Psyllid ID: psy16996

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGLLSPPRSPRLLSPPVPGEIPPPSAISGGPTARNFRRCRHASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNEETASEIRANFKKNSLFNIP
Secondary Structure (PSIPRED)
ccEEcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccccccccHHcHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcHHHHHHHHccccHccEcccc
Coil and Loop (DISEMBL)
MYVWMFQRFTVVMEyeqkpalpppfiILSHILLFIKYLRRKCEGVRETYDNGLKlfldkedlerLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDInqkensqnSSIQVMSSLAFLRTTLVAFWNSGITDELETVcgllspprsprllsppvpgeipppsaisggptarnfrrcrhasemsnpEMAVYLEKEHLRDAEESDYHLMEEIIHTrfnnkeagsdadkfdnnaffltVNEETASEIRANfkknslfnip
Flexible Loop (DISEMBL)
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETydnglklfldkedleRLYDFEEECvegyfreketklamstderirntterveninqkvedinqkensqNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGLLSPPRSPRLLSPPVPGEipppsaisggptARNFRRCRHASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRfnnkeagsdadKFDNNAFFLTVNEEtaseiranfkknslfnip
Low Complexity Region (SEG)
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGllspprsprllsppvpgeipppSAISGGPTARNFRRCRHASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNEETASEIRANFKKNSLFNIP
Disordered region (IsUnstruct)
*YVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFRE******************************************VMSSLAFLRTTLVAFWNSGITDELETVCGLL**************************************************************YHLMEEIIHTRF***********FDNNAFFLTVN********************
Disordered Region (DISOPRED)
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGY*********************RVENINQKVED*************************************************************************************************************************************AFFLTVN**********FKKNSLFNI*
Disordered Region (DISEMBL)
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGLLSPPRSPRLLSPPVPGEIPPPSAISGGPTARNFRRCRHASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNEETASEIRANFKKNSLFNIP
Disordered Region (DISPRO)
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGLLSP**************************************MSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNEETASEIRANFKKNSLFNIP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDLERLYDFEEECVEGYFREKETKLxxxxxxxxxxxxxxxxxxxxxxxxxxxxENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGLLSPPRSPRLLSPPVPGEIPPPSAISGGPTARNFRRCRHASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNNKEAGSDADKFDNNAFFLTVNEETASEIRANFKKNSLFNIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	268	2.2.26 [Sep-21-2011]
A8DYE2	2023	Transient receptor potent	yes	N/A	0.369	0.048	0.680	2e-44
Q2WEA5	1628	Transient receptor potent	yes	N/A	0.541	0.089	0.431	2e-30
Q9HCF6	1732	Transient receptor potent	yes	N/A	0.451	0.069	0.443	7e-28
Q2TV84	1622	Transient receptor potent	no	N/A	0.541	0.089	0.437	6e-25
Q7Z4N2	1603	Transient receptor potent	no	N/A	0.541	0.090	0.437	1e-24
Q923J1	1863	Transient receptor potent	no	N/A	0.447	0.064	0.435	5e-23
Q925B3	1862	Transient receptor potent	no	N/A	0.447	0.064	0.435	6e-23
Q96QT4	1865	Transient receptor potent	no	N/A	0.447	0.064	0.435	8e-23
Q8CIR4	2028	Transient receptor potent	no	N/A	0.410	0.054	0.450	2e-17
Q9BX84	2022	Transient receptor potent	no	N/A	0.399	0.052	0.464	3e-15

>sp|A8DYE2|TRPCG_DROME Transient receptor potential cation channel trpm OS=Drosophila melanogaster GN=trpm PE=1 SV=1

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 97/119 (81%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDL 62
            VWMFQRFTVVMEY+QKP LPPPFI L H    +KY  RK +G+    DNGLKLFL+K+DL
Sbjct: 1172 VWMFQRFTVVMEYQQKPVLPPPFIALCHFYSLLKYCVRKAKGLEVQRDNGLKLFLEKDDL 1231

Query: 63   ERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
            ERLYDFEEECVEG+F E+E  L  STDER++NTTERVE ++QK+EDINQKEN Q +++Q
Sbjct: 1232 ERLYDFEEECVEGFFHEQEIILNQSTDERVKNTTERVETMSQKIEDINQKENIQTATVQ 1290

Calcium channel mediating constitutive calcium ion entry.
Drosophila melanogaster (taxid: 7227)

>sp|Q2WEA5|TRPM1_RAT Transient receptor potential cation channel subfamily M member 1 OS=Rattus norvegicus GN=Trpm1 PE=2 SV=1

 Score =  132 bits (332), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 8/153 (5%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKC----EGVRETYDNGLKLFLD 58
            VW FQR+ ++M +  +P LPPP IILSHI + +  L  +C    EG +E  D GLKLFL 
Sbjct: 1140 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIVMRLSGRCRKKREGDQEERDRGLKLFLS 1199

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             E+L++L++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++EN   +
Sbjct: 1200 DEELKKLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKA 1259

Query: 119  SIQVMSSLAFLRTTLVAFWNSGITDELETVCGL 151
            S+Q +     LR + +   +  +   LE + G+
Sbjct: 1260 SLQTVD----LRLSQLEELSGRMVGALENLAGI 1288

Calcium channel which may play a role in metastasis suppression. May act as a spontaneously active, calcium-permeable plasma membrane channel.

