Psyllid ID: psy16990

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFQGGPHPSKAQVRYP
Secondary Structure (PSIPRED)
cEEEcccccHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEcccccccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccccEEEEEccccccccEEEEcccccEEEEEEcccccccEEEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHHHHcHHHHHHHcccEEEEccccccHHHHHHHHHHHccccccccEEEEEEccccEEEccHHccccccccccccccccccccHccccccEEEEEcccccccccEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccEEEcc
Coil and Loop (DISEMBL)
yvrlsydtrpeNILQLFTREWSLELPKLLITVqggkanfelQPKLKKVLRKGLLKAAKTTgawvftggtntgvtRQVGDALLMERSQRSGRVVsigiapwgivennhelivcrpeqparlfpigennhelighnkdvpyhsissprskfavlNNRHAYFLLVdngtagkygAEIILRRKLEKYIsnqklhpgkskivgakggengeplVFASTNEIwtaslhtspsntdaygtiefqggphpskaqvryp
Flexible Loop (DISEMBL)
yvrlsydtrpeniLQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAkttgawvftggtntgvtRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLlvdngtagkYGAEIILRRKLEKyisnqklhpgkskivgakggENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFqggphpskaqvryp
Low Complexity Region (SEG)
YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPklkkvlrkgllkaakTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFQGGPHPSKAQVRYP
Disordered region (IsUnstruct)
**********ENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKL*****************PLVFASTNEIWTASL*****************************
Disordered Region (DISOPRED)
YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDA**********RVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSI*SPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISN*********IVGAKGGENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFQGGPHPS****R**
Disordered Region (DISEMBL)
YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFQGGP**********
Disordered Region (DISPRO)
YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFQGGPHPSKAQVRYP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVGAKGGENGEPLVFASTNEIWTASLHTSPSNTDAYGTIEFQGGPHPSKAQVRYP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
A8DYE2	2023	Transient receptor potent	yes	N/A	0.68	0.084	0.748	8e-79
Q9HCF6	1732	Transient receptor potent	yes	N/A	0.676	0.097	0.557	4e-55
Q7Z4N2	1603	Transient receptor potent	no	N/A	0.676	0.105	0.536	6e-53
Q2TV84	1622	Transient receptor potent	no	N/A	0.676	0.104	0.526	3e-52
Q96QT4	1865	Transient receptor potent	no	N/A	0.676	0.090	0.515	3e-52
Q925B3	1862	Transient receptor potent	no	N/A	0.676	0.090	0.515	4e-52
Q923J1	1863	Transient receptor potent	no	N/A	0.676	0.090	0.515	4e-52
Q2WEA5	1628	Transient receptor potent	no	N/A	0.676	0.103	0.521	5e-52
Q93971	2032	Transient receptor potent	yes	N/A	0.696	0.085	0.477	4e-47
Q9BX84	2022	Transient receptor potent	no	N/A	0.676	0.083	0.436	5e-43

>sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channel trpm OS=Drosophila melanogaster GN=trpm PE=1 SV=1

 Score =  293 bits (750), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 143/191 (74%), Positives = 159/191 (83%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKTT
Sbjct: 194 YVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTT 253

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIV                 
Sbjct: 254 GAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIV----------------- 296

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN++VP HSISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKL
Sbjct: 297 ----ERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKL 352

Query: 181 EKYISNQKLHP 191
           EK+ISN KLHP
Sbjct: 353 EKFISNLKLHP 363

Calcium channel mediating constitutive calcium ion entry.
Drosophila melanogaster (taxid: 7227)

>sp|Q9HCF6|TRPM3_HUMAN Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 106/190 (55%), Positives = 134/190 (70%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVR+S+DT+P+ +L L T+EW LELPKLLI+V GG  NFELQPKLK+V  KGL+KAA TT
Sbjct: 155 YVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTT 214

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGG NTGV R VGDAL    S+  G++ +IGIAPWGIV                 
Sbjct: 215 GAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIV----------------- 257

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN  +LIG +   PY ++S+P SK  VLN+ H++F+L DNGT GKYGAE+ LRR+L
Sbjct: 258 ----ENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQL 313

Query: 181 EKYISNQKLH 190
           EK+IS QK++
Sbjct: 314 EKHISLQKIN 323

Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation.

Homo sapiens (taxid: 9606)

>sp|Q7Z4N2|TRPM1_HUMAN Transient receptor potential cation channel subfamily M member 1 OS=Homo sapiens GN=TRPM1 PE=1 SV=2

 Score =  207 bits (527), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 102/190 (53%), Positives = 131/190 (68%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QPKLK+V  KGL+KAA TT
Sbjct: 72  YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 131

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIV                 
Sbjct: 132 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIV----------------- 174

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN  +L+G +    Y ++S+P SK +VLNN H +F+L DNGT GKYGAE+ LRR L
Sbjct: 175 ----ENKEDLVGKDVTRVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRLL 230

Query: 181 EKYISNQKLH 190
           EK+IS QK++
Sbjct: 231 EKHISLQKIN 240

Cation channel essential for the depolarizing photoresponse of retinal ON bipolar cells. It is part of the GRM6 signaling cascade. May play a role in metastasis suppression (By similarity). May act as a spontaneously active, calcium-permeable plasma membrane channel.

Homo sapiens (taxid: 9606)

>sp|Q2TV84|TRPM1_MOUSE Transient receptor potential cation channel subfamily M member 1 OS=Mus musculus GN=Trpm1 PE=2 SV=2

 Score =  205 bits (521), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 100/190 (52%), Positives = 132/190 (69%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  +FE+QPKLK+V  KGL+KAA TT
Sbjct: 118 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQSFEMQPKLKQVFGKGLIKAAMTT 177

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGG +TGV   VGDAL    S+  GR+ +IGIAPWG+V                 
Sbjct: 178 GAWIFTGGVSTGVVSHVGDALKDHSSKSRGRLCAIGIAPWGMV----------------- 220

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN  +LIG +    Y ++S+P SK +VLNN H +F+L DNGT GKYGAE+ LRR+L
Sbjct: 221 ----ENKEDLIGKDVTRVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQL 276

Query: 181 EKYISNQKLH 190
           EK+IS QK++
Sbjct: 277 EKHISLQKIN 286

Cation channel essential for the depolarizing photoresponse of retinal ON bipolar cells. It is part of the GRM6 signaling cascade. Calcium channel which may play a role in metastasis suppression. May act as a spontaneously active, calcium-permeable plasma membrane channel.

