Psyllid ID: psy16953
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 806 | 2.2.26 [Sep-21-2011] | |||||||
| Q91V92 | 1091 | ATP-citrate synthase OS=M | yes | N/A | 0.882 | 0.651 | 0.732 | 0.0 | |
| Q32PF2 | 1091 | ATP-citrate synthase OS=B | yes | N/A | 0.897 | 0.662 | 0.718 | 0.0 | |
| Q2TCH3 | 1101 | ATP-citrate synthase OS=O | N/A | N/A | 0.897 | 0.656 | 0.710 | 0.0 | |
| P53396 | 1101 | ATP-citrate synthase OS=H | yes | N/A | 0.897 | 0.656 | 0.708 | 0.0 | |
| P16638 | 1100 | ATP-citrate synthase OS=R | yes | N/A | 0.895 | 0.656 | 0.709 | 0.0 | |
| P53585 | 1106 | Probable ATP-citrate synt | yes | N/A | 0.884 | 0.644 | 0.667 | 0.0 | |
| Q8X097 | 670 | Probable ATP-citrate synt | N/A | N/A | 0.748 | 0.9 | 0.673 | 0.0 | |
| O93988 | 674 | ATP-citrate synthase subu | N/A | N/A | 0.748 | 0.894 | 0.671 | 0.0 | |
| Q9P7W3 | 615 | Probable ATP-citrate synt | yes | N/A | 0.745 | 0.977 | 0.652 | 0.0 | |
| Q54YA0 | 622 | Probable ATP-citrate synt | yes | N/A | 0.745 | 0.966 | 0.534 | 0.0 |
| >sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1 | Back alignment and function desciption |
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Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/752 (73%), Positives = 632/752 (84%), Gaps = 41/752 (5%)
Query: 94 VLITGGGIANFTNVAATFKGIVTALTEFQSKLIEHKISIFVRRAGPNYQEGLRIIREVGK 153
+LI GG IANFTNVAATFKGIV A+ ++Q L EH+++IFVRR GPNYQEGLR++ EVGK
Sbjct: 337 ILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGK 396
Query: 154 TLGIPLFVFGPETHMTAIVGMALGKKEIPSETSADGATANFLL----------------- 196
T GIP+ VFG ETHMTAIVGMALG + IP++ TANFLL
Sbjct: 397 TTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASF 456
Query: 197 ------------------PGGQ------EQTKAIVWGMQTRAVQSMLDFDFVCRRSEPSV 232
P G+ TKAIVWGMQTRAVQ MLDFD+VC R EPSV
Sbjct: 457 SESRADEVAPAKKAKPAMPQGKSATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSV 516
Query: 233 AAMVYPFTGDHKLKFYWGHKEVLIPVYKKMEDAMSKNKDADVLVNFASLRSAYDSTIETL 292
AAMVYPFTGDHK KFYWGHKE+LIPV+K M DAM K+ + DVL+NFASLRSAYDST+ET+
Sbjct: 517 AAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETM 576
Query: 293 GFPQIRSIAIIAEGIPENMTRKLNLLAKEKGVSIIGPATVGGLKPGCFKIGNTGGMMDNI 352
+ QIR+IAIIAEGIPE +TRKL A +KGV+IIGPATVGG+KPGCFKIGNTGGM+DNI
Sbjct: 577 NYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNI 636
Query: 353 LHSKLYRPGSVAYVSRSGGMSNELNNIISKATNGVYEGVAIGGDRYPGTTFMDHILRYQA 412
L SKLYRPGSVAYVSRSGGMSNELNNIIS+ T+GVYEGVAIGGDRYPG+TFMDH+LRYQ
Sbjct: 637 LASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQD 696
Query: 413 DPEVKMIVLLGEVGGVEEYEVCAALKDKRITKPLVAWCIGTCASMFTSEVQFGHAGSCAN 472
P VKMIV+LGE+GG EEY++C +K+ R+TKP+V WCIGTCA+MF+SEVQFGHAG+CAN
Sbjct: 697 TPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACAN 756
Query: 473 SDAETAVVKNKSLAQAGAHVPSSFDTLGDIIGSVYKDLVSRGDIVPQPELPPPTVPMDYS 532
+ETAV KN++L +AG VP SFD LG+II SVY+DLV++G IVP E+PPPTVPMDYS
Sbjct: 757 QASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVAKGAIVPAQEVPPPTVPMDYS 816
Query: 533 WARELGLIRKPASFMTSICDERGQELLYAGMPISDVLKQNMGIGGVLSLLWFQRQLPPYV 592
WARELGLIRKPASFMTSICDERGQEL+YAGMPI++V K+ MGIGGVL LLWFQR+LP Y
Sbjct: 817 WARELGLIRKPASFMTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQRRLPKYS 876
Query: 593 CKFLEMSLMVTADHGPAVSGAHNTIVCARAGKDLVSSLVSGLLTIGDRFGGALNDAAIQF 652
C+F+EM LMVTADHGPAVSGAHNTI+CARAGKDLVSSL SGLLTIGDRFGGAL+ AA F
Sbjct: 877 CQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMF 936
Query: 653 SAAYDAGLIPMEFVNEMRKKGKLIMGIGHRVKSINNPDMRVKIIKEFVLQNFPTTPLLNY 712
S A+D+G+IPMEFVN+M+K+GKLIMGIGHRVKSINNPDMRV+I+K+FV Q+FP TPLL+Y
Sbjct: 937 SKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDY 996
Query: 713 ALEVEKITTSKKPNLILNVDGVIAVAFVDLLRHSGSFTREEAQEYVEMGAINGLFVLGRS 772
ALEVEKITTSKKPNLILNVDG I VAFVD+LR+ GSFTREEA EYV++GA+NG+FVLGRS
Sbjct: 997 ALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGIFVLGRS 1056
Query: 773 IGFIGHYMDQKRLKQGLYRHPWDDISYVLPEQ 804
+GFIGHY+DQKRLKQGLYRHPWDDISYVLPE
Sbjct: 1057 MGFIGHYLDQKRLKQGLYRHPWDDISYVLPEH 1088
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ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues. Has a central role in de novo lipid synthesis. In nervous tissue it may be involved in the biosynthesis of acetylcholine. Mus musculus (taxid: 10090) EC: 2EC: .EC: 3EC: .EC: 3EC: .EC: 8 |
| >sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1 | Back alignment and function description |
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| >sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1 | Back alignment and function description |
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| >sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3 | Back alignment and function description |
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| >sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1 | Back alignment and function description |
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| >sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8X097|ACL1_NEUCR Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B14D6.310 PE=3 SV=1 | Back alignment and function description |
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| >sp|O93988|ACL1_SORMK ATP-citrate synthase subunit 1 OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=ACL1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9P7W3|ACL1_SCHPO Probable ATP-citrate synthase subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1703.07 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54YA0|ACLY_DICDI Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 806 | ||||||
| 237874159 | 1092 | ATP citrate lyase [Acyrthosiphon pisum] | 0.899 | 0.663 | 0.810 | 0.0 | |
| 170029202 | 1096 | ATP-citrate synthase [Culex quinquefasci | 0.889 | 0.654 | 0.795 | 0.0 | |
| 156547848 | 1087 | PREDICTED: ATP-citrate synthase-like iso | 0.888 | 0.658 | 0.791 | 0.0 | |
| 195029649 | 1100 | GH19829 [Drosophila grimshawi] gi|193903 | 0.888 | 0.650 | 0.775 | 0.0 | |
| 195121624 | 1097 | GI20417 [Drosophila mojavensis] gi|19391 | 0.888 | 0.652 | 0.778 | 0.0 | |
| 340725045 | 1086 | PREDICTED: ATP-citrate synthase-like [Bo | 0.899 | 0.667 | 0.778 | 0.0 | |
| 350398404 | 1086 | PREDICTED: ATP-citrate synthase-like [Bo | 0.884 | 0.656 | 0.788 | 0.0 | |
| 281363477 | 1095 | ATP citrate lyase, isoform F [Drosophila | 0.888 | 0.653 | 0.778 | 0.0 | |
| 194882681 | 1095 | GG22311 [Drosophila erecta] gi|190658626 | 0.888 | 0.653 | 0.778 | 0.0 | |
| 194756204 | 1097 | GF13329 [Drosophila ananassae] gi|190621 | 0.884 | 0.649 | 0.779 | 0.0 |
| >gi|237874159|ref|NP_001153852.1| ATP citrate lyase [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/769 (81%), Positives = 667/769 (86%), Gaps = 44/769 (5%)
Query: 82 SWISERMGKDQVVLITGGGIANFTNVAATFKGIVTALTEFQSKLIEHKISIFVRRAGPNY 141
S +++ D VLITGGGIANFTNVAATFKGIVTALTE+Q+K+++H I+I+VRRAGPNY
Sbjct: 324 SLMTQEKHPDGKVLITGGGIANFTNVAATFKGIVTALTEYQTKILDHNITIYVRRAGPNY 383
Query: 142 QEGLRIIREVGKTLGIPLFVFGPETHMTAIVGMALGKKEIPSETSADGATANFLLPGGQE 201
QEGLRIIREVGKTL IP++VFGPETHMTAIVG ALGKK IP ET + TANFLLPGGQ+
Sbjct: 384 QEGLRIIREVGKTLRIPIYVFGPETHMTAIVGYALGKKPIPKETEQESVTANFLLPGGQD 443
Query: 202 --------------------------------------------QTKAIVWGMQTRAVQS 217
T+AIVWGMQTRAVQS
Sbjct: 444 SNSVNAQQEVVDGSKSGATSPTVTSTVRPKITSTAPSVKPLFGSNTRAIVWGMQTRAVQS 503
Query: 218 MLDFDFVCRRSEPSVAAMVYPFTGDHKLKFYWGHKEVLIPVYKKMEDAMSKNKDADVLVN 277
MLDFDFVCRR EPSVA +VYPFTGDHKLKFYWGHKEVLIPVYK+MEDAM K+++ADVLVN
Sbjct: 504 MLDFDFVCRRHEPSVACLVYPFTGDHKLKFYWGHKEVLIPVYKRMEDAMLKHQNADVLVN 563
Query: 278 FASLRSAYDSTIETLGFPQIRSIAIIAEGIPENMTRKLNLLAKEKGVSIIGPATVGGLKP 337
FASLRSAYDSTIETL +PQIR+IAIIAEGIPENMTRKL LLA EK V++IGPATVGGLKP
Sbjct: 564 FASLRSAYDSTIETLNYPQIRTIAIIAEGIPENMTRKLILLANEKKVTVIGPATVGGLKP 623
Query: 338 GCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKATNGVYEGVAIGGDR 397
G FKIGNTGGMMDNILHSKLYR GSVAYVSRSGGMSN LNNIIS+ T+GVYEGVAIGGDR
Sbjct: 624 GGFKIGNTGGMMDNILHSKLYRAGSVAYVSRSGGMSNVLNNIISRTTDGVYEGVAIGGDR 683
Query: 398 YPGTTFMDHILRYQADPEVKMIVLLGEVGGVEEYEVCAALKDKRITKPLVAWCIGTCASM 457
YPGTTFMDHI+RYQADPE+KMIVLLGEVGG EEYEVC AL K+ITKPLVAWCIGTCASM
Sbjct: 684 YPGTTFMDHIMRYQADPEIKMIVLLGEVGGTEEYEVCEALTQKKITKPLVAWCIGTCASM 743
Query: 458 FTSEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGDIIGSVYKDLVSRGDIV 517
FTSEVQFGHAGSCANSD ETA KN SL +AGA VP+SFD LGDII VYK LV G I+
Sbjct: 744 FTSEVQFGHAGSCANSDQETATTKNASLREAGAFVPTSFDFLGDIIHDVYKKLVKEGVII 803
Query: 518 PQPELPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELLYAGMPISDVLKQNMGIGG 577
PQ ELPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELLYAGMPISDVLK +MGIGG
Sbjct: 804 PQAELPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELLYAGMPISDVLKADMGIGG 863
Query: 578 VLSLLWFQRQLPPYVCKFLEMSLMVTADHGPAVSGAHNTIVCARAGKDLVSSLVSGLLTI 637
V+SLLWFQR LPPYVCKF EM LMVTADHGPAVSGAHNTIVCARAGKDLVSSLVSGLLTI
Sbjct: 864 VISLLWFQRSLPPYVCKFFEMCLMVTADHGPAVSGAHNTIVCARAGKDLVSSLVSGLLTI 923
Query: 638 GDRFGGALNDAAIQFSAAYDAGLIPMEFVNEMRKKGKLIMGIGHRVKSINNPDMRVKIIK 697
GDRFGGAL+ AA QF+ AYD+GLIPMEFVN+MRKKG LIMGIGHRVKSINNPDMRVKIIK
Sbjct: 924 GDRFGGALDGAAKQFTEAYDSGLIPMEFVNQMRKKGSLIMGIGHRVKSINNPDMRVKIIK 983
Query: 698 EFVLQNFPTTPLLNYALEVEKITTSKKPNLILNVDGVIAVAFVDLLRHSGSFTREEAQEY 757
EFVL+NFP TPLLNYALEVEKITTSKKPNLILNVDG IAV+F DLLRHSGSFTREEAQEY
Sbjct: 984 EFVLENFPATPLLNYALEVEKITTSKKPNLILNVDGCIAVSFCDLLRHSGSFTREEAQEY 1043
Query: 758 VEMGAINGLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISYVLPEQYN 806
++MG+IN LFVLGRSIGFIGH+MDQKRLKQGLYRHPWDDISYVLPEQYN
Sbjct: 1044 IDMGSINSLFVLGRSIGFIGHFMDQKRLKQGLYRHPWDDISYVLPEQYN 1092
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Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170029202|ref|XP_001842482.1| ATP-citrate synthase [Culex quinquefasciatus] gi|167881585|gb|EDS44968.1| ATP-citrate synthase [Culex quinquefasciatus] | Back alignment and taxonomy information |
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| >gi|156547848|ref|XP_001604320.1| PREDICTED: ATP-citrate synthase-like isoform 1 [Nasonia vitripennis] gi|345485396|ref|XP_003425261.1| PREDICTED: ATP-citrate synthase-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|195029649|ref|XP_001987684.1| GH19829 [Drosophila grimshawi] gi|193903684|gb|EDW02551.1| GH19829 [Drosophila grimshawi] | Back alignment and taxonomy information |
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| >gi|195121624|ref|XP_002005320.1| GI20417 [Drosophila mojavensis] gi|193910388|gb|EDW09255.1| GI20417 [Drosophila mojavensis] | Back alignment and taxonomy information |
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| >gi|340725045|ref|XP_003400885.1| PREDICTED: ATP-citrate synthase-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350398404|ref|XP_003485182.1| PREDICTED: ATP-citrate synthase-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|281363477|ref|NP_725514.2| ATP citrate lyase, isoform F [Drosophila melanogaster] gi|272432504|gb|AAM70940.2| ATP citrate lyase, isoform F [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|194882681|ref|XP_001975439.1| GG22311 [Drosophila erecta] gi|190658626|gb|EDV55839.1| GG22311 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|194756204|ref|XP_001960369.1| GF13329 [Drosophila ananassae] gi|190621667|gb|EDV37191.1| GF13329 [Drosophila ananassae] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 806 | ||||||
| FB|FBgn0020236 | 1112 | ATPCL "ATP citrate lyase" [Dro | 0.749 | 0.543 | 0.806 | 0.0 | |
| UNIPROTKB|F1Q3V2 | 1139 | ACLY "Uncharacterized protein" | 0.775 | 0.548 | 0.744 | 0.0 | |
| UNIPROTKB|G3V888 | 1101 | Acly "ATP citrate lyase, isofo | 0.775 | 0.567 | 0.744 | 8.69999998136e-317 | |
| UNIPROTKB|J9NST7 | 1091 | ACLY "Uncharacterized protein" | 0.745 | 0.550 | 0.768 | 4.39999997751e-316 | |
| UNIPROTKB|P53396 | 1101 | ACLY "ATP-citrate synthase" [H | 0.775 | 0.567 | 0.737 | 1.40000000183e-315 | |
| UNIPROTKB|G3V9G4 | 1091 | Acly "ATP citrate lyase, isofo | 0.745 | 0.550 | 0.768 | 2.90000000202e-315 | |
| MGI|MGI:103251 | 1091 | Acly "ATP citrate lyase" [Mus | 0.745 | 0.550 | 0.768 | 3.69999999883e-315 | |