Rattus norvegicus (taxid: 10116)

>sp|Q9HCF6|TRPM3_HUMAN Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4

 Score =  124 bits (311), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 90/124 (72%), Gaps = 3/124 (2%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL---RRKCEGVRETYDNGLKLFLDK 59
            VW FQR+ ++M + ++P LPPP II SH+ +  ++L    RK E   +  D GLKLF+  
Sbjct: 1151 VWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHLCCRWRKHESDPDERDYGLKLFITD 1210

Query: 60   EDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSS 119
            ++L++++DFEE+C+E YFREK+ +   S DERIR T+ERVEN++ ++E++N++E+S  +S
Sbjct: 1211 DELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHSMKAS 1270

Query: 120  IQVM 123
            +Q +
Sbjct: 1271 LQTV 1274

Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation.

Homo sapiens (taxid: 9606)

>sp|Q2TV84|TRPM1_MOUSE Transient receptor potential cation channel subfamily M member 1 OS=Mus musculus GN=Trpm1 PE=2 SV=2

 Score =  114 bits (286), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 102/153 (66%), Gaps = 8/153 (5%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKC----EGVRETYDNGLKLFLD 58
            VW FQR+ ++M +  +P LPPP IILSHI + I  L  +C    EG +E  D GLKLFL 
Sbjct: 1134 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1193

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             E+L++L++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++EN   +
Sbjct: 1194 DEELKKLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKT 1253

Query: 119  SIQVMSSLAFLRTTLVAFWNSGITDELETVCGL 151
            S+Q +     LR + +   +  +   LE + G+
Sbjct: 1254 SLQTVD----LRLSQLEELSGRMVSALENLAGI 1282

Cation channel essential for the depolarizing photoresponse of retinal ON bipolar cells. It is part of the GRM6 signaling cascade. Calcium channel which may play a role in metastasis suppression. May act as a spontaneously active, calcium-permeable plasma membrane channel.

Mus musculus (taxid: 10090)

>sp|Q7Z4N2|TRPM1_HUMAN Transient receptor potential cation channel subfamily M member 1 OS=Homo sapiens GN=TRPM1 PE=1 SV=2

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 102/153 (66%), Gaps = 8/153 (5%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKC----EGVRETYDNGLKLFLD 58
            VW FQR+ ++M +  +P LPPP IILSHI + I  L  +C    EG +E  D GLKLFL 
Sbjct: 1089 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1148

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             E+L+RL++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++E    +
Sbjct: 1149 DEELKRLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKT 1208

Query: 119  SIQVMSSLAFLRTTLVAFWNSGITDELETVCGL 151
            S+Q +     LR   +   ++ + + LE + G+
Sbjct: 1209 SLQTVD----LRLAQLEELSNRMVNALENLAGI 1237

Cation channel essential for the depolarizing photoresponse of retinal ON bipolar cells. It is part of the GRM6 signaling cascade. May play a role in metastasis suppression (By similarity). May act as a spontaneously active, calcium-permeable plasma membrane channel.

Homo sapiens (taxid: 9606)

>sp|Q923J1|TRPM7_MOUSE Transient receptor potential cation channel subfamily M member 7 OS=Mus musculus GN=Trpm7 PE=1 SV=1

 Score =  108 bits (269), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 82/124 (66%), Gaps = 4/124 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHIL-LFIKYLRRKCEGVRETYDNGLKLFLDKED 61
            VW +QR+  +M Y +KP LPPP IILSHI+ LF    +R+    ++   +G KLFL +ED
Sbjct: 1110 VWKYQRYHFIMAYHEKPVLPPPLIILSHIVSLFCCVCKRR---KKDKTSDGPKLFLTEED 1166

Query: 62   LERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
             ++L+DFEE+CVE YF EK+ K    ++ERIR T ERVE ++ +++++  + N    S+Q
Sbjct: 1167 QKKLHDFEEQCVEMYFDEKDDKFNSGSEERIRVTFERVEQMSIQIKEVGDRVNYIKRSLQ 1226

Query: 122  VMSS 125
             + S
Sbjct: 1227 SLDS 1230

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q925B3|TRPM7_RAT Transient receptor potential cation channel subfamily M member 7 OS=Rattus norvegicus GN=Trpm7 PE=1 SV=2

 Score =  108 bits (269), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 82/124 (66%), Gaps = 4/124 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHIL-LFIKYLRRKCEGVRETYDNGLKLFLDKED 61
            VW +QR+  +M Y +KP LPPP IILSHI+ LF    +R+    ++   +G KLFL +ED
Sbjct: 1110 VWKYQRYHFIMAYHEKPVLPPPLIILSHIVSLFCCICKRR---KKDKTSDGPKLFLTEED 1166

Query: 62   LERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
             ++L+DFEE+CVE YF EK+ K    ++ERIR T ERVE ++ +++++  + N    S+Q
Sbjct: 1167 QKKLHDFEEQCVEMYFDEKDDKFNSGSEERIRVTFERVEQMSIQIKEVGDRVNYIKRSLQ 1226