Mus musculus (taxid: 10090)

>sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1

 Score =  204 bits (520), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLSYDT+PE ILQL  +EW +ELPKL+I+V GG   FEL P++K++L KGL+KAA TT
Sbjct: 108 YVRLSYDTKPEVILQLLLKEWQMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVTT 167

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+ TGG NTGV + VGDAL    S+ S ++ +IGIAPWG++                 
Sbjct: 168 GAWILTGGVNTGVAKHVGDALKEHASRSSRKICTIGIAPWGVI----------------- 210

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN ++L+G +   PY ++ +P SK  VLNN H++F+LVD+GT GKYGAE+ LRR+L
Sbjct: 211 ----ENRNDLVGRDVVAPYQTLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVRLRREL 266

Query: 181 EKYISNQKLH 190
           EK I+ Q++H
Sbjct: 267 EKTINQQRIH 276

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q925B3|TRPM7_RAT Transient receptor potential cation channel subfamily M member 7 OS=Rattus norvegicus GN=Trpm7 PE=1 SV=2

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLSYDT+PE ILQL  +EW +ELPKL+I+V GG   FEL P++K++L KGL+KAA TT
Sbjct: 108 YVRLSYDTKPEIILQLLLKEWQMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVTT 167

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+ TGG NTGV + VGDAL    S+ S ++ +IGIAPWG++                 
Sbjct: 168 GAWILTGGVNTGVAKHVGDALKEHASRSSRKICTIGIAPWGVI----------------- 210

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN ++L+G +   PY ++ +P SK  VLNN H++F+LVD+GT GKYGAE+ LRR+L
Sbjct: 211 ----ENRNDLVGRDVVAPYQTLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVRLRREL 266

Query: 181 EKYISNQKLH 190
           EK I+ Q++H
Sbjct: 267 EKTINQQRIH 276

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q923J1|TRPM7_MOUSE Transient receptor potential cation channel subfamily M member 7 OS=Mus musculus GN=Trpm7 PE=1 SV=1

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLSYDT+PE ILQL  +EW +ELPKL+I+V GG   FEL P++K++L KGL+KAA TT
Sbjct: 108 YVRLSYDTKPEIILQLLLKEWQMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVTT 167

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+ TGG NTGV + VGDAL    S+ S ++ +IGIAPWG++                 
Sbjct: 168 GAWILTGGVNTGVAKHVGDALKEHASRSSRKICTIGIAPWGVI----------------- 210

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN ++L+G +   PY ++ +P SK  VLNN H++F+LVD+GT GKYGAE+ LRR+L
Sbjct: 211 ----ENRNDLVGRDVVAPYQTLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVRLRREL 266

Query: 181 EKYISNQKLH 190
           EK I+ Q++H
Sbjct: 267 EKTINQQRIH 276

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2WEA5|TRPM1_RAT Transient receptor potential cation channel subfamily M member 1 OS=Rattus norvegicus GN=Trpm1 PE=2 SV=1

 Score =  204 bits (519), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 99/190 (52%), Positives = 132/190 (69%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  +FE+QPKLK+V  KGL+KAA TT
Sbjct: 118 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQSFEMQPKLKQVFGKGLIKAAMTT 177

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGG +TGV   VGDAL    S+  GR+ +IGIAPWG+V                 
Sbjct: 178 GAWIFTGGVSTGVVSHVGDALKDHSSKSRGRLCAIGIAPWGMV----------------- 220

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN  +L+G +    Y ++S+P SK +VLNN H +F+L DNGT GKYGAE+ LRR+L
Sbjct: 221 ----ENKEDLVGKDVTRVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQL 276

Query: 181 EKYISNQKLH 190
           EK+IS QK++
Sbjct: 277 EKHISLQKIN 286

Calcium channel which may play a role in metastasis suppression. May act as a spontaneously active, calcium-permeable plasma membrane channel.

Rattus norvegicus (taxid: 10116)

>sp|Q93971|TRPG_CAEEL Transient receptor potential channel OS=Caenorhabditis elegans GN=gon-2 PE=1 SV=4

 Score =  188 bits (477), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 94/197 (47%), Positives = 126/197 (63%), Gaps = 23/197 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVR+++DT P  I+ LF   W +  P+L+ITV GG +NF+LQPKL +V RKGLLKAA TT
Sbjct: 394 YVRVNFDTEPAYIMSLFEHVWQISPPRLIITVHGGTSNFDLQPKLARVFRKGLLKAASTT 453

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+ T G +TGV + V  AL   +S +  ++V IGIAPWG++                 
Sbjct: 454 GAWIITSGCDTGVVKHVAAALEGAQSAQRNKIVCIGIAPWGLL----------------- 496

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               +   + IG +K VPY+  SS + +F  LNNRH+YFLLVDNGT G+YGAE+ILR++L
Sbjct: 497 ----KKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGRYGAEVILRKRL 551

Query: 181 EKYISN-QKLHPGKSKI 196
           E YIS  QK+  G   +
Sbjct: 552 EMYISQKQKIFGGTRSV 568

Required for initiation and continuation of postembryonic mitotic cell divisions of gonadal cells Z1 and Z4. Zygotic expression is necessary for hermaphrodite fertility. May be a cation channel.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9BX84|TRPM6_HUMAN Transient receptor potential cation channel subfamily M member 6 OS=Homo sapiens GN=TRPM6 PE=1 SV=2

 Score =  174 bits (441), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/190 (43%), Positives = 120/190 (63%), Gaps = 21/190 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           Y+R SYDT+ +++L L  +EW +ELPKL+I+V GG  NF +  K K++  +GL+KAA+TT
Sbjct: 111 YIRTSYDTKLDHLLHLMLKEWKMELPKLVISVHGGIQNFTMPSKFKEIFSQGLVKAAETT 170

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+ T G NTGV++ VGDAL    S    ++ ++GI PWG++                 
Sbjct: 171 GAWIITEGINTGVSKHVGDALKSHSSHSLRKIWTVGIPPWGVI----------------- 213

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               EN  +LIG +    Y ++ +P SK   LN+ H++F+L D+GT GKYG E+ LRR L
Sbjct: 214 ----ENQRDLIGKDVVCLYQTLDNPLSKLTTLNSMHSHFILSDDGTVGKYGNEMKLRRNL 269

Query: 181 EKYISNQKLH 190
           EKY+S QK+H
Sbjct: 270 EKYLSLQKIH 279

Essential ion channel and serine/threonine-protein kinase. Crucial for magnesium homeostasis. Has an important role in epithelial magnesium transport and in the active magnesium absorption in the gut and kidney. Isoforms of the type M6-kinase lack the ion channel region.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
158286782	1908	AGAP006825-PA [Anopheles gambiae str. PE	0.68	0.089	0.795	6e-82
312381378	875	hypothetical protein AND_06336 [Anophele	0.74	0.211	0.739	3e-80
328713852	1532	PREDICTED: transient receptor potential	0.68	0.110	0.781	3e-79
170058433	243	conserved hypothetical protein [Culex qu	0.68	0.699	0.780	4e-79
328713847	1089	PREDICTED: transient receptor potential	0.68	0.156	0.781	5e-79
161077096	2023	trpm, isoform E [Drosophila melanogaster	0.68	0.084	0.748	5e-77
221330283	1928	trpm, isoform G [Drosophila melanogaster	0.68	0.088	0.748	6e-77
221330281	1942	trpm, isoform F [Drosophila melanogaster	0.68	0.087	0.748	7e-77
116007702	1921	trpm, isoform D [Drosophila melanogaster	0.68	0.088	0.748	7e-77
189239436	1605	PREDICTED: similar to AGAP006825-PA [Tri	0.68	0.105	0.712	2e-76

>gi|158286782|ref|XP_308919.3| AGAP006825-PA [Anopheles gambiae str. PEST] gi|157020632|gb|EAA04234.4| AGAP006825-PA [Anopheles gambiae str. PEST]

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 152/191 (79%), Positives = 162/191 (84%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLSYDTRPE ++QLFTREW+LELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT
Sbjct: 94  YVRLSYDTRPELLVQLFTREWNLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 153

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QRSGRVVSIGIAPWGIV                 
Sbjct: 154 GAWIFTGGTNTGVTKQVGDALLLEGQQRSGRVVSIGIAPWGIV----------------- 196

