||++||+|| +|++|+++.|+|+|++|...+|..||+.+++.|+++.+.
T Consensus 206 ~~~~v~v~~~~~~m~~~m-~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 206 LHNNIRLFIDHENIAKLM-NESNKLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYK 273 (282)
T ss_dssp TCSSEEEEESCSCHHHHH-HTEEEEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECG
T ss_pred hCCCEEEEeCHHHHHHHH-HHCCEEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcc
Confidence 234899999998886433 78999999999 799999999999999999999999999999999999975
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.7e-12 Score=100.53 Aligned_cols=131 Identities=17% Similarity=0.171 Sum_probs=99.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccccc--cCCC-CCEEEeecCCc-hhhhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVLNA--KTLP-DNVFIQKWYPQ-TDILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~--~~~~-~nv~~~~~~p~-~~~l~~~~~ 105 (174)
++++++..|+.. .....+.++++++.. +.++++..|.....++.+ +..+ +++.+.+|+++ ..++ ..|
T Consensus 183 ~~~il~~~g~~~-----~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 255 (364)
T 1f0k_A 183 PVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWA 255 (364)
T ss_dssp SEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHC
T ss_pred CcEEEEEcCchH-----hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHH--HhC
Confidence 466777777774 344555566666554 456667676644222111 0122 58999999854 5566 789
Q ss_pred cEEEecCChhhHHHHHHcCCCeEecccc---chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHh
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGVPFF---GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~vP~~---~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~l 169 (174)
|++|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+.|.|..++.++.+.+++.+++.++
T Consensus 256 d~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 256 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred CEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc
Confidence 9999999999999999999999999987 799999999999999999987777799999999877
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.9e-07 Score=66.10 Aligned_cols=129 Identities=17% Similarity=0.135 Sum_probs=89.3
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-CcEEEEecCCCCccc----c--ccCCCCCEEEeecCCch---hhhc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-LPIFWKIDITNDPVL----N--AKTLPDNVFIQKWYPQT---DILA 101 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-~~~i~~~~~~~~~~~----~--~~~~~~nv~~~~~~p~~---~~l~ 101 (174)
++.+++..|+... ......++++++..+ .++++...+.....+ . ...+++|+.+.+++++. .++
T Consensus 22 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~- 95 (177)
T 2f9f_A 22 YGDFWLSVNRIYP-----EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY- 95 (177)
T ss_dssp CCSCEEEECCSSG-----GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH-
T ss_pred CCCEEEEEecccc-----ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH-
Confidence 3556677788753 334677778877774 577776544332221 1 11356799999999973 455
Q ss_pred CCCccEEEe----cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCCC
Q psy16939 102 HPNLRLFIT----HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174 (174)
Q Consensus 102 ~~~~~~~I~----hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~~ 174 (174)
..+|++|. -+...++.||+++|+|+|+-.. ..+...+++.+.|+.+ . .+.+++.++|.+++++++
T Consensus 96 -~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~--~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 96 -SRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-N--ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp -HHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-C--SCHHHHHHHHHHHHHCTT
T ss_pred -HhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-C--CCHHHHHHHHHHHHhCHH
Confidence 77999998 2334589999999999999754 3444555556678887 3 378999999999998763
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=9.4e-08 Score=75.04 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCCC-Cc-ccccc-CCCCCEEEeecCCc---hhhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDITN-DP-VLNAK-TLPDNVFIQKWYPQ---TDIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~-~~-~~~~~-~~~~nv~~~~~~p~---~~~l 100 (174)
+++++++.|.... ..+ .+..+++++.. . +.++++..+... .. .+.+. ...+++.+.+++++ ..++
T Consensus 205 ~~~vl~~~gr~~~---~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 205 KKMILVTGHRRES---FGR-GFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp SEEEEEECCCBSS---CCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCCccc---cch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4678888887643 112 24444444433 3 346666444321 11 11110 12368999777664 3455
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+.+|. ++.||+++|+|+|..+..+.... +.+.|.|+.++. +.++|.+++.++++|+
T Consensus 281 --~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~~g~g~lv~~---d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 --NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVTAGTVRLVGT---DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp --HHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHHHTSEEEECS---SHHHHHHHHHHHHHCH
T ss_pred --HhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhhCCceEEeCC---CHHHHHHHHHHHHhCh
Confidence 779999999864 58899999999999986443322 345688988864 7899999999999874
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=98.50 E-value=2.2e-07 Score=72.81 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCCC-C-cccccc-CCCCCEEEeecCCc---hhhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDITN-D-PVLNAK-TLPDNVFIQKWYPQ---TDIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~-~-~~~~~~-~~~~nv~~~~~~p~---~~~l 100 (174)
++.|+++.|..... + .+..++++++. . +.++++..+... . ..+.+. ...+++.+.+++++ ..++
T Consensus 198 ~~~vl~~~gr~~~~----k-~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 198 GPYVTVTMHRRENW----P-LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SCEEEECCCCGGGG----G-GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccch----H-HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 46677777754220 1 23444444433 2 345665545322 1 111110 12358999966654 3566
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+.+| |.+.||+++|+|+|+.+..+++.. +.+.|.|+.+. .+.++|.+++.++++|+
T Consensus 273 --~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 --RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG---TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp --HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC---SCHHHHHHHHHHHHTCH
T ss_pred --HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC---CCHHHHHHHHHHHHhCh
Confidence 67999999984 556799999999999876555544 24568888874 27899999999999875
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.47 E-value=6.2e-07 Score=71.40 Aligned_cols=128 Identities=15% Similarity=0.157 Sum_probs=84.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC----CCcEEEEecCCCCcc-cccc----CCCCCEEEeecCCch---hh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL----KLPIFWKIDITNDPV-LNAK----TLPDNVFIQKWYPQT---DI 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~~~-~~~~----~~~~nv~~~~~~p~~---~~ 99 (174)
++.++++.|.... ....+.+..+++++.+. +.++++..++. ..+ +.+. ...+|+++.+.+++. .+
T Consensus 203 ~~~iLvt~hr~e~--~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~-~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l 279 (385)
T 4hwg_A 203 KQYFLISSHREEN--VDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR-TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKL 279 (385)
T ss_dssp TSEEEEEECCC-------CHHHHHHHHHHHHHHHHHCCEEEEEECHH-HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHH
T ss_pred CCEEEEEeCCchh--cCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHH
Confidence 5788888876532 01224456666666543 45677765432 111 1110 123688887776544 45
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEeccccch-HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGD-QYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~d-Q~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+ ..||++|+..|. ...||.+.|+|+|.++...+ |. ..+.|.++.+.. +.++|.+++.++++|+
T Consensus 280 ~--~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e-----~v~~G~~~lv~~---d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 280 Q--MNAFCILSDSGT-ITEEASILNLPALNIREAHERPE-----GMDAGTLIMSGF---KAERVLQAVKTITEEH 343 (385)
T ss_dssp H--HHCSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH-----HHHHTCCEECCS---SHHHHHHHHHHHHTTC
T ss_pred H--HhCcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh-----hhhcCceEEcCC---CHHHHHHHHHHHHhCh
Confidence 6 679999999886 56999999999999976443 32 256788877742 6899999999999875
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.9e-07 Score=72.14 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=80.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCC-CCcc-ccc-cCCCCCEEEeecCCch---hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDIT-NDPV-LNA-KTLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~-~~~~-~~~-~~~~~nv~~~~~~p~~---~~l 100 (174)
++.++++.+-... .... +..+++++... +.++++..+.+ ...+ +.+ ....+++.+.+++++. .++
T Consensus 230 ~~~vlv~~hR~~~---~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 230 KKLILVTGHRRES---FGGG-FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp SEEEEEECSCBCC---CTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEECCccc---chhH-HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 5677776532111 1122 45555555443 34677655532 1111 111 0234689998887543 445
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..| |.+.||++.|+|+|+.....++. .+.+.|.++.+.. +.++|.+++.++++|+
T Consensus 306 --~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 306 --DRAHIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDP 368 (396)
T ss_dssp --HHCSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCH
T ss_pred --HhcCEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCH
Confidence 77999999998 56689999999999985444443 2456788877642 5899999999999764
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=98.32 E-value=2.1e-06 Score=67.01 Aligned_cols=128 Identities=17% Similarity=0.184 Sum_probs=80.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-----CCcEEEEecCCC-Ccc-cccc-CCCCCEEEeecCCch---hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-----KLPIFWKIDITN-DPV-LNAK-TLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-----~~~~i~~~~~~~-~~~-~~~~-~~~~nv~~~~~~p~~---~~l 100 (174)
+++++++.|.... ....+..++++++.. +.++++..++.. +.+ +.+. ...+++.+.+++++. .++
T Consensus 205 ~~~vl~~~gr~~~----~~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 205 NRLVLMTAHRREN----LGEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp SEEEEEECCCGGG----TTHHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCeEEEEeccccc----chhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4667777776542 112345555555432 235554323211 011 1110 123689998877654 455
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..| +++.||+++|+|+|..+..+... .+.+.|.|+.+.. +.+++.+++.++++|+
T Consensus 281 --~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~g~g~~v~~---d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 --ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEAGTLKLAGT---DEETIFSLADELLSDK 343 (375)
T ss_dssp --HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHTTSEEECCS---CHHHHHHHHHHHHHCH
T ss_pred --HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecCCceEEcCC---CHHHHHHHHHHHHhCh
Confidence 77999999874 56999999999999885433322 2345678888752 7899999999999774
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.32 E-value=4.1e-07 Score=72.81 Aligned_cols=128 Identities=17% Similarity=0.207 Sum_probs=80.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCC-CCcc-ccc-cCCCCCEEEeecCCch---hhh
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDIT-NDPV-LNA-KTLPDNVFIQKWYPQT---DIL 100 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~-~~~~-~~~-~~~~~nv~~~~~~p~~---~~l 100 (174)
++.++++.|.... ..+ .+..+++++.. . +.++++..+++ ...+ +.+ ....+++++.+++++. .++
T Consensus 224 ~~~vlv~~~r~~~---~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 224 NRLILMTAHRREN---LGE-PMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp CEEEEECCCCHHH---HTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccc---cCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 5677776653211 011 13444444433 3 34677765543 1111 111 0234689999998743 455
Q ss_pred cCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..||++|+..|..+ .||++.|+|+|++|...+++. +.+.|.++.+.. +.++|.+++.++++|+
T Consensus 300 --~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 300 --RKSYLVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNK 362 (403)
T ss_dssp --HHEEEEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCH
T ss_pred --HhcCEEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCH
Confidence 67999999986433 799999999999965555443 246788888753 7899999999998764
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=4.3e-07 Score=71.16 Aligned_cols=133 Identities=14% Similarity=0.116 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh-hC-CCcEEEEecCCCCccccc--cCCCCCEEEeecCCchhhhcC-CCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK-QL-KLPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQTDILAH-PNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~-~~-~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~~~l~~-~~~~ 106 (174)
++.+++..|+.... -..+.+-+.+..+. .. +.++++...+.....+.+ ....+++.+.+++++.++... ..+|
T Consensus 197 ~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 274 (394)
T 3okp_A 197 TTPVIACNSRLVPR--KGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD 274 (394)
T ss_dssp TCCEEEEESCSCGG--GCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS
T ss_pred CceEEEEEeccccc--cCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC
Confidence 45778888887431 12222222233222 22 346666544332221111 134589999999976653221 7799
Q ss_pred EEEe-----------cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 107 LFIT-----------HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 107 ~~I~-----------hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
++|. -|...++.||+++|+|+|+-+..+-. ..+. .|.|..++.. +.+++.+++.++++++
T Consensus 275 ~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~----e~i~-~~~g~~~~~~--d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 275 IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP----ETVT-PATGLVVEGS--DVDKLSELLIELLDDP 345 (394)
T ss_dssp EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG----GGCC-TTTEEECCTT--CHHHHHHHHHHHHTCH
T ss_pred EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH----HHHh-cCCceEeCCC--CHHHHHHHHHHHHhCH
Confidence 9998 66678999999999999997653211 1222 2477777543 6899999999998764
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=9e-06 Score=63.18 Aligned_cols=130 Identities=13% Similarity=0.179 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC------CcEEEEecCCCCccc----cccCCCCCEEEeecCCc-hhh
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK------LPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQ-TDI 99 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~------~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~-~~~ 99 (174)
+++.+++..|+... ......+++++.... .++++ +|.....++ .+....+++.+.++... ..+
T Consensus 194 ~~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG-----RKGVDRSIEALASLPESLRHNTLLFV-VGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp TTCEEEEEECSCTT-----TTTHHHHHHHHHTSCHHHHHTEEEEE-ESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CCCeEEEEeccchh-----hcCHHHHHHHHHHhHhccCCceEEEE-EcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHH
Confidence 34678888887753 233566667776653 24444 443222211 11134578999998654 345
Q ss_pred hcCCCccEEEe----cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 100 LAHPNLRLFIT----HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 100 l~~~~~~~~I~----hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+ ..+|++|. -|...++.||+++|+|+|+-+..+ +...+++.+.|..+.. ..+.+++.+++.++++|+
T Consensus 268 ~--~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 268 M--AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp H--HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCH
T ss_pred H--HhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCC----chhhhccCCceEEeCC-CCCHHHHHHHHHHHHcCh
Confidence 5 67999997 556789999999999999986532 3456677788998852 237899999999998764
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=9.5e-06 Score=64.30 Aligned_cols=131 Identities=8% Similarity=-0.059 Sum_probs=82.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCC--------Cccc-cccCCCCCEEEeecCC---c--