Query: 122  VMSS 125
             + S
Sbjct: 1227 SLDS 1230

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1

 Score =  107 bits (267), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 81/124 (65%), Gaps = 4/124 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHIL-LFIKYLRRKCEGVRETYDNGLKLFLDKED 61
            VW +QR+  +M Y +KP LPPP IILSHI+ LF    +R+    ++   +G KLFL +ED
Sbjct: 1110 VWKYQRYHFIMAYHEKPVLPPPLIILSHIVSLFCCICKRR---KKDKTSDGPKLFLTEED 1166

Query: 62   LERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
             ++L+DFEE+CVE YF EK+ K    ++ERIR T ERVE +  +++++  + N    S+Q
Sbjct: 1167 QKKLHDFEEQCVEMYFNEKDDKFHSGSEERIRVTFERVEQMCIQIKEVGDRVNYIKRSLQ 1226

Query: 122  VMSS 125
             + S
Sbjct: 1227 SLDS 1230

Essential ion channel and serine/threonine-protein kinase. Divalent cation channel permeable to calcium and magnesium. Has a central role in magnesium ion homeostasis and in the regulation of anoxic neuronal cell death. The kinase activity is essential for the channel function. May be involved in a fundamental process that adjusts plasma membrane divalent cation fluxes according to the metabolic state of the cell. Phosphorylates annexin A1 (ANXA1).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8CIR4|TRPM6_MOUSE Transient receptor potential cation channel subfamily M member 6 OS=Mus musculus GN=Trpm6 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRK-CEGVRETYDNGLKLFLDKED 61
            +W + R+  +M Y QKP LPPPFI+L+H+ L ++ L  +     +E  D GLKL+L K+D
Sbjct: 1089 LWKYNRYRYIMTYHQKPWLPPPFILLNHLCLLLRGLCCRPAPQDQEEGDGGLKLYLTKDD 1148

Query: 62   LERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQK 112
            L++L+DFEE+CVE YF EK   L  S +E+IR T+ERV  +  +++++N+K
Sbjct: 1149 LKKLHDFEEQCVEKYFHEKTEGLNCSFEEQIRMTSERVSEMFFQLKEMNEK 1199

Essential ion channel and kinase. Crucial for magnesium homeostasis. Has an important role in epithelial magnesium transport and in the active magnesium absorption in the gut and kidney.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9BX84|TRPM6_HUMAN Transient receptor potential cation channel subfamily M member 6 OS=Homo sapiens GN=TRPM6 PE=1 SV=2

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 7/114 (6%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKC----EGVRETYDNGLKLFLD 58
            +W + R+  +M Y +KP LPPP I+LSH+ L    LRR C       +E  D GLKL+L 
Sbjct: 1083 LWKYNRYRYIMTYHEKPWLPPPLILLSHVGLL---LRRLCCHRAPHDQEEGDVGLKLYLS 1139

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQK 112
            KEDL++L+DFEE+CVE YF EK   +  S +ERIR T+ERV  +  +++++N+K
Sbjct: 1140 KEDLKKLHDFEEQCVEKYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEK 1193

Essential ion channel and serine/threonine-protein kinase. Crucial for magnesium homeostasis. Has an important role in epithelial magnesium transport and in the active magnesium absorption in the gut and kidney. Isoforms of the type M6-kinase lack the ion channel region.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
328713852	1532	PREDICTED: transient receptor potential	0.451	0.078	0.702	3e-45
189239436	1605	PREDICTED: similar to AGAP006825-PA [Tri	0.384	0.064	0.714	4e-45
270011081	1413	hypothetical protein TcasGA2_TC009943 [T	0.384	0.072	0.714	4e-45
383856148	1739	PREDICTED: transient receptor potential	0.451	0.069	0.68	2e-44
170058438	1090	conserved hypothetical protein [Culex qu	0.365	0.089	0.680	1e-43
328777846	1719	PREDICTED: transient receptor potential	0.451	0.070	0.664	4e-43
350407764	1721	PREDICTED: transient receptor potential	0.451	0.070	0.664	4e-43
380023122	1719	PREDICTED: transient receptor potential	0.451	0.070	0.664	4e-43
340717253	1721	PREDICTED: transient receptor potential	0.451	0.070	0.664	4e-43
340717251	1685	PREDICTED: transient receptor potential	0.451	0.071	0.664	4e-43

>gi|328713852|ref|XP_003245193.1| PREDICTED: transient receptor potential cation channel CG34123-like [Acyrthosiphon pisum]

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 101/121 (83%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDL 62
            VWMFQRFTVVMEYEQKP+LPPP I   H+ L  KYL RK +G++ETYDNGLKLFL  E+L
Sbjct: 1086 VWMFQRFTVVMEYEQKPSLPPPLIFFCHVFLLAKYLCRKIQGIQETYDNGLKLFLGNEEL 1145