| UNIPROTKB|F1LQS4 | 1100 | Acly "ATP-citrate synthase" [R | 0.775 | 0.568 | 0.744 | 4.80000000062e-315 | |
| UNIPROTKB|Q32PF2 | 1091 | ACLY "ATP-citrate synthase" [B | 0.745 | 0.550 | 0.765 | 1.3e-314 | |
| RGD|2018 | 1100 | Acly "ATP citrate lyase" [Ratt | 0.775 | 0.568 | 0.744 | 1.99999999993e-314 |
| FB|FBgn0020236 ATPCL "ATP citrate lyase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2564 (907.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 487/604 (80%), Positives = 533/604 (88%)
Query: 203 TKAIVWGMQTRAVQSMLDFDFVCRRSEPSVAAMVYPFTGDHKLKFYWGHKEVLIPVYKKM 262
TKAIVWGMQ RAVQSMLDFDF+CRR EPSV AMVYPFTGDHK K+YWGHKE+LIPVYKKM
Sbjct: 509 TKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIPVYKKM 568
Query: 263 EDAMSKNKDADVLVNFASLRSAYDSTIETLGFPQIRSIAIIAEGIPENMTRKLNLLAKEK 322
DA+ K+K+ DV+VNFAS+RSAY+ST+E L FPQIR++AIIAEGIPENMTRKL + A +K
Sbjct: 569 SDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLIIEADKK 628
Query: 323 GVSIIGPATVGGLKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISK 382
GV+IIGPATVGG+KPGCFKIGNTGGM+DNILHSKLYRPGSVAYVSRSGGMSNELNNIISK
Sbjct: 629 GVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNIISK 688
Query: 383 ATNGVYEGVAIGGDRYPGTTFMDHILRYQADPEVKMIXXXXXXXXXXXXXXCAALKDKRI 442
AT+GV EG+AIGGDRYPG+TFMDHILRYQADPE K+I CAALKD RI
Sbjct: 689 ATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAALKDGRI 748
Query: 443 TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGDI 502
TKPLVAWCIGTCASMFTSEVQFGHAGSCANSD ETA KNK L AGA+VP SFDTLG++
Sbjct: 749 TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPDSFDTLGEL 808
Query: 503 IGSVYKDLVSRGDIVXXXXXXXXXXXMDYSWARELGLIRKPASFMTSICDERGQELLYAG 562
I VY +LV G +V MDYSWARELGLIRKPASFMTSICDERGQEL+YAG
Sbjct: 809 IHHVYGELVKTGRVVPKEEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELIYAG 868
Query: 563 MPISDVLKQNMGIGGVLSLLWFQRQLPPYVCKFLEMSLMVTADHGPAVSGAHNTIVCARA 622
MPIS+VL +++GIGGV+SLLWFQR LP YVCKF EM LMVTADHGPAVSGAHNTIVCARA
Sbjct: 869 MPISEVLSKDVGIGGVISLLWFQRCLPSYVCKFFEMCLMVTADHGPAVSGAHNTIVCARA 928
Query: 623 GKDLVSSLVSGLLTIGDRFGGALNDAAIQFSAAYDAGLIPMEFVNEMRKKGKLIMGIGHR 682
GKDLVSS+VSGLLTIGDRFGGAL+ +A QFS AYD L PMEFVN+MRK+GKLI+GIGHR
Sbjct: 929 GKDLVSSVVSGLLTIGDRFGGALDGSARQFSEAYDTNLHPMEFVNKMRKEGKLILGIGHR 988
Query: 683 VKSINNPDMRVKIIKEFVLQNFPTTPLLNYALEVEKITTSKKPNLILNVDGVIAVAFVDL 742
VKSINNPD+RVKIIKEFVL+NFP PLL YALEVEKITT+KKPNLILNVDGVIA AFVD+
Sbjct: 989 VKSINNPDVRVKIIKEFVLENFPACPLLKYALEVEKITTNKKPNLILNVDGVIATAFVDM 1048
Query: 743 LRHSGSFTREEAQEYVEMGAINGLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISYVLP 802
LR+SGSFT EEAQEY+ +GAIN LFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISYV+P
Sbjct: 1049 LRNSGSFTSEEAQEYINVGAINSLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISYVIP 1108
Query: 803 EQYN 806
EQYN
Sbjct: 1109 EQYN 1112
|
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| UNIPROTKB|F1Q3V2 ACLY "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3V888 Acly "ATP citrate lyase, isoform CRA_a" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NST7 ACLY "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P53396 ACLY "ATP-citrate synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3V9G4 Acly "ATP citrate lyase, isoform CRA_b" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:103251 Acly "ATP citrate lyase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LQS4 Acly "ATP-citrate synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q32PF2 ACLY "ATP-citrate synthase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|2018 Acly "ATP citrate lyase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P53585 | ACLY_CAEEL | 2, ., 3, ., 3, ., 8 | 0.6675 | 0.8846 | 0.6446 | yes | N/A |
| Q32PF2 | ACLY_BOVIN | 2, ., 3, ., 3, ., 8 | 0.7185 | 0.8970 | 0.6626 | yes | N/A |
| Q93VT8 | ACLB1_ORYSJ | 2, ., 3, ., 3, ., 8 | 0.5293 | 0.7394 | 0.9802 | yes | N/A |
| Q9FGX1 | ACLB2_ARATH | 2, ., 3, ., 3, ., 8 | 0.5259 | 0.7394 | 0.9802 | yes | N/A |
| Q9C522 | ACLB1_ARATH | 2, ., 3, ., 3, ., 8 | 0.5293 | 0.7394 | 0.9802 | yes | N/A |
| Q9P7W3 | ACL1_SCHPO | 2, ., 3, ., 3, ., 8 | 0.6522 | 0.7456 | 0.9772 | yes | N/A |
| Q54YA0 | ACLY_DICDI | 2, ., 3, ., 3, ., 8 | 0.5341 | 0.7456 | 0.9662 | yes | N/A |
| Q91V92 | ACLY_MOUSE | 2, ., 3, ., 3, ., 8 | 0.7327 | 0.8821 | 0.6516 | yes | N/A |
| P16638 | ACLY_RAT | 2, ., 3, ., 3, ., 8 | 0.7093 | 0.8957 | 0.6563 | yes | N/A |
| P53396 | ACLY_HUMAN | 2, ., 3, ., 3, ., 8 | 0.7080 | 0.8970 | 0.6566 | yes | N/A |
| Q2TCH3 | ACLY_SHEEP | 2, ., 3, ., 3, ., 8 | 0.7105 | 0.8970 | 0.6566 | N/A | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.3 | 0.963 |
| 3rd Layer | 2.3.3.8 | 0.946 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 806 | |||
| PLN02522 | 608 | PLN02522, PLN02522, ATP citrate (pro-S)-lyase | 0.0 | |
| cd06100 | 227 | cd06100, CCL_ACL-C, Citryl-CoA lyase (CCL), the C- | 1e-88 | |
| COG0074 | 293 | COG0074, SucD, Succinyl-CoA synthetase, alpha subu | 3e-63 | |
| COG0372 | 390 | COG0372, GltA, Citrate synthase [Energy production | 1e-35 | |
| TIGR01019 | 286 | TIGR01019, sucCoAalpha, succinyl-CoA synthetase, a | 5e-32 | |
| PTZ00187 | 317 | PTZ00187, PTZ00187, succinyl-CoA synthetase alpha | 3e-31 | |
| PRK05678 | 291 | PRK05678, PRK05678, succinyl-CoA synthetase subuni | 2e-28 | |
| PLN02235 | 423 | PLN02235, PLN02235, ATP citrate (pro-S)-lyase | 6e-26 | |
| pfam00549 | 128 | pfam00549, Ligase_CoA, CoA-ligase | 1e-24 | |
| PLN00125 | 300 | PLN00125, PLN00125, Succinyl-CoA ligase [GDP-formi | 2e-22 | |
| cd06101 | 265 | cd06101, citrate_synt, Citrate synthase (CS) catal | 1e-19 | |
| PRK06224 | 263 | PRK06224, PRK06224, citrate synthase; Provisional | 2e-19 | |
| cd06099 | 213 | cd06099, CS_ACL-C_CCL, Citrate synthase (CS), citr | 8e-18 | |
| pfam00285 | 352 | pfam00285, Citrate_synt, Citrate synthase | 3e-17 | |
| PLN02235 | 423 | PLN02235, PLN02235, ATP citrate (pro-S)-lyase | 1e-12 | |
| cd06118 | 358 | cd06118, citrate_synt_like_1, Citrate synthase (CS | 2e-12 | |
| PLN02456 | 455 | PLN02456, PLN02456, citrate synthase | 1e-11 | |
| cd06108 | 363 | cd06108, Ec2MCS_like, Escherichia coli (Ec) 2-meth | 3e-08 | |
| TIGR01800 | 368 | TIGR01800, cit_synth_II, 2-methylcitrate synthase/ | 2e-07 | |
| cd06107 | 382 | cd06107, EcCS_AthCS-per_like, Escherichia coli (Ec | 5e-06 | |
| cd06116 | 384 | cd06116, CaCS_like, Chloroflexus aurantiacus (Ca) | 5e-06 | |
| COG0045 | 387 | COG0045, SucC, Succinyl-CoA synthetase, beta subun | 6e-06 | |
| cd06114 | 400 | cd06114, EcCS_like, Escherichia coli (Ec) citrate | 1e-05 | |
| PRK05614 | 419 | PRK05614, gltA, type II citrate synthase; Reviewed | 2e-05 | |
| cd06115 | 410 | cd06115, AthCS_per_like, Arabidopsis thaliana (Ath | 6e-05 | |
| pfam02629 | 96 | pfam02629, CoA_binding, CoA binding domain | 1e-04 | |
| smart00881 | 100 | smart00881, CoA_binding, CoA binding domain | 4e-04 | |
| COG1042 | 598 | COG1042, COG1042, Acyl-CoA synthetase (NDP forming | 4e-04 | |
| cd06110 | 356 | cd06110, BSuCS-II_like, Bacillus subtilis (Bs) cit | 5e-04 | |
| cd06109 | 349 | cd06109, BsCS-I_like, Bacillus subtilis (Bs) citra | 7e-04 | |
| PRK14037 | 377 | PRK14037, PRK14037, citrate synthase; Provisional | 0.001 | |
| cd06112 | 373 | cd06112, citrate_synt_like_1_1, Citrate synthase ( | 0.001 | |
| TIGR02717 | 447 | TIGR02717, AcCoA-syn-alpha, acetyl coenzyme A synt | 0.002 | |
| cd06102 | 282 | cd06102, citrate_synt_like_2, Citrate synthase (CS | 0.003 |
| >gnl|CDD|178137 PLN02522, PLN02522, ATP citrate (pro-S)-lyase | Back alignment and domain information |
|---|
Score = 886 bits (2292), Expect = 0.0
Identities = 321/599 (53%), Positives = 432/599 (72%), Gaps = 1/599 (0%)
Query: 202 QTKAIVWGMQTRAVQSMLDFDFVCRRSEPSVAAMVYPFTGDHKLKFYWGHKEVLIPVYKK 261
T+A+ + + VQ MLDFDF+C R PSVA ++ P + K ++G +E+ IPV+
Sbjct: 10 TTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINP-GSEGFQKLFFGQEEIAIPVHGS 68
Query: 262 MEDAMSKNKDADVLVNFASLRSAYDSTIETLGFPQIRSIAIIAEGIPENMTRKLNLLAKE 321
+E A + ADV +NFAS RSA S++E L P IR +AIIAEG+PE+ T++L A+
Sbjct: 69 IEAACKAHPTADVFINFASFRSAAASSMEALKQPTIRVVAIIAEGVPESDTKQLIAYARA 128
Query: 322 KGVSIIGPATVGGLKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELNNIIS 381
+IGPATVGG++ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSNE+ N+I+
Sbjct: 129 NNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIQCKLYRPGSVGFVSKSGGMSNEMYNVIA 188
Query: 382 KATNGVYEGVAIGGDRYPGTTFMDHILRYQADPEVKMIVLLGEVGGVEEYEVCAALKDKR 441
+ T+G+YEG+AIGGD +PG+T DH+LR+ P++KMIV+LGE+GG +EY + ALK +
Sbjct: 189 RVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSLVEALKQGK 248
Query: 442 ITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGD 501
++KP+VAW GTCA +F SEVQFGHAG+ + D E+A KNK+L AGA VP+SF+ L
Sbjct: 249 VSKPVVAWVSGTCARLFKSEVQFGHAGAKSGGDMESAQAKNKALKDAGAIVPTSFEALEA 308
Query: 502 IIGSVYKDLVSRGDIVPQPELPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELLYA 561
I ++ LV G I+P E+ PP +P D + A + G +R P +++I D+RG+E YA
Sbjct: 309 AIKETFEKLVEEGKIIPVKEVTPPQIPEDLNSAIKSGKVRAPTHIVSTISDDRGEEPCYA 368
Query: 562 GMPISDVLKQNMGIGGVLSLLWFQRQLPPYVCKFLEMSLMVTADHGPAVSGAHNTIVCAR 621
G+P+S +++++ G+G V+SLLWF+R LP Y KF+EM +M+ ADHGP VSGAHNTIV AR
Sbjct: 369 GVPMSSIIEKDYGVGDVISLLWFKRSLPRYCTKFIEMCIMLCADHGPCVSGAHNTIVTAR 428
Query: 622 AGKDLVSSLVSGLLTIGDRFGGALNDAAIQFSAAYDAGLIPMEFVNEMRKKGKLIMGIGH 681
AGKDLVSSLVSGLLTIG RFGGA++DAA F AYD GL P EFV M+KKG + GIGH
Sbjct: 429 AGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVPGIGH 488
Query: 682 RVKSINNPDMRVKIIKEFVLQNFPTTPLLNYALEVEKITTSKKPNLILNVDGVIAVAFVD 741
R+KS +N D RV++++++ +FP+ + YA++VE T SK NL+LNVDG I F+D
Sbjct: 489 RIKSRDNRDKRVELLQKYARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLD 548
Query: 742 LLRHSGSFTREEAQEYVEMGAINGLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISYV 800
LL SG FT++E E VE+G +NGLFVL RSIG IGH DQKRLKQ LYRHPW+D+ Y
Sbjct: 549 LLAGSGMFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607
|
Length = 608 |
| >gnl|CDD|99854 cd06100, CCL_ACL-C, Citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL | Back alignment and domain information |
|---|
| >gnl|CDD|223152 COG0074, SucD, Succinyl-CoA synthetase, alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|223449 COG0372, GltA, Citrate synthase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|130091 TIGR01019, sucCoAalpha, succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|240307 PTZ00187, PTZ00187, succinyl-CoA synthetase alpha subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180194 PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|177879 PLN02235, PLN02235, ATP citrate (pro-S)-lyase | Back alignment and domain information |
|---|
| >gnl|CDD|215988 pfam00549, Ligase_CoA, CoA-ligase | Back alignment and domain information |
|---|
| >gnl|CDD|215066 PLN00125, PLN00125, Succinyl-CoA ligase [GDP-forming] subunit alpha | Back alignment and domain information |
|---|
| >gnl|CDD|99855 cd06101, citrate_synt, Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >gnl|CDD|235748 PRK06224, PRK06224, citrate synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|99853 cd06099, CS_ACL-C_CCL, Citrate synthase (CS), citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL | Back alignment and domain information |
|---|
| >gnl|CDD|215837 pfam00285, Citrate_synt, Citrate synthase | Back alignment and domain information |
|---|
| >gnl|CDD|177879 PLN02235, PLN02235, ATP citrate (pro-S)-lyase | Back alignment and domain information |
|---|
| >gnl|CDD|99871 cd06118, citrate_synt_like_1, Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >gnl|CDD|215250 PLN02456, PLN02456, citrate synthase | Back alignment and domain information |
|---|
| >gnl|CDD|99861 cd06108, Ec2MCS_like, Escherichia coli (Ec) 2-methylcitrate synthase (2MCS)_like | Back alignment and domain information |
|---|
| >gnl|CDD|130859 TIGR01800, cit_synth_II, 2-methylcitrate synthase/citrate synthase II | Back alignment and domain information |
|---|
