Psyllid ID: psy17051

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDYGAWAWA
Secondary Structure (PSIPRED)
cccccHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEEccccccccccccccEEEEEEEEEEcHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHccccccHHHHccccccccccccccccccccEEEEEEEEccHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccEEEEEEEEEEcHHHHHHHHHHHHHcccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MADPSREDEQVTLLGEEglraggqtlklgsspplswggpgvphfnRFVAGVALRERMPAFERMLWRACRGnvflrqaeietpledinsgdpvyKSVFIIFFQGDQLKTRVMKICEGfratlypcpeaptdrremsmgvttridddygawawa
Flexible Loop (DISEMBL)
madpsredEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIetpledinsgdpVYKSVFIIFFQGDQLKTRVMKICEGFratlypcpeaptdrremsmgvTTRIDDDYGAWAWA
Low Complexity Region (SEG)
MADPSREDEQVTLLGEEGLRAGGQTlklgsspplswggpgVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDYGAWAWA
Disordered region (IsUnstruct)
**********************************SWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCP************VTTRIDDDYGAWAW*
Disordered Region (DISOPRED)
*********************************************RFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPE**************RIDDDYGAWA**
Disordered Region (DISEMBL)
**********VTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDYGAWAWA
Disordered Region (DISPRO)
***************************************GVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDYGAWAWA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDYGAWAWA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q9Z1G4	839	V-type proton ATPase 116	yes	N/A	0.703	0.127	0.747	8e-44
Q8AVM5	831	V-type proton ATPase 116	N/A	N/A	0.828	0.151	0.604	8e-42
Q5R422	837	V-type proton ATPase 116	yes	N/A	0.828	0.150	0.611	1e-41
Q29466	838	V-type proton ATPase 116	yes	N/A	0.703	0.127	0.747	2e-41
Q9I8D0	838	V-type proton ATPase 116	yes	N/A	0.703	0.127	0.747	3e-41
P25286	838	V-type proton ATPase 116	yes	N/A	0.703	0.127	0.747	3e-41
Q93050	837	V-type proton ATPase 116	yes	N/A	0.703	0.127	0.747	3e-41
A1A5G6	837	V-type proton ATPase 116	yes	N/A	0.703	0.127	0.738	4e-41
P30628	905	Probable V-type proton AT	yes	N/A	0.644	0.108	0.744	4e-39
Q9HBG4	840	V-type proton ATPase 116	no	N/A	0.644	0.116	0.551	3e-31

>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=3

 Score =  175 bits (444), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 80/107 (74%), Positives = 87/107 (81%)

Query: 38  GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
           G G P    FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVF
Sbjct: 168 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 227

Query: 98  IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 228 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 274

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.
Mus musculus (taxid: 10090)

>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1

 Score =  169 bits (427), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 87/144 (60%), Positives = 100/144 (69%), Gaps = 18/144 (12%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADP   +E  TLL         +  ++G   PL  G         FVAGV  RER+P F
Sbjct: 142 MADPDLLEESSTLL---------EPSEMGRGAPLRLG---------FVAGVINRERIPTF 183

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWR CRGNVFLRQA+IE PLED  +GD V+KSVFIIFFQGDQLK RV KICEGFRA+
Sbjct: 184 ERMLWRVCRGNVFLRQAQIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEGFRAS 243

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPE P +R+EM+ GV TRI+D
Sbjct: 244 LYPCPETPQERKEMATGVNTRIED 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Xenopus laevis (taxid: 8355)

>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1

 Score =  168 bits (425), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/144 (61%), Positives = 99/144 (68%), Gaps = 18/144 (12%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADP    E  +LL         +  ++G   PL  G         FVAGV  RER+P F
Sbjct: 142 MADPDLLGESSSLL---------EPSEMGRGTPLRLG---------FVAGVINRERIPTF 183

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQLK RV KICEGFRA+
Sbjct: 184 ERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEGFRAS 243

