Psyllid ID: psy17078

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------
Protein Sequence
MKKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEccEEEEEcccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEccccHHccHHHHHHHHHHHHHHcccHHHHccccccEEEEccccEEcHHHHHHHHc
Coil and Loop (DISEMBL)
mkkkfktgipmeaTSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Flexible Loop (DISEMBL)
mkkkfktgipmeatsnlvalkkDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Low Complexity Region (SEG)
MKKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Disordered region (IsUnstruct)
****************LVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEI**
Disordered Region (DISOPRED)
**KKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Disordered Region (DISEMBL)
********IPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Disordered Region (DISPRO)
***KFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	68	2.2.26 [Sep-21-2011]
Q0GA42	951	Metal transporter CNNM1 O	yes	N/A	0.705	0.050	0.520	3e-08
Q9NRU3	951	Metal transporter CNNM1 O	yes	N/A	0.705	0.050	0.520	3e-08
Q9H8M5	875	Metal transporter CNNM2 O	no	N/A	0.705	0.054	0.541	7e-08
Q3TWN3	875	Metal transporter CNNM2 O	no	N/A	0.705	0.054	0.541	8e-08
Q5U2P1	875	Metal transporter CNNM2 O	no	N/A	0.705	0.054	0.541	8e-08
Q6P4Q7	775	Metal transporter CNNM4 O	no	N/A	0.705	0.061	0.520	1e-07
A0JPA0	769	Metal transporter CNNM4 O	no	N/A	0.838	0.074	0.403	1e-07
P0C588	772	Metal transporter CNNM4 O	no	N/A	0.705	0.062	0.520	1e-07
Q69ZF7	771	Metal transporter CNNM4 O	no	N/A	0.705	0.062	0.520	1e-07
Q12296	706	Protein MAM3 OS=Saccharom	yes	N/A	0.985	0.094	0.373	4e-06

>sp|Q0GA42|CNNM1_MOUSE Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 PE=1 SV=5

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct: 410 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 457

Probable metal transporter.
Mus musculus (taxid: 10090)

>sp|Q9NRU3|CNNM1_HUMAN Metal transporter CNNM1 OS=Homo sapiens GN=CNNM1 PE=2 SV=3

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct: 410 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 457

Probable metal transporter.

Homo sapiens (taxid: 9606)

>sp|Q9H8M5|CNNM2_HUMAN Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 PE=1 SV=2

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+NII GALE+  K VE++MT L DC+M+  E IL+F  +SEI+
Sbjct: 427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474

Divalent metal cation transporter. Mediates transport of divalent metal cations in an order of Mg(2+) > Co(2+) > Mn(2+) > Sr(2+) > Ba(2+) > Cu(2+) > Fe(2+).

Homo sapiens (taxid: 9606)

>sp|Q3TWN3|CNNM2_MOUSE Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 PE=1 SV=3

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+NII GALE+  K VE++MT L DC+M+  E IL+F  +SEI+
Sbjct: 427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474

Divalent metal cation transporter. Mediates transport of divalent metal cations in an order of Mg(2+) > Co(2+) > Mn(2+) > Sr(2+) > Ba(2+) > Cu(2+) > Fe(2+).

Mus musculus (taxid: 10090)

>sp|Q5U2P1|CNNM2_RAT Metal transporter CNNM2 OS=Rattus norvegicus GN=Cnnm2 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+NII GALE+  K VE++MT L DC+M+  E IL+F  +SEI+
Sbjct: 427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474

Divalent metal cation transporter. Mediates transport of divalent metal cations in an order of Mg(2+) > Co(2+) > Mn(2+) > Sr(2+) > Ba(2+) > Cu(2+) > Fe(2+).

Rattus norvegicus (taxid: 10116)

>sp|Q6P4Q7|CNNM4_HUMAN Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 PE=1 SV=3

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+N+I GALE+  K VE+IMT+L DC+M+  + IL+F  +SEI+
Sbjct: 354 LVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIM 401

Probable metal transporter. The interaction with the metal ion chaperone COX11 suggests that it may play a role in sensory neuron functions (By similarity). May play a role in biomineralization and retinal function.

Homo sapiens (taxid: 9606)

>sp|A0JPA0|CNNM4_XENTR Metal transporter CNNM4 OS=Xenopus tropicalis GN=cnnm4 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 40/57 (70%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++ T     + ++E+NII GALE+  K VE++MTK++DC+ML  + +L+F  +S I+
Sbjct: 342 LKVTEPYSGIVREEMNIIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIM 398

Probable metal transporter.

Xenopus tropicalis (taxid: 8364)

>sp|P0C588|CNNM4_RAT Metal transporter CNNM4 OS=Rattus norvegicus GN=Cnnm4 PE=1 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+N+I GALE+  K VE+IMT+L DC+M+  + IL+F  +SEI+
Sbjct: 352 LVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIM 399

Probable metal transporter. The interaction with the metal ion chaperone COX11 suggests that it may play a role in sensory neuron functions. May play a role in biomineralization and retinal function.

Rattus norvegicus (taxid: 10116)

>sp|Q69ZF7|CNNM4_MOUSE Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L K+E+N+I GALE+  K VE+IMT+L DC+M+  + IL+F  +SEI+
Sbjct: 351 LVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIM 398

Probable metal transporter. The interaction with the metal ion chaperone COX11 suggests that it may play a role in sensory neuron functions (By similarity). May play a role in biomineralization and retinal function.