Query: 63   ERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQV 122
            E+LYDFEEECVEGYFREK+ K+ MS +ERI+ + E+ ENI QKV+DINQKEN QNSS+Q 
Sbjct: 1146 EQLYDFEEECVEGYFREKDYKVQMSMEERIKMSLEKTENIQQKVDDINQKENLQNSSVQA 1205

Query: 123  M 123
            +
Sbjct: 1206 L 1206

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239436|ref|XP_974857.2| PREDICTED: similar to AGAP006825-PA [Tribolium castaneum]

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/119 (71%), Positives = 101/119 (84%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDL 62
            VWMFQRFTVVMEYEQKP LPPPFII  HI L IKYLRRK EG  E+YDNGLKLFLD++++
Sbjct: 1024 VWMFQRFTVVMEYEQKPILPPPFIIFCHIYLLIKYLRRKMEGKEESYDNGLKLFLDRDEM 1083

Query: 63   ERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
            ERLYDFEE+CVEGYF E+E KL  ST+ERI+ TTER+E++ QK+EDIN KEN   +++Q
Sbjct: 1084 ERLYDFEEDCVEGYFAEQELKLQQSTEERIKVTTERIEHLTQKIEDINTKENIHTTALQ 1142

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011081|gb|EFA07529.1| hypothetical protein TcasGA2_TC009943 [Tribolium castaneum]

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/119 (71%), Positives = 101/119 (84%)

Query: 3   VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDL 62
           VWMFQRFTVVMEYEQKP LPPPFII  HI L IKYLRRK EG  E+YDNGLKLFLD++++
Sbjct: 832 VWMFQRFTVVMEYEQKPILPPPFIIFCHIYLLIKYLRRKMEGKEESYDNGLKLFLDRDEM 891

Query: 63  ERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
           ERLYDFEE+CVEGYF E+E KL  ST+ERI+ TTER+E++ QK+EDIN KEN   +++Q
Sbjct: 892 ERLYDFEEDCVEGYFAEQELKLQQSTEERIKVTTERIEHLTQKIEDINTKENIHTTALQ 950

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856148|ref|XP_003703572.1| PREDICTED: transient receptor potential cation channel trpm-like [Megachile rotundata]

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 104/125 (83%), Gaps = 4/125 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCE----GVRETYDNGLKLFLD 58
            VWMFQRFTVVMEYEQKP LPPP I++ HI L +KYL R          ETYDNGLKLFL+
Sbjct: 1190 VWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLLVKYLLRYVTQGKTSTGETYDNGLKLFLE 1249

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +D+ERLYDFEE+CVEGYFRE+E KL MST+ERI+ TTERVEN++QK+EDI++KEN+QN+
Sbjct: 1250 ADDMERLYDFEEDCVEGYFREQELKLQMSTEERIKVTTERVENMHQKIEDIDKKENTQNA 1309

Query: 119  SIQVM 123
            S+Q +
Sbjct: 1310 SLQAV 1314

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170058438|ref|XP_001864922.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877554|gb|EDS40937.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 100/119 (84%)

Query: 3   VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVRETYDNGLKLFLDKEDL 62
           VWMFQRFTVVMEY+QKP LPPP I   H   F+KY  RK +G++++ DNGLKLFL+KED+
Sbjct: 194 VWMFQRFTVVMEYQQKPVLPPPLIAFCHFYSFLKYCVRKAKGLQQSRDNGLKLFLEKEDM 253

Query: 63  ERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQ 121
           ERLYDFEEECVEGYFRE++  L  ST+ERI+NT ERVEN++QK+EDINQKEN Q +++Q
Sbjct: 254 ERLYDFEEECVEGYFREQDVLLQQSTEERIKNTDERVENMSQKIEDINQKENIQTATVQ 312

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777846|ref|XP_395849.4| PREDICTED: transient receptor potential cation channel CG34123 [Apis mellifera]

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 4/125 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVR----ETYDNGLKLFLD 58
            VWMFQRFTVVMEYEQKP LPPP I++ HI L +KYL R     +    ETYDNGLKLFL+
Sbjct: 1172 VWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLVVKYLLRYITQGKASSGETYDNGLKLFLE 1231

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +D+ERLYDFEE+CVEGYFRE+E KL MST+ER++ TTERVEN++ K+EDI++KEN+QN+
Sbjct: 1232 ADDMERLYDFEEDCVEGYFREQELKLQMSTEERVKITTERVENMHSKIEDIDKKENTQNA 1291

Query: 119  SIQVM 123
            S+Q +
Sbjct: 1292 SLQAV 1296

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407764|ref|XP_003488186.1| PREDICTED: transient receptor potential cation channel CG34123-like [Bombus impatiens]

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 4/125 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVR----ETYDNGLKLFLD 58
            VWMFQRFTVVMEYEQKP LPPP I++ HI L +KYL R     +    ETYDNGLKLFL+
Sbjct: 1171 VWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLVVKYLLRYVTQGKANTGETYDNGLKLFLE 1230

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +D+ERLYDFEE+CVEGYFRE+E KL MST+ER++ TTERVEN++ K+EDI++KEN+QN+
Sbjct: 1231 ADDMERLYDFEEDCVEGYFREQELKLQMSTEERVKITTERVENMHSKIEDIDKKENTQNA 1290