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPE P +R+EM+ GV TRIDD
Sbjct: 244 LYPCPETPQERKEMASGVNTRIDD 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Pongo abelii (taxid: 9601)

>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 87/107 (81%)

Query: 38  GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
           G G P    FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVF
Sbjct: 161 GRGTPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220

Query: 98  IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Bos taurus (taxid: 9913)

>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 87/107 (81%)

Query: 38  GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
           G G P    FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVF
Sbjct: 161 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220

Query: 98  IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Gallus gallus (taxid: 9031)

>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 87/107 (81%)

Query: 38  GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
           G G P    FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVF
Sbjct: 161 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220

Query: 98  IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Rattus norvegicus (taxid: 10116)

>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 87/107 (81%)

Query: 38  GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
           G G P    FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVF
Sbjct: 161 GRGTPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220

Query: 98  IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Homo sapiens (taxid: 9606)

>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1

 Score =  166 bits (421), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 87/107 (81%)

Query: 38  GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
           G G P    FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVF
Sbjct: 161 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDSVHKSVF 220

Query: 98  IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRI+D
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMATGVNTRIED 267

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Xenopus tropicalis (taxid: 8364)

>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3

 Score =  159 bits (403), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 83/98 (84%)

Query: 47  FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
           FVAGV  RER+PAFER+LWRACRGNVFLR +EI+  L D  +GDPV K VFIIFFQGD L
Sbjct: 206 FVAGVIQRERLPAFERLLWRACRGNVFLRTSEIDDVLNDTVTGDPVNKCVFIIFFQGDHL 265

Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           KT+V KICEGFRATLYPCP+ P +RREMS+GV TRI+D
Sbjct: 266 KTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIED 303

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=2

 Score =  134 bits (336), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/98 (55%), Positives = 77/98 (78%)

Query: 47  FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
           F+AGV  RERM +FER+LWR CRGNV+L+ +E++ PLED  + + + K++FIIF+QG+QL
Sbjct: 172 FIAGVINRERMASFERLLWRICRGNVYLKFSEMDAPLEDPVTKEEIQKNIFIIFYQGEQL 231

Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
           + ++ KIC+GFRAT+YPCPE   +RREM   V  R++D
Sbjct: 232 RQKIKKICDGFRATVYPCPEPAVERREMLESVNVRLED 269

Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
91076248	833	PREDICTED: similar to vacuolar proton AT	0.835	0.152	0.791	2e-57
383855338	828	PREDICTED: V-type proton ATPase 116 kDa	0.835	0.153	0.791	2e-57
242003711	833	vacuolar proton translocating ATPase 116	0.835	0.152	0.791	2e-57
156548598	839	PREDICTED: V-type proton ATPase 116 kDa	0.835	0.151	0.784	3e-57
350401726	839	PREDICTED: V-type proton ATPase 116 kDa	0.835	0.151	0.784	3e-57
328777195	614	PREDICTED: v-type proton ATPase 116 kDa	0.835	0.206	0.784	4e-57
328711129	848	PREDICTED: v-type proton ATPase 116 kDa	0.835	0.149	0.770	1e-56
193636530	836	PREDICTED: v-type proton ATPase 116 kDa	0.835	0.151	0.770	1e-56
5852166	841	vacuolar ATPase subunit a [Manduca sexta	0.835	0.151	0.770	7e-56
307213911	894	Vacuolar proton translocating ATPase 116	0.947	0.161	0.672	5e-55

>gi|91076248|ref|XP_966700.1| PREDICTED: similar to vacuolar proton ATPase [Tribolium castaneum]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+EQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 142 MADPSREEEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 184

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD VYKSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 185 ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVYKSVFIIFFQGDQLKTRVKKICEGFRAT 244

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP DRREM+MGV TRI+D
Sbjct: 245 LYPCPEAPGDRREMAMGVMTRIED 268

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855338|ref|XP_003703171.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Megachile rotundata]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+EQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 142 MADPSREEEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 184