Mus musculus (taxid: 10090)

>sp|Q12296|MAM3_YEAST Protein MAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM3 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query: 2   KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT 61
           K   KT + +  T  +  L KDEV IIS  L++  K+VEEIMT +++ + +  +TIL+  
Sbjct: 218 KSGLKTLVTLHRTMGVERLTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDK 277

Query: 62  VISEIVN 68
            + +I N
Sbjct: 278 TVEKIFN 284

Involved in metal homeostasis and more specially in manganese sensitivity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	68
405973540	1096	Metal transporter CNNM2 [Crassostrea gig	0.838	0.052	0.526	5e-10
328720335	986	PREDICTED: metal transporter CNNM2-like	0.705	0.048	0.645	2e-09
328720337	950	PREDICTED: metal transporter CNNM2-like	0.705	0.050	0.645	3e-09
328720333	931	PREDICTED: metal transporter CNNM2-like	0.705	0.051	0.645	3e-09
357621730	962	ancient conserved domain protein 2 [Dana	0.838	0.059	0.543	1e-08
347967171	854	AGAP002094-PA [Anopheles gambiae str. PE	0.838	0.066	0.491	2e-08
242021399	834	conserved hypothetical protein [Pediculu	0.705	0.057	0.604	3e-08
260817760	800	hypothetical protein BRAFLDRAFT_86581 [B	0.838	0.071	0.508	3e-08
350403868	950	PREDICTED: metal transporter CNNM2-like	0.838	0.06	0.508	5e-08
170073576	553	MAM3 [Culex quinquefasciatus] gi|1678702	0.838	0.103	0.456	5e-08

>gi|405973540|gb|EKC38248.1| Metal transporter CNNM2 [Crassostrea gigas]

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 45/57 (78%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++ T     LK DEVNIISGAL++++K V+E+MTK++D YMLDI ++L+F  +SEI+
Sbjct: 597 VKVTKEFNDLKNDEVNIISGALDLSKKSVKEVMTKIEDVYMLDINSVLDFETVSEIM 653

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|328720335|ref|XP_001945496.2| PREDICTED: metal transporter CNNM2-like isoform 1 [Acyrthosiphon pisum]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 41/48 (85%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L+KDEVNIISGALE+ +KKV ++MTKL+D YML  +TIL+F  +SEI+
Sbjct: 511 LEKDEVNIISGALELHRKKVGDVMTKLEDVYMLSYDTILDFETVSEIM 558

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720337|ref|XP_003247005.1| PREDICTED: metal transporter CNNM2-like isoform 3 [Acyrthosiphon pisum]

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 41/48 (85%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L+KDEVNIISGALE+ +KKV ++MTKL+D YML  +TIL+F  +SEI+
Sbjct: 511 LEKDEVNIISGALELHRKKVGDVMTKLEDVYMLSYDTILDFETVSEIM 558

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720333|ref|XP_003247004.1| PREDICTED: metal transporter CNNM2-like isoform 2 [Acyrthosiphon pisum]

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 41/48 (85%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           L+KDEVNIISGALE+ +KKV ++MTKL+D YML  +TIL+F  +SEI+
Sbjct: 511 LEKDEVNIISGALELHRKKVGDVMTKLEDVYMLSYDTILDFETVSEIM 558

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357621730|gb|EHJ73464.1| ancient conserved domain protein 2 [Danaus plexippus]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 46/57 (80%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++ T+++  L KDEVNIISGALE+ +KKV ++MTKL+D +ML I ++L+F  +SEIV
Sbjct: 581 VKVTTDVNDLDKDEVNIISGALELRKKKVSDVMTKLEDVFMLPITSVLDFETMSEIV 637

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967171|ref|XP_320945.5| AGAP002094-PA [Anopheles gambiae str. PEST] gi|333469727|gb|EAA01004.5| AGAP002094-PA [Anopheles gambiae str. PEST]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 45/57 (78%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++ T ++  L KDEVN+ISG LE+ +KKVE++MT+L+D YML ++ +++F  ISEI+
Sbjct: 362 VQVTKDVNDLDKDEVNVISGVLELRKKKVEDVMTRLEDAYMLPMDAVMDFETISEIM 418

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242021399|ref|XP_002431132.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516381|gb|EEB18394.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 39/48 (81%)

Query: 20  LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++KDEVNIISGALE+ +K V E+MTKL+D YMLD   IL+F  +S+I+
Sbjct: 318 IEKDEVNIISGALELRKKNVAEVMTKLEDVYMLDYNAILDFETVSDIM 365

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260817760|ref|XP_002603753.1| hypothetical protein BRAFLDRAFT_86581 [Branchiostoma floridae] gi|229289076|gb|EEN59764.1| hypothetical protein BRAFLDRAFT_86581 [Branchiostoma floridae]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 40/57 (70%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           M+       ++K E+NIISGALE+ QK V +IMT  + C+MLDIE IL+F  +SEI+
Sbjct: 233 MKMQHQFQEIEKHEINIISGALELRQKTVTDIMTPSEQCFMLDIEAILDFDTMSEIM 289

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350403868|ref|XP_003486930.1| PREDICTED: metal transporter CNNM2-like [Bombus impatiens]

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 44/57 (77%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++ T+    L+KDEVNII+GALE+ +K V+++MTK++D YMLD   IL+F  +SEI+
Sbjct: 430 VKVTTGYNDLEKDEVNIIAGALELRKKTVKDVMTKIEDVYMLDYNAILDFETVSEIM 486

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170073576|ref|XP_001870397.1| MAM3 [Culex quinquefasciatus] gi|167870221|gb|EDS33604.1| MAM3 [Culex quinquefasciatus]

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 46/57 (80%)

Query: 11  MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
           ++ T+++  L KDEVN+ISG LE+ +K VE++MT+++D +MLD++ +L+F  I+EI+
Sbjct: 77  VKVTTDINDLDKDEVNVISGVLELRKKTVEDVMTRIEDAFMLDLDAVLDFETITEIM 133

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	68
FB|FBgn0262124	834	uex "unextended" [Drosophila m	0.852	0.069	0.448	1.3e-08
UNIPROTKB|F1ND49	598	CNNM2 "Uncharacterized protein	0.705	0.080	0.520	7.4e-08
RGD|1308728	878	Cnnm1 "cyclin M1" [Rattus norv	0.705	0.054	0.520	1.2e-07
UNIPROTKB|F1MD84	941	CNNM1 "Uncharacterized protein	0.705	0.051	0.520	1.4e-07
UNIPROTKB|Q6P4Q7	775	CNNM4 "Metal transporter CNNM4	0.705	0.061	0.520	1.4e-07
UNIPROTKB|F1PMJ7	948	CNNM1 "Uncharacterized protein	0.705	0.050	0.520	1.4e-07
UNIPROTKB|F1S8W6	949	CNNM1 "Uncharacterized protein	0.705	0.050	0.520	1.4e-07
UNIPROTKB|Q9NRU3	951	CNNM1 "Metal transporter CNNM1	0.705	0.050	0.520	1.4e-07
MGI|MGI:1891366	951	Cnnm1 "cyclin M1" [Mus musculu	0.705	0.050	0.520	1.4e-07
UNIPROTKB|F1S849	827	CNNM2 "Uncharacterized protein	0.705	0.058	0.541	1.5e-07

