Psyllid ID: psy17135

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
Protein Sequence
MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Secondary Structure (PSIPRED)
cccccccEEEEEEcccccEEccccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccccccEEEEEEcccccEEEEEcccccEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHcccccccccccHEEEEcccccEEEEEccccccEEEEEEcccccEEEEHHHHHHHccccEEEEEEcccccEEEEccccEEEEEEc
Coil and Loop (DISEMBL)
MQKVPSSVIYIWTLLELQtyarndcpelnseppacqtipssnislfdsrpghdcsirlwnldnKTCVQEITAHRKKfdesildvafhpskpfiasagadglAKVFV
Flexible Loop (DISEMBL)
MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Low Complexity Region (SEG)
MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Disordered region (IsUnstruct)
******SVIYIWTLLELQTYARNDCP****************ISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASA**********
Disordered Region (DISOPRED)
****PSS*IYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Disordered Region (DISEMBL)
MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Disordered Region (DISPRO)
***VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	106	2.2.26 [Sep-21-2011]
A5D7H2	797	Striatin-3 OS=Bos taurus	yes	N/A	0.518	0.069	0.890	2e-23
P58405	794	Striatin-3 OS=Rattus norv	yes	N/A	0.518	0.069	0.890	2e-23
Q9ERG2	796	Striatin-3 OS=Mus musculu	yes	N/A	0.518	0.069	0.890	2e-23
Q13033	797	Striatin-3 OS=Homo sapien	yes	N/A	0.518	0.069	0.872	2e-22
P70483	780	Striatin OS=Rattus norveg	no	N/A	0.518	0.070	0.836	7e-22
O55106	780	Striatin OS=Mus musculus	no	N/A	0.518	0.070	0.836	7e-22
O43815	780	Striatin OS=Homo sapiens	no	N/A	0.518	0.070	0.836	7e-22
P58404	760	Striatin-4 OS=Mus musculu	no	N/A	0.518	0.072	0.8	2e-19
Q9NRL3	753	Striatin-4 OS=Homo sapien	no	N/A	0.518	0.073	0.8	2e-19
Q54J37	827	Striatin homolog OS=Dicty	yes	N/A	0.518	0.066	0.454	2e-11

>sp|A5D7H2|STRN3_BOVIN Striatin-3 OS=Bos taurus GN=STRN3 PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct: 743 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 797

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.
Bos taurus (taxid: 9913)

>sp|P58405|STRN3_RAT Striatin-3 OS=Rattus norvegicus GN=Strn3 PE=2 SV=2

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct: 740 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 794

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Rattus norvegicus (taxid: 10116)

>sp|Q9ERG2|STRN3_MOUSE Striatin-3 OS=Mus musculus GN=Strn3 PE=1 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct: 742 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 796

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Mus musculus (taxid: 10090)

>sp|Q13033|STRN3_HUMAN Striatin-3 OS=Homo sapiens GN=STRN3 PE=1 SV=3

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 50/55 (90%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFH SK +IASAGAD LAKVFV
Sbjct: 743 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHSSKAYIASAGADALAKVFV 797

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Homo sapiens (taxid: 9606)

>sp|P70483|STRN_RAT Striatin OS=Rattus norvegicus GN=Strn PE=1 SV=1

 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNL++KTC+QE TAHRKKF+ESI DVAFHPSK +IASAGAD LAKVFV
Sbjct: 726 HDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Rattus norvegicus (taxid: 10116)

>sp|O55106|STRN_MOUSE Striatin OS=Mus musculus GN=Strn PE=1 SV=2

 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNL++KTC+QE TAHRKKF+ESI DVAFHPSK +IASAGAD LAKVFV
Sbjct: 726 HDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Mus musculus (taxid: 10090)

>sp|O43815|STRN_HUMAN Striatin OS=Homo sapiens GN=STRN PE=1 SV=4

 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNL++KTC+QE TAHRKKF+ESI DVAFHPSK +IASAGAD LAKVFV
Sbjct: 726 HDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780

Calmodulin-binding protein which may function as scaffolding or signaling protein and may play a role in dendritic Ca(2+) signaling.

Homo sapiens (taxid: 9606)

>sp|P58404|STRN4_MOUSE Striatin-4 OS=Mus musculus GN=Strn4 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCS+RLW+LDNKTCVQEITAHRKK +E+I  VA HPSK  IASAGAD LAKVFV
Sbjct: 706 HDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV 760

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Mus musculus (taxid: 10090)

>sp|Q9NRL3|STRN4_HUMAN Striatin-4 OS=Homo sapiens GN=STRN4 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCS+RLW+LDNKTCVQEITAHRKK +E+I  VA HPSK  IASAGAD LAKVFV
Sbjct: 699 HDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV 753

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Homo sapiens (taxid: 9606)

>sp|Q54J37|STRN_DICDI Striatin homolog OS=Dictyostelium discoideum GN=strn PE=3 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 40/55 (72%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
            HD SIR W++ +KTC+Q++ +HR K+DESI  + +HP+K + AS GAD + ++ 
Sbjct: 772 AHDSSIRFWDISSKTCIQDLNSHRPKYDESIHCIKYHPNKGYFASGGADSVIRIL 826

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
345493506	744	PREDICTED: striatin-3-like [Nasonia vitr	0.518	0.073	0.945	2e-24
332031514	723	Striatin-4 [Acromyrmex echinatior]	0.518	0.076	0.945	2e-24
307173814	744	Striatin-3 [Camponotus floridanus]	0.518	0.073	0.945	2e-24
322802281	760	hypothetical protein SINV_06980 [Solenop	0.518	0.072	0.945	2e-24
307205403	724	Striatin-3 [Harpegnathos saltator]	0.518	0.075	0.945	2e-24
350410638	705	PREDICTED: striatin-3-like isoform 1 [Bo	0.518	0.078	0.927	3e-24
189236270	650	PREDICTED: similar to AGAP008755-PA [Tri	0.518	0.084	0.927	5e-24
195472889	748	GE18729 [Drosophila yakuba] gi|194174832	0.518	0.073	0.927	5e-24
242010921	733	Striatin, putative [Pediculus humanus co	0.594	0.085	0.857	5e-24
386769312	749	connector of kinase to AP-1, isoform E [	0.518	0.073	0.927	5e-24

>gi|345493506|ref|XP_001601585.2| PREDICTED: striatin-3-like [Nasonia vitripennis]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWN+DNKTCVQEITAHRKKFDESILDVAFHPS+PFIASAGAD LAKVFV
Sbjct: 690 HDCSIRLWNMDNKTCVQEITAHRKKFDESILDVAFHPSRPFIASAGADALAKVFV 744

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031514|gb|EGI70986.1| Striatin-4 [Acromyrmex echinatior]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWN+DNKTCVQEITAHRKKFDESILDVAFHPS+PFIASAGAD LAKVFV
Sbjct: 669 HDCSIRLWNMDNKTCVQEITAHRKKFDESILDVAFHPSRPFIASAGADALAKVFV 723

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173814|gb|EFN64592.1| Striatin-3 [Camponotus floridanus]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWN+DNKTCVQEITAHRKKFDESILDVAFHPS+PFIASAGAD LAKVFV
Sbjct: 690 HDCSIRLWNMDNKTCVQEITAHRKKFDESILDVAFHPSRPFIASAGADALAKVFV 744

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322802281|gb|EFZ22677.1| hypothetical protein SINV_06980 [Solenopsis invicta]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWN+DNKTCVQEITAHRKKFDESILDVAFHPS+PFIASAGAD LAKVFV
Sbjct: 706 HDCSIRLWNMDNKTCVQEITAHRKKFDESILDVAFHPSRPFIASAGADALAKVFV 760

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205403|gb|EFN83744.1| Striatin-3 [Harpegnathos saltator]

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWN+DNKTCVQEITAHRKKFDESILDVAFHPS+PFIASAGAD LAKVFV
Sbjct: 670 HDCSIRLWNMDNKTCVQEITAHRKKFDESILDVAFHPSRPFIASAGADALAKVFV 724

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410638|ref|XP_003489099.1| PREDICTED: striatin-3-like isoform 1 [Bombus impatiens]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWN+DNKTCVQEITAHRKKFDESILDVAFHPS+PFIASAGAD LAKV+V
Sbjct: 651 HDCSIRLWNMDNKTCVQEITAHRKKFDESILDVAFHPSRPFIASAGADALAKVYV 705

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189236270|ref|XP_001814737.1| PREDICTED: similar to AGAP008755-PA [Tribolium castaneum]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 54/55 (98%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLDNKTCVQEITAHRKKF ESILDVAFHP++P+IASAGADGLAKVFV
Sbjct: 596 HDCSIRLWNLDNKTCVQEITAHRKKFHESILDVAFHPTRPYIASAGADGLAKVFV 650

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195472889|ref|XP_002088731.1| GE18729 [Drosophila yakuba] gi|194174832|gb|EDW88443.1| GE18729 [Drosophila yakuba]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 53/55 (96%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLDNKTCVQEITAHRKKFDESI DVAFH +KP+IASAGADGLAKVFV
Sbjct: 694 HDCSIRLWNLDNKTCVQEITAHRKKFDESIFDVAFHATKPYIASAGADGLAKVFV 748

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010921|ref|XP_002426206.1| Striatin, putative [Pediculus humanus corporis] gi|212510257|gb|EEB13468.1| Striatin, putative [Pediculus humanus corporis]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 56/63 (88%)

Query: 44  SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAK 103
            LF     HDCSIRLWNLD+KTCVQEITAHRKKFDESILDVAFHPS P+IASAGADGLAK
Sbjct: 671 GLFLLSGSHDCSIRLWNLDSKTCVQEITAHRKKFDESILDVAFHPSSPYIASAGADGLAK 730

Query: 104 VFV 106
           VFV
Sbjct: 731 VFV 733

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769312|ref|NP_001245936.1| connector of kinase to AP-1, isoform E [Drosophila melanogaster] gi|284515840|gb|ADB91427.1| MIP15828p [Drosophila melanogaster] gi|383291389|gb|AFH03610.1| connector of kinase to AP-1, isoform E [Drosophila melanogaster]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 53/55 (96%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           HDCSIRLWNLDNKTCVQEITAHRKKFDESI DVAFH +KP+IASAGADGLAKVFV
Sbjct: 695 HDCSIRLWNLDNKTCVQEITAHRKKFDESIFDVAFHATKPYIASAGADGLAKVFV 749

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
FB|FBgn0044323	730	Cka "Connector of kinase to AP	0.698	0.101	0.710	3.5e-23
RGD|621827	794	Strn3 "striatin, calmodulin bi	0.518	0.069	0.890	3.9e-22
MGI|MGI:2151064	796	Strn3 "striatin, calmodulin bi	0.518	0.069	0.890	3.9e-22
UNIPROTKB|A5D7H2	797	STRN3 "Striatin-3" [Bos taurus	0.518	0.069	0.890	3.9e-22
UNIPROTKB|F1NH54	811	STRN3 "Uncharacterized protein	0.518	0.067	0.890	2.8e-21
UNIPROTKB|E1C837	800	STRN "Uncharacterized protein"	0.518	0.068	0.854	1.6e-20
UNIPROTKB|Q13033	797	STRN3 "Striatin-3" [Homo sapie	0.518	0.069	0.872	2e-20
UNIPROTKB|E1BFB3	780	STRN "Uncharacterized protein"	0.518	0.070	0.836	4e-20
UNIPROTKB|O43815	780	STRN "Striatin" [Homo sapiens	0.518	0.070	0.836	4e-20
UNIPROTKB|F1S4P0	780	STRN "Uncharacterized protein"	0.518	0.070	0.836	4e-20

FB|FBgn0044323 Cka "Connector of kinase to AP-1" [Drosophila melanogaster (taxid:7227)]

 Score = 277 (102.6 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 54/76 (71%), Positives = 59/76 (77%)

Query:    31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSK 90
             EP     + +  + L      HDCSIRLWNLDNKTCVQEITAHRKKFDESI DVAFH +K
Sbjct:   657 EPVTSLAVDAHGLYLLSG--SHDCSIRLWNLDNKTCVQEITAHRKKFDESIFDVAFHATK 714

Query:    91 PFIASAGADGLAKVFV 106
             P+IASAGADGLAKVFV
Sbjct:   715 PYIASAGADGLAKVFV 730

GO:0007254 "JNK cascade" evidence=NAS;TAS

GO:0007391 "dorsal closure" evidence=IMP;NAS;TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0046330 "positive regulation of JNK cascade" evidence=IGI;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0042051 "compound eye photoreceptor development" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0072686 "mitotic spindle" evidence=IDA

RGD|621827 Strn3 "striatin, calmodulin binding protein 3" [Rattus norvegicus (taxid:10116)]

 Score = 260 (96.6 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   740 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 794

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA;ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0030425 "dendrite" evidence=IDA

GO:0032355 "response to estradiol stimulus" evidence=IDA

GO:0032403 "protein complex binding" evidence=ISO;IDA;IPI

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043234 "protein complex" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0051721 "protein phosphatase 2A binding" evidence=IEA;ISO

GO:0070016 "armadillo repeat domain binding" evidence=IEA;ISO

MGI|MGI:2151064 Strn3 "striatin, calmodulin binding protein 3" [Mus musculus (taxid:10090)]

 Score = 260 (96.6 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   742 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 796

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0030425 "dendrite" evidence=ISO

GO:0032355 "response to estradiol stimulus" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0051721 "protein phosphatase 2A binding" evidence=ISO

GO:0070016 "armadillo repeat domain binding" evidence=ISO

UNIPROTKB|A5D7H2 STRN3 "Striatin-3" [Bos taurus (taxid:9913)]

 Score = 260 (96.6 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   743 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 797

GO:0005737 "cytoplasm" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

GO:0070016 "armadillo repeat domain binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

UNIPROTKB|F1NH54 STRN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 260 (96.6 bits), Expect = 2.8e-21, P = 2.8e-21
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   757 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV 811

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0070016 "armadillo repeat domain binding" evidence=IEA

UNIPROTKB|E1C837 STRN "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 253 (94.1 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 47/55 (85%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNL++KTC+QE TAHRKKFDESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   746 HDCSIRLWNLESKTCIQEFTAHRKKFDESIHDVAFHPSKCYIASAGADALAKVFV 800

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0070016 "armadillo repeat domain binding" evidence=IEA

UNIPROTKB|Q13033 STRN3 "Striatin-3" [Homo sapiens (taxid:9606)]

 Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
 Identities = 48/55 (87%), Positives = 50/55 (90%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNLD+KTCVQEITAHRKK DESI DVAFH SK +IASAGAD LAKVFV
Sbjct:   743 HDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHSSKAYIASAGADALAKVFV 797

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005516 "calmodulin binding" evidence=NAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0032403 "protein complex binding" evidence=IDA

GO:0043234 "protein complex" evidence=ISS

GO:0043025 "neuronal cell body" evidence=ISS

GO:0030425 "dendrite" evidence=ISS

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=ISS

GO:0032355 "response to estradiol stimulus" evidence=ISS

GO:0051721 "protein phosphatase 2A binding" evidence=IDA

GO:0000159 "protein phosphatase type 2A complex" evidence=IDA

GO:0070016 "armadillo repeat domain binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E1BFB3 STRN "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 249 (92.7 bits), Expect = 4.0e-20, P = 4.0e-20
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNL++KTC+QE TAHRKKF+ESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   726 HDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780

GO:0070016 "armadillo repeat domain binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

UNIPROTKB|O43815 STRN "Striatin" [Homo sapiens (taxid:9606)]

 Score = 249 (92.7 bits), Expect = 4.0e-20, P = 4.0e-20
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNL++KTC+QE TAHRKKF+ESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   726 HDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780

GO:0005737 "cytoplasm" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS;NAS

GO:0043025 "neuronal cell body" evidence=ISS

GO:0014069 "postsynaptic density" evidence=ISS

GO:0016358 "dendrite development" evidence=ISS

GO:0007626 "locomotory behavior" evidence=ISS

GO:0032403 "protein complex binding" evidence=IDA

GO:0051721 "protein phosphatase 2A binding" evidence=IDA

GO:0000159 "protein phosphatase type 2A complex" evidence=IDA

GO:0070016 "armadillo repeat domain binding" evidence=IPI

GO:0005923 "tight junction" evidence=IDA

GO:0016055 "Wnt receptor signaling pathway" evidence=IMP

GO:0016020 "membrane" evidence=ISS

GO:0043197 "dendritic spine" evidence=ISS

GO:0070830 "tight junction assembly" evidence=NAS

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0045211 "postsynaptic membrane" evidence=ISS

GO:0030331 "estrogen receptor binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1S4P0 STRN "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 249 (92.7 bits), Expect = 4.0e-20, P = 4.0e-20
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query:    52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             HDCSIRLWNL++KTC+QE TAHRKKF+ESI DVAFHPSK +IASAGAD LAKVFV
Sbjct:   726 HDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780

GO:0070016 "armadillo repeat domain binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A5D7H2	STRN3_BOVIN	No assigned EC number	0.8909	0.5188	0.0690	yes	N/A
Q13033	STRN3_HUMAN	No assigned EC number	0.8727	0.5188	0.0690	yes	N/A
P58405	STRN3_RAT	No assigned EC number	0.8909	0.5188	0.0692	yes	N/A
Q9ERG2	STRN3_MOUSE	No assigned EC number	0.8909	0.5188	0.0690	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	106
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-11
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-09
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-08
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	7e-08
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-05
smart00320	40	smart00320, WD40, WD40 repeats	4e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.001
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	0.001

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +IR+W+L    CVQ ++ H      S+  +A+ P    +AS  ADG  +++
Sbjct: 238 SEDGTIRVWDLRTGECVQTLSGH----TNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +I++W+++   C+  +  H       +  VAF P   F+AS+  DG  K++
Sbjct: 112 SRDKTIKVWDVETGKCLTTLRGHTD----WVNSVAFSPDGTFVASSSQDGTIKLW 162

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 48.5 bits (116), Expect = 5e-08
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +I+LW+L    CV  +T H       +  VAF P    + S+ +DG  K++
Sbjct: 154 SQDGTIKLWDLRTGKCVATLTGH----TGEVNSVAFSPDGEKLLSSSSDGTIKLW 204

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +I+LW+L    C+  +  H    +  +  VAF P    +AS   DG  +V+
Sbjct: 196 SSDGTIKLWDLSTGKCLGTLRGH----ENGVNSVAFSPDGYLLASGSEDGTIRVW 246

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 53  DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           D +IRLW+L+   CV+ +T H       +  VAF P    ++S+  D   KV+
Sbjct: 72  DKTIRLWDLETGECVRTLTGHTS----YVSSVAFSPDGRILSSSSRDKTIKVW 120

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +I++W+L+    ++ +  H       + DVA      ++AS  +D   +++
Sbjct: 28  SGDGTIKVWDLETGELLRTLKGHTG----PVRDVAASADGTYLASGSSDKTIRLW 78

Length = 289

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 4/43 (9%)

Query: 63  NKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           +   ++ +  H       +  VAF P   ++AS   DG  K++
Sbjct: 1   SGELLKTLKGHTG----PVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 64  KTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
              ++ +  H       +  VAF P    +AS   DG  +V+
Sbjct: 1   GKLLRTLKGHTG----PVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 37.4 bits (85), Expect = 6e-04
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 51  GHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +IRLW+L +  + ++ ++ H      S+L VAF P    +AS  +DG  +++
Sbjct: 260 SSDGTIRLWDLRSSSSLLRTLSGH----SSSVLSVAFSPDGKLLASGSSDGTVRLW 311

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 66  CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             + +  H       +  VAF P    +A+   DG  KV+
Sbjct: 1   LRRTLKGHTGG----VTCVAFSPDGKLLATGSGDGTIKVW 36

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 36.6 bits (83), Expect = 0.001
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 40  SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF-IASAGA 98
           S +  L  S    D +I+LW+L     +  +  H       +  +AF P     IAS  +
Sbjct: 164 SPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD----PVSSLAFSPDGGLLIASGSS 219

Query: 99  DGLAKVF 105
           DG  +++
Sbjct: 220 DGTIRLW 226

Length = 466

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	106
KOG0286|consensus	343		99.84
KOG0263|consensus	707		99.83
KOG0263|consensus	707		99.83
KOG0266|consensus	456		99.82
KOG0272|consensus	459		99.82
KOG0272|consensus	459		99.81
KOG0271|consensus	480		99.81
KOG0285|consensus	460		99.81
KOG0284|consensus	464		99.81
KOG0302|consensus	440		99.8
KOG0264|consensus	422		99.79
KOG0279|consensus	315		99.78
PTZ00421	493	coronin; Provisional	99.78
KOG0273|consensus	524		99.77
KOG0276|consensus	794		99.77
KOG0279|consensus	315		99.76
KOG0295|consensus	406		99.76
KOG0286|consensus	343		99.75
KOG0319|consensus	775		99.75
KOG0271|consensus	480		99.75
KOG0316|consensus	307		99.74
KOG0275|consensus	508		99.74
KOG0295|consensus	406		99.74
KOG0269|consensus	839		99.72
KOG0277|consensus	311		99.71
KOG0266|consensus	456		99.71
KOG0293|consensus	519		99.71
KOG0296|consensus	399		99.71
KOG0277|consensus	311		99.71
KOG0291|consensus	893		99.71
KOG0291|consensus	893		99.71
KOG0292|consensus	1202		99.71
PTZ00420	568	coronin; Provisional	99.69
KOG0282|consensus	503		99.69
KOG0645|consensus	312		99.68
KOG0278|consensus	334		99.68
KOG0315|consensus	311		99.68
KOG0315|consensus	311		99.68
KOG0292|consensus	1202		99.68
KOG0285|consensus	460		99.67
KOG0647|consensus	347		99.67
KOG0772|consensus	641		99.67
KOG0319|consensus	775		99.67
KOG4283|consensus	397		99.66
KOG0318|consensus	603		99.66
KOG0281|consensus	499		99.65
KOG0281|consensus	499		99.64
KOG0276|consensus	794		99.64
KOG0289|consensus	506		99.63
KOG0264|consensus	422		99.63
KOG0313|consensus	423		99.63
PTZ00421	493	coronin; Provisional	99.63
KOG0284|consensus	464		99.63
KOG0282|consensus	503		99.63
KOG0267|consensus	825		99.62
PLN00181	793	protein SPA1-RELATED; Provisional	99.61
KOG0294|consensus	362		99.61
KOG0273|consensus	524		99.6
KOG0265|consensus	338		99.59
PTZ00420	568	coronin; Provisional	99.59
KOG1445|consensus	1012		99.59
KOG0313|consensus	423		99.58
KOG0306|consensus	888		99.58
KOG1034|consensus	385		99.57
KOG0275|consensus	508		99.57
KOG0645|consensus	312		99.56
PLN00181	793	protein SPA1-RELATED; Provisional	99.56
KOG0316|consensus	307		99.56
KOG0265|consensus	338		99.56
KOG0643|consensus	327		99.55
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.55
KOG0303|consensus	472		99.55
KOG0283|consensus	712		99.55
KOG0274|consensus	537		99.55
KOG0640|consensus	430		99.54
KOG0640|consensus	430		99.54
KOG4283|consensus	397		99.53
KOG0274|consensus	537		99.53
KOG0318|consensus	603		99.52
KOG0310|consensus	487		99.52
KOG0269|consensus	839		99.52
KOG0288|consensus	459		99.52
KOG1007|consensus	370		99.52
KOG1407|consensus	313		99.52
KOG0308|consensus	735		99.52
KOG0310|consensus	487		99.51
KOG0302|consensus	440		99.51
KOG0639|consensus	705		99.51
KOG0283|consensus	712		99.5
KOG0322|consensus	323		99.5
KOG0268|consensus	433		99.5
KOG0305|consensus	484		99.49
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.49
KOG0306|consensus	888		99.47
KOG0305|consensus	484		99.46
KOG0270|consensus	463		99.45
KOG0301|consensus	745		99.45
KOG0289|consensus	506		99.45
KOG1539|consensus	910		99.45
KOG0641|consensus	350		99.45
KOG0308|consensus	735		99.45
KOG0296|consensus	399		99.44
KOG1273|consensus	405		99.43
KOG1408|consensus	1080		99.43
KOG1188|consensus	376		99.43
KOG2111|consensus	346		99.43
KOG0267|consensus	825		99.42
KOG1446|consensus	311		99.42
KOG0270|consensus	463		99.41
KOG0268|consensus	433		99.4
KOG2110|consensus	391		99.39
KOG0300|consensus	481		99.38
KOG1332|consensus	299		99.38
KOG0288|consensus	459		99.37
KOG2096|consensus	420		99.37
KOG1407|consensus	313		99.37
KOG0301|consensus	745		99.37
KOG0293|consensus	519		99.36
KOG0646|consensus	476		99.36
KOG0290|consensus	364		99.35
KOG1539|consensus	910		99.35
KOG0639|consensus	705		99.34
KOG2445|consensus	361		99.34
KOG1036|consensus	323		99.34
KOG0321|consensus	720		99.32
KOG0294|consensus	362		99.3
KOG1332|consensus	299		99.29
KOG1446|consensus	311		99.29
KOG1007|consensus	370		99.28
KOG1274|consensus	933		99.27
KOG0299|consensus	479		99.27
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.27
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.26
KOG1408|consensus	1080		99.26
KOG0772|consensus	641		99.25
KOG0321|consensus	720		99.25
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.24
KOG1036|consensus	323		99.24
KOG0278|consensus	334		99.23
KOG4378|consensus	673		99.22
KOG0642|consensus	577		99.22
KOG0303|consensus	472		99.22
KOG0646|consensus	476		99.22
KOG0299|consensus	479		99.21
KOG0973|consensus	942		99.21
KOG2110|consensus	391		99.21
KOG0307|consensus	1049		99.2
KOG0973|consensus	942		99.2
KOG2394|consensus	636		99.18
KOG1009|consensus	434		99.17
KOG0644|consensus	1113		99.15
KOG0647|consensus	347		99.15
KOG1445|consensus	1012		99.14
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.13
KOG0649|consensus	325		99.13
KOG2048|consensus	691		99.12
KOG0300|consensus	481		99.11
KOG4328|consensus	498		99.11
KOG1063|consensus	764		99.1
KOG0649|consensus	325		99.08
KOG1272|consensus	545		99.08
KOG2048|consensus	691		99.07
KOG0643|consensus	327		99.07
KOG3881|consensus	412		99.06
KOG0307|consensus	1049		99.05
KOG2445|consensus	361		99.04
KOG1273|consensus	405		99.03
KOG0641|consensus	350		99.0
KOG0290|consensus	364		98.99
KOG1587|consensus	555		98.98
KOG2106|consensus	626		98.98
KOG1034|consensus	385		98.97
KOG0771|consensus	398		98.97
KOG2055|consensus	514		98.97
KOG1274|consensus	933		98.96
KOG2096|consensus	420		98.96
KOG2394|consensus	636		98.96
COG2319	466	FOG: WD40 repeat [General function prediction only	98.95
KOG1310|consensus	758		98.94
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.94
KOG4328|consensus	498		98.93
KOG4378|consensus	673		98.92
KOG1524|consensus	737		98.88
KOG2055|consensus	514		98.88
KOG4714|consensus	319		98.88
KOG0974|consensus	967		98.86
KOG1310|consensus	758		98.84
KOG1272|consensus	545		98.83
COG2319	466	FOG: WD40 repeat [General function prediction only	98.82
KOG0974|consensus	967		98.82
KOG0771|consensus	398		98.82
KOG0280|consensus	339		98.81
KOG1517|consensus	1387		98.81
KOG2106|consensus	626		98.79
KOG0642|consensus	577		98.79
KOG0650|consensus	733		98.78
KOG1523|consensus	361		98.76
KOG0650|consensus	733		98.74
KOG1188|consensus	376		98.74
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.73
KOG1009|consensus	434		98.72
KOG2111|consensus	346		98.71
KOG1587|consensus	555		98.69
KOG0322|consensus	323		98.67
KOG2919|consensus	406		98.66
KOG1538|consensus	1081		98.63
KOG2139|consensus	445		98.63
KOG2695|consensus	425		98.61
KOG1523|consensus	361		98.6
KOG2919|consensus	406		98.6
KOG1063|consensus	764		98.6
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.57
KOG2139|consensus	445		98.53
KOG1517|consensus	1387		98.49
KOG1538|consensus	1081		98.49
KOG4547|consensus	541		98.45
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.45
KOG2321|consensus	703		98.45
PRK01742	429	tolB translocation protein TolB; Provisional	98.44
KOG1963|consensus	792		98.42
PRK11028	330	6-phosphogluconolactonase; Provisional	98.42
KOG4227|consensus	609		98.42
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.41
KOG4497|consensus	447		98.41
KOG0644|consensus	1113		98.41
PRK01742	429	tolB translocation protein TolB; Provisional	98.35
PRK11028	330	6-phosphogluconolactonase; Provisional	98.34
KOG1334|consensus	559		98.33
KOG2315|consensus	566		98.33
KOG4547|consensus	541		98.28
KOG1240|consensus	1431		98.26
KOG1524|consensus	737		98.26
KOG0280|consensus	339		98.25
KOG4227|consensus	609		98.25
KOG1963|consensus	792		98.24
KOG1064|consensus	2439		98.2
KOG1240|consensus	1431		98.19
PRK03629	429	tolB translocation protein TolB; Provisional	98.1
KOG1064|consensus	2439		98.09
KOG3914|consensus	390		98.08
PRK02889	427	tolB translocation protein TolB; Provisional	98.08
PRK04922	433	tolB translocation protein TolB; Provisional	98.06
KOG4532|consensus	344		98.05
PRK05137	435	tolB translocation protein TolB; Provisional	98.02
KOG3881|consensus	412		98.0
KOG2695|consensus	425		97.99
KOG4190|consensus	1034		97.99
KOG4497|consensus	447		97.96
KOG2321|consensus	703		97.96
PRK05137	435	tolB translocation protein TolB; Provisional	97.95
KOG4640|consensus	665		97.94
PRK02889	427	tolB translocation protein TolB; Provisional	97.93
KOG0309|consensus	1081		97.88
PRK04922	433	tolB translocation protein TolB; Provisional	97.8
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	97.78
KOG1409|consensus	404		97.73
KOG1334|consensus	559		97.7
COG4946	668	Uncharacterized protein related to the periplasmic	97.7
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.67
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.66
PRK03629	429	tolB translocation protein TolB; Provisional	97.62
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	97.61
PRK04792	448	tolB translocation protein TolB; Provisional	97.58
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	97.57
PRK00178	430	tolB translocation protein TolB; Provisional	97.56
KOG4190|consensus	1034		97.51
KOG1275|consensus	1118		97.45
KOG3914|consensus	390		97.43
PRK00178	430	tolB translocation protein TolB; Provisional	97.43
KOG1409|consensus	404		97.41
KOG2315|consensus	566		97.39
KOG4532|consensus	344		97.35
PRK04043	419	tolB translocation protein TolB; Provisional	97.33
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.33
KOG3617|consensus	1416		97.28
KOG3621|consensus	726		97.26
KOG1912|consensus	1062		97.22
KOG1645|consensus	463		97.2
KOG1354|consensus	433		97.17
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.16
PRK01029	428	tolB translocation protein TolB; Provisional	97.15
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.15
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.08
PRK04792	448	tolB translocation protein TolB; Provisional	97.02
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.01
KOG4714|consensus	319		97.0
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	96.96
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	96.93
KOG2041|consensus	1189		96.9
KOG2444|consensus	238		96.81
KOG1008|consensus	783		96.75
PRK01029	428	tolB translocation protein TolB; Provisional	96.75
KOG2314|consensus	698		96.75
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.72
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	96.67
KOG0309|consensus	1081		96.62
KOG4640|consensus	665		96.51
KOG2041|consensus	1189		96.51
KOG1275|consensus	1118		96.5
KOG2314|consensus	698		96.47
KOG0882|consensus	558		96.43
KOG1354|consensus	433		96.41
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	96.4
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	96.22
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.18
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	96.18
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	96.17
KOG2066|consensus	846		96.16
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.13
KOG1832|consensus	1516		96.05
KOG1912|consensus	1062		95.9
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	95.87
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	95.85
PRK02888	635	nitrous-oxide reductase; Validated	95.73
PRK02888	635	nitrous-oxide reductase; Validated	95.66
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.52
PRK04043	419	tolB translocation protein TolB; Provisional	95.5
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	95.39
KOG1920|consensus	1265		95.34
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.31
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	95.25
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	95.23
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	95.19
KOG2079|consensus	1206		95.05
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	95.03
KOG2395|consensus	644		94.99
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	94.97
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	94.93
KOG2066|consensus	846		94.9
COG4946	668	Uncharacterized protein related to the periplasmic	94.77
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	94.75
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	94.68
KOG2079|consensus	1206		94.66
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	94.53
KOG1645|consensus	463		94.42
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	94.3
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	94.25
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	94.14
KOG3630|consensus	1405		93.86
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	93.84
KOG2395|consensus	644		93.75
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	93.41
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.19
KOG1916|consensus	1283		92.11
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	91.99
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	91.7
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	91.63
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	91.59
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	91.54
KOG2114|consensus	933		91.44
KOG1008|consensus	783		91.44
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	91.19
KOG1920|consensus	1265		91.1
KOG0882|consensus	558		90.98
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	90.42
COG3391	381	Uncharacterized conserved protein [Function unknow	90.13
KOG4649|consensus	354		90.11
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	89.73
KOG4499|consensus	310		89.36
KOG4649|consensus	354		89.07
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	88.78
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	88.26
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	88.14
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	87.51
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	87.15
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	87.09
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	87.03
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	86.24
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	85.88
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	85.56
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	85.44
KOG3621|consensus	726		85.07
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	84.9
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	84.48
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	83.52
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	83.51
KOG3617|consensus	1416		82.92
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	81.89
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	81.72
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	81.59

>KOG0286|consensus

Probab=99.84  E-value=3e-20  Score=108.84  Aligned_cols=97  Identities=21%  Similarity=0.319  Sum_probs=86.8

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      +|.+.|.++-+||+.+++....+..  |...+..+...| ..+.   +++|+.|+..++||++.+.+.+.+.+|+    .
T Consensus       160 lT~SGD~TCalWDie~g~~~~~f~G--H~gDV~slsl~p~~~nt---FvSg~cD~~aklWD~R~~~c~qtF~ghe----s  230 (343)
T KOG0286|consen  160 LTGSGDMTCALWDIETGQQTQVFHG--HTGDVMSLSLSPSDGNT---FVSGGCDKSAKLWDVRSGQCVQTFEGHE----S  230 (343)
T ss_pred             EecCCCceEEEEEcccceEEEEecC--CcccEEEEecCCCCCCe---EEecccccceeeeeccCcceeEeecccc----c
Confidence            3678999999999999999777775  466677788888 4444   8999999999999999999999999999    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|+++.|.|+|.-+++|+.|++.++||
T Consensus       231 DINsv~ffP~G~afatGSDD~tcRlyD  257 (343)
T KOG0286|consen  231 DINSVRFFPSGDAFATGSDDATCRLYD  257 (343)
T ss_pred             ccceEEEccCCCeeeecCCCceeEEEe
Confidence            999999999999999999999999987

>KOG0263|consensus

Probab=99.83  E-value=6.2e-20  Score=117.75  Aligned_cols=96  Identities=18%  Similarity=0.310  Sum_probs=88.6

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +.+.|.+||+||..+|..++.+..  |.+.+.++.|+|.+.+   |++|+.|+.|++||+.++..+.++.+|.    +.+
T Consensus       552 TGSsD~tVRlWDv~~G~~VRiF~G--H~~~V~al~~Sp~Gr~---LaSg~ed~~I~iWDl~~~~~v~~l~~Ht----~ti  622 (707)
T KOG0263|consen  552 TGSSDRTVRLWDVSTGNSVRIFTG--HKGPVTALAFSPCGRY---LASGDEDGLIKIWDLANGSLVKQLKGHT----GTI  622 (707)
T ss_pred             cCCCCceEEEEEcCCCcEEEEecC--CCCceEEEEEcCCCce---EeecccCCcEEEEEcCCCcchhhhhccc----Cce
Confidence            467899999999999999888877  4666788999998877   9999999999999999999999999997    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++.|+.++.+|++|+.|.+|++||
T Consensus       623 ~SlsFS~dg~vLasgg~DnsV~lWD  647 (707)
T KOG0263|consen  623 YSLSFSRDGNVLASGGADNSVRLWD  647 (707)
T ss_pred             eEEEEecCCCEEEecCCCCeEEEEE
Confidence            9999999999999999999999997

>KOG0263|consensus

Probab=99.83  E-value=4.1e-20  Score=118.58  Aligned_cols=96  Identities=22%  Similarity=0.367  Sum_probs=88.9