| >gnl|CDD|99860 cd06107, EcCS_AthCS-per_like, Escherichia coli (Ec) citrate synthase (CS) gltA and Arabidopsis thaliana (Ath) peroxisomal (Per) CS_like | Back alignment and domain information |
|---|
| >gnl|CDD|99869 cd06116, CaCS_like, Chloroflexus aurantiacus (Ca) citrate synthase (CS)_like | Back alignment and domain information |
|---|
| >gnl|CDD|223123 COG0045, SucC, Succinyl-CoA synthetase, beta subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|99867 cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like | Back alignment and domain information |
|---|
| >gnl|CDD|180164 PRK05614, gltA, type II citrate synthase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|99868 cd06115, AthCS_per_like, Arabidopsis thaliana (Ath) peroxisomal (Per) CS_like | Back alignment and domain information |
|---|
| >gnl|CDD|202320 pfam02629, CoA_binding, CoA binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|214881 smart00881, CoA_binding, CoA binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|223972 COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|99863 cd06110, BSuCS-II_like, Bacillus subtilis (Bs) citrate synthase (CS)-II_like | Back alignment and domain information |
|---|
| >gnl|CDD|99862 cd06109, BsCS-I_like, Bacillus subtilis (Bs) citrate synthase CS-I_like | Back alignment and domain information |
|---|
| >gnl|CDD|184470 PRK14037, PRK14037, citrate synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|99865 cd06112, citrate_synt_like_1_1, Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >gnl|CDD|131764 TIGR02717, AcCoA-syn-alpha, acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
| >gnl|CDD|99856 cd06102, citrate_synt_like_2, Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 806 | |||
| PLN02522 | 608 | ATP citrate (pro-S)-lyase | 100.0 | |
| KOG1254|consensus | 600 | 100.0 | ||
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 100.0 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 100.0 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 100.0 | |
| PTZ00187 | 317 | succinyl-CoA synthetase alpha subunit; Provisional | 100.0 | |
| PLN00125 | 300 | Succinyl-CoA ligase [GDP-forming] subunit alpha | 100.0 | |
| COG0372 | 390 | GltA Citrate synthase [Energy production and conve | 100.0 | |
| PRK06224 | 263 | citrate synthase; Provisional | 100.0 | |
| cd06108 | 363 | Ec2MCS_like Escherichia coli (Ec) 2-methylcitrate | 100.0 | |
| cd06116 | 384 | CaCS_like Chloroflexus aurantiacus (Ca) citrate sy | 100.0 | |
| cd06101 | 265 | citrate_synt Citrate synthase (CS) catalyzes the c | 100.0 | |
| PRK12351 | 378 | methylcitrate synthase; Provisional | 100.0 | |
| cd06115 | 410 | AthCS_per_like Arabidopsis thaliana (Ath) peroxiso | 100.0 | |
| PRK14036 | 377 | citrate synthase; Provisional | 100.0 | |
| cd06102 | 282 | citrate_synt_like_2 Citrate synthase (CS) catalyze | 100.0 | |
| cd06117 | 366 | Ec2MCS_like_1 Subgroup of Escherichia coli (Ec) 2- | 100.0 | |
| TIGR01798 | 412 | cit_synth_I citrate synthase I (hexameric type). T | 100.0 | |
| PRK14034 | 372 | citrate synthase; Provisional | 100.0 | |
| PRK14035 | 371 | citrate synthase; Provisional | 100.0 | |
| PRK14037 | 377 | citrate synthase; Provisional | 100.0 | |
| cd06112 | 373 | citrate_synt_like_1_1 Citrate synthase (CS) cataly | 100.0 | |
| cd06109 | 349 | BsCS-I_like Bacillus subtilis (Bs) citrate synthas | 100.0 | |
| PRK12350 | 353 | citrate synthase 2; Provisional | 100.0 | |
| cd06107 | 382 | EcCS_AthCS-per_like Escherichia coli (Ec) citrate | 100.0 | |
| COG0074 | 293 | SucD Succinyl-CoA synthetase, alpha subunit [Energ | 100.0 | |
| cd06111 | 362 | DsCS_like Cold-active citrate synthase (CS) from a | 100.0 | |
| TIGR01793 | 427 | cit_synth_euk citrate (Si)-synthase, eukaryotic. T | 100.0 | |
| PRK05614 | 419 | gltA type II citrate synthase; Reviewed | 100.0 | |
| PRK14032 | 447 | citrate synthase; Provisional | 100.0 | |
| PLN02456 | 455 | citrate synthase | 100.0 | |
| PRK09569 | 437 | type I citrate synthase; Reviewed | 100.0 | |
| cd06106 | 428 | ScCit3_like Saccharomyces cerevisiae (Sc) 2-methyl | 100.0 | |
| PRK12349 | 369 | citrate synthase 3; Provisional | 100.0 | |
| cd06105 | 427 | ScCit1-2_like Saccharomyces cerevisiae (Sc) citrat | 100.0 | |
| cd06114 | 400 | EcCS_like Escherichia coli (Ec) citrate synthase ( | 100.0 | |
| cd06099 | 213 | CS_ACL-C_CCL Citrate synthase (CS), citryl-CoA lya | 100.0 | |
| PRK14033 | 375 | citrate synthase; Provisional | 100.0 | |
| TIGR01800 | 368 | cit_synth_II 2-methylcitrate synthase/citrate synt | 100.0 | |
| cd06103 | 426 | ScCS-like Saccharomyces cerevisiae (Sc) citrate sy | 100.0 | |
| cd06110 | 356 | BSuCS-II_like Bacillus subtilis (Bs) citrate synth | 100.0 | |
| cd06113 | 406 | citrate_synt_like_1_2 Citrate synthase (CS) cataly | 100.0 | |
| cd06118 | 358 | citrate_synt_like_1 Citrate synthase (CS) catalyze | 100.0 | |
| COG1042 | 598 | Acyl-CoA synthetase (NDP forming) [Energy producti | 100.0 | |
| PF00285 | 356 | Citrate_synt: Citrate synthase; InterPro: IPR00202 | 100.0 | |
| cd06100 | 227 | CCL_ACL-C Citryl-CoA lyase (CCL), the C-terminal p | 100.0 | |
| KOG1255|consensus | 329 | 100.0 | ||
| KOG2617|consensus | 458 | 100.0 | ||
| PLN02235 | 423 | ATP citrate (pro-S)-lyase | 100.0 | |
| PRK06091 | 555 | membrane protein FdrA; Validated | 100.0 | |
| PF13607 | 138 | Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin | 100.0 | |
| COG0045 | 387 | SucC Succinyl-CoA synthetase, beta subunit [Energy | 99.97 | |
| PLN00124 | 422 | succinyl-CoA ligase [GDP-forming] subunit beta; Pr | 99.93 | |
| PRK14046 | 392 | malate--CoA ligase subunit beta; Provisional | 99.79 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 99.78 | |
| KOG1447|consensus | 412 | 99.78 | ||
| KOG2799|consensus | 434 | 99.75 | ||
| PF08442 | 202 | ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 | 99.74 | |
| KOG1254|consensus | 600 | 99.69 | ||
| TIGR01016 | 386 | sucCoAbeta succinyl-CoA synthetase, beta subunit. | 99.66 | |
| PRK00696 | 388 | sucC succinyl-CoA synthetase subunit beta; Provisi | 99.6 | |
| PF00549 | 153 | Ligase_CoA: CoA-ligase; InterPro: IPR005811 This e | 99.06 | |
| COG1832 | 140 | Predicted CoA-binding protein [General function pr | 98.94 | |
| PF02629 | 96 | CoA_binding: CoA binding domain; InterPro: IPR0037 | 98.19 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 97.89 | |
| PF00549 | 153 | Ligase_CoA: CoA-ligase; InterPro: IPR005811 This e | 97.86 | |
| TIGR01016 | 386 | sucCoAbeta succinyl-CoA synthetase, beta subunit. | 97.2 | |
| PRK00696 | 388 | sucC succinyl-CoA synthetase subunit beta; Provisi | 97.19 | |
| PRK12349 | 369 | citrate synthase 3; Provisional | 97.11 | |
| PRK14046 | 392 | malate--CoA ligase subunit beta; Provisional | 96.93 | |
| cd06118 | 358 | citrate_synt_like_1 Citrate synthase (CS) catalyze | 96.9 | |
| PRK14036 | 377 | citrate synthase; Provisional | 96.75 | |
| PF13549 | 222 | ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A. | 96.61 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.55 | |
| PLN00124 | 422 | succinyl-CoA ligase [GDP-forming] subunit beta; Pr | 96.55 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.52 | |
| COG0045 | 387 | SucC Succinyl-CoA synthetase, beta subunit [Energy | 96.46 | |
| TIGR01800 | 368 | cit_synth_II 2-methylcitrate synthase/citrate synt | 96.44 | |
| cd06112 | 373 | citrate_synt_like_1_1 Citrate synthase (CS) cataly | 96.44 | |
| PRK14032 | 447 | citrate synthase; Provisional | 96.43 | |
| PRK14037 | 377 | citrate synthase; Provisional | 96.41 | |
| cd06109 | 349 | BsCS-I_like Bacillus subtilis (Bs) citrate synthas | 96.23 | |
| cd06110 | 356 | BSuCS-II_like Bacillus subtilis (Bs) citrate synth | 96.22 | |
| cd06108 | 363 | Ec2MCS_like Escherichia coli (Ec) 2-methylcitrate | 96.2 | |
| PRK06091 | 555 | membrane protein FdrA; Validated | 96.18 | |
| ), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071 | 194 | GARS_A: Phosphoribosylglycinamide synthetase, ATP- | 96.1 | |
| PRK12351 | 378 | methylcitrate synthase; Provisional | 96.03 | |
| cd06111 | 362 | DsCS_like Cold-active citrate synthase (CS) from a | 96.02 | |
| cd06113 | 406 | citrate_synt_like_1_2 Citrate synthase (CS) cataly | 96.01 | |
| cd06115 | 410 | AthCS_per_like Arabidopsis thaliana (Ath) peroxiso | 95.87 | |
| cd06116 | 384 | CaCS_like Chloroflexus aurantiacus (Ca) citrate sy | 95.78 | |
| PRK14035 | 371 | citrate synthase; Provisional | 95.75 | |
| PRK14033 | 375 | citrate synthase; Provisional | 95.74 | |
| cd06117 | 366 | Ec2MCS_like_1 Subgroup of Escherichia coli (Ec) 2- | 95.6 | |
| TIGR01798 | 412 | cit_synth_I citrate synthase I (hexameric type). T | 95.39 | |
| PRK09569 | 437 | type I citrate synthase; Reviewed | 95.33 | |
| PRK14034 | 372 | citrate synthase; Provisional | 95.25 | |
| PLN02456 | 455 | citrate synthase | 95.2 | |
| cd06105 | 427 | ScCit1-2_like Saccharomyces cerevisiae (Sc) citrat | 95.08 | |
| cd06107 | 382 | EcCS_AthCS-per_like Escherichia coli (Ec) citrate | 95.08 | |
| cd06103 | 426 | ScCS-like Saccharomyces cerevisiae (Sc) citrate sy | 95.02 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 95.0 | |
| COG0151 | 428 | PurD Phosphoribosylamine-glycine ligase [Nucleotid | 94.92 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 94.89 | |
| PLN02235 | 423 | ATP citrate (pro-S)-lyase | 94.83 | |
| PRK05614 | 419 | gltA type II citrate synthase; Reviewed | 94.72 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 94.67 | |
| cd06114 | 400 | EcCS_like Escherichia coli (Ec) citrate synthase ( | 94.51 | |
| cd06106 | 428 | ScCit3_like Saccharomyces cerevisiae (Sc) 2-methyl | 94.17 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 93.67 | |
| TIGR01793 | 427 | cit_synth_euk citrate (Si)-synthase, eukaryotic. T | 93.49 | |
| PRK00885 | 420 | phosphoribosylamine--glycine ligase; Provisional | 92.85 | |
| PRK13790 | 379 | phosphoribosylamine--glycine ligase; Provisional | 92.8 | |
| PF00285 | 356 | Citrate_synt: Citrate synthase; InterPro: IPR00202 | 92.67 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 92.59 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 92.29 | |
| PRK13789 | 426 | phosphoribosylamine--glycine ligase; Provisional | 92.08 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 92.07 | |
| TIGR02130 | 275 | dapB_plant dihydrodipicolinate reductase. This nar | 91.14 | |
| COG2344 | 211 | AT-rich DNA-binding protein [General function pred | 90.74 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 90.46 | |
| TIGR03855 | 229 | NAD_NadX aspartate dehydrogenase. Members of this | 90.29 | |
| PLN02257 | 434 | phosphoribosylamine--glycine ligase | 90.22 | |
| TIGR02068 | 864 | cya_phycin_syn cyanophycin synthetase. Cyanophycin | 89.45 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 88.96 | |
| TIGR01761 | 343 | thiaz-red thiazolinyl imide reductase. This reduct | 88.46 | |
| PRK14016 | 727 | cyanophycin synthetase; Provisional | 88.16 | |
| ), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844 | 100 | GARS_N: Phosphoribosylglycinamide synthetase, N do | 88.13 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 86.89 | |
| PRK01372 | 304 | ddl D-alanine--D-alanine ligase; Reviewed | 86.86 | |
| cd07018 | 222 | S49_SppA_67K_type Signal peptide peptidase A (SppA | 86.66 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 86.51 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 86.09 | |
| PRK06395 | 435 | phosphoribosylamine--glycine ligase; Provisional | 85.79 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 85.25 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 84.89 | |
| PRK12350 | 353 | citrate synthase 2; Provisional | 84.63 | |
| cd07022 | 214 | S49_Sppa_36K_type Signal peptide peptidase A (SppA | 84.38 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 84.04 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 83.85 | |
| PRK02471 | 752 | bifunctional glutamate--cysteine ligase/glutathion | 82.88 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 81.83 | |