FB|FBgn0262124 uex "unextended" [Drosophila melanogaster (taxid:7227)]

 Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 26/58 (44%), Positives = 44/58 (75%)

Query:    11 MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN 68
             +  T+++  L K+EVNIISGALE+ +K V ++MT ++D +ML ++ +L+F  +SEI+N
Sbjct:   348 VRVTNDVNDLDKNEVNIISGALELRKKTVADVMTHINDAFMLSLDALLDFETVSEIMN 405

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0006873 "cellular ion homeostasis" evidence=ISS

UNIPROTKB|F1ND49 CNNM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 7.4e-08, P = 7.4e-08
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VE++MT L DC+M+  E +L+F  +SEI+
Sbjct:   150 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMIAAEAVLDFNTMSEIM 197

GO:0010960 "magnesium ion homeostasis" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

RGD|1308728 Cnnm1 "cyclin M1" [Rattus norvegicus (taxid:10116)]

 Score = 133 (51.9 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct:   339 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 386

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1MD84 CNNM1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct:   409 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 456

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|Q6P4Q7 CNNM4 "Metal transporter CNNM4" [Homo sapiens (taxid:9606)]

 Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+N+I GALE+  K VE+IMT+L DC+M+  + IL+F  +SEI+
Sbjct:   354 LVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIM 401

GO:0006811 "ion transport" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0050896 "response to stimulus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1PMJ7 CNNM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct:   407 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 454

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1S8W6 CNNM1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct:   408 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 455

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|Q9NRU3 CNNM1 "Metal transporter CNNM1" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct:   410 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 457

GO:0006811 "ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

MGI|MGI:1891366 Cnnm1 "cyclin M1" [Mus musculus (taxid:10090)]

 Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VEE++T L DC+ML  + +L+F  +SEI+
Sbjct:   410 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 457

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1S849 CNNM2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 132 (51.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query:    20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
             L K+E+NII GALE+  K VE++MT L DC+M+  E IL+F  +SEI+
Sbjct:   427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0010960 "magnesium ion homeostasis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0GA42	CNNM1_MOUSE	No assigned EC number	0.5208	0.7058	0.0504	yes	N/A
Q9NRU3	CNNM1_HUMAN	No assigned EC number	0.5208	0.7058	0.0504	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	68
PRK11573	413	hypothetical protein; Provisional	99.19
TIGR03520	408	GldE gliding motility-associated protein GldE. Mem	99.16
PRK15094	292	magnesium/cobalt efflux protein CorC; Provisional	99.12
KOG2118|consensus	498		99.06
COG1253	429	TlyC Hemolysins and related proteins containing CB	99.03
COG4536	423	CorB Putative Mg2+ and Co2+ transporter CorB [Inor	98.91
COG4535	293	CorC Putative Mg2+ and Co2+ transporter CorC [Inor	98.25
TIGR00400	449	mgtE Mg2+ transporter (mgtE). This family of proka	94.58

>PRK11573 hypothetical protein; Provisional

Probab=99.19  E-value=1.4e-11  Score=90.62  Aligned_cols=60  Identities=13%  Similarity=0.338  Sum_probs=50.4

Q ss_pred             hhhhcccceecccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHHHHHHh
Q psy17078          2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEI   66 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~t~~~I   66 (68)
                      ++||+.+++.+.    +.++++|++||+|+|+|++++|+||||||.+|++++.+++++ +.+..+
T Consensus       156 ~eEl~~lv~~~~----~~l~~~e~~mi~~vl~l~~~~v~eiMtPr~~i~~l~~~~~~~-e~~~~~  215 (413)
T PRK11573        156 KEELRTIVHESR----SQISRRNQDMLLSVLDLEKVTVDDIMVPRNEIVGIDINDDWK-SILRQL  215 (413)
T ss_pred             HHHHHHHHHHHh----hhcCHHHHHHHHHHhccCCCChhhcCCccceEEEEECCCCHH-HHHHHH
Confidence            468888887543    259999999999999999999999999999999999999984 444443

>TIGR03520 GldE gliding motility-associated protein GldE

Probab=99.16  E-value=2.4e-11  Score=89.15  Aligned_cols=61  Identities=21%  Similarity=0.393  Sum_probs=50.6

Q ss_pred             hhhhcccceecccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHHHHHHh
Q psy17078          2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEI   66 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~t~~~I   66 (68)
                      +.|++.+++..  .++| +.++|++||+|+|+|++++|+||||||.+|++++.+++++ +.++.+
T Consensus       159 ~eEl~~lv~~~--~~~g-~~~~E~~~i~~vl~l~~~~v~diMtpr~~v~~l~~~~~~~-e~~~~~  219 (408)
T TIGR03520       159 VDQLSQALELT--DEED-TTKEEQKILQGIVSFGNTDTKQVMRPRLDIFALDIETSFS-EIIPKI  219 (408)
T ss_pred             HHHHHHHHHhH--hhcC-CChHHHHHHHHHhccCCCEeeeeCCchHhEEEEECCCCHH-HHHHHH
Confidence            46788888754  3345 6899999999999999999999999999999999999984 454444

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldC is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. GldE was discovered because of its adjacency to GldD in F. johnsonii. Overexpression of GldE partially supresses the effects of a GldB point mutant suggesting that GldB and GldE interact. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Not all Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility and in fact some do not appear to express the gliding phenotype.