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|++-++|......+++.+.+  |.+.+.++.|+|.+.+   +++||.|++||+||+.+|..++.+.+|.    +.|
T Consensus       510 tas~D~tArLWs~d~~~PlRifag--hlsDV~cv~FHPNs~Y---~aTGSsD~tVRlWDv~~G~~VRiF~GH~----~~V  580 (707)
T KOG0263|consen  510 TASHDQTARLWSTDHNKPLRIFAG--HLSDVDCVSFHPNSNY---VATGSSDRTVRLWDVSTGNSVRIFTGHK----GPV  580 (707)
T ss_pred             ecCCCceeeeeecccCCchhhhcc--cccccceEEECCcccc---cccCCCCceEEEEEcCCCcEEEEecCCC----Cce
Confidence            346799999999999888777777  4677888999999999   8999999999999999999999999999    999


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|||+|++|++|+.|+.|.+||
T Consensus       581 ~al~~Sp~Gr~LaSg~ed~~I~iWD  605 (707)
T KOG0263|consen  581 TALAFSPCGRYLASGDEDGLIKIWD  605 (707)
T ss_pred             EEEEEcCCCceEeecccCCcEEEEE
Confidence            9999999999999999999999997

>KOG0266|consensus

Probab=99.82  E-value=1.5e-19  Score=114.35  Aligned_cols=96  Identities=21%  Similarity=0.415  Sum_probs=85.2

Q ss_pred             CcCCCceEEEEeC-ccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTL-LELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      +...|++|+|||+ ..+..+..+..  |...+.++.|+|.++.   +++|+.|++|++||++++++++.+.+|.    ..
T Consensus       220 s~s~D~tiriwd~~~~~~~~~~l~g--H~~~v~~~~f~p~g~~---i~Sgs~D~tvriWd~~~~~~~~~l~~hs----~~  290 (456)
T KOG0266|consen  220 SGSDDKTLRIWDLKDDGRNLKTLKG--HSTYVTSVAFSPDGNL---LVSGSDDGTVRIWDVRTGECVRKLKGHS----DG  290 (456)
T ss_pred             EecCCceEEEeeccCCCeEEEEecC--CCCceEEEEecCCCCE---EEEecCCCcEEEEeccCCeEEEeeeccC----Cc
Confidence            4578999999999 44566555554  5667788999999966   8999999999999999999999999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++|++++.++++++.|+.+++||
T Consensus       291 is~~~f~~d~~~l~s~s~d~~i~vwd  316 (456)
T KOG0266|consen  291 ISGLAFSPDGNLLVSASYDGTIRVWD  316 (456)
T ss_pred             eEEEEECCCCCEEEEcCCCccEEEEE
Confidence            99999999999999999999999997

>KOG0272|consensus

Probab=99.82  E-value=3.4e-20  Score=112.70  Aligned_cols=95  Identities=18%  Similarity=0.231  Sum_probs=85.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..-|..-+|||++++.++.-+..  |...+..+.|+|.+..   ++||+.|++++|||++..+++.++++|.    +-|.
T Consensus       321 GGlD~~~RvWDlRtgr~im~L~g--H~k~I~~V~fsPNGy~---lATgs~Dnt~kVWDLR~r~~ly~ipAH~----nlVS  391 (459)
T KOG0272|consen  321 GGLDSLGRVWDLRTGRCIMFLAG--HIKEILSVAFSPNGYH---LATGSSDNTCKVWDLRMRSELYTIPAHS----NLVS  391 (459)
T ss_pred             cCccchhheeecccCcEEEEecc--cccceeeEeECCCceE---EeecCCCCcEEEeeecccccceeccccc----chhh
Confidence            45677789999999999665555  5677888999999988   9999999999999999999999999999    8999


Q ss_pred             EEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.|+| .|.+|++++.|+++++|.
T Consensus       392 ~Vk~~p~~g~fL~TasyD~t~kiWs  416 (459)
T KOG0272|consen  392 QVKYSPQEGYFLVTASYDNTVKIWS  416 (459)
T ss_pred             heEecccCCeEEEEcccCcceeeec
Confidence            999999 788899999999999994

>KOG0272|consensus

Probab=99.81  E-value=3.1e-20  Score=112.82  Aligned_cols=94  Identities=22%  Similarity=0.321  Sum_probs=85.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .-|.+=++||+.++..  .+..+.|...+..+.|.+++..   ++||+.|..-++||+++|.++-.+.+|.    ..|..
T Consensus       280 sfD~tWRlWD~~tk~E--lL~QEGHs~~v~~iaf~~DGSL---~~tGGlD~~~RvWDlRtgr~im~L~gH~----k~I~~  350 (459)
T KOG0272|consen  280 SFDSTWRLWDLETKSE--LLLQEGHSKGVFSIAFQPDGSL---AATGGLDSLGRVWDLRTGRCIMFLAGHI----KEILS  350 (459)
T ss_pred             ccccchhhcccccchh--hHhhcccccccceeEecCCCce---eeccCccchhheeecccCcEEEEecccc----cceee
Confidence            4577889999999987  4455556677888999999998   8999999999999999999999999998    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|+|..+++|+.|++++|||
T Consensus       351 V~fsPNGy~lATgs~Dnt~kVWD  373 (459)
T KOG0272|consen  351 VAFSPNGYHLATGSSDNTCKVWD  373 (459)
T ss_pred             EeECCCceEEeecCCCCcEEEee
Confidence            99999999999999999999997

>KOG0271|consensus

Probab=99.81  E-value=9.3e-20  Score=110.13  Aligned_cols=96  Identities=19%  Similarity=0.286  Sum_probs=83.4

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~   80 (106)
                      +...|.++|+||+.+..+  .+.+..|...+.++.|+|++..   +++|+.||+|++||.++|++ .+.+.+|.    ..
T Consensus       132 tGsGD~TvR~WD~~TeTp--~~t~KgH~~WVlcvawsPDgk~---iASG~~dg~I~lwdpktg~~~g~~l~gH~----K~  202 (480)
T KOG0271|consen  132 TGSGDTTVRLWDLDTETP--LFTCKGHKNWVLCVAWSPDGKK---IASGSKDGSIRLWDPKTGQQIGRALRGHK----KW  202 (480)
T ss_pred             ecCCCceEEeeccCCCCc--ceeecCCccEEEEEEECCCcch---hhccccCCeEEEecCCCCCcccccccCcc----cc
Confidence            457899999999999998  4444446667888999999999   89999999999999999875 56788898    89


Q ss_pred             eEEEEEcC-----CCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHP-----SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~-----~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++|.|     .++.+++++.||.++|||
T Consensus       203 It~Lawep~hl~p~~r~las~skDg~vrIWd  233 (480)
T KOG0271|consen  203 ITALAWEPLHLVPPCRRLASSSKDGSVRIWD  233 (480)
T ss_pred             eeEEeecccccCCCccceecccCCCCEEEEE
Confidence            99999975     667899999999999997

>KOG0285|consensus

Probab=99.81  E-value=1.5e-19  Score=108.61  Aligned_cols=96  Identities=16%  Similarity=0.256  Sum_probs=84.7

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|++|.|||+.++++...+..  |-..+..+.+++...+   +++++.|+.|+.||+...+.++.+.+|-    ..|
T Consensus       168 tgs~DrtikIwDlatg~LkltltG--hi~~vr~vavS~rHpY---lFs~gedk~VKCwDLe~nkvIR~YhGHl----S~V  238 (460)
T KOG0285|consen  168 TGSADRTIKIWDLATGQLKLTLTG--HIETVRGVAVSKRHPY---LFSAGEDKQVKCWDLEYNKVIRHYHGHL----SGV  238 (460)
T ss_pred             ecCCCceeEEEEcccCeEEEeecc--hhheeeeeeecccCce---EEEecCCCeeEEEechhhhhHHHhcccc----cee
Confidence            467899999999999999444444  3444556778888877   8999999999999999999999999999    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++.+|....+++|++|.++++||
T Consensus       239 ~~L~lhPTldvl~t~grDst~RvWD  263 (460)
T KOG0285|consen  239 YCLDLHPTLDVLVTGGRDSTIRVWD  263 (460)
T ss_pred             EEEeccccceeEEecCCcceEEEee
Confidence            9999999999999999999999998

>KOG0284|consensus

Probab=99.81  E-value=1.9e-19  Score=109.22  Aligned_cols=96  Identities=18%  Similarity=0.356  Sum_probs=86.7

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +++.||+|+|||....+....+.  .|.-.+.++.|+|....   +++++.|..|++||.+++.|+.++..|.    ..|
T Consensus       197 t~SdDg~ikiWdf~~~kee~vL~--GHgwdVksvdWHP~kgL---iasgskDnlVKlWDprSg~cl~tlh~HK----ntV  267 (464)
T KOG0284|consen  197 TCSDDGTIKIWDFRMPKEERVLR--GHGWDVKSVDWHPTKGL---IASGSKDNLVKLWDPRSGSCLATLHGHK----NTV  267 (464)
T ss_pred             EecCCCeEEEEeccCCchhheec--cCCCCcceeccCCccce---eEEccCCceeEeecCCCcchhhhhhhcc----ceE
Confidence            57899999999999887744443  35667889999999988   8999999999999999999999999998    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.|+|++++|+++|+|..++++|
T Consensus       268 l~~~f~~n~N~Llt~skD~~~kv~D  292 (464)
T KOG0284|consen  268 LAVKFNPNGNWLLTGSKDQSCKVFD  292 (464)
T ss_pred             EEEEEcCCCCeeEEccCCceEEEEe
Confidence            9999999999999999999999987

>KOG0302|consensus

Probab=99.80  E-value=3.7e-19  Score=107.21  Aligned_cols=98  Identities=19%  Similarity=0.311  Sum_probs=83.0

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---ccchheeccccccCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---KTCVQEITAHRKKFD   78 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~   78 (106)
                      +++.||+|+|||++.+..-.......|++.++.++|+.....   |++|+.||+++|||+++   ++++.++.-|.    
T Consensus       275 ScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~l---LasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk----  347 (440)
T KOG0302|consen  275 SCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPL---LASGGDDGTLSIWDLRQFKSGQPVATFKYHK----  347 (440)
T ss_pred             eeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcce---eeecCCCceEEEEEhhhccCCCcceeEEecc----
Confidence            478999999999998844334444567788899999998885   89999999999999985   46788888888    


Q ss_pred             CCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|+++.|+| +...+++++.|..|.+||
T Consensus       348 ~pItsieW~p~e~s~iaasg~D~QitiWD  376 (440)
T KOG0302|consen  348 APITSIEWHPHEDSVIAASGEDNQITIWD  376 (440)
T ss_pred             CCeeEEEeccccCceEEeccCCCcEEEEE
Confidence            8999999999 455689999999999997

>KOG0264|consensus

Probab=99.79  E-value=1.3e-18  Score=106.15  Aligned_cols=98  Identities=17%  Similarity=0.323  Sum_probs=83.0

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|+.+.|||+++++.-.......|...+.++.|+|.+...  |+||+.|++|++||+++ .+++..+.+|.    ..|
T Consensus       246 v~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~i--lAT~S~D~tV~LwDlRnL~~~lh~~e~H~----dev  319 (422)
T KOG0264|consen  246 VGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFI--LATGSADKTVALWDLRNLNKPLHTFEGHE----DEV  319 (422)
T ss_pred             ecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCce--EEeccCCCcEEEeechhcccCceeccCCC----cce
Confidence            457899999999964222245555677889999999999876  89999999999999998 46788899998    999


Q ss_pred             EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+.|+| ....++|++.|+.+.+||
T Consensus       320 ~~V~WSPh~etvLASSg~D~rl~vWD  345 (422)
T KOG0264|consen  320 FQVEWSPHNETVLASSGTDRRLNVWD  345 (422)
T ss_pred             EEEEeCCCCCceeEecccCCcEEEEe
Confidence            9999999 556799999999999997

>KOG0279|consensus

Probab=99.78  E-value=3.1e-18  Score=99.83  Aligned_cols=99  Identities=19%  Similarity=0.293  Sum_probs=81.6

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +.++|.+|.+||+..+.... .....+...+.++.|+|...... +++++.|++|++||+++.+....+.+|.    ..+
T Consensus       122 SGSrDkTiklwnt~g~ck~t-~~~~~~~~WVscvrfsP~~~~p~-Ivs~s~DktvKvWnl~~~~l~~~~~gh~----~~v  195 (315)
T KOG0279|consen  122 SGSRDKTIKLWNTLGVCKYT-IHEDSHREWVSCVRFSPNESNPI-IVSASWDKTVKVWNLRNCQLRTTFIGHS----GYV  195 (315)
T ss_pred             cCCCcceeeeeeecccEEEE-EecCCCcCcEEEEEEcCCCCCcE-EEEccCCceEEEEccCCcchhhcccccc----ccE
Confidence            46789999999998655422 22222255677799999852222 6999999999999999999889999998    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+++||||...++|+.||.+.+||
T Consensus       196 ~t~~vSpDGslcasGgkdg~~~Lwd  220 (315)
T KOG0279|consen  196 NTVTVSPDGSLCASGGKDGEAMLWD  220 (315)
T ss_pred             EEEEECCCCCEEecCCCCceEEEEE
Confidence            9999999999999999999999997

>PTZ00421 coronin; Provisional

Probab=99.78  E-value=3.7e-18  Score=108.67  Aligned_cols=98  Identities=13%  Similarity=0.217  Sum_probs=79.7

Q ss_pred             cCCCceEEEEeCccCceee-----ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135          3 KVPSSVIYIWTLLELQTYA-----RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      ...|++|++||+.++....     ......|...+..+.|+|.....  +++++.|+.|++||+++++.+..+..|.   
T Consensus        94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~i--LaSgs~DgtVrIWDl~tg~~~~~l~~h~---  168 (493)
T PTZ00421         94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNV--LASAGADMVVNVWDVERGKAVEVIKCHS---  168 (493)
T ss_pred             EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCE--EEEEeCCCEEEEEECCCCeEEEEEcCCC---
Confidence            4679999999998653210     11223355567779999976433  7999999999999999998888888888   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ..|.+++|+|++..+++++.|++|++||
T Consensus       169 -~~V~sla~spdG~lLatgs~Dg~IrIwD  196 (493)
T PTZ00421        169 -DQITSLEWNLDGSLLCTTSKDKKLNIID  196 (493)
T ss_pred             -CceEEEEEECCCCEEEEecCCCEEEEEE
Confidence             8999999999999999999999999997

>KOG0273|consensus

Probab=99.77  E-value=3e-18  Score=105.59  Aligned_cols=99  Identities=19%  Similarity=0.439  Sum_probs=85.3

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC------ceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI------SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      +++.|++++||.+.....  ...++.|...+.++.|+|.+..      +..+++++.|++|++||+..+.++..+..|. 
T Consensus       376 S~SdD~TlkiWs~~~~~~--~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~-  452 (524)
T KOG0273|consen  376 SCSDDGTLKIWSMGQSNS--VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ-  452 (524)
T ss_pred             EecCCCeeEeeecCCCcc--hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC-
Confidence            578999999999988777  4444446767888888886542      2347999999999999999999999998898 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.+++|+|+++++++|+.|+.|.+|+
T Consensus       453 ---~pVysvafS~~g~ylAsGs~dg~V~iws  480 (524)
T KOG0273|consen  453 ---EPVYSVAFSPNGRYLASGSLDGCVHIWS  480 (524)
T ss_pred             ---CceEEEEecCCCcEEEecCCCCeeEecc
Confidence               8999999999999999999999999995

>KOG0276|consensus

Probab=99.77  E-value=3.1e-18  Score=108.77  Aligned_cols=97  Identities=20%  Similarity=0.401  Sum_probs=85.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..=|++|++|.+....+  .+..+.|..+++++.|.+-+... +++||+.|.++++||.++.+|++++.+|.    ..|.
T Consensus       159 ~sLDrTVKVWslgs~~~--nfTl~gHekGVN~Vdyy~~gdkp-ylIsgaDD~tiKvWDyQtk~CV~TLeGHt----~Nvs  231 (794)
T KOG0276|consen  159 ASLDRTVKVWSLGSPHP--NFTLEGHEKGVNCVDYYTGGDKP-YLISGADDLTIKVWDYQTKSCVQTLEGHT----NNVS  231 (794)
T ss_pred             eeccccEEEEEcCCCCC--ceeeeccccCcceEEeccCCCcc-eEEecCCCceEEEeecchHHHHHHhhccc----ccce
Confidence            34589999999988887  56666678889999998876443 26999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.|+|.-++++||+.||+++||.
T Consensus       232 ~v~fhp~lpiiisgsEDGTvriWh  255 (794)
T KOG0276|consen  232 FVFFHPELPIIISGSEDGTVRIWN  255 (794)
T ss_pred             EEEecCCCcEEEEecCCccEEEec
Confidence            999999999999999999999994

>KOG0279|consensus

Probab=99.76  E-value=1.1e-17  Score=97.66  Aligned_cols=97  Identities=22%  Similarity=0.263  Sum_probs=79.1

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|+++++||+.+++...++..  |...+.+++++++...   +++|+.|.++++|+.... +..++.....  ++-|
T Consensus        80 S~swD~~lrlWDl~~g~~t~~f~G--H~~dVlsva~s~dn~q---ivSGSrDkTiklwnt~g~-ck~t~~~~~~--~~WV  151 (315)
T KOG0279|consen   80 SASWDGTLRLWDLATGESTRRFVG--HTKDVLSVAFSTDNRQ---IVSGSRDKTIKLWNTLGV-CKYTIHEDSH--REWV  151 (315)
T ss_pred             eccccceEEEEEecCCcEEEEEEe--cCCceEEEEecCCCce---eecCCCcceeeeeeeccc-EEEEEecCCC--cCcE
Confidence            346799999999999988666666  4666888999999888   899999999999999644 4444433321  1789


Q ss_pred             EEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                      .|+.|+|+  ..+|++++.|+++++||
T Consensus       152 scvrfsP~~~~p~Ivs~s~DktvKvWn  178 (315)
T KOG0279|consen  152 SCVRFSPNESNPIIVSASWDKTVKVWN  178 (315)
T ss_pred             EEEEEcCCCCCcEEEEccCCceEEEEc
Confidence            99999997  77899999999999997

>KOG0295|consensus

Probab=99.76  E-value=8.3e-18  Score=100.98  Aligned_cols=95  Identities=19%  Similarity=0.342  Sum_probs=86.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.++.++..+..  |...+..++|+|.+.+   ++++..|+++++||+++++|++.+++|+    ..+.
T Consensus       310 ~SrDktIk~wdv~tg~cL~tL~g--hdnwVr~~af~p~Gky---i~ScaDDktlrvwdl~~~~cmk~~~ah~----hfvt  380 (406)
T KOG0295|consen  310 GSRDKTIKIWDVSTGMCLFTLVG--HDNWVRGVAFSPGGKY---ILSCADDKTLRVWDLKNLQCMKTLEAHE----HFVT  380 (406)
T ss_pred             ecccceEEEEeccCCeEEEEEec--ccceeeeeEEcCCCeE---EEEEecCCcEEEEEeccceeeeccCCCc----ceeE
Confidence            46899999999999999666555  5667788999999888   8999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+.+..++++|+.|.++++|.
T Consensus       381 ~lDfh~~~p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  381 SLDFHKTAPYVVTGSVDQTVKVWE  404 (406)
T ss_pred             EEecCCCCceEEeccccceeeeee
Confidence            999999999999999999999984

>KOG0286|consensus

Probab=99.75  E-value=1.7e-17  Score=97.41  Aligned_cols=98  Identities=16%  Similarity=0.147  Sum_probs=86.1

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|++.++||++.+.+...|..  |...++.+.|.|.+..   +++|+.|+++++||++..+.+..+......  .+|
T Consensus       204 Sg~cD~~aklWD~R~~~c~qtF~g--hesDINsv~ffP~G~a---fatGSDD~tcRlyDlRaD~~~a~ys~~~~~--~gi  276 (343)
T KOG0286|consen  204 SGGCDKSAKLWDVRSGQCVQTFEG--HESDINSVRFFPSGDA---FATGSDDATCRLYDLRADQELAVYSHDSII--CGI  276 (343)
T ss_pred             ecccccceeeeeccCcceeEeecc--cccccceEEEccCCCe---eeecCCCceeEEEeecCCcEEeeeccCccc--CCc
Confidence            456799999999999999666666  5778999999999998   899999999999999999888887744432  689


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++++||..|++|++|..|.++.+||
T Consensus       277 tSv~FS~SGRlLfagy~d~~c~vWD  301 (343)
T KOG0286|consen  277 TSVAFSKSGRLLFAGYDDFTCNVWD  301 (343)
T ss_pred             eeEEEcccccEEEeeecCCceeEee
Confidence            9999999999999999999999997

>KOG0319|consensus

Probab=99.75  E-value=1.3e-17  Score=107.10  Aligned_cols=97  Identities=18%  Similarity=0.333  Sum_probs=89.6

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ||+++|++|+||.+.++.++.++..  |.+.+..+.|...+..   +++++.||.+++|+++++.|+.++.+|.    +.
T Consensus       521 aT~SgD~TvKIW~is~fSClkT~eG--H~~aVlra~F~~~~~q---liS~~adGliKlWnikt~eC~~tlD~H~----Dr  591 (775)
T KOG0319|consen  521 ATCSGDKTVKIWSISTFSCLKTFEG--HTSAVLRASFIRNGKQ---LISAGADGLIKLWNIKTNECEMTLDAHN----DR  591 (775)
T ss_pred             EeccCCceEEEEEeccceeeeeecC--ccceeEeeeeeeCCcE---EEeccCCCcEEEEeccchhhhhhhhhcc----ce
Confidence            5789999999999999999888877  4566777999999988   8999999999999999999999999999    99


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |++++-+|....+++|+.|+.+.+|.
T Consensus       592 vWaL~~~~~~~~~~tgg~Dg~i~~wk  617 (775)
T KOG0319|consen  592 VWALSVSPLLDMFVTGGGDGRIIFWK  617 (775)
T ss_pred             eEEEeecCccceeEecCCCeEEEEee
Confidence            99999999999999999999999984

>KOG0271|consensus

Probab=99.75  E-value=7.5e-18  Score=102.02  Aligned_cols=93  Identities=15%  Similarity=0.268  Sum_probs=84.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      =|..|++||.++|+.+..+..  |-..+..+.|+.++..   +++|+.|.++++|++++.+....+++|.    +.|+++
T Consensus       387 FDkSVkLW~g~tGk~lasfRG--Hv~~VYqvawsaDsRL---lVS~SkDsTLKvw~V~tkKl~~DLpGh~----DEVf~v  457 (480)
T KOG0271|consen  387 FDKSVKLWDGRTGKFLASFRG--HVAAVYQVAWSADSRL---LVSGSKDSTLKVWDVRTKKLKQDLPGHA----DEVFAV  457 (480)
T ss_pred             cccceeeeeCCCcchhhhhhh--ccceeEEEEeccCccE---EEEcCCCceEEEEEeeeeeecccCCCCC----ceEEEE
Confidence            478999999999998666665  3455677999998888   8999999999999999999999999999    999999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|+|||..+++|+.|..+++|.
T Consensus       458 DwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  458 DWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             EecCCCceeecCCCceEEEeec
Confidence            9999999999999999999994

>KOG0316|consensus

Probab=99.74  E-value=1.3e-17  Score=95.71  Aligned_cols=97  Identities=12%  Similarity=0.206  Sum_probs=84.5

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      +++.+|.+|++||...+.++..+..+.+  ++..+.-..+...   +++|+.|+.+.+||+.+|+.++.+.+|.    ..
T Consensus        33 ltcGsdrtvrLWNp~rg~liktYsghG~--EVlD~~~s~Dnsk---f~s~GgDk~v~vwDV~TGkv~Rr~rgH~----aq  103 (307)
T KOG0316|consen   33 LTCGSDRTVRLWNPLRGALIKTYSGHGH--EVLDAALSSDNSK---FASCGGDKAVQVWDVNTGKVDRRFRGHL----AQ  103 (307)
T ss_pred             EEcCCCceEEeecccccceeeeecCCCc--eeeeccccccccc---cccCCCCceEEEEEcccCeeeeeccccc----ce
Confidence            3678999999999999999888887432  3444444455555   7999999999999999999999999999    99


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |+.++|+.+...++||+-|.++++||
T Consensus       104 VNtV~fNeesSVv~SgsfD~s~r~wD  129 (307)
T KOG0316|consen  104 VNTVRFNEESSVVASGSFDSSVRLWD  129 (307)
T ss_pred             eeEEEecCcceEEEeccccceeEEEE
Confidence            99999999999999999999999997

>KOG0275|consensus

Probab=99.74  E-value=5.4e-18  Score=101.34  Aligned_cols=96  Identities=20%  Similarity=0.280  Sum_probs=88.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..-||.|++|.+.+|.++.++... |..++.++.|+.++..   +++++.|.++++--+++|++++.+.+|.    ..|+
T Consensus       281 GsqDGkIKvWri~tG~ClRrFdrA-HtkGvt~l~FSrD~Sq---iLS~sfD~tvRiHGlKSGK~LKEfrGHs----Syvn  352 (508)
T KOG0275|consen  281 GSQDGKIKVWRIETGQCLRRFDRA-HTKGVTCLSFSRDNSQ---ILSASFDQTVRIHGLKSGKCLKEFRGHS----SYVN  352 (508)
T ss_pred             cCcCCcEEEEEEecchHHHHhhhh-hccCeeEEEEccCcch---hhcccccceEEEeccccchhHHHhcCcc----cccc
Confidence            456999999999999999998875 3456888999999888   8999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...|.++|..+++++.||+|++|+
T Consensus       353 ~a~ft~dG~~iisaSsDgtvkvW~  376 (508)
T KOG0275|consen  353 EATFTDDGHHIISASSDGTVKVWH  376 (508)
T ss_pred             ceEEcCCCCeEEEecCCccEEEec
Confidence            999999999999999999999996

>KOG0295|consensus

Probab=99.74  E-value=3.1e-17  Score=98.57  Aligned_cols=99  Identities=18%  Similarity=0.296  Sum_probs=81.0

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC------------CceEEEeeCCCCcEEEeeCCCccchhe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN------------ISLFDSRPGHDCSIRLWNLDNKTCVQE   69 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~s~~~d~~v~iwd~~~~~~~~~   69 (106)
                      ++.+|.+|++|-+.++++...+..  |.-.+.++.|-|...            .+.++++++.|++|++||+.++.++-+
T Consensus       252 s~s~dqtl~vW~~~t~~~k~~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~t  329 (406)
T KOG0295|consen  252 SCSNDQTLRVWVVATKQCKAELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFT  329 (406)
T ss_pred             ecCCCceEEEEEeccchhhhhhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEE
Confidence            367899999999999977333333  332345566655422            234689999999999999999999999


Q ss_pred             eccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+|.    ..|..++|+|.|++|+|+..|+++++||
T Consensus       330 L~ghd----nwVr~~af~p~Gkyi~ScaDDktlrvwd  362 (406)
T KOG0295|consen  330 LVGHD----NWVRGVAFSPGGKYILSCADDKTLRVWD  362 (406)
T ss_pred             Eeccc----ceeeeeEEcCCCeEEEEEecCCcEEEEE
Confidence            99999    8999999999999999999999999997

>KOG0269|consensus

Probab=99.72  E-value=3.6e-17  Score=105.63  Aligned_cols=97  Identities=18%  Similarity=0.375  Sum_probs=82.9

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~   80 (106)
                      +.+.||+|++||++..+....+...  ...+..+.|+|.....  ++++...|.+++||++.. ++..++.+|.    +.
T Consensus       151 SGSQDg~vK~~DlR~~~S~~t~~~n--SESiRDV~fsp~~~~~--F~s~~dsG~lqlWDlRqp~r~~~k~~AH~----Gp  222 (839)
T KOG0269|consen  151 SGSQDGTVKCWDLRSKKSKSTFRSN--SESIRDVKFSPGYGNK--FASIHDSGYLQLWDLRQPDRCEKKLTAHN----GP  222 (839)
T ss_pred             ecCCCceEEEEeeeccccccccccc--chhhhceeeccCCCce--EEEecCCceEEEeeccCchhHHHHhhccc----Cc
Confidence            4578999999999988875555552  2346679999987665  799999999999999974 6788999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.|+.|+|++.+||+||+|+.|+|||
T Consensus       223 V~c~nwhPnr~~lATGGRDK~vkiWd  248 (839)
T KOG0269|consen  223 VLCLNWHPNREWLATGGRDKMVKIWD  248 (839)
T ss_pred             eEEEeecCCCceeeecCCCccEEEEe
Confidence            99999999999999999999999997

>KOG0277|consensus

Probab=99.71  E-value=1.8e-17  Score=95.90  Aligned_cols=96  Identities=21%  Similarity=0.301  Sum_probs=81.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v   81 (106)
                      .+.|+++++||++....  ....+.|+.++.+|.|+......  ++||+.|+.|++||+++ ..++..+.+|.    -.|
T Consensus       166 ~Sgd~~l~lwdvr~~gk--~~~i~ah~~Eil~cdw~ky~~~v--l~Tg~vd~~vr~wDir~~r~pl~eL~gh~----~AV  237 (311)
T KOG0277|consen  166 ASGDGTLRLWDVRSPGK--FMSIEAHNSEILCCDWSKYNHNV--LATGGVDNLVRGWDIRNLRTPLFELNGHG----LAV  237 (311)
T ss_pred             ccCCceEEEEEecCCCc--eeEEEeccceeEeecccccCCcE--EEecCCCceEEEEehhhccccceeecCCc----eEE
Confidence            46899999999986543  33355567789999999998886  89999999999999997 46788899998    899


Q ss_pred             EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      ..++||| ....|+|++.|-+++|||
T Consensus       238 Rkvk~Sph~~~lLaSasYDmT~riw~  263 (311)
T KOG0277|consen  238 RKVKFSPHHASLLASASYDMTVRIWD  263 (311)
T ss_pred             EEEecCcchhhHhhhccccceEEecc
Confidence            9999999 455799999999999997

>KOG0266|consensus

Probab=99.71  E-value=9e-17  Score=101.91  Aligned_cols=94  Identities=19%  Similarity=0.389  Sum_probs=81.3

Q ss_pred             CCCceEEEEeCccCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC-CCccchheeccccccCCCC
Q psy17135          4 VPSSVIYIWTLLELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL-DNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~-~~~~~~~~~~~~~~~~~~~   80 (106)
                      ..|+.+++|++.+.+  .+...  ..|...+..+.|.|.+..   +++++.|+++++||+ ..+.+++.+.+|.    ..
T Consensus       178 ~~~~~i~~~~~~~~~~~~~~~l--~~h~~~v~~~~fs~d~~~---l~s~s~D~tiriwd~~~~~~~~~~l~gH~----~~  248 (456)
T KOG0266|consen  178 SSDGLIRIWKLEGIKSNLLREL--SGHTRGVSDVAFSPDGSY---LLSGSDDKTLRIWDLKDDGRNLKTLKGHS----TY  248 (456)
T ss_pred             cCCCcEEEeecccccchhhccc--cccccceeeeEECCCCcE---EEEecCCceEEEeeccCCCeEEEEecCCC----Cc
Confidence            468999999997766  32222  446667888999999997   899999999999999 4568899999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |++++|+|+++.+++|+.|++|++||
T Consensus       249 v~~~~f~p~g~~i~Sgs~D~tvriWd  274 (456)
T KOG0266|consen  249 VTSVAFSPDGNLLVSGSDDGTVRIWD  274 (456)
T ss_pred             eEEEEecCCCCEEEEecCCCcEEEEe
Confidence            99999999999999999999999997

>KOG0293|consensus

Probab=99.71  E-value=1.2e-17  Score=101.95  Aligned_cols=97  Identities=15%  Similarity=0.221  Sum_probs=75.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..+..|++||++..+.+.++.++.....+....|--..  ..|+++|++|+.|+||+..+|+++..+.+|.    ..|++
T Consensus       414 L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~--~~fiaSGSED~kvyIWhr~sgkll~~LsGHs----~~vNc  487 (519)
T KOG0293|consen  414 LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGN--DKFIASGSEDSKVYIWHRISGKLLAVLSGHS----KTVNC  487 (519)
T ss_pred             cccCeeEEeecchhhHHHHhhcccccceEEEeccCCCC--cceEEecCCCceEEEEEccCCceeEeecCCc----ceeeE
Confidence            45778999999987776666664322212222232222  2448999999999999999999999999999    89999


Q ss_pred             EEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+| +-..+||++.||+|+||-
T Consensus       488 VswNP~~p~m~ASasDDgtIRIWg  511 (519)
T KOG0293|consen  488 VSWNPADPEMFASASDDGTIRIWG  511 (519)
T ss_pred             EecCCCCHHHhhccCCCCeEEEec
Confidence            99999 445699999999999993

>KOG0296|consensus

Probab=99.71  E-value=9.3e-17  Score=96.52  Aligned_cols=91  Identities=21%  Similarity=0.297  Sum_probs=82.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      =||+|.|||+...+.  +..+++.. .+..+.|.+ ..+   +++++.+|.|+.||.++|+++..+.+|.    ..|.++
T Consensus       306 vdG~i~iyD~a~~~~--R~~c~he~-~V~~l~w~~-t~~---l~t~c~~g~v~~wDaRtG~l~~~y~GH~----~~Il~f  374 (399)
T KOG0296|consen  306 VDGTIAIYDLAASTL--RHICEHED-GVTKLKWLN-TDY---LLTACANGKVRQWDARTGQLKFTYTGHQ----MGILDF  374 (399)
T ss_pred             ccceEEEEecccchh--heeccCCC-ceEEEEEcC-cch---heeeccCceEEeeeccccceEEEEecCc----hheeEE
Confidence            489999999999888  77777544 477899999 667   7999999999999999999999999999    899999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+.+.++++|.|++.++|+
T Consensus       375 ~ls~~~~~vvT~s~D~~a~VF~  396 (399)
T KOG0296|consen  375 ALSPQKRLVVTVSDDNTALVFE  396 (399)
T ss_pred             EEcCCCcEEEEecCCCeEEEEe
Confidence            9999999999999999999985

>KOG0277|consensus

Probab=99.71  E-value=3.1e-17  Score=94.90  Aligned_cols=98  Identities=19%  Similarity=0.258  Sum_probs=81.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...||+++|||+..... .....++|..++.++.|++.....  +++++.|++||+|+..-.+.+.++.+|.    ..|
T Consensus        78 ~a~GDGSLrl~d~~~~s~-Pi~~~kEH~~EV~Svdwn~~~r~~--~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~----~~I  150 (311)
T KOG0277|consen   78 AASGDGSLRLFDLTMPSK-PIHKFKEHKREVYSVDWNTVRRRI--FLTSSWDGTIKLWDPNRPNSVQTFNGHN----SCI  150 (311)
T ss_pred             EEecCceEEEeccCCCCc-chhHHHhhhhheEEecccccccee--EEeeccCCceEeecCCCCcceEeecCCc----cEE
Confidence            467899999999653322 223344566778889999987776  6788999999999999899999999998    899


Q ss_pred             EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      ....|+| ....+++++.|++.++||
T Consensus       151 y~a~~sp~~~nlfas~Sgd~~l~lwd  176 (311)
T KOG0277|consen  151 YQAAFSPHIPNLFASASGDGTLRLWD  176 (311)
T ss_pred             EEEecCCCCCCeEEEccCCceEEEEE
Confidence            9999999 677899999999999997

>KOG0291|consensus

Probab=99.71  E-value=1.2e-16  Score=103.33  Aligned_cols=94  Identities=14%  Similarity=0.268  Sum_probs=85.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..-|++.+|+.++-.-  .++.+.|.....++.++|+++.   ++||++|+.|++||...+.|..++..|.    ..|+.
T Consensus       327 ~klgQLlVweWqsEsY--VlKQQgH~~~i~~l~YSpDgq~---iaTG~eDgKVKvWn~~SgfC~vTFteHt----s~Vt~  397 (893)
T KOG0291|consen  327 SKLGQLLVWEWQSESY--VLKQQGHSDRITSLAYSPDGQL---IATGAEDGKVKVWNTQSGFCFVTFTEHT----SGVTA  397 (893)
T ss_pred             CccceEEEEEeeccce--eeeccccccceeeEEECCCCcE---EEeccCCCcEEEEeccCceEEEEeccCC----CceEE
Confidence            3457899999987665  6666667778899999999998   8999999999999999999999999999    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|+..++.++++|-||+|+.||
T Consensus       398 v~f~~~g~~llssSLDGtVRAwD  420 (893)
T KOG0291|consen  398 VQFTARGNVLLSSSLDGTVRAWD  420 (893)
T ss_pred             EEEEecCCEEEEeecCCeEEeee
Confidence            99999999999999999999997

>KOG0291|consensus

Probab=99.71  E-value=7.4e-17  Score=104.24  Aligned_cols=96  Identities=16%  Similarity=0.329  Sum_probs=82.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ..=||+|+.||++.++....+..+... ...+++..|.+..   ++.|+.|.. |++|++++|+.+-.+.+|+    +.|
T Consensus       410 sSLDGtVRAwDlkRYrNfRTft~P~p~-QfscvavD~sGel---V~AG~~d~F~IfvWS~qTGqllDiLsGHE----gPV  481 (893)
T KOG0291|consen  410 SSLDGTVRAWDLKRYRNFRTFTSPEPI-QFSCVAVDPSGEL---VCAGAQDSFEIFVWSVQTGQLLDILSGHE----GPV  481 (893)
T ss_pred             eecCCeEEeeeecccceeeeecCCCce-eeeEEEEcCCCCE---EEeeccceEEEEEEEeecCeeeehhcCCC----Ccc
Confidence            345999999999999999999887544 3555666666665   677777754 8999999999999999999    999