Query: 119  SIQVM 123
            S+Q +
Sbjct: 1291 SLQAV 1295

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023122|ref|XP_003695376.1| PREDICTED: transient receptor potential cation channel trpm-like [Apis florea]

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 4/125 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVR----ETYDNGLKLFLD 58
            VWMFQRFTVVMEYEQKP LPPP I++ HI L +KYL R     +    ETYDNGLKLFL+
Sbjct: 1172 VWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLVVKYLLRYITQGKASSGETYDNGLKLFLE 1231

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +D+ERLYDFEE+CVEGYFRE+E KL MST+ER++ TTERVEN++ K+EDI++KEN+QN+
Sbjct: 1232 ADDMERLYDFEEDCVEGYFREQELKLQMSTEERVKITTERVENMHSKIEDIDKKENTQNA 1291

Query: 119  SIQVM 123
            S+Q +
Sbjct: 1292 SLQAV 1296

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717253|ref|XP_003397100.1| PREDICTED: transient receptor potential cation channel CG34123-like isoform 2 [Bombus terrestris]

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 4/125 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVR----ETYDNGLKLFLD 58
            VWMFQRFTVVMEYEQKP LPPP I++ HI L +KYL R     +    ETYDNGLKLFL+
Sbjct: 1171 VWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLVVKYLLRYVTQGKANTGETYDNGLKLFLE 1230

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +D+ERLYDFEE+CVEGYFRE+E KL MST+ER++ TTERVEN++ K+EDI++KEN+QN+
Sbjct: 1231 ADDMERLYDFEEDCVEGYFREQELKLQMSTEERVKITTERVENMHSKIEDIDKKENTQNA 1290

Query: 119  SIQVM 123
            S+Q +
Sbjct: 1291 SLQAV 1295

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717251|ref|XP_003397099.1| PREDICTED: transient receptor potential cation channel CG34123-like isoform 1 [Bombus terrestris]

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 104/125 (83%), Gaps = 4/125 (3%)

Query: 3    VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEGVR----ETYDNGLKLFLD 58
            VWMFQRFTVVMEYEQKP LPPP I++ HI L +KYL R     +    ETYDNGLKLFL+
Sbjct: 1135 VWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLVVKYLLRYVTQGKANTGETYDNGLKLFLE 1194

Query: 59   KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +D+ERLYDFEE+CVEGYFRE+E KL MST+ER++ TTERVEN++ K+EDI++KEN+QN+
Sbjct: 1195 ADDMERLYDFEEDCVEGYFREQELKLQMSTEERVKITTERVENMHSKIEDIDKKENTQNA 1254

Query: 119  SIQVM 123
            S+Q +
Sbjct: 1255 SLQAV 1259

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
MGI|MGI:1330305	1622	Trpm1 "transient receptor pote	0.537	0.088	0.447	1.4e-29
UNIPROTKB|F1SNR3	1648	TRPM1 "Uncharacterized protein	0.537	0.087	0.434	1.1e-28
UNIPROTKB|H0YKU7	1390	TRPM1 "Transient receptor pote	0.537	0.103	0.447	1.1e-28
UNIPROTKB|Q7Z4N2	1603	TRPM1 "Transient receptor pote	0.537	0.089	0.447	1.3e-28
UNIPROTKB|F8W865	1625	TRPM1 "Transient receptor pote	0.537	0.088	0.447	1.3e-28
RGD|1597140	1628	Trpm1 "transient receptor pote	0.537	0.088	0.440	1.3e-28
UNIPROTKB|Q2WEA5	1628	Trpm1 "Transient receptor pote	0.537	0.088	0.440	1.3e-28
UNIPROTKB|D9IDV3	1642	TRPM1 "Transient receptor pote	0.537	0.087	0.447	1.4e-28
UNIPROTKB|F1MPU3	1644	TRPM1 "Uncharacterized protein	0.537	0.087	0.434	1.7e-28
UNIPROTKB|F1PRL9	1647	TRPM1 "Uncharacterized protein	0.541	0.088	0.464	1.7e-28

MGI|MGI:1330305 Trpm1 "transient receptor potential cation channel, subfamily M, member 1" [Mus musculus (taxid:10090)]

 Score = 335 (123.0 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 68/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L    R+K EG +E  D GLKLFL 
Sbjct:  1134 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1193

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L++L++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++EN   +
Sbjct:  1194 DEELKKLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKT 1253

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR + +   +  +   LE + G
Sbjct:  1254 SLQTVD----LRLSQLEELSGRMVSALENLAG 1281

GO:0005216 "ion channel activity" evidence=IEA

GO:0005261 "cation channel activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0007165 "signal transduction" evidence=IGI

GO:0007601 "visual perception" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IDA

GO:0046548 "retinal rod cell development" evidence=IMP

GO:0050896 "response to stimulus" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0071482 "cellular response to light stimulus" evidence=ISO;IMP

UNIPROTKB|F1SNR3 TRPM1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 334 (122.6 bits), Expect = 1.1e-28, P = 1.1e-28
 Identities = 66/152 (43%), Positives = 103/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKC----EGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L R+C    EG ++  D GLKLFL 
Sbjct:  1128 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSRRCRKKREGDQDEQDRGLKLFLS 1187