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 185 ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVFKSVFIIFFQGDQLKTRVKKICEGFRAT 244

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP DRREMSMGV TRI+D
Sbjct: 245 LYPCPEAPADRREMSMGVMTRIED 268

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003711|ref|XP_002422831.1| vacuolar proton translocating ATPase 116 kDa subunit A isoform, putative [Pediculus humanus corporis] gi|212505701|gb|EEB10093.1| vacuolar proton translocating ATPase 116 kDa subunit A isoform, putative [Pediculus humanus corporis]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+E VTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 142 MADPSREEESVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERVPAF 184

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED +SGD V+KSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 185 ERMLWRACRGNVFLRQAEIETPLEDPSSGDQVFKSVFIIFFQGDQLKTRVKKICEGFRAT 244

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAPTDRREM+MGV TRI+D
Sbjct: 245 LYPCPEAPTDRREMAMGVMTRIED 268

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548598|ref|XP_001607798.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Nasonia vitripennis]

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+EQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 142 MADPSREEEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 184

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 185 ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVHKSVFIIFFQGDQLKTRVKKICEGFRAT 244

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP DRREM+MGV TRI+D
Sbjct: 245 LYPCPEAPADRREMAMGVMTRIED 268

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401726|ref|XP_003486241.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 2 [Bombus impatiens]

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+EQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 142 MADPSREEEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 184

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 185 ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVFKSVFIIFFQGDQLKTRVKKICEGFRAT 244

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP DRREM+MGV TRI+D
Sbjct: 245 LYPCPEAPADRREMAMGVMTRIED 268

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777195|ref|XP_001123336.2| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like [Apis mellifera]

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+EQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 1   MADPSREEEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 43

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 44  ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVFKSVFIIFFQGDQLKTRVKKICEGFRAT 103

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP DRREM+MGV TRI+D
Sbjct: 104 LYPCPEAPADRREMAMGVMTRIED 127

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328711129|ref|XP_001951560.2| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Acyrthosiphon pisum]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/144 (77%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADP+REDEQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 154 MADPNREDEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 196

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLK+RV KICEGFRAT
Sbjct: 197 ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVHKSVFIIFFQGDQLKSRVRKICEGFRAT 256

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP+ RREM+MGV TRI+D
Sbjct: 257 LYPCPEAPSQRREMAMGVMTRIED 280

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193636530|ref|XP_001951582.1| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like isoform 2 [Acyrthosiphon pisum]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/144 (77%), Positives = 120/144 (83%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADP+REDEQVTLLGEEGLRAGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 142 MADPNREDEQVTLLGEEGLRAGGQALKLG-----------------FVAGVILRERIPAF 184

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEIETPLED ++GD V+KSVFIIFFQGDQLK+RV KICEGFRAT
Sbjct: 185 ERMLWRACRGNVFLRQAEIETPLEDPSTGDQVHKSVFIIFFQGDQLKSRVRKICEGFRAT 244

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPEAP+ RREM+MGV TRI+D
Sbjct: 245 LYPCPEAPSQRREMAMGVMTRIED 268

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|5852166|emb|CAB55500.1| vacuolar ATPase subunit a [Manduca sexta]

 Score =  221 bits (563), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 111/144 (77%), Positives = 118/144 (81%), Gaps = 17/144 (11%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
           MADPSRE+EQVTLLGEEGL AGGQ LKLG                 FVAGV LRER+PAF
Sbjct: 143 MADPSREEEQVTLLGEEGLMAGGQALKLG-----------------FVAGVILRERIPAF 185

Query: 61  ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
           ERMLWRACRGNVFLRQAEI+TPLED +S D VYKSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct: 186 ERMLWRACRGNVFLRQAEIDTPLEDPSSSDQVYKSVFIIFFQGDQLKTRVKKICEGFRAT 245

Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
           LYPCPE+P DRREM+MGV TRI+D
Sbjct: 246 LYPCPESPADRREMAMGVMTRIED 269