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITN--------DPVL-NAKTLPDNVFIQKWYP---Q-- 96 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~--------~~~~-~~~~~~~nv~~~~~~p---~-- 96 (174)
...+++..|...... ....+++.+....... +.++++...+.. +.++ .+....+++.+.+|++ +
T Consensus 230 ~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~ 308 (416)
T 2x6q_A 230 EKPIITQVSRFDPWK-GIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHARE 308 (416)
T ss_dssp TSCEEEEECCCCTTS-CHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHH
T ss_pred CCcEEEEEecccccc-CHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHH
Confidence 456677778765421 1123333333333333 456666655432 1111 1113457999999765 2
Q ss_pred -hhhhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 97 -TDILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 97 -~~~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
..++ ..+|++|... ...++.||+++|+|+|.-+. ..+...+.+.+.|..++ +.+++.+++.++++
T Consensus 309 ~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~i~~ll~ 378 (416)
T 2x6q_A 309 VNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEVVLYLLK 378 (416)
T ss_dssp HHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHHHHHHHH
T ss_pred HHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHHHHHHHh
Confidence 2345 6799999765 46789999999999999764 23445555566888885 78999999999987
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
|+
T Consensus 379 ~~ 380 (416)
T 2x6q_A 379 HP 380 (416)
T ss_dssp CH
T ss_pred CH
Confidence 64
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.9e-05 Score=62.86 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC---CCcEEEEec----CCCCccc----cccCCCCCEEEeecCCchh-
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL---KLPIFWKID----ITNDPVL----NAKTLPDNVFIQKWYPQTD- 98 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~---~~~~i~~~~----~~~~~~~----~~~~~~~nv~~~~~~p~~~- 98 (174)
+.+.+++..|...... ....+++.+.....+. +.++++... +.....+ .+..+.+++.+.+++++.+
T Consensus 241 ~~~~~i~~~G~~~~~K-g~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 319 (438)
T 3c48_A 241 LHTKVVAFVGRLQPFK-GPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSEL 319 (438)
T ss_dssp SSSEEEEEESCBSGGG-CHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHH
T ss_pred CCCcEEEEEeeecccC-CHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHH
Confidence 3467777888875421 1122233333332332 235555443 1121111 1113467999999998654
Q ss_pred --hhcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 99 --ILAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 99 --~l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
++ ..+|++|... ...++.||+++|+|+|+-+.. .....+.+.+.|+.++.. +.+++.++|.++++|
T Consensus 320 ~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--d~~~la~~i~~l~~~ 391 (438)
T 3c48_A 320 VAVY--RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGH--SPHAWADALATLLDD 391 (438)
T ss_dssp HHHH--HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBTTTEEEESSC--CHHHHHHHHHHHHHC
T ss_pred HHHH--HhCCEEEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCCCcEEECCCC--CHHHHHHHHHHHHcC
Confidence 45 6799999763 356899999999999997643 233445555678888643 689999999999876
Q ss_pred C
Q psy16939 173 P 173 (174)
Q Consensus 173 ~ 173 (174)
+
T Consensus 392 ~ 392 (438)
T 3c48_A 392 D 392 (438)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=4.5e-06 Score=65.63 Aligned_cols=129 Identities=12% Similarity=0.051 Sum_probs=83.0
Q ss_pred eEEEEcCCC-cCCCCCCHHHHHHHHHHHhhC--CCcEEEEecCCCCccccc--cCCCCCEEEeecCCch---hhhcCCCc
Q psy16939 34 FVYMSFGSV-VDPTKLSEETKLGFLEVFKQL--KLPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQT---DILAHPNL 105 (174)
Q Consensus 34 ~v~vs~Gs~-~~~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~---~~l~~~~~ 105 (174)
.+++..|+. ... -..+.+-+.+..+.+. +.++++...+.. .++.+ +...+++.+.+++++. .++ ..+
T Consensus 209 ~~i~~~G~~~~~~--Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~--~~a 283 (406)
T 2gek_A 209 RTVLFLGRYDEPR--KGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAM--RSA 283 (406)
T ss_dssp CEEEEESCTTSGG--GCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHH--HHS
T ss_pred eEEEEEeeeCccc--cCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHH--HHC
Confidence 577778877 431 1223232333333322 346655544333 22111 0226789999999875 455 679
Q ss_pred cEEEecCC-----hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHGG-----ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hgG-----~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++|.-.. ..++.||+++|+|+|+-+. ......+.+...|..++.+ +.+++.+++.++++++
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPVD--DADGMAAALIGILEDD 350 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCTT--CHHHHHHHHHHHHHCH
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCCC--CHHHHHHHHHHHHcCH
Confidence 99996643 5589999999999999865 3445556666778887543 6899999999998764
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.08 E-value=3.1e-05 Score=55.13 Aligned_cols=129 Identities=10% Similarity=0.066 Sum_probs=80.0
Q ss_pred CeEEEEcCCCc-CCCCCCHHHHHHHHHHHh---hC-CCcEEEEecCC--CCccccc--cCCCCCEEE-eecCCchh---h
Q psy16939 33 GFVYMSFGSVV-DPTKLSEETKLGFLEVFK---QL-KLPIFWKIDIT--NDPVLNA--KTLPDNVFI-QKWYPQTD---I 99 (174)
Q Consensus 33 ~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~---~~-~~~~i~~~~~~--~~~~~~~--~~~~~nv~~-~~~~p~~~---~ 99 (174)
..+++..|... .. -..+.+-+.+..+. +. +.++++...+. ....+.+ ...+ ++.+ .+++++.+ +
T Consensus 36 ~~~i~~~G~~~~~~--K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~ 112 (200)
T 2bfw_A 36 GVTFMFIGRFDRGQ--KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 112 (200)
T ss_dssp CEEEEEESCBCSSS--SCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCEEEEeecccccc--CCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHH
Confidence 34777888876 32 13333333344442 22 23555544333 1111100 0233 8999 99998543 4
Q ss_pred hcCCCccEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc-CC
Q psy16939 100 LAHPNLRLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN-DP 173 (174)
Q Consensus 100 l~~~~~~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~-~~ 173 (174)
+ ..+|++|... ...++.||+++|+|+|+-... .....+ ..+.|..++.. +.+++.+++.++++ ++
T Consensus 113 ~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~~~g~~~~~~--~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 113 Y--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--DPGELANAILKALELSR 182 (200)
T ss_dssp H--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CTTTCEEECTT--CHHHHHHHHHHHHHCCH
T ss_pred H--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CCCceEEecCC--CHHHHHHHHHHHHhcCH
Confidence 4 7899999654 256899999999998887542 344445 55678887543 68999999999987 64
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.7e-05 Score=65.41 Aligned_cols=133 Identities=18% Similarity=0.238 Sum_probs=83.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEec-CCCC-cc----ccccCCC-CCEEEeecCCchh---hhcC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKID-ITND-PV----LNAKTLP-DNVFIQKWYPQTD---ILAH 102 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~-~~~~-~~----~~~~~~~-~nv~~~~~~p~~~---~l~~ 102 (174)
++|+ ..|.... +....+++.+...+++.+.-.++.+| .... .+ +.+..+. +++.+.+++++.+ ++
T Consensus 377 ~~v~-~~g~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~-- 451 (568)
T 2vsy_A 377 GVVL-CCFNNSY--KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARY-- 451 (568)
T ss_dssp SCEE-EECCCGG--GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHG--
T ss_pred CEEE-EeCCccc--cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHH--
Confidence 4444 5565544 23556666666655555543344445 3221 11 1111344 7899999998544 44
Q ss_pred CCccEEEe---cCChhhHHHHHHcCCCeEeccccch-HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 103 PNLRLFIT---HGGISSLMEASSLGVPVLGVPFFGD-QYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 103 ~~~~~~I~---hgG~~t~~eal~~g~P~i~vP~~~d-Q~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++|. .|+..++.||+++|+|+|..|-..- -..-+..+...|+...+.. +.+++.+++.++++|+
T Consensus 452 ~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 452 RHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDP 523 (568)
T ss_dssp GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCH
T ss_pred hcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCH
Confidence 77999983 2667899999999999999764211 1122455666787776643 7889999999988764
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=62.55 Aligned_cols=132 Identities=13% Similarity=0.132 Sum_probs=78.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh-CCCcEEEEecCCCCccc----cccCCCCCEEEeecCCc-hhhhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ-LKLPIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQ-TDILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~-~~~~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~-~~~l~~~~~ 105 (174)
++.+++..|..... -..+.+-+.+..+.+ .+.++++...+....++ .+....+++.+.++... ..++ ..+
T Consensus 210 ~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~--~~a 285 (394)
T 2jjm_A 210 SEKILIHISNFRKV--KRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL--AMS 285 (394)
T ss_dssp --CEEEEECCCCGG--GTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHH--HTC
T ss_pred CCeEEEEeeccccc--cCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHH--HhC
Confidence 35667777877531 122222222232322 24555554433321111 11123568888887543 4566 679
Q ss_pred cEEE----ecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFI----THGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I----~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++| .-|...++.||+++|+|+|+-+..+ ....+.+.+.|+.++.. +.+++.+++.++++|+
T Consensus 286 dv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~~--d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 286 DLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEVG--DTTGVADQAIQLLKDE 351 (394)
T ss_dssp SEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECTT--CHHHHHHHHHHHHHCH
T ss_pred CEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCCC--CHHHHHHHHHHHHcCH
Confidence 9999 5566789999999999999986532 12223334578887543 6899999999998764
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=5.8e-05 Score=59.67 Aligned_cols=136 Identities=10% Similarity=0.036 Sum_probs=83.9
Q ss_pred HhcCCCCeEEEEcCCCc-CCCCCCHHHHHHHHHHHhhC----CCcEEEEecCCCC--c---cccccCCCCCEEEeecCCc
Q psy16939 27 ADAAKGGFVYMSFGSVV-DPTKLSEETKLGFLEVFKQL----KLPIFWKIDITND--P---VLNAKTLPDNVFIQKWYPQ 96 (174)
Q Consensus 27 ~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~--~---~~~~~~~~~nv~~~~~~p~ 96 (174)
+...++ .+++..|+.. .. -..+.+-+.+..+... +.++++...+... . +..+ ..++++.+.+|+++
T Consensus 246 ~~~~~~-~~i~~~G~~~~~~--Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~-~~~~~~~~~g~~~~ 321 (439)
T 3fro_A 246 FGMDEG-VTFMFIGRFDRGQ--KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEE-KHGNVKVITEMLSR 321 (439)
T ss_dssp HTCCSC-EEEEEECCSSCTT--BCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHH-HCTTEEEECSCCCH
T ss_pred cCCCCC-cEEEEEccccccc--ccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHh-hcCCEEEEcCCCCH
Confidence 333334 8888889886 42 1334444444444442 3355554433221 1 1111 24466777888887
Q ss_pred hhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 97 TDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 97 ~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
.++... ..||++|.- |-..++.||+++|+|+|.-... .....+ +.|.|..++.. +.+++.+++.++++
T Consensus 322 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~e~~-~~~~g~~~~~~--d~~~la~~i~~ll~ 394 (439)
T 3fro_A 322 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--DPGELANAILKALE 394 (439)
T ss_dssp HHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----HHHHHC-CTTTCEEECTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----CcceeE-EcCceEEeCCC--CHHHHHHHHHHHHh
Confidence 653211 789999954 4457999999999999997542 222233 24688888643 68999999999987
Q ss_pred -CC
Q psy16939 172 -DP 173 (174)
Q Consensus 172 -~~ 173 (174)
++
T Consensus 395 ~~~ 397 (439)
T 3fro_A 395 LSR 397 (439)
T ss_dssp HTT
T ss_pred cCH
Confidence 54
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=3.3e-05 Score=62.75 Aligned_cols=131 Identities=11% Similarity=0.080 Sum_probs=84.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC----c-EEEEecC--CC--------------Cccc----cccCCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL----P-IFWKIDI--TN--------------DPVL----NAKTLPD 86 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~----~-~i~~~~~--~~--------------~~~~----~~~~~~~ 86 (174)
...+++..|.... ..-...++++++.... . .++.+|. .. ..++ .+..+.+
T Consensus 261 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~ 335 (499)
T 2r60_A 261 ELPAIIASSRLDQ-----KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG 335 (499)
T ss_dssp TSCEEEECSCCCG-----GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT
T ss_pred CCcEEEEeecCcc-----ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc
Confidence 4567788888743 3335666777666531 2 3444554 11 1111 1113467
Q ss_pred CEEEeecCCchhhhcC-CCc----cEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCC
Q psy16939 87 NVFIQKWYPQTDILAH-PNL----RLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTL 157 (174)
Q Consensus 87 nv~~~~~~p~~~~l~~-~~~----~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~ 157 (174)
++.+.+++++.++... ..+ |++|.- |-..++.||+++|+|+|+-... .....+.+...|..++..
T Consensus 336 ~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~~~~-- 409 (499)
T 2r60_A 336 KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLVDPE-- 409 (499)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEECTT--
T ss_pred eEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEeCCC--
Confidence 8999999976543221 679 999954 3356899999999999988642 233444555578888643
Q ss_pred CHHHHHHHHHHhhcCC
Q psy16939 158 TKQSFLKNAQTMLNDP 173 (174)
Q Consensus 158 ~~~~l~~al~~ll~~~ 173 (174)
+.+++.++|.++++|+
T Consensus 410 d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 410 DPEDIARGLLKAFESE 425 (499)
T ss_dssp CHHHHHHHHHHHHSCH
T ss_pred CHHHHHHHHHHHHhCH
Confidence 6899999999998764
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0002 Score=57.08 Aligned_cols=119 Identities=15% Similarity=0.080 Sum_probs=79.7
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC-CCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEe
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQL-KLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFIT 110 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~ 110 (174)
+.+++..|.... .+..+..+. +.. +.++++...+. .. +....+++.+.+++++.++..+ ..+|++|.
T Consensus 222 ~~~i~~vGrl~~----~Kg~~~~l~---~~~~~~~l~ivG~g~-~~---~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ 290 (406)
T 2hy7_A 222 GIHAVAVGSMLF----DPEFFVVAS---KAFPQVTFHVIGSGM-GR---HPGYGDNVIVYGEMKHAQTIGYIKHARFGIA 290 (406)
T ss_dssp SEEEEEECCTTB----CHHHHHHHH---HHCTTEEEEEESCSS-CC---CTTCCTTEEEECCCCHHHHHHHHHTCSEEEC
T ss_pred CcEEEEEecccc----ccCHHHHHH---HhCCCeEEEEEeCch-HH---hcCCCCCEEEcCCCCHHHHHHHHHhcCEEEE
Confidence 378888898865 455532222 223 34565553332 22 1145789999999986653221 77999985
Q ss_pred c----CChhhHHHHH-------HcCCCeEeccccchHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHhhcCCC
Q psy16939 111 H----GGISSLMEAS-------SLGVPVLGVPFFGDQYRNMVLLRHRGYALI-EPIQTLTKQSFLKNAQTMLNDPR 174 (174)
Q Consensus 111 h----gG~~t~~eal-------~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~-l~~~~~~~~~l~~al~~ll~~~~ 174 (174)
- |-..++.||+ ++|+|+|.-.. +..-..|.. +..+ +.+++.++|.++++++.
T Consensus 291 ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 291 PYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp CBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred CCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 2 3456789999 99999998754 444456777 7544 68999999999998863
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.85 E-value=8.4e-06 Score=56.41 Aligned_cols=126 Identities=12% Similarity=0.146 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC----CcEEEEecCCCCccccc--cCCCCCEEEeecCCchhhhcC-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK----LPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQTDILAH-PN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~----~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~~~l~~-~~ 104 (174)
++++++..|.... ......+++++.... .++++...+.....+.+ ...+.++.+ +++++.++... ..