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN+DVP HSISSPRSK AVLNNRHAYFLLVDNGT G+YGAE+ILRRKL
Sbjct: 197 ----ERNHELLGHNRDVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQGRYGAELILRRKL 252

Query: 181 EKYISNQKLHP 191
           EKYISNQKL P
Sbjct: 253 EKYISNQKLQP 263

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312381378|gb|EFR27137.1| hypothetical protein AND_06336 [Anopheles darlingi]

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/207 (73%), Positives = 166/207 (80%), Gaps = 22/207 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLSYDTRPE ++QLFTREW+LELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT
Sbjct: 130 YVRLSYDTRPELLVQLFTREWNLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 189

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QRSGRVVSIGIAPWGIV                 
Sbjct: 190 GAWIFTGGTNTGVTKQVGDALLLEGQQRSGRVVSIGIAPWGIV----------------- 232

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN+DVP HSISSPRSK AVLNNRHAYFLLVD+G+  +YGAE+ILRRKL
Sbjct: 233 ----ERNHELLGHNRDVPCHSISSPRSKLAVLNNRHAYFLLVDDGSQARYGAELILRRKL 288

Query: 181 EKYISNQKLHPGKSKIVGAKGGENGEP 207
           EKYISNQKL P      G    +NG P
Sbjct: 289 EKYISNQKLQPSTGN-SGRVDDDNGSP 314

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713852|ref|XP_003245193.1| PREDICTED: transient receptor potential cation channel CG34123-like [Acyrthosiphon pisum]

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/192 (78%), Positives = 160/192 (83%), Gaps = 22/192 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE IL LF REW LELPKLLIT+QGGKANFE+QPKLKKVLRKGLLKAAKTT
Sbjct: 97  YVRLSHDTRPETILHLFNREWGLELPKLLITIQGGKANFEIQPKLKKVLRKGLLKAAKTT 156

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAWVFTGGTNTGVTRQVGDALL++ SQR GRVVSIGIAPWGI+EN               
Sbjct: 157 GAWVFTGGTNTGVTRQVGDALLLD-SQRPGRVVSIGIAPWGIIEN--------------- 200

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
                 NHELIGHNKDVPYHSISSPRSK AVLNNRH YFLLVD+GT+G+YGAEI LR+KL
Sbjct: 201 ------NHELIGHNKDVPYHSISSPRSKLAVLNNRHTYFLLVDDGTSGRYGAEIELRKKL 254

Query: 181 EKYISNQKLHPG 192
           EKYIS QKLHP 
Sbjct: 255 EKYISIQKLHPS 266

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170058433|ref|XP_001864920.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877552|gb|EDS40935.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 149/191 (78%), Positives = 162/191 (84%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLSYDTRPE ++QLFTREW+LELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT
Sbjct: 63  YVRLSYDTRPELLVQLFTREWNLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 122

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDAL+++  QRSGRVVSIGIAPWGIV                 
Sbjct: 123 GAWIFTGGTNTGVTKQVGDALILDGQQRSGRVVSIGIAPWGIV----------------- 165

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN+DVP HSISSPRSK AVLNNRHAYFLLVDNG+ G+YGAE+ILRRKL
Sbjct: 166 ----ERNHELLGHNRDVPCHSISSPRSKLAVLNNRHAYFLLVDNGSQGRYGAELILRRKL 221

Query: 181 EKYISNQKLHP 191
           EKYISNQKL P
Sbjct: 222 EKYISNQKLQP 232

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713847|ref|XP_001950420.2| PREDICTED: transient receptor potential cation channel CG34123-like [Acyrthosiphon pisum]

 Score =  300 bits (767), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 150/192 (78%), Positives = 160/192 (83%), Gaps = 22/192 (11%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE IL LF REW LELPKLLIT+QGGKANFE+QPKLKKVLRKGLLKAAKTT
Sbjct: 97  YVRLSHDTRPETILHLFNREWGLELPKLLITIQGGKANFEIQPKLKKVLRKGLLKAAKTT 156

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAWVFTGGTNTGVTRQVGDALL++ SQR GRVVSIGIAPWGI+EN               
Sbjct: 157 GAWVFTGGTNTGVTRQVGDALLLD-SQRPGRVVSIGIAPWGIIEN--------------- 200

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
                 NHELIGHNKDVPYHSISSPRSK AVLNNRH YFLLVD+GT+G+YGAEI LR+KL
Sbjct: 201 ------NHELIGHNKDVPYHSISSPRSKLAVLNNRHTYFLLVDDGTSGRYGAEIELRKKL 254

Query: 181 EKYISNQKLHPG 192
           EKYIS QKLHP 
Sbjct: 255 EKYISIQKLHPS 266

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161077096|ref|NP_001097320.1| trpm, isoform E [Drosophila melanogaster] gi|190410958|sp|A8DYE2.1|TRPCG_DROME RecName: Full=Transient receptor potential cation channel trpm gi|157400338|gb|ABV53803.1| trpm, isoform E [Drosophila melanogaster]

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 143/191 (74%), Positives = 159/191 (83%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKTT
Sbjct: 194 YVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTT 253

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIV                 
Sbjct: 254 GAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIV----------------- 296

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN++VP HSISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKL
Sbjct: 297 ----ERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKL 352

Query: 181 EKYISNQKLHP 191
           EK+ISN KLHP
Sbjct: 353 EKFISNLKLHP 363

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221330283|ref|NP_001137673.1| trpm, isoform G [Drosophila melanogaster] gi|220902229|gb|ACL83127.1| trpm, isoform G [Drosophila melanogaster]

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 143/191 (74%), Positives = 159/191 (83%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKTT
Sbjct: 99  YVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTT 158

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIV                 
Sbjct: 159 GAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIV----------------- 201

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN++VP HSISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKL
Sbjct: 202 ----ERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKL 257

Query: 181 EKYISNQKLHP 191
           EK+ISN KLHP
Sbjct: 258 EKFISNLKLHP 268

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221330281|ref|NP_001137672.1| trpm, isoform F [Drosophila melanogaster] gi|220902228|gb|ACL83126.1| trpm, isoform F [Drosophila melanogaster]

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 143/191 (74%), Positives = 159/191 (83%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKTT
Sbjct: 92  YVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTT 151

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIV                 
Sbjct: 152 GAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIV----------------- 194

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN++VP HSISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKL
Sbjct: 195 ----ERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKL 250

Query: 181 EKYISNQKLHP 191
           EK+ISN KLHP
Sbjct: 251 EKFISNLKLHP 261

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|116007702|ref|NP_001036549.1| trpm, isoform D [Drosophila melanogaster] gi|113194657|gb|ABI31097.1| trpm, isoform D [Drosophila melanogaster]

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 143/191 (74%), Positives = 159/191 (83%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           YVRLS+DTRPE ++QLFT+EW+LELPKLLITVQGGKANF+LQ KLKK +RKGLLKAAKTT
Sbjct: 92  YVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTT 151

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+QVGDALL+E  QR+GRVVSIGIAPWGIV                 
Sbjct: 152 GAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIV----------------- 194

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               E NHEL+GHN++VP HSISSPRSK AVLNNRHAYFLLVDNGT  KYGAE+ILRRKL
Sbjct: 195 ----ERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKL 250