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
             +E+L+RL++FEE+CV  +F+EKE +   S++ERIR T ERVEN++ ++E+IN++EN   +
Sbjct:  1188 EEELKRLHEFEEQCVREHFQEKEDEQQSSSEERIRVTCERVENMSMRLEEINERENFMKT 1247

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR + +   ++ + + LE + G
Sbjct:  1248 SLQTVD----LRLSQLEELSNRMVNALENLAG 1275

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

UNIPROTKB|H0YKU7 TRPM1 "Transient receptor potential cation channel subfamily M member 1" [Homo sapiens (taxid:9606)]

 Score = 333 (122.3 bits), Expect = 1.1e-28, P = 1.1e-28
 Identities = 68/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L    R+K EG +E  D GLKLFL 
Sbjct:  1089 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1148

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L+RL++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++E    +
Sbjct:  1149 DEELKRLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKT 1208

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR   +   ++ + + LE + G
Sbjct:  1209 SLQTVD----LRLAQLEELSNRMVNALENLAG 1236

GO:0016021 "integral to membrane" evidence=IEA

GO:0005261 "cation channel activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0071482 "cellular response to light stimulus" evidence=IEA

UNIPROTKB|Q7Z4N2 TRPM1 "Transient receptor potential cation channel subfamily M member 1" [Homo sapiens (taxid:9606)]

 Score = 333 (122.3 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 68/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L    R+K EG +E  D GLKLFL 
Sbjct:  1089 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1148

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L+RL++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++E    +
Sbjct:  1149 DEELKRLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKT 1208

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR   +   ++ + + LE + G
Sbjct:  1209 SLQTVD----LRLAQLEELSNRMVNALENLAG 1236

GO:0007165 "signal transduction" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0007601 "visual perception" evidence=IMP

GO:0071482 "cellular response to light stimulus" evidence=IMP

GO:0006810 "transport" evidence=TAS

GO:0005262 "calcium channel activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0070588 "calcium ion transmembrane transport" evidence=TAS

UNIPROTKB|F8W865 TRPM1 "Transient receptor potential cation channel subfamily M member 1" [Homo sapiens (taxid:9606)]

 Score = 333 (122.3 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 68/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L    R+K EG +E  D GLKLFL 
Sbjct:  1111 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1170

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L+RL++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++E    +
Sbjct:  1171 DEELKRLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKT 1230

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR   +   ++ + + LE + G
Sbjct:  1231 SLQTVD----LRLAQLEELSNRMVNALENLAG 1258

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1597140 Trpm1 "transient receptor potential cation channel, subfamily M, member 1" [Rattus norvegicus (taxid:10116)]

 Score = 333 (122.3 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 67/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + +  L    R+K EG +E  D GLKLFL 
Sbjct:  1140 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIVMRLSGRCRKKREGDQEERDRGLKLFLS 1199

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L++L++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++EN   +
Sbjct:  1200 DEELKKLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKA 1259

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR + +   +  +   LE + G
Sbjct:  1260 SLQTVD----LRLSQLEELSGRMVGALENLAG 1287

GO:0005216 "ion channel activity" evidence=IEA

GO:0005261 "cation channel activity" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0007601 "visual perception" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0035841 "new growing cell tip" evidence=ISO

GO:0046548 "retinal rod cell development" evidence=ISO

GO:0071482 "cellular response to light stimulus" evidence=ISO

UNIPROTKB|Q2WEA5 Trpm1 "Transient receptor potential cation channel subfamily M member 1" [Rattus norvegicus (taxid:10116)]

 Score = 333 (122.3 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 67/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + +  L    R+K EG +E  D GLKLFL 
Sbjct:  1140 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIVMRLSGRCRKKREGDQEERDRGLKLFLS 1199

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L++L++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++EN   +
Sbjct:  1200 DEELKKLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKA 1259

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR + +   +  +   LE + G
Sbjct:  1260 SLQTVD----LRLSQLEELSGRMVGALENLAG 1287

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|D9IDV3 TRPM1 "Transient receptor potential melastatin family isoform 1 splice variant" [Homo sapiens (taxid:9606)]

 Score = 333 (122.3 bits), Expect = 1.4e-28, P = 1.4e-28
 Identities = 68/152 (44%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L    R+K EG +E  D GLKLFL 
Sbjct:  1128 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLS 1187

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L+RL++FEE+CV+ +FREKE +   S+DERIR T+ERVEN++ ++E+IN++E    +
Sbjct:  1188 DEELKRLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKT 1247

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR   +   ++ + + LE + G
Sbjct:  1248 SLQTVD----LRLAQLEELSNRMVNALENLAG 1275

GO:0005216 "ion channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MPU3 TRPM1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 332 (121.9 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 66/152 (43%), Positives = 102/152 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKC----EGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L R+C    EG ++  D GLKLFL 
Sbjct:  1127 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSRRCRKKREGDQDEQDRGLKLFLS 1186