T Consensus 1 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~ 74 (166)
T 3qhp_A 1 TPFKIAMVGRYSN-----EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKT 74 (166)
T ss_dssp CCEEEEEESCCST-----TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTT
T ss_pred CceEEEEEeccch-----hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHh
Confidence 3678888998854 233666667766653 24454433322111110 022337888 99986543221 78
Q ss_pred ccEEEec----CChhhHHHHHHcCC-CeEecc-c--cchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 105 LRLFITH----GGISSLMEASSLGV-PVLGVP-F--FGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 105 ~~~~I~h----gG~~t~~eal~~g~-P~i~vP-~--~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+|++|.- |...++.||+++|+ |+|.-. . ..+-..+ .+. .+.. -+.+++.+++.++++++
T Consensus 75 adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~------~~~--~~~~--~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 75 CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALD------ERS--LFEP--NNAKDLSAKIDWWLENK 141 (166)
T ss_dssp CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS------GGG--EECT--TCHHHHHHHHHHHHHCH
T ss_pred CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC------Cce--EEcC--CCHHHHHHHHHHHHhCH
Confidence 9999973 44569999999997 999932 1 1121111 122 3332 37899999999998764
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=1.7e-05 Score=61.26 Aligned_cols=125 Identities=10% Similarity=0.003 Sum_probs=82.3
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccc--cCCCCCEEEeecCCch---hhhcCCCccE
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA--KTLPDNVFIQKWYPQT---DILAHPNLRL 107 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~nv~~~~~~p~~---~~l~~~~~~~ 107 (174)
..+++..|.... ..-...++++++..+.++++...+.....+.+ +...+++.+.+++++. .++ ..+|+
T Consensus 162 ~~~i~~vG~~~~-----~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~--~~adv 234 (342)
T 2iuy_A 162 EDFLLFMGRVSP-----HKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLL--ASAHA 234 (342)
T ss_dssp CSCEEEESCCCG-----GGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHH--HHCSE
T ss_pred CCEEEEEecccc-----ccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHH--HhCCE
Confidence 345666777643 33356666777666777777554432111100 0234899999999876 455 77999
Q ss_pred EEec--------------CChhhHHHHHHcCCCeEeccccchHHHHHHHHHH--cCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 108 FITH--------------GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH--RGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 108 ~I~h--------------gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~--~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
+|.. |-..++.||+++|+|+|.-...+ ....+++ -..|+.++ . +.+++.+++.++++
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~--~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTD--F-APDEARRTLAGLPA 307 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSC--C-CHHHHHHHHHTSCC
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcC--C-CHHHHHHHHHHHHH
Confidence 9943 33578999999999999987532 4455555 45666664 3 78899999988763
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=5.3e-05 Score=60.66 Aligned_cols=83 Identities=8% Similarity=-0.059 Sum_probs=59.2
Q ss_pred CCCCEEEeecCCchhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCC
Q psy16939 84 LPDNVFIQKWYPQTDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLT 158 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~ 158 (174)
...++.+.++++..++..+ ..||+++.- +=..++.||+++|+|+|. ...+ ....++.-..|+.++.. +
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~--d 365 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL--N 365 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC--S
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC--C
Confidence 4568999999986653322 789999963 224568999999999998 3222 11333444578877654 6
Q ss_pred HHHHHHHHHHhhcCC
Q psy16939 159 KQSFLKNAQTMLNDP 173 (174)
Q Consensus 159 ~~~l~~al~~ll~~~ 173 (174)
.+++.++|.++++|+
T Consensus 366 ~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 366 PENIAETLVELCMSF 380 (413)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCH
Confidence 899999999999875
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=4e-05 Score=60.55 Aligned_cols=130 Identities=8% Similarity=0.069 Sum_probs=77.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhh----C-CCcEEEEecCCCC------ccccc----cCCCCC-------EE
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQ----L-KLPIFWKIDITND------PVLNA----KTLPDN-------VF 89 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~~------~~~~~----~~~~~n-------v~ 89 (174)
...+++..|.... ..-...++++++. . +.++++...+... ..+.+ ..+.++ +.
T Consensus 183 ~~~~il~vGr~~~-----~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNTA-----RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSSG-----GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCch-----hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceee
Confidence 4678888888643 2223334444333 2 3577776554322 11110 124444 78
Q ss_pred EeecCCchhhhcC-CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCc---------------e
Q psy16939 90 IQKWYPQTDILAH-PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGY---------------A 149 (174)
Q Consensus 90 ~~~~~p~~~~l~~-~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~---------------g 149 (174)
+.+++++.++... ..||++|.- |...++.||+++|+|+|.-... .....+.+... |
T Consensus 258 ~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 258 NRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECTTTCS
T ss_pred ccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccccccC
Confidence 8899985543221 779999953 4456899999999999986542 23333332221 4
Q ss_pred e--EecCCCCCHHHHHHHHHHhhcCC
Q psy16939 150 L--IEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 150 ~--~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+ .+... +.+++.+++ ++++|+
T Consensus 334 ~~gl~~~~--d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEGII--DVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEEEC--CHHHHHHHH-HHTTSH
T ss_pred cceeeCCC--CHHHHHHHH-HHhcCH
Confidence 4 55433 789999999 998774
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.73 E-value=9.2e-05 Score=62.10 Aligned_cols=134 Identities=12% Similarity=0.109 Sum_probs=89.5
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE--ecCCC-Cc-----cccccCCCCCEEEeecCCchhhhc-CC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK--IDITN-DP-----VLNAKTLPDNVFIQKWYPQTDILA-HP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~--~~~~~-~~-----~~~~~~~~~nv~~~~~~p~~~~l~-~~ 103 (174)
.++|.+++... +...+.++...+.+++.+..++|. .+... .. ++.+..+.+.+.+.+..|..+.++ +.
T Consensus 441 ~v~Fg~fn~~~---Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 441 VVNIGIASTTM---KLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp EEEEEEEECST---TCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred eEEEEECCccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 45666666654 478999999999999998877663 34221 11 111112346888899888766432 26
Q ss_pred CccEEEec---CChhhHHHHHHcCCCeEeccccc-hHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHhhcC
Q psy16939 104 NLRLFITH---GGISSLMEASSLGVPVLGVPFFG-DQYRNMVLLRHRGYALI-EPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 104 ~~~~~I~h---gG~~t~~eal~~g~P~i~vP~~~-dQ~~na~~l~~~G~g~~-l~~~~~~~~~l~~al~~ll~~ 172 (174)
.+|+++.- +|.+|++||+..|+|+|..+-.. .-..-+..+...|+... +.. +.++..+...++.+|
T Consensus 518 ~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 518 NCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAEN 588 (631)
T ss_dssp TCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHC
T ss_pred cCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCC
Confidence 79999865 78899999999999999997532 22334455677888752 422 566666666666655
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00031 Score=60.23 Aligned_cols=119 Identities=12% Similarity=0.178 Sum_probs=87.2
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-----c-ccc-cCCCCCEEEeecCCchhhhc-CC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-----V-LNA-KTLPDNVFIQKWYPQTDILA-HP 103 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-----~-~~~-~~~~~nv~~~~~~p~~~~l~-~~ 103 (174)
..++|.+|..... +.++.+..-.+.|++.+..++|........ + +.+ ...++++.+.+..+..+.|. +.
T Consensus 522 ~~v~f~~fN~~~K---i~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 522 DAIVYCNFNQLYK---IDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp TSEEEECCSCGGG---CCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCEEEEeCCcccc---CCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 4578888877765 899999999999999999888887653321 1 111 12357899999888666443 37
Q ss_pred CccEEEe---cCChhhHHHHHHcCCCeEeccc-cchHHHHHHHHHHcCceeEec
Q psy16939 104 NLRLFIT---HGGISSLMEASSLGVPVLGVPF-FGDQYRNMVLLRHRGYALIEP 153 (174)
Q Consensus 104 ~~~~~I~---hgG~~t~~eal~~g~P~i~vP~-~~dQ~~na~~l~~~G~g~~l~ 153 (174)
.+|+++. .+|.+|++|||..|+|+|.+|- ..--+.-+..+...|+...+-
T Consensus 599 ~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia 652 (723)
T 4gyw_A 599 LADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA 652 (723)
T ss_dssp GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC
T ss_pred CCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc
Confidence 7999997 7888999999999999999984 223444566667778876654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00027 Score=57.05 Aligned_cols=126 Identities=5% Similarity=-0.171 Sum_probs=78.6
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-C-c---cccccCCCCCEE-EeecCCch---hhhcCC
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-D-P---VLNAKTLPDNVF-IQKWYPQT---DILAHP 103 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-~-~---~~~~~~~~~nv~-~~~~~p~~---~~l~~~ 103 (174)
..+++..|..... -..+.+-+.+..+.+.+.++++...+.. . . ++.. ..++++. +.++ +.. .++ .
T Consensus 291 ~~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~-~~~~~v~~~~g~-~~~~~~~~~--~ 364 (485)
T 1rzu_A 291 SPLFCVISRLTWQ--KGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAAS-RHHGRVGVAIGY-NEPLSHLMQ--A 364 (485)
T ss_dssp SCEEEEESCBSTT--TTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHH-HTTTTEEEEESC-CHHHHHHHH--H
T ss_pred CeEEEEEccCccc--cCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHH-hCCCcEEEecCC-CHHHHHHHH--h
Confidence 4588888887642 1333333333333333567777655431 1 1 1111 3457887 6777 443 345 7
Q ss_pred CccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc---------CceeEecCCCCCHHHHHHHHHHhh
Q psy16939 104 NLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR---------GYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 104 ~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~---------G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
.+|++|.- |-..++.||+++|+|+|+-... .....+.+- +.|..++.. +.+++.++|.+++
T Consensus 365 ~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ll 438 (485)
T 1rzu_A 365 GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRRTV 438 (485)
T ss_dssp HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHHHH
T ss_pred cCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccCCcceEeCCC--CHHHHHHHHHHHH
Confidence 79999954 4467899999999999997542 233444433 678888643 6899999999998
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00022 Score=56.24 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=60.2
Q ss_pred CCEEEeecCCchh-hhcCCCccEEEec-----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCH
Q psy16939 86 DNVFIQKWYPQTD-ILAHPNLRLFITH-----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTK 159 (174)
Q Consensus 86 ~nv~~~~~~p~~~-~l~~~~~~~~I~h-----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~ 159 (174)
.++.+.++..... ++ ..+|+++.- +|..++.||+++|+|+|.-|..+........+.+.|.++... +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CH
Confidence 3577777655444 45 789996652 345789999999999998776666666666666678877763 68
Q ss_pred HHHHHHHHHhhcC
Q psy16939 160 QSFLKNAQTMLND 172 (174)
Q Consensus 160 ~~l~~al~~ll~~ 172 (174)
++|.+++.++++|
T Consensus 334 ~~La~ai~~ll~d 346 (374)
T 2xci_A 334 TELVTKLTELLSV 346 (374)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhH
Confidence 9999999999976
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00038 Score=56.19 Aligned_cols=127 Identities=8% Similarity=-0.089 Sum_probs=77.5
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCC-----CccccccCCCCCEE-EeecCCch---hhhcC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITN-----DPVLNAKTLPDNVF-IQKWYPQT---DILAH 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~nv~-~~~~~p~~---~~l~~ 102 (174)
+..+++..|..... -..+.+-+.+..+.+.+.++++...+.. +.++.. ..++++. +.++ +.. .++
T Consensus 291 ~~~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~-~~~~~v~~~~g~-~~~~~~~~~-- 364 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQ--KGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAA-EYPGQVGVQIGY-HEAFSHRIM-- 364 (485)
T ss_dssp TSCEEEEEEEESGG--GCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHH-HSTTTEEEEESC-CHHHHHHHH--
T ss_pred CCeEEEEeccCccc--cCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHH-hCCCcEEEeCCC-CHHHHHHHH--
Confidence 35677777876531 1233333333333333567776654431 111111 2357886 7777 433 345
Q ss_pred CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHc---------CceeEecCCCCCHHHHHHHHHHh
Q psy16939 103 PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR---------GYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 103 ~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~---------G~g~~l~~~~~~~~~l~~al~~l 169 (174)
..+|++|.- |-..++.||+++|+|+|+-... .....+.+- +.|..++.. +.+++.++|.++
T Consensus 365 ~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~l 438 (485)
T 2qzs_A 365 GGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIRRA 438 (485)
T ss_dssp HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHHHH
T ss_pred HhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECCC--CHHHHHHHHHHH
Confidence 779999954 3457899999999999987542 233334433 678888643 689999999999
Q ss_pred h
Q psy16939 170 L 170 (174)
Q Consensus 170 l 170 (174)
+
T Consensus 439 l 439 (485)
T 2qzs_A 439 F 439 (485)
T ss_dssp H
T ss_pred H
Confidence 8
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.004 Score=54.02 Aligned_cols=128 Identities=8% Similarity=-0.010 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCC-----CcEEEEecCCC-----------Ccc----ccccCCCCCEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLK-----LPIFWKIDITN-----------DPV----LNAKTLPDNVFIQ 91 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~-----~~~i~~~~~~~-----------~~~----~~~~~~~~nv~~~ 91 (174)
.+.+++..|.... ..-+..++++++... .++++..++.. ..+ ..+..+.+++.+.
T Consensus 571 ~~~vIl~vGRl~~-----~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 571 KKPILFTMARLDR-----VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp TSCEEEEECCCCT-----TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CCeEEEEEccCcc-----cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4678888888754 233555666665553 35666554441 011 1111356789999
Q ss_pred ecCC----chhhhcC-C-CccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHH
Q psy16939 92 KWYP----QTDILAH-P-NLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQS 161 (174)
Q Consensus 92 ~~~p----~~~~l~~-~-~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~ 161 (174)
++.+ ..++... . .+|++|.- |-..++.||+++|+|+|+-...+ ....+.+-..|+.++.. +.++
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG----~~EiV~dg~~Gllv~p~--D~e~ 719 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVHGKSGFHIDPY--HGDQ 719 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBT----HHHHCCBTTTBEEECTT--SHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCC----hHHHHccCCcEEEeCCC--CHHH
Confidence 8654 3444321 2 57899964 44679999999999999964322 23344455678888654 6788
Q ss_pred HHHHHHHhh
Q psy16939 162 FLKNAQTML 170 (174)
Q Consensus 162 l~~al~~ll 170 (174)
+.++|.+++
T Consensus 720 LA~aI~~lL 728 (816)
T 3s28_A 720 AADTLADFF 728 (816)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887665
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0086 Score=46.63 Aligned_cols=114 Identities=12% Similarity=0.041 Sum_probs=74.0
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhcC-CCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILAH-PNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~ 110 (174)
.+.+++-.|+.... ..+.+ + ..+.++++...+.. . ..+ |+.+.+++|..++..+ .++|..+.
T Consensus 177 ~~~~i~yaG~l~k~-----~~L~~----l-~~~~~f~ivG~G~~-~-----~l~-nV~f~G~~~~~el~~~l~~~~~~lv 239 (339)
T 3rhz_A 177 LKREIHFPGNPERF-----SFVKE----W-KYDIPLKVYTWQNV-E-----LPQ-NVHKINYRPDEQLLMEMSQGGFGLV 239 (339)
T ss_dssp EEEEEEECSCTTTC-----GGGGG----C-CCSSCEEEEESCCC-C-----CCT-TEEEEECCCHHHHHHHHHTEEEEEC
T ss_pred CCcEEEEeCCcchh-----hHHHh----C-CCCCeEEEEeCCcc-c-----CcC-CEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 34677778887641 11111 1 12456666554433 2 345 9999999998876432 34555555
Q ss_pred c--CC---------hhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhh
Q psy16939 111 H--GG---------ISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTML 170 (174)
Q Consensus 111 h--gG---------~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll 170 (174)
. +. .+-+.|++++|+|+|+.+ ...++..+++.++|+.++ +.+++.+++.++.