Query: 181 EKYISNQKLHP 191
           EK+ISN KLHP
Sbjct: 251 EKFISNLKLHP 261

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239436|ref|XP_974857.2| PREDICTED: similar to AGAP006825-PA [Tribolium castaneum]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/191 (71%), Positives = 162/191 (84%), Gaps = 21/191 (10%)

Query: 1   YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTT 60
           Y+R+++DT+PE+++QL T+EW+LELPKLLI++QGGKANFELQPKLKKVLRKGLLKAA++T
Sbjct: 59  YIRVAHDTKPEHLMQLITKEWNLELPKLLISIQGGKANFELQPKLKKVLRKGLLKAARST 118

Query: 61  GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELIVCRPEQPARL 120
           GAW+FTGGTNTGVT+ +GDALL+ERSQR+GRV ++GIAPWGIV                 
Sbjct: 119 GAWIFTGGTNTGVTKHIGDALLLERSQRTGRVNTLGIAPWGIV----------------- 161

Query: 121 FPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYFLLVDNGTAGKYGAEIILRRKL 180
               ENN ELIGHN +VPYHSISSPRSKFA LNNRHAYFLLVDNGT GKYGAEI+LRR+L
Sbjct: 162 ----ENNQELIGHNTEVPYHSISSPRSKFAALNNRHAYFLLVDNGTVGKYGAEIVLRRRL 217

Query: 181 EKYISNQKLHP 191
           EKYIS Q+L+P
Sbjct: 218 EKYISKQRLYP 228

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
UNIPROTKB|F1MPU3	1644	TRPM1 "Uncharacterized protein	0.44	0.066	0.545	8.4e-46
UNIPROTKB|F1SNR3	1648	TRPM1 "Uncharacterized protein	0.44	0.066	0.545	2.2e-45
UNIPROTKB|F1NCK1	1618	TRPM1 "Uncharacterized protein	0.44	0.067	0.545	2.7e-45
UNIPROTKB|F1PRL9	1647	TRPM1 "Uncharacterized protein	0.44	0.066	0.545	7.5e-45
UNIPROTKB|H0YKU7	1390	TRPM1 "Transient receptor pote	0.44	0.079	0.536	7.6e-45
UNIPROTKB|Q7Z4N2	1603	TRPM1 "Transient receptor pote	0.44	0.068	0.536	1.1e-44
UNIPROTKB|F8W865	1625	TRPM1 "Transient receptor pote	0.44	0.067	0.536	1.2e-44
UNIPROTKB|D9IDV3	1642	TRPM1 "Transient receptor pote	0.44	0.066	0.536	1.2e-44
UNIPROTKB|G8JLG6	859	TRPM6 "Transient receptor pote	0.44	0.128	0.427	4.3e-37
UNIPROTKB|G8JLG7	977	TRPM6 "Transient receptor pote	0.44	0.112	0.427	6.5e-37

UNIPROTKB|F1MPU3 TRPM1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 324 (119.1 bits), Expect = 8.4e-46, Sum P(2) = 8.4e-46
 Identities = 60/110 (54%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  R+W LELPKLLI+V GG  NFE+QP               TT
Sbjct:   111 YIRVSYDTKPDSLLHLMVRDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 170

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+
Sbjct:   171 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLV 220

GO:0071482 "cellular response to light stimulus" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005261 "cation channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SNR3 TRPM1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 324 (119.1 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
 Identities = 60/110 (54%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  R+W LELPKLLI+V GG  NFE+QP               TT
Sbjct:   111 YIRVSYDTKPDSLLHLMVRDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAVTT 170

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+
Sbjct:   171 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLV 220

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

UNIPROTKB|F1NCK1 TRPM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 327 (120.2 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
 Identities = 60/110 (54%), Positives = 76/110 (69%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QP               TT
Sbjct:    94 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 153

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV R VGDAL    S+  GR+ +IGIAPWGIVEN  +LI
Sbjct:   154 GAWIFTGGVSTGVIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKEDLI 203

GO:0016021 "integral to membrane" evidence=IEA

GO:0005261 "cation channel activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0071482 "cellular response to light stimulus" evidence=IEA

UNIPROTKB|F1PRL9 TRPM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 321 (118.1 bits), Expect = 7.5e-45, Sum P(2) = 7.5e-45
 Identities = 60/110 (54%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QP               TT
Sbjct:   118 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 177

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +LI
Sbjct:   178 GAWIFTGGISTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLI 227

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

UNIPROTKB|H0YKU7 TRPM1 "Transient receptor potential cation channel subfamily M member 1" [Homo sapiens (taxid:9606)]

 Score = 321 (118.1 bits), Expect = 7.6e-45, Sum P(2) = 7.6e-45
 Identities = 59/110 (53%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QP               TT
Sbjct:    72 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 131

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+
Sbjct:   132 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLV 181

GO:0016021 "integral to membrane" evidence=IEA

GO:0005261 "cation channel activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0071482 "cellular response to light stimulus" evidence=IEA

UNIPROTKB|Q7Z4N2 TRPM1 "Transient receptor potential cation channel subfamily M member 1" [Homo sapiens (taxid:9606)]

 Score = 321 (118.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 59/110 (53%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QP               TT
Sbjct:    72 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 131

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+
Sbjct:   132 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLV 181

GO:0007165 "signal transduction" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0007601 "visual perception" evidence=IMP

GO:0071482 "cellular response to light stimulus" evidence=IMP

GO:0006810 "transport" evidence=TAS

GO:0005262 "calcium channel activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0070588 "calcium ion transmembrane transport" evidence=TAS

UNIPROTKB|F8W865 TRPM1 "Transient receptor potential cation channel subfamily M member 1" [Homo sapiens (taxid:9606)]

 Score = 321 (118.1 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
 Identities = 59/110 (53%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QP               TT
Sbjct:    94 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 153

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+
Sbjct:   154 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLV 203

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|D9IDV3 TRPM1 "Transient receptor potential melastatin family isoform 1 splice variant" [Homo sapiens (taxid:9606)]

 Score = 321 (118.1 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
 Identities = 59/110 (53%), Positives = 75/110 (68%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R+SYDT+P+++L L  ++W LELPKLLI+V GG  NFE+QP               TT
Sbjct:   111 YIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTT 170

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+FTGG +TGV   VGDAL    S+  GRV +IGIAPWGIVEN  +L+
Sbjct:   171 GAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLV 220

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G8JLG6 TRPM6 "Transient receptor potential cation channel subfamily M member 6" [Homo sapiens (taxid:9606)]

 Score = 260 (96.6 bits), Expect = 4.3e-37, Sum P(2) = 4.3e-37
 Identities = 47/110 (42%), Positives = 67/110 (60%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R SYDT+ +++L L  +EW +ELPKL+I+V GG  NF +                 TT
Sbjct:   111 YIRTSYDTKLDHLLHLMLKEWKMELPKLVISVHGGIQNFTMPSKFKEIFSQGLVKAAETT 170

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+ T G NTGV++ VGDAL    S    ++ ++GI PWG++EN  +LI
Sbjct:   171 GAWIITEGINTGVSKHVGDALKSHSSHSLRKIWTVGIPPWGVIENQRDLI 220

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|G8JLG7 TRPM6 "Transient receptor potential cation channel subfamily M member 6" [Homo sapiens (taxid:9606)]

 Score = 260 (96.6 bits), Expect = 6.5e-37, Sum P(2) = 6.5e-37
 Identities = 47/110 (42%), Positives = 67/110 (60%)