>PRK15094 magnesium/cobalt efflux protein CorC; Provisional

Probab=99.12  E-value=3.2e-11  Score=85.38  Aligned_cols=58  Identities=14%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             hhhhcccceecccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078          2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      +.||+.|+..  +.++|.|+++|+.||+|+|+|++++|++|||||.++++++.++++.+.
T Consensus        34 ~eEl~~l~~~--~~~~g~l~~~e~~~i~~vl~l~~~~V~diMtpr~~i~~l~~~~sl~e~   91 (292)
T PRK15094         34 RDELLALIRD--SEQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDEC   91 (292)
T ss_pred             HHHHHHHHHh--HhhcCCCCHHHHHHHHHHhccCCCEEeEEccchHHEEEEeCCCCHHHH
Confidence            4688888874  345688999999999999999999999999999999999999998753

>KOG2118|consensus

Probab=99.06  E-value=3e-11  Score=91.25  Aligned_cols=66  Identities=35%  Similarity=0.499  Sum_probs=61.9

Q ss_pred             hhhhcccceecccCCC-ccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHHHHHHhh
Q psy17078          2 KKKFKTGIPMEATSNL-VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV   67 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~-g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~t~~~I~   67 (68)
                      .+++++||.+|..... |.+..+|..|+.|+++|.+++|+|||||++++|+++.+..++.+++.+|.
T Consensus       168 ~~~l~~lv~~~~~e~~~g~~~~~e~~ii~g~l~l~ek~~~evmtpi~~~f~l~~n~~l~~~~~~~i~  234 (498)
T KOG2118|consen  168 RASLLALVQLVGNEAGKGDLTYDELTIITGALELTEKLVGEVMTPIEDVFALDANTKLDRETVGEIV  234 (498)
T ss_pred             hHHHHHHHHHHhcccccCcccchhhhHhhhhHHHHHHHHHHhccchhhheeeccccccchHHHhhHh
Confidence            3689999999988666 89999999999999999999999999999999999999999999998875

>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only]

Probab=99.03  E-value=2.3e-10  Score=84.19  Aligned_cols=46  Identities=26%  Similarity=0.436  Sum_probs=41.5

Q ss_pred             ccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCC
Q psy17078         13 ATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETIL   58 (68)
Q Consensus        13 ~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l   58 (68)
                      .+.+.|.++++|+.||+|+|+|++++|++|||||.+|++++.+.+.
T Consensus       182 ~~~~~g~~~~~E~~mi~~v~~l~~~~v~eiMtPR~~i~~l~~~~~~  227 (429)
T COG1253         182 ESAEEGVLEEEEREMINNVLDLDDRTVREIMTPRTDIVALDLTDTV  227 (429)
T ss_pred             hHHhcCCcCHHHHHHHHHHhccCCcEeeeEeeecccEEEEcCCCCH
Confidence            3456899999999999999999999999999999999999995553

>COG4536 CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]

Probab=98.91  E-value=3.9e-10  Score=83.73  Aligned_cols=57  Identities=18%  Similarity=0.307  Sum_probs=50.0

Q ss_pred             hhhhcccceecccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078          2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +.||+..|+.+  +.+|...+++++||.|+|||.+.||.||||||.+|.++++|.+++.
T Consensus       167 ~EElR~~v~~~--~~e~~~~~~~rdmL~gvLDLe~~tV~DIMvpR~~i~~id~d~~~e~  223 (423)
T COG4536         167 KEELRTAVNES--GSEGSVNKIDRDMLLGVLDLENLTVSDIMVPRNEIIGIDIDDPWEE  223 (423)
T ss_pred             HHHHHHHHHHh--hcccccccccHHHHhcccccccceeeeeeccccceeeecCCCCHHH
Confidence            56888888855  4457777889999999999999999999999999999999998753

>COG4535 CorC Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]

Probab=98.25  E-value=1.7e-07  Score=66.83  Aligned_cols=50  Identities=14%  Similarity=0.302  Sum_probs=44.6

Q ss_pred             cccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         12 EATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        12 h~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      +.++.++-+.++.+.||.|++++++.+|+|||+||.++..|..+..+++=
T Consensus        42 Rdse~n~LiD~dt~~mlEGvm~iadl~vrDiMIPRSQM~~l~~~~~l~~~   91 (293)
T COG4535          42 RDSEQNELIDADTLDMLEGVMDIADLRVRDIMIPRSQMITLKRNQTLDEC   91 (293)
T ss_pred             HHhhhccccChhHHHHHHHHHHHHHhhHhhhcccHHHheeccccCCHHHH
Confidence            34556778999999999999999999999999999999999999887753

>TIGR00400 mgtE Mg2+ transporter (mgtE)

Probab=94.58  E-value=0.029  Score=41.78  Aligned_cols=41  Identities=17%  Similarity=0.146  Sum_probs=35.7

Q ss_pred             ccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        18 g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +.++++|++.+.+++++.+.+|+++|+  .++.+++.+.++.+
T Consensus       112 ~~l~~~er~~i~~ll~~~e~tvg~iMt--~~~~~v~~~~tv~e  152 (449)
T TIGR00400       112 ASSTEEERKAINLLLSYSDDSAGRIMT--IEYVELKEDYTVGK  152 (449)
T ss_pred             HcCCHHHHHHHHHHhCCCcchHHHhCc--CceEEECCCCcHHH
Confidence            468999999999999999999999999  47888888876654