T Consensus 240 ~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~~----~~~e~~~~i~~l~ 302 (339)
T 3rhz_A 240 WMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIVK----DVEEAIMKVKNVN 302 (339)
T ss_dssp CCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEES----SHHHHHHHHHHCC
T ss_pred ECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEeC----CHHHHHHHHHHhC
Confidence 4 21 245889999999999865 345777888899999985 4677777777653
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.2 Score=35.22 Aligned_cols=134 Identities=8% Similarity=0.012 Sum_probs=72.2
Q ss_pred HHHHHHHhcCCCCeEEEEcCC-CcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGS-VVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~ 99 (174)
.++-+++... +..+|+.|. .+. +....++....+-+++-..+... .+... ..-....+.++++....
T Consensus 35 ~~lg~~La~~--g~~lVsGGg~~Gi--------m~aa~~gAl~~gG~tigVlP~~~-~~~~~-~~~~~~i~~~~~~~Rk~ 102 (176)
T 2iz6_A 35 NELGKQIATH--GWILLTGGRSLGV--------MHEAMKGAKEAGGTTIGVLPGPD-TSEIS-DAVDIPIVTGLGSARDN 102 (176)
T ss_dssp HHHHHHHHHT--TCEEEEECSSSSH--------HHHHHHHHHHTTCCEEEEECC------CC-TTCSEEEECCCCSSSCC
T ss_pred HHHHHHHHHC--CCEEEECCCccCH--------hHHHHHHHHHcCCEEEEEeCchh-hhhhc-cCCceeEEcCCHHHHHH
Confidence 3455556554 588888887 543 56666666566656555554321 11100 11123445555554432
Q ss_pred hcCCCccEEE-ecCChhhHHHH---HHcCCCeEeccccchHHHHHHHHHHcCce-eEecCCCCCHHHHHHHHHHhhcC
Q psy16939 100 LAHPNLRLFI-THGGISSLMEA---SSLGVPVLGVPFFGDQYRNMVLLRHRGYA-LIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 100 l~~~~~~~~I-~hgG~~t~~ea---l~~g~P~i~vP~~~dQ~~na~~l~~~G~g-~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
+....+|.+| --||.||+-|+ +.+++|++++|.+. .....+...-.. +.+. -+++++.+.+++.+..
T Consensus 103 ~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~---~~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 103 INALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA---ADVAGAIAAVKQLLAK 174 (176)
T ss_dssp CCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE---SSHHHHHHHHHHHHHC
T ss_pred HHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc---CCHHHHHHHHHHHHHh
Confidence 2223455544 46778887665 67999999999733 222233333222 2221 1688888888877643
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.021 Score=44.48 Aligned_cols=136 Identities=13% Similarity=0.172 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cccccCCCCC-EEEeecCC---chhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VLNAKTLPDN-VFIQKWYP---QTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~~n-v~~~~~~p---~~~~l~~~~ 104 (174)
++.|.+..|+......++.+.+.++++.+.+.+.++++..++.+.+ ++.+ ..+.+ +.+.+-.+ ...++ ..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~-~~~~~~~~l~g~~sl~e~~ali--~~ 261 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE-QMETKPIVATGKFQLGPLAAAM--NR 261 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH-TCSSCCEECTTCCCHHHHHHHH--HT
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH-hcccccEEeeCCCCHHHHHHHH--Hh
Confidence 6889999998655556888999999999887788887744433321 1111 22222 22222222 33455 67
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEec--cccchH-------------HHHHHHHHH---cCc--eeEecCCCCCHHHHHH
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGV--PFFGDQ-------------YRNMVLLRH---RGY--ALIEPIQTLTKQSFLK 164 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ-------------~~na~~l~~---~G~--g~~l~~~~~~~~~l~~ 164 (174)
||++|+.-. |.++=|.+.|+|+|.+ |..... ...+. +.. ..+ +-.---++.+++++.+
T Consensus 262 a~~~i~~Ds-G~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~ 339 (349)
T 3tov_A 262 CNLLITNDS-GPMHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIK 339 (349)
T ss_dssp CSEEEEESS-HHHHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHH
T ss_pred CCEEEECCC-CHHHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHH
Confidence 999999854 3455588899999998 431111 11122 222 112 1000124679999999
Q ss_pred HHHHhhcC
Q psy16939 165 NAQTMLND 172 (174)
Q Consensus 165 al~~ll~~ 172 (174)
+++++|..
T Consensus 340 a~~~lL~~ 347 (349)
T 3tov_A 340 AAETLLLE 347 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999864
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.022 Score=43.76 Aligned_cols=95 Identities=7% Similarity=0.038 Sum_probs=61.4
Q ss_pred CCeEEEEcCC-CcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cccccCCC----CCE-EEeecCC---chhh
Q psy16939 32 GGFVYMSFGS-VVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VLNAKTLP----DNV-FIQKWYP---QTDI 99 (174)
Q Consensus 32 ~~~v~vs~Gs-~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~----~nv-~~~~~~p---~~~~ 99 (174)
++.|.+..|+ ......++.+.+.++++.|.+.+.++++..++.+.+ ++.+ ..+ .++ .+.+..+ ...+
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~-~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILA-ALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHT-TSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHH-hhhhccccceEeccCcCCHHHHHHH
Confidence 5789999998 323234788899999999887788887754443311 1111 122 233 2233332 2445
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEec
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGV 130 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v 130 (174)
+ ..||++|+.-. |+++-|.+.|+|+|.+
T Consensus 259 i--~~a~l~I~~Ds-g~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 259 I--AACKAIVTNDS-GLMHVAAALNRPLVAL 286 (348)
T ss_dssp H--HTSSEEEEESS-HHHHHHHHTTCCEEEE
T ss_pred H--HhCCEEEecCC-HHHHHHHHcCCCEEEE
Confidence 6 67999999853 5677788999999988
|
| >1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=95.02 E-value=0.46 Score=33.91 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=51.4
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe--ecCC-chh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ--KWYP-QTD 98 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~--~~~p-~~~ 98 (174)
++-+++.+. +..+|+.|..+ ++....++....+-+++-+...+... .......+. ..++ ...
T Consensus 49 ~lg~~LA~~--G~~vVsGg~~G--------iM~aa~~gAl~~GG~~iGVlP~e~~~-----~~~~~~~~~~~~~f~~Rk~ 113 (195)
T 1rcu_A 49 ELGRTLAKK--GYLVFNGGRDG--------VMELVSQGVREAGGTVVGILPDEEAG-----NPYLSVAVKTGLDFQMRSF 113 (195)
T ss_dssp HHHHHHHHT--TCEEEECCSSH--------HHHHHHHHHHHTTCCEEEEESTTCCC-----CTTCSEEEECCCCHHHHHH
T ss_pred HHHHHHHHC--CCEEEeCCHHH--------HHHHHHHHHHHcCCcEEEEeCCcccC-----CCCcceeeecCCCHHHHHH
Confidence 444455543 56777744333 46666666655555555555442111 111334443 2333 333
Q ss_pred hhcCCCccE-EEecCChhhHHH---HHHcCCCeEeccc
Q psy16939 99 ILAHPNLRL-FITHGGISSLME---ASSLGVPVLGVPF 132 (174)
Q Consensus 99 ~l~~~~~~~-~I~hgG~~t~~e---al~~g~P~i~vP~ 132 (174)
++. ..+|+ ++--||.||+-| ++.+++|+++++.
T Consensus 114 ~m~-~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 114 VLL-RNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHH-HhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 333 34554 445788888766 4779999999963
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.05 Score=41.51 Aligned_cols=130 Identities=12% Similarity=0.085 Sum_probs=80.4
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCC-CC---ccccccCCCCCEEEeecCC---chhhhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDIT-ND---PVLNAKTLPDNVFIQKWYP---QTDILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~-~~---~~~~~~~~~~nv~~~~~~p---~~~~l~~~~ 104 (174)
++.|.+..|+......++.+.+.++++.|.+.++++++..++. +. .++.+ .. +++.+.+-.+ ...++ ..
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~-~~-~~~~l~g~~sl~el~ali--~~ 253 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAE-GF-AYVEVLPKMSLEGVARVL--AG 253 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHT-TC-TTEEECCCCCHHHHHHHH--HT
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHh-hC-CcccccCCCCHHHHHHHH--Hh
Confidence 5789999988765556888999999999877777877754432 21 11111 12 2444444333 33455 67
Q ss_pred ccEEEecCChhhHHHHHHcCCCeEec--cccchHHHHHHHHHHcCc-eeEec-----CCCCCHHHHHHHHHHhhcC
Q psy16939 105 LRLFITHGGISSLMEASSLGVPVLGV--PFFGDQYRNMVLLRHRGY-ALIEP-----IQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 105 ~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~~na~~l~~~G~-g~~l~-----~~~~~~~~l~~al~~ll~~ 172 (174)
||++|+.-.. +++=|.+.|+|++.+ |..... ++- .|- ...+. -++.+++++.+++++++++
T Consensus 254 a~l~I~~DSG-~~HlAaa~g~P~v~lfg~t~p~~--~~P----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 254 AKFVVSVDTG-LSHLTAALDRPNITVYGPTDPGL--IGG----YGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp CSEEEEESSH-HHHHHHHTTCCEEEEESSSCHHH--HCC----CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred CCEEEecCCc-HHHHHHHcCCCEEEEECCCChhh--cCC----CCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9999999543 344466799999998 432221 100 111 11121 2357899999999999875
|
| >1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A | Back alignment and structure |
|---|
Probab=94.06 E-value=0.38 Score=34.91 Aligned_cols=135 Identities=10% Similarity=0.023 Sum_probs=72.0
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~~ 99 (174)
.++-+++... +..+|+.|+.. .++....++....+-+++=.......+. ... +.-.++.+..+++....
T Consensus 31 ~~lg~~LA~~--g~~lV~GGg~~-------GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~-~~~~~~~~~~~~~~Rk~ 100 (216)
T 1ydh_A 31 IELGNELVKR--KIDLVYGGGSV-------GLMGLISRRVYEGGLHVLGIIPKALMPIEISG-ETVGDVRVVADMHERKA 100 (216)
T ss_dssp HHHHHHHHHT--TCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCS-SCCSEEEEESSHHHHHH
T ss_pred HHHHHHHHHC--CCEEEECCCcc-------cHhHHHHHHHHHcCCcEEEEechhcCcccccc-CCCCcccccCCHHHHHH
Confidence 3455555554 57778877652 2467777776666666555443211110 000 11223555555543332
Q ss_pred hcCCCccEE-EecCChhhHHHHH---------HcCCCeEeccc--cchHHH-HHHHHHHcCce-------eEecCCCCCH
Q psy16939 100 LAHPNLRLF-ITHGGISSLMEAS---------SLGVPVLGVPF--FGDQYR-NMVLLRHRGYA-------LIEPIQTLTK 159 (174)
Q Consensus 100 l~~~~~~~~-I~hgG~~t~~eal---------~~g~P~i~vP~--~~dQ~~-na~~l~~~G~g-------~~l~~~~~~~ 159 (174)
+....+|++ +--||.||+-|.. .+++|++++-. +++... .-..+.+.|.- +.+. -++
T Consensus 101 ~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~---d~~ 177 (216)
T 1ydh_A 101 AMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSA---PTA 177 (216)
T ss_dssp HHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEE---SSH
T ss_pred HHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEe---CCH
Confidence 211345555 5578899988876 47999999953 333322 22445555541 1221 167
Q ss_pred HHHHHHHHH
Q psy16939 160 QSFLKNAQT 168 (174)
Q Consensus 160 ~~l~~al~~ 168 (174)
+++.+.+++
T Consensus 178 ee~~~~l~~ 186 (216)
T 1ydh_A 178 KELMEKMEE 186 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777764
|
| >1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=93.23 E-value=1.2 Score=32.38 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=63.6
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEE---ecCCCCccccccCCCCCEEEeecCCchh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWK---IDITNDPVLNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~---~~~~~~~~~~~~~~~~nv~~~~~~p~~~ 98 (174)
++-+++... +..+|+.|..+ .+....++....+-+++-. ...++.. . ..-......++++...
T Consensus 60 ~lg~~La~~--g~~lVsGGg~G--------iM~aa~~gAl~~gG~~iGV~~~~P~~~~~---~-~~~t~~~~~~~f~~Rk 125 (217)
T 1wek_A 60 RLGRALAEA--GFGVVTGGGPG--------VMEAVNRGAYEAGGVSVGLNIELPHEQKP---N-PYQTHALSLRYFFVRK 125 (217)
T ss_dssp HHHHHHHHH--TCEEEECSCSH--------HHHHHHHHHHHTTCCEEEEEECCTTCCCC---C-SCCSEEEEESCHHHHH
T ss_pred HHHHHHHHC--CCEEEeCChhh--------HHHHHHHHHHHcCCCEEEEeeCCcchhhc---c-ccCCcCcccCCHHHHH
Confidence 444445443 57777777643 3556666555555444433 2211111 0 1112223344444333
Q ss_pred -hhcCCCccEE-EecCChhhHHHHHH----------cCCCeEeccc-cchHH-HHHHHHHHcCce-------eEecCCCC
Q psy16939 99 -ILAHPNLRLF-ITHGGISSLMEASS----------LGVPVLGVPF-FGDQY-RNMVLLRHRGYA-------LIEPIQTL 157 (174)
Q Consensus 99 -~l~~~~~~~~-I~hgG~~t~~eal~----------~g~P~i~vP~-~~dQ~-~na~~l~~~G~g-------~~l~~~~~ 157 (174)
++. ..+|.+ +--||.||+-|... +++|++++-. ++|.. .+-..+.+.|.- +.+. -
T Consensus 126 ~~m~-~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~---~ 201 (217)
T 1wek_A 126 VLFV-RYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYWEGLVRWLAFLRDQKAVGPEDLQLFRLT---D 201 (217)
T ss_dssp HHHH-HTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHHHHHHHHHHHHHHTTSSCTTGGGGSEEE---S
T ss_pred HHHH-HhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcccchhHHHHHHHHHHCCCCCHHHcCeEEEe---C
Confidence 232 446655 45788999887643 4799999853 11111 112444455532 1111 1
Q ss_pred CHHHHHHHHHH
Q psy16939 158 TKQSFLKNAQT 168 (174)
Q Consensus 158 ~~~~l~~al~~ 168 (174)
+++++.+.+++
T Consensus 202 ~~~e~~~~l~~ 212 (217)
T 1wek_A 202 EPEEVVQALKA 212 (217)
T ss_dssp CHHHHHHHHHC
T ss_pred CHHHHHHHHHH
Confidence 67777777654
|
| >3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M} | Back alignment and structure |
|---|
Probab=93.07 E-value=1.1 Score=31.86 Aligned_cols=117 Identities=15% Similarity=0.064 Sum_probs=59.1
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchhhh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTDIL 100 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~~l 100 (174)
++-+++... +..+|+.|+.. .+++...++....+-+++=........+ ... ..-......+++.....+
T Consensus 35 ~lg~~la~~--g~~lv~GGG~~-------GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~-~~~~~~i~~~~~~~Rk~~ 104 (189)
T 3sbx_A 35 AVGAAIAAR--GWTLVWGGGHV-------SAMGAVSSAARAHGGWTVGVIPKMLVHRELAD-HDADELVVTETMWERKQV 104 (189)
T ss_dssp HHHHHHHHT--TCEEEECCBCS-------HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBC-TTCSEEEEESSHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEcCchhhhcccCC-CCCCeeEEcCCHHHHHHH
Confidence 444455443 46667666541 2466667766666655554443311110 000 111334455554333222
Q ss_pred cCCCccEEE-ecCChhhHHHHHH---------cCCCeEeccc--cchHHH-HHHHHHHcCc
Q psy16939 101 AHPNLRLFI-THGGISSLMEASS---------LGVPVLGVPF--FGDQYR-NMVLLRHRGY 148 (174)
Q Consensus 101 ~~~~~~~~I-~hgG~~t~~eal~---------~g~P~i~vP~--~~dQ~~-na~~l~~~G~ 148 (174)
....+|++| --||.||+-|... +++|++++-. ++|... +-+.+.+.|.