| PRK11579 | 346 | putative oxidoreductase; Provisional | 81.41 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 81.38 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 80.23 | |
| cd00394 | 161 | Clp_protease_like Caseinolytic protease (ClpP) is | 80.01 |
| >PLN02522 ATP citrate (pro-S)-lyase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-144 Score=1241.53 Aligned_cols=602 Identities=53% Similarity=0.928 Sum_probs=576.6
Q ss_pred CCCCCceEEEEccChhHHHhhhhcccccccCCCcccceeEeecCCCcccccccceeecccccccHHHHhccCCCeeEEEe
Q psy16953 198 GGQEQTKAIVWGMQTRAVQSMLDFDFVCRRSEPSVAAMVYPFTGDHKLKFYWGHKEVLIPVYKKMEDAMSKNKDADVLVN 277 (806)
Q Consensus 198 ~~~~~t~v~V~G~~~r~~~~ll~~gf~~~~~~~~~~g~iypvnp~~~~~~~~g~~~i~~p~y~sv~daip~~~Dlavivi 277 (806)
.|+++|+.+|||++.+++|.|+||+|+|+|++|||.+.||| ..+|+||||||.+++++|+|.|++||+.+++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~iPVf~tv~eA~~~~~~~~~~vi 84 (608)
T PLN02522 6 LFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINP-GSEGFQKLFFGQEEIAIPVHGSIEAACKAHPTADVFIN 84 (608)
T ss_pred eecCCceeEEEcCcHHHHHhhhccceeccCCCCeeEEEEcC-CCCcceeEecCCEeeCccccchHHHHHHhCCCCcEEEE
Confidence 38899999999999999999999999999999999999999 55899999999999999999999999999989999999
Q ss_pred ecCChhhHHHHHHHhcCCCCCEEEEEcCCCCHHHHHHHHHHHHHcCCeEEccCccccccCCccccccCCCCcccccccCC
Q psy16953 278 FASLRSAYDSTIETLGFPQIRSIAIIAEGIPENMTRKLNLLAKEKGVSIIGPATVGGLKPGCFKIGNTGGMMDNILHSKL 357 (806)
Q Consensus 278 ~~~~~~~~~~~le~~~~~gvk~~viis~Gf~E~~~~~l~~~a~~~giriiGPN~~Gii~p~~~~ig~~~g~~~~~~~~~~ 357 (806)
|+||+++.++++|+|.++|||.+||||+||+|.++++|+++|+++|+||+||||+|++||+++++|++.+...+..+...
T Consensus 85 fvp~~~a~da~lEa~~a~GIk~~VIiteGfpe~d~~~l~~~Ar~~g~rlIGPNc~Gii~p~~~kig~~~~~~~~~~~~~~ 164 (608)
T PLN02522 85 FASFRSAAASSMEALKQPTIRVVAIIAEGVPESDTKQLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIQCKL 164 (608)
T ss_pred eCChHHhHHHHHHHHhhCCCCEEEEECCCCChhhHHHHHHHHHHcCCEEECCCCCeeEccCcccccccccccccccCcCC
Confidence 99999999999999998999999999999999999999999999999999999999999998899876654333444345
Q ss_pred CCCCCEEEEeCChhHHHHHHHHHHhcCCceeEEEeecCCCCCCCCHHHHHHHhhcCCCccEEEEEEccCCcchHHHHHHH
Q psy16953 358 YRPGSVAYVSRSGGMSNELNNIISKATNGVYEGVAIGGDRYPGTTFMDHILRYQADPEVKMIVLLGEVGGVEEYEVCAAL 437 (806)
Q Consensus 358 ~~~G~ValvSQSG~l~~~l~~~~~~~g~G~s~~vs~Gn~~~~d~~~~D~l~~l~~Dp~Tk~I~ly~Eigg~~d~~f~~a~ 437 (806)
++||+||+|||||+|++++++++.++|+|||++||+||+.+.|+++.|+|+||.+||+||+|++|+|||+..+++|++++
T Consensus 165 ~~pG~VgiVSqSGtL~~ei~~~~~~~GlG~S~~VsiGnd~~~g~~~~D~L~~~~~Dp~Tk~IvlygEiGg~~e~~f~ea~ 244 (608)
T PLN02522 165 YRPGSVGFVSKSGGMSNEMYNVIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSLVEAL 244 (608)
T ss_pred CCCCcEEEEeccHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEecCchhHHHHHHHH
Confidence 78999999999999999999999999999999999999977789999999999999999999999999888889999999
Q ss_pred HhcCCCCCEEEEEeCcCcCcCcccccccccCCcCCCCcccHHHHHHHHHHcCCcccCChhhHHHHHHHHHHhhhhCCccc
Q psy16953 438 KDKRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGDIIGSVYKDLVSRGDIV 517 (806)
Q Consensus 438 r~~~~~KPVV~lk~Grs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~qaGvi~v~~~~EL~~~~~all~~L~~~g~i~ 517 (806)
++++++||||+||+|||++++++++++|||||++|++..|+++|+++|||+|+++++|++||++.++.++++|+.+|+|+
T Consensus 245 ~~a~~~KPVVa~kaGrsa~~~~~~aa~gHtGAiag~~~~ta~~k~aAlr~aGv~vv~s~~El~~~~~~~~~~~~~~~~~~ 324 (608)
T PLN02522 245 KQGKVSKPVVAWVSGTCARLFKSEVQFGHAGAKSGGDMESAQAKNKALKDAGAIVPTSFEALEAAIKETFEKLVEEGKII 324 (608)
T ss_pred HHhcCCCCEEEEeccCCCccCccccccccccccccCCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHHHHHHhCCcee
Confidence 99889999999999999965578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccchHHhhcccccccccceeccccccccccccCCCCccccccCCCCHHHHHHHHHhcCCCChHHHHHHH
Q psy16953 518 PQPELPPPTVPMDYSWARELGLIRKPASFMTSICDERGQELLYAGMPISDVLKQNMGIGGVLSLLWFQRQLPPYVCKFLE 597 (806)
Q Consensus 518 ~~~~~P~~~~PMd~~~a~~~g~~r~~~~~~t~i~d~~~~~i~~~G~~i~~~i~~~~s~~~~~~~ll~g~~~~~~~~~~l~ 597 (806)
|.+|+|||..||||+||+|+|++||+++|+|+|||.+++++.||||||+|++++++||+++|++||+|++|+++++++||
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~I~~~~~~~~~~rG~~i~dlig~~~~f~~~~~ll~~g~~p~~~~~~~ld 404 (608)
T PLN02522 325 PVKEVTPPQIPEDLNSAIKSGKVRAPTHIVSTISDDRGEEPCYAGVPMSSIIEKDYGVGDVISLLWFKRSLPRYCTKFIE 404 (608)
T ss_pred ecCCCCCCCCCcchHHHHhCCceecccceEEEeecCCCCeeEECCccHHHHhccCCCHHHHHHHHHcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998789999999999999999999999999
Q ss_pred HHhhhccCCCCCCcccceeeeeeccCCChHHHHHHhhcccccccCChHHHHHHHHHHHhcCCCCHHHHHHHHHhcCCccc
Q psy16953 598 MSLMVTADHGPAVSGAHNTIVCARAGKDLVSSLVSGLLTIGDRFGGALNDAAIQFSAAYDAGLIPMEFVNEMRKKGKLIM 677 (806)
Q Consensus 598 ~~Lvl~ADHg~~~St~~aarv~aSa~adl~~avaagl~alG~~hGGA~~~a~~~l~e~~~~~~~~~~~v~~~~~~~~~ip 677 (806)
++||++||||+|+||+|++|+++||++|+|+|++|||+++||+||||++.|++||+++.+++.+++++|++++++|++||
T Consensus 405 ~~Lvl~ADHG~~aSt~~aarv~AStg~dl~savaaGl~alGp~hGGA~e~a~~~l~ei~~~~~~~~~~V~~~~~~~~~Ip 484 (608)
T PLN02522 405 MCIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLTPYEFVEGMKKKGIRVP 484 (608)
T ss_pred HHHHHhccCCCCccHHHHHHHhhccCCcHHHHHHHHHHhcCCcccchHHHHHHHHHHHhccccCHHHHHHHHHhCCCccc
Confidence 99999999999999978999999999999999999999999999999999999999998666689999999999999999
Q ss_pred ccCCCCCCCCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCCCCccCcHhHHHHHHHHHhhhhcCCCChHHHHhh
Q psy16953 678 GIGHRVKSINNPDMRVKIIKEFVLQNFPTTPLLNYALEVEKITTSKKPNLILNVDGVIAVAFVDLLRHSGSFTREEAQEY 757 (806)
Q Consensus 678 GfGH~vy~~~~~DPRa~~L~~~~~~~~~~~~~~~~a~~ve~~~~~~~~~l~pNvD~~~a~~~~~Lg~~~glft~ee~~~~ 757 (806)
|||||+|+.+++|||+++|++++++++..++++++++++|+++.+++++|+||||||+|+++++||+|+++||++|+.||
T Consensus 485 GFGHrvy~~~~~DpRa~~L~~~~~~~~~~~~~~~~a~~vE~~~~~~~k~L~~NVDga~a~i~~~lg~p~~~ft~~e~~~~ 564 (608)
T PLN02522 485 GIGHRIKSRDNRDKRVELLQKYARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEI 564 (608)
T ss_pred cCCCCCCCCCCCChhHHHHHHHHHHhccccHHHHHHHHHHHHHhhccCCCCcCcHhHHHHHHHHcCCCcccCcccccccc
Confidence 99999997778899999999999999889999999999999877767899999999999999999999999999999999
Q ss_pred hhccccceehhhhhhhhhHHhHHHHhhcCCCcccCCCCcceec
Q psy16953 758 VEMGAINGLFVLGRSIGFIGHYMDQKRLKQGLYRHPWDDISYV 800 (806)
Q Consensus 758 i~~~~~~~lF~l~R~~G~iAH~~Eq~~~~~~i~Rp~~~~i~Y~ 800 (806)
|.+++++++|++||++||+||++||+++++++||++|++|+|+
T Consensus 565 ~~~~~~~~lF~l~R~~GwiAH~~Eq~~~~~~~~r~~~~~i~y~ 607 (608)
T PLN02522 565 VEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607 (608)
T ss_pred ccccccceEEEeehHHHHHHHHHHHHHhhCCcccCchhhcccc
Confidence 9999999999999999999999999999999999999999996
|
|
| >KOG1254|consensus | Back alignment and domain information |
|---|
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
| >PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional | Back alignment and domain information |
|---|
| >PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha | Back alignment and domain information |
|---|
| >COG0372 GltA Citrate synthase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK06224 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06108 Ec2MCS_like Escherichia coli (Ec) 2-methylcitrate synthase (2MCS)_like | Back alignment and domain information |
|---|
| >cd06116 CaCS_like Chloroflexus aurantiacus (Ca) citrate synthase (CS)_like | Back alignment and domain information |
|---|
| >cd06101 citrate_synt Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >PRK12351 methylcitrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06115 AthCS_per_like Arabidopsis thaliana (Ath) peroxisomal (Per) CS_like | Back alignment and domain information |
|---|
| >PRK14036 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06102 citrate_synt_like_2 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >cd06117 Ec2MCS_like_1 Subgroup of Escherichia coli (Ec) 2-methylcitrate synthase (2MCS)_like | Back alignment and domain information |
|---|
| >TIGR01798 cit_synth_I citrate synthase I (hexameric type) | Back alignment and domain information |
|---|
| >PRK14034 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14035 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14037 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06112 citrate_synt_like_1_1 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >cd06109 BsCS-I_like Bacillus subtilis (Bs) citrate synthase CS-I_like | Back alignment and domain information |
|---|
| >PRK12350 citrate synthase 2; Provisional | Back alignment and domain information |
|---|
| >cd06107 EcCS_AthCS-per_like Escherichia coli (Ec) citrate synthase (CS) gltA and Arabidopsis thaliana (Ath) peroxisomal (Per) CS_like | Back alignment and domain information |
|---|
| >COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd06111 DsCS_like Cold-active citrate synthase (CS) from an Antarctic bacterial strain DS2-3R (Ds)-like | Back alignment and domain information |
|---|
| >TIGR01793 cit_synth_euk citrate (Si)-synthase, eukaryotic | Back alignment and domain information |
|---|
| >PRK05614 gltA type II citrate synthase; Reviewed | Back alignment and domain information |
|---|
| >PRK14032 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02456 citrate synthase | Back alignment and domain information |
|---|
| >PRK09569 type I citrate synthase; Reviewed | Back alignment and domain information |
|---|
| >cd06106 ScCit3_like Saccharomyces cerevisiae (Sc) 2-methylcitrate synthase Cit3-like | Back alignment and domain information |
|---|
| >PRK12349 citrate synthase 3; Provisional | Back alignment and domain information |
|---|
| >cd06105 ScCit1-2_like Saccharomyces cerevisiae (Sc) citrate synthases Cit1-2_like | Back alignment and domain information |
|---|
| >cd06114 EcCS_like Escherichia coli (Ec) citrate synthase (CS) GltA_like | Back alignment and domain information |
|---|
| >cd06099 CS_ACL-C_CCL Citrate synthase (CS), citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL | Back alignment and domain information |
|---|
| >PRK14033 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01800 cit_synth_II 2-methylcitrate synthase/citrate synthase II | Back alignment and domain information |
|---|
| >cd06103 ScCS-like Saccharomyces cerevisiae (Sc) citrate synthase (CS)-like | Back alignment and domain information |
|---|
| >cd06110 BSuCS-II_like Bacillus subtilis (Bs) citrate synthase (CS)-II_like | Back alignment and domain information |
|---|
| >cd06113 citrate_synt_like_1_2 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >cd06118 citrate_synt_like_1 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >COG1042 Acyl-CoA synthetase (NDP forming) [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF00285 Citrate_synt: Citrate synthase; InterPro: IPR002020 Citrate synthase 2 | Back alignment and domain information |
|---|
| >cd06100 CCL_ACL-C Citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL | Back alignment and domain information |
|---|
| >KOG1255|consensus | Back alignment and domain information |
|---|
| >KOG2617|consensus | Back alignment and domain information |
|---|
| >PLN02235 ATP citrate (pro-S)-lyase | Back alignment and domain information |
|---|
| >PRK06091 membrane protein FdrA; Validated | Back alignment and domain information |
|---|
| >PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A | Back alignment and domain information |
|---|
| >COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >PLN00124 succinyl-CoA ligase [GDP-forming] subunit beta; Provisional | Back alignment and domain information |
|---|
| >PRK14046 malate--CoA ligase subunit beta; Provisional | Back alignment and domain information |
|---|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
| >KOG1447|consensus | Back alignment and domain information |
|---|
| >KOG2799|consensus | Back alignment and domain information |
|---|
| >PF08442 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 The ATP-grasp superfamily currently includes 17 groups of enzymes, catalyzing ATP-dependent ligation of a carboxylate containing molecule to an amino or thiol group-containing molecule [] | Back alignment and domain information |
|---|