This family of prokaryotic proteins models a class of Mg++ transporter first described in Bacillus firmus. May form a homodimer.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	68
3oi8_A	156	Uncharacterized protein; structural genomics, PSI-	98.85
3lhh_A	172	CBS domain protein; structural genomics, PSI-2, pr	98.71
3ocm_A	173	Putative membrane protein; structural genomics, PS	98.53
3lv9_A	148	Putative transporter; CBS domain, PSI, MCSG, struc	98.45
3oco_A	153	Hemolysin-like protein containing CBS domains; str	97.94
3t4n_C	323	Nuclear protein SNF4; CBS domain, nucleotide bindi	97.74
2qrd_G	334	Protein C1556.08C; AMPK, ADP, ATP-binding, kinase,	97.47
3kxr_A	205	Magnesium transporter, putative; cystathionine bet	96.98
3k6e_A	156	CBS domain protein; streptococcus pneumoniae TIGR4	96.61
2v8q_E	330	5'-AMP-activated protein kinase subunit gamma-1; p	96.45
3i8n_A	130	Uncharacterized protein VP2912; APC64273.1, vibrio	95.74
3jtf_A	129	Magnesium and cobalt efflux protein; CBS domain, C	95.03
2yvy_A	278	MGTE, Mg2+ transporter MGTE; membrane protein, tra	95.0
3lfr_A	136	Putative metal ION transporter; CBS, AMP, PSI, MCS	94.91
2zy9_A	473	Mg2+ transporter MGTE; membrane protien, metal tra	94.9
3hf7_A	130	Uncharacterized CBS-domain protein; CSB-domain PAI	94.8
3ctu_A	156	CBS domain protein; structural genomics, PSI-2, pr	94.22
3nqr_A	127	Magnesium and cobalt efflux protein CORC; structur	93.89
2oux_A	286	Magnesium transporter; 10001B, structural genomics	92.77
2emq_A	157	Hypothetical conserved protein; CBS domains, NPPSF	92.1
3k2v_A	149	Putative D-arabinose 5-phosphate isomerase; KPSF-l	88.28
1yav_A	159	Hypothetical protein BSU14130; cystathionine beta	88.06
3lqn_A	150	CBS domain protein; csgid, structural genomics, un	86.65
4gqw_A	152	CBS domain-containing protein CBSX1, chloroplasti;	85.96
3org_A	632	CMCLC; transporter, transport protein; 3.50A {Cyan	84.78
4esy_A	170	CBS domain containing membrane protein; structural	84.39

>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}

Probab=98.85  E-value=6.3e-10  Score=69.05  Aligned_cols=57  Identities=9%  Similarity=0.096  Sum_probs=50.9

Q ss_pred             hhhhcccceecccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078          2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      ..||+.|+....  ++|.++++|++++.++++|++.+|+++|+|+.++++++.++++..
T Consensus         5 ~~el~~li~~~~--~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~~   61 (156)
T 3oi8_A            5 AEDVLNLLRQAH--EQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIER   61 (156)
T ss_dssp             HHHHHHHHHHHH--HTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHHH
T ss_pred             HHHHHHHHHhHH--hcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHHH
Confidence            468899988543  468899999999999999999999999999999999999998764

>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}

Probab=98.71  E-value=2e-09  Score=67.88  Aligned_cols=58  Identities=12%  Similarity=0.292  Sum_probs=21.7

Q ss_pred             hhhhcccceecccCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078          2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus         2 k~elk~Lv~lh~~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ..||++|+...  ...|.++++|++++.++++|++.+|+++|+|+.++++++.++++...
T Consensus         9 ~~el~~l~~~~--~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a   66 (172)
T 3lhh_A            9 QEDIQAMLQEG--SSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDAN   66 (172)
T ss_dssp             ------------------------------------CTTTTSEEGGGCCCEETTSCHHHH
T ss_pred             HHHHHHHHHHH--HHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHH
Confidence            46889999754  45788999999999999999999999999999999999999987643

>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}

Probab=98.53  E-value=3.4e-08  Score=62.91  Aligned_cols=47  Identities=23%  Similarity=0.372  Sum_probs=40.2

Q ss_pred             cCCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         14 TSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        14 ~~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +..+|.|+++|++++.++++|.+.+|++||+|+.++++++.++++.+
T Consensus        13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~e   59 (173)
T 3ocm_A           13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAAT   59 (173)
T ss_dssp             -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHH
T ss_pred             HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHH
Confidence            34578899999999999999999999999999999999999998764

>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}

Probab=98.45  E-value=3.7e-08  Score=60.00  Aligned_cols=46  Identities=20%  Similarity=0.226  Sum_probs=27.8

Q ss_pred             CCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         16 NLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        16 ~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ++|.++++|++++.++++|.+.+|+++|+|+.++++++.++++.+.
T Consensus         2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a   47 (148)
T 3lv9_A            2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKI   47 (148)
T ss_dssp             ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHH
T ss_pred             CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHH
Confidence            4688999999999999999999999999999999999999987653

>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}

Probab=97.94  E-value=6e-07  Score=55.04  Aligned_cols=43  Identities=16%  Similarity=0.355  Sum_probs=34.7

Q ss_pred             cCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         19 ALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        19 ~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      .++++|++++.++++|++.+|+++|+|+.+++.++.++++.+.
T Consensus         2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~~a   44 (153)
T 3oco_A            2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIADA   44 (153)
T ss_dssp             ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHHHH
T ss_pred             CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHHHH
Confidence            3678899999999999999999999999999999999987653

>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C

Probab=97.74  E-value=3e-06  Score=56.91  Aligned_cols=46  Identities=7%  Similarity=0.086  Sum_probs=42.2

Q ss_pred             CCccCCHhHHHHHHhhhcc-CcceeccceeecccEEEeeCCCCCCHH
Q psy17078         16 NLVALKKDEVNIISGALEM-TQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        16 ~~g~l~~~E~~mi~g~lel-~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      +.+.++++|+.+++++++| ++.+|.|+|+|+.++++++.+.++.+.
T Consensus         8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a   54 (323)
T 3t4n_C            8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKS   54 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHH
Confidence            4677899999999999999 999999999999999999999987654

>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*

Probab=97.47  E-value=3.1e-05  Score=52.19  Aligned_cols=44  Identities=2%  Similarity=0.148  Sum_probs=38.3

Q ss_pred             ccCCHhHHHHHHhhhccCc-ceeccceeecccEEEeeCCCCCCHH
Q psy17078         18 VALKKDEVNIISGALEMTQ-KKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        18 g~l~~~E~~mi~g~lel~~-~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ++++++|..++.++++|-+ .+|+|+|+|+.++++++.+.++...
T Consensus         2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a   46 (334)
T 2qrd_G            2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTS   46 (334)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHH
T ss_pred             CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHH
Confidence            4577889999999999555 9999999999999999999987543