T Consensus 105 m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gf 165 (189)
T 3sbx_A 105 MEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGY 165 (189)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTS
T ss_pred HHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCC
Confidence 224567665 5678999988752 5899999942 333322 2234555553
|
| >3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=91.56 E-value=0.63 Score=33.34 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=49.4
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-cccccCCCCCEEEeecCCchhhh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-VLNAKTLPDNVFIQKWYPQTDIL 100 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~nv~~~~~~p~~~~l 100 (174)
++-+++.+. +..+|+.|+.. .++....++....+-+++=........ +... ..-....+.+++.....+
T Consensus 44 ~lg~~La~~--g~~lV~GGG~~-------GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~-~~~~~~i~~~~~~~Rk~~ 113 (199)
T 3qua_A 44 EVGSSIAAR--GWTLVSGGGNV-------SAMGAVAQAARAKGGHTVGVIPKALVHRELAD-VDAAELIVTDTMRERKRE 113 (199)
T ss_dssp HHHHHHHHT--TCEEEECCBCS-------HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBC-TTSSEEEEESSHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEeCchhhhccccC-CCCCeeEEcCCHHHHHHH
Confidence 333444433 45556655431 135555665555555444433321101 0000 111345555554433222
Q ss_pred cCCCccEEE-ecCChhhHHHHHH---------cCCCeEecc
Q psy16939 101 AHPNLRLFI-THGGISSLMEASS---------LGVPVLGVP 131 (174)
Q Consensus 101 ~~~~~~~~I-~hgG~~t~~eal~---------~g~P~i~vP 131 (174)
....+|++| --||.||+-|... +++|++++-
T Consensus 114 m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 114 MEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 114466554 5788999888743 599999984
|
| >1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=91.24 E-value=2.5 Score=29.85 Aligned_cols=135 Identities=9% Similarity=-0.020 Sum_probs=72.0
Q ss_pred hHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchh
Q psy16939 20 LSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTD 98 (174)
Q Consensus 20 ~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~ 98 (174)
..++-+++... +..+|+.|+.. ..+....++....+-+++=........+ ... ..-.+....++++...
T Consensus 22 A~~lg~~La~~--g~~lV~GGg~~-------GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~-~~~~~~~~~~~~~~Rk 91 (191)
T 1t35_A 22 AAELGVYMAEQ--GIGLVYGGSRV-------GLMGTIADAIMENGGTAIGVMPSGLFSGEVVH-QNLTELIEVNGMHERK 91 (191)
T ss_dssp HHHHHHHHHHT--TCEEEECCCCS-------HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTT-CCCSEEEEESHHHHHH
T ss_pred HHHHHHHHHHC--CCEEEECCCcc-------cHHHHHHHHHHHcCCeEEEEeCchhccccccc-CCCCccccCCCHHHHH
Confidence 34555566554 58888887652 2477777777666666665554322111 000 1123344455554333
Q ss_pred -hhcCCCccEE-EecCChhhHHHH---H------HcCCCeEeccc--cchHHH-HHHHHHHcCce-------eEecCCCC
Q psy16939 99 -ILAHPNLRLF-ITHGGISSLMEA---S------SLGVPVLGVPF--FGDQYR-NMVLLRHRGYA-------LIEPIQTL 157 (174)
Q Consensus 99 -~l~~~~~~~~-I~hgG~~t~~ea---l------~~g~P~i~vP~--~~dQ~~-na~~l~~~G~g-------~~l~~~~~ 157 (174)
++. ..+|.+ +--||.||+-|. + .+++|++++-. +.|... .-..+.+.|.- +.+. -
T Consensus 92 ~~~~-~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~---~ 167 (191)
T 1t35_A 92 AKMS-ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSS---S 167 (191)
T ss_dssp HHHH-HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEE---S
T ss_pred HHHH-HHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEe---C
Confidence 332 345554 557889998775 4 27899999953 233222 22345555521 2221 1
Q ss_pred CHHHHHHHHHH
Q psy16939 158 TKQSFLKNAQT 168 (174)
Q Consensus 158 ~~~~l~~al~~ 168 (174)
+++++.+.+++
T Consensus 168 ~~~e~~~~l~~ 178 (191)
T 1t35_A 168 RPDELIEQMQN 178 (191)
T ss_dssp SHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 67777777654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=90.87 E-value=0.48 Score=38.98 Aligned_cols=97 Identities=8% Similarity=-0.023 Sum_probs=58.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-c---ccccCCCCCEEEeecCCchh---hhcCCC
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP-V---LNAKTLPDNVFIQKWYPQTD---ILAHPN 104 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~-~---~~~~~~~~nv~~~~~~p~~~---~l~~~~ 104 (174)
+.++++..|..... ...+.+-+.+..+.+.+.++++...+.... . ......+.++.+....+... ++ ..
T Consensus 326 ~~p~i~~vgRl~~~--Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~ 401 (536)
T 3vue_A 326 KIPLIAFIGRLEEQ--KGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM--AG 401 (536)
T ss_dssp TSCEEEEECCBSGG--GCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH--HH
T ss_pred CCcEEEEEeecccc--CChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH--Hh
Confidence 45677778887542 133333333333444455666655443211 0 01114567888888877543 44 67
Q ss_pred ccEEEecC----ChhhHHHHHHcCCCeEeccc
Q psy16939 105 LRLFITHG----GISSLMEASSLGVPVLGVPF 132 (174)
Q Consensus 105 ~~~~I~hg----G~~t~~eal~~g~P~i~vP~ 132 (174)
||+++.-. =..+++||+++|+|+|+-..
T Consensus 402 aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~ 433 (536)
T 3vue_A 402 ADVLAVPSRFEPCGLIQLQGMRYGTPCACAST 433 (536)
T ss_dssp CSEEEECCSCCSSCSHHHHHHHTTCCEEECSC
T ss_pred hheeecccccCCCCHHHHHHHHcCCCEEEcCC
Confidence 99999752 23589999999999998643
|
| >2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* | Back alignment and structure |
|---|
Probab=88.39 E-value=0.46 Score=35.57 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=26.4
Q ss_pred CCccEEEecCChhhHHHHHHc------CCCeEeccc
Q psy16939 103 PNLRLFITHGGISSLMEASSL------GVPVLGVPF 132 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~------g~P~i~vP~ 132 (174)
..+|++|+=||-||+.+++.. ++|++.+|.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 468999999999999998764 889999975
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=88.29 E-value=1.7 Score=33.69 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=50.8
Q ss_pred CeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEee-----------cC--C---
Q psy16939 33 GFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQK-----------WY--P--- 95 (174)
Q Consensus 33 ~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~-----------~~--p--- 95 (174)
+.|+++.|+.+. -..-...+++.|.+.+++++|......++. +.. ...-.++..+ ++ +
T Consensus 3 ~~i~i~~GGTgG----Hi~palala~~L~~~g~~V~~vg~~~g~e~~~v~-~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 77 (365)
T 3s2u_A 3 GNVLIMAGGTGG----HVFPALACAREFQARGYAVHWLGTPRGIENDLVP-KAGLPLHLIQVSGLRGKGLKSLVKAPLEL 77 (365)
T ss_dssp CEEEEECCSSHH----HHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG-GGTCCEEECC--------------CHHHH
T ss_pred CcEEEEcCCCHH----HHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh-hcCCcEEEEECCCcCCCCHHHHHHHHHHH
Confidence 456666654421 122356788889888999998875543221 000 0000111111 00 0
Q ss_pred ------chhhhcCCCccEEEecCChhhH---HHHHHcCCCeEec
Q psy16939 96 ------QTDILAHPNLRLFITHGGISSL---MEASSLGVPVLGV 130 (174)
Q Consensus 96 ------~~~~l~~~~~~~~I~hgG~~t~---~eal~~g~P~i~v 130 (174)
...++..-+-|++|++||+-+. ..|...|+|.++.
T Consensus 78 ~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 78 LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 0112322468999999998765 4567789999975
|
| >2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A | Back alignment and structure |
|---|
Probab=86.72 E-value=7.1 Score=28.11 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=65.3
Q ss_pred HHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCCchh-hh
Q psy16939 23 LQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYPQTD-IL 100 (174)
Q Consensus 23 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p~~~-~l 100 (174)
+-+++... +..+|+.|... ..+....++....+-+++=......... +.. .......+..+++... ++
T Consensus 37 lg~~LA~~--G~~vVsGGg~~-------GiM~aa~~gAl~~GG~tiGVlP~~~~~~e~~~-~~~~~~~~~~~f~~Rk~~~ 106 (215)
T 2a33_A 37 LGNELVSR--NIDLVYGGGSI-------GLMGLVSQAVHDGGRHVIGIIPKTLMPRELTG-ETVGEVRAVADMHQRKAEM 106 (215)
T ss_dssp HHHHHHHT--TCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEESSCC---------CCEEEEESSHHHHHHHH
T ss_pred HHHHHHHC--CCEEEECCChh-------hHhHHHHHHHHHcCCcEEEEcchHhcchhhcc-CCCCceeecCCHHHHHHHH
Confidence 33444443 57777777641 1356666665556555554444322211 100 1112234455554333 22
Q ss_pred cCCCccEE-EecCChhhHHHHHH---------cCCCeEeccc--cchHHHH-HHHHHHcCce-------eEecCCCCCHH
Q psy16939 101 AHPNLRLF-ITHGGISSLMEASS---------LGVPVLGVPF--FGDQYRN-MVLLRHRGYA-------LIEPIQTLTKQ 160 (174)
Q Consensus 101 ~~~~~~~~-I~hgG~~t~~eal~---------~g~P~i~vP~--~~dQ~~n-a~~l~~~G~g-------~~l~~~~~~~~ 160 (174)
. ..+|.+ +--||.||+-|... +++|++++-. ++|...+ ...+.+.|.- +.+. -+++
T Consensus 107 ~-~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~---d~~e 182 (215)
T 2a33_A 107 A-KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSA---PTAK 182 (215)
T ss_dssp H-HTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEE---SSHH
T ss_pred H-HhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEe---CCHH
Confidence 2 345554 46888999988762 4899999853 3333222 2333444431 1111 1677
Q ss_pred HHHHHHHH
Q psy16939 161 SFLKNAQT 168 (174)
Q Consensus 161 ~l~~al~~ 168 (174)
++.+.+++
T Consensus 183 e~~~~l~~ 190 (215)
T 2a33_A 183 ELVKKLEE 190 (215)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 77777654
|
| >1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=84.34 E-value=0.82 Score=33.92 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=38.6
Q ss_pred CCccEEEecCChhhHHHHHHc---CCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITHGGISSLMEASSL---GVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~---g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|++|+=||-||+.+++.. ++|++.++. +. .|.-. ++.++++.++++.+++.
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~----------~Gfl~-----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR----------LGFLT-----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS----------CCSSC-----CBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC----------CCccC-----cCCHHHHHHHHHHHHcC
Confidence 468999999999999999876 889988873 21 12111 23566777777777654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=82.56 E-value=5.6 Score=29.07 Aligned_cols=76 Identities=9% Similarity=0.034 Sum_probs=48.7
Q ss_pred CeEEEEcCCC----------cCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCchhhhc-
Q psy16939 33 GFVYMSFGSV----------VDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTDILA- 101 (174)
Q Consensus 33 ~~v~vs~Gs~----------~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~- 101 (174)
+.|+||.|+. .+ .-+..+-..+++++...|+.|++..++..+.. ..+.++.+.+.-.-.+++.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN--~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~~~~~~~~~v~s~~em~~~ 77 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITN--HSTGHLGKIITETLLSAGYEVCLITTKRALKP----EPHPNLSIREITNTKDLLIE 77 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEE--CCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CCCTTEEEEECCSHHHHHHH
T ss_pred CEEEEeCCCcccccCceeeccC--CCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCCCeEEEEHhHHHHHHHH
Confidence 6789999841 00 00123567788899999999999888755431 2245677777654332221
Q ss_pred ----CCCccEEEecCCh
Q psy16939 102 ----HPNLRLFITHGGI 114 (174)
Q Consensus 102 ----~~~~~~~I~hgG~ 114 (174)
.+.+|++|+.++.