| >KOG1254|consensus | Back alignment and domain information |
|---|
| >TIGR01016 sucCoAbeta succinyl-CoA synthetase, beta subunit | Back alignment and domain information |
|---|
| >PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional | Back alignment and domain information |
|---|
| >PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6 | Back alignment and domain information |
|---|
| >COG1832 Predicted CoA-binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF02629 CoA_binding: CoA binding domain; InterPro: IPR003781 This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases | Back alignment and domain information |
|---|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
| >PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6 | Back alignment and domain information |
|---|
| >TIGR01016 sucCoAbeta succinyl-CoA synthetase, beta subunit | Back alignment and domain information |
|---|
| >PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional | Back alignment and domain information |
|---|
| >PRK12349 citrate synthase 3; Provisional | Back alignment and domain information |
|---|
| >PRK14046 malate--CoA ligase subunit beta; Provisional | Back alignment and domain information |
|---|
| >cd06118 citrate_synt_like_1 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >PRK14036 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PF13549 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A | Back alignment and domain information |
|---|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
| >PLN00124 succinyl-CoA ligase [GDP-forming] subunit beta; Provisional | Back alignment and domain information |
|---|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
| >COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01800 cit_synth_II 2-methylcitrate synthase/citrate synthase II | Back alignment and domain information |
|---|
| >cd06112 citrate_synt_like_1_1 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >PRK14032 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14037 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06109 BsCS-I_like Bacillus subtilis (Bs) citrate synthase CS-I_like | Back alignment and domain information |
|---|
| >cd06110 BSuCS-II_like Bacillus subtilis (Bs) citrate synthase (CS)-II_like | Back alignment and domain information |
|---|
| >cd06108 Ec2MCS_like Escherichia coli (Ec) 2-methylcitrate synthase (2MCS)_like | Back alignment and domain information |
|---|
| >PRK06091 membrane protein FdrA; Validated | Back alignment and domain information |
|---|
| >PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
| >PRK12351 methylcitrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06111 DsCS_like Cold-active citrate synthase (CS) from an Antarctic bacterial strain DS2-3R (Ds)-like | Back alignment and domain information |
|---|
| >cd06113 citrate_synt_like_1_2 Citrate synthase (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle) | Back alignment and domain information |
|---|
| >cd06115 AthCS_per_like Arabidopsis thaliana (Ath) peroxisomal (Per) CS_like | Back alignment and domain information |
|---|
| >cd06116 CaCS_like Chloroflexus aurantiacus (Ca) citrate synthase (CS)_like | Back alignment and domain information |
|---|
| >PRK14035 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14033 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >cd06117 Ec2MCS_like_1 Subgroup of Escherichia coli (Ec) 2-methylcitrate synthase (2MCS)_like | Back alignment and domain information |
|---|
| >TIGR01798 cit_synth_I citrate synthase I (hexameric type) | Back alignment and domain information |
|---|
| >PRK09569 type I citrate synthase; Reviewed | Back alignment and domain information |
|---|
| >PRK14034 citrate synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02456 citrate synthase | Back alignment and domain information |
|---|
| >cd06105 ScCit1-2_like Saccharomyces cerevisiae (Sc) citrate synthases Cit1-2_like | Back alignment and domain information |
|---|
| >cd06107 EcCS_AthCS-per_like Escherichia coli (Ec) citrate synthase (CS) gltA and Arabidopsis thaliana (Ath) peroxisomal (Per) CS_like | Back alignment and domain information |
|---|
| >cd06103 ScCS-like Saccharomyces cerevisiae (Sc) citrate synthase (CS)-like | Back alignment and domain information |
|---|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
| >COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02235 ATP citrate (pro-S)-lyase | Back alignment and domain information |
|---|
| >PRK05614 gltA type II citrate synthase; Reviewed | Back alignment and domain information |
|---|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
| >cd06114 EcCS_like Escherichia coli (Ec) citrate synthase (CS) GltA_like | Back alignment and domain information |
|---|
| >cd06106 ScCit3_like Saccharomyces cerevisiae (Sc) 2-methylcitrate synthase Cit3-like | Back alignment and domain information |
|---|
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
| >TIGR01793 cit_synth_euk citrate (Si)-synthase, eukaryotic | Back alignment and domain information |
|---|
| >PRK00885 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK13790 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PF00285 Citrate_synt: Citrate synthase; InterPro: IPR002020 Citrate synthase 2 | Back alignment and domain information |
|---|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK13789 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >TIGR02130 dapB_plant dihydrodipicolinate reductase | Back alignment and domain information |
|---|
| >COG2344 AT-rich DNA-binding protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03855 NAD_NadX aspartate dehydrogenase | Back alignment and domain information |
|---|
| >PLN02257 phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
| >TIGR02068 cya_phycin_syn cyanophycin synthetase | Back alignment and domain information |
|---|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
| >TIGR01761 thiaz-red thiazolinyl imide reductase | Back alignment and domain information |
|---|
| >PRK14016 cyanophycin synthetase; Provisional | Back alignment and domain information |
|---|
| >PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK01372 ddl D-alanine--D-alanine ligase; Reviewed | Back alignment and domain information |
|---|
| >cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
| >PRK06395 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK12350 citrate synthase 2; Provisional | Back alignment and domain information |
|---|
| >cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
| >PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
| >PRK11579 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
| >cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 806 | ||||
| 3pff_A | 829 | Truncated Human Atp-Citrate Lyase With Adp And Tart | 1e-174 | ||
| 3mwe_B | 335 | Truncated Human Atp-Citrate Lyase With Tartrate Bou | 1e-140 | ||
| 3mwd_B | 334 | Truncated Human Atp-Citrate Lyase With Citrate Boun | 1e-132 | ||
| 3mwe_A | 425 | Truncated Human Atp-Citrate Lyase With Tartrate Bou | 2e-32 | ||
| 3mwd_A | 425 | Truncated Human Atp-Citrate Lyase With Citrate Boun | 1e-30 | ||
| 2yv2_A | 297 | Crystal Structure Of Succinyl-Coa Synthetase Alpha | 1e-21 | ||
| 2nu8_A | 288 | C123at Mutant Of E. Coli Succinyl-Coa Synthetase Le | 2e-16 | ||
| 2nu7_A | 288 | C123as Mutant Of E. Coli Succinyl-Coa Synthetase Le | 5e-16 | ||
| 2yv1_A | 294 | Crystal Structure Of Succinyl-Coa Synthetase Alpha | 5e-16 | ||
| 2nua_A | 288 | C123av Mutant Of E. Coli Succinyl-Coa Synthetase Le | 8e-16 | ||
| 1jkj_A | 288 | E. Coli Scs Length = 288 | 9e-16 | ||
| 1cqi_A | 286 | Crystal Structure Of The Complex Of Adp And Mg2+ Wi | 3e-15 | ||
| 2nu9_A | 288 | C123at Mutant Of E. Coli Succinyl-Coa Synthetase Or | 1e-13 | ||
| 2nu6_A | 288 | C123aa Mutant Of E. Coli Succinyl-Coa Synthetase Le | 4e-13 | ||
| 2scu_A | 288 | A Detailed Description Of The Structure Of Succinyl | 4e-13 | ||
| 3ufx_A | 296 | Thermus Aquaticus Succinyl-coa Synthetase In Comple | 2e-10 | ||
| 1oi7_A | 288 | The Crystal Structure Of Succinyl-Coa Synthetase Al | 3e-10 | ||
| 2fpg_A | 305 | Crystal Structure Of Pig Gtp-Specific Succinyl-Coa | 9e-08 | ||
| 1euc_A | 311 | Crystal Structure Of Dephosphorylated Pig Heart, Gt | 9e-08 | ||
| 1eud_A | 311 | Crystal Structure Of Phosphorylated Pig Heart, Gtp- | 2e-07 | ||
| 2fp4_A | 305 | Crystal Structure Of Pig Gtp-Specific Succinyl-Coa | 2e-07 | ||
| 2p2w_A | 367 | Crystal Structure Of Citrate Synthase From Thermoto | 3e-05 | ||
| 2ibp_A | 409 | Crystal Structure Of Citrate Synthase From Pyrobacu | 5e-05 | ||
| 1o7x_A | 377 | Citrate Synthase From Sulfolobus Solfataricus Lengt | 1e-04 |
| >pdb|3PFF|A Chain A, Truncated Human Atp-Citrate Lyase With Adp And Tartrate Bound Length = 829 | Back alignment and structure |
|
| >pdb|3MWE|B Chain B, Truncated Human Atp-Citrate Lyase With Tartrate Bound Length = 335 | Back alignment and structure |
| >pdb|3MWD|B Chain B, Truncated Human Atp-Citrate Lyase With Citrate Bound Length = 334 | Back alignment and structure |
| >pdb|3MWE|A Chain A, Truncated Human Atp-Citrate Lyase With Tartrate Bound Length = 425 | Back alignment and structure |
| >pdb|3MWD|A Chain A, Truncated Human Atp-Citrate Lyase With Citrate Bound Length = 425 | Back alignment and structure |
| >pdb|2YV2|A Chain A, Crystal Structure Of Succinyl-Coa Synthetase Alpha Chain From Aeropyrum Pernix K1 Length = 297 | Back alignment and structure |
| >pdb|2NU8|A Chain A, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 | Back alignment and structure |
| >pdb|2NU7|A Chain A, C123as Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 | Back alignment and structure |
| >pdb|2YV1|A Chain A, Crystal Structure Of Succinyl-Coa Synthetase Alpha Chain From Methanocaldococcus Jannaschii Dsm 2661 Length = 294 | Back alignment and structure |
| >pdb|2NUA|A Chain A, C123av Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 | Back alignment and structure |
| >pdb|1JKJ|A Chain A, E. Coli Scs Length = 288 | Back alignment and structure |
| >pdb|1CQI|A Chain A, Crystal Structure Of The Complex Of Adp And Mg2+ With Dephosphorylated E. Coli Succinyl-Coa Synthetase Length = 286 | Back alignment and structure |
| >pdb|2NU9|A Chain A, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form Length = 288 | Back alignment and structure |
| >pdb|2NU6|A Chain A, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 | Back alignment and structure |
| >pdb|2SCU|A Chain A, A Detailed Description Of The Structure Of Succinyl-Coa Synthetase From Escherichia Coli Length = 288 | Back alignment and structure |
| >pdb|3UFX|A Chain A, Thermus Aquaticus Succinyl-coa Synthetase In Complex With Gdp-mn2+ Length = 296 | Back alignment and structure |
| >pdb|1OI7|A Chain A, The Crystal Structure Of Succinyl-Coa Synthetase Alpha Subunit From Thermus Thermophilus Length = 288 | Back alignment and structure |
| >pdb|2FPG|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase In Complex With Gdp Length = 305 | Back alignment and structure |
| >pdb|1EUC|A Chain A, Crystal Structure Of Dephosphorylated Pig Heart, Gtp- Specific Succinyl-Coa Synthetase Length = 311 | Back alignment and structure |
| >pdb|1EUD|A Chain A, Crystal Structure Of Phosphorylated Pig Heart, Gtp-Specific Succinyl-Coa Synthetase Length = 311 | Back alignment and structure |
| >pdb|2FP4|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase In Complex With Gtp Length = 305 | Back alignment and structure |
| >pdb|2P2W|A Chain A, Crystal Structure Of Citrate Synthase From Thermotoga Maritima Msb8 Length = 367 | Back alignment and structure |
| >pdb|2IBP|A Chain A, Crystal Structure Of Citrate Synthase From Pyrobaculum Aerophilum Length = 409 | Back alignment and structure |
| >pdb|1O7X|A Chain A, Citrate Synthase From Sulfolobus Solfataricus Length = 377 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} Length = 829 | Back alignment and structure |