Source: Manduca sexta

Species: Manduca sexta

Genus: Manduca

Family: Sphingidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213911|gb|EFN89158.1| Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 [Harpegnathos saltator]

 Score =  218 bits (556), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 117/174 (67%), Positives = 125/174 (71%), Gaps = 30/174 (17%)

Query: 1   MADPSREDEQVTLLGEEGLRAGGQTLKLGSS------------------PPLSWGGPGVP 42
           MADPSRE+EQVTLLGEEGLRAGGQ LKLG +                  P  S     + 
Sbjct: 151 MADPSREEEQVTLLGEEGLRAGGQALKLGVANVVVSCLLCRQQEHAGLNPTESMTRALIS 210

Query: 43  HFNR------------FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGD 90
             N             FVAGV LRER+PAFERMLWRACRGNVFLRQAEIETPLED ++GD
Sbjct: 211 DDNIARQSALGPVQLGFVAGVILRERIPAFERMLWRACRGNVFLRQAEIETPLEDPSTGD 270

Query: 91  PVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
            VYKSVFIIFFQGDQLKTRV KICEGFRATLYPCPEAP DRREM+MGV TRI+D
Sbjct: 271 QVYKSVFIIFFQGDQLKTRVKKICEGFRATLYPCPEAPADRREMAMGVMTRIED 324

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
FB|FBgn0028671	855	Vha100-1 "Vacuolar H[+] ATPase	0.848	0.150	0.701	2.8e-44
ZFIN|ZDB-GENE-030131-3027	834	atp6v0a1a "ATPase, H+ transpor	0.644	0.117	0.775	1.1e-37
UNIPROTKB|B7Z641	788	ATP6V0A1 "cDNA FLJ54439, highl	0.644	0.124	0.785	3.9e-37
UNIPROTKB|B7Z2A9	794	ATP6V0A1 "V-type proton ATPase	0.644	0.123	0.785	4e-37
UNIPROTKB|F1PVS8	801	ATP6V0A1 "Uncharacterized prot	0.644	0.122	0.785	4.1e-37
UNIPROTKB|F1NLH4	802	ATP6V0A1 "V-type proton ATPase	0.644	0.122	0.785	4.1e-37
UNIPROTKB|E1C8Q5	808	ATP6V0A1 "V-type proton ATPase	0.644	0.121	0.785	4.2e-37
UNIPROTKB|F1MH43	832	LOC785923 "Uncharacterized pro	0.644	0.117	0.785	4.6e-37
UNIPROTKB|F1S1D6	832	LOC100523018 "Uncharacterized	0.644	0.117	0.785	4.6e-37
UNIPROTKB|F5H569	837	ATP6V0A1 "V-type proton ATPase	0.644	0.117	0.785	4.7e-37

FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)]

 Score = 474 (171.9 bits), Expect = 2.8e-44, P = 2.8e-44
 Identities = 101/144 (70%), Positives = 107/144 (74%)

Query:     1 MADPSREDEQVTLLGEEGLRAGGQTXXXXXXXXXXXXXXXVPHFNRFVAGVALRERMPAF 60
             MAD   EDEQ  LLGEEG+RA  Q                      FVAGV LRER+PAF
Sbjct:   164 MADNQNEDEQAQLLGEEGVRAS-QPGQNLKLG--------------FVAGVILRERLPAF 208

Query:    61 ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
             ERMLWRACRGNVFLRQA IETPLED  +GD V+KSVFIIFFQGDQLKTRV KICEGFRAT
Sbjct:   209 ERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRVKKICEGFRAT 268

Query:   121 LYPCPEAPTDRREMSMGVTTRIDD 144
             LYPCPEAP DRREM+MGV TRI+D
Sbjct:   269 LYPCPEAPADRREMAMGVMTRIED 292

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=ISS

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0045202 "synapse" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0051452 "intracellular pH reduction" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0048388 "endosomal lumen acidification" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0009881 "photoreceptor activity" evidence=IMP