T Consensus 78 v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 78 MQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHGGGCSEEEECSBC
T ss_pred HHHhcCCCCEEEEcCcc
Confidence 1579999999884
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 174 | ||||
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 1e-19 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 2e-18 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 7e-18 | |
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 9e-17 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 2e-16 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 3e-15 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 6e-15 |
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 82.5 bits (202), Expect = 1e-19
Identities = 22/139 (15%), Positives = 38/139 (27%), Gaps = 9/139 (6%)
Query: 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWY 94
VY+ FGS+ P ++ + + + + F
Sbjct: 241 VYLGFGSLGAPADAVRV----AIDAIRAHGRRVILSRGWADLV---LPDDGADCFAIGEV 293
Query: 95 PQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154
+ + I HGG + A+ G P + +P DQ + G +
Sbjct: 294 NHQVLFGR--VAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDG 351
Query: 155 QTLTKQSFLKNAQTMLNDP 173
T S T L
Sbjct: 352 PIPTFDSLSAALATALTPE 370
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 79.0 bits (193), Expect = 2e-18
Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 7/139 (5%)
Query: 35 VYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWY 94
V++ FGS + +E + + L D+ F
Sbjct: 240 VHIGFGSSSGRGI--ADAAKVAVEAIRAQGRRVIL---SRGWTELVLPDDRDDCFAIDEV 294
Query: 95 PQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPI 154
+ + I HG + A+ GVP L +P DQ + G +
Sbjct: 295 NFQALFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDG 352
Query: 155 QTLTKQSFLKNAQTMLNDP 173
T T +S T+L
Sbjct: 353 PTPTFESLSAALTTVLAPE 371
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 77.9 bits (190), Expect = 7e-18
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLP---DNVFI 90
VY+SFG+V P + E + ++P W + L L +
Sbjct: 267 VVYISFGTVTTP---PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMV 323
Query: 91 QKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL-RHRGYA 149
W PQ ++LAH + F+TH G +SL E+ + GVP++ PFFGDQ N ++
Sbjct: 324 VPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 383
Query: 150 LIEPIQTLTKQSFLKNAQTMLNDPR 174
+ TK + +L+ +
Sbjct: 384 VRIEGGVFTKSGLMSCFDQILSQEK 408
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 74.4 bits (181), Expect = 9e-17
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 10/160 (6%)
Query: 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA 81
L G VY++FGS ++ E L F K W I +
Sbjct: 278 CLDWLESKEPGSVVYVNFGSTT---VMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSV 334
Query: 82 K-------TLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFG 134
+ D I W PQ +L HP++ F+TH G +S E+ GVP+L PFF
Sbjct: 335 IFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 394
Query: 135 DQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDPR 174
DQ + + + +E + ++ K ++ +
Sbjct: 395 DQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDK 434
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 73.2 bits (178), Expect = 2e-16
Identities = 27/113 (23%), Positives = 44/113 (38%)
Query: 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKW 93
F+ V E LG + + + + L L I W
Sbjct: 278 FLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGW 337
Query: 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHR 146
PQ ++LAH + F++H G +S++E+ GVP+L P + +Q N L
Sbjct: 338 APQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE 390
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 70.2 bits (170), Expect = 3e-15
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 82 KTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMV 141
+T I W PQ +LAHP+ F+TH G +S +E+ G+P++ P + +Q N V
Sbjct: 330 RTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 389
Query: 142 LLRHR 146
LL
Sbjct: 390 LLSED 394
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 69.3 bits (168), Expect = 6e-15
Identities = 16/139 (11%), Positives = 36/139 (25%), Gaps = 9/139 (6%)
Query: 39 FGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQTD 98
G + + ++ + I + + + + F+ +
Sbjct: 226 VGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLPD---DGADCFVVGEVNLQE 282
Query: 99 ILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGD----QYRNMVLLRHRGYALIEPI 154
+ + I H + + A G+P + V D Q + + G +
Sbjct: 283 LFGR--VAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDG 340
Query: 155 QTLTKQSFLKNAQTMLNDP 173
T S T L
Sbjct: 341 PVPTIDSLSAALDTALAPE 359
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 174 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 99.97 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 99.97 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 99.96 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.96 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.96 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.95 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.94 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.77 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.3 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 98.02 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.43 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.97 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 96.84 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 95.83 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 95.65 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 93.71 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 92.57 | |
| d2q4oa1 | 183 | Hypothetical protein At2g37210/T2N18.3 {Thale cres | 91.67 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 90.64 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 90.53 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 88.61 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 83.45 | |
| d1weka_ | 208 | Hypothetical protein TT1465 (TTHA1644) {Thermus th | 82.84 | |
| d1weha_ | 171 | Hypothetical protein TT1887 (TTHA0294) {Thermus th | 81.29 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=99.97 E-value=1.4e-31 Score=213.49 Aligned_cols=151 Identities=25% Similarity=0.412 Sum_probs=132.2
Q ss_pred hHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccc---cCCCCCEEEeecCC
Q psy16939 20 LSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNA---KTLPDNVFIQKWYP 95 (174)
Q Consensus 20 ~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~---~~~~~nv~~~~~~p 95 (174)
++++..|+...+ +++||+++||... ...+.+.+++.+++..+++|+|.........+.+ ...+.|+.+.+|+|
T Consensus 252 ~~~~~~~~~~~~~~~~v~~s~gs~~~---~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~p 328 (450)
T d2c1xa1 252 TTGCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAP 328 (450)
T ss_dssp --CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCC
T ss_pred hhhhccccccCCccceeeeccccccc---CCHHHHHHHHHHHHhcCCeEEEEECCCccccCChhhhhhccccccccccCC
Confidence 456788988877 8999999999976 6789999999999999999999976533221100 03477999999999
Q ss_pred chhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 96 QTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 96 ~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|.++|.|+++++||||||+||++||+++|||||++|+++||+.||.++++ .|+|+.++.++++.++|.++|+++|+|+
T Consensus 329 q~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~ 407 (450)
T d2c1xa1 329 QAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE 407 (450)
T ss_dssp HHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred hHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999986 6999999999999999999999999986
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=99.97 E-value=6.9e-31 Score=209.65 Aligned_cols=149 Identities=24% Similarity=0.418 Sum_probs=128.1
Q ss_pred HHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc----cc---ccCCCCCEEEee
Q psy16939 21 SDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV----LN---AKTLPDNVFIQK 92 (174)
Q Consensus 21 ~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~----~~---~~~~~~nv~~~~ 92 (174)
.+...|+.... .+++|+++||... ...+..++++++++..+.+|+|+.+...... +. ....+.|+++.+
T Consensus 276 ~~~~~~~~~~~~~~~v~~~~gs~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~ 352 (473)
T d2pq6a1 276 TECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIAS 352 (473)
T ss_dssp CHHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEES
T ss_pred HHHHHHhhhcCCCceeeeccCcccc---ccHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccchhhccCceEEee
Confidence 35666777666 7889999999876 6789999999999999999999986532211 00 002467999999
Q ss_pred cCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 93 WYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 93 ~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
|+||.++|.||++++||||||+||++||+++|||||++|+++||+.||.++++ .|+|+.++ .+++.++|.++|+++|+
T Consensus 353 ~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~-~~~t~~~l~~ai~~vl~ 431 (473)
T d2pq6a1 353 WCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIA 431 (473)
T ss_dssp CCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHT
T ss_pred eCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC-CCcCHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999954 69999998 47899999999999998
Q ss_pred CC
Q psy16939 172 DP 173 (174)
Q Consensus 172 ~~ 173 (174)
|+
T Consensus 432 d~ 433 (473)
T d2pq6a1 432 GD 433 (473)
T ss_dssp SH
T ss_pred CC
Confidence 85
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=3.7e-29 Score=199.67 Aligned_cols=153 Identities=24% Similarity=0.365 Sum_probs=129.0
Q ss_pred CChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc-------------------
Q psy16939 18 DGLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP------------------- 77 (174)
Q Consensus 18 ~~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~------------------- 77 (174)
+..+++.+|++... .+++++++|+... .....+.++...+...+.+++|..+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 324 (471)
T d2vcha1 248 TEESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLP 324 (471)
T ss_dssp ---CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSC
T ss_pred ccchhHHHHHHhcCCccccccccccccC---CCHHHHHHHHHHHHhhcCCeEEEeccccccccccccccccccchhhhCC
Confidence 34567889999877 8899999999986 467888999999999999999988653210
Q ss_pred c-ccccCCCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHH-cCceeEecCC
Q psy16939 78 V-LNAKTLPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRH-RGYALIEPIQ 155 (174)
Q Consensus 78 ~-~~~~~~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~-~G~g~~l~~~ 155 (174)
. +.....++|+++.+|+||.++|+||++++||||||+||++||+++|||||++|+++||+.||+++++ +|+|+.+...
T Consensus 325 ~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~ 404 (471)
T d2vcha1 325 PGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG 404 (471)
T ss_dssp TTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC
T ss_pred chhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecC
Confidence 0 0011245789999999999999999999999999999999999999999999999999999999955 7999998654
Q ss_pred C---CCHHHHHHHHHHhhcCC
Q psy16939 156 T---LTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 156 ~---~~~~~l~~al~~ll~~~ 173 (174)
+ ++.++|+++|+++|+|+
T Consensus 405 ~~~~~t~~~l~~ai~~vl~~~ 425 (471)
T d2vcha1 405 DDGLVRREEVARVVKGLMEGE 425 (471)
T ss_dssp TTSCCCHHHHHHHHHHHHTST
T ss_pred CCCcCCHHHHHHHHHHHhCCc
Confidence 4 79999999999999886
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.96 E-value=3.1e-29 Score=196.60 Aligned_cols=147 Identities=18% Similarity=0.093 Sum_probs=129.3
Q ss_pred CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch
Q psy16939 18 DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT 97 (174)
Q Consensus 18 ~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 97 (174)
+.++++.+|++..+ ++||+++||.... ...+..+.+++++...+..++|..+...... ...++|+++.+|+||.
T Consensus 224 ~~~~~~~~~l~~~~-~~v~~~~gs~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~~ 297 (401)
T d1rrva_ 224 PLPPELEAFLAAGS-PPVHIGFGSSSGR--GIADAAKVAVEAIRAQGRRVILSRGWTELVL---PDDRDDCFAIDEVNFQ 297 (401)
T ss_dssp CCCHHHHHHHHSSS-CCEEECCTTCCSH--HHHHHHHHHHHHHHHTTCCEEEECTTTTCCC---SCCCTTEEEESSCCHH
T ss_pred cCCHHHHHhhccCC-CeEEEECCccccC--CHHHHHHHHHHHHhhcCCeEEEecccccccc---ccCCCCEEEEeccCcH
Confidence 57788999998876 8999999998752 2356788889999999999888776544321 1678999999999999
Q ss_pred hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 98 DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 98 ~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
++| +.+|+||||||+||++||+++|+|+|++|..+||+.||+++++.|+|+.++..+++.++|.++|+++|++
T Consensus 298 ~ll--~~~~~~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~ 370 (401)
T d1rrva_ 298 ALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAP 370 (401)
T ss_dssp HHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSH
T ss_pred HHh--hhccEEEecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence 999 5699999999999999999999999999999999999999999999999999889999999999999964
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.96 E-value=5.5e-29 Score=194.51 Aligned_cols=145 Identities=17% Similarity=0.126 Sum_probs=126.1
Q ss_pred CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch
Q psy16939 18 DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT 97 (174)
Q Consensus 18 ~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 97 (174)
+.+.+...|+...+ +++|+++|+... ....+++++++++..+.+++|..+....... ..++|+++.+|+||.
T Consensus 225 ~~~~~~~~~~~~~~-~~i~~~~~~~~~----~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~---~~~~nv~~~~~~p~~ 296 (401)
T d1iira_ 225 PLSPELAAFLDAGP-PPVYLGFGSLGA----PADAVRVAIDAIRAHGRRVILSRGWADLVLP---DDGADCFAIGEVNHQ 296 (401)
T ss_dssp CCCHHHHHHHHTSS-CCEEEECC---C----CHHHHHHHHHHHHHTTCCEEECTTCTTCCCS---SCGGGEEECSSCCHH
T ss_pred ccCHHHHHhhccCC-CeEEEccCcccc----chHHHHHHHHHHHHcCCeEEEeccCCccccc---cCCCCEEEEeccCHH
Confidence 45667777877665 889999999865 7889999999999999999998776443311 578999999999999
Q ss_pred hhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 98 DILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 98 ~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
++| +.+|+||||||+||++||+++|+|+|++|+.+||+.||+++++.|+|+.++..+++.++|.++|+++|++
T Consensus 297 ~~l--~~~~~~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 297 VLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTP 369 (401)
T ss_dssp HHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred HHH--hhcCEEEecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence 999 5599999999999999999999999999999999999999999999999999999999999999999964
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.95 E-value=2.9e-28 Score=193.93 Aligned_cols=153 Identities=20% Similarity=0.338 Sum_probs=128.3
Q ss_pred ChHHHHHHHhcCC-CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCc---cc-cccCCCCCEEEeec
Q psy16939 19 GLSDLQQRADAAK-GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDP---VL-NAKTLPDNVFIQKW 93 (174)
Q Consensus 19 ~~~~~~~~~~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~---~~-~~~~~~~nv~~~~~ 93 (174)
.++++..|++..+ ..++++++|+... ..+.+.+..++.+++..+++++|........ .+ .....+.|+.+..|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~ 337 (461)
T d2acva1 260 QHDLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGW 337 (461)
T ss_dssp HHHHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESS
T ss_pred CcHHHHHHHhhCCccceeeeecccccc--CCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhccCCCeEEEec
Confidence 3456788888876 6778888888765 3578999999999999999999987653311 11 00135789999999
Q ss_pred CCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHH-HHcCceeEecCCC------CCHHHHHHHH
Q psy16939 94 YPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLL-RHRGYALIEPIQT------LTKQSFLKNA 166 (174)
Q Consensus 94 ~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l-~~~G~g~~l~~~~------~~~~~l~~al 166 (174)
.||.+++.|+++++||||||+||++||+++|||||++|+++||+.||+++ ++.|+|+.++... +|.++|++++
T Consensus 338 ~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~ 417 (461)
T d2acva1 338 APQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGL 417 (461)
T ss_dssp CCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHH
T ss_pred CCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 5689999986543 7999999999
Q ss_pred HHhhcCC
Q psy16939 167 QTMLNDP 173 (174)
Q Consensus 167 ~~ll~~~ 173 (174)
+++|+++
T Consensus 418 ~~vl~~d 424 (461)
T d2acva1 418 KDLMDKD 424 (461)
T ss_dssp HHHTCTT
T ss_pred HHHhhCC
Confidence 9999754
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.94 E-value=2.3e-26 Score=179.56 Aligned_cols=157 Identities=15% Similarity=0.100 Sum_probs=131.0
Q ss_pred ccccCCcccc----CChHHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccC
Q psy16939 8 AVKLCSMCFI----DGLSDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKT 83 (174)
Q Consensus 8 ~~~~~g~~~~----~~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~ 83 (174)
..+..|+... +.++++..|....+ +.+++++|+.... ........+++++...+.+++|......... ..
T Consensus 194 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~ 267 (391)
T d1pn3a_ 194 GTVQTGAWILPDERPLSAELEAFLAAGS-TPVYVGFGSSSRP--ATADAAKMAIKAVRASGRRIVLSRGWADLVL---PD 267 (391)
T ss_dssp SCCBCCCCCCCCCCCCCHHHHHHTTSSS-CCEEEECTTCCST--HHHHHHHHHHHHHHHTTCCEEEECTTTTCCC---SS
T ss_pred CeeeecCcccCccccCCHHHhhhhccCC-CeEEEeccccccc--cHHHHHHHHHHHHHhcCCEEEEecccccccc---cc
Confidence 3444555443 35677777777665 8899999998762 2456788888999999999888776543321 15
Q ss_pred CCCCEEEeecCCchhhhcCCCccEEEecCChhhHHHHHHcCCCeEeccccch----HHHHHHHHHHcCceeEecCCCCCH
Q psy16939 84 LPDNVFIQKWYPQTDILAHPNLRLFITHGGISSLMEASSLGVPVLGVPFFGD----QYRNMVLLRHRGYALIEPIQTLTK 159 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~~l~~~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~d----Q~~na~~l~~~G~g~~l~~~~~~~ 159 (174)
.++|+.+.+|+|+.++| +.+|+||||||+||++||+++|+|+|++|..+| |+.||+++++.|+|+.++..+++.