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|++..|+|++.|.+|++||
T Consensus       482 s~l~f~~~~~~LaS~SWDkTVRiW~  506 (893)
T KOG0291|consen  482 SGLSFSPDGSLLASGSWDKTVRIWD  506 (893)
T ss_pred             eeeEEccccCeEEeccccceEEEEE
Confidence            9999999999999999999999996

>KOG0292|consensus

Probab=99.71  E-value=5.6e-17  Score=106.51  Aligned_cols=95  Identities=19%  Similarity=0.263  Sum_probs=86.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|-+|++|+.++.+++.++..  |-+.+.++.|++.-+.   ++++|.|.+|+||++.+++++..+.+|.    ..|.
T Consensus        69 GGDDykIkVWnYk~rrclftL~G--HlDYVRt~~FHheyPW---IlSASDDQTIrIWNwqsr~~iavltGHn----HYVM  139 (1202)
T KOG0292|consen   69 GGDDYKIKVWNYKTRRCLFTLLG--HLDYVRTVFFHHEYPW---ILSASDDQTIRIWNWQSRKCIAVLTGHN----HYVM  139 (1202)
T ss_pred             cCCccEEEEEecccceehhhhcc--ccceeEEeeccCCCce---EEEccCCCeEEEEeccCCceEEEEecCc----eEEE
Confidence            46788999999999999555444  6777888999998888   8999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |..|+|....++|+|-|.+||+||
T Consensus       140 cAqFhptEDlIVSaSLDQTVRVWD  163 (1202)
T KOG0292|consen  140 CAQFHPTEDLIVSASLDQTVRVWD  163 (1202)
T ss_pred             eeccCCccceEEEecccceEEEEe
Confidence            999999999999999999999998

>PTZ00420 coronin; Provisional

Probab=99.69  E-value=3e-16  Score=101.11  Aligned_cols=98  Identities=8%  Similarity=0.156  Sum_probs=76.3

Q ss_pred             CcCCCceEEEEeCccCce-ee-----ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135          2 QKVPSSVIYIWTLLELQT-YA-----RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      +...|++|++||+.++.. ..     ......|...+..+.|+|.+...  +++++.|+.|++||+++++....+. +. 
T Consensus        92 SgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~i--LaSgS~DgtIrIWDl~tg~~~~~i~-~~-  167 (568)
T PTZ00420         92 SGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYI--MCSSGFDSFVNIWDIENEKRAFQIN-MP-  167 (568)
T ss_pred             EEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeE--EEEEeCCCeEEEEECCCCcEEEEEe-cC-
Confidence            346799999999986432 11     11122345567779999987653  5799999999999999988766664 44 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..+.+++|+|++..+++++.|+.+++||
T Consensus       168 ---~~V~SlswspdG~lLat~s~D~~IrIwD  195 (568)
T PTZ00420        168 ---KKLSSLKWNIKGNLLSGTCVGKHMHIID  195 (568)
T ss_pred             ---CcEEEEEECCCCCEEEEEecCCEEEEEE
Confidence               6899999999999999999999999997

>KOG0282|consensus

Probab=99.69  E-value=1.5e-16  Score=98.33  Aligned_cols=96  Identities=21%  Similarity=0.295  Sum_probs=85.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +..-|..|++||+.+|+++.++..   .....++.+.|.+...  +++|+.|+.|+.||+++++.++.+..|.    ..|
T Consensus       275 S~sfD~~lKlwDtETG~~~~~f~~---~~~~~cvkf~pd~~n~--fl~G~sd~ki~~wDiRs~kvvqeYd~hL----g~i  345 (503)
T KOG0282|consen  275 SASFDRFLKLWDTETGQVLSRFHL---DKVPTCVKFHPDNQNI--FLVGGSDKKIRQWDIRSGKVVQEYDRHL----GAI  345 (503)
T ss_pred             eeecceeeeeeccccceEEEEEec---CCCceeeecCCCCCcE--EEEecCCCcEEEEeccchHHHHHHHhhh----hhe
Confidence            346689999999999999888877   4456778999998444  7899999999999999999999999888    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.|-++++.+++++.|+.+++|+
T Consensus       346 ~~i~F~~~g~rFissSDdks~riWe  370 (503)
T KOG0282|consen  346 LDITFVDEGRRFISSSDDKSVRIWE  370 (503)
T ss_pred             eeeEEccCCceEeeeccCccEEEEE
Confidence            9999999999999999999999996

>KOG0645|consensus

Probab=99.68  E-value=7.2e-16  Score=89.87  Aligned_cols=97  Identities=14%  Similarity=0.258  Sum_probs=80.3

Q ss_pred             CcCCCceEEEEeCccCc---eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheecccccc
Q psy17135          2 QKVPSSVIYIWTLLELQ---TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHRKK   76 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~   76 (106)
                      ++..|..|++|++..+.   +...+.- .|...+..++|.|.+++   |++++.|.++.||.-..+  +++..+.+|+  
T Consensus        32 scg~Dk~vriw~~~~~~s~~ck~vld~-~hkrsVRsvAwsp~g~~---La~aSFD~t~~Iw~k~~~efecv~~lEGHE--  105 (312)
T KOG0645|consen   32 SCGTDKAVRIWSTSSGDSWTCKTVLDD-GHKRSVRSVAWSPHGRY---LASASFDATVVIWKKEDGEFECVATLEGHE--  105 (312)
T ss_pred             eecCCceEEEEecCCCCcEEEEEeccc-cchheeeeeeecCCCcE---EEEeeccceEEEeecCCCceeEEeeeeccc--
Confidence            46789999999998533   3112222 34556788999999998   999999999999976654  5788999999  


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        ..|-+++|+++|.+||+|++|..|-+|.
T Consensus       106 --nEVK~Vaws~sG~~LATCSRDKSVWiWe  133 (312)
T KOG0645|consen  106 --NEVKCVAWSASGNYLATCSRDKSVWIWE  133 (312)
T ss_pred             --cceeEEEEcCCCCEEEEeeCCCeEEEEE
Confidence              8999999999999999999999999984

>KOG0278|consensus

Probab=99.68  E-value=4.2e-16  Score=90.35  Aligned_cols=97  Identities=12%  Similarity=0.201  Sum_probs=74.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCC-------------------------------------CCCCCeeEeeeCCCCce
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPEL-------------------------------------NSEPPACQTIPSSNISL   45 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~   45 (106)
                      +..|++||+||.+++..+..+....+                                     ...+.+.+..|....  
T Consensus       161 Sadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~--  238 (334)
T KOG0278|consen  161 SADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEF--  238 (334)
T ss_pred             eccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCce--
Confidence            46788899999888877776654330                                     011222333444433  


Q ss_pred             EEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         46 FDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        46 ~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       +++|++|..++.||..++..+..+ .+|.    +.|.|+.|+|+|...++|+.||+|++|.
T Consensus       239 -fVaGged~~~~kfDy~TgeEi~~~nkgh~----gpVhcVrFSPdGE~yAsGSEDGTirlWQ  295 (334)
T KOG0278|consen  239 -FVAGGEDFKVYKFDYNTGEEIGSYNKGHF----GPVHCVRFSPDGELYASGSEDGTIRLWQ  295 (334)
T ss_pred             -EEecCcceEEEEEeccCCceeeecccCCC----CceEEEEECCCCceeeccCCCceEEEEE
Confidence             699999999999999999877775 7777    8999999999999999999999999993

>KOG0315|consensus

Probab=99.68  E-value=4.6e-16  Score=89.97  Aligned_cols=94  Identities=14%  Similarity=0.247  Sum_probs=77.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ....||+||++++.+......+.|+..+..+.|...+..   ++||++||+++|||++...+-+.+. +.    ..|+++
T Consensus        59 ~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrW---MyTgseDgt~kIWdlR~~~~qR~~~-~~----spVn~v  130 (311)
T KOG0315|consen   59 GNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRW---MYTGSEDGTVKIWDLRSLSCQRNYQ-HN----SPVNTV  130 (311)
T ss_pred             cCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeE---EEecCCCceEEEEeccCcccchhcc-CC----CCcceE
Confidence            346799999998877555555556666777888888877   8999999999999999866555554 55    799999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+|+...|++|..+|.|++||
T Consensus       131 vlhpnQteLis~dqsg~irvWD  152 (311)
T KOG0315|consen  131 VLHPNQTELISGDQSGNIRVWD  152 (311)
T ss_pred             EecCCcceEEeecCCCcEEEEE
Confidence            9999999999999999999997

>KOG0315|consensus

Probab=99.68  E-value=3.3e-16  Score=90.57  Aligned_cols=94  Identities=17%  Similarity=0.288  Sum_probs=80.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~   80 (106)
                      -..|.+||+|.+.+|.+  ....++..+.+..+...|....   |++++. ..||+||+++++  ++.++.+|.    ..
T Consensus        16 A~YDhTIRfWqa~tG~C--~rTiqh~dsqVNrLeiTpdk~~---LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~----kN   85 (311)
T KOG0315|consen   16 AGYDHTIRFWQALTGIC--SRTIQHPDSQVNRLEITPDKKD---LAAAGN-QHVRLYDLNSNNPNPVATFEGHT----KN   85 (311)
T ss_pred             ccCcceeeeeehhcCeE--EEEEecCccceeeEEEcCCcch---hhhccC-CeeEEEEccCCCCCceeEEeccC----Cc
Confidence            46789999999999999  5555555667888888888887   666664 679999999865  588899998    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.++.|..+|+++.+|++||+++|||
T Consensus        86 VtaVgF~~dgrWMyTgseDgt~kIWd  111 (311)
T KOG0315|consen   86 VTAVGFQCDGRWMYTGSEDGTVKIWD  111 (311)
T ss_pred             eEEEEEeecCeEEEecCCCceEEEEe
Confidence            99999999999999999999999997

>KOG0292|consensus

Probab=99.68  E-value=1.2e-16  Score=105.05  Aligned_cols=96  Identities=23%  Similarity=0.400  Sum_probs=87.7

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ++.-+|.|++||.+-+.++.++.-  |.+.+..+.|+|..+.   +++|+.|..|++|+.++.+|+.++.+|-    +.|
T Consensus        26 tslHsG~IQlWDYRM~tli~rFde--HdGpVRgv~FH~~qpl---FVSGGDDykIkVWnYk~rrclftL~GHl----DYV   96 (1202)
T KOG0292|consen   26 TSLHSGVIQLWDYRMGTLIDRFDE--HDGPVRGVDFHPTQPL---FVSGGDDYKIKVWNYKTRRCLFTLLGHL----DYV   96 (1202)
T ss_pred             EeecCceeeeehhhhhhHHhhhhc--cCCccceeeecCCCCe---EEecCCccEEEEEecccceehhhhcccc----cee
Confidence            345689999999999999777776  4666778999999988   8999999999999999999999999999    999


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.|++..++++|+|.|.+|+||.
T Consensus        97 Rt~~FHheyPWIlSASDDQTIrIWN  121 (1202)
T KOG0292|consen   97 RTVFFHHEYPWILSASDDQTIRIWN  121 (1202)
T ss_pred             EEeeccCCCceEEEccCCCeEEEEe
Confidence            9999999999999999999999995

>KOG0285|consensus

Probab=99.67  E-value=2.1e-16  Score=95.28  Aligned_cols=95  Identities=16%  Similarity=0.318  Sum_probs=83.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|+.||+...+.+..+..  |-+.+.++..+|.-..   +++|+.|.++++||+++...+..+.+|.    ..|.
T Consensus       211 ~gedk~VKCwDLe~nkvIR~YhG--HlS~V~~L~lhPTldv---l~t~grDst~RvWDiRtr~~V~~l~GH~----~~V~  281 (460)
T KOG0285|consen  211 AGEDKQVKCWDLEYNKVIRHYHG--HLSGVYCLDLHPTLDV---LVTGGRDSTIRVWDIRTRASVHVLSGHT----NPVA  281 (460)
T ss_pred             ecCCCeeEEEechhhhhHHHhcc--ccceeEEEecccccee---EEecCCcceEEEeeecccceEEEecCCC----Ccce
Confidence            46799999999998887666655  3456777888887766   8999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+.|-...+++|+-|++|++||
T Consensus       282 ~V~~~~~dpqvit~S~D~tvrlWD  305 (460)
T KOG0285|consen  282 SVMCQPTDPQVITGSHDSTVRLWD  305 (460)
T ss_pred             eEEeecCCCceEEecCCceEEEee
Confidence            999999888999999999999998

>KOG0647|consensus

Probab=99.67  E-value=7.4e-16  Score=90.96  Aligned_cols=96  Identities=14%  Similarity=0.184  Sum_probs=77.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .+=|++||+|+++............+...+.++.|+.++..   +++|+.|+.+++||+.+++ ..++..|.    ..|.
T Consensus        46 ~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddgsk---Vf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd----~pvk  117 (347)
T KOG0647|consen   46 GSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSK---VFSGGCDKQAKLWDLASGQ-VSQVAAHD----APVK  117 (347)
T ss_pred             cccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCce---EEeeccCCceEEEEccCCC-eeeeeecc----ccee
Confidence            34589999999987433333444445666777999999987   8999999999999999985 66777888    8999


Q ss_pred             EEEEcCCCC--EEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKP--FIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~--~~~s~~~d~~i~iwd  106 (106)
                      .+.|-+...  .|++||.|.+++.||
T Consensus       118 t~~wv~~~~~~cl~TGSWDKTlKfWD  143 (347)
T KOG0647|consen  118 TCHWVPGMNYQCLVTGSWDKTLKFWD  143 (347)
T ss_pred             EEEEecCCCcceeEecccccceeecc
Confidence            999876444  699999999999998

>KOG0772|consensus

Probab=99.67  E-value=2.7e-16  Score=98.33  Aligned_cols=101  Identities=18%  Similarity=0.252  Sum_probs=75.3

Q ss_pred             CCcCCCceEEEEeCccCce-eeeccc---CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--ch-heeccc
Q psy17135          1 MQKVPSSVIYIWTLLELQT-YARNDC---PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CV-QEITAH   73 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~-~~~~~~   73 (106)
                      |++..||+++|||+...+. +..+..   ......+.+|.|++.+..   +++|+.||.|++|+.....  +. ..-.+|
T Consensus       285 lT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~---iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH  361 (641)
T KOG0772|consen  285 LTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKL---IAAGCLDGSIQIWDKGSRTVRPVMKVKDAH  361 (641)
T ss_pred             EEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcch---hhhcccCCceeeeecCCcccccceEeeecc
Confidence            6789999999999976332 122221   112234566999999999   8999999999999975432  22 222455


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...  ..|+++.||++|++|+|-+.|.++++||
T Consensus       362 ~~g--~~Itsi~FS~dg~~LlSRg~D~tLKvWD  392 (641)
T KOG0772|consen  362 LPG--QDITSISFSYDGNYLLSRGFDDTLKVWD  392 (641)
T ss_pred             CCC--CceeEEEeccccchhhhccCCCceeeee
Confidence            521  4899999999999999999999999997

>KOG0319|consensus

Probab=99.67  E-value=6.3e-16  Score=99.55  Aligned_cols=96  Identities=19%  Similarity=0.337  Sum_probs=86.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      |.+-|.+.+||++..++.+..+..  |..++-++.|.|.++.   ++|+|.|++|+||.+.+..|++++.+|.    ..|
T Consensus       480 T~SqDktaKiW~le~~~l~~vLsG--H~RGvw~V~Fs~~dq~---laT~SgD~TvKIW~is~fSClkT~eGH~----~aV  550 (775)
T KOG0319|consen  480 TGSQDKTAKIWDLEQLRLLGVLSG--HTRGVWCVSFSKNDQL---LATCSGDKTVKIWSISTFSCLKTFEGHT----SAV  550 (775)
T ss_pred             ecccccceeeecccCceEEEEeeC--CccceEEEEeccccce---eEeccCCceEEEEEeccceeeeeecCcc----cee
Confidence            457799999999997777666655  5667788999999998   8999999999999999999999999999    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.|--++..++||+.||.+++|+
T Consensus       551 lra~F~~~~~qliS~~adGliKlWn  575 (775)
T KOG0319|consen  551 LRASFIRNGKQLISAGADGLIKLWN  575 (775)
T ss_pred             EeeeeeeCCcEEEeccCCCcEEEEe
Confidence            9999999999999999999999995

>KOG4283|consensus

Probab=99.66  E-value=1.2e-15  Score=90.21  Aligned_cols=98  Identities=17%  Similarity=0.316  Sum_probs=83.2

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +++=|.++++||..+.+....+..+   ..+..-.++|......++++|..+-.|++.|+..|.+...+.+|.    +.|
T Consensus       119 ssSFDhtlKVWDtnTlQ~a~~F~me---~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr----~~v  191 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTNTLQEAVDFKME---GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHR----DGV  191 (397)
T ss_pred             cccccceEEEeecccceeeEEeecC---ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeecccc----Cce
Confidence            3556899999999999987777774   335555677776655557999999999999999999999999999    899


Q ss_pred             EEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      .++.|+|...+ |++|+.||.+++||
T Consensus       192 laV~Wsp~~e~vLatgsaDg~irlWD  217 (397)
T KOG4283|consen  192 LAVEWSPSSEWVLATGSADGAIRLWD  217 (397)
T ss_pred             EEEEeccCceeEEEecCCCceEEEEE
Confidence            99999996665 89999999999997

>KOG0318|consensus

Probab=99.66  E-value=1.5e-15  Score=95.10  Aligned_cols=97  Identities=15%  Similarity=0.217  Sum_probs=85.0

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec---cccccC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---AHRKKF   77 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~   77 (106)
                      |+...|++|.+|+=-..+-  .....+|..-+.++.|+|++..   +++++.|+++.+||-.+|..+..+.   +|.   
T Consensus       164 ~T~sdDn~v~ffeGPPFKF--k~s~r~HskFV~~VRysPDG~~---Fat~gsDgki~iyDGktge~vg~l~~~~aHk---  235 (603)
T KOG0318|consen  164 ATGSDDNTVAFFEGPPFKF--KSSFREHSKFVNCVRYSPDGSR---FATAGSDGKIYIYDGKTGEKVGELEDSDAHK---  235 (603)
T ss_pred             EeccCCCeEEEeeCCCeee--eecccccccceeeEEECCCCCe---EEEecCCccEEEEcCCCccEEEEecCCCCcc---
Confidence            5778999999999777665  5555556666788999999888   8999999999999999999888887   566   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       +.|++++|+||+..+++++.|.++++||
T Consensus       236 -GsIfalsWsPDs~~~~T~SaDkt~KIWd  263 (603)
T KOG0318|consen  236 -GSIFALSWSPDSTQFLTVSADKTIKIWD  263 (603)
T ss_pred             -ccEEEEEECCCCceEEEecCCceEEEEE
Confidence             8999999999999999999999999997

>KOG0281|consensus

Probab=99.65  E-value=3.5e-16  Score=94.26  Aligned_cols=91  Identities=20%  Similarity=0.301  Sum_probs=75.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      -+.|.+|++|++.+++.+..+..  |..++.++.+     .+.++++|+.|.+|++||+..|.+++.+++|+    .-|.
T Consensus       336 ASgDRTikvW~~st~efvRtl~g--HkRGIAClQY-----r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHE----eLvR  404 (499)
T KOG0281|consen  336 ASGDRTIKVWSTSTCEFVRTLNG--HKRGIACLQY-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE----ELVR  404 (499)
T ss_pred             ecCCceEEEEeccceeeehhhhc--ccccceehhc-----cCeEEEecCCCceEEEEeccccHHHHHHhchH----Hhhh
Confidence            46899999999999999655554  4444444432     23338999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.|.  ...++||+.||+|++||
T Consensus       405 ciRFd--~krIVSGaYDGkikvWd  426 (499)
T KOG0281|consen  405 CIRFD--NKRIVSGAYDGKIKVWD  426 (499)
T ss_pred             heeec--CceeeeccccceEEEEe
Confidence            99995  66799999999999997

>KOG0281|consensus

Probab=99.64  E-value=1e-15  Score=92.25  Aligned_cols=92  Identities=15%  Similarity=0.262  Sum_probs=76.3

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ....|++|+|||.++..++..+..  |.+.+.++.|...     ++++|+.|.+|++||++++.+++++..|.    ..|
T Consensus       212 SGlrDnTikiWD~n~~~c~~~L~G--HtGSVLCLqyd~r-----viisGSSDsTvrvWDv~tge~l~tlihHc----eaV  280 (499)
T KOG0281|consen  212 SGLRDNTIKIWDKNSLECLKILTG--HTGSVLCLQYDER-----VIVSGSSDSTVRVWDVNTGEPLNTLIHHC----EAV  280 (499)
T ss_pred             cccccCceEEeccccHHHHHhhhc--CCCcEEeeeccce-----EEEecCCCceEEEEeccCCchhhHHhhhc----cee
Confidence            456899999999999998655555  4444444544332     37999999999999999999999999898    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.|+  ..++++|+.|+++.+||
T Consensus       281 Lhlrf~--ng~mvtcSkDrsiaVWd  303 (499)
T KOG0281|consen  281 LHLRFS--NGYMVTCSKDRSIAVWD  303 (499)
T ss_pred             EEEEEe--CCEEEEecCCceeEEEe
Confidence            999997  56899999999999997

>KOG0276|consensus

Probab=99.64  E-value=1.7e-15  Score=96.66  Aligned_cols=96  Identities=21%  Similarity=0.307  Sum_probs=84.6

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~   80 (106)
                      +...|..|++|+..+++.+..+  +.|.+.+.++..+|..+.   ++|+|.|.+|++||.+++ .+.+++.+|.    ..
T Consensus        72 ~GsDD~~IrVfnynt~ekV~~F--eAH~DyIR~iavHPt~P~---vLtsSDDm~iKlW~we~~wa~~qtfeGH~----Hy  142 (794)
T KOG0276|consen   72 TGSDDMQIRVFNYNTGEKVKTF--EAHSDYIRSIAVHPTLPY---VLTSSDDMTIKLWDWENEWACEQTFEGHE----HY  142 (794)
T ss_pred             EecCCceEEEEecccceeeEEe--eccccceeeeeecCCCCe---EEecCCccEEEEeeccCceeeeeEEcCcc----eE
Confidence            3568999999999999985554  446778888999999988   899999999999999975 6788899999    89


Q ss_pred             eEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      |..++|+| |...++|+|-|++|++|.
T Consensus       143 VMqv~fnPkD~ntFaS~sLDrTVKVWs  169 (794)
T KOG0276|consen  143 VMQVAFNPKDPNTFASASLDRTVKVWS  169 (794)
T ss_pred             EEEEEecCCCccceeeeeccccEEEEE
Confidence            99999999 677899999999999994

>KOG0289|consensus

Probab=99.63  E-value=4.3e-15  Score=91.32  Aligned_cols=97  Identities=15%  Similarity=0.214  Sum_probs=84.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      -.+|++.-..|+.++..+-...-........+..|+|++-.   |++|..|+.+++||+.....+..+.+|.    +.|.
T Consensus       321 As~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLi---fgtgt~d~~vkiwdlks~~~~a~Fpght----~~vk  393 (506)
T KOG0289|consen  321 ASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLI---FGTGTPDGVVKIWDLKSQTNVAKFPGHT----GPVK  393 (506)
T ss_pred             ecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceE---EeccCCCceEEEEEcCCccccccCCCCC----Ccee
Confidence            36899999999999998655544323344667889998877   8999999999999999999999999998    9999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++|+.+|.++++++.|+.|++||
T Consensus       394 ~i~FsENGY~Lat~add~~V~lwD  417 (506)
T KOG0289|consen  394 AISFSENGYWLATAADDGSVKLWD  417 (506)
T ss_pred             EEEeccCceEEEEEecCCeEEEEE
Confidence            999999999999999999999998

>KOG0264|consensus

Probab=99.63  E-value=2.3e-15  Score=92.26  Aligned_cols=99  Identities=15%  Similarity=0.219  Sum_probs=78.8

Q ss_pred             CcCCCceEEEEeCccCcee----e-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cccchheecccc
Q psy17135          2 QKVPSSVIYIWTLLELQTY----A-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCVQEITAHR   74 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~~~~~~~~   74 (106)
                      +...|++|.+||+......    . +.....|.+.+..+.|++.....  |++++.|+.+.|||.+  +.++.....+|.
T Consensus       195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~l--F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~  272 (422)
T KOG0264|consen  195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDL--FGSVGDDGKLMIWDTRSNTSKPSHSVKAHS  272 (422)
T ss_pred             eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhh--heeecCCCeEEEEEcCCCCCCCcccccccC
Confidence            4567999999999864431    1 12222355566679999988876  8999999999999999  455666777887


Q ss_pred             ccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                          ..++|++|+| ++..||+||.|++|.+||
T Consensus       273 ----~~vn~~~fnp~~~~ilAT~S~D~tV~LwD  301 (422)
T KOG0264|consen  273 ----AEVNCVAFNPFNEFILATGSADKTVALWD  301 (422)
T ss_pred             ----CceeEEEeCCCCCceEEeccCCCcEEEee
Confidence                8999999999 777899999999999998

>KOG0313|consensus

Probab=99.63  E-value=1.1e-15  Score=92.35  Aligned_cols=94  Identities=19%  Similarity=0.248  Sum_probs=79.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~   79 (106)
                      ..=|.+|+.||+.+++.......   +....++.++|....   +++|+.|..+++||.+++.   ...++.+|.    .
T Consensus       277 ~SwDHTIk~WDletg~~~~~~~~---~ksl~~i~~~~~~~L---l~~gssdr~irl~DPR~~~gs~v~~s~~gH~----n  346 (423)
T KOG0313|consen  277 VSWDHTIKVWDLETGGLKSTLTT---NKSLNCISYSPLSKL---LASGSSDRHIRLWDPRTGDGSVVSQSLIGHK----N  346 (423)
T ss_pred             ecccceEEEEEeecccceeeeec---CcceeEeecccccce---eeecCCCCceeecCCCCCCCceeEEeeecch----h
Confidence            34589999999999998777666   445778888887777   8999999999999999863   356778888    8


Q ss_pred             CeEEEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPS-KPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~-~~~~~s~~~d~~i~iwd  106 (106)
                      -|..+.|+|. ...|+|++.|+++++||
T Consensus       347 wVssvkwsp~~~~~~~S~S~D~t~klWD  374 (423)
T KOG0313|consen  347 WVSSVKWSPTNEFQLVSGSYDNTVKLWD  374 (423)
T ss_pred             hhhheecCCCCceEEEEEecCCeEEEEE
Confidence            9999999994 45699999999999997

>PTZ00421 coronin; Provisional

Probab=99.63  E-value=6e-15  Score=94.24  Aligned_cols=96  Identities=11%  Similarity=0.167  Sum_probs=76.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|+|||+.+++.+..+..  |...+..+.|+|.+..   +++++.|+.|++||+++++.+..+..|..   ....
T Consensus       144 gs~DgtVrIWDl~tg~~~~~l~~--h~~~V~sla~spdG~l---Latgs~Dg~IrIwD~rsg~~v~tl~~H~~---~~~~  215 (493)
T PTZ00421        144 AGADMVVNVWDVERGKAVEVIKC--HSDQITSLEWNLDGSL---LCTTSKDKKLNIIDPRDGTIVSSVEAHAS---AKSQ  215 (493)
T ss_pred             EeCCCEEEEEECCCCeEEEEEcC--CCCceEEEEEECCCCE---EEEecCCCEEEEEECCCCcEEEEEecCCC---Ccce
Confidence            35699999999999887555443  4556778999998877   89999999999999999998888888862   3345


Q ss_pred             EEEEcCCCCEEEEec----CCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAG----ADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~----~d~~i~iwd  106 (106)
                      .+.|.+++..+++++    .|+.|++||
T Consensus       216 ~~~w~~~~~~ivt~G~s~s~Dr~VklWD  243 (493)
T PTZ00421        216 RCLWAKRKDLIITLGCSKSQQRQIMLWD  243 (493)
T ss_pred             EEEEcCCCCeEEEEecCCCCCCeEEEEe
Confidence            677888877776654    478999997

>KOG0284|consensus

Probab=99.63  E-value=7.4e-16  Score=93.91  Aligned_cols=95  Identities=18%  Similarity=0.227  Sum_probs=80.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .-.+|.|++|+..-...  .....+|...+..++|+|....   +++++.|++++|||....+..+.+.+|.    -.|.
T Consensus       156 gD~gG~iKyWqpnmnnV--k~~~ahh~eaIRdlafSpnDsk---F~t~SdDg~ikiWdf~~~kee~vL~GHg----wdVk  226 (464)
T KOG0284|consen  156 GDKGGMIKYWQPNMNNV--KIIQAHHAEAIRDLAFSPNDSK---FLTCSDDGTIKIWDFRMPKEERVLRGHG----WDVK  226 (464)
T ss_pred             cCCCceEEecccchhhh--HHhhHhhhhhhheeccCCCCce---eEEecCCCeEEEEeccCCchhheeccCC----CCcc
Confidence            45789999999864432  2222233356788999998887   8999999999999999999999999998    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|....++++|.|..|++||
T Consensus       227 svdWHP~kgLiasgskDnlVKlWD  250 (464)
T KOG0284|consen  227 SVDWHPTKGLIASGSKDNLVKLWD  250 (464)
T ss_pred             eeccCCccceeEEccCCceeEeec
Confidence            999999999999999999999998

>KOG0282|consensus

Probab=99.63  E-value=8.6e-16  Score=95.05  Aligned_cols=95  Identities=11%  Similarity=0.183  Sum_probs=81.2

Q ss_pred             CcCCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      .+.-|+.|+|||+.. ++++..+..  |...+..+.|+..+..   +++++.|+.+++||.++|+++..+...     ..
T Consensus       232 S~gmD~~vklW~vy~~~~~lrtf~g--H~k~Vrd~~~s~~g~~---fLS~sfD~~lKlwDtETG~~~~~f~~~-----~~  301 (503)
T KOG0282|consen  232 SGGMDGLVKLWNVYDDRRCLRTFKG--HRKPVRDASFNNCGTS---FLSASFDRFLKLWDTETGQVLSRFHLD-----KV  301 (503)
T ss_pred             ecCCCceEEEEEEecCcceehhhhc--chhhhhhhhccccCCe---eeeeecceeeeeeccccceEEEEEecC-----CC
Confidence            356799999999987 777666665  4666777999998888   899999999999999999999888644     47


Q ss_pred             eEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      +.|+.|+|++ ..+++|+.|+.|+.||
T Consensus       302 ~~cvkf~pd~~n~fl~G~sd~ki~~wD  328 (503)
T KOG0282|consen  302 PTCVKFHPDNQNIFLVGGSDKKIRQWD  328 (503)
T ss_pred             ceeeecCCCCCcEEEEecCCCcEEEEe
Confidence            8999999987 6799999999999997

>KOG0267|consensus

Probab=99.62  E-value=1.1e-15  Score=98.56  Aligned_cols=95  Identities=18%  Similarity=0.342  Sum_probs=84.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..++|+|++||+.+.+.++.+.++  ......+.|+|.+.+   +++|+.|...++||.+...|...+.+|.    ..+.
T Consensus        88 gsasgtiK~wDleeAk~vrtLtgh--~~~~~sv~f~P~~~~---~a~gStdtd~~iwD~Rk~Gc~~~~~s~~----~vv~  158 (825)
T KOG0267|consen   88 GSASGTIKVWDLEEAKIVRTLTGH--LLNITSVDFHPYGEF---FASGSTDTDLKIWDIRKKGCSHTYKSHT----RVVD  158 (825)
T ss_pred             cccCCceeeeehhhhhhhhhhhcc--ccCcceeeeccceEE---eccccccccceehhhhccCceeeecCCc----ceeE
Confidence            467999999999998887766663  455777889998888   7999999999999999888898998887    7899


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.|+|+|+++++++.|.++++||
T Consensus       159 ~l~lsP~Gr~v~~g~ed~tvki~d  182 (825)
T KOG0267|consen  159 VLRLSPDGRWVASGGEDNTVKIWD  182 (825)
T ss_pred             EEeecCCCceeeccCCcceeeeec
Confidence            999999999999999999999997

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.61  E-value=1.3e-14  Score=97.30  Aligned_cols=94  Identities=16%  Similarity=0.181  Sum_probs=76.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|++|++||+.+++.+..+..  |...+..+.|+|.....  |++|+.|+.|++||++++.++..+..+     ..+.+
T Consensus       552 ~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~--L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-----~~v~~  622 (793)
T PLN00181        552 NFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTL--LASGSDDGSVKLWSINQGVSIGTIKTK-----ANICC  622 (793)
T ss_pred             eCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCE--EEEEcCCCEEEEEECCCCcEEEEEecC-----CCeEE
Confidence            4699999999999887555543  45667789998754332  899999999999999998888777643     57889


Q ss_pred             EEEc-CCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFH-PSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~-~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|+ +++..+++|+.|+.|++||
T Consensus       623 v~~~~~~g~~latgs~dg~I~iwD  646 (793)
T PLN00181        623 VQFPSESGRSLAFGSADHKVYYYD  646 (793)
T ss_pred             EEEeCCCCCEEEEEeCCCeEEEEE
Confidence            9995 5789999999999999997

>KOG0294|consensus

Probab=99.61  E-value=8.9e-15  Score=86.92  Aligned_cols=98  Identities=17%  Similarity=0.256  Sum_probs=82.5

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|.+|+|||+++...+..+..  |.+.+.++.|.+..... .|++|+.||.|.+|+...-.++..+.+|.    ..|
T Consensus        58 SGssDetI~IYDm~k~~qlg~ll~--HagsitaL~F~~~~S~s-hLlS~sdDG~i~iw~~~~W~~~~slK~H~----~~V  130 (362)
T KOG0294|consen   58 SGSSDETIHIYDMRKRKQLGILLS--HAGSITALKFYPPLSKS-HLLSGSDDGHIIIWRVGSWELLKSLKAHK----GQV  130 (362)
T ss_pred             ccCCCCcEEEEeccchhhhcceec--cccceEEEEecCCcchh-heeeecCCCcEEEEEcCCeEEeeeecccc----ccc
Confidence            346899999999998776444433  46667788887776521 17999999999999999999999999999    789


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.++++|.+++..+.+.|+.+++|+
T Consensus       131 t~lsiHPS~KLALsVg~D~~lr~WN  155 (362)
T KOG0294|consen  131 TDLSIHPSGKLALSVGGDQVLRTWN  155 (362)
T ss_pred             ceeEecCCCceEEEEcCCceeeeeh
Confidence            9999999999999999999999996

>KOG0273|consensus

Probab=99.60  E-value=1.2e-14  Score=90.06  Aligned_cols=96  Identities=19%  Similarity=0.324  Sum_probs=85.4

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ++..|+.|+++-+...++...+..  |+..+..+.|.|.+..   |++++.|++++||+...+.+...+.+|.    ..|
T Consensus       334 ts~td~~i~V~kv~~~~P~~t~~G--H~g~V~alk~n~tg~L---LaS~SdD~TlkiWs~~~~~~~~~l~~Hs----kei  404 (524)
T KOG0273|consen  334 TSSTDGCIHVCKVGEDRPVKTFIG--HHGEVNALKWNPTGSL---LASCSDDGTLKIWSMGQSNSVHDLQAHS----KEI  404 (524)
T ss_pred             ecCCCceEEEEEecCCCcceeeec--ccCceEEEEECCCCce---EEEecCCCeeEeeecCCCcchhhhhhhc----cce
Confidence            467899999999998888666666  5667889999999988   9999999999999999999999999999    899


Q ss_pred             EEEEEcCCCC---------EEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKP---------FIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~---------~~~s~~~d~~i~iwd  106 (106)
                      ..+.|+|.+.         .+++++.|++|++||
T Consensus       405 ~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd  438 (524)
T KOG0273|consen  405 YTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD  438 (524)
T ss_pred             eeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence            9999998653         689999999999997

>KOG0265|consensus

Probab=99.59  E-value=1.3e-14  Score=85.69  Aligned_cols=96  Identities=16%  Similarity=0.230  Sum_probs=78.2

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      .+..|.+++.||+++|++..++..  |..-+..+.  |......++.+++.|+++++||+++..+++++...     -++
T Consensus       107 S~gtDk~v~~wD~~tG~~~rk~k~--h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k-----yql  177 (338)
T KOG0265|consen  107 SCGTDKTVRGWDAETGKRIRKHKG--HTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK-----YQL  177 (338)
T ss_pred             EecCCceEEEEecccceeeehhcc--ccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhccccc-----eeE
Confidence            467899999999999999777766  343333343  54444455789999999999999999888888644     488


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++.|...+..+++|+=|+.|++||
T Consensus       178 tAv~f~d~s~qv~sggIdn~ikvWd  202 (338)
T KOG0265|consen  178 TAVGFKDTSDQVISGGIDNDIKVWD  202 (338)
T ss_pred             EEEEecccccceeeccccCceeeec
Confidence            9999999999999999999999997