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L+RL++FEE+CV  +F+EKE +   S++ERIR T ERVEN++ ++E+IN++EN   +
Sbjct:  1187 DEELKRLHEFEEQCVREHFQEKEDEQQSSSEERIRVTCERVENMSMRLEEINERENFMKT 1246

Query:   119 SIQVMSSLAFLRTTLVAFWNSGITDELETVCG 150
             S+Q +     LR + +   ++ + + LE + G
Sbjct:  1247 SLQTVD----LRLSQLEELSNRMVNALENLAG 1274

GO:0071482 "cellular response to light stimulus" evidence=IEA

GO:0046548 "retinal rod cell development" evidence=IEA

GO:0035841 "new growing cell tip" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005261 "cation channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PRL9 TRPM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 332 (121.9 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 73/157 (46%), Positives = 106/157 (67%)

Query:     3 VWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYL----RRKCEGVRETYDNGLKLFLD 58
             VW FQR+ ++M +  +P LPPP IILSHI + I  L    R+K EG ++  D GLKLFL 
Sbjct:  1135 VWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQDEQDRGLKLFLS 1194

Query:    59 KEDLERLYDFEEECVEGYFREKETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNS 118
              E+L+RL++FEE+CV+ +F+EKE +   S+DERIR T ERVEN++ ++E+IN++EN   +
Sbjct:  1195 DEELKRLHEFEEQCVQEHFQEKEDEQQSSSDERIRVTCERVENMSMRLEEINERENFMKT 1254

Query:   119 SIQV----MSSLAFLRTTLV-AFWN-SGI--TDELET 147
             S+Q     +S L  L   +V A  N +GI  TD ++T
Sbjct:  1255 SLQTVDLRLSQLEELSNRMVNALENLAGIDRTDLIQT 1291

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	268
KOG3614|consensus	1381		100.0
TIGR00870	743	trp transient-receptor-potential calcium channel p	96.58

>KOG3614|consensus

Probab=100.00  E-value=1.3e-35  Score=311.62  Aligned_cols=148  Identities=40%  Similarity=0.700  Sum_probs=140.7

Q ss_pred             ccccccchhhhHhhhcCCCCCCCchhhhHHHHHHHHHHhhccC--CcccccCcccccCCHHHHHHhhhHHHHHHHHHHHH
Q psy16996          2 YVWMFQRFTVVMEYEQKPALPPPFIILSHILLFIKYLRRKCEG--VRETYDNGLKLFLDKEDLERLYDFEEECVEGYFRE   79 (268)
Q Consensus         2 qIWKFQRY~LImEYhsRP~LPPPFIIiSHIyLLiK~l~rkc~~--k~~~~d~~LKLfLs~dE~kKLhdFEE~CvEnYLre   79 (268)
                      +|||||||+||||||+||+||||||||||+|+++|++++++++  ++...+.++|+||++++++|||+||++|||+|+++
T Consensus      1051 ~iWkFQRY~limeyh~rP~LPPPfiilsHi~l~~~r~~~~~~~~~~~~~~~~~~klfls~e~~~kl~~fEe~~vE~~~r~ 1130 (1381)
T KOG3614|consen 1051 QIWKFQRYSLIMEYHSRPALPPPFIILSHIYLLLKRLSNSFRGDKRARDKDESLKLFLSKEENKKLHTFEEVCVENFLRK 1130 (1381)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHcccCcccccchhhhhhHhhCCHHHHhhhhHHHHHHHHHHHHH
Confidence            6999999999999999999999999999999999999988764  33445678999999999999999999999999999


Q ss_pred             HHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhHhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcccC
Q psy16996         80 KETKLAMSTDERIRNTTERVENINQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETVCGLLS  153 (268)
Q Consensus        80 ke~~k~~S~EERIR~TseRVE~M~~qL~EI~Eke~~ik~sL~~Ld~l~~~r~~~~~~~~~~i~~~le~v~g~~~  153 (268)
                      ++.++++|++||||+|++|||.|+++|.|+++++.++|+++++++    .|++-+.+....+.+.|+...++.+
T Consensus      1131 ~~~~~~~s~~Erir~t~~rvd~~~~~l~e~~~r~~~lk~~v~~~~----~~l~~~~~~~~~~~~~lk~~~~~~~ 1200 (1381)
T KOG3614|consen 1131 REMEQNSSTEERIRRTANRVDLILNRLIELEQREKTLKDSVQNSE----TRLASVLQFSEEYVNILKILVNMVS 1200 (1381)
T ss_pred             HHHHhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhHHHHhhcccc
Confidence            999999999999999999999999999999999999999999999    9999999999999999999988886

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=96.58  E-value=0.00082  Score=68.34  Aligned_cols=37  Identities=35%  Similarity=0.635  Sum_probs=31.9

Q ss_pred             ccccccchhhhHhhhc-CCCCCCCchhhhHHHHHHHHH
Q psy16996          2 YVWMFQRFTVVMEYEQ-KPALPPPFIILSHILLFIKYL   38 (268)
Q Consensus         2 qIWKFQRY~LImEYhs-RP~LPPPFIIiSHIyLLiK~l   38 (268)
                      +.|||||+.++++|+. .|++||||.+++|.-.+++.+
T Consensus       624 ~~wk~~r~~~~~~y~~~~~~~p~P~~~~~~~~~~~~~~  661 (743)
T TIGR00870       624 EEWKFQRAKLWMSYEREGGTCPPPFNIIPGPKSFVGLF  661 (743)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCceeccchHHHHHHH
Confidence            4799999999999985 599999999999987765443