T Consensus 268 ~~~~v~i~~~~p~~~ll--~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~ 345 (391)
T d1pn3a_ 268 DGADCFVVGEVNLQELF--GRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTI 345 (391)
T ss_dssp CCTTCCEESSCCHHHHH--TTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCH
T ss_pred CCCCEEEecccCHHHHH--hhccEEEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCH
Confidence 68999999999999999 669999999999999999999999999998876 999999999999999999889999
Q ss_pred HHHHHHHHHhhcC
Q psy16939 160 QSFLKNAQTMLND 172 (174)
Q Consensus 160 ~~l~~al~~ll~~ 172 (174)
++|.++|+++|++
T Consensus 346 ~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 346 DSLSAALDTALAP 358 (391)
T ss_dssp HHHHHHHHHHTST
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999965
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=1.1e-18 Score=134.14 Aligned_cols=131 Identities=18% Similarity=0.152 Sum_probs=97.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEecC-CCCcc---ccccCCCCCEEEeecCCchh-hhcCCCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKIDI-TNDPV---LNAKTLPDNVFIQKWYPQTD-ILAHPNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~~~-~~~~~---~~~~~~~~nv~~~~~~p~~~-~l~~~~~ 105 (174)
+..+++.+||.+ .....+.+.+.+..... ...+.... ..... ........++.+.+|.++.. +| +.|
T Consensus 177 ~~~i~~~~gs~g-----~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm--~~a 249 (351)
T d1f0ka_ 177 PVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWA 249 (351)
T ss_dssp SEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHC
T ss_pred Ccccccccccch-----hhhhHHHHHHhhhhhcccceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHH--HhC
Confidence 566777777764 34445555555555443 23333333 22110 11114567889999987665 55 789
Q ss_pred cEEEecCChhhHHHHHHcCCCeEecccc---chHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHh
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGVPFF---GDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTM 169 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~vP~~---~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~l 169 (174)
|++|||||++|++|+++.|+|+|++|+. +||..||.++++.|+|+.++.++++.+.+.++|.++
T Consensus 250 dl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l 316 (351)
T d1f0ka_ 250 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW 316 (351)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred chhhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh
Confidence 9999999999999999999999999975 589999999999999999988889999999998765
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=98.30 E-value=5.1e-06 Score=61.96 Aligned_cols=131 Identities=12% Similarity=0.171 Sum_probs=86.4
Q ss_pred CCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-----cEEEEecCCCCccc----cccCCCCCEEEeecCCch-hhh
Q psy16939 31 KGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-----PIFWKIDITNDPVL----NAKTLPDNVFIQKWYPQT-DIL 100 (174)
Q Consensus 31 ~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-----~~i~~~~~~~~~~~----~~~~~~~nv~~~~~~p~~-~~l 100 (174)
+++.+++..|.... ..-...++++++.+.. .+++..++.....+ .+....+++.+.++..+. .++
T Consensus 193 ~~~~~i~~~gr~~~-----~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 267 (370)
T d2iw1a1 193 EQQNLLLQVGSDFG-----RKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM 267 (370)
T ss_dssp TTCEEEEEECSCTT-----TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred ccceEEEEEecccc-----ccchhhhcccccccccccccceeeecccccccccccccccccccccccccccccccccccc
Confidence 35778888888854 3336677777766542 33444444332211 111345688888876544 455
Q ss_pred cCCCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 101 AHPNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 101 ~~~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
..+|++|.- |-..++.||+++|+|+|+-+..+ ....+.+-+.|..+.. ..+.+++.+++.++++|+
T Consensus 268 --~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~i~~~~~G~l~~~-~~d~~~la~~i~~ll~d~ 337 (370)
T d2iw1a1 268 --AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQS 337 (370)
T ss_dssp --HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCH
T ss_pred --ccccccccccccccccceeeecccCCeeEEEeCCCC----hHHHhcCCCceEEEcC-CCCHHHHHHHHHHHHcCH
Confidence 679999964 44578999999999999875433 2345666678876532 237899999999999875
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.02 E-value=2.2e-05 Score=53.09 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=83.9
Q ss_pred eEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEecCCCCcc---cc---ccCCCCCEEEeecCCchhhhcC-CCc
Q psy16939 34 FVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKIDITNDPV---LN---AKTLPDNVFIQKWYPQTDILAH-PNL 105 (174)
Q Consensus 34 ~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~~~~~~~~---~~---~~~~~~nv~~~~~~p~~~~l~~-~~~ 105 (174)
..++..|... +..-.+.++++++..+. ++++.......+. +. .....+|+.+.+++|..++... ..|
T Consensus 13 ~~~l~iGrl~-----~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 87 (166)
T d2f9fa1 13 DFWLSVNRIY-----PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 87 (166)
T ss_dssp SCEEEECCSS-----GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CEEEEEecCc-----cccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeecccccccccccccc
Confidence 3356778774 34446777777777764 5555433222111 10 1124679999999987654321 678
Q ss_pred cEEEecC----ChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHG----GISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hg----G~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
|++|+.. ...++.||+++|+|+|+-+..+ ....+.....|...+. +.+++.+++.++++++
T Consensus 88 d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~~~~g~~~~~---d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 88 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVINEKTGYLVNA---DVNEIIDAMKKVSKNP 152 (166)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCBTTTEEEECS---CHHHHHHHHHHHHHCT
T ss_pred cccccccccccccccccccccccccceeecCCc----ceeeecCCcccccCCC---CHHHHHHHHHHHHhCH
Confidence 8888764 3458999999999999986533 2333455567776542 6899999999999875
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.43 E-value=0.00052 Score=52.21 Aligned_cols=133 Identities=11% Similarity=0.037 Sum_probs=76.7
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhC----CCcEEEEecCCCC-c---cccccCCCCCEEEeecCCchhhhcC-
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQL----KLPIFWKIDITND-P---VLNAKTLPDNVFIQKWYPQTDILAH- 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~-~---~~~~~~~~~nv~~~~~~p~~~~l~~- 102 (174)
.+.+++..|+.....+ ....+.+.+..+... +.++++...+... . +......+.+..+.++.+..++...
T Consensus 248 ~~~~i~~~G~~~~~~K-g~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (437)
T d2bisa1 248 EGVTFMFIGRFDRGQK-GVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELY 326 (437)
T ss_dssp SCEEEEEESCBCSSSS-CHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHH
T ss_pred CCceEEEeecccccch-hHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHH
Confidence 4567777887654211 333333333333222 2355554333211 1 0011134566677777776432221
Q ss_pred CCccEEEec----CChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITH----GGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~h----gG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..+|+++.. +...++.||+++|+|+|.-...+ ....+. .+.|..++.. +.+++.+++.+++.+
T Consensus 327 ~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~----~~e~i~-~~~G~~~~~~--d~~~la~~i~~ll~~ 393 (437)
T d2bisa1 327 GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG----LRDIIT-NETGILVKAG--DPGELANAILKALEL 393 (437)
T ss_dssp TTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTT----HHHHCC-TTTCEEECTT--CHHHHHHHHHHHHTT
T ss_pred hhhccccccccccccchHHHHHHHCCCCEEEeCCCC----cHHhEE-CCcEEEECCC--CHHHHHHHHHHHHhC
Confidence 779999866 44569999999999999865432 222233 3678887643 689999999998863
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=96.97 E-value=0.0015 Score=44.79 Aligned_cols=79 Identities=9% Similarity=0.000 Sum_probs=55.2
Q ss_pred CCCCEEEeecCCchh---hhcCCCccEEEe----cCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCC
Q psy16939 84 LPDNVFIQKWYPQTD---ILAHPNLRLFIT----HGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQT 156 (174)
Q Consensus 84 ~~~nv~~~~~~p~~~---~l~~~~~~~~I~----hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~ 156 (174)
......+..+++..+ ++ ..+|++|. .|-.+++.||+++|+|+|.--.. .....+ ..+.|..++..
T Consensus 90 ~~~~~~~~~~~~~~~l~~~~--~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~----~~~e~i-~~~~g~~~~~~- 161 (196)
T d2bfwa1 90 HGNVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG- 161 (196)
T ss_dssp CTTEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CTTTCEEECTT-
T ss_pred cceeEEeeeccccccchhcc--ccccccccccccccccccchhhhhcCceeeecCCC----ccceee-cCCceeeECCC-
Confidence 445556666777554 34 78999994 55578999999999999986321 122222 33678777643
Q ss_pred CCHHHHHHHHHHhhc
Q psy16939 157 LTKQSFLKNAQTMLN 171 (174)
Q Consensus 157 ~~~~~l~~al~~ll~ 171 (174)
+.+++.++|.++++
T Consensus 162 -~~~~l~~~i~~~l~ 175 (196)
T d2bfwa1 162 -DPGELANAILKALE 175 (196)
T ss_dssp -CHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHh
Confidence 68899999988775
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.84 E-value=0.002 Score=50.08 Aligned_cols=136 Identities=10% Similarity=-0.046 Sum_probs=82.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc--c--cccCCCCCEEEeecCCchhh-hcCCCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV--L--NAKTLPDNVFIQKWYPQTDI-LAHPNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~--~--~~~~~~~nv~~~~~~p~~~~-l~~~~~~ 106 (174)
+..+++..|..... ...+.+-+.+..+.+.+.++++...++.... + .+...+.++.+..+.+.... +.+..||
T Consensus 290 ~~~~i~~vgrl~~~--KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (477)
T d1rzua_ 290 GSPLFCVISRLTWQ--KGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCD 367 (477)
T ss_dssp SSCEEEEESCBSTT--TTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CccEEEEEeeeeec--CCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCc
Confidence 45677788887652 2334443334444445667777655432110 0 11145788888887765432 1126799
Q ss_pred EEEecCC----hhhHHHHHHcCCCeEeccccc--hH---HHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhc
Q psy16939 107 LFITHGG----ISSLMEASSLGVPVLGVPFFG--DQ---YRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLN 171 (174)
Q Consensus 107 ~~I~hgG----~~t~~eal~~g~P~i~vP~~~--dQ---~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~ 171 (174)
++|...= ..+++||+++|+|+|+--..+ |. ..+.......+.|..++.. +.++|.++|+++++
T Consensus 368 ~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~--d~~~la~ai~~~l~ 439 (477)
T d1rzua_ 368 AIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRRTVR 439 (477)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHHHHH
T ss_pred cccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCC--CHHHHHHHHHHHHh
Confidence 9998762 247889999999999854321 11 1223333445678887654 68899999887764
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=95.83 E-value=0.026 Score=42.52 Aligned_cols=132 Identities=13% Similarity=0.105 Sum_probs=81.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC--cEEEEecCCCCcc---ccccCCCCCEEEeecCCchhhhcC-CCc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL--PIFWKIDITNDPV---LNAKTLPDNVFIQKWYPQTDILAH-PNL 105 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~--~~i~~~~~~~~~~---~~~~~~~~nv~~~~~~p~~~~l~~-~~~ 105 (174)
++.+++++-..... ...+...+++..+..... .+++-........ ........|+.+.+.+++.+.+.. ..|
T Consensus 195 ~~~~lvt~hr~~n~--~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s 272 (373)
T d1v4va_ 195 GPYVTVTMHRRENW--PLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRAS 272 (373)
T ss_dssp SCEEEECCCCGGGG--GGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTE
T ss_pred ccceeEEecccccc--chHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhc
Confidence 57888888765431 123334444554444432 4554433321110 001134578999998887765321 679
Q ss_pred cEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 106 RLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 106 ~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+++|+.+|. ...||.+.|+|+|.+....+.+.- .+.|.-+.+. .+.+++..+++.++.++
T Consensus 273 ~~vignSss-gi~Ea~~lg~P~Inir~~~eRqeg----~~~g~nvlv~---~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 273 LLLVTDSGG-LQEEGAALGVPVVVLRNVTERPEG----LKAGILKLAG---TDPEGVYRVVKGLLENP 332 (373)
T ss_dssp EEEEESCHH-HHHHHHHTTCCEEECSSSCSCHHH----HHHTSEEECC---SCHHHHHHHHHHHHTCH
T ss_pred eeEecccch-hhhcchhhcCcEEEeCCCccCHHH----HhcCeeEEcC---CCHHHHHHHHHHHHcCH
Confidence 999999986 577999999999999654433332 1356665543 36889999998887653
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=95.65 E-value=0.026 Score=42.62 Aligned_cols=133 Identities=14% Similarity=0.126 Sum_probs=73.1
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC-cEEEEecCCCC-cc--ccccCCCCCEEEeecCCchhhhcC-CCcc
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL-PIFWKIDITND-PV--LNAKTLPDNVFIQKWYPQTDILAH-PNLR 106 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~-~~i~~~~~~~~-~~--~~~~~~~~nv~~~~~~p~~~~l~~-~~~~ 106 (174)
++.+++++--...........+..+...+..... .+++....... .. .......+|+.+.+.+++.+.+.. ..|+
T Consensus 198 ~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~ 277 (377)
T d1o6ca_ 198 DKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSH 277 (377)
T ss_dssp SEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCS
T ss_pred CceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhh
Confidence 4677777754433111123455566666666544 34443322111 00 001134679999999887764321 6699
Q ss_pred EEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 107 LFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 107 ~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
++|+.+|.+ ..||...|+|+|.+-...|++.- .+.|.-+.+. .+.+++.+++++++++
T Consensus 278 ~vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~----~~~g~nilv~---~~~~~I~~~i~~~l~~ 335 (377)
T d1o6ca_ 278 FILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG----VEAGTLKLAG---TDEENIYQLAKQLLTD 335 (377)
T ss_dssp EEEEC--CH-HHHGGGGTCCEEEECSCCC---C----TTTTSSEEEC---SCHHHHHHHHHHHHHC
T ss_pred eeecccchh-HHhhhhhhceEEEeCCCCcCcch----hhcCeeEECC---CCHHHHHHHHHHHHhC
Confidence 999999986 77999999999999543333321 2356555553 3678888888887764
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=93.71 E-value=0.54 Score=30.99 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=55.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEe-ecCCchhh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQ-KWYPQTDI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~~~ 99 (174)
.++-+++.+.. ..+++.|..+ .+.++.++....+-+++=......... . .....+... ++.....+
T Consensus 26 ~~lG~~la~~g--~~V~~GG~~G--------lM~ava~ga~~~gg~viGilP~~~~~n--~-~~~~~i~~~~~~~~Rk~~ 92 (170)
T d1rcua_ 26 LELGRTLAKKG--YLVFNGGRDG--------VMELVSQGVREAGGTVVGILPDEEAGN--P-YLSVAVKTGLDFQMRSFV 92 (170)
T ss_dssp HHHHHHHHHTT--CEEEECCSSH--------HHHHHHHHHHHTTCCEEEEESTTCCCC--T-TCSEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHCC--CEEECCCccC--------HHHHHHHHHHhcCCccccccchhhccC--c-ccceeEEeccchhhhHHH
Confidence 35566666654 4667766654 478888888888777665554322210 0 111122222 22222233
Q ss_pred hcCCCccEEEe-cCChhhHHH---HHHcCCCeEecc
Q psy16939 100 LAHPNLRLFIT-HGGISSLME---ASSLGVPVLGVP 131 (174)
Q Consensus 100 l~~~~~~~~I~-hgG~~t~~e---al~~g~P~i~vP 131 (174)
+. ..+|++|. -||.||+.| ++..++|++++.