ZFIN|ZDB-GENE-030131-3027 atp6v0a1a "ATPase, H+ transporting, lysosomal V0 subunit a isoform 1a" [Danio rerio (taxid:7955)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
 Identities = 76/98 (77%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQA+IE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVIGRERIPTFERMLWRVCRGNVFLRQADIEDPLEDPATGDNVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMAAGVNTRIDD 267

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0001845 "phagolysosome assembly" evidence=IMP

GO:0000046 "autophagic vacuole fusion" evidence=IMP

UNIPROTKB|B7Z641 ATP6V0A1 "cDNA FLJ54439, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 407 (148.3 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   127 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 186

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   187 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 224

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|B7Z2A9 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 407 (148.3 bits), Expect = 4.0e-37, P = 4.0e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   127 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 186

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   187 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 224

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|F1PVS8 ATP6V0A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 407 (148.3 bits), Expect = 4.1e-37, P = 4.1e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F1NLH4 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Gallus gallus (taxid:9031)]

 Score = 407 (148.3 bits), Expect = 4.1e-37, P = 4.1e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

UNIPROTKB|E1C8Q5 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Gallus gallus (taxid:9031)]

 Score = 407 (148.3 bits), Expect = 4.2e-37, P = 4.2e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

UNIPROTKB|F1MH43 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 407 (148.3 bits), Expect = 4.6e-37, P = 4.6e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F1S1D6 LOC100523018 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 407 (148.3 bits), Expect = 4.6e-37, P = 4.6e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F5H569 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 407 (148.3 bits), Expect = 4.7e-37, P = 4.7e-37
 Identities = 77/98 (78%), Positives = 84/98 (85%)

Query:    47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
             FVAGV  RER+P FERMLWR CRGNVFLRQAEIE PLED  +GD V+KSVFIIFFQGDQL
Sbjct:   170 FVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQL 229

Query:   107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             K RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct:   230 KNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93050	VPP1_HUMAN	No assigned EC number	0.7476	0.7039	0.1278	yes	N/A
Q29466	VPP1_BOVIN	No assigned EC number	0.7476	0.7039	0.1276	yes	N/A
P25286	VPP1_RAT	No assigned EC number	0.7476	0.7039	0.1276	yes	N/A
Q9I8D0	VPP1_CHICK	No assigned EC number	0.7476	0.7039	0.1276	yes	N/A
A1A5G6	VPP1_XENTR	No assigned EC number	0.7383	0.7039	0.1278	yes	N/A
P30628	VPP1_CAEEL	No assigned EC number	0.7448	0.6447	0.1082	yes	N/A
Q9Z1G4	VPP1_MOUSE	No assigned EC number	0.7476	0.7039	0.1275	yes	N/A
Q5R422	VPP1_PONAB	No assigned EC number	0.6111	0.8289	0.1505	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
pfam01496	707	pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni	1e-28

>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family

 Score =  109 bits (274), Expect = 1e-28
 Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 8/98 (8%)

Query: 47  FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
           FVAGV  RE++ AFER LWRACRG  ++RQAEIE PLED        K+VFIIFF G + 
Sbjct: 144 FVAGVINREKLEAFERELWRACRG--YIRQAEIEEPLEDPK------KTVFIIFFVGKED 195

Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             +V KI + F   LY  PE   +R E+   V  RI++
Sbjct: 196 LDKVKKILDSFGFELYDVPETEGERSELISKVNKRIEE 233

This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG2189|consensus	829		100.0
PF01496	759	V_ATPase_I: V-type ATPase 116kDa subunit family ;	99.71
PRK05771	646	V-type ATP synthase subunit I; Validated	96.55
COG1269	660	NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E	96.11

>KOG2189|consensus

Probab=100.00  E-value=5.2e-37  Score=280.73  Aligned_cols=111  Identities=59%  Similarity=0.997  Sum_probs=106.6