>PTZ00420 coronin; Provisional

Probab=99.59  E-value=2.4e-14  Score=92.53  Aligned_cols=93  Identities=16%  Similarity=0.244  Sum_probs=71.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC-CCceEEEeeCCCCcEEEeeCCCcc--------chheeccccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS-NISLFDSRPGHDCSIRLWNLDNKT--------CVQEITAHRK   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~v~iwd~~~~~--------~~~~~~~~~~   75 (106)
                      .++.|++|+......+..+.  .|...+..+.|+|.. ..   +++|+.|+.|++||+.++.        ++..+.+|. 
T Consensus        52 ~~gvI~L~~~~r~~~v~~L~--gH~~~V~~lafsP~~~~l---LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~-  125 (568)
T PTZ00420         52 LIGAIRLENQMRKPPVIKLK--GHTSSILDLQFNPCFSEI---LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK-  125 (568)
T ss_pred             ceeEEEeeecCCCceEEEEc--CCCCCEEEEEEcCCCCCE---EEEEeCCCeEEEEECCCCCccccccccceEEeecCC-
Confidence            46778888877665533333  355667789999974 44   8999999999999998642        233456676 


Q ss_pred             cCCCCeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                         ..|.+++|+|++.. +++++.|++|++||
T Consensus       126 ---~~V~sVaf~P~g~~iLaSgS~DgtIrIWD  154 (568)
T PTZ00420        126 ---KKISIIDWNPMNYYIMCSSGFDSFVNIWD  154 (568)
T ss_pred             ---CcEEEEEECCCCCeEEEEEeCCCeEEEEE
Confidence               89999999998875 57999999999997

>KOG1445|consensus

Probab=99.59  E-value=3.6e-15  Score=95.72  Aligned_cols=97  Identities=20%  Similarity=0.299  Sum_probs=80.5

Q ss_pred             CCCceEEEEeCccCceeeeccc-----CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDC-----PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      ..||.|++|-+..+..-.....     ..|...+..+.|+|.....  |++++.|.+|++||+.+++....+.+|.    
T Consensus       647 ~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadv--La~asyd~Ti~lWDl~~~~~~~~l~gHt----  720 (1012)
T KOG1445|consen  647 TDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADV--LAVASYDSTIELWDLANAKLYSRLVGHT----  720 (1012)
T ss_pred             ccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhH--hhhhhccceeeeeehhhhhhhheeccCc----
Confidence            3689999999976544222211     1245567779999987775  7899999999999999999988999999    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|+.++|||+|+.+++.|.||++++|.
T Consensus       721 dqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  721 DQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             CceeEEEECCCCcceeeeecCceEEEeC
Confidence            9999999999999999999999999974

>KOG0313|consensus

Probab=99.58  E-value=1.8e-14  Score=87.28  Aligned_cols=97  Identities=16%  Similarity=0.300  Sum_probs=81.4

Q ss_pred             cCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~   80 (106)
                      ...|..|++||-+++.- +.......|..-+..+.|+|...+.  |++++.|+++++||+++.+ ++..+.+|.    +.
T Consensus       318 gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~--~~S~S~D~t~klWDvRS~k~plydI~~h~----DK  391 (423)
T KOG0313|consen  318 GSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQ--LVSGSYDNTVKLWDVRSTKAPLYDIAGHN----DK  391 (423)
T ss_pred             cCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceE--EEEEecCCeEEEEEeccCCCcceeeccCC----ce
Confidence            46789999999987543 3344444466677789999999987  8999999999999999877 899999998    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.++.|+. +..+++|+.|.+++++.
T Consensus       392 vl~vdW~~-~~~IvSGGaD~~l~i~~  416 (423)
T KOG0313|consen  392 VLSVDWNE-GGLIVSGGADNKLRIFK  416 (423)
T ss_pred             EEEEeccC-CceEEeccCcceEEEec
Confidence            99999985 56899999999999873

>KOG0306|consensus

Probab=99.58  E-value=1e-14  Score=94.56  Aligned_cols=97  Identities=15%  Similarity=0.281  Sum_probs=88.5

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      .|+++|..|++|-+.-|.|  ......|.+.+.++.|.|....   +.+++.|+.++-||-..-..+.++.+|.    ..
T Consensus       566 vTgSADKnVKiWGLdFGDC--HKS~fAHdDSvm~V~F~P~~~~---FFt~gKD~kvKqWDg~kFe~iq~L~~H~----~e  636 (888)
T KOG0306|consen  566 VTGSADKNVKIWGLDFGDC--HKSFFAHDDSVMSVQFLPKTHL---FFTCGKDGKVKQWDGEKFEEIQKLDGHH----SE  636 (888)
T ss_pred             EeccCCCceEEeccccchh--hhhhhcccCceeEEEEccccee---EEEecCcceEEeechhhhhhheeeccch----he
Confidence            3788999999999999999  6666667777889999997777   8999999999999999889999999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |+|++.+|+|.+++|++.|..|++|.
T Consensus       637 v~cLav~~~G~~vvs~shD~sIRlwE  662 (888)
T KOG0306|consen  637 VWCLAVSPNGSFVVSSSHDKSIRLWE  662 (888)
T ss_pred             eeeeEEcCCCCeEEeccCCceeEeee
Confidence            99999999999999999999999994

>KOG1034|consensus

Probab=99.57  E-value=1.8e-14  Score=86.09  Aligned_cols=94  Identities=24%  Similarity=0.313  Sum_probs=79.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec---cccccCCCCe
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---AHRKKFDESI   81 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~v   81 (106)
                      .-|.|+|.|+.++++...+..  |...+..+.+.|.....  +++++.|..|++|++++..|+..+-   +|+    +.|
T Consensus       113 ~~GvIrVid~~~~~~~~~~~g--hG~sINeik~~p~~~ql--vls~SkD~svRlwnI~~~~Cv~VfGG~egHr----deV  184 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQCSKNYRG--HGGSINEIKFHPDRPQL--VLSASKDHSVRLWNIQTDVCVAVFGGVEGHR----DEV  184 (385)
T ss_pred             ceeEEEEEecchhhhccceec--cCccchhhhcCCCCCcE--EEEecCCceEEEEeccCCeEEEEeccccccc----CcE
Confidence            358899999999888555544  34457779999987765  7899999999999999999887664   455    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++.|++++..++||+-|..+.+|+
T Consensus       185 LSvD~~~~gd~i~ScGmDhslk~W~  209 (385)
T KOG1034|consen  185 LSVDFSLDGDRIASCGMDHSLKLWR  209 (385)
T ss_pred             EEEEEcCCCCeeeccCCcceEEEEe
Confidence            9999999999999999999999996

>KOG0275|consensus

Probab=99.57  E-value=2.9e-15  Score=89.81  Aligned_cols=97  Identities=14%  Similarity=0.280  Sum_probs=82.2

Q ss_pred             CcCCCceEEEEeCccCceeeecccCC------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-ccc
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPE------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHR   74 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~   74 (106)
                      +.+-||.|-+||..+|+.-..+..+.      ....+.++.|+.+++.   +++|+.||.|++|.+.+|.|++.+. +|.
T Consensus       230 sgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEM---lAsGsqDGkIKvWri~tG~ClRrFdrAHt  306 (508)
T KOG0275|consen  230 SGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEM---LASGSQDGKIKVWRIETGQCLRRFDRAHT  306 (508)
T ss_pred             eccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHH---hhccCcCCcEEEEEEecchHHHHhhhhhc
Confidence            45679999999999988744343332      3455677888888888   8999999999999999999999996 777


Q ss_pred             ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         75 KKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                          .+|+++.|+.|+..+.+++.|.++++.
T Consensus       307 ----kGvt~l~FSrD~SqiLS~sfD~tvRiH  333 (508)
T KOG0275|consen  307 ----KGVTCLSFSRDNSQILSASFDQTVRIH  333 (508)
T ss_pred             ----cCeeEEEEccCcchhhcccccceEEEe
Confidence                899999999999999999999999874

>KOG0645|consensus

Probab=99.56  E-value=9.7e-14  Score=81.15  Aligned_cols=98  Identities=16%  Similarity=0.288  Sum_probs=82.1

Q ss_pred             CcCCCceEEEEeCccCceeeec-ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---ccchheeccccccC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARN-DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---KTCVQEITAHRKKF   77 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~   77 (106)
                      ++.+|..|=||.+..+...... .++.|...+..+.|+|....   |++++.|.+|++|.-..   -.+..++.+|.   
T Consensus       122 TCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl---L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~---  195 (312)
T KOG0645|consen  122 TCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL---LFSCSYDNTIKVYRDEDDDDWECVQTLDGHE---  195 (312)
T ss_pred             EeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce---eEEeccCCeEEEEeecCCCCeeEEEEecCcc---
Confidence            5789999999999865543332 33446667888999998888   89999999999997662   25788999998   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       .-|++++|++.|..+++++.|++++||.
T Consensus       196 -~TVW~~~F~~~G~rl~s~sdD~tv~Iw~  223 (312)
T KOG0645|consen  196 -NTVWSLAFDNIGSRLVSCSDDGTVSIWR  223 (312)
T ss_pred             -ceEEEEEecCCCceEEEecCCcceEeee
Confidence             8999999999999999999999999983

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.56  E-value=5.7e-14  Score=94.24  Aligned_cols=97  Identities=12%  Similarity=0.203  Sum_probs=74.5

Q ss_pred             cCCCceEEEEeCccCc----eee--ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135          3 KVPSSVIYIWTLLELQ----TYA--RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~   76 (106)
                      ...|++|+|||+....    ...  ..... +...+..+.|.+.....  +++++.|+.|++||+.+++.+..+..|.  
T Consensus       501 gg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~--las~~~Dg~v~lWd~~~~~~~~~~~~H~--  575 (793)
T PLN00181        501 AGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQ--VASSNFEGVVQVWDVARSQLVTEMKEHE--  575 (793)
T ss_pred             EeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCE--EEEEeCCCeEEEEECCCCeEEEEecCCC--
Confidence            4679999999986421    100  01111 23345667888764333  7999999999999999998888888888  


Q ss_pred             CCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                        ..|++++|+| ++..|++|+.|++|++||
T Consensus       576 --~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd  604 (793)
T PLN00181        576 --KRVWSIDYSSADPTLLASGSDDGSVKLWS  604 (793)
T ss_pred             --CCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence              8999999997 788999999999999997

>KOG0316|consensus

Probab=99.56  E-value=6.4e-14  Score=80.78  Aligned_cols=100  Identities=14%  Similarity=0.202  Sum_probs=72.2

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheecccc-----
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHR-----   74 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~-----   74 (106)
                      .+..|..|.+||+.+|+...++..  |...++.+.|+..+..   +++|+.|.++++||.+..  ++++.+....     
T Consensus        76 s~GgDk~v~vwDV~TGkv~Rr~rg--H~aqVNtV~fNeesSV---v~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~S  150 (307)
T KOG0316|consen   76 SCGGDKAVQVWDVNTGKVDRRFRG--HLAQVNTVRFNEESSV---VASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSS  150 (307)
T ss_pred             cCCCCceEEEEEcccCeeeeeccc--ccceeeEEEecCcceE---EEeccccceeEEEEcccCCCCccchhhhhcCceeE
Confidence            367899999999999999777776  4566888999888877   899999999999999865  3455444332     


Q ss_pred             -------c----------------------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 -------K----------------------KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 -------~----------------------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                             .                      -....|+++.|+++++....++-|+++++-|
T Consensus       151 i~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlD  211 (307)
T KOG0316|consen  151 IDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLD  211 (307)
T ss_pred             EEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecc
Confidence                   0                      0224566666666666666666666666543

>KOG0265|consensus

Probab=99.56  E-value=2.2e-14  Score=84.74  Aligned_cols=94  Identities=15%  Similarity=0.292  Sum_probs=82.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+++++||+++.+++..+..   ......+.|...+..   +.+|+-|+.|++||++....+..+.+|.    +.|+
T Consensus       151 gsdD~t~kl~D~R~k~~~~t~~~---kyqltAv~f~d~s~q---v~sggIdn~ikvWd~r~~d~~~~lsGh~----DtIt  220 (338)
T KOG0265|consen  151 GSDDGTLKLWDIRKKEAIKTFEN---KYQLTAVGFKDTSDQ---VISGGIDNDIKVWDLRKNDGLYTLSGHA----DTIT  220 (338)
T ss_pred             cCCCceEEEEeecccchhhcccc---ceeEEEEEecccccc---eeeccccCceeeeccccCcceEEeeccc----Ccee
Confidence            46899999999998887666544   234566788888877   7999999999999999999999999999    9999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..+|++..+.+-+-|.++++||
T Consensus       221 ~lsls~~gs~llsnsMd~tvrvwd  244 (338)
T KOG0265|consen  221 GLSLSRYGSFLLSNSMDNTVRVWD  244 (338)
T ss_pred             eEEeccCCCccccccccceEEEEE
Confidence            999999999999999999999997

>KOG0643|consensus

Probab=99.55  E-value=5.6e-14  Score=82.15  Aligned_cols=99  Identities=15%  Similarity=0.170  Sum_probs=78.6

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCC---------------------------------------------------CC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPE---------------------------------------------------LN   29 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~---------------------------------------------------~~   29 (106)
                      |+..+|.++++||+.+|+.+..++...                                                   +.
T Consensus        68 iTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~  147 (327)
T KOG0643|consen   68 ITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD  147 (327)
T ss_pred             eeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc
Confidence            567889999999998888755443321                                                   22


Q ss_pred             CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+..+.|.|.+..   +++|.+||.|..||+++|+. +.....|.    ..|+.+.++++..+++++|.|.+.++||
T Consensus       148 skit~a~Wg~l~~~---ii~Ghe~G~is~~da~~g~~~v~s~~~h~----~~Ind~q~s~d~T~FiT~s~Dttakl~D  218 (327)
T KOG0643|consen  148 SKITSALWGPLGET---IIAGHEDGSISIYDARTGKELVDSDEEHS----SKINDLQFSRDRTYFITGSKDTTAKLVD  218 (327)
T ss_pred             cceeeeeecccCCE---EEEecCCCcEEEEEcccCceeeechhhhc----cccccccccCCcceEEecccCccceeee
Confidence            33455667777777   89999999999999999864 44456677    7999999999999999999999999987

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.55  E-value=1.3e-13  Score=80.96  Aligned_cols=94  Identities=22%  Similarity=0.415  Sum_probs=77.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+..+..  +...+..+.|.|.+..   +++++.++.+++|++.+++....+..|.    ..+.+
T Consensus       196 ~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~---~~~~~~~~~i~i~~~~~~~~~~~~~~~~----~~i~~  266 (289)
T cd00200         196 SSDGTIKLWDLSTGKCLGTLRG--HENGVNSVAFSPDGYL---LASGSEDGTIRVWDLRTGECVQTLSGHT----NSVTS  266 (289)
T ss_pred             cCCCcEEEEECCCCceecchhh--cCCceEEEEEcCCCcE---EEEEcCCCcEEEEEcCCceeEEEccccC----CcEEE
Confidence            3489999999998887555432  3445667888887444   6778889999999999888888888777    79999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|+|++..+++++.|+.+++|+
T Consensus       267 ~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         267 LAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EEECCCCCEEEEecCCCeEEecC
Confidence            99999999999999999999997

>KOG0303|consensus

Probab=99.55  E-value=3.1e-14  Score=86.85  Aligned_cols=98  Identities=12%  Similarity=0.226  Sum_probs=81.2

Q ss_pred             CcCCCceEEEEeCccCceeeecc-----cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135          2 QKVPSSVIYIWTLLELQTYARND-----CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK   76 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~   76 (106)
                      +++.|.+|.||.+-.+.....+.     +..|...+..+.|+|.-...  |++++.|.+|.+|++.+|..+-++. |+  
T Consensus        99 SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NV--Llsag~Dn~v~iWnv~tgeali~l~-hp--  173 (472)
T KOG0303|consen   99 SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNV--LLSAGSDNTVSIWNVGTGEALITLD-HP--  173 (472)
T ss_pred             cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhh--HhhccCCceEEEEeccCCceeeecC-CC--
Confidence            35789999999997655433222     22256667779999987765  7899999999999999999887777 88  


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        +.|.++.|+-+|..+++.+.|..|++||
T Consensus       174 --d~i~S~sfn~dGs~l~TtckDKkvRv~d  201 (472)
T KOG0303|consen  174 --DMVYSMSFNRDGSLLCTTCKDKKVRVID  201 (472)
T ss_pred             --CeEEEEEeccCCceeeeecccceeEEEc
Confidence              8999999999999999999999999997

>KOG0283|consensus

Probab=99.55  E-value=3.4e-14  Score=92.34  Aligned_cols=95  Identities=14%  Similarity=0.170  Sum_probs=80.2

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +..-|.||++|++....++..|.   |+..+.++.|+|.....  +++|+-|+.+|||++...+.+.....+     .-|
T Consensus       385 SSSMDKTVRLWh~~~~~CL~~F~---HndfVTcVaFnPvDDry--FiSGSLD~KvRiWsI~d~~Vv~W~Dl~-----~lI  454 (712)
T KOG0283|consen  385 SSSMDKTVRLWHPGRKECLKVFS---HNDFVTCVAFNPVDDRY--FISGSLDGKVRLWSISDKKVVDWNDLR-----DLI  454 (712)
T ss_pred             eccccccEEeecCCCcceeeEEe---cCCeeEEEEecccCCCc--EeecccccceEEeecCcCeeEeehhhh-----hhh
Confidence            45679999999999999866555   57778889999987765  899999999999999877755444433     689


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++.|+|+|...+.|+.+|.+++|+
T Consensus       455 TAvcy~PdGk~avIGt~~G~C~fY~  479 (712)
T KOG0283|consen  455 TAVCYSPDGKGAVIGTFNGYCRFYD  479 (712)
T ss_pred             eeEEeccCCceEEEEEeccEEEEEE
Confidence            9999999999999999999999874

>KOG0274|consensus

Probab=99.55  E-value=5.8e-14  Score=90.34  Aligned_cols=91  Identities=11%  Similarity=0.212  Sum_probs=75.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      +.|.+|++|++.+++.+..+..  |...+.++...  ...   +++|+.|++|++||+.++++++.+.+|.    ..|.+
T Consensus       308 s~D~tVkVW~v~n~~~l~l~~~--h~~~V~~v~~~--~~~---lvsgs~d~~v~VW~~~~~~cl~sl~gH~----~~V~s  376 (537)
T KOG0274|consen  308 SRDNTVKVWDVTNGACLNLLRG--HTGPVNCVQLD--EPL---LVSGSYDGTVKVWDPRTGKCLKSLSGHT----GRVYS  376 (537)
T ss_pred             cCCceEEEEeccCcceEEEecc--ccccEEEEEec--CCE---EEEEecCceEEEEEhhhceeeeeecCCc----ceEEE
Confidence            5789999999998888666655  44445445433  444   7999999999999999999999999999    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+.+. ..+++|+.|++|++||
T Consensus       377 l~~~~~-~~~~Sgs~D~~IkvWd  398 (537)
T KOG0274|consen  377 LIVDSE-NRLLSGSLDTTIKVWD  398 (537)
T ss_pred             EEecCc-ceEEeeeeccceEeec
Confidence            988654 8899999999999997

>KOG0640|consensus

Probab=99.54  E-value=3.8e-14  Score=84.55  Aligned_cols=101  Identities=11%  Similarity=0.174  Sum_probs=78.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...+|++|+++|+........++.......+.++.|+|.+..   ++.|.....+++||+++-+|...-. +...|.+.|
T Consensus       189 S~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGef---llvgTdHp~~rlYdv~T~Qcfvsan-Pd~qht~ai  264 (430)
T KOG0640|consen  189 SGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEF---LLVGTDHPTLRLYDVNTYQCFVSAN-PDDQHTGAI  264 (430)
T ss_pred             eccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCce---EEEecCCCceeEEeccceeEeeecC-cccccccce
Confidence            457899999999976443223333222334677999999988   8899999999999999988754433 222344899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++.|++.+...++++.||.|++||
T Consensus       265 ~~V~Ys~t~~lYvTaSkDG~IklwD  289 (430)
T KOG0640|consen  265 TQVRYSSTGSLYVTASKDGAIKLWD  289 (430)
T ss_pred             eEEEecCCccEEEEeccCCcEEeec
Confidence            9999999999999999999999998

>KOG0640|consensus

Probab=99.54  E-value=6.3e-14  Score=83.61  Aligned_cols=95  Identities=17%  Similarity=0.345  Sum_probs=80.0

Q ss_pred             CceEEEEeCccCceeeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~   83 (106)
                      -.++++||+++.++......+ .|...+..+.+++.+..   .++++.||.|++||--.++|+.++. +|.+   ..|++
T Consensus       237 Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~l---YvTaSkDG~IklwDGVS~rCv~t~~~AH~g---sevcS  310 (430)
T KOG0640|consen  237 HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSL---YVTASKDGAIKLWDGVSNRCVRTIGNAHGG---SEVCS  310 (430)
T ss_pred             CCceeEEeccceeEeeecCcccccccceeEEEecCCccE---EEEeccCCcEEeeccccHHHHHHHHhhcCC---ceeee
Confidence            467999999999987665443 35555666888888777   7999999999999999999999985 4553   78999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|..+++++.+++.|..+++|.
T Consensus       311 a~Ftkn~kyiLsSG~DS~vkLWE  333 (430)
T KOG0640|consen  311 AVFTKNGKYILSSGKDSTVKLWE  333 (430)
T ss_pred             EEEccCCeEEeecCCcceeeeee
Confidence            99999999999999999999995

>KOG4283|consensus

Probab=99.53  E-value=4e-14  Score=83.89  Aligned_cols=99  Identities=17%  Similarity=0.270  Sum_probs=79.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheecccc--------
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHR--------   74 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~--------   74 (106)
                      .+|.+|++-|+++|..  ...+..|..++..+.|+|..+..  |++|+.||.+++||++.. .|...+..|.        
T Consensus       165 tr~~~VrLCDi~SGs~--sH~LsGHr~~vlaV~Wsp~~e~v--LatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~  240 (397)
T KOG4283|consen  165 TRDVQVRLCDIASGSF--SHTLSGHRDGVLAVEWSPSSEWV--LATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILK  240 (397)
T ss_pred             cCCCcEEEEeccCCcc--eeeeccccCceEEEEeccCceeE--EEecCCCceEEEEEeecccceeEEeecccCccCcccc
Confidence            4688999999999999  44444467888999999999886  899999999999999864 3444333322        


Q ss_pred             --ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 --KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 --~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        ..|.+.++.++|+.++.++++++.|..+++|.
T Consensus       241 ~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn  274 (397)
T KOG4283|consen  241 TNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWN  274 (397)
T ss_pred             ccccccceeeeeeecccchhhhhccCccceEEee
Confidence              11337899999999999999999999999994

>KOG0274|consensus

Probab=99.53  E-value=8.3e-14  Score=89.64  Aligned_cols=91  Identities=19%  Similarity=0.342  Sum_probs=74.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|.++++||+.++++...+..  |.+ ...+...  ....  +++|+.|.+|++|++.+++++..+.+|.    ..|.
T Consensus       267 gS~D~t~rvWd~~sg~C~~~l~g--h~s-tv~~~~~--~~~~--~~sgs~D~tVkVW~v~n~~~l~l~~~h~----~~V~  335 (537)
T KOG0274|consen  267 GSTDKTERVWDCSTGECTHSLQG--HTS-SVRCLTI--DPFL--LVSGSRDNTVKVWDVTNGACLNLLRGHT----GPVN  335 (537)
T ss_pred             EecCCcEEeEecCCCcEEEEecC--CCc-eEEEEEc--cCce--EeeccCCceEEEEeccCcceEEEecccc----ccEE
Confidence            45699999999999999777765  333 3333322  2222  6889999999999999999999999988    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.++  +..+++|+.|++|++||
T Consensus       336 ~v~~~--~~~lvsgs~d~~v~VW~  357 (537)
T KOG0274|consen  336 CVQLD--EPLLVSGSYDGTVKVWD  357 (537)
T ss_pred             EEEec--CCEEEEEecCceEEEEE
Confidence            99997  78999999999999996

>KOG0318|consensus

Probab=99.52  E-value=2.8e-13  Score=85.12  Aligned_cols=101  Identities=17%  Similarity=0.173  Sum_probs=83.1

Q ss_pred             cCCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-------
Q psy17135          3 KVPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-------   74 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-------   74 (106)
                      -..||+|.+||=++++.+..+. ...|...+..+.|+|++..   ++|++.|.++++||+.+.++++++.-..       
T Consensus       208 ~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~---~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqv  284 (603)
T KOG0318|consen  208 AGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQ---FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQV  284 (603)
T ss_pred             ecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCce---EEEecCCceEEEEEeeccceEEEeecCCchhceEE
Confidence            3579999999999999977776 3456777888999999999   8999999999999988776654432110       


Q ss_pred             --------------------------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 --------------------------------KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 --------------------------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                      .+|...|+++..+|++.+|.||+.||.|.-|+
T Consensus       285 G~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~  348 (603)
T KOG0318|consen  285 GCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWD  348 (603)
T ss_pred             EEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEe
Confidence                                            02457999999999999999999999999886

>KOG0310|consensus

Probab=99.52  E-value=4.3e-14  Score=87.67  Aligned_cols=95  Identities=12%  Similarity=0.195  Sum_probs=77.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      -..|.|+++|+++...  ......|+..+....|.|.....  +++|+.|+.+++||+.+......+.+|.    +.|.+
T Consensus        87 D~sG~V~vfD~k~r~i--LR~~~ah~apv~~~~f~~~d~t~--l~s~sDd~v~k~~d~s~a~v~~~l~~ht----DYVR~  158 (487)
T KOG0310|consen   87 DESGHVKVFDMKSRVI--LRQLYAHQAPVHVTKFSPQDNTM--LVSGSDDKVVKYWDLSTAYVQAELSGHT----DYVRC  158 (487)
T ss_pred             CCcCcEEEeccccHHH--HHHHhhccCceeEEEecccCCeE--EEecCCCceEEEEEcCCcEEEEEecCCc----ceeEe
Confidence            3578999999776333  22333456667778899988876  7899999999999999888655788898    99999


Q ss_pred             EEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      .+++|-. ..++|||.||+|++||
T Consensus       159 g~~~~~~~hivvtGsYDg~vrl~D  182 (487)
T KOG0310|consen  159 GDISPANDHIVVTGSYDGKVRLWD  182 (487)
T ss_pred             eccccCCCeEEEecCCCceEEEEE
Confidence            9999954 4799999999999997

>KOG0269|consensus

Probab=99.52  E-value=4.7e-14  Score=91.63  Aligned_cols=99  Identities=19%  Similarity=0.228  Sum_probs=80.1

Q ss_pred             CcCCCceEEEEeCccCceeee-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYAR-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ++.+.|.|.+||+........ ...-.|...+..+.|++.....  |++|+.||.|++||++..+...++.+..    ..
T Consensus       105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~i--liSGSQDg~vK~~DlR~~~S~~t~~~nS----ES  178 (839)
T KOG0269|consen  105 TCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNI--LISGSQDGTVKCWDLRSKKSKSTFRSNS----ES  178 (839)
T ss_pred             eecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccE--EEecCCCceEEEEeeecccccccccccc----hh
Confidence            567899999999987322111 1223355567889999988886  8899999999999999988888887766    79


Q ss_pred             eEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      |..++|+| .+..++++...|.+++||
T Consensus       179 iRDV~fsp~~~~~F~s~~dsG~lqlWD  205 (839)
T KOG0269|consen  179 IRDVKFSPGYGNKFASIHDSGYLQLWD  205 (839)
T ss_pred             hhceeeccCCCceEEEecCCceEEEee
Confidence            99999999 667799999999999998

>KOG0288|consensus

Probab=99.52  E-value=1.2e-13  Score=84.60  Aligned_cols=100  Identities=11%  Similarity=0.141  Sum_probs=81.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccC--CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCP--ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      ++++|.++.+.|+++.+....+.-.  ........+.|+|.+.+   +++|++||.|+||++.++++...+......  .
T Consensus       358 sssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Y---vaAGS~dgsv~iW~v~tgKlE~~l~~s~s~--~  432 (459)
T KOG0288|consen  358 SSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSY---VAAGSADGSVYIWSVFTGKLEKVLSLSTSN--A  432 (459)
T ss_pred             eecCCCceeeeecccccEEEEeeccccccccccceeEECCCCce---eeeccCCCcEEEEEccCceEEEEeccCCCC--c
Confidence            5689999999999998775544322  12234566889999999   899999999999999999998887665521  3


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|++++|+|.|..+++++.++.+.+|.
T Consensus       433 aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  433 AITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             ceEEEEEcCCCchhhcccCCcceEecC
Confidence            699999999999999999999999994

>KOG1007|consensus

Probab=99.52  E-value=5.3e-14  Score=83.09  Aligned_cols=96  Identities=20%  Similarity=0.325  Sum_probs=78.4

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~   82 (106)
                      ..|+++..||+++........-. |...+..+.|+|..+..  +++|+.|+.|++||.++. .++..+..|.    --|+
T Consensus       190 t~d~tl~~~D~RT~~~~~sI~dA-Hgq~vrdlDfNpnkq~~--lvt~gDdgyvriWD~R~tk~pv~el~~Hs----HWvW  262 (370)
T KOG1007|consen  190 TSDSTLQFWDLRTMKKNNSIEDA-HGQRVRDLDFNPNKQHI--LVTCGDDGYVRIWDTRKTKFPVQELPGHS----HWVW  262 (370)
T ss_pred             eCCCcEEEEEccchhhhcchhhh-hcceeeeccCCCCceEE--EEEcCCCccEEEEeccCCCccccccCCCc----eEEE
Confidence            36899999999998874444433 33346778999988876  899999999999999974 5788999998    7999


Q ss_pred             EEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPS-KPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~-~~~~~s~~~d~~i~iwd  106 (106)
                      ++.|+|. ..++.+++.|..|.+|.
T Consensus       263 ~VRfn~~hdqLiLs~~SDs~V~Lsc  287 (370)
T KOG1007|consen  263 AVRFNPEHDQLILSGGSDSAVNLSC  287 (370)
T ss_pred             EEEecCccceEEEecCCCceeEEEe
Confidence            9999994 45689999999998873

>KOG1407|consensus

Probab=99.52  E-value=2.7e-13  Score=79.06  Aligned_cols=95  Identities=21%  Similarity=0.278  Sum_probs=73.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc----------------
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT----------------   65 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~----------------   65 (106)
                      +-.+|.+|++||.+.+++......   ..+-..+.|+|.+++   ++.++.|-.|.+.|.++.+                
T Consensus        82 tas~dk~ir~wd~r~~k~~~~i~~---~~eni~i~wsp~g~~---~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w  155 (313)
T KOG1407|consen   82 TASGDKTIRIWDIRSGKCTARIET---KGENINITWSPDGEY---IAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISW  155 (313)
T ss_pred             EecCCceEEEEEeccCcEEEEeec---cCcceEEEEcCCCCE---EEEecCcccEEEEEecccceeehhcccceeeeeee
Confidence            446789999999999999666655   334456788898888   6777777777777755432                


Q ss_pred             -------------------------chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 -------------------------CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 -------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                               ++..+++|+    ....|+.|+|+|+++|+|+.|..+.+||
T Consensus       156 ~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~----snCicI~f~p~GryfA~GsADAlvSLWD  217 (313)
T KOG1407|consen  156 NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP----SNCICIEFDPDGRYFATGSADALVSLWD  217 (313)
T ss_pred             cCCCCEEEEecCCceEEEEeccccccccccccCC----cceEEEEECCCCceEeeccccceeeccC
Confidence                                     223344555    8899999999999999999999999998

>KOG0308|consensus

Probab=99.52  E-value=1.1e-13  Score=88.67  Aligned_cols=95  Identities=14%  Similarity=0.226  Sum_probs=75.5

Q ss_pred             CCceEEEEeCccCce--eeeccc------C-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135          5 PSSVIYIWTLLELQT--YARNDC------P-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~--~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      =|+.|.+||+.++..  +..+..      . .+...+.+++.++.+..   +++|+.++-+++||.++++.+-.+.+|. 
T Consensus       138 LD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~---ivsGgtek~lr~wDprt~~kimkLrGHT-  213 (735)
T KOG0308|consen  138 LDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTI---IVSGGTEKDLRLWDPRTCKKIMKLRGHT-  213 (735)
T ss_pred             CCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceE---EEecCcccceEEeccccccceeeeeccc-
Confidence            478999999998732  222211      1 12333455666666644   8999999999999999999888899999 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.++..+++|..++|++.||+|++||
T Consensus       214 ---dNVr~ll~~dDGt~~ls~sSDgtIrlWd  241 (735)
T KOG0308|consen  214 ---DNVRVLLVNDDGTRLLSASSDGTIRLWD  241 (735)
T ss_pred             ---cceEEEEEcCCCCeEeecCCCceEEeee
Confidence               8999999999999999999999999997

>KOG0310|consensus

Probab=99.51  E-value=2.1e-13  Score=84.71  Aligned_cols=94  Identities=22%  Similarity=0.284  Sum_probs=78.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v   81 (106)
                      ...|+.+++||+.+...  ......|.+.+.+..++|.....  ++||+.||.|++||.+.. ..+..+. |.    ..|
T Consensus       129 ~sDd~v~k~~d~s~a~v--~~~l~~htDYVR~g~~~~~~~hi--vvtGsYDg~vrl~DtR~~~~~v~eln-hg----~pV  199 (487)
T KOG0310|consen  129 GSDDKVVKYWDLSTAYV--QAELSGHTDYVRCGDISPANDHI--VVTGSYDGKVRLWDTRSLTSRVVELN-HG----CPV  199 (487)
T ss_pred             cCCCceEEEEEcCCcEE--EEEecCCcceeEeeccccCCCeE--EEecCCCceEEEEEeccCCceeEEec-CC----Cce
Confidence            46789999999998874  55666678889999999987766  789999999999999986 4455554 55    789


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.+-|.|..+++++ ...+++||
T Consensus       200 e~vl~lpsgs~iasAg-Gn~vkVWD  223 (487)
T KOG0310|consen  200 ESVLALPSGSLIASAG-GNSVKVWD  223 (487)
T ss_pred             eeEEEcCCCCEEEEcC-CCeEEEEE
Confidence            9999999999999987 67899997

>KOG0302|consensus

Probab=99.51  E-value=1.2e-13  Score=83.90  Aligned_cols=95  Identities=18%  Similarity=0.251  Sum_probs=73.2

Q ss_pred             CceEEEEeCccCceeee-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh--eeccccccCCCCeE
Q psy17135          6 SSVIYIWTLLELQTYAR-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ--EITAHRKKFDESIL   82 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~~~v~   82 (106)
                      -+.|++|...++....- ...-.|+..+-.+.|+|.....  |++|+.|++|+|||++.++...  ...+|.    ..|+
T Consensus       233 ~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~v--faScS~DgsIrIWDiRs~~~~~~~~~kAh~----sDVN  306 (440)
T KOG0302|consen  233 VKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGV--FASCSCDGSIRIWDIRSGPKKAAVSTKAHN----SDVN  306 (440)
T ss_pred             ccceEeeeeccCceeecCccccccccchhhhccCCccCce--EEeeecCceEEEEEecCCCccceeEeeccC----Ccee
Confidence            45689999988665221 1222255566678999977665  7999999999999999884322  225676    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.|+-...+|++|+.||+++|||
T Consensus       307 VISWnr~~~lLasG~DdGt~~iwD  330 (440)
T KOG0302|consen  307 VISWNRREPLLASGGDDGTLSIWD  330 (440)
T ss_pred             eEEccCCcceeeecCCCceEEEEE
Confidence            999999888999999999999997

>KOG0639|consensus

Probab=99.51  E-value=6.5e-14  Score=87.91  Aligned_cols=92  Identities=21%  Similarity=0.323  Sum_probs=74.6

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCC--CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEP--PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      -.++.|||+.....  +.+-+......  ..+..+|+...   .+++..||.|.|||+.+...++++++|.    +++.|
T Consensus       486 astlsiWDLAapTp--rikaeltssapaCyALa~spDakv---cFsccsdGnI~vwDLhnq~~VrqfqGht----DGasc  556 (705)
T KOG0639|consen  486 ASTLSIWDLAAPTP--RIKAELTSSAPACYALAISPDAKV---CFSCCSDGNIAVWDLHNQTLVRQFQGHT----DGASC  556 (705)
T ss_pred             cceeeeeeccCCCc--chhhhcCCcchhhhhhhcCCccce---eeeeccCCcEEEEEcccceeeecccCCC----CCcee
Confidence            45799999998776  44333222211  22455666665   6888999999999999999999999999    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.++++|..|.+|+.|.++|-||
T Consensus       557 Idis~dGtklWTGGlDntvRcWD  579 (705)
T KOG0639|consen  557 IDISKDGTKLWTGGLDNTVRCWD  579 (705)
T ss_pred             EEecCCCceeecCCCccceeehh
Confidence            99999999999999999999997