Query:     1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPXXXXXXXXXXXXXXXTT 60
             Y+R SYDT+ +++L L  +EW +ELPKL+I+V GG  NF +                 TT
Sbjct:   111 YIRTSYDTKLDHLLHLMLKEWKMELPKLVISVHGGIQNFTMPSKFKEIFSQGLVKAAETT 170

Query:    61 GAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVENNHELI 110
             GAW+ T G NTGV++ VGDAL    S    ++ ++GI PWG++EN  +LI
Sbjct:   171 GAWIITEGINTGVSKHVGDALKSHSSHSLRKIWTVGIPPWGVIENQRDLI 220

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8DYE2	TRPCG_DROME	No assigned EC number	0.7486	0.68	0.0840	yes	N/A
Q9HCF6	TRPM3_HUMAN	No assigned EC number	0.5578	0.676	0.0975	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
KOG3614|consensus	1381		100.0
KOG3614|consensus	1381		98.5
TIGR00730	178	conserved hypothetical protein, DprA/Smf-related,	94.21
TIGR00725	159	conserved hypothetical protein, DprA/Smf-related,	93.58
COG1611	205	Predicted Rossmann fold nucleotide-binding protein	83.12

>KOG3614|consensus

Probab=100.00  E-value=6.3e-61  Score=493.75  Aligned_cols=189  Identities=55%  Similarity=0.943  Sum_probs=177.6

Q ss_pred             CEeecCCCChHHHHHHhHhhhcCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHH
Q psy16990          1 YVRLSYDTRPENILQLFTREWSLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDA   80 (250)
Q Consensus         1 yiRls~dt~p~~i~~Ll~~~W~L~~P~LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~A   80 (250)
                      |||+|+||+|+.|++||+++|+|++|+|||||+||++||+|+|||+++|||||+||||||||||||||+++|||||||+|
T Consensus        92 yiR~S~dt~P~~i~hLm~k~W~l~~P~LvISV~GG~~nF~L~pkl~~~frkGLvkaAqtTGAWIiTsG~~tGv~khVg~A  171 (1381)
T KOG3614|consen   92 YIRVSYDTDPGAILHLMTKEWQLEVPKLVISVHGGLQNFELQPKLKSVFRKGLIKAAQTTGAWIITSGLDTGVMKHVGSA  171 (1381)
T ss_pred             eEEeCCCCChHHHHHHHHHHhCcCCCcEEEEEecCCCCccccHHHHHHHHHHHHHHHhhcCeEEEecCcccchHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCC-ceEEEeecccceeeccccccccCCCCCCcccCCCCCcccccCCCCcccccccCCCCCCcccccCCCcEE
Q psy16990         81 LLMERSQRSG-RVVSIGIAPWGIVENNHELIVCRPEQPARLFPIGENNHELIGHNKDVPYHSISSPRSKFAVLNNRHAYF  159 (250)
Q Consensus        81 v~d~~s~~~~-kv~~IGIApWG~V~nr~~L~~~~~~~P~~~~~~~~~~~~l~g~~~~~~y~~~~~~~~~~~~Ld~nHshF  159 (250)
                      ++||++.+++ |||+|||||||+|+||                     ++|||.|.+++|+.++++.+++..||+|||||
T Consensus       172 l~dh~~~s~~~~ivaiGiApWGvv~nr---------------------~~lI~~d~~~~Y~~~~~~~~~L~~Ln~nhShF  230 (1381)
T KOG3614|consen  172 LRDHSLASSGGKIVAIGIAPWGIVKNR---------------------DDLIGGDFTVSYQTDDNPLNKLTILNNNHSHF  230 (1381)
T ss_pred             HHhccchhccCceEEEeeccceeeech---------------------hhhccCCcceeeeecCCCCcceeeccCCCcee
Confidence            9999877665 9999999999999999                     67778888899999999988999999999999


Q ss_pred             EEeeCCCCCCCChhHHHHHHHHHHhhhccCCCCcccccC-----CCCCCCCCcccc
Q psy16990        160 LLVDNGTAGKYGAEIILRRKLEKYISNQKLHPGKSKIVG-----AKGGENGEPLVF  210 (250)
Q Consensus       160 lLVDdGt~g~~G~E~~lR~~LE~~Is~q~~~~~~~~~v~-----~~~~~nge~lvq  210 (250)
                      |||||||+|+||+|++||.+||+|||+|+++.+..++||     .+|++|....+.
T Consensus       231 iLvDnGTvGkygae~~lR~~LEk~Is~q~~~~~~~~~iPvvc~v~eGg~nti~~I~  286 (1381)
T KOG3614|consen  231 ILVDNGTVGKYGAETKLRLRLEKYISLQKINSGGTGKIPVVCLVLEGGPNTLAIIL  286 (1381)
T ss_pred             EEecCCccCccchHHHHHHhchhhHhhhccCCCCCCccceEEEEecCCchHHHHHH
Confidence            999999999999999999999999999999998877888     566666555443

>KOG3614|consensus

Probab=98.50  E-value=4.8e-08  Score=103.56  Aligned_cols=37  Identities=41%  Similarity=0.600  Sum_probs=33.7

Q ss_pred             CCCCcccccccCCCCCCCcceEEEEcCCCCCCCccccC
Q psy16990        212 STNEIWTASLHTSPSNTDAYGTIEFQGGPHPSKAQVRY  249 (250)
Q Consensus       212 ~~~~~ws~~~ht~~~pTda~g~i~Fq~~~~~~ka~y~~  249 (250)
                      ..+.+|+++|||+.+||||||+|+|||++|.. |||+|
T Consensus        58 ~~~~~W~~~~ht~~~pTdafG~i~F~G~~~~~-akyiR   94 (1381)
T KOG3614|consen   58 TDPVKWDMSKHTDTVPTDAFGDIVFQGGGHKP-AKYIR   94 (1381)
T ss_pred             CCCCCCChhhCCccccccceeeEEeccCCcCc-ceeEE
Confidence            34466999999999999999999999999988 99997

>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2

Probab=94.21  E-value=0.19  Score=43.45  Aligned_cols=67  Identities=21%  Similarity=0.295  Sum_probs=46.5

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeeccccee
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIV  103 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG~V  103 (250)
                      .|+|.||++.-.-++. .+.-++ |-++.-..|-=++|||-+.|+|..+.+++++..    +  ..|||.|-...
T Consensus         2 ~i~V~~~s~~~~~~~~-~~~A~~-lG~~la~~g~~lV~GGg~~GlM~a~a~ga~~~g----G--~viGi~p~~l~   68 (178)
T TIGR00730         2 TVCVYCGSSPGGNAAY-KELAAE-LGAYLAGQGWGLVYGGGRVGLMGAIADAAMENG----G--TAVGVNPSGLF   68 (178)
T ss_pred             EEEEECcCCCCCCcHH-HHHHHH-HHHHHHHCCCEEEECCChHhHHHHHHHHHHhcC----C--eEEEecchhhh
Confidence            5899999876443433 333333 444433458889999999999999999998643    2  36999887643

This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.