Q ss_pred             CCCcccceeeeeeeCCChhHHHHHHHHhhcCcEEEEeeecCCcccCCCCCCCceeEEEEEEEechhHHHHHHHHHHhcCC
Q psy17051         40 GVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRA  119 (152)
Q Consensus        40 ~~~~~l~~iaGvI~~~k~~~FeR~LwR~tRGN~~~~~~~i~~~l~Dp~tge~v~K~VFiVff~G~~l~~KI~KICdsf~a  119 (152)
                      ....+++||||||+++|..+|||||||+||||+|+++.+||+|+.||+|||+++|+||||||||+++++||+||||||||
T Consensus       168 ~~~~~l~FvaGvI~r~k~~~fER~LWRa~Rgn~f~r~~~ie~~l~dp~Tge~~~K~vFivF~~Geql~~kIkKIcd~f~a  247 (829)
T KOG2189|consen  168 FDGLKLGFVAGVINREKVFAFERMLWRACRGNLFIRQSDIEEPLEDPKTGEPVEKNVFIVFFQGEQLKQKIKKICDGFGA  247 (829)
T ss_pred             CCcccceeEEeeechhHHHHHHHHHHHHhccceEEEeecccccccCCccCCcceeEEEEEEeecHHHHHHHHHHHhccCc
Confidence            33346669999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceecCCCChHHHHHHHHHHHhHHHHHHHhhh
Q psy17051        120 TLYPCPEAPTDRREMSMGVTTRIDDDYGAWA  150 (152)
Q Consensus       120 ~iy~~p~~~~~r~~~l~eL~~~i~dl~~~~~  150 (152)
                      ++||||+++++|++++.+++.||+||+.||.
T Consensus       248 ~~yp~p~~~~er~~~~~~v~~ri~DL~~Vl~  278 (829)
T KOG2189|consen  248 TLYPCPESPEERKEMLLEVNTRISDLQTVLD  278 (829)
T ss_pred             EeecCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999985

>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.71  E-value=5.8e-18  Score=157.19  Aligned_cols=108  Identities=38%  Similarity=0.592  Sum_probs=70.6

Q ss_pred             CCcccceeeeeeeCCChhHHHHHHHHhhcCcEEEEeeecCCcccCCCCCCCceeEEEEEEEechhHHHHHHHHHHhcCCc
Q psy17051         41 VPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT  120 (152)
Q Consensus        41 ~~~~l~~iaGvI~~~k~~~FeR~LwR~tRGN~~~~~~~i~~~l~Dp~tge~v~K~VFiVff~G~~l~~KI~KICdsf~a~  120 (152)
                      +..+++|++|+|++++..+|+|+|||++|||+|+++.+++++..|+.  +.+.|+||+|+++|+...+||+|||+++|++
T Consensus       139 ~~~~~~f~~G~I~~~~~~~f~~~l~r~~~~N~fi~~~~Ie~~~~d~~--e~~~k~v~vv~~~~~~~~~kv~~il~~~~f~  216 (759)
T PF01496_consen  139 KFLNLGFIAGVIPREKIESFERILWRATRGNIFIRFSEIEEILEDPK--EEVEKEVFVVFFSGKELEEKVKKILRSFGFE  216 (759)
T ss_dssp             -------------HHHHHHHHHHHHHHHTT-----S------EEEE---EE-SSSEEEEEEEEGGGHHHHHHHHHTTT--
T ss_pred             cceeeeEEEEEEehhhHHHHHHHHHHhccCCeEEEEEeeeccccccc--ceeeeeeEEEEEEchhhHHHHHHHhhccCce
Confidence            44556689999999999999999999999999999999999888875  7788999999999999999999999999999


Q ss_pred             eecCCCChHHHHHHHHHHHhHHHHHHHhhh
Q psy17051        121 LYPCPEAPTDRREMSMGVTTRIDDDYGAWA  150 (152)
Q Consensus       121 iy~~p~~~~~r~~~l~eL~~~i~dl~~~~~  150 (152)
                      .|++|+....+.+.+++++++|+|++.+++
T Consensus       217 ~~~~p~~~~~p~e~~~~l~~~i~~l~~~~~  246 (759)
T PF01496_consen  217 RYDLPEDEGTPEEAIKELEEEIEELEKELE  246 (759)
T ss_dssp             B----GGGGG-HHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence            999999877888999999999999998765