|---|
Score = 614 bits (1586), Expect = 0.0
Identities = 315/493 (63%), Positives = 367/493 (74%), Gaps = 53/493 (10%)
Query: 91 DQVVLITGGGIANFTNVAATFKGIVTALTEFQSKLIEHKISIFVRRAGPNYQEGLRIIRE 150
D +LI GG IANFTNVAATFKGIV A+ ++Q L EH+++IFVRR GPNYQEGLR++ E
Sbjct: 334 DGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGE 393
Query: 151 VGKTLGIPLFVFGPETHMTAIVGMALGKKEIPSETSADGATANFLLPGGQ---------- 200
VGKT GIP+ VFG ETHMTAIVGMALG + IP++ TANFLL
Sbjct: 394 VGKTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRT 453
Query: 201 -----------------------------------------EQTKAIVWGMQTRAVQSML 219
TKAIVWGMQTRAVQ ML
Sbjct: 454 ASFSESRADEVAPAKKAKPAMPQDSVPSPRSLQGKSTTLFSRHTKAIVWGMQTRAVQGML 513
Query: 220 DFDFVCRRSEPSVAAMVYPFTGDHKLKFYWGHKEVLIPVYKKMEDAMSKNKDADVLVNFA 279
DFD+VC R EPSVAAMVYPFTGDHK KFYWGHKE+LIPV+K M DAM K+ + DVL+NFA
Sbjct: 514 DFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDVLINFA 573
Query: 280 SLRSAYDSTIETLGFPQIRSIAIIAEGIPENMTRKLNLLAKEKGVSIIGPATVGGLKPGC 339
SLRSAYDST+ET+ + QIR+IAIIAEGIPE +TRKL A +KGV+IIGPATVGG+KPGC
Sbjct: 574 SLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGC 633
Query: 340 FKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKATNGVYEGVAIGGDRYP 399
FKIGNTGGM+DNIL SKLYRPGSVAYVSRSGGMSNELNNIIS+ T+GVYEGVAIGGDRYP
Sbjct: 634 FKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYP 693
Query: 400 GTTFMDHILRYQADPEVKMIVLLGEVGGVEEYEVCAALKDKRITKPLVAWCIGTCASMFT 459
G+TFMDH+LRYQ P VKMIV+LGE+GG EEY++C +K+ R+TKP+V WCIGTCA+MF+
Sbjct: 694 GSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCIGTCATMFS 753
Query: 460 SEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGDIIGSVYKDLVSRGDIVPQ 519
SEVQFGHAG+CAN +ETAV KN++L +AG VP SFD LG+II SVY+DLV+ G IVP
Sbjct: 754 SEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVANGVIVPA 813
Query: 520 PELPPPTVPMDYS 532
E+P +
Sbjct: 814 QEVPAA--LEHHH 824
|
| >3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} Length = 829 | Back alignment and structure |
|---|
| >3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B* Length = 334 | Back alignment and structure |
|---|
| >3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* Length = 425 | Back alignment and structure |
|---|
| >3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* Length = 425 | Back alignment and structure |
|---|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} Length = 297 | Back alignment and structure |
|---|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 Length = 288 | Back alignment and structure |
|---|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* Length = 288 | Back alignment and structure |
|---|
| >2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* Length = 305 | Back alignment and structure |
|---|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} Length = 294 | Back alignment and structure |
|---|
| >3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli} Length = 480 | Back alignment and structure |
|---|
| >3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} Length = 375 | Back alignment and structure |
|---|
| >2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima} Length = 367 | Back alignment and structure |
|---|
| >1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B Length = 435 | Back alignment and structure |
|---|
| >3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica} Length = 404 | Back alignment and structure |
|---|
| >1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1 Length = 377 | Back alignment and structure |
|---|
| >3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis} Length = 414 | Back alignment and structure |
|---|
| >3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A Length = 426 | Back alignment and structure |
|---|
| >1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1 Length = 378 | Back alignment and structure |
|---|
| >1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii} Length = 378 | Back alignment and structure |
|---|
| >2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A* Length = 385 | Back alignment and structure |
|---|
| >1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A* Length = 377 | Back alignment and structure |
|---|
| >1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1 Length = 371 | Back alignment and structure |
|---|
| >1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii} Length = 373 | Back alignment and structure |
|---|
| >2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis} Length = 363 | Back alignment and structure |
|---|
| >2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti} Length = 436 | Back alignment and structure |
|---|
| >3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis} Length = 427 | Back alignment and structure |
|---|
| >2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum} Length = 409 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 806 | |||
| 3pff_A | 829 | ATP-citrate synthase; phosphohistidine, organic ac | 100.0 | |
| 3mwd_B | 334 | ATP-citrate synthase; ATP-grAsp, phosphohistidine, | 100.0 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 100.0 | |
| 2fp4_A | 305 | Succinyl-COA ligase [GDP-forming] alpha-chain, mit | 100.0 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 100.0 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 100.0 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 100.0 | |
| 2csu_A | 457 | 457AA long hypothetical protein; structural genomi | 100.0 | |
| 3tqg_A | 375 | 2-methylcitrate synthase; energy metabolism, trans | 100.0 | |
| 2c6x_A | 363 | Citrate synthase 1; tricarboxylic acid cycle, tran | 100.0 | |
| 3msu_A | 427 | Citrate synthase; helix bundle, APHA-beta fold, cs | 100.0 | |
| 2p2w_A | 367 | Citrate synthase; transferase, structural genomics | 100.0 | |
| 2h12_A | 436 | Citrate synthase; acidophIle, acetic acid resistan | 100.0 | |
| 1o7x_A | 377 | Citrate synthase; lyase, tricarboxylic acid cycle; | 100.0 | |
| 3hwk_A | 414 | Methylcitrate synthase; niaid, ssgcid, structural | 100.0 | |
| 1vgp_A | 373 | 373AA long hypothetical citrate synthase; open for | 100.0 | |
| 1aj8_A | 371 | Citrate synthase; hyperthermostable, lyase; HET: C | 100.0 | |
| 1iom_A | 377 | Citrate synthase; open form, riken structural geno | 100.0 | |
| 3o8j_A | 404 | 2-methylcitrate synthase; short chain fatty acids, | 100.0 | |
| 2ifc_A | 385 | Citrate synthase; oxaloacetate, EC 2.3.3.1, transf | 100.0 | |
| 1a59_A | 378 | Citrate synthase; cold-activity; HET: COA CIT; 2.0 | 100.0 | |
| 1vgm_A | 378 | 378AA long hypothetical citrate synthase; open for | 100.0 | |
| 3l96_A | 426 | Citrate synthase; quaternary, hexamer, GRAM-negati | 100.0 | |
| 2ibp_A | 409 | Citrate synthase; disulfide bond, homodimer, therm | 100.0 | |
| 1csh_A | 435 | Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A | 100.0 | |
| 3dmy_A | 480 | Protein FDRA; predicted actyl-COA synthetase, nysg | 100.0 | |
| 3mwd_A | 425 | ATP-citrate synthase; ATP-grAsp, phosphohistidine, | 100.0 | |
| 2fp4_B | 395 | Succinyl-COA ligase [GDP-forming] beta-chain, mito | 99.89 | |
| 2nu8_B | 388 | SCS-beta, succinyl-COA synthetase beta chain; citr | 99.89 | |
| 3ff4_A | 122 | Uncharacterized protein; structural genomics, PSI- | 99.79 | |
| 3ufx_B | 397 | Succinyl-COA synthetase beta subunit; ATP-grAsp fo | 99.77 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 99.74 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 99.74 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 99.71 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 99.71 | |
| 3ufx_B | 397 | Succinyl-COA synthetase beta subunit; ATP-grAsp fo | 98.71 | |
| 1wr2_A | 238 | Hypothetical protein PH1789; structural genomics, | 98.37 | |
| 2csu_A | 457 | 457AA long hypothetical protein; structural genomi | 97.66 | |
| 3dmy_A | 480 | Protein FDRA; predicted actyl-COA synthetase, nysg | 97.52 | |
| 2fp4_B | 395 | Succinyl-COA ligase [GDP-forming] beta-chain, mito | 97.31 | |
| 2nu8_B | 388 | SCS-beta, succinyl-COA synthetase beta chain; citr | 97.3 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.0 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.53 | |
| 2h12_A | 436 | Citrate synthase; acidophIle, acetic acid resistan | 96.04 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 95.91 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 95.77 | |
| 3tqg_A | 375 | 2-methylcitrate synthase; energy metabolism, trans | 95.69 | |
| 1o7x_A | 377 | Citrate synthase; lyase, tricarboxylic acid cycle; | 95.57 | |
| 2p2w_A | 367 | Citrate synthase; transferase, structural genomics | 95.55 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.53 | |
| 1vgp_A | 373 | 373AA long hypothetical citrate synthase; open for | 95.51 | |
| 1iom_A | 377 | Citrate synthase; open form, riken structural geno | 95.49 | |
| 1vgm_A | 378 | 378AA long hypothetical citrate synthase; open for | 95.43 | |
| 2ifc_A | 385 | Citrate synthase; oxaloacetate, EC 2.3.3.1, transf | 95.41 | |
| 1a59_A | 378 | Citrate synthase; cold-activity; HET: COA CIT; 2.0 | 95.16 | |
| 3hwk_A | 414 | Methylcitrate synthase; niaid, ssgcid, structural | 94.95 | |
| 3o8j_A | 404 | 2-methylcitrate synthase; short chain fatty acids, | 94.89 | |
| 3l96_A | 426 | Citrate synthase; quaternary, hexamer, GRAM-negati | 94.71 | |
| 2cqy_A | 108 | Propionyl-COA carboxylase alpha chain, mitochondri | 94.68 | |
| 1csh_A | 435 | Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A | 94.66 | |
| 2c6x_A | 363 | Citrate synthase 1; tricarboxylic acid cycle, tran | 94.39 | |
| 1j5p_A | 253 | Aspartate dehydrogenase; TM1643, structural genomi | 94.3 | |
| 1aj8_A | 371 | Citrate synthase; hyperthermostable, lyase; HET: C | 94.01 | |
| 4ew6_A | 330 | D-galactose-1-dehydrogenase protein; nysgrc, PSI-b | 93.91 | |
| 3msu_A | 427 | Citrate synthase; helix bundle, APHA-beta fold, cs | 93.9 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 93.47 | |
| 3mjf_A | 431 | Phosphoribosylamine--glycine ligase; structural ge | 93.46 | |
| 3ln6_A | 750 | Glutathione biosynthesis bifunctional protein GSH; | 93.31 | |
| 4gmf_A | 372 | Yersiniabactin biosynthetic protein YBTU; rossmann | 93.17 | |
| 3evn_A | 329 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 92.79 | |
| 3o9z_A | 312 | Lipopolysaccaride biosynthesis protein WBPB; oxido | 92.47 | |
| 3lp8_A | 442 | Phosphoribosylamine-glycine ligase; ssgcid, NIH, n | 92.41 | |
| 3mwd_A | 425 | ATP-citrate synthase; ATP-grAsp, phosphohistidine, | 92.16 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 91.81 | |
| 2ibp_A | 409 | Citrate synthase; disulfide bond, homodimer, therm | 91.72 | |
| 3c1a_A | 315 | Putative oxidoreductase; ZP_00056571.1, oxidoreduc | 91.62 | |
| 3ln7_A | 757 | Glutathione biosynthesis bifunctional protein GSH; | 91.21 | |
| 3fhl_A | 362 | Putative oxidoreductase; NAD-binding domain, PSI-2 | 91.19 | |
| 1vkz_A | 412 | Phosphoribosylamine--glycine ligase; TM1250, struc | 91.18 | |
| 3moi_A | 387 | Probable dehydrogenase; structural genomics, PSI2, | 91.18 | |
| 2p2s_A | 336 | Putative oxidoreductase; YP_050235.1, structural g | 90.83 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 90.82 | |
| 3oa2_A | 318 | WBPB; oxidoreductase, sugar biosynthesis, dehydrog | 90.73 | |
| 3kux_A | 352 | Putative oxidoreductase; oxidoreductase family, cs | 90.57 | |
| 2g0t_A | 350 | Conserved hypothetical protein; structural genomic | 90.57 | |
| 3f4l_A | 345 | Putative oxidoreductase YHHX; structural genomics, | 90.55 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 90.54 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 90.44 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 90.17 | |
| 3keo_A | 212 | Redox-sensing transcriptional repressor REX; DNA b | 90.05 | |
| 3aw8_A | 369 | PURK, phosphoribosylaminoimidazole carboxylase, AT | 90.04 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 89.84 | |
| 3dty_A | 398 | Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram | 89.8 | |