>KOG0283|consensus

Probab=99.50  E-value=5.4e-14  Score=91.42  Aligned_cols=70  Identities=20%  Similarity=0.398  Sum_probs=60.5

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      |...+..+.|+..+ .   |+++++|.+||+|++....|++.+. |.    +.|+|++|+| |.++++||+-|+.+|||.
T Consensus       368 Ht~DILDlSWSKn~-f---LLSSSMDKTVRLWh~~~~~CL~~F~-Hn----dfVTcVaFnPvDDryFiSGSLD~KvRiWs  438 (712)
T KOG0283|consen  368 HTADILDLSWSKNN-F---LLSSSMDKTVRLWHPGRKECLKVFS-HN----DFVTCVAFNPVDDRYFISGSLDGKVRLWS  438 (712)
T ss_pred             cchhheecccccCC-e---eEeccccccEEeecCCCcceeeEEe-cC----CeeEEEEecccCCCcEeecccccceEEee
Confidence            55556667776643 3   7999999999999999899998886 77    8999999999 889999999999999995

>KOG0322|consensus

Probab=99.50  E-value=1.2e-13  Score=80.70  Aligned_cols=96  Identities=18%  Similarity=0.254  Sum_probs=76.4

Q ss_pred             CCCceEEEEeCcc--CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          4 VPSSVIYIWTLLE--LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      .++..+..|.++.  +.+..+......+.++..+..-|++..   ++|++.|+.+|+|+.++.+++..+.-|.    +.|
T Consensus       224 ga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KI---lATAGWD~RiRVyswrtl~pLAVLkyHs----agv  296 (323)
T KOG0322|consen  224 GADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKI---LATAGWDHRIRVYSWRTLNPLAVLKYHS----AGV  296 (323)
T ss_pred             CccccceeeeeccccCcccccceEEecCCCccceEEccCCcE---EeecccCCcEEEEEeccCCchhhhhhhh----cce
Confidence            4556677888764  343222222223445666666777766   8999999999999999999999999998    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|+...+|+++.|.+|.+|+
T Consensus       297 n~vAfspd~~lmAaaskD~rISLWk  321 (323)
T KOG0322|consen  297 NAVAFSPDCELMAAASKDARISLWK  321 (323)
T ss_pred             eEEEeCCCCchhhhccCCceEEeee
Confidence            9999999999999999999999996

>KOG0268|consensus

Probab=99.50  E-value=4.6e-14  Score=85.32  Aligned_cols=93  Identities=14%  Similarity=0.176  Sum_probs=80.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v   81 (106)
                      +..|+.|.+||++...++.....   .-..+.++|+|..-.   ++++++|..+..+|++. ..++..+.+|.    +.|
T Consensus       206 ~~sDrsIvLyD~R~~~Pl~KVi~---~mRTN~IswnPeafn---F~~a~ED~nlY~~DmR~l~~p~~v~~dhv----sAV  275 (433)
T KOG0268|consen  206 CASDRSIVLYDLRQASPLKKVIL---TMRTNTICWNPEAFN---FVAANEDHNLYTYDMRNLSRPLNVHKDHV----SAV  275 (433)
T ss_pred             eccCCceEEEecccCCccceeee---eccccceecCccccc---eeeccccccceehhhhhhcccchhhcccc----eeE
Confidence            34789999999999999877776   345678999993333   79999999999999987 45788888898    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      .+++|||.|.-++|||.|.+|+||
T Consensus       276 ~dVdfsptG~EfvsgsyDksIRIf  299 (433)
T KOG0268|consen  276 MDVDFSPTGQEFVSGSYDKSIRIF  299 (433)
T ss_pred             EEeccCCCcchhccccccceEEEe
Confidence            999999999999999999999997

>KOG0305|consensus

Probab=99.49  E-value=7.1e-13  Score=83.81  Aligned_cols=96  Identities=18%  Similarity=0.195  Sum_probs=81.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..+|++|++||..+++.+.....   .+.+..+.|++....... .-|..+..|.||++.+-+.+..+.+|.    .+|.
T Consensus       364 Gs~D~~i~fwn~~~g~~i~~vdt---gsQVcsL~Wsk~~kEi~s-thG~s~n~i~lw~~ps~~~~~~l~gH~----~RVl  435 (484)
T KOG0305|consen  364 GSADRCIKFWNTNTGARIDSVDT---GSQVCSLIWSKKYKELLS-THGYSENQITLWKYPSMKLVAELLGHT----SRVL  435 (484)
T ss_pred             CCcccEEEEEEcCCCcEeccccc---CCceeeEEEcCCCCEEEE-ecCCCCCcEEEEeccccceeeeecCCc----ceeE
Confidence            36899999999999998666655   456788999999877311 335667789999999988899999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++++|++..+++|+.|.++++|.
T Consensus       436 ~la~SPdg~~i~t~a~DETlrfw~  459 (484)
T KOG0305|consen  436 YLALSPDGETIVTGAADETLRFWN  459 (484)
T ss_pred             EEEECCCCCEEEEecccCcEEecc
Confidence            999999999999999999999995

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.49  E-value=8.1e-13  Score=77.65  Aligned_cols=93  Identities=22%  Similarity=0.387  Sum_probs=77.0

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .|+.|.+||+.+++....+.  .+...+..+.|.|.+..   +++++.++.+++||+++++.+..+..+.    ..+.++
T Consensus       113 ~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~---l~~~~~~~~i~i~d~~~~~~~~~~~~~~----~~i~~~  183 (289)
T cd00200         113 RDKTIKVWDVETGKCLTTLR--GHTDWVNSVAFSPDGTF---VASSSQDGTIKLWDLRTGKCVATLTGHT----GEVNSV  183 (289)
T ss_pred             CCCeEEEEECCCcEEEEEec--cCCCcEEEEEEcCcCCE---EEEEcCCCcEEEEEccccccceeEecCc----cccceE
Confidence            48999999999887755554  23445677888887554   6777779999999999888888888777    789999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|+|++..+++++.++.+++||
T Consensus       184 ~~~~~~~~l~~~~~~~~i~i~d  205 (289)
T cd00200         184 AFSPDGEKLLSSSSDGTIKLWD  205 (289)
T ss_pred             EECCCcCEEEEecCCCcEEEEE
Confidence            9999999999999999999996

>KOG0306|consensus

Probab=99.47  E-value=4.3e-13  Score=87.26  Aligned_cols=93  Identities=18%  Similarity=0.277  Sum_probs=85.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      +.+.+.|++|+..+.+++..+.+.    .+.++.|.|.+.+   ++.|...|.+.+||+.....+.++++|.    +.++
T Consensus       390 Sga~~SikiWn~~t~kciRTi~~~----y~l~~~Fvpgd~~---Iv~G~k~Gel~vfdlaS~~l~Eti~AHd----gaIW  458 (888)
T KOG0306|consen  390 SGAGESIKIWNRDTLKCIRTITCG----YILASKFVPGDRY---IVLGTKNGELQVFDLASASLVETIRAHD----GAIW  458 (888)
T ss_pred             ecCCCcEEEEEccCcceeEEeccc----cEEEEEecCCCce---EEEeccCCceEEEEeehhhhhhhhhccc----ccee
Confidence            345688999999999998888873    6788999999988   8999999999999999999999999999    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++.+||+..+++||.|.+|++||
T Consensus       459 si~~~pD~~g~vT~saDktVkfWd  482 (888)
T KOG0306|consen  459 SISLSPDNKGFVTGSADKTVKFWD  482 (888)
T ss_pred             eeeecCCCCceEEecCCcEEEEEe
Confidence            999999999999999999999997

>KOG0305|consensus

Probab=99.46  E-value=2.8e-13  Score=85.58  Aligned_cols=96  Identities=18%  Similarity=0.174  Sum_probs=82.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .+.|+.|..+|++..+.... ...+|...+..+.|.+++..   +++|+.|..+.|||.....++..+..|.    ..|.
T Consensus       276 Gsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~---lASGgnDN~~~Iwd~~~~~p~~~~~~H~----aAVK  347 (484)
T KOG0305|consen  276 GSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQ---LASGGNDNVVFIWDGLSPEPKFTFTEHT----AAVK  347 (484)
T ss_pred             ecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCe---eccCCCccceEeccCCCccccEEEeccc----eeee
Confidence            46799999999999888666 45556667777999999998   8999999999999998788888898898    9999


Q ss_pred             EEEEcC-CCCEEEEec--CCCeEEEcC
Q psy17135         83 DVAFHP-SKPFIASAG--ADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~-~~~~~~s~~--~d~~i~iwd  106 (106)
                      +++|+| ....||+|+  .|++|++|+
T Consensus       348 A~awcP~q~~lLAsGGGs~D~~i~fwn  374 (484)
T KOG0305|consen  348 ALAWCPWQSGLLATGGGSADRCIKFWN  374 (484)
T ss_pred             EeeeCCCccCceEEcCCCcccEEEEEE
Confidence            999999 556788866  789999996

>KOG0270|consensus

Probab=99.45  E-value=2.2e-13  Score=83.88  Aligned_cols=73  Identities=18%  Similarity=0.230  Sum_probs=59.4

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      |...+..+.|+..-...  |++|+.|.+|++||+.++++...+..|.    ..|.++.|+| ...++++|+.|+++.+.|
T Consensus       242 HTdavl~Ls~n~~~~nV--LaSgsaD~TV~lWD~~~g~p~~s~~~~~----k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D  315 (463)
T KOG0270|consen  242 HTDAVLALSWNRNFRNV--LASGSADKTVKLWDVDTGKPKSSITHHG----KKVQTLEWHPYEPSVLLSGSYDGTVALKD  315 (463)
T ss_pred             chHHHHHHHhcccccee--EEecCCCceEEEEEcCCCCcceehhhcC----CceeEEEecCCCceEEEeccccceEEeee
Confidence            33333446666554443  7999999999999999999999998777    8999999999 455699999999999876

>KOG0301|consensus

Probab=99.45  E-value=5.3e-13  Score=86.01  Aligned_cols=92  Identities=18%  Similarity=0.268  Sum_probs=77.9

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +..+|.+|++|.-  ++.+..+..  |++.+..+...+...    +++++.||.|+.|++ +|.++..+.+|.    ..+
T Consensus       156 TgsaDKtIklWk~--~~~l~tf~g--HtD~VRgL~vl~~~~----flScsNDg~Ir~w~~-~ge~l~~~~ght----n~v  222 (745)
T KOG0301|consen  156 TGSADKTIKLWKG--GTLLKTFSG--HTDCVRGLAVLDDSH----FLSCSNDGSIRLWDL-DGEVLLEMHGHT----NFV  222 (745)
T ss_pred             eccCcceeeeccC--Cchhhhhcc--chhheeeeEEecCCC----eEeecCCceEEEEec-cCceeeeeeccc----eEE
Confidence            5678999999988  455456766  566666777777655    699999999999999 788898999999    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++++..+++..+++++.|+++++|+
T Consensus       223 Ysis~~~~~~~Ivs~gEDrtlriW~  247 (745)
T KOG0301|consen  223 YSISMALSDGLIVSTGEDRTLRIWK  247 (745)
T ss_pred             EEEEecCCCCeEEEecCCceEEEee
Confidence            9999888889999999999999995

>KOG0289|consensus

Probab=99.45  E-value=1.3e-12  Score=80.62  Aligned_cols=96  Identities=20%  Similarity=0.306  Sum_probs=80.1

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +..+|+.|+|||++++..+.+|..  |.+.+..+.|.-.+-+   ++++..|+.|++||++.-+..+++.....   ..+
T Consensus       364 tgt~d~~vkiwdlks~~~~a~Fpg--ht~~vk~i~FsENGY~---Lat~add~~V~lwDLRKl~n~kt~~l~~~---~~v  435 (506)
T KOG0289|consen  364 TGTPDGVVKIWDLKSQTNVAKFPG--HTGPVKAISFSENGYW---LATAADDGSVKLWDLRKLKNFKTIQLDEK---KEV  435 (506)
T ss_pred             ccCCCceEEEEEcCCccccccCCC--CCCceeEEEeccCceE---EEEEecCCeEEEEEehhhcccceeecccc---ccc
Confidence            346899999999999998667776  5666777888777766   89999999999999999888888876653   579


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..+.|.+.|.+++.++.|=+|+++
T Consensus       436 ~s~~fD~SGt~L~~~g~~l~Vy~~  459 (506)
T KOG0289|consen  436 NSLSFDQSGTYLGIAGSDLQVYIC  459 (506)
T ss_pred             eeEEEcCCCCeEEeecceeEEEEE
Confidence            999999999999999888777765

>KOG1539|consensus

Probab=99.45  E-value=3.6e-13  Score=88.23  Aligned_cols=96  Identities=18%  Similarity=0.234  Sum_probs=84.0

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      |+...+|.+..||.+....+.....   ......+.++.....   ++.+..|-.|+++|..+.+.++.+.+|.    +.
T Consensus       509 vsa~~~Gilkfw~f~~k~l~~~l~l---~~~~~~iv~hr~s~l---~a~~~ddf~I~vvD~~t~kvvR~f~gh~----nr  578 (910)
T KOG1539|consen  509 VSAGADGILKFWDFKKKVLKKSLRL---GSSITGIVYHRVSDL---LAIALDDFSIRVVDVVTRKVVREFWGHG----NR  578 (910)
T ss_pred             EEccCcceEEEEecCCcceeeeecc---CCCcceeeeeehhhh---hhhhcCceeEEEEEchhhhhhHHhhccc----cc
Confidence            3556899999999999887666665   334667777887777   7888999999999999999999999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++++.|||||+++++++-|++|++||
T Consensus       579 itd~~FS~DgrWlisasmD~tIr~wD  604 (910)
T KOG1539|consen  579 ITDMTFSPDGRWLISASMDSTIRTWD  604 (910)
T ss_pred             eeeeEeCCCCcEEEEeecCCcEEEEe
Confidence            99999999999999999999999998

>KOG0641|consensus

Probab=99.45  E-value=2.8e-12  Score=73.97  Aligned_cols=97  Identities=19%  Similarity=0.200  Sum_probs=79.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCC-----CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSE-----PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      .+-|.+|++||++-..++..+....+..+     +..+...|.+..   +++|-.|....+||++.+..++.+..|.   
T Consensus       200 gsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrl---l~sg~~dssc~lydirg~r~iq~f~phs---  273 (350)
T KOG0641|consen  200 GSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRL---LASGHADSSCMLYDIRGGRMIQRFHPHS---  273 (350)
T ss_pred             cCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcce---eeeccCCCceEEEEeeCCceeeeeCCCc---
Confidence            45689999999998888776655443332     333455565555   8999999999999999999999998888   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ..|.++.|+|...++.+|+.|..|++-|
T Consensus       274 -adir~vrfsp~a~yllt~syd~~ikltd  301 (350)
T KOG0641|consen  274 -ADIRCVRFSPGAHYLLTCSYDMKIKLTD  301 (350)
T ss_pred             -cceeEEEeCCCceEEEEecccceEEEee
Confidence             8999999999999999999999998743

>KOG0308|consensus

Probab=99.45  E-value=9.5e-13  Score=84.48  Aligned_cols=91  Identities=18%  Similarity=0.281  Sum_probs=79.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..+.+++||.++.+.+.++.  .|...+..+..++++..   +++++.|++|++||+...+|+.++..|.    ..|+++
T Consensus       191 tek~lr~wDprt~~kimkLr--GHTdNVr~ll~~dDGt~---~ls~sSDgtIrlWdLgqQrCl~T~~vH~----e~VWaL  261 (735)
T KOG0308|consen  191 TEKDLRLWDPRTCKKIMKLR--GHTDNVRVLLVNDDGTR---LLSASSDGTIRLWDLGQQRCLATYIVHK----EGVWAL  261 (735)
T ss_pred             cccceEEeccccccceeeee--ccccceEEEEEcCCCCe---EeecCCCceEEeeeccccceeeeEEecc----CceEEE
Confidence            45789999999999855555  46777778888888888   8999999999999999999999999999    789999


Q ss_pred             EEcCCCCEEEEecCCCeEEE
Q psy17135         85 AFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~i  104 (106)
                      ..+|+-..+.+|++|+.|..
T Consensus       262 ~~~~sf~~vYsG~rd~~i~~  281 (735)
T KOG0308|consen  262 QSSPSFTHVYSGGRDGNIYR  281 (735)
T ss_pred             eeCCCcceEEecCCCCcEEe
Confidence            99999999999999998764

>KOG0296|consensus

Probab=99.44  E-value=1.2e-12  Score=79.18  Aligned_cols=92  Identities=15%  Similarity=0.157  Sum_probs=79.9

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      +|.|+||+..++.....+..  .-..+..+.|+|....   |+.|+.||.+-+|.+.++...+.+.+|.    ..+++=.
T Consensus       127 sG~v~v~~~stg~~~~~~~~--e~~dieWl~WHp~a~i---llAG~~DGsvWmw~ip~~~~~kv~~Gh~----~~ct~G~  197 (399)
T KOG0296|consen  127 SGKVLVFKVSTGGEQWKLDQ--EVEDIEWLKWHPRAHI---LLAGSTDGSVWMWQIPSQALCKVMSGHN----SPCTCGE  197 (399)
T ss_pred             CccEEEEEcccCceEEEeec--ccCceEEEEecccccE---EEeecCCCcEEEEECCCcceeeEecCCC----CCccccc
Confidence            78999999999988555542  2345777899997776   8999999999999999887788899988    8999999


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.|+|+.++++..|++|++|+
T Consensus       198 f~pdGKr~~tgy~dgti~~Wn  218 (399)
T KOG0296|consen  198 FIPDGKRILTGYDDGTIIVWN  218 (399)
T ss_pred             ccCCCceEEEEecCceEEEEe
Confidence            999999999999999999996

>KOG1273|consensus

Probab=99.43  E-value=6.9e-13  Score=79.28  Aligned_cols=69  Identities=12%  Similarity=0.150  Sum_probs=65.3

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...+|.|++.+..   ++.|+.||.|-|||+.+....+.+.+|.    ..|.+++||++|+.|.++++|..+.+||
T Consensus        25 ~a~~~~Fs~~G~~---lAvGc~nG~vvI~D~~T~~iar~lsaH~----~pi~sl~WS~dgr~LltsS~D~si~lwD   93 (405)
T KOG1273|consen   25 LAECCQFSRWGDY---LAVGCANGRVVIYDFDTFRIARMLSAHV----RPITSLCWSRDGRKLLTSSRDWSIKLWD   93 (405)
T ss_pred             ccceEEeccCcce---eeeeccCCcEEEEEccccchhhhhhccc----cceeEEEecCCCCEeeeecCCceeEEEe
Confidence            3788999999998   8999999999999999999889999998    8999999999999999999999999997

>KOG1408|consensus

Probab=99.43  E-value=1.3e-12  Score=85.14  Aligned_cols=95  Identities=17%  Similarity=0.172  Sum_probs=83.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCC-CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELN-SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      -|..|+|||+.+++....|+..+.+ +....+...|.+.+   +++...|+++.++|.-+|.|+.+..+|.    ..|+.
T Consensus       616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY---~atScsdktl~~~Df~sgEcvA~m~GHs----E~VTG  688 (1080)
T KOG1408|consen  616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIY---LATSCSDKTLCFVDFVSGECVAQMTGHS----EAVTG  688 (1080)
T ss_pred             cccceEEEeccccceeeeecccccCCCceEEEEECCCccE---EEEeecCCceEEEEeccchhhhhhcCcc----hheee
Confidence            3778999999999998888886544 33444666777766   8999999999999999999999999999    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|.+|.++|++.+.||+|.+|.
T Consensus       689 ~kF~nDCkHlISvsgDgCIFvW~  711 (1080)
T KOG1408|consen  689 VKFLNDCKHLISVSGDGCIFVWK  711 (1080)
T ss_pred             eeecccchhheeecCCceEEEEE
Confidence            99999999999999999999994

>KOG1188|consensus

Probab=99.43  E-value=1.2e-12  Score=78.67  Aligned_cols=98  Identities=18%  Similarity=0.361  Sum_probs=68.9

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCC-CCCeeEeeeCCCCceEEEee----CCCCcEEEeeCCCccc-hheec-ccc
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNS-EPPACQTIPSSNISLFDSRP----GHDCSIRLWNLDNKTC-VQEIT-AHR   74 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~----~~d~~v~iwd~~~~~~-~~~~~-~~~   74 (106)
                      ++..||+|++||++..+...++....+.. ...++.-....+.   +++|    ..+-.|.+||++..+. ++.+. .|.
T Consensus        89 s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~i---i~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~  165 (376)
T KOG1188|consen   89 SCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNI---IACGTELTRSDASVVLWDVRSEQQLLRQLNESHN  165 (376)
T ss_pred             EeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCe---EEeccccccCceEEEEEEeccccchhhhhhhhcc
Confidence            45789999999999988766665543331 1222222222333   4555    3345689999998765 77764 566


Q ss_pred             ccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                          +.|+++.|+| +-..|+|||.||.+.+||
T Consensus       166 ----DDVT~lrFHP~~pnlLlSGSvDGLvnlfD  194 (376)
T KOG1188|consen  166 ----DDVTQLRFHPSDPNLLLSGSVDGLVNLFD  194 (376)
T ss_pred             ----CcceeEEecCCCCCeEEeecccceEEeee
Confidence                8999999999 556799999999999986

>KOG2111|consensus

Probab=99.43  E-value=2.7e-12  Score=76.55  Aligned_cols=96  Identities=17%  Similarity=0.261  Sum_probs=77.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCccchheeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .-|+|+|-|+...+.-.+.....|.+.+.++.....+..   ++|+|..|+ |||||..+|..+..+.--..  ...+++
T Consensus       157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~---vATaStkGTLIRIFdt~~g~~l~E~RRG~d--~A~iy~  231 (346)
T KOG2111|consen  157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTL---VATASTKGTLIRIFDTEDGTLLQELRRGVD--RADIYC  231 (346)
T ss_pred             ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccE---EEEeccCcEEEEEEEcCCCcEeeeeecCCc--hheEEE
Confidence            458899999976554334555567777777777777777   899999998 68999999999888853321  278999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ++|||+..+++.+|..|++++|
T Consensus       232 iaFSp~~s~LavsSdKgTlHiF  253 (346)
T KOG2111|consen  232 IAFSPNSSWLAVSSDKGTLHIF  253 (346)
T ss_pred             EEeCCCccEEEEEcCCCeEEEE
Confidence            9999999999999999999987

>KOG0267|consensus

Probab=99.42  E-value=2.2e-13  Score=88.23  Aligned_cols=97  Identities=14%  Similarity=0.315  Sum_probs=85.2

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      |...-|+-+.+||.+...+...+..  |...+..+.+.|.+..   ++++++|..+++||...|+.+..+..|+    ..
T Consensus       128 a~gStdtd~~iwD~Rk~Gc~~~~~s--~~~vv~~l~lsP~Gr~---v~~g~ed~tvki~d~~agk~~~ef~~~e----~~  198 (825)
T KOG0267|consen  128 ASGSTDTDLKIWDIRKKGCSHTYKS--HTRVVDVLRLSPDGRW---VASGGEDNTVKIWDLTAGKLSKEFKSHE----GK  198 (825)
T ss_pred             ccccccccceehhhhccCceeeecC--CcceeEEEeecCCCce---eeccCCcceeeeeccccccccccccccc----cc
Confidence            3456788999999998888777766  4445566788888888   8999999999999999999999999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +..+.|+|....+++|+.|+++++||
T Consensus       199 v~sle~hp~e~Lla~Gs~d~tv~f~d  224 (825)
T KOG0267|consen  199 VQSLEFHPLEVLLAPGSSDRTVRFWD  224 (825)
T ss_pred             ccccccCchhhhhccCCCCceeeeec
Confidence            99999999999999999999999997

>KOG1446|consensus

Probab=99.42  E-value=4e-12  Score=75.50  Aligned_cols=98  Identities=12%  Similarity=0.171  Sum_probs=80.1

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ++..|.+++|||..+++.+......+  -++-.+.|......... .+...|.+|+..++.+.+.++.+.+|.    ..|
T Consensus        31 tss~dDsl~LYd~~~g~~~~ti~skk--yG~~~~~Fth~~~~~i~-sStk~d~tIryLsl~dNkylRYF~GH~----~~V  103 (311)
T KOG1446|consen   31 TSSEDDSLRLYDSLSGKQVKTINSKK--YGVDLACFTHHSNTVIH-SSTKEDDTIRYLSLHDNKYLRYFPGHK----KRV  103 (311)
T ss_pred             EecCCCeEEEEEcCCCceeeEeeccc--ccccEEEEecCCceEEE-ccCCCCCceEEEEeecCceEEEcCCCC----ceE
Confidence            45678899999999999977776643  23555666666655222 334558899999999999999999999    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..++.+|-+..++|++.|++|++||
T Consensus       104 ~sL~~sP~~d~FlS~S~D~tvrLWD  128 (311)
T KOG1446|consen  104 NSLSVSPKDDTFLSSSLDKTVRLWD  128 (311)
T ss_pred             EEEEecCCCCeEEecccCCeEEeeE
Confidence            9999999889999999999999998

>KOG0270|consensus

Probab=99.41  E-value=4.1e-12  Score=78.42  Aligned_cols=95  Identities=12%  Similarity=0.116  Sum_probs=74.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v   81 (106)
                      -+.|.+|++||+.++++  .....+|...+.++.|+|.....  +++|+.|++|.+.|.+...+ -..+. -.    +.|
T Consensus       262 gsaD~TV~lWD~~~g~p--~~s~~~~~k~Vq~l~wh~~~p~~--LLsGs~D~~V~l~D~R~~~~s~~~wk-~~----g~V  332 (463)
T KOG0270|consen  262 GSADKTVKLWDVDTGKP--KSSITHHGKKVQTLEWHPYEPSV--LLSGSYDGTVALKDCRDPSNSGKEWK-FD----GEV  332 (463)
T ss_pred             cCCCceEEEEEcCCCCc--ceehhhcCCceeEEEecCCCceE--EEeccccceEEeeeccCccccCceEE-ec----cce
Confidence            46899999999999999  44444667778889999988775  89999999999999995332 22333 22    689


Q ss_pred             EEEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPS-KPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~-~~~~~s~~~d~~i~iwd  106 (106)
                      -.++|.|. ...++.+..||+++-+|
T Consensus       333 Ekv~w~~~se~~f~~~tddG~v~~~D  358 (463)
T KOG0270|consen  333 EKVAWDPHSENSFFVSTDDGTVYYFD  358 (463)
T ss_pred             EEEEecCCCceeEEEecCCceEEeee
Confidence            99999984 45578888999998765

>KOG0268|consensus

Probab=99.40  E-value=6.2e-13  Score=80.55  Aligned_cols=95  Identities=15%  Similarity=0.209  Sum_probs=73.4

Q ss_pred             CCCceEEEEeCccCceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..|..++.+|++....  ...... |.+.+..+.|+|.+..   +++||.|.+|+||..+.+..-..+.....   ..|+
T Consensus       248 ~ED~nlY~~DmR~l~~--p~~v~~dhvsAV~dVdfsptG~E---fvsgsyDksIRIf~~~~~~SRdiYhtkRM---q~V~  319 (433)
T KOG0268|consen  248 NEDHNLYTYDMRNLSR--PLNVHKDHVSAVMDVDFSPTGQE---FVSGSYDKSIRIFPVNHGHSRDIYHTKRM---QHVF  319 (433)
T ss_pred             cccccceehhhhhhcc--cchhhcccceeEEEeccCCCcch---hccccccceEEEeecCCCcchhhhhHhhh---heee
Confidence            4577788899887665  333322 3445666899999999   89999999999999987754333332332   6899


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.||.|.++++|||.|+.|++|.
T Consensus       320 ~Vk~S~Dskyi~SGSdd~nvRlWk  343 (433)
T KOG0268|consen  320 CVKYSMDSKYIISGSDDGNVRLWK  343 (433)
T ss_pred             EEEEeccccEEEecCCCcceeeee
Confidence            999999999999999999999994

>KOG2110|consensus

Probab=99.39  E-value=9.2e-12  Score=75.52  Aligned_cols=96  Identities=16%  Similarity=0.262  Sum_probs=79.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCccchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|.|++||+.+.+....+.  .|.+...++.|++.+..   ++|+++.|+ ||++++.+|+.+.+++--..  ...|.
T Consensus       150 ~t~GdV~l~d~~nl~~v~~I~--aH~~~lAalafs~~G~l---lATASeKGTVIRVf~v~~G~kl~eFRRG~~--~~~Iy  222 (391)
T KOG2110|consen  150 TTSGDVVLFDTINLQPVNTIN--AHKGPLAALAFSPDGTL---LATASEKGTVIRVFSVPEGQKLYEFRRGTY--PVSIY  222 (391)
T ss_pred             CCCceEEEEEcccceeeeEEE--ecCCceeEEEECCCCCE---EEEeccCceEEEEEEcCCccEeeeeeCCce--eeEEE
Confidence            357899999999998855554  46666777899999988   999999998 57999999999888853221  26788


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|+..+|++.+..++|++|.
T Consensus       223 SL~Fs~ds~~L~~sS~TeTVHiFK  246 (391)
T KOG2110|consen  223 SLSFSPDSQFLAASSNTETVHIFK  246 (391)
T ss_pred             EEEECCCCCeEEEecCCCeEEEEE
Confidence            999999999999999999999873

>KOG0300|consensus

Probab=99.38  E-value=2.4e-12  Score=77.36  Aligned_cols=93  Identities=19%  Similarity=0.344  Sum_probs=77.4

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~   82 (106)
                      +=|.+-.+||+.+++.+..+..+  .....-|..+|....   +++.+.|.+.++||.+.. +.+..+++|.    +.|+
T Consensus       291 SWDRTAnlwDVEtge~v~~LtGH--d~ELtHcstHptQrL---VvTsSrDtTFRLWDFReaI~sV~VFQGHt----dtVT  361 (481)
T KOG0300|consen  291 SWDRTANLWDVETGEVVNILTGH--DSELTHCSTHPTQRL---VVTSSRDTTFRLWDFREAIQSVAVFQGHT----DTVT  361 (481)
T ss_pred             eccccceeeeeccCceeccccCc--chhccccccCCcceE---EEEeccCceeEeccchhhcceeeeecccc----ccee
Confidence            34778899999999997777763  445666888887777   899999999999999854 4567889998    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.|..+ ..+++|+.|.+|++||
T Consensus       362 S~vF~~d-d~vVSgSDDrTvKvWd  384 (481)
T KOG0300|consen  362 SVVFNTD-DRVVSGSDDRTVKVWD  384 (481)
T ss_pred             EEEEecC-CceeecCCCceEEEee
Confidence            9999875 4588999999999997

>KOG1332|consensus

Probab=99.38  E-value=7.7e-12  Score=72.58  Aligned_cols=99  Identities=16%  Similarity=0.160  Sum_probs=71.8

Q ss_pred             CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCC
Q psy17135          2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFD   78 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~   78 (106)
                      |+..|++|+|++.+.... .....+..|...+-.+.|-. ..++.+|++++.||.|-||...+++  .......|.    
T Consensus        28 TcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wah-Pk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~----  102 (299)
T KOG1332|consen   28 TCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAH-PKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHS----  102 (299)
T ss_pred             eecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecc-cccCcEeeEeecCceEEEEecCCCchhhhhhhhhhc----
Confidence            678999999999987554 22233333444444466633 3334448999999999999998884  345566677    


Q ss_pred             CCeEEEEEcC--CCCEEEEecCCCeEEEc
Q psy17135         79 ESILDVAFHP--SKPFIASAGADGLAKVF  105 (106)
Q Consensus        79 ~~v~~~~~~~--~~~~~~s~~~d~~i~iw  105 (106)
                      ..|++++|-|  .+..|+.++.||.|.+.
T Consensus       103 ~SVNsV~wapheygl~LacasSDG~vsvl  131 (299)
T KOG1332|consen  103 ASVNSVAWAPHEYGLLLACASSDGKVSVL  131 (299)
T ss_pred             ccceeecccccccceEEEEeeCCCcEEEE
Confidence            8999999988  45578999999999875

>KOG0288|consensus

Probab=99.37  E-value=6.9e-12  Score=77.03  Aligned_cols=97  Identities=14%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      -.|++|++||.++..+....+.   .+.+.++..++.+..   +.+++.|.++.+.|+++......+.+..-+-....+.
T Consensus       319 H~DkkvRfwD~Rs~~~~~sv~~---gg~vtSl~ls~~g~~---lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtr  392 (459)
T KOG0288|consen  319 HFDKKVRFWDIRSADKTRSVPL---GGRVTSLDLSMDGLE---LLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTR  392 (459)
T ss_pred             ccccceEEEeccCCceeeEeec---CcceeeEeeccCCeE---EeeecCCCceeeeecccccEEEEeeccccccccccce
Confidence            4588999999999888555544   235666766676666   7888999999999999887666665432111145778


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|||++.++++||.||.++||+
T Consensus       393 vvfSpd~~YvaAGS~dgsv~iW~  415 (459)
T KOG0288|consen  393 VVFSPDGSYVAAGSADGSVYIWS  415 (459)
T ss_pred             eEECCCCceeeeccCCCcEEEEE
Confidence            89999999999999999999995

>KOG2096|consensus

Probab=99.37  E-value=5.3e-12  Score=75.72  Aligned_cols=96  Identities=19%  Similarity=0.273  Sum_probs=75.4

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---c-----cchheecc
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---K-----TCVQEITA   72 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~-----~~~~~~~~   72 (106)
                      |+...|.+|.+|+++ |+.+......  +..-..+..+|.+..   +++++..--|++|.+--   |     ....++.+
T Consensus       203 msas~dt~i~lw~lk-Gq~L~~idtn--q~~n~~aavSP~GRF---ia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG  276 (420)
T KOG2096|consen  203 MSASLDTKICLWDLK-GQLLQSIDTN--QSSNYDAAVSPDGRF---IAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG  276 (420)
T ss_pred             EEecCCCcEEEEecC-Cceeeeeccc--cccccceeeCCCCcE---EEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence            678899999999999 7765555442  222344666777776   88899889999998542   2     22456778


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.    ..|..++|+++...+++.+.||+.++||
T Consensus       277 H~----saV~~~aFsn~S~r~vtvSkDG~wriwd  306 (420)
T KOG2096|consen  277 HQ----SAVLAAAFSNSSTRAVTVSKDGKWRIWD  306 (420)
T ss_pred             ch----hheeeeeeCCCcceeEEEecCCcEEEee
Confidence            88    8999999999999999999999999997

>KOG1407|consensus

Probab=99.37  E-value=5.2e-12  Score=73.83  Aligned_cols=91  Identities=16%  Similarity=0.225  Sum_probs=77.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..|+|.|......++  ......|...-.++.|.|.+.+   +++|+.|-.+.+||++.--|++.+..+.    -.|..+
T Consensus       167 GlG~v~ILsypsLkp--v~si~AH~snCicI~f~p~Gry---fA~GsADAlvSLWD~~ELiC~R~isRld----wpVRTl  237 (313)
T KOG1407|consen  167 GLGCVEILSYPSLKP--VQSIKAHPSNCICIEFDPDGRY---FATGSADALVSLWDVDELICERCISRLD----WPVRTL  237 (313)
T ss_pred             CCceEEEEecccccc--ccccccCCcceEEEEECCCCce---EeeccccceeeccChhHhhhheeecccc----CceEEE
Confidence            457788888777776  4444556777788999999998   9999999999999999888999998887    899999


Q ss_pred             EEcCCCCEEEEecCCCeEEE
Q psy17135         85 AFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~i  104 (106)
                      +||.+|++||+++.|..|-|
T Consensus       238 SFS~dg~~lASaSEDh~IDI  257 (313)
T KOG1407|consen  238 SFSHDGRMLASASEDHFIDI  257 (313)
T ss_pred             EeccCcceeeccCccceEEe
Confidence            99999999999999987743

>KOG0301|consensus

Probab=99.37  E-value=7.6e-12  Score=80.85  Aligned_cols=91  Identities=24%  Similarity=0.349  Sum_probs=70.6

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      .+.+||.|+.|++ +++++.....  |+..+.++...+.+..   ++++++|+++++|+..  .+.+.+.-+.    -.+
T Consensus       195 ScsNDg~Ir~w~~-~ge~l~~~~g--htn~vYsis~~~~~~~---Ivs~gEDrtlriW~~~--e~~q~I~lPt----tsi  262 (745)
T KOG0301|consen  195 SCSNDGSIRLWDL-DGEVLLEMHG--HTNFVYSISMALSDGL---IVSTGEDRTLRIWKKD--ECVQVITLPT----TSI  262 (745)
T ss_pred             eecCCceEEEEec-cCceeeeeec--cceEEEEEEecCCCCe---EEEecCCceEEEeecC--ceEEEEecCc----cce
Confidence            5789999999999 6777555554  4555666665666666   8999999999999876  5666666444    689