>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}

Probab=96.98  E-value=0.00044  Score=44.90  Aligned_cols=40  Identities=3%  Similarity=0.020  Sum_probs=36.2

Q ss_pred             cCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         19 ALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        19 ~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      .++++|++++.++|.+.+.+|+++|+|  ++++++.+.++.+
T Consensus        36 ~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~e   75 (205)
T 3kxr_A           36 QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVAQ   75 (205)
T ss_dssp             HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHHH
T ss_pred             cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHHH
Confidence            468999999999999999999999998  7889999988754

>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}

Probab=96.61  E-value=0.00045  Score=42.90  Aligned_cols=36  Identities=11%  Similarity=0.082  Sum_probs=29.3

Q ss_pred             HHHHhhh-ccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         26 NIISGAL-EMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        26 ~mi~g~l-el~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      .||...+ +|-.++++++|||+++|.+++.++++++.
T Consensus         3 ami~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~~a   39 (156)
T 3k6e_A            3 AMIAKEFETFLLGQEETFLTPAKNLAVLIDTHNADHA   39 (156)
T ss_dssp             HHHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHHHH
T ss_pred             chHHHHHHHHhhccHHHhCcchhHeEEECCcCCHHHH
Confidence            3555555 36678999999999999999999998654

>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*

Probab=96.45  E-value=0.00029  Score=47.38  Aligned_cols=45  Identities=4%  Similarity=0.100  Sum_probs=32.3

Q ss_pred             CCCccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         15 SNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        15 ~~~g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ...|.+.+.+.+.+.+.  |++.+|+|+|+|+.++++++.++++.+.
T Consensus        15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~~a   59 (330)
T 2v8q_E           15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVKKA   59 (330)
T ss_dssp             --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHHHH
T ss_pred             hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHHHH
Confidence            34566777777788887  4789999999999999999999987654

>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}

Probab=95.74  E-value=0.0022  Score=37.74  Aligned_cols=28  Identities=18%  Similarity=0.214  Sum_probs=21.2

Q ss_pred             ccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         33 EMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        33 el~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +|++.+|+++|+|+.++++++.++++.+
T Consensus         2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~   29 (130)
T 3i8n_A            2 NAQDVPVTQVMTPRPVVFRVDATMTINE   29 (130)
T ss_dssp             -----CCTTTSCCBCCCCEEETTSBHHH
T ss_pred             CcCcCCHhhCCCcHHHEEEEcCCCCHHH
Confidence            4789999999999999999999988764

>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}

Probab=95.03  E-value=0.0045  Score=36.37  Aligned_cols=27  Identities=26%  Similarity=0.305  Sum_probs=23.1

Q ss_pred             cCcceeccceeecccEEEeeCCCCCCH
Q psy17078         34 MTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        34 l~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      .++.+|+|+|+|+.++++++.++++.+
T Consensus         2 ~~~~~v~diM~~~~~~~~v~~~~~~~~   28 (129)
T 3jtf_A            2 NAERTVADIMVPRSRMDLLDISQPLPQ   28 (129)
T ss_dssp             --CCBHHHHCEEGGGCCCEETTSCHHH
T ss_pred             CCCCCHHHhCccHHHeEEECCCCCHHH
Confidence            468899999999999999999998865

>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A

Probab=95.00  E-value=0.011  Score=39.52  Aligned_cols=41  Identities=7%  Similarity=0.025  Sum_probs=36.2

Q ss_pred             ccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        18 g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +.++..++..+.++|++.+.+|+++|+|  ++++++.+.++..
T Consensus       116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~e  156 (278)
T 2yvy_A          116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVEE  156 (278)
T ss_dssp             HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHHH
T ss_pred             HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHHH
Confidence            4678899999999999999999999998  7888988887644

>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}

Probab=94.91  E-value=0.0049  Score=36.62  Aligned_cols=26  Identities=12%  Similarity=0.095  Sum_probs=22.1

Q ss_pred             CcceeccceeecccEEEeeCCCCCCH
Q psy17078         35 TQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        35 ~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      ++.+|+++|+|+.++++++.++++.+
T Consensus         1 ~~~~v~~iM~~~~~~~~v~~~~~v~~   26 (136)
T 3lfr_A            1 ADLQVRDIMVPRSQMISIKATQTPRE   26 (136)
T ss_dssp             --CBHHHHSEEGGGCCCEETTCCHHH
T ss_pred             CCCChHhccccHHHEEEEcCCCCHHH
Confidence            36799999999999999999998864

>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A

Probab=94.90  E-value=0.021  Score=41.57  Aligned_cols=41  Identities=7%  Similarity=0.025  Sum_probs=37.3

Q ss_pred             ccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        18 g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +.++.+++..+.+++++.+.+|+++|+|  ++++++.+.+..+
T Consensus       136 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~e  176 (473)
T 2zy9_A          136 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVEE  176 (473)
T ss_dssp             TSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHHH
T ss_pred             hcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHHH
Confidence            5788999999999999999999999998  7999999988754

>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}

Probab=94.80  E-value=0.0067  Score=35.84  Aligned_cols=25  Identities=20%  Similarity=0.235  Sum_probs=22.2

Q ss_pred             cceeccceeecccEEEeeCCCCCCH
Q psy17078         36 QKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        36 ~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +.+|+|+|+|+.++++++.++++.+
T Consensus         1 ~~~v~~iM~~~~~~~~v~~~~~v~~   25 (130)
T 3hf7_A            1 KVSVNDIMVPRNEIVGIDINDDWKS   25 (130)
T ss_dssp             CCBHHHHSEEGGGCCEEETTSCHHH
T ss_pred             CcCHHHhCccHHHEEEEcCCCCHHH
Confidence            3689999999999999999998864

>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}

Probab=93.89  E-value=0.011  Score=34.44  Aligned_cols=27  Identities=19%  Similarity=0.255  Sum_probs=22.5