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents the 116kDa subunit (or subunit a) and subunit I found in the V0 or A0 complex of V- or A-ATPases, respectively. The 116kDa subunit is a transmembrane glycoprotein required for the assembly and proton transport activity of the ATPase complex. Several isoforms of the 116kDa subunit exist, providing a potential role in the differential targeting and regulation of the V-ATPase for specific organelles []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033177 proton-transporting two-sector ATPase complex, proton-transporting domain; PDB: 2RPW_X 2NVJ_A 2JTW_A 3RRK_A.

>PRK05771 V-type ATP synthase subunit I; Validated

Probab=96.55  E-value=0.0052  Score=56.84  Aligned_cols=89  Identities=7%  Similarity=0.060  Sum_probs=61.4

Q ss_pred             ccceeeeeeeCCChhHHHHHHHHhhcCcEEEEeeecCCcccCCCCCCCceeEEEEEEEechhHHHHHHHHHHhcCCceec
Q psy17051         44 FNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYP  123 (152)
Q Consensus        44 ~l~~iaGvI~~~k~~~FeR~LwR~tRGN~~~~~~~i~~~l~Dp~tge~v~K~VFiVff~G~~l~~KI~KICdsf~a~iy~  123 (152)
                      .+....|+|+.+....   +  ...-...++...            ....+.+|+|++......+++.+||+++++..++
T Consensus       144 ~~~~~~G~i~~~~~~~---~--~~~~~~~~~~~~------------~~~~~~~~~vvv~~~~~~~~~~~~l~~~~f~~~~  206 (646)
T PRK05771        144 YVSVFVGTVPEDKLEE---L--KLESDVENVEYI------------STDKGYVYVVVVVLKELSDEVEEELKKLGFERLE  206 (646)
T ss_pred             cEEEEEEEecchhhhh---H--HhhccCceEEEE------------EecCCcEEEEEEEEhhhHHHHHHHHHHCCCEEec
Confidence            5668899999877544   1  111111121111            1225667777777778889999999999999999


Q ss_pred             CCCChHHHHHHHHHHHhHHHHHHHhhh
Q psy17051        124 CPEAPTDRREMSMGVTTRIDDDYGAWA  150 (152)
Q Consensus       124 ~p~~~~~r~~~l~eL~~~i~dl~~~~~  150 (152)
                      +|+ .....+.+++++++++++++.++
T Consensus       207 ~p~-~~~p~~~l~~l~~~l~~l~~~~~  232 (646)
T PRK05771        207 LEE-EGTPSELIREIKEELEEIEKERE  232 (646)
T ss_pred             CCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            987 45556778888888888776654

>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]

Probab=96.11  E-value=0.0026  Score=59.39  Aligned_cols=100  Identities=21%  Similarity=0.175  Sum_probs=78.1

Q ss_pred             eeeeeeeCCChhHHHHHHHHhhcCcEEEEeeecCCcccCCCCCCCceeEEEEEEEechhHHHHHHHHHHhcCCceecCCC
Q psy17051         47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPE  126 (152)
Q Consensus        47 ~iaGvI~~~k~~~FeR~LwR~tRGN~~~~~~~i~~~l~Dp~tge~v~K~VFiVff~G~~l~~KI~KICdsf~a~iy~~p~  126 (152)
                      +..+.+...+...-..-+||..++++++...+.....+    ++...+.+++|+.++.....++.+++++.+.++++.|+
T Consensus       147 ~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~v~~  222 (660)
T COG1269         147 FDLSLLRGLKFLLVRLGLVRREKLEALVGVIEDEVALY----GENVEASVVIVVAHGAEDLDKVSKILNELGFELYEVPE  222 (660)
T ss_pred             hhhHhhcccceEEEEeeeehhhhhhHHHhhcccccchh----hhccccceEEEEEecccchHHHHHHHHhCCcEEeeccc
Confidence            66666777777777777788998888877666543321    15567999999999999999999999999999999997