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +++.+-+++. +++|+.||.||+|
T Consensus       263 Wsa~~L~NgD-Ivvg~SDG~VrVf  285 (745)
T KOG0301|consen  263 WSAKVLLNGD-IVVGGSDGRVRVF  285 (745)
T ss_pred             EEEEEeeCCC-EEEeccCceEEEE
Confidence            9999887776 6677789999998

>KOG0293|consensus

Probab=99.36  E-value=6.7e-12  Score=77.35  Aligned_cols=98  Identities=13%  Similarity=0.139  Sum_probs=78.1

Q ss_pred             cCCCceEEEEeCccCceee-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYA-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|.+..||++.....+. ...+..|...+..+.|+|++.+   +++|+.+..+.+||+.+|.+...+....   ...+
T Consensus       242 aSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdry---LlaCg~~e~~~lwDv~tgd~~~~y~~~~---~~S~  315 (519)
T KOG0293|consen  242 ASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRY---LLACGFDEVLSLWDVDTGDLRHLYPSGL---GFSV  315 (519)
T ss_pred             ccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCe---EEecCchHheeeccCCcchhhhhcccCc---CCCc
Confidence            4678899999987655422 2233334555667999999999   8999999999999999998777665432   1788


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+|.||+..+++|+.|+++..||
T Consensus       316 ~sc~W~pDg~~~V~Gs~dr~i~~wd  340 (519)
T KOG0293|consen  316 SSCAWCPDGFRFVTGSPDRTIIMWD  340 (519)
T ss_pred             ceeEEccCCceeEecCCCCcEEEec
Confidence            9999999999999999999999996

>KOG0646|consensus

Probab=99.36  E-value=1.3e-11  Score=76.67  Aligned_cols=97  Identities=16%  Similarity=0.136  Sum_probs=76.0

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc----------------
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT----------------   65 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~----------------   65 (106)
                      +.+.|.++++||+..+..+..+..+   ....++...|....   +..|+++|.|.+.++.+-.                
T Consensus       193 TaS~D~t~k~wdlS~g~LLlti~fp---~si~av~lDpae~~---~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t  266 (476)
T KOG0646|consen  193 TASEDRTIKLWDLSLGVLLLTITFP---SSIKAVALDPAERV---VYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENT  266 (476)
T ss_pred             EecCCceEEEEEeccceeeEEEecC---CcceeEEEcccccE---EEecCCcceEEeeehhcCCcccccccccccccccc
Confidence            4567999999999999998877773   44666777777766   7899999999988765432                


Q ss_pred             chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ....+.+|..  +..|+|++++-|+..|++|+.||.+.+||
T Consensus       267 ~~~~~~Gh~~--~~~ITcLais~DgtlLlSGd~dg~VcvWd  305 (476)
T KOG0646|consen  267 QINVLVGHEN--ESAITCLAISTDGTLLLSGDEDGKVCVWD  305 (476)
T ss_pred             eeeeeccccC--CcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence            1223445551  14999999999999999999999999997

>KOG0290|consensus

Probab=99.35  E-value=1.3e-11  Score=73.25  Aligned_cols=103  Identities=18%  Similarity=0.224  Sum_probs=73.9

Q ss_pred             CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec---c-----
Q psy17135          2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---A-----   72 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~-----   72 (106)
                      +++=|.+..|||+.++.. ..+..+-.|...+..+.|...+...  +++.+.||.||+||++.-.-...+.   .     
T Consensus       168 tSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~--FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pL  245 (364)
T KOG0290|consen  168 TSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDV--FASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPL  245 (364)
T ss_pred             eecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccce--EEEecCCCcEEEEEecccccceEEecCCCCCCcc
Confidence            356689999999998732 1233444567778889998854443  6999999999999988532111000   0     


Q ss_pred             ------------------------------------ccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         73 ------------------------------------HRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ------------------------------------~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                                                          .-.+|++.|+.++|.| ....+++|+.|..+.+||
T Consensus       246 lRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWD  316 (364)
T KOG0290|consen  246 LRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWD  316 (364)
T ss_pred             eeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEe
Confidence                                                0013668999999999 667899999999999997

>KOG1539|consensus

Probab=99.35  E-value=6.7e-12  Score=82.49  Aligned_cols=92  Identities=14%  Similarity=0.198  Sum_probs=78.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|-.|+++|..+.+.++.+..  |...+....|+|++..   +++++.|++|++||+.++.++-.+...     ..+..
T Consensus       553 ~ddf~I~vvD~~t~kvvR~f~g--h~nritd~~FS~DgrW---lisasmD~tIr~wDlpt~~lID~~~vd-----~~~~s  622 (910)
T KOG1539|consen  553 LDDFSIRVVDVVTRKVVREFWG--HGNRITDMTFSPDGRW---LISASMDSTIRTWDLPTGTLIDGLLVD-----SPCTS  622 (910)
T ss_pred             cCceeEEEEEchhhhhhHHhhc--cccceeeeEeCCCCcE---EEEeecCCcEEEEeccCcceeeeEecC-----Cccee
Confidence            3567899999998887555554  5667888999999998   899999999999999999988877644     57899


Q ss_pred             EEEcCCCCEEEEecCC-CeEEEc
Q psy17135         84 VAFHPSKPFIASAGAD-GLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d-~~i~iw  105 (106)
                      +.|+|++.+||+...| ..|++|
T Consensus       623 ls~SPngD~LAT~Hvd~~gIylW  645 (910)
T KOG1539|consen  623 LSFSPNGDFLATVHVDQNGIYLW  645 (910)
T ss_pred             eEECCCCCEEEEEEecCceEEEE
Confidence            9999999999999998 678888

>KOG0639|consensus

Probab=99.34  E-value=3.1e-12  Score=80.61  Aligned_cols=93  Identities=14%  Similarity=0.222  Sum_probs=78.3

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      .+-.||.|.|||+.++..+..+..  |.+++.++..++++..   |-||+-|.+||.||++.+..+.+..-.     ..|
T Consensus       526 sccsdGnI~vwDLhnq~~VrqfqG--htDGascIdis~dGtk---lWTGGlDntvRcWDlregrqlqqhdF~-----SQI  595 (705)
T KOG0639|consen  526 SCCSDGNIAVWDLHNQTLVRQFQG--HTDGASCIDISKDGTK---LWTGGLDNTVRCWDLREGRQLQQHDFS-----SQI  595 (705)
T ss_pred             eeccCCcEEEEEcccceeeecccC--CCCCceeEEecCCCce---eecCCCccceeehhhhhhhhhhhhhhh-----hhh
Confidence            356799999999999998666655  5777888888888888   899999999999999998877666533     689


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEE
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      +++.++|.+.+++.|-.++.+.+
T Consensus       596 fSLg~cP~~dWlavGMens~vev  618 (705)
T KOG0639|consen  596 FSLGYCPTGDWLAVGMENSNVEV  618 (705)
T ss_pred             eecccCCCccceeeecccCcEEE
Confidence            99999999999999998887654

>KOG2445|consensus

Probab=99.34  E-value=2e-11  Score=72.83  Aligned_cols=100  Identities=16%  Similarity=0.228  Sum_probs=70.7

Q ss_pred             CcCCCceEEEEeCccCce--eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---------chhee
Q psy17135          2 QKVPSSVIYIWTLLELQT--YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---------CVQEI   70 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---------~~~~~   70 (106)
                      ++..|++|+|||.+...-  ...-....|.+.+..+.|-+ .+++.++++++.|+++.||.-....         ...++
T Consensus        30 tCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAh-PEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl  108 (361)
T KOG2445|consen   30 TCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAH-PEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTL  108 (361)
T ss_pred             eccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecC-ccccceEEEEecCCceeeeeecccccccccceeEEEEEe
Confidence            678999999999754332  11233344566666677755 4455668999999999999763211         12234


Q ss_pred             ccccccCCCCeEEEEEcC--CCCEEEEecCCCeEEEcC
Q psy17135         71 TAHRKKFDESILDVAFHP--SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        71 ~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~i~iwd  106 (106)
                      ....    ..|+.+.|.|  -|-.+++++.||.+|||+
T Consensus       109 ~Dsr----ssV~DV~FaP~hlGLklA~~~aDG~lRIYE  142 (361)
T KOG2445|consen  109 VDSR----SSVTDVKFAPKHLGLKLAAASADGILRIYE  142 (361)
T ss_pred             ecCC----cceeEEEecchhcceEEEEeccCcEEEEEe
Confidence            3444    7999999999  566799999999999985

>KOG1036|consensus

Probab=99.34  E-value=1.1e-11  Score=73.66  Aligned_cols=90  Identities=14%  Similarity=0.156  Sum_probs=72.0

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      =||++++||......  +.... +......|.|.+...    +++|+-||.|+.+|+.+++ ..++..|.    ..+.++
T Consensus        33 WDgslrlYdv~~~~l--~~~~~-~~~plL~c~F~d~~~----~~~G~~dg~vr~~Dln~~~-~~~igth~----~~i~ci  100 (323)
T KOG1036|consen   33 WDGSLRLYDVPANSL--KLKFK-HGAPLLDCAFADEST----IVTGGLDGQVRRYDLNTGN-EDQIGTHD----EGIRCI  100 (323)
T ss_pred             ccCcEEEEeccchhh--hhhee-cCCceeeeeccCCce----EEEeccCceEEEEEecCCc-ceeeccCC----CceEEE
Confidence            489999999998866  33332 233466688877444    5899999999999998876 34555677    899999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++....+++|+.|++|++||
T Consensus       101 ~~~~~~~~vIsgsWD~~ik~wD  122 (323)
T KOG1036|consen  101 EYSYEVGCVISGSWDKTIKFWD  122 (323)
T ss_pred             EeeccCCeEEEcccCccEEEEe
Confidence            9999888899999999999997

>KOG0321|consensus

Probab=99.32  E-value=9.8e-12  Score=79.85  Aligned_cols=103  Identities=19%  Similarity=0.225  Sum_probs=73.4

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--ch-----h---eec
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CV-----Q---EIT   71 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~-----~---~~~   71 (106)
                      +...|.++++||+++.++........|...+.+..|.|.....  |++|+.|+.+.|||++-..  .+     .   ...
T Consensus       117 sasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~v--F~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n  194 (720)
T KOG0321|consen  117 SASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAV--FCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHN  194 (720)
T ss_pred             EccCCceeeeeeeccceeecceeecccccccchhhhccCCCcc--eeeccCCCcEEEEEEeccchhhHHHHhhhhhcccc
Confidence            3568999999999998886664455567778888899988876  7999999999999987332  00     0   011


Q ss_pred             c---cc----------ccCCCCeEE---EEEcCCCCEEEEecC-CCeEEEcC
Q psy17135         72 A---HR----------KKFDESILD---VAFHPSKPFIASAGA-DGLAKVFV  106 (106)
Q Consensus        72 ~---~~----------~~~~~~v~~---~~~~~~~~~~~s~~~-d~~i~iwd  106 (106)
                      .   +.          ..+...+..   +.+..|...||+++. |+.|++||
T Consensus       195 ~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWD  246 (720)
T KOG0321|consen  195 TAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWD  246 (720)
T ss_pred             CCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEe
Confidence            1   00          001134444   566778889999887 99999998

>KOG0294|consensus

Probab=99.30  E-value=4.6e-11  Score=71.44  Aligned_cols=96  Identities=22%  Similarity=0.265  Sum_probs=71.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCc------------------------------------eEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNIS------------------------------------LFD   47 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~   47 (106)
                      ..|+.+++||+-+|+.-......  + ....+.|.|.+...                                    ..+
T Consensus       146 g~D~~lr~WNLV~Gr~a~v~~L~--~-~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L  222 (362)
T KOG0294|consen  146 GGDQVLRTWNLVRGRVAFVLNLK--N-KATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSEL  222 (362)
T ss_pred             cCCceeeeehhhcCccceeeccC--C-cceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceE
Confidence            57899999999887763332221  1 22335555544421                                    114


Q ss_pred             EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE--cCCCCEEEEecCCCeEEEcC
Q psy17135         48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF--HPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|..|+.+++||.+...++..+.+|+    .+|-.+.+  .|++.+|++++.||.|++||
T Consensus       223 ~vG~d~~~i~~~D~ds~~~~~~~~AH~----~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd  279 (362)
T KOG0294|consen  223 LVGGDNEWISLKDTDSDTPLTEFLAHE----NRVKDIASYTNPEHEYLVTASSDGFIKVWD  279 (362)
T ss_pred             EEecCCceEEEeccCCCccceeeecch----hheeeeEEEecCCceEEEEeccCceEEEEE
Confidence            788999999999999999999999999    88888874  56788999999999999997

>KOG1332|consensus

Probab=99.29  E-value=1.6e-11  Score=71.27  Aligned_cols=100  Identities=16%  Similarity=0.217  Sum_probs=79.3

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchheeccccccCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQEITAHRKKFD   78 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~   78 (106)
                      .++.||+|.||.-.+++.........|...++++.|-|.+ ++..|++++.||.|.+.+.++.   ...+...+|+    
T Consensus        75 ScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphe-ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~----  149 (299)
T KOG1332|consen   75 SCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHE-YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHE----  149 (299)
T ss_pred             EeecCceEEEEecCCCchhhhhhhhhhcccceeecccccc-cceEEEEeeCCCcEEEEEEcCCCCccchhhhhccc----
Confidence            3678999999999998665555555577778889888865 4455699999999999988764   2345567788    


Q ss_pred             CCeEEEEEcCC---C-----------CEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPS---K-----------PFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~---~-----------~~~~s~~~d~~i~iwd  106 (106)
                      .+|+++.|.|.   |           ..|+||+-|..|++|+
T Consensus       150 ~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~  191 (299)
T KOG1332|consen  150 IGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWK  191 (299)
T ss_pred             cccceeeecCcCCCccccccCcccccceeeccCCccceeeee
Confidence            89999999985   3           3499999999999995

>KOG1446|consensus

Probab=99.29  E-value=6.7e-11  Score=70.41  Aligned_cols=91  Identities=19%  Similarity=0.213  Sum_probs=75.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      -|.+|+..++.+.+.++-+.+  |...++.+..+|.+..   +++++.|++|++||++..+|...+....      -...
T Consensus        78 ~d~tIryLsl~dNkylRYF~G--H~~~V~sL~~sP~~d~---FlS~S~D~tvrLWDlR~~~cqg~l~~~~------~pi~  146 (311)
T KOG1446|consen   78 EDDTIRYLSLHDNKYLRYFPG--HKKRVNSLSVSPKDDT---FLSSSLDKTVRLWDLRVKKCQGLLNLSG------RPIA  146 (311)
T ss_pred             CCCceEEEEeecCceEEEcCC--CCceEEEEEecCCCCe---EEecccCCeEEeeEecCCCCceEEecCC------Ccce
Confidence            478999999999999888887  4556788999998877   8999999999999999877766664333      2456


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +|.|+|-++|.+.....|++||
T Consensus       147 AfDp~GLifA~~~~~~~IkLyD  168 (311)
T KOG1446|consen  147 AFDPEGLIFALANGSELIKLYD  168 (311)
T ss_pred             eECCCCcEEEEecCCCeEEEEE
Confidence            8999999999999888999986

>KOG1007|consensus

Probab=99.28  E-value=2.1e-11  Score=72.38  Aligned_cols=99  Identities=19%  Similarity=0.377  Sum_probs=71.4

Q ss_pred             CcCCCceEEEEeCccCceee-ecccCC---CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-ccccc
Q psy17135          2 QKVPSSVIYIWTLLELQTYA-RNDCPE---LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKK   76 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~   76 (106)
                      .++.|+.|.+|++.....+. ......   +.....+..|+|......  +....|+++..||+++-++...+. +|.  
T Consensus       139 asm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnq--v~tt~d~tl~~~D~RT~~~~~sI~dAHg--  214 (370)
T KOG1007|consen  139 ASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQ--VATTSDSTLQFWDLRTMKKNNSIEDAHG--  214 (370)
T ss_pred             EEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccce--EEEeCCCcEEEEEccchhhhcchhhhhc--
Confidence            45779999999998765521 111111   233456678999654442  344457899999999877766664 454  


Q ss_pred             CCCCeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                        ..|..+.|+|+..+ |++|+.|+.|++||
T Consensus       215 --q~vrdlDfNpnkq~~lvt~gDdgyvriWD  243 (370)
T KOG1007|consen  215 --QRVRDLDFNPNKQHILVTCGDDGYVRIWD  243 (370)
T ss_pred             --ceeeeccCCCCceEEEEEcCCCccEEEEe
Confidence              78999999997765 89999999999997

>KOG1274|consensus

Probab=99.27  E-value=6.1e-11  Score=78.67  Aligned_cols=99  Identities=14%  Similarity=0.176  Sum_probs=76.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCC-----CCCC-CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPE-----LNSE-PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~   76 (106)
                      ...||.|++||+.++.....+..-.     .... .....|+|.+..   ++....|+.|++++..+......+..... 
T Consensus       156 ss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~---la~~~~d~~Vkvy~r~~we~~f~Lr~~~~-  231 (933)
T KOG1274|consen  156 SSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGT---LAVPPVDNTVKVYSRKGWELQFKLRDKLS-  231 (933)
T ss_pred             EecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCe---EEeeccCCeEEEEccCCceeheeeccccc-
Confidence            3579999999999988755443322     1122 234899999888   78888899999999998877766654321 


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ...+.++.|+|+|.+||++.-||.|.+||
T Consensus       232 -ss~~~~~~wsPnG~YiAAs~~~g~I~vWn  260 (933)
T KOG1274|consen  232 -SSKFSDLQWSPNGKYIAASTLDGQILVWN  260 (933)
T ss_pred             -ccceEEEEEcCCCcEEeeeccCCcEEEEe
Confidence             14588999999999999999999999997

>KOG0299|consensus

Probab=99.27  E-value=2.8e-11  Score=75.16  Aligned_cols=95  Identities=13%  Similarity=0.230  Sum_probs=76.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|..|.|||..+.+++..+..  |...+..+.|-.....   +.+++.|+.+++|+++.-..+.++.+|+    +.|.
T Consensus       220 gg~d~~v~Iw~~~t~ehv~~~~g--hr~~V~~L~fr~gt~~---lys~s~Drsvkvw~~~~~s~vetlyGHq----d~v~  290 (479)
T KOG0299|consen  220 GGRDRHVQIWDCDTLEHVKVFKG--HRGAVSSLAFRKGTSE---LYSASADRSVKVWSIDQLSYVETLYGHQ----DGVL  290 (479)
T ss_pred             cCCCceEEEecCcccchhhcccc--cccceeeeeeecCccc---eeeeecCCceEEEehhHhHHHHHHhCCc----ccee
Confidence            45688899999999998666554  4555566666666666   7899999999999999888888999998    8888


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+....-++.+..|+.|+++++|+
T Consensus       291 ~IdaL~reR~vtVGgrDrT~rlwK  314 (479)
T KOG0299|consen  291 GIDALSRERCVTVGGRDRTVRLWK  314 (479)
T ss_pred             eechhcccceEEeccccceeEEEe
Confidence            887776677777777888888885

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.27  E-value=1.1e-10  Score=66.94  Aligned_cols=87  Identities=14%  Similarity=0.275  Sum_probs=63.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ++.|.+||++ ++.+..+.    ......+.|+|.+..   ++.++   ..|.+.+||.++.+.+.... |     ..+.
T Consensus        82 ~~~v~lyd~~-~~~i~~~~----~~~~n~i~wsP~G~~---l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-----~~~t  147 (194)
T PF08662_consen   82 PAKVTLYDVK-GKKIFSFG----TQPRNTISWSPDGRF---LVLAGFGNLNGDLEFWDVRKKKKISTFE-H-----SDAT  147 (194)
T ss_pred             CcccEEEcCc-ccEeEeec----CCCceEEEECCCCCE---EEEEEccCCCcEEEEEECCCCEEeeccc-c-----CcEE
Confidence            4589999997 55433332    234567999999998   55554   34779999999877776553 3     4578


Q ss_pred             EEEEcCCCCEEEEecC------CCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGA------DGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~------d~~i~iwd  106 (106)
                      .++|+|+|++++++..      |..++||+
T Consensus       148 ~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~  177 (194)
T PF08662_consen  148 DVEWSPDGRYLATATTSPRLRVDNGFKIWS  177 (194)
T ss_pred             EEEEcCCCCEEEEEEeccceeccccEEEEE
Confidence            9999999999988774      56777774

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.26  E-value=1.4e-11  Score=52.91  Aligned_cols=38  Identities=34%  Similarity=0.656  Sum_probs=35.2

Q ss_pred             cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         65 TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        65 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++..+.+|.    ..|.+++|+|++..+++++.|+.|++||
T Consensus         2 ~~~~~~~~h~----~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHS----SSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSS----SSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCC----CcEEEEEEecccccceeeCCCCEEEEEC
Confidence            5677888898    8999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1408|consensus

Probab=99.26  E-value=1.4e-11  Score=80.52  Aligned_cols=69  Identities=20%  Similarity=0.260  Sum_probs=60.0

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC---CCCEEEEecCCCeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP---SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.++..+|.++.   |++|..-|.++++++..-..+..+.+|+    ..|.|+.|+.   ...+|+++++|+-|+++|
T Consensus       461 G~R~~~vSp~gqh---LAsGDr~GnlrVy~Lq~l~~~~~~eAHe----sEilcLeyS~p~~~~kLLASasrdRlIHV~D  532 (1080)
T KOG1408|consen  461 GFRALAVSPDGQH---LASGDRGGNLRVYDLQELEYTCFMEAHE----SEILCLEYSFPVLTNKLLASASRDRLIHVYD  532 (1080)
T ss_pred             ceEEEEECCCcce---ecccCccCceEEEEehhhhhhhheeccc----ceeEEEeecCchhhhHhhhhccCCceEEEEe
Confidence            3556777888877   8999999999999999888888899999    8999999985   446799999999999987

>KOG0772|consensus

Probab=99.25  E-value=2.7e-11  Score=76.49  Aligned_cols=77  Identities=17%  Similarity=0.220  Sum_probs=59.1

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheecccc-ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHR-KKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      |.....+..|+|.....  ++|++.|+++++||+++.+. +..+.... ..-+-.+...+|++++..||+|+.||.|.+|
T Consensus       267 Hia~lt~g~whP~~k~~--FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W  344 (641)
T KOG0772|consen  267 HIAELTCGCWHPDNKEE--FLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW  344 (641)
T ss_pred             ceeeeeccccccCcccc--eEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence            55567778999998776  79999999999999987542 33332111 1112567788999999999999999999999


Q ss_pred             C
Q psy17135        106 V  106 (106)
Q Consensus       106 d  106 (106)
                      +
T Consensus       345 ~  345 (641)
T KOG0772|consen  345 D  345 (641)
T ss_pred             e
Confidence            6

>KOG0321|consensus

Probab=99.25  E-value=1.4e-11  Score=79.09  Aligned_cols=96  Identities=15%  Similarity=0.201  Sum_probs=74.9

Q ss_pred             CCCceEEEEeCccCcee--e-e-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--eccccccC
Q psy17135          4 VPSSVIYIWTLLELQTY--A-R-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE--ITAHRKKF   77 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~--~~~~~~~~   77 (106)
                      ..||.|.++|.+.....  . . .....|...+..+.|.|-...   |++++.|.++++||++++.+...  +.+|.   
T Consensus        71 dE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~---lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~---  144 (720)
T KOG0321|consen   71 DEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESL---LVSASGDSTIRPWDVKTSRLVGGRLNLGHT---  144 (720)
T ss_pred             cCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCcee---EEEccCCceeeeeeeccceeecceeecccc---
Confidence            35889999998764431  0 1 222335555667899994444   89999999999999999887766  78888   


Q ss_pred             CCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                       ..+-+++|+| +...|++|++||.+.|||
T Consensus       145 -~SvkS~cf~~~n~~vF~tGgRDg~illWD  173 (720)
T KOG0321|consen  145 -GSVKSECFMPTNPAVFCTGGRDGEILLWD  173 (720)
T ss_pred             -cccchhhhccCCCcceeeccCCCcEEEEE
Confidence             8999999999 556799999999999997

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.24  E-value=2.5e-10  Score=68.44  Aligned_cols=94  Identities=12%  Similarity=0.124  Sum_probs=70.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|++||+.+++.+..+..   ......+.|.|.+...  +++++.++.+++||..+++.+..+..+.     .+.
T Consensus         7 ~~~d~~v~~~d~~t~~~~~~~~~---~~~~~~l~~~~dg~~l--~~~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~   76 (300)
T TIGR03866         7 NEKDNTISVIDTATLEVTRTFPV---GQRPRGITLSKDGKLL--YVCASDSDTIQVIDLATGEVIGTLPSGP-----DPE   76 (300)
T ss_pred             ecCCCEEEEEECCCCceEEEEEC---CCCCCceEECCCCCEE--EEEECCCCeEEEEECCCCcEEEeccCCC-----Ccc
Confidence            45789999999999887665543   2234568888887652  4677888999999999888766665443     356


Q ss_pred             EEEEcCCCCEEE-EecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIA-SAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~-s~~~d~~i~iwd  106 (106)
                      .+.++|++..++ +++.++.+++||
T Consensus        77 ~~~~~~~g~~l~~~~~~~~~l~~~d  101 (300)
T TIGR03866        77 LFALHPNGKILYIANEDDNLVTVID  101 (300)
T ss_pred             EEEECCCCCEEEEEcCCCCeEEEEE
Confidence            788999998764 556688999986

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1036|consensus

Probab=99.24  E-value=1.7e-10  Score=68.65  Aligned_cols=90  Identities=9%  Similarity=0.059  Sum_probs=70.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .-||.|+.+|+.++..   .....|...+.++.+.+....   +++|+.|++|++||.++..+...+...     ..|.+
T Consensus        72 ~~dg~vr~~Dln~~~~---~~igth~~~i~ci~~~~~~~~---vIsgsWD~~ik~wD~R~~~~~~~~d~~-----kkVy~  140 (323)
T KOG1036|consen   72 GLDGQVRRYDLNTGNE---DQIGTHDEGIRCIEYSYEVGC---VISGSWDKTIKFWDPRNKVVVGTFDQG-----KKVYC  140 (323)
T ss_pred             ccCceEEEEEecCCcc---eeeccCCCceEEEEeeccCCe---EEEcccCccEEEEeccccccccccccC-----ceEEE
Confidence            4589999999999885   333345666777888877777   899999999999999985555444432     47787


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +..+  +..|+.|+.++.+.+||
T Consensus       141 ~~v~--g~~LvVg~~~r~v~iyD  161 (323)
T KOG1036|consen  141 MDVS--GNRLVVGTSDRKVLIYD  161 (323)
T ss_pred             Eecc--CCEEEEeecCceEEEEE
Confidence            7664  67899999999999997

>KOG0278|consensus

Probab=99.23  E-value=8e-11  Score=68.80  Aligned_cols=67  Identities=15%  Similarity=0.251  Sum_probs=47.8

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.++..++.+..    ++....+.|+.||.++-..++.+..+     ..|.+.+++|+...++.|+.|..++-||
T Consensus       186 ~VtSlEvs~dG~i----lTia~gssV~Fwdaksf~~lKs~k~P-----~nV~SASL~P~k~~fVaGged~~~~kfD  252 (334)
T KOG0278|consen  186 PVTSLEVSQDGRI----LTIAYGSSVKFWDAKSFGLLKSYKMP-----CNVESASLHPKKEFFVAGGEDFKVYKFD  252 (334)
T ss_pred             CCcceeeccCCCE----EEEecCceeEEeccccccceeeccCc-----cccccccccCCCceEEecCcceEEEEEe
Confidence            3444555554443    55566677888888776666666544     4788888999998999999999988776

>KOG4378|consensus

Probab=99.22  E-value=1.3e-10  Score=73.36  Aligned_cols=95  Identities=12%  Similarity=0.220  Sum_probs=77.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..+|.|.+||+....+...+... |......+.|+|..+..  +++.+.|..|.+||....+....+...     .....
T Consensus       184 sd~G~VtlwDv~g~sp~~~~~~~-HsAP~~gicfspsne~l--~vsVG~Dkki~~yD~~s~~s~~~l~y~-----~Plst  255 (673)
T KOG4378|consen  184 SDKGAVTLWDVQGMSPIFHASEA-HSAPCRGICFSPSNEAL--LVSVGYDKKINIYDIRSQASTDRLTYS-----HPLST  255 (673)
T ss_pred             ccCCeEEEEeccCCCcccchhhh-ccCCcCcceecCCccce--EEEecccceEEEeecccccccceeeec-----CCcce
Confidence            57899999999988875555443 33445558899988886  899999999999999877666666533     47789


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+++|.+|+.|...|.+..||
T Consensus       256 vaf~~~G~~L~aG~s~G~~i~YD  278 (673)
T KOG4378|consen  256 VAFSECGTYLCAGNSKGELIAYD  278 (673)
T ss_pred             eeecCCceEEEeecCCceEEEEe
Confidence            99999999999999999998886

>KOG0642|consensus

Probab=99.22  E-value=4.6e-11  Score=75.72  Aligned_cols=98  Identities=15%  Similarity=0.231  Sum_probs=71.3

Q ss_pred             CcCCCceEEEEeCcc------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----------c
Q psy17135          2 QKVPSSVIYIWTLLE------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----------T   65 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----------~   65 (106)
                      +..-||+|.+|+++.      ......+....|...+.++...+.+..   +.+|+-||+|+.|++...          .
T Consensus       311 t~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~---~ysgg~Dg~I~~w~~p~n~dp~ds~dp~v  387 (577)
T KOG0642|consen  311 TASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEH---CYSGGIDGTIRCWNLPPNQDPDDSYDPSV  387 (577)
T ss_pred             EeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceE---EEeeccCceeeeeccCCCCCcccccCcch
Confidence            456799999999932      111223344446655556666666666   789999999999965421          1


Q ss_pred             chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...++.+|.    +.++.+++|+....|++|+.||++++|+
T Consensus       388 l~~~l~Ght----davw~l~~s~~~~~Llscs~DgTvr~w~  424 (577)
T KOG0642|consen  388 LSGTLLGHT----DAVWLLALSSTKDRLLSCSSDGTVRLWE  424 (577)
T ss_pred             hccceeccc----cceeeeeecccccceeeecCCceEEeec
Confidence            234566777    8999999999888899999999999995

>KOG0303|consensus

Probab=99.22  E-value=1.3e-10  Score=71.36  Aligned_cols=96  Identities=13%  Similarity=0.083  Sum_probs=74.3

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|++|.+||+.+++.+..+.   |.+-+.++.|+..+..   ++|.+.|+.|++||.++++.+..-.+|++   ..-
T Consensus       149 sag~Dn~v~iWnv~tgeali~l~---hpd~i~S~sfn~dGs~---l~TtckDKkvRv~dpr~~~~v~e~~~heG---~k~  219 (472)
T KOG0303|consen  149 SAGSDNTVSIWNVGTGEALITLD---HPDMVYSMSFNRDGSL---LCTTCKDKKVRVIDPRRGTVVSEGVAHEG---AKP  219 (472)
T ss_pred             hccCCceEEEEeccCCceeeecC---CCCeEEEEEeccCCce---eeeecccceeEEEcCCCCcEeeecccccC---CCc
Confidence            45689999999999999866554   5666778999999988   89999999999999999998887777773   344


Q ss_pred             EEEEEcCCCCEEEEec---CCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAG---ADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~---~d~~i~iwd  106 (106)
                      ..+-|-.++..+.+|.   .++.+-+||
T Consensus       220 ~Raifl~~g~i~tTGfsr~seRq~aLwd  247 (472)
T KOG0303|consen  220 ARAIFLASGKIFTTGFSRMSERQIALWD  247 (472)
T ss_pred             ceeEEeccCceeeeccccccccceeccC
Confidence            4455666777554443   556777776

>KOG0646|consensus

Probab=99.22  E-value=4.1e-11  Score=74.50  Aligned_cols=90  Identities=17%  Similarity=0.241  Sum_probs=70.4

Q ss_pred             ceEEEEeCccCceee-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          7 SVIYIWTLLELQTYA-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ..|.+|.+.....+. ....   ...+.++...|.+..   ++.|...+.+.+|.+.+|..+..+.+|-    ..|+++.
T Consensus        61 p~l~vw~i~k~~~~~q~~v~---Pg~v~al~s~n~G~~---l~ag~i~g~lYlWelssG~LL~v~~aHY----Q~ITcL~  130 (476)
T KOG0646|consen   61 PLLHVWEILKKDQVVQYIVL---PGPVHALASSNLGYF---LLAGTISGNLYLWELSSGILLNVLSAHY----QSITCLK  130 (476)
T ss_pred             ccccccccCchhhhhhhccc---ccceeeeecCCCceE---EEeecccCcEEEEEeccccHHHHHHhhc----cceeEEE
Confidence            467888887655533 2222   223344444454444   7778799999999999999999999998    8999999


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |+-|+.+++|||.||.|.+|+
T Consensus       131 fs~dgs~iiTgskDg~V~vW~  151 (476)
T KOG0646|consen  131 FSDDGSHIITGSKDGAVLVWL  151 (476)
T ss_pred             EeCCCcEEEecCCCccEEEEE
Confidence            999999999999999999994

>KOG0299|consensus

Probab=99.21  E-value=1.4e-10  Score=72.07  Aligned_cols=97  Identities=21%  Similarity=0.277  Sum_probs=78.3

Q ss_pred             cCCCceEEEEeCccCcee----ee----------cccC--CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135          3 KVPSSVIYIWTLLELQTY----AR----------NDCP--ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC   66 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~----~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~   66 (106)
                      ...|++|.=|++.+++..    .+          ....  .|.....+++.++++.+   +++|+.|..+.||+.++...
T Consensus       160 ask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky---latgg~d~~v~Iw~~~t~eh  236 (479)
T KOG0299|consen  160 ASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY---LATGGRDRHVQIWDCDTLEH  236 (479)
T ss_pred             cCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE---EEecCCCceEEEecCcccch
Confidence            467889999999887742    01          0111  23445566777777777   99999999999999999999


Q ss_pred             hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         67 VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.+.+|.    +.|.+++|......+.+++.|+.+++|+
T Consensus       237 v~~~~ghr----~~V~~L~fr~gt~~lys~s~Drsvkvw~  272 (479)
T KOG0299|consen  237 VKVFKGHR----GAVSSLAFRKGTSELYSASADRSVKVWS  272 (479)
T ss_pred             hhcccccc----cceeeeeeecCccceeeeecCCceEEEe
Confidence            99999999    8999999998878899999999999995

>KOG0973|consensus

Probab=99.21  E-value=8e-11  Score=78.90  Aligned_cols=96  Identities=16%  Similarity=0.308  Sum_probs=72.7

Q ss_pred             CCCceEEEEeCccCc----e----eeec--ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-------c--
Q psy17135          4 VPSSVIYIWTLLELQ----T----YARN--DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-------K--   64 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~----~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-------~--   64 (106)
                      +.|+.++||+...--    .    +.+.  ....|.+.+.++.|.|++.+   |++|+.|+.|.+|+...       |  
T Consensus        34 ~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~---lAsGSDD~~v~iW~~~~~~~~~~fgs~  110 (942)
T KOG0973|consen   34 VLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSY---LASGSDDRLVMIWERAEIGSGTVFGST  110 (942)
T ss_pred             cccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCe---EeeccCcceEEEeeecccCCccccccc
Confidence            368888899985311    0    1122  12225566777889999999   99999999999998773       0  


Q ss_pred             ---------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         65 ---------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        65 ---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                               ++...+.+|.    ..|..+.|+|++.++++++-|++|.+|+
T Consensus       111 g~~~~vE~wk~~~~l~~H~----~DV~Dv~Wsp~~~~lvS~s~DnsViiwn  157 (942)
T KOG0973|consen  111 GGAKNVESWKVVSILRGHD----SDVLDVNWSPDDSLLVSVSLDNSVIIWN  157 (942)
T ss_pred             ccccccceeeEEEEEecCC----CccceeccCCCccEEEEecccceEEEEc
Confidence                     1344566676    8999999999999999999999999996

>KOG2110|consensus

Probab=99.21  E-value=3.4e-10  Score=68.89  Aligned_cols=94  Identities=21%  Similarity=0.385  Sum_probs=70.2

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEE-EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFD-SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      +.|.|||+++.+.++....-..+ ....+++++......+. -.....|.|.+||..+-+....+.+|.    +.+-+++
T Consensus       106 e~IyIydI~~MklLhTI~t~~~n-~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~----~~lAala  180 (391)
T KOG2110|consen  106 ESIYIYDIKDMKLLHTIETTPPN-PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHK----GPLAALA  180 (391)
T ss_pred             ccEEEEecccceeehhhhccCCC-ccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecC----CceeEEE
Confidence            35999999999997776653222 23345566655432111 223345889999999999999999999    8999999


Q ss_pred             EcCCCCEEEEecCCCeE-EEc
Q psy17135         86 FHPSKPFIASAGADGLA-KVF  105 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i-~iw  105 (106)
                      |+++|..+|+++..|+| |+|
T Consensus       181 fs~~G~llATASeKGTVIRVf  201 (391)
T KOG2110|consen  181 FSPDGTLLATASEKGTVIRVF  201 (391)
T ss_pred             ECCCCCEEEEeccCceEEEEE
Confidence            99999999999999984 444