Q ss_pred             CcceeccceeecccEEEeeCCCCCCHH
Q psy17078         35 TQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        35 ~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ++.+|+|+|+|+.+++.++.++++.+.
T Consensus         1 ~~~~v~diM~~~~~~~~v~~~~~~~~a   27 (127)
T 3nqr_A            1 ADQRVRDIMIPRSQMITLKRNQTLDEC   27 (127)
T ss_dssp             --CBHHHHSEEGGGCCCEETTCCHHHH
T ss_pred             CCcCHHHhcccHHHeEEEcCCCCHHHH
Confidence            467999999999999999999988653

>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1

Probab=92.77  E-value=0.046  Score=36.84  Aligned_cols=41  Identities=17%  Similarity=0.187  Sum_probs=35.6

Q ss_pred             ccCCHhHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        18 g~l~~~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +.++.+++..+.+++.+.+.+|+++|+|  ++++++.+.++..
T Consensus       118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~e  158 (286)
T 2oux_A          118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVRS  158 (286)
T ss_dssp             HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHHH
T ss_pred             HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHHH
Confidence            3578889999999999999999999997  7888888887654

>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}

Probab=92.10  E-value=0.034  Score=33.13  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=22.6

Q ss_pred             HHhhhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         28 ISGALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        28 i~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      ..+...|.+.+|+++|+|+.+++.++.+.++..
T Consensus         2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~~   34 (157)
T 2emq_A            2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLDH   34 (157)
T ss_dssp             --------CCBSTTTCEEGGGSCCBCTTSBHHH
T ss_pred             chhHhhHhhCcHHhhccCCccceEECCCCcHHH
Confidence            355667889999999999999999999988754

>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*

Probab=88.28  E-value=0.063  Score=31.95  Aligned_cols=39  Identities=13%  Similarity=0.196  Sum_probs=23.5

Q ss_pred             HhHHHHHHhhhccCc---ceeccceeecccEEEeeCCCCCCH
Q psy17078         22 KDEVNIISGALEMTQ---KKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        22 ~~E~~mi~g~lel~~---~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +++....++.-.++.   .+|+++|+|+.++..++.++++.+
T Consensus        10 ~~~~~~~~~~~~l~~~l~~~v~dim~~~~~~~~v~~~~~~~~   51 (149)
T 3k2v_A           10 AEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRD   51 (149)
T ss_dssp             ----------CHHHHHTTSBGGGTSBCGGGSCEECTTCBHHH
T ss_pred             HHHhhhcCCCchhchhcccCHHHHhcCCCCCeEECCCCcHHH
Confidence            344444444444444   499999999999999999988755

>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1

Probab=88.06  E-value=0.11  Score=31.10  Aligned_cols=30  Identities=13%  Similarity=0.217  Sum_probs=24.8

Q ss_pred             hccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         32 LEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        32 lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ..|...+|+++|+|+.+++.++.++++.+.
T Consensus         9 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a   38 (159)
T 1yav_A            9 DQLLEATVGQFMIEADKVAHVQVGNNLEHA   38 (159)
T ss_dssp             --CTTCBHHHHSEEGGGSCCEETTCBHHHH
T ss_pred             HHHhHhhHHHHhCCccceEEECCCCcHHHH
Confidence            367889999999999999999999887543

>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0

Probab=86.65  E-value=0.064  Score=31.73  Aligned_cols=30  Identities=20%  Similarity=0.183  Sum_probs=25.7

Q ss_pred             hhccCcceeccceeecccEEEeeCCCCCCH
Q psy17078         31 ALEMTQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        31 ~lel~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      .-.|.+.+|+++|+|..++..++.++++.+
T Consensus         9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~   38 (150)
T 3lqn_A            9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEH   38 (150)
T ss_dssp             HHHHHHCBHHHHSEEGGGSCCBCTTSBHHH
T ss_pred             HHhhhcCChhhcccCCCceEEECCCCcHHH
Confidence            445788999999999999999999988754

>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}

Probab=85.96  E-value=0.21  Score=29.02  Aligned_cols=26  Identities=27%  Similarity=0.225  Sum_probs=22.7

Q ss_pred             CcceeccceeecccEEEeeCCCCCCH
Q psy17078         35 TQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        35 ~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      +..+|+++|+|+.+++.++.++++..
T Consensus         3 ~~~~v~~im~~~~~~~~v~~~~~~~~   28 (152)
T 4gqw_A            3 GVYTVGEFMTKKEDLHVVKPTTTVDE   28 (152)
T ss_dssp             CCSBGGGTSEESTTCCCBCTTSBHHH
T ss_pred             ceEEhhhccCCCCCCeEECCCCcHHH
Confidence            46789999999999999999988754

>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}

Probab=84.78  E-value=0.13  Score=38.55  Aligned_cols=26  Identities=15%  Similarity=0.091  Sum_probs=23.4

Q ss_pred             CcceeccceeecccEEEeeCCCCCCH
Q psy17078         35 TQKKVEEIMTKLDDCYMLDIETILNF   60 (68)
Q Consensus        35 ~~~~V~diMtPr~~V~~L~~d~~l~~   60 (68)
                      .+.+|+|+|+||.++..++.++++.+
T Consensus       451 ~~~~V~diM~p~~~v~~v~~~~t~~e  476 (632)
T 3org_A          451 PEMTAREIMHPIEGEPHLFPDSEPQH  476 (632)
T ss_dssp             TTSBHHHHCBCTTTSCCBCSSSCHHH
T ss_pred             ccCcHHHHhhcCCCceEecCCCcHHH
Confidence            67899999999999999999988754

>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}

Probab=84.39  E-value=0.41  Score=29.03  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=26.0