Q ss_pred             ChHHHHHHHHHHHhHHHHHHHhhh
Q psy17051        127 APTDRREMSMGVTTRIDDDYGAWA  150 (152)
Q Consensus       127 ~~~~r~~~l~eL~~~i~dl~~~~~  150 (152)
                      ......+.+.+++.+++|.+..++
T Consensus       223 ~~~~~~~~~~~~~~~i~~~~~~~~  246 (660)
T COG1269         223 FDGGPSELISELEEVIAEIQDELE  246 (660)
T ss_pred             cCCChHHHHHHHHHHHHHHHHHHH
Confidence            665566777788888777776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	6e-06

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357

 Score = 43.6 bits (102), Expect = 6e-06
 Identities = 16/112 (14%), Positives = 29/112 (25%), Gaps = 11/112 (9%)

Query: 33  PLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPV 92
            L+ G    P        VA  E + A  + L  A      L    +E  L         
Sbjct: 137 ALAHGLDESPRLGVIPFLVAKPEELEAVRKALQEALADRFVLEAEPLENQL--------- 187

Query: 93  YKSVFIIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
             +  ++  + +    R      G     +P         + +  +  R   
Sbjct: 188 --AALVVVKRSELEAARSSLSRLGLAELRFPGAYGAMPLGKAAARMKERARL 237

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	99.23

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}

Probab=99.23  E-value=3.4e-11  Score=101.02  Aligned_cols=97  Identities=8%  Similarity=-0.048  Sum_probs=79.2

Q ss_pred             CCcccceeeeee-eCCChhHHHHHHHHhhcCcEEEEeeecCCcccCCCCCCCceeEEEEEEEechhHHHHHHHHHHhcCC
Q psy17051         41 VPHFNRFVAGVA-LRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRA  119 (152)
Q Consensus        41 ~~~~l~~iaGvI-~~~k~~~FeR~LwR~tRGN~~~~~~~i~~~l~Dp~tge~v~K~VFiVff~G~~l~~KI~KICdsf~a  119 (152)
                      ....+.+++|+| +++....|++.|||+++|..+...            ++...+++|+||++ .....||+|||+++|+
T Consensus       144 ~~~~~g~~~g~ip~~~~~~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~vv~~~-~~~~~~v~~il~s~~f  210 (357)
T 3rrk_A          144 ESPRLGVIPFLVAKPEELEAVRKALQEALADRFVLEA------------EPLENQLAALVVVK-RSELEAARSSLSRLGL  210 (357)
T ss_dssp             TCTTEEEEEEEESCHHHHHHHHHHHHHHHTTSCEEEE------------EECSSSEEEEEEEE-GGGHHHHHHHHHTTTC
T ss_pred             ccceeeeeeEEecChhhHHHHHHHHHHhcCCeEEEEe------------ecCCCcEEEEEEEE-HHHHHHHHHHHHHCCC
Confidence            445677999999 899999999999999999443222            11236789999997 5578899999999999


Q ss_pred             ceecCCCChH--HHHHHHHHHHhHHHHHHHhhh
Q psy17051        120 TLYPCPEAPT--DRREMSMGVTTRIDDDYGAWA  150 (152)
Q Consensus       120 ~iy~~p~~~~--~r~~~l~eL~~~i~dl~~~~~  150 (152)
                      +.|++|+...  .+.+.+.+++.+|++++..++
T Consensus       211 ~~~~~p~~~~~~~p~~~l~~l~~~i~~l~~~l~  243 (357)
T 3rrk_A          211 AELRFPGAYGAMPLGKAAARMKERARLAPEELV  243 (357)
T ss_dssp             CBCCCCGGGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999997666  777889999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00