>KOG0307|consensus

Probab=99.20  E-value=5.1e-11  Score=80.31  Aligned_cols=97  Identities=20%  Similarity=0.308  Sum_probs=74.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC---CcEEEeeCCCc-cchheeccccccCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD---CSIRLWNLDNK-TCVQEITAHRKKFDE   79 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d---~~v~iwd~~~~-~~~~~~~~~~~~~~~   79 (106)
                      .++|.+.|||++..+.+..+.-.-.......+.|+|......+  +++.|   -.|.+||++.. .+++.++.|.    .
T Consensus       181 s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~--~As~dd~~PviqlWDlR~assP~k~~~~H~----~  254 (1049)
T KOG0307|consen  181 SPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL--VASGDDSAPVIQLWDLRFASSPLKILEGHQ----R  254 (1049)
T ss_pred             CCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee--eecCCCCCceeEeecccccCCchhhhcccc----c
Confidence            4678999999998887555544222233456999999888744  44433   34889999974 5788888998    8


Q ss_pred             CeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      +|.++.|++.+ .+++|++.|++|..|+
T Consensus       255 GilslsWc~~D~~lllSsgkD~~ii~wN  282 (1049)
T KOG0307|consen  255 GILSLSWCPQDPRLLLSSGKDNRIICWN  282 (1049)
T ss_pred             ceeeeccCCCCchhhhcccCCCCeeEec
Confidence            99999999954 7899999999999995

>KOG0973|consensus

Probab=99.20  E-value=1.2e-10  Score=78.03  Aligned_cols=96  Identities=18%  Similarity=0.298  Sum_probs=79.5

Q ss_pred             CCCceEEEEeCccC----------ce-----e-eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch
Q psy17135          4 VPSSVIYIWTLLEL----------QT-----Y-ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV   67 (106)
Q Consensus         4 ~~d~~i~iwd~~~~----------~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~   67 (106)
                      ..|..|.||+....          ..     . .......|...+..+.|.|.+..   +++++.|++|-+|+..+...+
T Consensus        88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~---lvS~s~DnsViiwn~~tF~~~  164 (942)
T KOG0973|consen   88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL---LVSVSLDNSVIIWNAKTFELL  164 (942)
T ss_pred             cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE---EEEecccceEEEEccccceee
Confidence            56888999998730          00     0 01112226677888999998888   899999999999999999999


Q ss_pred             heeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         68 QEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        68 ~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+.+|.    ..|-.+.|.|-|+++|+-+.|+++++|+
T Consensus       165 ~vl~~H~----s~VKGvs~DP~Gky~ASqsdDrtikvwr  199 (942)
T KOG0973|consen  165 KVLRGHQ----SLVKGVSWDPIGKYFASQSDDRTLKVWR  199 (942)
T ss_pred             eeeeccc----ccccceEECCccCeeeeecCCceEEEEE
Confidence            9999999    8999999999999999999999999995

>KOG2394|consensus

Probab=99.18  E-value=1.3e-10  Score=73.75  Aligned_cols=71  Identities=17%  Similarity=0.322  Sum_probs=62.5

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...+....|+|++..   |++.+.||.+||||..+-..+..+...-    +...|+.||||+++|++|++|.-|.+|.
T Consensus       290 ~g~in~f~FS~DG~~---LA~VSqDGfLRvF~fdt~eLlg~mkSYF----GGLLCvcWSPDGKyIvtGGEDDLVtVwS  360 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKY---LATVSQDGFLRIFDFDTQELLGVMKSYF----GGLLCVCWSPDGKYIVTGGEDDLVTVWS  360 (636)
T ss_pred             cccccceeEcCCCce---EEEEecCceEEEeeccHHHHHHHHHhhc----cceEEEEEcCCccEEEecCCcceEEEEE
Confidence            345666788887777   9999999999999999888877777777    8999999999999999999999999984

>KOG1009|consensus

Probab=99.17  E-value=1.2e-10  Score=71.48  Aligned_cols=98  Identities=16%  Similarity=0.305  Sum_probs=75.0

Q ss_pred             CcCCCceEEEEeCccCce-------eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----------
Q psy17135          2 QKVPSSVIYIWTLLELQT-------YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----------   64 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----------   64 (106)
                      +...|..|+||-+.....       ...-.+..|+..++.+.|+|.+..   +++|+.+|.+.+|-...-          
T Consensus        31 T~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gel---LASg~D~g~v~lWk~~~~~~~~~d~e~~  107 (434)
T KOG1009|consen   31 TAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGEL---LASGGDGGEVFLWKQGDVRIFDADTEAD  107 (434)
T ss_pred             cccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCe---eeecCCCceEEEEEecCcCCccccchhh
Confidence            356789999999875333       112233346667888999999998   899999999999976511          


Q ss_pred             ------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         65 ------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        65 ------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                            ...+.+.+|.    ..+..++|+|++..+++++-|..+++||
T Consensus       108 ~~ke~w~v~k~lr~h~----~diydL~Ws~d~~~l~s~s~dns~~l~D  151 (434)
T KOG1009|consen  108 LNKEKWVVKKVLRGHR----DDIYDLAWSPDSNFLVSGSVDNSVRLWD  151 (434)
T ss_pred             hCccceEEEEEecccc----cchhhhhccCCCceeeeeeccceEEEEE
Confidence                  1122344555    8999999999999999999999999997

>KOG0644|consensus

Probab=99.15  E-value=4.2e-11  Score=79.26  Aligned_cols=93  Identities=18%  Similarity=0.352  Sum_probs=75.0

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ++.++|..++||.+.+..++.....  |.+.+....... .+..  +++++.|..|++|-+..+.++..+.+|.    +.
T Consensus       206 itgsdd~lvKiwS~et~~~lAs~rG--hs~ditdlavs~-~n~~--iaaaS~D~vIrvWrl~~~~pvsvLrght----ga  276 (1113)
T KOG0644|consen  206 ITGSDDRLVKIWSMETARCLASCRG--HSGDITDLAVSS-NNTM--IAAASNDKVIRVWRLPDGAPVSVLRGHT----GA  276 (1113)
T ss_pred             eecCccceeeeeeccchhhhccCCC--Cccccchhccch-hhhh--hhhcccCceEEEEecCCCchHHHHhccc----cc
Confidence            3567899999999999998544444  455454444333 3333  7899999999999999999999999999    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |++++|+|-.    +.+.||++++||
T Consensus       277 vtaiafsP~~----sss~dgt~~~wd  298 (1113)
T KOG0644|consen  277 VTAIAFSPRA----SSSDDGTCRIWD  298 (1113)
T ss_pred             eeeeccCccc----cCCCCCceEecc
Confidence            9999999954    788999999997

>KOG0647|consensus

Probab=99.15  E-value=2.9e-10  Score=67.80  Aligned_cols=72  Identities=22%  Similarity=0.351  Sum_probs=57.6

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccch-heeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCV-QEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+..+.|+|.....  ++.++.|++||+|+++. |... +....|.    ..+.+++|+.+|..+++|+.|+.+++||
T Consensus        27 ~DsIS~l~FSP~~~~~--~~A~SWD~tVR~wevq~~g~~~~ka~~~~~----~PvL~v~WsddgskVf~g~~Dk~~k~wD  100 (347)
T KOG0647|consen   27 EDSISALAFSPQADNL--LAAGSWDGTVRIWEVQNSGQLVPKAQQSHD----GPVLDVCWSDDGSKVFSGGCDKQAKLWD  100 (347)
T ss_pred             ccchheeEeccccCce--EEecccCCceEEEEEecCCcccchhhhccC----CCeEEEEEccCCceEEeeccCCceEEEE
Confidence            3446679999954442  67999999999999987 3332 3334455    8999999999999999999999999997

>KOG1445|consensus

Probab=99.14  E-value=3e-10  Score=73.79  Aligned_cols=98  Identities=13%  Similarity=0.179  Sum_probs=77.0

Q ss_pred             CcCCCceEEEEeCccCceeee----cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135          2 QKVPSSVIYIWTLLELQTYAR----NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      +++.|..|+||.+..+-....    ....+.+..+-++.|+|....   +...+..|.+++||+.+++.+..+.+|.   
T Consensus        97 T~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDg---il~s~a~g~v~i~D~stqk~~~el~~h~---  170 (1012)
T KOG1445|consen   97 TCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADG---ILASGAHGSVYITDISTQKTAVELSGHT---  170 (1012)
T ss_pred             cccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCc---eEEeccCceEEEEEcccCceeecccCCc---
Confidence            578999999999984322111    112223334556788887766   5556667899999999999999999998   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       +.|.+..|+.||..+++++.|..|+|||
T Consensus       171 -d~vQSa~WseDG~llatscKdkqirifD  198 (1012)
T KOG1445|consen  171 -DKVQSADWSEDGKLLATSCKDKQIRIFD  198 (1012)
T ss_pred             -hhhhccccccCCceEeeecCCcceEEeC
Confidence             8999999999999999999999999997

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.13  E-value=2e-09  Score=64.57  Aligned_cols=96  Identities=7%  Similarity=0.111  Sum_probs=67.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCC-----CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPEL-----NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      ..++.|++||+.+++.+..+.....     ......+.++|.+...  +++...+..+.+||.++++....+. +.    
T Consensus       176 ~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~--~~~~~~~~~i~v~d~~~~~~~~~~~-~~----  248 (300)
T TIGR03866       176 EIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA--FVALGPANRVAVVDAKTYEVLDYLL-VG----  248 (300)
T ss_pred             CCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEE--EEEcCCCCeEEEEECCCCcEEEEEE-eC----
Confidence            3578999999999887555432210     1112346678877763  3444556679999998887665543 33    


Q ss_pred             CCeEEEEEcCCCCEEEEe-cCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASA-GADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~-~~d~~i~iwd  106 (106)
                      ..+.+++|+|++..++++ +.++.|.+||
T Consensus       249 ~~~~~~~~~~~g~~l~~~~~~~~~i~v~d  277 (300)
T TIGR03866       249 QRVWQLAFTPDEKYLLTTNGVSNDVSVID  277 (300)
T ss_pred             CCcceEEECCCCCEEEEEcCCCCeEEEEE
Confidence            568899999999998776 5689999997

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0649|consensus

Probab=99.13  E-value=3.2e-10  Score=66.12  Aligned_cols=97  Identities=22%  Similarity=0.188  Sum_probs=69.5

Q ss_pred             cCCCceEEEEeCccCce------eeecccCCCC-----CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135          3 KVPSSVIYIWTLLELQT------YARNDCPELN-----SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT   71 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~   71 (106)
                      +-.||.|+-|.-+....      +.....+.+.     ..++.+...|..+.   +..++-|+.+..||+++|+..+.+.
T Consensus        77 s~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enS---i~~AgGD~~~y~~dlE~G~i~r~~r  153 (325)
T KOG0649|consen   77 SGGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENS---ILFAGGDGVIYQVDLEDGRIQREYR  153 (325)
T ss_pred             eccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCc---EEEecCCeEEEEEEecCCEEEEEEc
Confidence            45678888887654222      1111111111     23445555566665   5666689999999999999999999


Q ss_pred             cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +|.    +.+.++........+.||+.||++|+||
T Consensus       154 GHt----DYvH~vv~R~~~~qilsG~EDGtvRvWd  184 (325)
T KOG0649|consen  154 GHT----DYVHSVVGRNANGQILSGAEDGTVRVWD  184 (325)
T ss_pred             CCc----ceeeeeeecccCcceeecCCCccEEEEe
Confidence            999    8999998866666799999999999997

>KOG2048|consensus

Probab=99.12  E-value=1.1e-09  Score=70.88  Aligned_cols=98  Identities=15%  Similarity=0.183  Sum_probs=74.7

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...-+|+|.-||+.++++.......  ...+-+++.+|.+..   ++.|+.||.+..++...++....-  .-+++++++
T Consensus        85 S~g~sg~i~EwDl~~lk~~~~~d~~--gg~IWsiai~p~~~~---l~IgcddGvl~~~s~~p~~I~~~r--~l~rq~sRv  157 (691)
T KOG2048|consen   85 SSGLSGSITEWDLHTLKQKYNIDSN--GGAIWSIAINPENTI---LAIGCDDGVLYDFSIGPDKITYKR--SLMRQKSRV  157 (691)
T ss_pred             eecCCceEEEEecccCceeEEecCC--CcceeEEEeCCccce---EEeecCCceEEEEecCCceEEEEe--ecccccceE
Confidence            4567899999999999986666652  223444667777766   788999998888888777643221  112223899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|++..+++|+.||.|++||
T Consensus       158 Lslsw~~~~~~i~~Gs~Dg~Iriwd  182 (691)
T KOG2048|consen  158 LSLSWNPTGTKIAGGSIDGVIRIWD  182 (691)
T ss_pred             EEEEecCCccEEEecccCceEEEEE
Confidence            9999999999999999999999997

>KOG0300|consensus

Probab=99.11  E-value=2.8e-10  Score=68.66  Aligned_cols=72  Identities=21%  Similarity=0.364  Sum_probs=60.1

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++-.+......+.   +.+++.|.+.+||.++++.|+.++.+|.    +.|++++|++.+.++++++.|++..||.
T Consensus       147 HkDGiW~Vaa~~tqpi---~gtASADhTA~iWs~Esg~CL~~Y~GH~----GSVNsikfh~s~~L~lTaSGD~taHIW~  218 (481)
T KOG0300|consen  147 HKDGIWHVAADSTQPI---CGTASADHTARIWSLESGACLATYTGHT----GSVNSIKFHNSGLLLLTASGDETAHIWK  218 (481)
T ss_pred             cccceeeehhhcCCcc---eeecccccceeEEeeccccceeeecccc----cceeeEEeccccceEEEccCCcchHHHH
Confidence            4444433433333333   7999999999999999999999999999    8999999999999999999999999983

>KOG4328|consensus

Probab=99.11  E-value=4.7e-10  Score=69.91  Aligned_cols=92  Identities=16%  Similarity=0.180  Sum_probs=69.4

Q ss_pred             ceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch----heeccccccCCCCe
Q psy17135          7 SVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV----QEITAHRKKFDESI   81 (106)
Q Consensus         7 ~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~----~~~~~~~~~~~~~v   81 (106)
                      |...+||++++.. ......  |...+..+.++|.....  ++|++-|++++|||++.-...    -....|.    ..|
T Consensus       301 G~f~~iD~R~~~s~~~~~~l--h~kKI~sv~~NP~~p~~--laT~s~D~T~kIWD~R~l~~K~sp~lst~~Hr----rsV  372 (498)
T KOG4328|consen  301 GNFNVIDLRTDGSEYENLRL--HKKKITSVALNPVCPWF--LATASLDQTAKIWDLRQLRGKASPFLSTLPHR----RSV  372 (498)
T ss_pred             cceEEEEeecCCccchhhhh--hhcccceeecCCCCchh--eeecccCcceeeeehhhhcCCCCcceeccccc----cee
Confidence            4567899987665 222222  34467889999988776  899999999999999863222    2223455    789


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.-|||++-.+++-+.|..|++||
T Consensus       373 ~sAyFSPs~gtl~TT~~D~~IRv~d  397 (498)
T KOG4328|consen  373 NSAYFSPSGGTLLTTCQDNEIRVFD  397 (498)
T ss_pred             eeeEEcCCCCceEeeccCCceEEee
Confidence            9999999777799999999999997

>KOG1063|consensus

Probab=99.10  E-value=2.9e-10  Score=73.85  Aligned_cols=92  Identities=17%  Similarity=0.269  Sum_probs=71.8

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc----chheeccccccCCCCe
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT----CVQEITAHRKKFDESI   81 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~~~~~v   81 (106)
                      -..|++|+..+-.....+..  |.-.+..+.|+|++.+   |++.+.|+++.+|......    .......|.    ..|
T Consensus       551 hAvI~lw~t~~W~~~~~L~~--HsLTVT~l~FSpdg~~---LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~Ht----RII  621 (764)
T KOG1063|consen  551 HAVIRLWNTANWLQVQELEG--HSLTVTRLAFSPDGRY---LLSVSRDRTVSLYEVQEDIKDEFRFACLKAHT----RII  621 (764)
T ss_pred             ceEEEEEeccchhhhheecc--cceEEEEEEECCCCcE---EEEeecCceEEeeeeecccchhhhhccccccc----eEE
Confidence            34689999987665443333  3434556999999998   8999999999999875432    233456676    789


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++..|+|++.+++++|+|.+|++|.
T Consensus       622 WdcsW~pde~~FaTaSRDK~VkVW~  646 (764)
T KOG1063|consen  622 WDCSWSPDEKYFATASRDKKVKVWE  646 (764)
T ss_pred             EEcccCcccceeEEecCCceEEEEe
Confidence            9999999999999999999999994

>KOG0649|consensus

Probab=99.08  E-value=2.2e-09  Score=62.72  Aligned_cols=65  Identities=14%  Similarity=0.093  Sum_probs=50.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~   73 (106)
                      ..|+.++.||+++|+....+..  |.+.+.++.--.....   +++|++||++|+||.++++++..+...
T Consensus       133 gGD~~~y~~dlE~G~i~r~~rG--HtDYvH~vv~R~~~~q---ilsG~EDGtvRvWd~kt~k~v~~ie~y  197 (325)
T KOG0649|consen  133 GGDGVIYQVDLEDGRIQREYRG--HTDYVHSVVGRNANGQ---ILSGAEDGTVRVWDTKTQKHVSMIEPY  197 (325)
T ss_pred             cCCeEEEEEEecCCEEEEEEcC--CcceeeeeeecccCcc---eeecCCCccEEEEeccccceeEEeccc
Confidence            4799999999999998555554  5666666544333444   689999999999999999988877643

>KOG1272|consensus

Probab=99.08  E-value=3.9e-10  Score=70.55  Aligned_cols=95  Identities=14%  Similarity=0.201  Sum_probs=78.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ....|.++.-|+.+|+.+..+...  ......+.-+|....   +-.|...|+|.+|+.....++..+-.|.    +.|.
T Consensus       227 ~~~~G~L~Y~DVS~GklVa~~~t~--~G~~~vm~qNP~NaV---ih~GhsnGtVSlWSP~skePLvKiLcH~----g~V~  297 (545)
T KOG1272|consen  227 ASEAGFLKYQDVSTGKLVASIRTG--AGRTDVMKQNPYNAV---IHLGHSNGTVSLWSPNSKEPLVKILCHR----GPVS  297 (545)
T ss_pred             cccCCceEEEeechhhhhHHHHcc--CCccchhhcCCccce---EEEcCCCceEEecCCCCcchHHHHHhcC----CCcc
Confidence            356788899999999985555442  333334555666655   7899999999999999888888888898    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++++.++|.++++.+.|+.++|||
T Consensus       298 siAv~~~G~YMaTtG~Dr~~kIWD  321 (545)
T KOG1272|consen  298 SIAVDRGGRYMATTGLDRKVKIWD  321 (545)
T ss_pred             eEEECCCCcEEeecccccceeEee
Confidence            999999999999999999999998

>KOG2048|consensus

Probab=99.07  E-value=2.8e-09  Score=69.10  Aligned_cols=96  Identities=19%  Similarity=0.194  Sum_probs=73.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCC--CCCCCCeeEeee---CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPE--LNSEPPACQTIP---SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      ...||.|++||.+.+..+.....+.  -..+..++.|+-   ....   +++|...|+|++||...+..+..+..|.   
T Consensus       172 Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t---I~sgDS~G~V~FWd~~~gTLiqS~~~h~---  245 (691)
T KOG2048|consen  172 GSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDST---IASGDSAGTVTFWDSIFGTLIQSHSCHD---  245 (691)
T ss_pred             cccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCc---EEEecCCceEEEEcccCcchhhhhhhhh---
Confidence            3568899999999998866333221  111123333322   2334   7999999999999999999999999998   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                       ..|.+++-.+++..+++++.|+++..+
T Consensus       246 -adVl~Lav~~~~d~vfsaGvd~~ii~~  272 (691)
T KOG2048|consen  246 -ADVLALAVADNEDRVFSAGVDPKIIQY  272 (691)
T ss_pred             -cceeEEEEcCCCCeEEEccCCCceEEE
Confidence             899999999999999999999987654

>KOG0643|consensus

Probab=99.07  E-value=1.1e-09  Score=64.51  Aligned_cols=76  Identities=11%  Similarity=0.056  Sum_probs=67.5

Q ss_pred             ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135         24 DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAK  103 (106)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~  103 (106)
                      ..+.|......+.|+..+..   |.+++.|....+|=..+|..+.++.+|.    +.|++++..-+...+++|+.|.+++
T Consensus         5 ~l~GHERplTqiKyN~eGDL---lFscaKD~~~~vw~s~nGerlGty~GHt----GavW~~Did~~s~~liTGSAD~t~k   77 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDL---LFSCAKDSTPTVWYSLNGERLGTYDGHT----GAVWCCDIDWDSKHLITGSADQTAK   77 (327)
T ss_pred             ccccCccccceEEecCCCcE---EEEecCCCCceEEEecCCceeeeecCCC----ceEEEEEecCCcceeeeccccceeE
Confidence            34445555667888888877   8999999999999888999999999999    8999999999999999999999999


Q ss_pred             EcC
Q psy17135        104 VFV  106 (106)
Q Consensus       104 iwd  106 (106)
                      +||
T Consensus        78 LWD   80 (327)
T KOG0643|consen   78 LWD   80 (327)
T ss_pred             EEE
Confidence            997

>KOG3881|consensus

Probab=99.06  E-value=1.5e-09  Score=66.52  Aligned_cols=96  Identities=16%  Similarity=0.201  Sum_probs=74.5

Q ss_pred             CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCC
Q psy17135          2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDE   79 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~   79 (106)
                      ++..-+++++||.+.++. +..+...  .....+..-.|.++.   +.+|...+.+..||.+.++.+.. +.+-.    +
T Consensus       221 t~T~~hqvR~YDt~~qRRPV~~fd~~--E~~is~~~l~p~gn~---Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t----G  291 (412)
T KOG3881|consen  221 TITRYHQVRLYDTRHQRRPVAQFDFL--ENPISSTGLTPSGNF---IYTGNTKGQLAKFDLRGGKLLGCGLKGIT----G  291 (412)
T ss_pred             EEecceeEEEecCcccCcceeEeccc--cCcceeeeecCCCcE---EEEecccchhheecccCceeeccccCCcc----C
Confidence            345668999999998765 2223332  223444555666666   89999999999999999987666 66666    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..+..+|.++++++|+-|+.+||+|
T Consensus       292 sirsih~hp~~~~las~GLDRyvRIhD  318 (412)
T KOG3881|consen  292 SIRSIHCHPTHPVLASCGLDRYVRIHD  318 (412)
T ss_pred             CcceEEEcCCCceEEeeccceeEEEee
Confidence            999999999999999999999999987

>KOG0307|consensus

Probab=99.05  E-value=8.5e-10  Score=74.67  Aligned_cols=98  Identities=15%  Similarity=0.174  Sum_probs=73.3

Q ss_pred             cCCCceEEEEeCccCceeeeccc--CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDC--PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      .-+||.|.|||++..+.  .+..  +...+.+.++.|+..-+..  |++++.++.+-|||++..+++-.+..+..+  ..
T Consensus       135 Ga~~geI~iWDlnn~~t--P~~~~~~~~~~eI~~lsWNrkvqhI--LAS~s~sg~~~iWDlr~~~pii~ls~~~~~--~~  208 (1049)
T KOG0307|consen  135 GADDGEILIWDLNKPET--PFTPGSQAPPSEIKCLSWNRKVSHI--LASGSPSGRAVIWDLRKKKPIIKLSDTPGR--MH  208 (1049)
T ss_pred             cCCCCcEEEeccCCcCC--CCCCCCCCCcccceEeccchhhhHH--hhccCCCCCceeccccCCCcccccccCCCc--cc
Confidence            45799999999998665  3333  2234568889999887776  899999999999999998877777666532  45


Q ss_pred             eEEEEEcCCCCE-EEEecCCC---eEEEcC
Q psy17135         81 ILDVAFHPSKPF-IASAGADG---LAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~-~~s~~~d~---~i~iwd  106 (106)
                      +..+.|+|+... +++++.|.   .|.+||
T Consensus       209 ~S~l~WhP~~aTql~~As~dd~~PviqlWD  238 (1049)
T KOG0307|consen  209 CSVLAWHPDHATQLLVASGDDSAPVIQLWD  238 (1049)
T ss_pred             eeeeeeCCCCceeeeeecCCCCCceeEeec
Confidence            788999997653 55555443   588887

>KOG2445|consensus

Probab=99.04  E-value=1.6e-09  Score=64.88  Aligned_cols=71  Identities=15%  Similarity=0.243  Sum_probs=59.3

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----cchheeccccccCCCCeEEEEEc-C-CCCEEEEecCCCeE
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----TCVQEITAHRKKFDESILDVAFH-P-SKPFIASAGADGLA  102 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----~~~~~~~~~~~~~~~~v~~~~~~-~-~~~~~~s~~~d~~i  102 (106)
                      .+-+.++.|.+.+..   +++|+.|++++|||.+..    .+......|.    +.|..+.|- | =|+.+|+|+.|+++
T Consensus        13 ~DlihdVs~D~~GRR---mAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~----~Si~rV~WAhPEfGqvvA~cS~Drtv   85 (361)
T KOG2445|consen   13 KDLIHDVSFDFYGRR---MATCSSDQTVKIWDSTSDSGTWSCTSSWRAHD----GSIWRVVWAHPEFGQVVATCSYDRTV   85 (361)
T ss_pred             cceeeeeeecccCce---eeeccCCCcEEEEeccCCCCceEEeeeEEecC----CcEEEEEecCccccceEEEEecCCce
Confidence            345777889999988   899999999999997644    3566777888    899999984 4 57889999999999


Q ss_pred             EEcC
Q psy17135        103 KVFV  106 (106)
Q Consensus       103 ~iwd  106 (106)
                      .||.
T Consensus        86 ~iWE   89 (361)
T KOG2445|consen   86 SIWE   89 (361)
T ss_pred             eeee
Confidence            9995

>KOG1273|consensus

Probab=99.03  E-value=1.4e-09  Score=65.55  Aligned_cols=77  Identities=14%  Similarity=0.192  Sum_probs=60.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      -.||.|.|||+.+...  ......|...+.++.|++.+..   |+|++.|..+.+||+..|.+++.+.-.     +.|+.
T Consensus        42 c~nG~vvI~D~~T~~i--ar~lsaH~~pi~sl~WS~dgr~---LltsS~D~si~lwDl~~gs~l~rirf~-----spv~~  111 (405)
T KOG1273|consen   42 CANGRVVIYDFDTFRI--ARMLSAHVRPITSLCWSRDGRK---LLTSSRDWSIKLWDLLKGSPLKRIRFD-----SPVWG  111 (405)
T ss_pred             ccCCcEEEEEccccch--hhhhhccccceeEEEecCCCCE---eeeecCCceeEEEeccCCCceeEEEcc-----Cccce
Confidence            3689999999998875  3333334445777999999998   899999999999999999988877644     46777


Q ss_pred             EEEcCCC
Q psy17135         84 VAFHPSK   90 (106)
Q Consensus        84 ~~~~~~~   90 (106)
                      ..|+|..
T Consensus       112 ~q~hp~k  118 (405)
T KOG1273|consen  112 AQWHPRK  118 (405)
T ss_pred             eeecccc
Confidence            7777733

>KOG0641|consensus

Probab=99.00  E-value=1.1e-08  Score=59.41  Aligned_cols=94  Identities=15%  Similarity=0.200  Sum_probs=76.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---c-chheeccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---T-CVQEITAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~-~~~~~~~~~~~~~   78 (106)
                      .-.|....+||++.++.+.++..  |...+.++.|+|...+   +++++.|..|++=|++..   + ++-.+-.|.    
T Consensus       249 g~~dssc~lydirg~r~iq~f~p--hsadir~vrfsp~a~y---llt~syd~~ikltdlqgdla~el~~~vv~ehk----  319 (350)
T KOG0641|consen  249 GHADSSCMLYDIRGGRMIQRFHP--HSADIRCVRFSPGAHY---LLTCSYDMKIKLTDLQGDLAHELPIMVVAEHK----  319 (350)
T ss_pred             ccCCCceEEEEeeCCceeeeeCC--CccceeEEEeCCCceE---EEEecccceEEEeecccchhhcCceEEEEecc----
Confidence            35688899999999998777776  4667888999998888   899999999999998632   1 122333455    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.+....|+|..-.+++.+.|.++.+|
T Consensus       320 dk~i~~rwh~~d~sfisssadkt~tlw  346 (350)
T KOG0641|consen  320 DKAIQCRWHPQDFSFISSSADKTATLW  346 (350)
T ss_pred             CceEEEEecCccceeeeccCcceEEEe
Confidence            778888999998889999999999999

>KOG0290|consensus

Probab=98.99  E-value=7.8e-09  Score=61.75  Aligned_cols=96  Identities=19%  Similarity=0.352  Sum_probs=68.8

Q ss_pred             CCceEEEEeCccCce-------eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hheecccc
Q psy17135          5 PSSVIYIWTLLELQT-------YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAHR   74 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~~   74 (106)
                      .+-.+|+|.+...+.       +...+..++.....+..|+......  +.+.+-|.++.+||++++..   ..++.+|.
T Consensus       119 s~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~--igtSSiDTTCTiWdie~~~~~~vkTQLIAHD  196 (364)
T KOG0290|consen  119 SSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNL--IGTSSIDTTCTIWDIETGVSGTVKTQLIAHD  196 (364)
T ss_pred             ccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcce--eEeecccCeEEEEEEeeccccceeeEEEecC
Confidence            345799999874221       1111111122334556777766665  88999999999999998743   56778888


Q ss_pred             ccCCCCeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                          ..|+.++|...+ ..++|++.||.+|+||
T Consensus       197 ----KEV~DIaf~~~s~~~FASvgaDGSvRmFD  225 (364)
T KOG0290|consen  197 ----KEVYDIAFLKGSRDVFASVGADGSVRMFD  225 (364)
T ss_pred             ----cceeEEEeccCccceEEEecCCCcEEEEE
Confidence                899999999844 4699999999999997

>KOG1587|consensus

Probab=98.98  E-value=1.3e-08  Score=66.15  Aligned_cols=98  Identities=16%  Similarity=0.194  Sum_probs=72.8

Q ss_pred             CCCceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCC
Q psy17135          4 VPSSVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~   80 (106)
                      .+++.+.+|+++.. .+...+..   .+.+.++.|.|..+..  ++.|..+|+|.+||++.+..  ...+..+...|...
T Consensus       219 ~~~~~~~vW~~~~p~~Pe~~~~~---~s~v~~~~f~p~~p~l--l~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~  293 (555)
T KOG1587|consen  219 EPDGVLLVWSLKNPNTPELVLES---PSEVTCLKFCPFDPNL--LAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEP  293 (555)
T ss_pred             cCCceEEEEecCCCCCceEEEec---CCceeEEEeccCCcce--EEeeccCceEEEEEccCCCCCCCcccccccccCCcC
Confidence            34568999999876 33334444   5668889999998886  78999999999999997654  34443333333488


Q ss_pred             eEEEEEcCCCCE--EEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPF--IASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~--~~s~~~d~~i~iwd  106 (106)
                      +..+.|-.+...  +++++.||.|..|+
T Consensus       294 v~~vvW~~~~~~~~f~s~ssDG~i~~W~  321 (555)
T KOG1587|consen  294 VTAVVWLQNEHNTEFFSLSSDGSICSWD  321 (555)
T ss_pred             eEEEEEeccCCCCceEEEecCCcEeeee
Confidence            999998664444  99999999999984

>KOG2106|consensus

Probab=98.98  E-value=8.8e-09  Score=65.36  Aligned_cols=91  Identities=12%  Similarity=0.163  Sum_probs=70.3

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      +++.-|+++++|+  ..+++.....   .....++.|+|.+ .   ++.|...|.-.+.|.++...+..... .    ..
T Consensus       384 ~T~gqdk~v~lW~--~~k~~wt~~~---~d~~~~~~fhpsg-~---va~Gt~~G~w~V~d~e~~~lv~~~~d-~----~~  449 (626)
T KOG2106|consen  384 LTCGQDKHVRLWN--DHKLEWTKII---EDPAECADFHPSG-V---VAVGTATGRWFVLDTETQDLVTIHTD-N----EQ  449 (626)
T ss_pred             eeccCcceEEEcc--CCceeEEEEe---cCceeEeeccCcc-e---EEEeeccceEEEEecccceeEEEEec-C----Cc
Confidence            3677899999999  3343223333   2346778899988 5   79999999999999988554433333 4    79


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.+++|+|+|..+|.|+.|+.|++|
T Consensus       450 ls~v~ysp~G~~lAvgs~d~~iyiy  474 (626)
T KOG2106|consen  450 LSVVRYSPDGAFLAVGSHDNHIYIY  474 (626)
T ss_pred             eEEEEEcCCCCEEEEecCCCeEEEE
Confidence            9999999999999999999999887

>KOG1034|consensus

Probab=98.97  E-value=9.9e-09  Score=62.08  Aligned_cols=98  Identities=18%  Similarity=0.236  Sum_probs=75.8

Q ss_pred             CCceEEEEeCccCce---eeecccCCCCCCCCeeEeeeCCCC-ceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          5 PSSVIYIWTLLELQT---YARNDCPELNSEPPACQTIPSSNI-SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ....+.+|+......   +....-+.+......|.|.-.... ..+++.++.-|.|++.|+.++++...+.+|.    ..
T Consensus        62 G~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG----~s  137 (385)
T KOG1034|consen   62 GGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHG----GS  137 (385)
T ss_pred             CCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccC----cc
Confidence            456677888765442   223333334445677888777664 4567888899999999999999999999998    89


Q ss_pred             eEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      |..+.++|+. ++++++|.|..|++|+
T Consensus       138 INeik~~p~~~qlvls~SkD~svRlwn  164 (385)
T KOG1034|consen  138 INEIKFHPDRPQLVLSASKDHSVRLWN  164 (385)
T ss_pred             chhhhcCCCCCcEEEEecCCceEEEEe
Confidence            9999999955 5789999999999996

>KOG0771|consensus

Probab=98.97  E-value=2e-09  Score=66.33  Aligned_cols=66  Identities=27%  Similarity=0.438  Sum_probs=57.3

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..++++..+..   +++++.||.+|+|++.+-..+.....|.    ..|.++.|+||+..+++-+.| ..++|+
T Consensus       148 k~vaf~~~gs~---latgg~dg~lRv~~~Ps~~t~l~e~~~~----~eV~DL~FS~dgk~lasig~d-~~~VW~  213 (398)
T KOG0771|consen  148 KVVAFNGDGSK---LATGGTDGTLRVWEWPSMLTILEEIAHH----AEVKDLDFSPDGKFLASIGAD-SARVWS  213 (398)
T ss_pred             eEEEEcCCCCE---eeeccccceEEEEecCcchhhhhhHhhc----CccccceeCCCCcEEEEecCC-ceEEEE
Confidence            56778887777   8999999999999987766666667777    899999999999999999999 888986

>KOG2055|consensus

Probab=98.97  E-value=6.5e-09  Score=65.10  Aligned_cols=94  Identities=10%  Similarity=0.164  Sum_probs=75.4

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .+.|.|.+.-.++++.+..++.   .+.+....|..++..   ++..+.+|.|.+||++...+++.+.....   -.-+.
T Consensus       322 G~~G~I~lLhakT~eli~s~Ki---eG~v~~~~fsSdsk~---l~~~~~~GeV~v~nl~~~~~~~rf~D~G~---v~gts  392 (514)
T KOG2055|consen  322 GNNGHIHLLHAKTKELITSFKI---EGVVSDFTFSSDSKE---LLASGGTGEVYVWNLRQNSCLHRFVDDGS---VHGTS  392 (514)
T ss_pred             ccCceEEeehhhhhhhhheeee---ccEEeeEEEecCCcE---EEEEcCCceEEEEecCCcceEEEEeecCc---cceee
Confidence            4678899999999998887777   455666788877765   67777789999999999988888765541   23456


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.++++.++|+|+..|.|.|||
T Consensus       393 ~~~S~ng~ylA~GS~~GiVNIYd  415 (514)
T KOG2055|consen  393 LCISLNGSYLATGSDSGIVNIYD  415 (514)
T ss_pred             eeecCCCceEEeccCcceEEEec
Confidence            67788999999999999999986

>KOG1274|consensus

Probab=98.96  E-value=8.3e-09  Score=68.96  Aligned_cols=93  Identities=16%  Similarity=0.290  Sum_probs=78.4