>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1

Probab=93.58  E-value=0.3  Score=41.36  Aligned_cols=63  Identities=27%  Similarity=0.344  Sum_probs=44.5

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecccce
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGI  102 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG~  102 (250)
                      .|+|.|+.+   ..+...+.-++ |-+..-..|.-|++|| ..|+|..+.+++.+..    +  ..|||-|-+.
T Consensus         3 ~I~V~gss~---~~~~~~~~A~~-lg~~La~~g~~lv~Gg-~~GlM~a~a~ga~~~g----g--~viGVlp~~l   65 (159)
T TIGR00725         3 QIGVIGSSN---KSEELYEIAYR-LGKELAKKGHILINGG-RTGVMEAVSKGAREAG----G--LVVGILPDED   65 (159)
T ss_pred             EEEEEeCCC---CChHHHHHHHH-HHHHHHHCCCEEEcCC-chhHHHHHHHHHHHCC----C--eEEEECChhh
Confidence            589999987   35565655555 5555555687778855 4599999999998643    2  3588888654

This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.

>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]

Probab=83.12  E-value=5.1  Score=35.45  Aligned_cols=71  Identities=27%  Similarity=0.272  Sum_probs=46.8

Q ss_pred             CCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecccceee
Q psy16990         26 PKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWGIVE  104 (250)
Q Consensus        26 P~LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG~V~  104 (250)
                      .-.-|+|.+|...-..+..+.+.-++ |-++.-.-|.-|+||| ..|||..+.+...+...      ..|||-|=....
T Consensus        13 ~~~~i~V~~gs~~~~~~~~~~~~a~~-lg~~la~~g~~V~tGG-~~GiMea~~~gA~~~gg------~~vGi~p~~~~~   83 (205)
T COG1611          13 GIRQIVVICGSARGIEPEEYYELARE-LGRELAKRGLLVITGG-GPGVMEAVARGALEAGG------LVVGILPGLLHE   83 (205)
T ss_pred             CcceEEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCcEEEeCC-chhhhhHHHHHHHHcCC------eEEEecCCCchh
Confidence            34456677776654444445555555 5556555677777777 56999999999996543      568888765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
3sbx_A	189	Putative uncharacterized protein; structural genom	95.69
3qua_A	199	Putative uncharacterized protein; structural genom	95.39
2iz6_A	176	Molybdenum cofactor carrier protein; metal transpo	93.97
1ydh_A	216	AT5G11950; structural genomics, protein structure	93.78
2a33_A	215	Hypothetical protein; structural genomics, protein	92.1
1t35_A	191	Hypothetical protein YVDD, putative lysine decarbo	91.74
1weh_A	171	Conserved hypothetical protein TT1887; rossman fol	90.22
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	88.34
1wek_A	217	Hypothetical protein TT1465; rossman fold, structu	86.39
3bq9_A	460	Predicted rossmann fold nucleotide-binding domain	83.44

>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}

Probab=95.69  E-value=0.03  Score=47.68  Aligned_cols=68  Identities=21%  Similarity=0.242  Sum_probs=49.5

Q ss_pred             CCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeeccc
Q psy16990         24 ELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  100 (250)
Q Consensus        24 ~~P~LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  100 (250)
                      +.++.-|+|.||++  ...+...+.-++ |-++.-..|--|||||-..|||..+.++..+..    +  ..|||-|-
T Consensus        10 ~~~~~~I~Vfg~s~--~~~~~~~~~A~~-lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~G----G--~viGv~p~   77 (189)
T 3sbx_A           10 EPGRWTVAVYCAAA--PTHPELLELAGA-VGAAIAARGWTLVWGGGHVSAMGAVSSAARAHG----G--WTVGVIPK   77 (189)
T ss_dssp             ---CCEEEEECCSS--CCCHHHHHHHHH-HHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTT----C--CEEEEEET
T ss_pred             CCCCeEEEEEEeCC--CCChHHHHHHHH-HHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC----C--cEEEEcCc
Confidence            35668899999998  555665555555 555555568899999999999999999998643    2  35777654

>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}

Probab=95.39  E-value=0.047  Score=46.88  Aligned_cols=67  Identities=16%  Similarity=0.249  Sum_probs=50.1

Q ss_pred             CCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecccc
Q psy16990         26 PKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWG  101 (250)
Q Consensus        26 P~LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG  101 (250)
                      .+.-|+|.||++  ...+...+.-++ |-++.-..|--|||||-..|||..+.++..+...      .+|||-|-.
T Consensus        21 ~~~~v~Vfggs~--~~~~~~~~~A~~-lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG------~viGv~p~~   87 (199)
T 3qua_A           21 RQWAVCVYCASG--PTHPELLELAAE-VGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGG------HTVGVIPKA   87 (199)
T ss_dssp             CCCEEEEECCSS--CCCHHHHHHHHH-HHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTC------CEEEEEEGG
T ss_pred             CCCEEEEEECCC--CCCHHHHHHHHH-HHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCC------cEEEEeCch
Confidence            346899999998  556666665555 5556555688899999999999999999986532      357776553

>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A

Probab=93.97  E-value=0.16  Score=42.52  Aligned_cols=71  Identities=24%  Similarity=0.269  Sum_probs=48.8

Q ss_pred             cCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeeccc
Q psy16990         22 SLELPKLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  100 (250)
Q Consensus        22 ~L~~P~LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  100 (250)
                      .++.....|+|+|+.. ....+...+.-++ |.+.....|--|||||-+.|||..+.++..+..    +  .+|||-|-
T Consensus         8 ~~~~~~~~VaV~Gs~~-~g~~~~~~~~A~~-lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~g----G--~tigVlP~   78 (176)
T 2iz6_A            8 CMSGRKPIIGVMGPGK-ADTAENQLVMANE-LGKQIATHGWILLTGGRSLGVMHEAMKGAKEAG----G--TTIGVLPG   78 (176)
T ss_dssp             ---CCCCEEEEECCCG-GGCCHHHHHHHHH-HHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTT----C--CEEEEECC
T ss_pred             cccCCCCeEEEEeCCC-CCCCHHHHHHHHH-HHHHHHHCCCEEEECCCccCHhHHHHHHHHHcC----C--EEEEEeCc
Confidence            3556667899999776 2334555555444 555555569999999999999999999998743    2  35777553

>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A

Probab=93.78  E-value=0.17  Score=43.83  Aligned_cols=63  Identities=16%  Similarity=0.140  Sum_probs=45.7

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecc
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP   99 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp   99 (250)
                      .|+|.||++.-. .+...+.-++ |-+..-..|.-|||||-..|||..+.++..+...      .+|||-|
T Consensus        11 ~V~V~ggsr~~~-~~~~~~~A~~-lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG------~~iGv~p   73 (216)
T 1ydh_A           11 KICVFCGSHSGH-REVFSDAAIE-LGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL------HVLGIIP   73 (216)
T ss_dssp             EEEEECCSCCCS-SHHHHHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC------CEEEEEE
T ss_pred             eEEEEeCCCCCC-CcHHHHHHHH-HHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC------cEEEEec
Confidence            799999988643 3344444444 5555555699999999999999999999986532      3677765

>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A

Probab=92.10  E-value=0.57  Score=40.37  Aligned_cols=66  Identities=20%  Similarity=0.122  Sum_probs=46.0