| 3gdo_A | 358 | Uncharacterized oxidoreductase YVAA; structural ge | 89.65 | |
| 1lc0_A | 294 | Biliverdin reductase A; oxidoreductase, tetrapyrro | 89.63 | |
| 2ip4_A | 417 | PURD, phosphoribosylamine--glycine ligase; GAR syn | 89.37 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 89.35 | |
| 3e82_A | 364 | Putative oxidoreductase; NAD, GFO/IDH/MOCA family, | 89.26 | |
| 3btv_A | 438 | Galactose/lactose metabolism regulatory protein GA | 89.06 | |
| 1tlt_A | 319 | Putative oxidoreductase (virulence factor MVIM HO; | 88.86 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 88.82 | |
| 3mz0_A | 344 | Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; | 88.77 | |
| 3uuw_A | 308 | Putative oxidoreductase with NAD(P)-binding rossm | 88.73 | |
| 3ec7_A | 357 | Putative dehydrogenase; alpha-beta, structural gen | 88.66 | |
| 1zh8_A | 340 | Oxidoreductase; TM0312, structural genomics, JO ce | 88.65 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 88.5 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 88.23 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 88.17 | |
| 1f06_A | 320 | MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH | 88.0 | |
| 3v5n_A | 417 | Oxidoreductase; structural genomics, PSI-biology, | 87.91 | |
| 2xcl_A | 422 | Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- | 87.9 | |
| 2ho3_A | 325 | Oxidoreductase, GFO/IDH/MOCA family; streptococcus | 87.77 | |
| 2yrx_A | 451 | Phosphoribosylglycinamide synthetase; glycinamide | 87.64 | |
| 2yw2_A | 424 | Phosphoribosylamine--glycine ligase; glycinamide r | 87.46 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 87.43 | |
| 2nvw_A | 479 | Galactose/lactose metabolism regulatory protein GA | 87.23 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 87.08 | |
| 3m2t_A | 359 | Probable dehydrogenase; PSI, SGXNY, structural gen | 87.04 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 86.86 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 86.69 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 86.69 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 86.26 | |
| 2qk4_A | 452 | Trifunctional purine biosynthetic protein adenosi; | 86.14 | |
| 3pff_A | 829 | ATP-citrate synthase; phosphohistidine, organic ac | 86.02 | |
| 2dzd_A | 461 | Pyruvate carboxylase; biotin carboxylase, ligase; | 85.44 | |
| 1ulz_A | 451 | Pyruvate carboxylase N-terminal domain; biotin car | 85.4 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 85.08 | |
| 3i23_A | 349 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 85.07 | |
| 2vpq_A | 451 | Acetyl-COA carboxylase; bacteria, ATP-grAsp domain | 84.97 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 84.96 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 84.92 | |
| 2w70_A | 449 | Biotin carboxylase; ligase, ATP-binding, fatty aci | 84.92 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 84.69 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 84.42 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 83.73 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 83.49 | |
| 4eg0_A | 317 | D-alanine--D-alanine ligase; structural genomics, | 83.18 | |
| 2z04_A | 365 | Phosphoribosylaminoimidazole carboxylase ATPase su | 83.01 | |
| 2vt3_A | 215 | REX, redox-sensing transcriptional repressor REX; | 82.82 | |
| 1ehi_A | 377 | LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g | 82.56 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 82.49 | |
| 3e5n_A | 386 | D-alanine-D-alanine ligase A; bacterial blight; 2. | 82.46 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 82.07 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 82.04 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 81.25 | |
| 1w96_A | 554 | ACC, acetyl-coenzyme A carboxylase; ligase, obesit | 80.83 |
| >3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-112 Score=1007.72 Aligned_cols=523 Identities=65% Similarity=1.085 Sum_probs=448.8
Q ss_pred CcccccchhchHHHHHhhCC-CCcccccccccccccCCCHHHHHhccccccCCCeEEccCccccccCccCceeecCCHHH
Q psy16953 1 MSAKAISEATGKDIINRNLD-PNTAAAKCRFAAVKEETSWAELVRNEPWLESSKLVAKPDQLIKRRGKLGLIKVNTDFKG 79 (806)
Q Consensus 1 ms~k~i~Ey~~K~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~VvKpd~l~~~RGK~Glv~l~~~~~e 79 (806)
||+|+|+|||||+||++|+. +++..++.++++++..++|+|++++++||++.++|||||+|+|+|||+|||||++|++|
T Consensus 1 ms~k~i~Ey~aK~ll~~~~~~~~~~~~~~~~~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eE 80 (829)
T 3pff_A 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDG 80 (829)
T ss_dssp -CEEEECHHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHH
T ss_pred CCchhHhHHHHHHHHHHhCccccccccCCceEEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHH
Confidence 99999999999999999999 46666788888899999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHcCCee-------------------------------------------------------------------
Q psy16953 80 AQSWISERMGKDQ------------------------------------------------------------------- 92 (806)
Q Consensus 80 ~~~~~~~~~g~~i------------------------------------------------------------------- 92 (806)
|++|+++++|+.+
T Consensus 81 a~~aa~~iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s~eGGvdIE~vad~~~~~~I~p~~gl 160 (829)
T 3pff_A 81 VKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKL 160 (829)
T ss_dssp HHHHHTTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEESSCSTTCCCHHHHSEEEEEETTCCC
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEECCCCcchhhhhhhceEEecCCcccc
Confidence 9999999998864
Q ss_pred --------------------------------------------------------------------------------
Q psy16953 93 -------------------------------------------------------------------------------- 92 (806)
Q Consensus 93 -------------------------------------------------------------------------------- 92 (806)
T Consensus 161 ~~~~a~~~ll~g~~~~d~~ala~~L~~Ly~lf~d~d~t~lEINPLvvt~dgv~ALDAKi~lDDnA~fR~~~~~~~~~~~~ 240 (829)
T 3pff_A 161 NPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240 (829)
T ss_dssp CHHHHHHTTTTTSCGGGHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTEEEECCCEEEEEGGGHHHHHHHHCSCCCCC
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCccEEEeeceEecCCceEEEeceeeeccchhhhCchhhhhhhccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy16953 93 -------------------------------------------------------------------------------- 92 (806)
Q Consensus 93 -------------------------------------------------------------------------------- 92 (806)
T Consensus 241 ~~~~~~~~~E~~~~e~~ak~~a~~~l~yv~ldG~Ig~mvNGaGlamaTmD~I~~~Gg~~~pANFlDvGGga~~e~v~~~~ 320 (829)
T 3pff_A 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYA 320 (829)
T ss_dssp CSSCCCCHHHHHHHHHHHTSSSEEEEEESCTTCSEEECCBSHHHHHHHHHHHHHTTCTTTBCEEEEEESCCCHHHHHHHH
T ss_pred cccccCChhhhhhhhhhhhhccccCccEEecCCeEEeeccCchHHHHHHHHHHHcCCCCCCceeEEecCCCCHHHHHHHH
Confidence
Q ss_pred ---------------EEEEEeccccchhhhhhhhhHHHHHHHHhhhhhcccCceEEEEEcCCCHHHHHHHHHHhcccCCc
Q psy16953 93 ---------------VVLITGGGIANFTNVAATFKGIVTALTEFQSKLIEHKISIFVRRAGPNYQEGLRIIREVGKTLGI 157 (806)
Q Consensus 93 ---------------~~~~i~GGI~~~~~vA~~~~gii~al~~~~~~~~~~~~~ivvR~~G~n~~eG~~~l~~~g~~~g~ 157 (806)
..+||||||+|||+||+||+|||+|++++.+++.+.++||||||.|||++||+++|+++|++||+
T Consensus 321 ~~~l~ii~~d~~vk~ilvNIfGGI~~cd~VA~tf~GIi~A~k~~~~~~~~~~vPiVVRl~GtN~eeg~~il~~~g~~lgl 400 (829)
T 3pff_A 321 KTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGI 400 (829)
T ss_dssp HHHHHHTTSSCCTTCEEEEECBCBCSSCCHHHHHHHHHHHHHHHHHHHHHTTEEEEEECBSTTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCEEEEEecCCccchHHHHHHHhHHHHHHHHhhhhcccCCceEEEECCCCCHHHHHHHHHhCccccCC
Confidence 78999999999999999999999999998776667899999999999999999999999999999
Q ss_pred cEEEeCCcchHHHHHHHHhcCCCCCCCCCCCCCcccccC-----------------------------------------
Q psy16953 158 PLFVFGPETHMTAIVGMALGKKEIPSETSADGATANFLL----------------------------------------- 196 (806)
Q Consensus 158 ~i~~~~~~~~m~~~~~~a~~~~~~~~~~~~~~~~~~~~~----------------------------------------- 196 (806)
||++||+|||||++|.||++++|+|++++.+.+|+|||+
T Consensus 401 ~i~v~g~e~~mt~iv~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (829)
T 3pff_A 401 PIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQDSVP 480 (829)
T ss_dssp CEEEECTTSCTTHHHHHHHTSSCCC-------------------------------------------------------
T ss_pred cEEEeCCcccHHHHHHHHhcccCCCCCCCccccccceeccCCCCCCCCCCCccccccccccccCCccccccccccccccc
Confidence 999999999999999999999999999999988998865
Q ss_pred ----------CCCCCCceEEEEccChhHHHhhhhcccccccCCCcccceeEeecCCCcccccccceeecccccccHHHHh
Q psy16953 197 ----------PGGQEQTKAIVWGMQTRAVQSMLDFDFVCRRSEPSVAAMVYPFTGDHKLKFYWGHKEVLIPVYKKMEDAM 266 (806)
Q Consensus 197 ----------~~~~~~t~v~V~G~~~r~~~~ll~~gf~~~~~~~~~~g~iypvnp~~~~~~~~g~~~i~~p~y~sv~dai 266 (806)
+.|+++|||+|||+++|.+++|++|||+|+|.++++.|.|+|.+.+++|++|||.+++|+|||+|++|+.
T Consensus 481 ~~~~~~~~~~~l~~~~trviV~G~tg~~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~y~sv~ea~ 560 (829)
T 3pff_A 481 SPRSLQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAM 560 (829)
T ss_dssp ------CCCSCCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHH
T ss_pred ccccccccceeeecCCCeEEEECCcHHHHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCcccCCcHHHHh
Confidence 2278899999999999999999999999999999999988888887789999999999999999999954
Q ss_pred cc--CCCeeEEEeecCChhhHHHHHHHhcC-CCCCEEEEEcCCCCHHHHHHHHHHHHHcCCeEEccCccccccCCccccc
Q psy16953 267 SK--NKDADVLVNFASLRSAYDSTIETLGF-PQIRSIAIIAEGIPENMTRKLNLLAKEKGVSIIGPATVGGLKPGCFKIG 343 (806)
Q Consensus 267 p~--~~Dlavivi~~~~~~~~~~~le~~~~-~gvk~~viis~Gf~E~~~~~l~~~a~~~giriiGPN~~Gii~p~~~~ig 343 (806)
++ .+|++|| ++|+..+++++++|.+ +|||.+||||+||+|.++++|+++|+++|+||+||||+|++||+++++|
T Consensus 561 ~~~p~~DlaVI---~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~rliGPNc~Gii~p~~~~ig 637 (829)
T 3pff_A 561 RKHPEVDVLIN---FASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIG 637 (829)
T ss_dssp HHCTTCCEEEE---CCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCCEEETTTEECT
T ss_pred hccCCCcEEEE---eCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCEEEcCCCcccCcccccccc
Confidence 44 3688877 4566778888999988 9999999999999999999999999999999999999999999988898
Q ss_pred cCCCCcccccccCCCCCCCEEEEeCChhHHHHHHHHHHhcCCceeEEEeecCCCCCCCCHHHHHHHhhcCCCccEEEEEE
Q psy16953 344 NTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKATNGVYEGVAIGGDRYPGTTFMDHILRYQADPEVKMIVLLG 423 (806)
Q Consensus 344 ~~~g~~~~~~~~~~~~~G~ValvSQSG~l~~~l~~~~~~~g~G~s~~vs~Gn~~~~d~~~~D~l~~l~~Dp~Tk~I~ly~ 423 (806)
++.|++.+++|...++||+||+|||||++++++++|+.++|+|||++||+||++++|+++.|+|+||.+||+|++|++|+
T Consensus 638 ~~~g~lna~~~~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~ 717 (829)
T 3pff_A 638 NTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLG 717 (829)
T ss_dssp TTTCSHHHHHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEE
T ss_pred ccccccccccccccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEE
Confidence 87776666667667899999999999999999999999999999999999999889999999999999999999999999
Q ss_pred ccCCcchHHHHHHHHhcCCCCCEEEEEeCcCcCcCcccccccccCCcCCCCcccHHHHHHHHHHcCCcccCChhhHHHHH
Q psy16953 424 EVGGVEEYEVCAALKDKRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGDII 503 (806)
Q Consensus 424 Eigg~~d~~f~~a~r~~~~~KPVV~lk~Grs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~qaGvi~v~~~~EL~~~~ 503 (806)
|+||-++.+.++++++.+++||||+||+|||++.|.+++++|||||++|++..|+.+|+++|||+|+++++|++||++++
T Consensus 718 Ei~g~~f~~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~~ 797 (829)
T 3pff_A 718 EIGGTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEII 797 (829)
T ss_dssp ESSSSHHHHHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHH
T ss_pred ecCchHHHHHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHHH
Confidence 97654333344444433689999999999999822268899999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhCCccccCCCCCCCC
Q psy16953 504 GSVYKDLVSRGDIVPQPELPPPT 526 (806)
Q Consensus 504 ~all~~L~~~g~i~~~~~~P~~~ 526 (806)
+.++++|+.+|+|+|.+|+||..