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	268
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
3e7k_A	56	TRPM7 channel; coiled-coil, antiparallel, ION chan	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 5e-06
 Identities = 50/339 (14%), Positives = 97/339 (28%), Gaps = 113/339 (33%)

Query: 2   YVWMFQRFTVVMEYEQKPALPPPFIILSHILL------FIKY----------LRRKCEGV 45
           Y ++        E  Q P++     I     L      F KY          LR+    +
Sbjct: 91  YKFLMSPIKT--EQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 46  RETYDNGLKLFLD------KEDL--ERLYDFEEECVE---------GYFREKETKLAM-- 86
           R        + +D      K  +  +    ++ +C                 ET L M  
Sbjct: 148 R----PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 87  -----------STDERIRNTTERVENINQKVEDINQKENSQNS--------SIQVMSSLA 127
                      S  +   N   R+ +I  ++  + + +  +N         + +  ++  
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263

Query: 128 FLRTTLVAFWNSGITD----------ELETVCGLLSPPRSPRLLSPPV---PGEIPPPSA 174
                L+      +TD           L+     L+P     LL   +   P ++P    
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-EV 322

Query: 175 ISGGPTARNFRRCRHASEMSNPEMAVYLEKEHLRDAEESDYHLMEEIIHTRFNN-KEAGS 233
           ++  P                    + +  E +RD                ++N K    
Sbjct: 323 LTTNP------------------RRLSIIAESIRDG------------LATWDNWKH--V 350

Query: 234 DADKFDNNAFFLTVNEETASEIRANFKKNSLF----NIP 268
           + DK        ++N    +E R  F + S+F    +IP
Sbjct: 351 NCDKL-TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 8e-05
 Identities = 39/263 (14%), Positives = 71/263 (26%), Gaps = 72/263 (27%)

Query: 48  TYDNGLKLFL-----DKEDLERLYDFEEECVEGYFREKETKLAMST-DERIRNTTERVEN 101
           T D    L L       +DL R     E               +S   E IR+     +N
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPR-----EVL-------TTNPRRLSIIAESIRDGLATWDN 346

Query: 102 INQKVEDINQKENSQNSSIQVMS---------SLAFLR-------TTLVAFWNSGITDEL 145
                 + ++      SS+ V+           L+            L   W   I  ++
Sbjct: 347 WKH--VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404

Query: 146 ETVCGLL---------SPPRSPRL------LSPPVPGEIPPPSAISGGPTARNFRRCRHA 190
             V   L             +  +      L   +  E     +I       N  +   +
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV---DHYNIPKTFDS 461

Query: 191 SEMSNPEMAVYLEKE---HLRDAEES-----------DYHLMEE-IIHTRFNNKEAGSDA 235
            ++  P +  Y       HL++ E             D+  +E+ I H       +GS  
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521

Query: 236 DKFDNNAF---FLTVNEETASEI 255
           +      F   ++  N+     +
Sbjct: 522 NTLQQLKFYKPYICDNDPKYERL 544

>3e7k_A TRPM7 channel; coiled-coil, antiparallel, ION channel, assembly domain, Trp channel, membrane protein; 2.01A {Rattus norvegicus} Length = 56

 Score = 39.6 bits (92), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 90  ERIRNTTERVENINQKVEDINQKENSQNSSIQVMSS 125
              R T ERVE ++ +++++  + N    S+Q + S
Sbjct: 2   AGSRVTFERVEQMSIQIKEVGDRVNYIKRSLQSLDS 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	268
3e7k_A	56	TRPM7 channel; coiled-coil, antiparallel, ION chan	99.39

>3e7k_A TRPM7 channel; coiled-coil, antiparallel, ION channel, assembly domain, Trp channel, membrane protein; 2.01A {Rattus norvegicus}

Probab=99.39  E-value=6.8e-13  Score=96.47  Aligned_cols=53  Identities=23%  Similarity=0.292  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHhhhhhHhhhhhhhhHHHHHHHHHhhhhHHHHHhh
Q psy16996         92 IRNTTERVENINQKVEDINQKENSQNSSIQVMSSLAFLRTTLVAFWNSGITDELETV  148 (268)
Q Consensus        92 IR~TseRVE~M~~qL~EI~Eke~~ik~sL~~Ld~l~~~r~~~~~~~~~~i~~~le~v  148 (268)
                      ||+|++||++|+.+|+|++|||+|||+||++||    .|+.+|+++++.+.|.|+.+
T Consensus         4 iRvT~eRve~m~~~l~Evnekv~~ik~sL~~LD----~~lg~Lqdlsal~v~tLk~l   56 (56)
T 3e7k_A            4 SRVTFERVEQMSIQIKEVGDRVNYIKRSLQSLD----SQIGHLQDLSALTVDTLKTL   56 (56)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHC-
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999999999    99999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00