Q ss_pred             CeEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeeccc
Q psy16990         27 KLLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  100 (250)
Q Consensus        27 ~LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  100 (250)
                      .-.|+|++|+.+-.- +...+.-++ |-+.....|--|||||-..|||..+.++..+..    +  .+|||-|-
T Consensus        13 m~~IaV~cGS~~~~~-~~y~~~A~~-lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~G----G--~tiGVlP~   78 (215)
T 2a33_A           13 FRRICVFCGSSQGKK-SSYQDAAVD-LGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG----R--HVIGIIPK   78 (215)
T ss_dssp             CSEEEEECCSSCCSS-HHHHHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTT----C--CEEEEEES
T ss_pred             CCeEEEEECCCCCCc-hHHHHHHHH-HHHHHHHCCCEEEECCChhhHhHHHHHHHHHcC----C--cEEEEcch
Confidence            347999988887553 333343333 555544569999999999999999999988643    2  35777554

>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1

Probab=91.74  E-value=0.46  Score=40.04  Aligned_cols=65  Identities=23%  Similarity=0.330  Sum_probs=44.8

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecccc
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPWG  101 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApWG  101 (250)
                      .|+|.||++.-. .+...+.-++ |-+..-..|.-|||||-..|||..+.++..+...      .+|||-|=+
T Consensus         3 ~V~V~gss~~~~-~~~~~~~A~~-lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~gG------~~iGv~p~~   67 (191)
T 1t35_A            3 TICVFAGSNPGG-NEAYKRKAAE-LGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGG------TAIGVMPSG   67 (191)
T ss_dssp             EEEEECCSSCCS-STHHHHHHHH-HHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTC------CEEEEEETT
T ss_pred             EEEEEECCCCCC-ChHHHHHHHH-HHHHHHHCCCEEEECCCcccHHHHHHHHHHHcCC------eEEEEeCch
Confidence            489999887422 3333444344 4445444699999999999999999999987532      357775543

>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1

Probab=90.22  E-value=0.85  Score=37.68  Aligned_cols=62  Identities=15%  Similarity=0.166  Sum_probs=42.7

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecc
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP   99 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp   99 (250)
                      .|+|+|+++.-. .+...+.-++ |-+.....|--|||||-. |||..+.++..+..    +  .+|||-|
T Consensus         3 ~V~V~gs~~~~~-~~~~~~~A~~-lg~~La~~g~~lV~Ggg~-GiM~aa~~gAl~~g----G--~tiGV~~   64 (171)
T 1weh_A            3 LLAVFVSSRLSP-EDPLYARWVR-YGEVLAEEGFGLACGGYQ-GGMEALARGVKAKG----G--LVVGVTA   64 (171)
T ss_dssp             EEEEECCSSCCT-TSHHHHHHHH-HHHHHHHTTEEEEECCSS-THHHHHHHHHHHTT----C--CEEECCC
T ss_pred             EEEEEeCCCCCC-CcHHHHHHHH-HHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcC----C--cEEEEec
Confidence            589999887633 2233344333 444544569999999997 99999999998643    2  3577754

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=88.34  E-value=1.1  Score=38.18  Aligned_cols=64  Identities=23%  Similarity=0.346  Sum_probs=42.0

Q ss_pred             EEEEecCCCCCCCc--HHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeeccc
Q psy16990         29 LITVQGGKANFELQ--PKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  100 (250)
Q Consensus        29 VISV~GGa~nf~l~--~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  100 (250)
                      .|+|+|+.+...-.  ....+.-++ |-+.....|--|||| ...|||..+.++..+..    +  .+|||-|-
T Consensus        25 ~IaV~Gss~~~~~~~~~~~~~~A~~-lg~~LA~~G~~vVsG-g~~GiM~aa~~gAl~~G----G--~~iGVlP~   90 (195)
T 1rcu_A           25 KVVVVGYSGPVNKSPVSELRDICLE-LGRTLAKKGYLVFNG-GRDGVMELVSQGVREAG----G--TVVGILPD   90 (195)
T ss_dssp             EEEEEECCSCTTSTTTGGGHHHHHH-HHHHHHHTTCEEEEC-CSSHHHHHHHHHHHHTT----C--CEEEEEST
T ss_pred             eEEEEecCCCCCccccHHHHHHHHH-HHHHHHHCCCEEEeC-CHHHHHHHHHHHHHHcC----C--cEEEEeCC
Confidence            69999998652110  033333333 444444469999996 57899999999998643    2  36777654

>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1

Probab=86.39  E-value=2.1  Score=36.88  Aligned_cols=54  Identities=26%  Similarity=0.197  Sum_probs=38.5

Q ss_pred             eEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhh
Q psy16990         28 LLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLME   84 (250)
Q Consensus        28 LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~   84 (250)
                      ..|+|.||++.-.-+ ...+.-++ |-+..-..|.-|||||- .|||..+.++..+.
T Consensus        38 ~~VaV~Gss~~~~~~-~~~~~A~~-lg~~La~~g~~lVsGGg-~GiM~aa~~gAl~~   91 (217)
T 1wek_A           38 PLVSVFGSARFGEGH-PAYEAGYR-LGRALAEAGFGVVTGGG-PGVMEAVNRGAYEA   91 (217)
T ss_dssp             CEEEEECCSSCCTTS-HHHHHHHH-HHHHHHHHTCEEEECSC-SHHHHHHHHHHHHT
T ss_pred             CEEEEEeCCCCCCCc-HHHHHHHH-HHHHHHHCCCEEEeCCh-hhHHHHHHHHHHHc
Confidence            479999998764322 33333333 44454456999999999 99999999999864

>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}

Probab=83.44  E-value=7.1  Score=37.45  Aligned_cols=64  Identities=19%  Similarity=0.230  Sum_probs=41.0

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchh-hHHHHHhhhhhcc--CCCceEEEeecc
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVT-RQVGDALLMERSQ--RSGRVVSIGIAP   99 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~-k~VG~Av~d~~s~--~~~kv~~IGIAp   99 (250)
                      ++++.||+..   .+...+.-++ |-++.-..|--|||||-. |+| -.+..|+..++.+  ..++  .|||-|
T Consensus       147 ivVv~GSs~~---~~~~Ye~A~e-LGr~LA~~G~~LVtGGG~-GlMEaa~aGA~~a~s~qr~~GG~--vIGIiP  213 (460)
T 3bq9_A          147 MVVCWGGHSI---NEIEYKYTKD-VGYHIGLRGLNICTGCGP-GAMKGPMKGATIGHAKQRVEGGR--YLGLTE  213 (460)
T ss_dssp             EEEEECCSSC---CHHHHHHHHH-HHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCSSCC--EEEEEC
T ss_pred             EEEEEcCCCC---CCHHHHHHHH-HHHHHHHCCCEEEeCCcH-HHhhHHHhhHHhhcccccCCCCE--EEEEeC
Confidence            6777887763   3333333333 444444579999999997 999 7788888764321  2344  578744

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	94.63
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	93.42
d1weha_	171	Hypothetical protein TT1887 (TTHA0294) {Thermus th	93.22
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	92.86
d1rcua_	170	Hypothetical protein TM1055 {Thermotoga maritima [	91.57
d1weka_	208	Hypothetical protein TT1465 (TTHA1644) {Thermus th	90.13

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=94.63  E-value=0.041  Score=43.96  Aligned_cols=62  Identities=23%  Similarity=0.334  Sum_probs=44.1