T Consensus 798 ~~~~~~l~~~~~~~~~~~~~~~~ 820 (829)
T 3pff_A 798 QSVYEDLVANGVIVPAQEVPAAL 820 (829)
T ss_dssp HHHHHHHHHTTSCCC--------
T ss_pred HHHHHHHHHCCcEeeCCCCCchh
Confidence 99999999999999999987753
|
| >3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B* | Back alignment and structure |
|---|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
| >2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* | Back alignment and structure |
|---|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
| >2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1 | Back alignment and structure |
|---|
| >3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0 | Back alignment and structure |
|---|
| >2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis} | Back alignment and structure |
|---|
| >2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima} | Back alignment and structure |
|---|
| >2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti} | Back alignment and structure |
|---|
| >1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1 | Back alignment and structure |
|---|
| >3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1 | Back alignment and structure |
|---|
| >1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A* | Back alignment and structure |
|---|
| >3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica} | Back alignment and structure |
|---|
| >2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A* | Back alignment and structure |
|---|
| >1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1 | Back alignment and structure |
|---|
| >1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A | Back alignment and structure |
|---|
| >2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
| >1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B | Back alignment and structure |
|---|
| >3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli} | Back alignment and structure |
|---|
| >3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* | Back alignment and structure |
|---|
| >2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B* | Back alignment and structure |
|---|
| >2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B* | Back alignment and structure |
|---|
| >3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus} | Back alignment and structure |
|---|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
| >3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus} | Back alignment and structure |
|---|
| >1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1 | Back alignment and structure |
|---|
| >3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli} | Back alignment and structure |
|---|
| >2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B* | Back alignment and structure |
|---|
| >2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B* | Back alignment and structure |
|---|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti} | Back alignment and structure |
|---|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0 | Back alignment and structure |
|---|
| >1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1 | Back alignment and structure |
|---|
| >2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
| >1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A* | Back alignment and structure |
|---|
| >1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A* | Back alignment and structure |
|---|
| >1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1 | Back alignment and structure |
|---|
| >3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica} | Back alignment and structure |
|---|
| >3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A | Back alignment and structure |
|---|
| >2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B | Back alignment and structure |
|---|
| >2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A* | Back alignment and structure |
|---|
| >1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1 | Back alignment and structure |
|---|
| >4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli} | Back alignment and structure |
|---|
| >3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis} | Back alignment and structure |
|---|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A | Back alignment and structure |
|---|
| >3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
| >4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A* | Back alignment and structure |
|---|
| >3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
| >3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* | Back alignment and structure |
|---|
| >3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
| >3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* | Back alignment and structure |
|---|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
| >2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
| >3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum} | Back alignment and structure |
|---|
| >3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} | Back alignment and structure |
|---|
| >3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
| >3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
| >2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
| >3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis} | Back alignment and structure |
|---|
| >2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10 | Back alignment and structure |
|---|
| >3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} | Back alignment and structure |
|---|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A* | Back alignment and structure |
|---|
| >3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
| >3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A | Back alignment and structure |
|---|
| >1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A* | Back alignment and structure |
|---|
| >2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A | Back alignment and structure |
|---|
| >1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* | Back alignment and structure |
|---|
| >3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} | Back alignment and structure |
|---|
| >3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium} | Back alignment and structure |
|---|
| >1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
| >1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A* | Back alignment and structure |
|---|
| >3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* | Back alignment and structure |
|---|
| >2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A | Back alignment and structure |
|---|
| >2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A | Back alignment and structure |
|---|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
| >2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A | Back alignment and structure |
|---|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
| >3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum} | Back alignment and structure |
|---|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
| >2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
| >3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} | Back alignment and structure |
|---|
| >1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
| >3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A | Back alignment and structure |
|---|
| >2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... | Back alignment and structure |
|---|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
| >4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A | Back alignment and structure |
|---|
| >2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A* | Back alignment and structure |
|---|
| >1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 | Back alignment and structure |
|---|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* | Back alignment and structure |
|---|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
| >1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 806 | ||||
| d1euca2 | 176 | c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alph | 7e-25 | |
| d1ioma_ | 374 | a.103.1.1 (A:) Citrate synthase {Thermus thermophi | 2e-23 | |
| d1o7xa_ | 367 | a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolob | 1e-22 | |
| d2nu7a2 | 166 | c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alph | 1e-21 | |
| d1csha_ | 435 | a.103.1.1 (A:) Citrate synthase {Chicken (Gallus g | 4e-21 | |
| d2csua2 | 161 | c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chai | 1e-20 | |
| d1oi7a2 | 167 | c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alph | 7e-19 | |
| d1k3pa_ | 426 | a.103.1.1 (A:) Citrate synthase {Escherichia coli | 6e-18 | |
| d1aj8a_ | 371 | a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococc | 8e-18 | |
| d1a59a_ | 377 | a.103.1.1 (A:) Citrate synthase {Antarctic bacteri | 6e-16 | |
| d2nu7a1 | 119 | c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-c | 1e-04 | |
| d1euca1 | 130 | c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-c | 2e-04 | |
| d2nu7b1 | 150 | c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta | 2e-04 | |
| d1oi7a1 | 121 | c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-c | 8e-04 |
| >d1euca2 c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Succinyl-CoA synthetase, alpha-chain, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 99 bits (248), Expect = 7e-25
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 8/176 (4%)
Query: 333 GGLKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKATNGVYEGVA 392
G + PG KIG I+ +++ G + VSRSG ++ E + ++ G V
Sbjct: 4 GVINPGECKIG--------IMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVG 55
Query: 393 IGGDRYPGTTFMDHILRYQADPEVKMIVLLGEVGGVEEYEVCAALKDKRITKPLVAWCIG 452
IGGD + GT F D + + DP + I+L+GE+GG E LK
Sbjct: 56 IGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSF 115
Query: 453 TCASMFTSEVQFGHAGSCANSDAETAVVKNKSLAQAGAHVPSSFDTLGDIIGSVYK 508
+ GHAG+ A K +L AG V S LG I ++
Sbjct: 116 IAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFE 171
|
| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} Length = 374 | Back information, alignment and structure |
|---|
| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 367 | Back information, alignment and structure |
|---|
| >d2nu7a2 c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 166 | Back information, alignment and structure |
|---|
| >d1csha_ a.103.1.1 (A:) Citrate synthase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 435 | Back information, alignment and structure |
|---|
| >d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} Length = 161 | Back information, alignment and structure |
|---|
| >d1oi7a2 c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 167 | Back information, alignment and structure |
|---|
| >d1k3pa_ a.103.1.1 (A:) Citrate synthase {Escherichia coli [TaxId: 562]} Length = 426 | Back information, alignment and structure |
|---|
| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 371 | Back information, alignment and structure |
|---|
| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} Length = 377 | Back information, alignment and structure |
|---|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} Length = 119 | Back information, alignment and structure |
|---|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 130 | Back information, alignment and structure |
|---|
| >d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 150 | Back information, alignment and structure |
|---|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} Length = 121 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 806 | |||
| d1csha_ | 435 | Citrate synthase {Chicken (Gallus gallus) [TaxId: | 100.0 | |
| d1o7xa_ | 367 | Citrate synthase {Archaeon Sulfolobus solfataricus | 100.0 | |
| d1ioma_ | 374 | Citrate synthase {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d1a59a_ | 377 | Citrate synthase {Antarctic bacterium DS2-3R [TaxI | 100.0 | |
| d1k3pa_ | 426 | Citrate synthase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1aj8a_ | 371 | Citrate synthase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d2csua2 | 161 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 100.0 | |
| d1oi7a2 | 167 | Succinyl-CoA synthetase, alpha-chain, C-terminal d | 100.0 | |
| d2nu7a2 | 166 | Succinyl-CoA synthetase, alpha-chain, C-terminal d | 100.0 | |
| d1euca2 | 176 | Succinyl-CoA synthetase, alpha-chain, C-terminal d | 100.0 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 99.88 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 99.79 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 99.69 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 99.68 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 99.68 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 99.67 | |
| d2nu7b1 | 150 | Succinyl-CoA synthetase, beta-chain, C-terminal do | 99.63 | |
| d1eucb1 | 148 | Succinyl-CoA synthetase, beta-chain, C-terminal do | 99.62 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 99.58 | |
| d2nu7b2 | 238 | Succinyl-CoA synthetase, beta-chain, N-terminal do | 99.46 | |
| d1eucb2 | 246 | Succinyl-CoA synthetase, beta-chain, N-terminal do | 99.3 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 97.81 | |
| d1eucb1 | 148 | Succinyl-CoA synthetase, beta-chain, C-terminal do | 97.62 | |
| d2nu7b1 | 150 | Succinyl-CoA synthetase, beta-chain, C-terminal do | 97.39 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.34 | |
| d1gsoa3 | 224 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 95.56 | |
| d1vkza3 | 220 | Glycinamide ribonucleotide synthetase (GAR-syn), d | 94.65 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.63 | |
| d1csha_ | 435 | Citrate synthase {Chicken (Gallus gallus) [TaxId: | 93.99 | |
| d1o7xa_ | 367 | Citrate synthase {Archaeon Sulfolobus solfataricus | 93.74 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 93.56 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.53 | |
| d1k3pa_ | 426 | Citrate synthase {Escherichia coli [TaxId: 562]} | 93.22 | |
| d1ioma_ | 374 | Citrate synthase {Thermus thermophilus [TaxId: 274 | 93.04 | |
| d1ulza3 | 214 | Biotin carboxylase (BC), domain 2 {Aquifex aeolicu | 92.94 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 92.21 | |
| d1a59a_ | 377 | Citrate synthase {Antarctic bacterium DS2-3R [TaxI | 92.16 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 91.49 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 91.03 | |
| d1aj8a_ | 371 | Citrate synthase {Archaeon Pyrococcus furiosus [Ta | 90.48 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 90.08 | |
| d1a9xa5 | 275 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.27 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 88.0 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 86.69 | |
| d1iowa2 | 210 | D-ala-D-ala ligase, C-domain {Escherichia coli, ge | 86.64 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 85.98 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 84.6 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 84.57 | |
| d2j9ga3 | 216 | Biotin carboxylase (BC), domain 2 {Escherichia col | 84.02 | |
| d1a9xa6 | 259 | Carbamoyl phosphate synthetase (CPS), large subuni | 83.07 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 81.77 | |
| d1ehia2 | 228 | D-alanine:D-lactate ligase VanA, C-domain {Leucono | 80.61 |
| >d1csha_ a.103.1.1 (A:) Citrate synthase {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=5.5e-51 Score=456.51 Aligned_cols=266 Identities=20% Similarity=0.255 Sum_probs=217.0
Q ss_pred HHHHHHhhhhCCccccCCCCCCCCCcccchH--------------Hhhcccccccccceeccccccc------------c
Q psy16953 503 IGSVYKDLVSRGDIVPQPELPPPTVPMDYSW--------------ARELGLIRKPASFMTSICDERG------------Q 556 (806)
Q Consensus 503 ~~all~~L~~~g~i~~~~~~P~~~~PMd~~~--------------a~~~g~~r~~~~~~t~i~d~~~------------~ 556 (806)
+..+++.+ |+++|||++.. ++..| +.+..+|...+.+... .
T Consensus 122 v~~~i~~~------------P~~~hPM~~L~~~vsaL~~~~~~~~~~~~~-~~~~~~~e~~~~~a~~LiAk~P~i~A~~y 188 (435)
T d1csha_ 122 VVTMLDNF------------PTNLHPMSQLSAAITALNSESNFARAYAEG-INRTKYWEFVYEDAMDLIAKLPCVAAKIY 188 (435)
T ss_dssp HHHHHHHS------------CTTSCHHHHHHHHHHHGGGGCHHHHHHHTT-CCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhh------------cCCccHHHHHHHHHHHhhccCccchhhccc-ccccccHHHHHHHHHHHHHhhhHHHHHHH
Confidence 44667777 99999999522 23334 3444555554444311 0
Q ss_pred cccc-CCCCccccccCCCCHHHHHHHHHhcCCCChHHHHHHHHHhhhccCCC-CCCcccceeeeeeccCCChHHHHHHhh
Q psy16953 557 ELLY-AGMPISDVLKQNMGIGGVLSLLWFQRQLPPYVCKFLEMSLMVTADHG-PAVSGAHNTIVCARAGKDLVSSLVSGL 634 (806)
Q Consensus 557 ~i~~-~G~~i~~~i~~~~s~~~~~~~ll~g~~~~~~~~~~l~~~Lvl~ADHg-~~~St~~aarv~aSa~adl~~avaagl 634 (806)
+..+ .|.++. ..++++||++||++|+++ +++...++||++||+||||| .|+|| |++|+++||++|+|+|++||+
T Consensus 189 r~~~~~g~~~~-~pd~~ls~a~nfl~ml~~--~~p~~~~~l~~~lil~aDHeg~n~St-~a~rvvaSt~sd~~sav~agi 264 (435)
T d1csha_ 189 RNLYRAGSSIG-AIDSKLDWSHNFTNMLGY--TDPQFTELMRLYLTIHSDHEGGNVSA-HTSHLVGSALSDPYLSFAAAM 264 (435)
T ss_dssp HHHHSTTCCCC-CCCTTSCHHHHHHHHHTC--CCHHHHHHHHHHHHHTSCCCSCSHHH-HHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHhcCCCCCC-CCCCCcCHHHHHHHHhcC--ccHHHHHHHHHHHHHHhhccCCcchH-HHHHHHhccccchHHHHHHHH
Confidence 1112 244443 235679999999999876 46678999999999999996 88899 999999999999999999999
Q ss_pred ccc-ccccCChHHHHHHHHHHHhc------CCCCHHHHHHHHHhcCCcccccCCCCCCCCCCChHHHHHHHHHHHhCCCC
Q psy16953 635 LTI-GDRFGGALNDAAIQFSAAYD------AGLIPMEFVNEMRKKGKLIMGIGHRVKSINNPDMRVKIIKEFVLQNFPTT 707 (806)
Q Consensus 635 ~al-G~~hGGA~~~a~~~l~e~~~------~~~~~~~~v~~~~~~~~~ipGfGH~vy~~~~~DPRa~~L~~~~~~~~~~~ 707 (806)
+++ ||+||||+++|++||+++.+ +.+++++|+++.+++|++|||||||||+ +.|||+++|+++++++...+
T Consensus 265 ~al~GplHGGA~~~v~~~l~~i~~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGH~vyk--~~DPRa~~l~~~~~~~~~~~ 342 (435)
T d1csha_ 265 NGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLR--KTDPRYTCQREFALKHLPSD 342 (435)
T ss_dssp HHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSCC--SCCHHHHHHHHHHHHHCTTC
T ss_pred HHhccccccchHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhccCCcccccCccccc--CCCcchHHHHHHHHHHcccC
Confidence 999 99999999999999999852 3456788999999999999999999997 46999999999999999999
Q ss_pred hHHHHHHHHHHHHhc------CCCCccCcHhHHHHHHHHHhhhhcCCCChHHHHhhhhccccceehhhhhhhhhHHhHHH
Q psy16953 708 PLLNYALEVEKITTS------KKPNLILNVDGVIAVAFVDLLRHSGSFTREEAQEYVEMGAINGLFVLGRSIGFIGHYMD 781 (806)
Q Consensus 708 ~~~~~a~~ve~~~~~------~~~~l~pNvD~~~a~~~~~Lg~~~glft~ee~~~~i~~~~~~~lF~l~R~~G~iAH~~E 781 (806)
|+++++.++++++.+ +.++++||||||+|++|++||+|. .+++++||++||++||+||++|
T Consensus 343 ~~~~~~~~l~~~~~~~~~e~~~~k~l~pNVD~~sg~~~~~lG~p~-------------~~~~t~lFa~sR~~Gw~AH~~E 409 (435)
T d1csha_ 343 PMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTE-------------MNYYTVLFGVSRALGVLAQLIW 409 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCC-------------GGGHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHcCCCc-------------hhhHHHHHHHHHHHHHHHHHHH
Confidence 999999988877632 457899999999999999998431 3567899999999999999999
Q ss_pred HhhcCCCcccCCCCcceecCCC
Q psy16953 782 QKRLKQGLYRHPWDDISYVLPE 803 (806)
Q Consensus 782 q~~~~~~i~Rp~~~~i~Y~gp~ 803 (806)
|+..+.+|+||+. .|+||.
T Consensus 410 q~~~~~~i~RP~~---~Y~g~~ 428 (435)
T d1csha_ 410 SRALGFPLERPKS---MSTAGL 428 (435)
T ss_dssp HHHTTCCCCCCCC---CCHHHH
T ss_pred HHhcCCCccCCCc---cCCChh
Confidence 9988889999985 599874
|
| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} | Back information, alignment and structure |
|---|
| >d1k3pa_ a.103.1.1 (A:) Citrate synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1oi7a2 c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2nu7a2 c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1euca2 c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1csha_ a.103.1.1 (A:) Citrate synthase {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
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| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
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| >d1k3pa_ a.103.1.1 (A:) Citrate synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} | Back information, alignment and structure |
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| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
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| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
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| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} | Back information, alignment and structure |
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| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
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| >d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} | Back information, alignment and structure |
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