T Consensus 93 m~-~~sda~I~lPGG~GTl~El~~a~~l~KPiilln 127 (170)
T d1rcua_ 93 LL-RNADVVVSIGGEIGTAIEILGAYALGKPVILLR 127 (170)
T ss_dssp HH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred Hh-hcccceeeeccccchHHHHHHHHHhCCceEEec
Confidence 32 55676654 566899876 578899999884
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=92.57 E-value=0.13 Score=37.38 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=80.3
Q ss_pred CCeEEEEcCCCcCC-CCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc---ccccCC----CCCEEE-eecCC---chhh
Q psy16939 32 GGFVYMSFGSVVDP-TKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV---LNAKTL----PDNVFI-QKWYP---QTDI 99 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~-~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~---~~~~~~----~~nv~~-~~~~p---~~~~ 99 (174)
++.|++..|+.... ..++.+.+.++++.+.+.+.++++..++.+.+. +.+ .. ..++.- .+-.+ ...+
T Consensus 180 ~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~-~~~~~~~~~~~~l~g~~sl~el~~l 258 (348)
T d1pswa_ 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILA-ALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHT-TSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccchHHHHHHHHH-hhhcccccccccccCCccHHHHHHH
Confidence 67888888865432 358889999999999888777777655433211 100 11 112221 11122 3345
Q ss_pred hcCCCccEEEecCChhhHHHHHHcCCCeEec--cccchHH-------------HHHHHHHH----cCceeEecCCCCCHH
Q psy16939 100 LAHPNLRLFITHGGISSLMEASSLGVPVLGV--PFFGDQY-------------RNMVLLRH----RGYALIEPIQTLTKQ 160 (174)
Q Consensus 100 l~~~~~~~~I~hgG~~t~~eal~~g~P~i~v--P~~~dQ~-------------~na~~l~~----~G~g~~l~~~~~~~~ 160 (174)
+ ..||++|+.-+ |.++=|.+.|+|.+.+ |...+.+ ..+.-+.+ .+-... -++.+++
T Consensus 259 i--~~a~l~I~~Dt-g~~HlAaa~g~p~i~lfg~~~~~~~~P~~~~~~~l~~~~~c~~c~~~~~~~~~~~c--~~~I~~~ 333 (348)
T d1pswa_ 259 I--AACKAIVTNDS-GLMHVAAALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQS--LIDITPQ 333 (348)
T ss_dssp H--HTSSEEEEESS-HHHHHHHHTTCCEEEEESSSCTTSSCCCCTTEEEEESSCC----------CCCCHH--HHTSCHH
T ss_pred H--hcceeEeecCc-cHHHHHHHcCCCEEEEECCCCHhhhCCCCCCeEEEecCCCCCcccCCCCCCCchhh--HhCCCHH
Confidence 5 67999999987 5789999999999999 5321110 00000000 000000 1357999
Q ss_pred HHHHHHHHhhcCC
Q psy16939 161 SFLKNAQTMLNDP 173 (174)
Q Consensus 161 ~l~~al~~ll~~~ 173 (174)
++.++++++|.++
T Consensus 334 ~V~~~~~~lL~~~ 346 (348)
T d1pswa_ 334 RVLEELNALLLQE 346 (348)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC
Confidence 9999999998753
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=90.64 E-value=0.17 Score=37.95 Aligned_cols=129 Identities=15% Similarity=0.119 Sum_probs=76.6
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHh---hCCC--cEEEEecCCCC-c-cc-cccCCCCCEEEeecCCchhhhcC-
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFK---QLKL--PIFWKIDITND-P-VL-NAKTLPDNVFIQKWYPQTDILAH- 102 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~---~~~~--~~i~~~~~~~~-~-~~-~~~~~~~nv~~~~~~p~~~~l~~- 102 (174)
++.++|++=.... .. +.++.+..++. .... .+++-...... . .. .......|+.+.+.+++.+.+..
T Consensus 205 ~~~ilvt~H~~~~---~~-~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll 280 (376)
T d1f6da_ 205 KKMILVTGHRRES---FG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (376)
T ss_dssp SEEEEECCCCBSS---CC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CceEEEecccchh---hh-hhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHH
Confidence 5778888764433 22 23344444443 3333 34443322110 0 00 00134578999988877663211
Q ss_pred CCccEEEecCChhhHHHHHHcCCCeEeccccchHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHhhcC
Q psy16939 103 PNLRLFITHGGISSLMEASSLGVPVLGVPFFGDQYRNMVLLRHRGYALIEPIQTLTKQSFLKNAQTMLND 172 (174)
Q Consensus 103 ~~~~~~I~hgG~~t~~eal~~g~P~i~vP~~~dQ~~na~~l~~~G~g~~l~~~~~~~~~l~~al~~ll~~ 172 (174)
..|+++|+..|. ..-||...|+|+|.+-...+|+. ++ +.|.-+.+. .+.+++.+++.+++.+
T Consensus 281 ~~a~~vignSss-gi~Ea~~lg~P~Inir~~ter~~---~~-~~g~~i~v~---~~~~~I~~ai~~~l~~ 342 (376)
T d1f6da_ 281 NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERPE---AV-TAGTVRLVG---TDKQRIVEEVTRLLKD 342 (376)
T ss_dssp HHCSEEEESSSG-GGGTGGGGTCCEEECSSCCSCHH---HH-HHTSEEECC---SSHHHHHHHHHHHHHC
T ss_pred hhceEEEecCcc-hHhhHHHhCCCEEEcCCCccCcc---ce-ecCeeEECC---CCHHHHHHHHHHHHhC
Confidence 569999999986 47799999999998844445553 22 345555443 3678888888887754
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=90.53 E-value=1.5 Score=28.94 Aligned_cols=118 Identities=9% Similarity=-0.032 Sum_probs=63.8
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCEEEeecCCch-hh
Q psy16939 21 SDLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNVFIQKWYPQT-DI 99 (174)
Q Consensus 21 ~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~~ 99 (174)
.++-+++.+. +.-+|+.|+.. .++.++.++....+-+++-.........-.......+....+.+..+ ..
T Consensus 23 ~~lg~~la~~--g~~lv~GGG~~-------GlMga~a~ga~~~gg~v~gv~~~~l~~~~~~~~~~~~~~~~~~~~~Rk~~ 93 (179)
T d1t35a_ 23 AELGVYMAEQ--GIGLVYGGSRV-------GLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAK 93 (179)
T ss_dssp HHHHHHHHHT--TCEEEECCCCS-------HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHH
T ss_pred HHHHHHHHHC--CCeEEECCCch-------HHHHHHhcchhhcCCceeccccchhhccccccccceeeeeeccHHHHHHH
Confidence 3455556554 46666776653 25788888888877776655544322210000122344555544322 23
Q ss_pred hcCCCccEE-EecCChhhHHHHHHc---------CCCeEeccc--cchH-HHHHHHHHHcCc
Q psy16939 100 LAHPNLRLF-ITHGGISSLMEASSL---------GVPVLGVPF--FGDQ-YRNMVLLRHRGY 148 (174)
Q Consensus 100 l~~~~~~~~-I~hgG~~t~~eal~~---------g~P~i~vP~--~~dQ-~~na~~l~~~G~ 148 (174)
+. ..+|+| +--||.||+-|.... .+|++++=. ++|. ...-+.+.+.|.
T Consensus 94 m~-~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw~~l~~~l~~~~~~gf 154 (179)
T d1t35a_ 94 MS-ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGF 154 (179)
T ss_dssp HH-HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTS
T ss_pred HH-HhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCCccHHHHHHHHHHHHHcCC
Confidence 32 345555 567889999887544 489998742 2332 222345555564
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=88.61 E-value=3.8 Score=30.91 Aligned_cols=139 Identities=12% Similarity=0.050 Sum_probs=80.0
Q ss_pred HHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCC---c-EEEEecCCCCcc--------------------
Q psy16939 23 LQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKL---P-IFWKIDITNDPV-------------------- 78 (174)
Q Consensus 23 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~---~-~i~~~~~~~~~~-------------------- 78 (174)
..+.....+.+.++++.|...... .-...++++...+++.+. . +++..+......
T Consensus 244 ~~~l~~~~~~~~~il~V~Rld~~K-Gi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~ 322 (456)
T d1uqta_ 244 LAQLKAELKNVQNIFSVERLDYSK-GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRING 322 (456)
T ss_dssp HHHHHHHTTTCEEEEEECCBCGGG-CHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEeCCCchhh-chHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 333333344567889999886532 224445555555665553 2 333333211100
Q ss_pred -ccccCCCCCEEEeecCCchhhhcC-CCccEEEec---CC-hhhHHHHHHcCCCe----Eeccccc---hHHHHHHHHHH
Q psy16939 79 -LNAKTLPDNVFIQKWYPQTDILAH-PNLRLFITH---GG-ISSLMEASSLGVPV----LGVPFFG---DQYRNMVLLRH 145 (174)
Q Consensus 79 -~~~~~~~~nv~~~~~~p~~~~l~~-~~~~~~I~h---gG-~~t~~eal~~g~P~----i~vP~~~---dQ~~na~~l~~ 145 (174)
+......+.+.+...+++.++.++ ..||+++.- -| ..+..|++++|+|. +++..++ ++.
T Consensus 323 ~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l-------- 394 (456)
T d1uqta_ 323 KYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-------- 394 (456)
T ss_dssp HHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC--------
T ss_pred hhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHh--------
Confidence 000012345666667776665433 678988863 33 45789999999993 4444322 332
Q ss_pred cCceeEecCCCCCHHHHHHHHHHhhcCC
Q psy16939 146 RGYALIEPIQTLTKQSFLKNAQTMLNDP 173 (174)
Q Consensus 146 ~G~g~~l~~~~~~~~~l~~al~~ll~~~ 173 (174)
+-|+.+++ .+.+++.++|.++|+++
T Consensus 395 -~~g~lVnP--~d~~~~A~ai~~aL~~~ 419 (456)
T d1uqta_ 395 -TSALIVNP--YDRDEVAAALDRALTMS 419 (456)
T ss_dssp -TTSEEECT--TCHHHHHHHHHHHHTCC
T ss_pred -CCeEEECc--CCHHHHHHHHHHHHcCC
Confidence 33777765 47899999999998764
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=83.45 E-value=2.7 Score=24.18 Aligned_cols=82 Identities=20% Similarity=0.215 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCccccccCCCCCE-EEeecCCchhhhcCCCccEEEe
Q psy16939 32 GGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPVLNAKTLPDNV-FIQKWYPQTDILAHPNLRLFIT 110 (174)
Q Consensus 32 ~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~~l~~~~~~~~I~ 110 (174)
++++++.+|-++. .+++.|.+.+.+|.+.-.....+... ....+. ..... .....+ ..+|.+|.
T Consensus 6 K~v~ViGlG~sG~----------s~a~~L~~~g~~v~~~D~~~~~~~~~--~~~~~~~~~~~~-~~~~~~--~~~d~vi~ 70 (93)
T d2jfga1 6 KNVVIIGLGLTGL----------SCVDFFLARGVTPRVMDTRMTPPGLD--KLPEAVERHTGS-LNDEWL--MAADLIVA 70 (93)
T ss_dssp CCEEEECCSHHHH----------HHHHHHHHTTCCCEEEESSSSCTTGG--GSCTTSCEEESB-CCHHHH--HHCSEEEE
T ss_pred CEEEEEeECHHHH----------HHHHHHHHCCCEEEEeeCCcCchhHH--HHhhccceeecc-cchhhh--ccCCEEEE
Confidence 5677888877642 35778888899887765433222111 122222 22222 234455 56899999
Q ss_pred cCChh----hHHHHHHcCCCeE
Q psy16939 111 HGGIS----SLMEASSLGVPVL 128 (174)
Q Consensus 111 hgG~~----t~~eal~~g~P~i 128 (174)
..|.. .+.+|...|+|+|
T Consensus 71 SPGi~~~~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 71 SPGIALAHPSLSAAADAGIEIV 92 (93)
T ss_dssp CTTSCTTSHHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHcCCCeE
Confidence 88853 4566777788776
|
| >d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TT1465 (TTHA1644) species: Thermus thermophilus [TaxId: 274]
Probab=82.84 E-value=2.6 Score=28.51 Aligned_cols=46 Identities=22% Similarity=0.269 Sum_probs=27.2
Q ss_pred CCcc-EEEecCChhhHHHHHH----------cCCCeEeccc-cchHH-HHHHHHHHcCc
Q psy16939 103 PNLR-LFITHGGISSLMEASS----------LGVPVLGVPF-FGDQY-RNMVLLRHRGY 148 (174)
Q Consensus 103 ~~~~-~~I~hgG~~t~~eal~----------~g~P~i~vP~-~~dQ~-~na~~l~~~G~ 148 (174)
..+| +++-.||.||+-|... +.+|++++-. ++|.. .....+.+.|.
T Consensus 126 ~~sDafI~lPGG~GTLdEl~e~lt~~ql~~~~~kPIil~~~gfw~~l~~~l~~~~~~gf 184 (208)
T d1weka_ 126 RYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYWEGLVRWLAFLRDQKA 184 (208)
T ss_dssp HTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHHHHHHHHHHHHHHTTS
T ss_pred hCCCceEEecCcchhHHHHHHHHHHHhccccCcCcccccCCcHHHHHHHHHHHHHHCCC
Confidence 5576 5566889999988632 3678888731 22222 22345555554
|
| >d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TT1887 (TTHA0294) species: Thermus thermophilus [TaxId: 274]
Probab=81.29 E-value=1.4 Score=29.03 Aligned_cols=91 Identities=13% Similarity=-0.005 Sum_probs=47.5
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcCCCCCCHHHHHHHHHHHhhCCCcEEEEecCCCCcc-ccccCCCCCEEEeecCC-chhh
Q psy16939 22 DLQQRADAAKGGFVYMSFGSVVDPTKLSEETKLGFLEVFKQLKLPIFWKIDITNDPV-LNAKTLPDNVFIQKWYP-QTDI 99 (174)
Q Consensus 22 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~nv~~~~~~p-~~~~ 99 (174)
++-+++.+. +..+|+.|+.+ .+..+.++..+.+-+++=...+..++. ......-+.....+.+. ....
T Consensus 24 ~lG~~la~~--g~~lv~GGg~G--------~M~a~a~ga~~~gG~~iGv~~~~~l~~~~~~n~~~~~~i~~~~~~~Rk~~ 93 (171)
T d1weha_ 24 RYGEVLAEE--GFGLACGGYQG--------GMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVDLELPAATLPQRIGR 93 (171)
T ss_dssp HHHHHHHHT--TEEEEECCSST--------HHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCSEECCCSSHHHHHHH
T ss_pred HHHHHHHHC--CCceeeCcchH--------HHHHHHHHHHhccCceeeeeeccccchhhccCcccccccccchHHHHHHH
Confidence 444555554 57777776543 377788887777766654432221111 00001112222233322 2223
Q ss_pred hcCCCccEEEe-cCChhhHHHHHHc
Q psy16939 100 LAHPNLRLFIT-HGGISSLMEASSL 123 (174)
Q Consensus 100 l~~~~~~~~I~-hgG~~t~~eal~~ 123 (174)
+. ..+|+||. -||.||+-|....
T Consensus 94 m~-~~sda~I~lPGG~GTLdEl~e~ 117 (171)
T d1weha_ 94 LL-DLGAGYLALPGGVGTLAELVLA 117 (171)
T ss_dssp HH-HHEEEEEECSCCHHHHHHHHHH
T ss_pred HH-HcccceeecCCccchHHHHHHH
Confidence 32 55776665 7899999998654
|