Q ss_pred             EEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecc
Q psy16990         30 ITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP   99 (250)
Q Consensus        30 ISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp   99 (250)
                      |+|.||++.-. .+...+.-++ |-+..-..|-.|||||-..|+|..+.+++++...    +  .|||.|
T Consensus         4 v~VF~~s~~~~-~~~~~~~a~~-lg~~la~~g~~lv~GGG~~GlMga~a~ga~~~gg----~--v~gv~~   65 (179)
T d1t35a_           4 ICVFAGSNPGG-NEAYKRKAAE-LGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGG----T--AIGVMP   65 (179)
T ss_dssp             EEEECCSSCCS-STHHHHHHHH-HHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTC----C--EEEEEE
T ss_pred             EEEEccCCCCc-CCHHHHHHHH-HHHHHHHCCCeEEECCCchHHHHHHhcchhhcCC----c--eecccc
Confidence            89999998644 3333333333 4445455799999999999999999999987542    2  467654

>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.42  E-value=0.11  Score=41.67  Aligned_cols=63  Identities=21%  Similarity=0.213  Sum_probs=45.4

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecc
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP   99 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp   99 (250)
                      =|+|.||++.-. .+...+.-++ |-+..-..|--|||||-..|+|..+.+++.+...    +  .|||.|
T Consensus         8 ~v~Vf~gs~~~~-~~~~~~~a~~-lg~~la~~g~~lV~GGG~~GlMga~a~ga~~~gg----~--v~Gi~~   70 (183)
T d2q4oa1           8 RICVFCGSSQGK-KSSYQDAAVD-LGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR----H--VIGIIP   70 (183)
T ss_dssp             EEEEECCSSCCS-SHHHHHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC----C--EEEEEE
T ss_pred             eEEEECcCCCCc-CCHHHHHHHH-HHHHHHHcCCeEEECCCCcchHHHHHHHHHhcCC----c--cccccc
Confidence            489999997544 4444444444 5566566788999999999999999999987542    3  466644

>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1887 (TTHA0294)
species: Thermus thermophilus [TaxId: 274]

Probab=93.22  E-value=0.14  Score=40.61  Aligned_cols=61  Identities=15%  Similarity=0.188  Sum_probs=42.4

Q ss_pred             EEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeec
Q psy16990         29 LITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIA   98 (250)
Q Consensus        29 VISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIA   98 (250)
                      .|+|.||++.-.-++-.+.+. + |-++.-..|-.++|||-. |+|..+.+.+++..    ++  +|||-
T Consensus         3 ~V~Vfgss~~~~~~~~~~~a~-~-lG~~la~~g~~lv~GGg~-G~M~a~a~ga~~~g----G~--~iGv~   63 (171)
T d1weha_           3 LLAVFVSSRLSPEDPLYARWV-R-YGEVLAEEGFGLACGGYQ-GGMEALARGVKAKG----GL--VVGVT   63 (171)
T ss_dssp             EEEEECCSSCCTTSHHHHHHH-H-HHHHHHHTTEEEEECCSS-THHHHHHHHHHHTT----CC--EEECC
T ss_pred             EEEEEecCCCCCCCHHHHHHH-H-HHHHHHHCCCceeeCcch-HHHHHHHHHHHhcc----Cc--eeeee
Confidence            489999997644344333332 2 444555569999999986 99999999999754    33  47874

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.86  E-value=0.13  Score=41.01  Aligned_cols=62  Identities=16%  Similarity=0.130  Sum_probs=42.3

Q ss_pred             EEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecc
Q psy16990         30 ITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP   99 (250)
Q Consensus        30 ISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp   99 (250)
                      |+|.||++.-.-++. .+.-++ |-+..-..|-=+||||-..|+|..+.+++.+...    +  .|||.|
T Consensus         5 v~Vf~gs~~~~~~~~-~~~a~~-lg~~La~~g~~lv~GGG~~GlMga~a~ga~~~gg----~--viGv~~   66 (181)
T d1ydhb_           5 ICVFCGSHSGHREVF-SDAAIE-LGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL----H--VLGIIP   66 (181)
T ss_dssp             EEEECCSCCCSSTHH-HHHHHH-HHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC----C--EEEEEE
T ss_pred             EEEEccCCCCcCCHH-HHHHHH-HHHHHHHCCCeEEECCCchHHHHHHHHhHhhcCC----c--ccccch
Confidence            799999975443433 333222 3333344577799999999999999999997543    3  477755

>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]

Probab=91.57  E-value=0.21  Score=39.29  Aligned_cols=62  Identities=26%  Similarity=0.439  Sum_probs=39.4

Q ss_pred             EEEecCCCCCCCcH--HHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeecc
Q psy16990         30 ITVQGGKANFELQP--KLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAP   99 (250)
Q Consensus        30 ISV~GGa~nf~l~~--~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIAp   99 (250)
                      |+|.|++..-.-+|  .++++-.+ |-+..-..|-=|+|||. .|+|..+.+.++++..    +  .|||-|
T Consensus         4 v~v~~~~~~~~~~p~~~~~~~a~~-lG~~la~~g~~V~~GG~-~GlM~ava~ga~~~gg----~--viGilP   67 (170)
T d1rcua_           4 VVVVGYSGPVNKSPVSELRDICLE-LGRTLAKKGYLVFNGGR-DGVMELVSQGVREAGG----T--VVGILP   67 (170)
T ss_dssp             EEEEECCSCTTSTTTGGGHHHHHH-HHHHHHHTTCEEEECCS-SHHHHHHHHHHHHTTC----C--EEEEES
T ss_pred             EEEEEEecCCCCCcchHHHHHHHH-HHHHHHHCCCEEECCCc-cCHHHHHHHHHHhcCC----c--cccccc
Confidence            57888875544333  45555444 33333335766677665 7999999999987643    3  578855

>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1465 (TTHA1644)
species: Thermus thermophilus [TaxId: 274]

Probab=90.13  E-value=0.38  Score=39.16  Aligned_cols=64  Identities=28%  Similarity=0.267  Sum_probs=43.9

Q ss_pred             eEEEEecCCCCCCCcHHHHHHHHHHHHHHhhhcCcEEEeCCcccchhhHHHHHhhhhhccCCCceEEEeeccc
Q psy16990         28 LLITVQGGKANFELQPKLKKVLRKGLLKAAKTTGAWVFTGGTNTGVTRQVGDALLMERSQRSGRVVSIGIAPW  100 (250)
Q Consensus        28 LVISV~GGa~nf~l~~~L~~~f~~GLikAAqsTgAWIiTgG~~~GV~k~VG~Av~d~~s~~~~kv~~IGIApW  100 (250)
                      ..|+|.||++.-.-++..+.+..  |-+..-..|-=|||||-. |+|..|.+++++...    +  .|||.+.
T Consensus        34 ~~V~Vfgsa~~~~~~~~y~~A~~--LG~~La~~g~~lv~GGg~-GlMgava~ga~~~gG----~--viGi~~~   97 (208)
T d1weka_          34 PLVSVFGSARFGEGHPAYEAGYR--LGRALAEAGFGVVTGGGP-GVMEAVNRGAYEAGG----V--SVGLNIE   97 (208)
T ss_dssp             CEEEEECCSSCCTTSHHHHHHHH--HHHHHHHHTCEEEECSCS-HHHHHHHHHHHHTTC----C--EEEEEEC
T ss_pred             CeEEEECCCCCCCcChHHHHHHH--HHHHHHhCcceEEeCCCc-hHHHHHHhhhhhcCC----c--eeccccc
Confidence            45999999986544444333322  444444468889999996 999999999886543    3  5788553