Q ss_pred             hHHHHHHhhhccCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         23 DEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        23 ~E~~mi~g~lel~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      .++..+..+  +++.+|+|||++  ++++++.++++.+.
T Consensus         6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~~a   40 (170)
T 4esy_A            6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLDAV   40 (170)
T ss_dssp             HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHHHH
T ss_pred             HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHHHH
Confidence            345555554  468999999986  78999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	68
d2ooxe1	179	Uncharacterized protein C1556.08c {Schizosaccharom	95.95
d1yava3	132	Hypothetical protein YkuL {Bacillus subtilis [TaxI	95.67
d2v8qe2	159	5'-AMP-activated protein kinase subunit gamma-1, A	93.01
d2ef7a1	127	Uncharacterized protein ST2348 {Sulfolobus tokodai	81.86
d2d4za3	160	Chloride channel protein, CBS tandem {Marbled elec	80.57

>d2ooxe1 d.37.1.1 (E:3-181) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: CBS-domain pair
superfamily: CBS-domain pair
family: CBS-domain pair
domain: Uncharacterized protein C1556.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.95  E-value=0.00064  Score=40.89  Aligned_cols=43  Identities=2%  Similarity=0.149  Sum_probs=37.4

Q ss_pred             CCHhHHHHHHhhhcc-CcceeccceeecccEEEeeCCCCCCHHH
Q psy17078         20 LKKDEVNIISGALEM-TQKKVEEIMTKLDDCYMLDIETILNFTV   62 (68)
Q Consensus        20 l~~~E~~mi~g~lel-~~~~V~diMtPr~~V~~L~~d~~l~~~t   62 (68)
                      +.+.++..++.+.+| .++++.|+|+|..+++.++.+.++....
T Consensus         2 ~~~~~~~~~~~i~~fl~~~~~~dvm~~s~~vv~i~~~~~v~~A~   45 (179)
T d2ooxe1           2 VQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSL   45 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHH
T ss_pred             cCHHHHHHHHHHHHHHcCCEeeeeCCCCCcEEEEECcchHHHHH
Confidence            346678899999996 9999999999999999999999987543

>d1yava3 d.37.1.1 (A:13-144) Hypothetical protein YkuL {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: CBS-domain pair
superfamily: CBS-domain pair
family: CBS-domain pair
domain: Hypothetical protein YkuL
species: Bacillus subtilis [TaxId: 1423]

Probab=95.67  E-value=0.00091  Score=38.76  Aligned_cols=26  Identities=15%  Similarity=0.261  Sum_probs=23.6

Q ss_pred             cceeccceeecccEEEeeCCCCCCHH
Q psy17078         36 QKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        36 ~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      ++||+++|+|.++|.+++.++++.+.
T Consensus         1 e~tv~~~mip~~~v~~v~~~~tl~~a   26 (132)
T d1yava3           1 EATVGQFMIEADKVAHVQVGNNLEHA   26 (132)
T ss_dssp             TCBHHHHSEEGGGSCCEETTCBHHHH
T ss_pred             CCCHHHccccccceEEEcCCCCHHHH
Confidence            57999999999999999999998664

>d2v8qe2 d.37.1.1 (E:23-181) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: CBS-domain pair
superfamily: CBS-domain pair
family: CBS-domain pair
domain: 5'-AMP-activated protein kinase subunit gamma-1, AMPKg
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.01  E-value=0.0091  Score=34.89  Aligned_cols=29  Identities=7%  Similarity=0.167  Sum_probs=25.3

Q ss_pred             cCcceeccceeecccEEEeeCCCCCCHHH
Q psy17078         34 MTQKKVEEIMTKLDDCYMLDIETILNFTV   62 (68)
Q Consensus        34 l~~~~V~diMtPr~~V~~L~~d~~l~~~t   62 (68)
                      |..+||.|+|+|..+|++++.+.++.+..
T Consensus        10 l~~~t~~Dlm~~~~~vv~l~~~~sv~eA~   38 (159)
T d2v8qe2          10 MKSHRCYDLIPTSSKLVVFDTSLQVKKAF   38 (159)
T ss_dssp             HHHSBGGGGSCSEEEEEEEETTSBHHHHH
T ss_pred             hcCCEEEeECCCCCceEEEcCCCcHHHHH
Confidence            56889999999999999999999876543

>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a+b)
fold: CBS-domain pair
superfamily: CBS-domain pair
family: CBS-domain pair
domain: Uncharacterized protein ST2348
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=81.86  E-value=0.23  Score=27.79  Aligned_cols=26  Identities=23%  Similarity=0.250  Sum_probs=21.8

Q ss_pred             cCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         34 MTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        34 l~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      |.+.+|+++|++  ++++++.++++...
T Consensus         1 l~~~~V~d~m~~--~~v~v~~~~tl~~a   26 (127)
T d2ef7a1           1 MEEEIVKEYMKT--QVISVTKDAKLNDI   26 (127)
T ss_dssp             CCCCBGGGTSBC--SCCEEETTCBHHHH
T ss_pred             CCccCHHHhCCC--CCeEECCcCcHHHH
Confidence            578899999986  79999999887653

>d2d4za3 d.37.1.1 (A:527-606,A:691-770) Chloride channel protein, CBS tandem {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}

class: Alpha and beta proteins (a+b)
fold: CBS-domain pair
superfamily: CBS-domain pair
family: CBS-domain pair
domain: Chloride channel protein, CBS tandem
species: Marbled electric ray (Torpedo marmorata) [TaxId: 7788]

Probab=80.57  E-value=0.15  Score=28.96  Aligned_cols=26  Identities=15%  Similarity=0.138  Sum_probs=21.4

Q ss_pred             cCcceeccceeecccEEEeeCCCCCCHH
Q psy17078         34 MTQKKVEEIMTKLDDCYMLDIETILNFT   61 (68)
Q Consensus        34 l~~~~V~diMtPr~~V~~L~~d~~l~~~   61 (68)
                      -.+.+|+|||++  ++.+++.++++.+.
T Consensus         8 ~~~~~V~diM~~--~~~~v~~~~tv~e~   33 (160)
T d2d4za3           8 KYNIQVGDIMVR--DVTSIASTSTYGDL   33 (160)
T ss_dssp             CSSCBTTSSSBS--SCCCEETTCBHHHH
T ss_pred             ccceEHHHhcCC--CCeEECCCCcHHHH
Confidence            347799999995  89999999987654