Q ss_pred             CcCCCceEEEEeCccCce---eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135          2 QKVPSSVIYIWTLLELQT---YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      +.+.+++|..|...+++.   +.++..     ....+.++..+..   ++.|+.|-.|++-++.+......+.+|.    
T Consensus        71 ~~s~~~tv~~y~fps~~~~~iL~Rftl-----p~r~~~v~g~g~~---iaagsdD~~vK~~~~~D~s~~~~lrgh~----  138 (933)
T KOG1274|consen   71 TGSEQNTVLRYKFPSGEEDTILARFTL-----PIRDLAVSGSGKM---IAAGSDDTAVKLLNLDDSSQEKVLRGHD----  138 (933)
T ss_pred             EeeccceEEEeeCCCCCccceeeeeec-----cceEEEEecCCcE---EEeecCceeEEEEeccccchheeecccC----
Confidence            346678899998877654   333443     3566777787777   8999999999999999998899999998    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.++.|+|.+.+||+++-||.+++||
T Consensus       139 apVl~l~~~p~~~fLAvss~dG~v~iw~  166 (933)
T KOG1274|consen  139 APVLQLSYDPKGNFLAVSSCDGKVQIWD  166 (933)
T ss_pred             CceeeeeEcCCCCEEEEEecCceEEEEE
Confidence            9999999999999999999999999996

>KOG2096|consensus

Probab=98.96  E-value=1.1e-08  Score=61.85  Aligned_cols=58  Identities=29%  Similarity=0.411  Sum_probs=50.0

Q ss_pred             ceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         44 SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        44 ~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..++++++.|..|.+|+++ |+.+..+....    ..-+..+.||+|+++++++.--.+++|.
T Consensus       199 ~k~imsas~dt~i~lw~lk-Gq~L~~idtnq----~~n~~aavSP~GRFia~~gFTpDVkVwE  256 (420)
T KOG2096|consen  199 AKYIMSASLDTKICLWDLK-GQLLQSIDTNQ----SSNYDAAVSPDGRFIAVSGFTPDVKVWE  256 (420)
T ss_pred             ceEEEEecCCCcEEEEecC-Cceeeeecccc----ccccceeeCCCCcEEEEecCCCCceEEE
Confidence            4567999999999999998 99898888776    5567778999999999999988898884

>KOG2394|consensus

Probab=98.96  E-value=1.7e-09  Score=68.80  Aligned_cols=75  Identities=13%  Similarity=0.178  Sum_probs=63.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..||.+||+|..+.+++-..+.  ...+..++.|+|++.+   +++|++|-.|.+|.+..++.+..=++|.    .-|..
T Consensus       309 SqDGfLRvF~fdt~eLlg~mkS--YFGGLLCvcWSPDGKy---IvtGGEDDLVtVwSf~erRVVARGqGHk----SWVs~  379 (636)
T KOG2394|consen  309 SQDGFLRIFDFDTQELLGVMKS--YFGGLLCVCWSPDGKY---IVTGGEDDLVTVWSFEERRVVARGQGHK----SWVSV  379 (636)
T ss_pred             ecCceEEEeeccHHHHHHHHHh--hccceEEEEEcCCccE---EEecCCcceEEEEEeccceEEEeccccc----cceee
Confidence            4699999999999887444443  3567888999999999   8999999999999999888887777787    78888


Q ss_pred             EEEc
Q psy17135         84 VAFH   87 (106)
Q Consensus        84 ~~~~   87 (106)
                      ++|.
T Consensus       380 VaFD  383 (636)
T KOG2394|consen  380 VAFD  383 (636)
T ss_pred             Eeec
Confidence            8886

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=98.95  E-value=1.7e-08  Score=61.92  Aligned_cols=94  Identities=18%  Similarity=0.360  Sum_probs=73.6

Q ss_pred             CCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC-CCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          4 VPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH-DCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ..|+.+.+||... .........  |...+..+.+.|.+..   +++++. ++.+++|+...+..+..+..|.    ..+
T Consensus       131 ~~d~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v  201 (466)
T COG2319         131 SLDGTVKLWDLSTPGKLIRTLEG--HSESVTSLAFSPDGKL---LASGSSLDGTIKLWDLRTGKPLSTLAGHT----DPV  201 (466)
T ss_pred             CCCccEEEEEecCCCeEEEEEec--CcccEEEEEECCCCCE---EEecCCCCCceEEEEcCCCceEEeeccCC----Cce
Confidence            3488999999987 555334443  3444556888998885   677775 9999999999877788888777    899


Q ss_pred             EEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|++. .+++++.|+.+++||
T Consensus       202 ~~~~~~~~~~~~~~~~~~d~~i~~wd  227 (466)
T COG2319         202 SSLAFSPDGGLLIASGSSDGTIRLWD  227 (466)
T ss_pred             EEEEEcCCcceEEEEecCCCcEEEEE
Confidence            9999999887 566669999999884

>KOG1310|consensus

Probab=98.94  E-value=6.6e-09  Score=66.64  Aligned_cols=98  Identities=16%  Similarity=0.251  Sum_probs=78.0

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----------cchheecc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----------TCVQEITA   72 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----------~~~~~~~~   72 (106)
                      .+.|-.+.|||....++++..... |...+.++.|.|......+ ++|..|..|+++|+...          ..++.+..
T Consensus        68 GSDD~r~ivWd~~~~KllhsI~Tg-HtaNIFsvKFvP~tnnriv-~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~c  145 (758)
T KOG1310|consen   68 GSDDTRLIVWDPFEYKLLHSISTG-HTANIFSVKFVPYTNNRIV-LSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSC  145 (758)
T ss_pred             cCCcceEEeecchhcceeeeeecc-cccceeEEeeeccCCCeEE-EeccCcceEEEEecccccccccccCccchhhhhhh
Confidence            467888999999988886666553 4556888999999877665 89999999999999842          33455666


Q ss_pred             ccccCCCCeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      |.    .+|-.++-.|++ ..+.+++.||+++.+|
T Consensus       146 ht----~rVKria~~p~~PhtfwsasEDGtirQyD  176 (758)
T KOG1310|consen  146 HT----DRVKRIATAPNGPHTFWSASEDGTIRQYD  176 (758)
T ss_pred             hh----hhhhheecCCCCCceEEEecCCcceeeec
Confidence            76    788888888988 5699999999999876

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.94  E-value=1.8e-08  Score=57.80  Aligned_cols=68  Identities=12%  Similarity=0.151  Sum_probs=51.5

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCC---CeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD---GLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~i~iwd  106 (106)
                      .+..+.|+|.+....+ +.|..+..+.+||++ ++.+..+.  .    ..+..+.|+|+|++++.++.+   |.+.+||
T Consensus        61 ~I~~~~WsP~g~~fav-i~g~~~~~v~lyd~~-~~~i~~~~--~----~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd  131 (194)
T PF08662_consen   61 PIHDVAWSPNGNEFAV-IYGSMPAKVTLYDVK-GKKIFSFG--T----QPRNTISWSPDGRFLVLAGFGNLNGDLEFWD  131 (194)
T ss_pred             ceEEEEECcCCCEEEE-EEccCCcccEEEcCc-ccEeEeec--C----CCceEEEECCCCCEEEEEEccCCCcEEEEEE
Confidence            4778999999887422 456677899999996 55555553  3    466789999999999988744   5699997

>KOG4328|consensus

Probab=98.93  E-value=2.5e-09  Score=66.82  Aligned_cols=98  Identities=15%  Similarity=0.086  Sum_probs=71.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDES   80 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~   80 (106)
                      ..+.||+|++-|+++......+...........+.+......   ++.+..-|...+||.+++. .+..+.-|.    ..
T Consensus       252 ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~---vl~~~~~G~f~~iD~R~~~s~~~~~~lh~----kK  324 (498)
T KOG4328|consen  252 SSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRS---VLFGDNVGNFNVIDLRTDGSEYENLRLHK----KK  324 (498)
T ss_pred             eeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCcc---EEEeecccceEEEEeecCCccchhhhhhh----cc
Confidence            356899999999998766333443222333444555555555   5666666788999999865 466777787    79


Q ss_pred             eEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      |..++++|...+ +++|+.|++++|||
T Consensus       325 I~sv~~NP~~p~~laT~s~D~T~kIWD  351 (498)
T KOG4328|consen  325 ITSVALNPVCPWFLATASLDQTAKIWD  351 (498)
T ss_pred             cceeecCCCCchheeecccCcceeeee
Confidence            999999996665 89999999999998

>KOG4378|consensus

Probab=98.92  E-value=6.7e-09  Score=65.88  Aligned_cols=95  Identities=17%  Similarity=0.166  Sum_probs=73.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .-.++|+|||++...+ +++.. .|.+.+.++.|+-...+   +++++..|.|-+..+.++.....+.....   ..|.-
T Consensus        98 G~~~~Vkiwdl~~kl~-hr~lk-dh~stvt~v~YN~~Dey---iAsvs~gGdiiih~~~t~~~tt~f~~~sg---qsvRl  169 (673)
T KOG4378|consen   98 GQSGCVKIWDLRAKLI-HRFLK-DHQSTVTYVDYNNTDEY---IASVSDGGDIIIHGTKTKQKTTTFTIDSG---QSVRL  169 (673)
T ss_pred             CcCceeeehhhHHHHH-hhhcc-CCcceeEEEEecCCcce---eEEeccCCcEEEEecccCccccceecCCC---CeEEE
Confidence            3468999999995444 33333 34556777888888888   89999999999999998887777765542   45668


Q ss_pred             EEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      +.|+|..+. |.+++.+|.|.+||
T Consensus       170 l~ys~skr~lL~~asd~G~VtlwD  193 (673)
T KOG4378|consen  170 LRYSPSKRFLLSIASDKGAVTLWD  193 (673)
T ss_pred             eecccccceeeEeeccCCeEEEEe
Confidence            999997665 78899999999998

>KOG1524|consensus

Probab=98.88  E-value=7.4e-09  Score=66.25  Aligned_cols=98  Identities=16%  Similarity=0.205  Sum_probs=67.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC---------Cccchheecc-
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD---------NKTCVQEITA-   72 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~---------~~~~~~~~~~-   72 (106)
                      +.+||.+.|.+-. ++.  ......|...+.+..|+|++..   ++++++||.|++|.-.         .+..++.... 
T Consensus        81 ~s~DGkf~il~k~-~rV--E~sv~AH~~A~~~gRW~~dGtg---Llt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~  154 (737)
T KOG1524|consen   81 CSNDGRFVILNKS-ARV--ERSISAHAAAISSGRWSPDGAG---LLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWA  154 (737)
T ss_pred             EcCCceEEEeccc-chh--hhhhhhhhhhhhhcccCCCCce---eeeecCCceEEEEeccchHHHHHhhcCceeEEEEEC
Confidence            4677777776533 222  2233345666777899999888   8999999999999732         1111111000 


Q ss_pred             ------------c---------c-----ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 ------------H---------R-----KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ------------~---------~-----~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                  |         .     +.|.+-|.++.|++....+++|+.|-..++||
T Consensus       155 p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD  214 (737)
T KOG1524|consen  155 PNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWD  214 (737)
T ss_pred             CCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeec
Confidence                        0         0     01447899999999999999999999999998

>KOG2055|consensus

Probab=98.88  E-value=3.9e-08  Score=61.77  Aligned_cols=100  Identities=11%  Similarity=0.161  Sum_probs=70.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc------cchheecc----
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK------TCVQEITA----   72 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~------~~~~~~~~----   72 (106)
                      +..+|.|.+||++...+++++.-+..- ...+++-++.+.+   +++|+..|.|.|||.++.      ++++.+..    
T Consensus       362 ~~~~GeV~v~nl~~~~~~~rf~D~G~v-~gts~~~S~ng~y---lA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~  437 (514)
T KOG2055|consen  362 SGGTGEVYVWNLRQNSCLHRFVDDGSV-HGTSLCISLNGSY---LATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTA  437 (514)
T ss_pred             EcCCceEEEEecCCcceEEEEeecCcc-ceeeeeecCCCce---EEeccCcceEEEeccchhhccCCCCchhhhhhhhee
Confidence            457899999999999988888764322 2333444566665   899999999999995532      22221100    


Q ss_pred             ---------------------------cc------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 ---------------------------HR------------KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ---------------------------~~------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                 |.            ...-..++|++|+|.+-+++.|-.+|.+.+|.
T Consensus       438 Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k  510 (514)
T KOG2055|consen  438 ITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK  510 (514)
T ss_pred             eeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence                                       00            00115789999999999999999999999984

>KOG4714|consensus

Probab=98.88  E-value=5.1e-09  Score=61.65  Aligned_cols=69  Identities=23%  Similarity=0.318  Sum_probs=57.6

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      +.++.-+|..+..  +++|+.||.+-+||.++.. +...+.+|+    ..++.+.|+| +...|++++.||.+..||
T Consensus       182 v~~l~~hp~qq~~--v~cgt~dg~~~l~d~rn~~~p~S~l~ahk----~~i~eV~FHpk~p~~Lft~sedGslw~wd  252 (319)
T KOG4714|consen  182 VTALCSHPAQQHL--VCCGTDDGIVGLWDARNVAMPVSLLKAHK----AEIWEVHFHPKNPEHLFTCSEDGSLWHWD  252 (319)
T ss_pred             chhhhCCcccccE--EEEecCCCeEEEEEcccccchHHHHHHhh----hhhhheeccCCCchheeEecCCCcEEEEc
Confidence            5556667776665  6899999999999999874 556678888    8999999999 667899999999999987

>KOG0974|consensus

Probab=98.86  E-value=9.8e-09  Score=69.20  Aligned_cols=94  Identities=18%  Similarity=0.294  Sum_probs=76.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .+.|.++|+|++.+.+... .....|..++..+.+.|.  .   ++|+++|.+.++|+.+ ++.+..+..|..   ..+.
T Consensus       193 ~SdDRsiRlW~i~s~~~~~-~~~fgHsaRvw~~~~~~n--~---i~t~gedctcrvW~~~-~~~l~~y~~h~g---~~iw  262 (967)
T KOG0974|consen  193 VSDDRSIRLWPIDSREVLG-CTGFGHSARVWACCFLPN--R---IITVGEDCTCRVWGVN-GTQLEVYDEHSG---KGIW  262 (967)
T ss_pred             EecCcceeeeecccccccC-cccccccceeEEEEeccc--e---eEEeccceEEEEEecc-cceehhhhhhhh---ccee
Confidence            4678999999999988754 233345666777888887  4   7999999999999774 555667888875   7899


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++..+.....++++.|+.+++||
T Consensus       263 ~~~~~~~~~~~vT~g~Ds~lk~~~  286 (967)
T KOG0974|consen  263 KIAVPIGVIIKVTGGNDSTLKLWD  286 (967)
T ss_pred             EEEEcCCceEEEeeccCcchhhhh
Confidence            999999999999999999999986

>KOG1310|consensus

Probab=98.84  E-value=1.5e-08  Score=65.04  Aligned_cols=72  Identities=19%  Similarity=0.299  Sum_probs=62.0

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcC--CCCEEEEecCCCeEEE
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHP--SKPFIASAGADGLAKV  104 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~i~i  104 (106)
                      |.+-+.++.|+..+..   |++|+.|..+.|||.-..+.+..+ .+|.    ..|++++|-|  +.+.++||..|..|++
T Consensus        49 H~GCVN~LeWn~dG~l---L~SGSDD~r~ivWd~~~~KllhsI~TgHt----aNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   49 HTGCVNCLEWNADGEL---LASGSDDTRLIVWDPFEYKLLHSISTGHT----ANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             ccceecceeecCCCCE---EeecCCcceEEeecchhcceeeeeecccc----cceeEEeeeccCCCeEEEeccCcceEEE
Confidence            5666788999998888   999999999999999877776665 4676    8999999998  5668999999999999


Q ss_pred             cC
Q psy17135        105 FV  106 (106)
Q Consensus       105 wd  106 (106)
                      ||
T Consensus       122 fd  123 (758)
T KOG1310|consen  122 FD  123 (758)
T ss_pred             Ee
Confidence            86

>KOG1272|consensus

Probab=98.83  E-value=1.4e-08  Score=63.88  Aligned_cols=90  Identities=8%  Similarity=0.208  Sum_probs=69.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      -..|+|.+|.-...+++....+  |.+.+.++...+.+.+   ++|.+.|..++|||+++-..+.++.. +    -....
T Consensus       270 hsnGtVSlWSP~skePLvKiLc--H~g~V~siAv~~~G~Y---MaTtG~Dr~~kIWDlR~~~ql~t~~t-p----~~a~~  339 (545)
T KOG1272|consen  270 HSNGTVSLWSPNSKEPLVKILC--HRGPVSSIAVDRGGRY---MATTGLDRKVKIWDLRNFYQLHTYRT-P----HPASN  339 (545)
T ss_pred             CCCceEEecCCCCcchHHHHHh--cCCCcceEEECCCCcE---EeecccccceeEeeeccccccceeec-C----CCccc
Confidence            3579999999999999877777  4556777888888888   89999999999999998776666554 2    35566


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +++|..+  +.+++....+.+|
T Consensus       340 ls~Sqkg--lLA~~~G~~v~iw  359 (545)
T KOG1272|consen  340 LSLSQKG--LLALSYGDHVQIW  359 (545)
T ss_pred             ccccccc--ceeeecCCeeeee
Confidence            7777544  5556666677777

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=98.82  E-value=1.3e-07  Score=58.15  Aligned_cols=93  Identities=19%  Similarity=0.391  Sum_probs=71.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~   83 (106)
                      .|+.+++|++..+..+.....  |...+..+.|.|.+..  .+++++.|+.+++||...+..+. .+..|.    ... .
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~--~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~----~~~-~  246 (466)
T COG2319         176 LDGTIKLWDLRTGKPLSTLAG--HTDPVSSLAFSPDGGL--LIASGSSDGTIRLWDLSTGKLLRSTLSGHS----DSV-V  246 (466)
T ss_pred             CCCceEEEEcCCCceEEeecc--CCCceEEEEEcCCcce--EEEEecCCCcEEEEECCCCcEEeeecCCCC----cce-e
Confidence            489999999998666555554  4556777888877662  25566999999999988777766 577776    454 3


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|+|++..+++++.|+.+++|+
T Consensus       247 ~~~~~~~~~~~~~~~d~~~~~~~  269 (466)
T COG2319         247 SSFSPDGSLLASGSSDGTIRLWD  269 (466)
T ss_pred             EeECCCCCEEEEecCCCcEEEee
Confidence            38999988888999999999996

>KOG0974|consensus

Probab=98.82  E-value=4.7e-08  Score=66.10  Aligned_cols=90  Identities=20%  Similarity=0.250  Sum_probs=71.6

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~   84 (106)
                      .+.|.+|+....+.  ......|...+..+.|+.++.+   +++.|+|+++++|++++.+... ...+|.    .+++.+
T Consensus       154 ~~~iivW~~~~dn~--p~~l~GHeG~iF~i~~s~dg~~---i~s~SdDRsiRlW~i~s~~~~~~~~fgHs----aRvw~~  224 (967)
T KOG0974|consen  154 FGEIIVWKPHEDNK--PIRLKGHEGSIFSIVTSLDGRY---IASVSDDRSIRLWPIDSREVLGCTGFGHS----ARVWAC  224 (967)
T ss_pred             cccEEEEeccccCC--cceecccCCceEEEEEccCCcE---EEEEecCcceeeeecccccccCccccccc----ceeEEE
Confidence            46789999873332  2222224555667888888888   8999999999999999987665 667788    999999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.|.  .+++++.|.+.++|+
T Consensus       225 ~~~~n--~i~t~gedctcrvW~  244 (967)
T KOG0974|consen  225 CFLPN--RIITVGEDCTCRVWG  244 (967)
T ss_pred             Eeccc--eeEEeccceEEEEEe
Confidence            99998  899999999999994

>KOG0771|consensus

Probab=98.82  E-value=4.2e-08  Score=60.67  Aligned_cols=98  Identities=18%  Similarity=0.247  Sum_probs=73.0

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-----------
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-----------   71 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-----------   71 (106)
                      ...||++|+|+..+...  ......|+..+..+.|+|++..   +++.+.| ..++|+.+++.++....           
T Consensus       162 gg~dg~lRv~~~Ps~~t--~l~e~~~~~eV~DL~FS~dgk~---lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~c  235 (398)
T KOG0771|consen  162 GGTDGTLRVWEWPSMLT--ILEEIAHHAEVKDLDFSPDGKF---LASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSC  235 (398)
T ss_pred             ccccceEEEEecCcchh--hhhhHhhcCccccceeCCCCcE---EEEecCC-ceEEEEeccCchhhhcCCcccchhhhhc
Confidence            35799999999876665  4444456777888999999988   8999998 89999999884332221           


Q ss_pred             -----c------------ccc----------------------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 -----A------------HRK----------------------KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 -----~------------~~~----------------------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                           .            ..+                      .....+.+++.+++|++++-|+-||.|.+++
T Consensus       236 RF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~  309 (398)
T KOG0771|consen  236 RFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYD  309 (398)
T ss_pred             eecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEE
Confidence                 0            000                      0113788899999999999999999988764

>KOG0280|consensus

Probab=98.81  E-value=7e-08  Score=57.74  Aligned_cols=96  Identities=16%  Similarity=0.119  Sum_probs=63.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchhe-eccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQE-ITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~-~~~~~~~~~~~v~   82 (106)
                      .+|.+.+-+.........-..+.|.-+.-.+.|....+..  +.+|+.|+.+..||.+- ++.+.+ ...|.    .+|.
T Consensus       141 s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnl--vytGgDD~~l~~~D~R~p~~~i~~n~kvH~----~GV~  214 (339)
T KOG0280|consen  141 SRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNL--VYTGGDDGSLSCWDIRIPKTFIWHNSKVHT----SGVV  214 (339)
T ss_pred             CCCcEEEEecceeeeeecccccccceeeeeeecccCCCce--EEecCCCceEEEEEecCCcceeeecceeee----cceE
Confidence            4455554444333332222333345455557777666654  68999999999999993 333322 23344    8999


Q ss_pred             EEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.-+| ...++++|+.|-.|++||
T Consensus       215 SI~ss~~~~~~I~TGsYDe~i~~~D  239 (339)
T KOG0280|consen  215 SIYSSPPKPTYIATGSYDECIRVLD  239 (339)
T ss_pred             EEecCCCCCceEEEeccccceeeee
Confidence            998887 566899999999999997

>KOG1517|consensus

Probab=98.81  E-value=5.5e-08  Score=66.53  Aligned_cols=97  Identities=16%  Similarity=0.092  Sum_probs=66.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCCCe
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDESI   81 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~v   81 (106)
                      .-..|+|||+..-........... +.+..+  ++....+..++.|..||.|++||.+...   .+.....|...  ..|
T Consensus      1185 d~r~IRIWDa~~E~~~~diP~~s~-t~vTaL--S~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~--~~I 1259 (1387)
T KOG1517|consen 1185 DVRSIRIWDAHKEQVVADIPYGSS-TLVTAL--SADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDV--EPI 1259 (1387)
T ss_pred             CeeEEEEEecccceeEeecccCCC-ccceee--cccccCCceEEEeecCCceEEeecccCCccccceeecccCCc--ccc
Confidence            356899999987776554444321 222222  2222223448999999999999988653   34555666521  238


Q ss_pred             EEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      ..+.+.+.|-. ++||+.+|.|++||
T Consensus      1260 v~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1260 VHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred             eeEEeecCCCcceeeeccCCeEEEEe
Confidence            99999886665 99999999999997

>KOG2106|consensus

Probab=98.79  E-value=1.8e-07  Score=59.67  Aligned_cols=93  Identities=13%  Similarity=0.219  Sum_probs=71.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCC--CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELN--SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .-+.+..|+.+.+....+-...+..  ..+.++.|.+.+.    ++||..+|.+.||+..+.+..++..+|.    ..|+
T Consensus       220 Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd----viTgDS~G~i~Iw~~~~~~~~k~~~aH~----ggv~  291 (626)
T KOG2106|consen  220 GKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD----VITGDSGGNILIWSKGTNRISKQVHAHD----GGVF  291 (626)
T ss_pred             CCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC----EEeecCCceEEEEeCCCceEEeEeeecC----CceE
Confidence            3578999999988776554332211  2344456666554    5999999999999998888777777888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++..-.+|.++. |+.|+.|..||
T Consensus       292 ~L~~lr~GtllS-GgKDRki~~Wd  314 (626)
T KOG2106|consen  292 SLCMLRDGTLLS-GGKDRKIILWD  314 (626)
T ss_pred             EEEEecCccEee-cCccceEEecc
Confidence            999888887665 99999999997

>KOG0642|consensus

Probab=98.79  E-value=8.7e-09  Score=65.75  Aligned_cols=71  Identities=23%  Similarity=0.325  Sum_probs=60.3

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--------cchheeccccccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d   99 (106)
                      |.+.+....+.+....   ++++++|+.+++|.+...        +++.++.+|.    +.|.|+.+.+++.++.+|+-|
T Consensus       293 ~~d~ir~l~~~~sep~---lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~----gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  293 HDDCIRALAFHPSEPV---LITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHE----GPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             chhhhhhhhcCCCCCe---EEEeccccchhhhhhcccCCccccceeeeEEEeccc----CceEEEEecCCceEEEeeccC
Confidence            4445666777887777   899999999999999321        3467788998    899999999999999999999


Q ss_pred             CeEEEc
Q psy17135        100 GLAKVF  105 (106)
Q Consensus       100 ~~i~iw  105 (106)
                      |+|+.|
T Consensus       366 g~I~~w  371 (577)
T KOG0642|consen  366 GTIRCW  371 (577)
T ss_pred             ceeeee
Confidence            999999

>KOG0650|consensus

Probab=98.78  E-value=8.3e-09  Score=66.57  Aligned_cols=90  Identities=20%  Similarity=0.226  Sum_probs=72.7

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ..|+|||+..+..+..+..  ....+..++.+|.+..   ++.++.|+.+..+|+.-+ ++.+++.-|.    ..+..++
T Consensus       587 ~~vRiYdL~kqelvKkL~t--g~kwiS~msihp~GDn---li~gs~d~k~~WfDldlsskPyk~lr~H~----~avr~Va  657 (733)
T KOG0650|consen  587 RSVRIYDLSKQELVKKLLT--GSKWISSMSIHPNGDN---LILGSYDKKMCWFDLDLSSKPYKTLRLHE----KAVRSVA  657 (733)
T ss_pred             cceEEEehhHHHHHHHHhc--CCeeeeeeeecCCCCe---EEEecCCCeeEEEEcccCcchhHHhhhhh----hhhhhhh
Confidence            4699999998776444443  1223444667777777   889999999999999864 6788898888    8999999


Q ss_pred             EcCCCCEEEEecCCCeEEEc
Q psy17135         86 FHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iw  105 (106)
                      |++...++++|+.|+++.++
T Consensus       658 ~H~ryPLfas~sdDgtv~Vf  677 (733)
T KOG0650|consen  658 FHKRYPLFASGSDDGTVIVF  677 (733)
T ss_pred             hccccceeeeecCCCcEEEE
Confidence            99999999999999999876

>KOG1523|consensus

Probab=98.76  E-value=1.3e-07  Score=57.20  Aligned_cols=94  Identities=16%  Similarity=0.171  Sum_probs=72.2

Q ss_pred             CCceEEEEeCccCceeee-cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-cc--chheeccccccCCCC
Q psy17135          5 PSSVIYIWTLLELQTYAR-NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KT--CVQEITAHRKKFDES   80 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~--~~~~~~~~~~~~~~~   80 (106)
                      +...|.||.....++... .....|...+..+.|.|..+.   +++++.|....+|.... ++  +.-.+..+.    ..
T Consensus        30 ~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snr---Ivtcs~drnayVw~~~~~~~WkptlvLlRiN----rA  102 (361)
T KOG1523|consen   30 NNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNR---IVTCSHDRNAYVWTQPSGGTWKPTLVLLRIN----RA  102 (361)
T ss_pred             CCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCc---eeEccCCCCccccccCCCCeeccceeEEEec----cc
Confidence            456789999887774333 344456666777999999999   89999999999998843 33  333333344    68


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.++.|+|.++.+++|+..+.|.+|
T Consensus       103 At~V~WsP~enkFAVgSgar~isVc  127 (361)
T KOG1523|consen  103 ATCVKWSPKENKFAVGSGARLISVC  127 (361)
T ss_pred             eeeEeecCcCceEEeccCccEEEEE
Confidence            8999999999999999999988775

>KOG0650|consensus

Probab=98.74  E-value=7e-08  Score=62.50  Aligned_cols=62  Identities=21%  Similarity=0.366  Sum_probs=50.2

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE--EEEec
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF--IASAG   97 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~s~~   97 (106)
                      |.+.+.+++..|.+..   |++|+.||+|++|.+.+|.|++++.-.     +.|.+++|+|....  |+.+-
T Consensus       399 Htg~Vr~iSvdp~G~w---lasGsdDGtvriWEi~TgRcvr~~~~d-----~~I~~vaw~P~~~~~vLAvA~  462 (733)
T KOG0650|consen  399 HTGLVRSISVDPSGEW---LASGSDDGTVRIWEIATGRCVRTVQFD-----SEIRSVAWNPLSDLCVLAVAV  462 (733)
T ss_pred             cCCeEEEEEecCCcce---eeecCCCCcEEEEEeecceEEEEEeec-----ceeEEEEecCCCCceeEEEEe
Confidence            5666677777887777   899999999999999999999998755     58999999996553  44443

>KOG1188|consensus

Probab=98.74  E-value=1.4e-07  Score=57.38  Aligned_cols=97  Identities=13%  Similarity=0.130  Sum_probs=69.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~   80 (106)
                      ..+-.|.+||.+.-+...+.-...|++.+..+.|+|..+..  |+||+.||.|.+||++...   .+.+...+.    ..
T Consensus       140 ~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnl--LlSGSvDGLvnlfD~~~d~EeDaL~~viN~~----sS  213 (376)
T KOG1188|consen  140 RSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNL--LLSGSVDGLVNLFDTKKDNEEDALLHVINHG----SS  213 (376)
T ss_pred             cCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCe--EEeecccceEEeeecCCCcchhhHHHhhccc----ce
Confidence            35678999999986663344444577788999999998887  8999999999999997542   244444455    67


Q ss_pred             eEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      |..+.|.-.+ ..+..-+-..+..+|+
T Consensus       214 I~~igw~~~~ykrI~clTH~Etf~~~e  240 (376)
T KOG1188|consen  214 IHLIGWLSKKYKRIMCLTHMETFAIYE  240 (376)
T ss_pred             eeeeeeecCCcceEEEEEccCceeEEE
Confidence            8999997655 2355555566666653

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.73  E-value=1.5e-07  Score=60.68  Aligned_cols=69  Identities=19%  Similarity=0.205  Sum_probs=56.7

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+.++.++|....   ++.|+.||.|.+||...+..  +.....    -....++|+|++..++.|+..|.+.+||
T Consensus       259 ~s~v~~ca~sp~E~k---LvlGC~DgSiiLyD~~~~~t--~~~ka~----~~P~~iaWHp~gai~~V~s~qGelQ~FD  327 (545)
T PF11768_consen  259 PSQVICCARSPSEDK---LVLGCEDGSIILYDTTRGVT--LLAKAE----FIPTLIAWHPDGAIFVVGSEQGELQCFD  327 (545)
T ss_pred             CCcceEEecCcccce---EEEEecCCeEEEEEcCCCee--eeeeec----ccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence            456788999998888   89999999999999976632  222233    4678899999999999999999999997

>KOG1009|consensus

Probab=98.72  E-value=2.6e-08  Score=61.55  Aligned_cols=93  Identities=17%  Similarity=0.261  Sum_probs=74.9

Q ss_pred             cCCCceEEEEeCc--------c------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh
Q psy17135          3 KVPSSVIYIWTLL--------E------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ   68 (106)
Q Consensus         3 ~~~d~~i~iwd~~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~   68 (106)
                      ...+|.|.+|-..        +      ...+.......|...+..+.|.|.+..   +++++.|..+++||+..|+...
T Consensus        83 g~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~---l~s~s~dns~~l~Dv~~G~l~~  159 (434)
T KOG1009|consen   83 GGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNF---LVSGSVDNSVRLWDVHAGQLLA  159 (434)
T ss_pred             cCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCce---eeeeeccceEEEEEeccceeEe
Confidence            4568899999876        2      112223333346667888999999988   8999999999999999999999


Q ss_pred             eeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135         69 EITAHRKKFDESILDVAFHPSKPFIASAGADGLA  102 (106)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i  102 (106)
                      .+..|.    ..+..++|-|..+++++-+.|+..
T Consensus       160 ~~~dh~----~yvqgvawDpl~qyv~s~s~dr~~  189 (434)
T KOG1009|consen  160 ILDDHE----HYVQGVAWDPLNQYVASKSSDRHP  189 (434)
T ss_pred             eccccc----cccceeecchhhhhhhhhccCccc
Confidence            999998    899999999999999888877743

>KOG2111|consensus

Probab=98.71  E-value=4.5e-07  Score=54.82  Aligned_cols=95  Identities=21%  Similarity=0.273  Sum_probs=64.6

Q ss_pred             CceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCCeE
Q psy17135          6 SSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDESIL   82 (106)
Q Consensus         6 d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~v~   82 (106)
                      .+.|.+|... +.+.+..+.....  .-..|...|......+..-|-.-|.|++-|+...+.  ...+.+|.    ..|.
T Consensus       112 ~~~I~VytF~~n~k~l~~~et~~N--PkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~----s~Ia  185 (346)
T KOG2111|consen  112 ENKIYVYTFPDNPKLLHVIETRSN--PKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHD----SDIA  185 (346)
T ss_pred             cCeEEEEEcCCChhheeeeecccC--CCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEccc----Ccee
Confidence            3455555554 3343333333211  122466666666655545566779999999876543  46778898    8999


Q ss_pred             EEEEcCCCCEEEEecCCCe-EEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGL-AKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~-i~iwd  106 (106)
                      |++++.+|..+||+|..|+ |||||
T Consensus       186 cv~Ln~~Gt~vATaStkGTLIRIFd  210 (346)
T KOG2111|consen  186 CVALNLQGTLVATASTKGTLIRIFD  210 (346)
T ss_pred             EEEEcCCccEEEEeccCcEEEEEEE
Confidence            9999999999999999998 78875

>KOG1587|consensus

Probab=98.69  E-value=7.6e-08  Score=62.71  Aligned_cols=96  Identities=15%  Similarity=0.194  Sum_probs=71.7

Q ss_pred             cCCCceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~   79 (106)
                      ...|-+++||... ...++..+..  +......+.|+|.....  |+++..+|.+.+||+....  ++.......    .
T Consensus       416 s~gDW~vriWs~~~~~~Pl~~~~~--~~~~v~~vaWSptrpav--F~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~----~  487 (555)
T KOG1587|consen  416 SVGDWTVRIWSEDVIASPLLSLDS--SPDYVTDVAWSPTRPAV--FATVDGDGNLDIWDLLQDDEEPVLSQKVCS----P  487 (555)
T ss_pred             eeccceeEeccccCCCCcchhhhh--ccceeeeeEEcCcCceE--EEEEcCCCceehhhhhccccCCcccccccc----c
Confidence            3458899999998 5555333333  34446779999987765  7899999999999998653  344443333    5


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.+.++++++.++.|...|++++++
T Consensus       488 ~l~~~~~s~~g~~lavGd~~G~~~~~~  514 (555)
T KOG1587|consen  488 ALTRVRWSPNGKLLAVGDANGTTHILK  514 (555)
T ss_pred             ccceeecCCCCcEEEEecCCCcEEEEE
Confidence            677888999999999999999998874

>KOG0322|consensus

Probab=98.67  E-value=2.9e-07  Score=54.57  Aligned_cols=97  Identities=19%  Similarity=0.262  Sum_probs=67.1

Q ss_pred             cCCCceEEEEeCccCceeeeccc--------CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cc-hh-ee
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDC--------PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TC-VQ-EI   70 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~-~~-~~   70 (106)
                      ...+|.+.+||+.++..+..++.        ..|...+.++.|-+....+   ++|+.+..+-.|+++..  .+ ++ .+
T Consensus       171 GyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rG---isgga~dkl~~~Sl~~s~gslq~~~e~  247 (323)
T KOG0322|consen  171 GYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRG---ISGGADDKLVMYSLNHSTGSLQIRKEI  247 (323)
T ss_pred             eccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCC---cCCCccccceeeeeccccCcccccceE
Confidence            35689999999998743222211        1134456667777766665   66777778888987743  21 11 22


Q ss_pred             ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         71 TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        71 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .-..    .++..+.+.||++++|+++.|++||+|.
T Consensus       248 ~lkn----pGv~gvrIRpD~KIlATAGWD~RiRVys  279 (323)
T KOG0322|consen  248 TLKN----PGVSGVRIRPDGKILATAGWDHRIRVYS  279 (323)
T ss_pred             EecC----CCccceEEccCCcEEeecccCCcEEEEE
Confidence            2222    6889999999999999999999999973

>KOG2919|consensus

Probab=98.66  E-value=1.5e-07  Score=57.12  Aligned_cols=90  Identities=13%  Similarity=0.199  Sum_probs=61.7

Q ss_pred             CCceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~   82 (106)
                      .|..|..||++.. .++..+..  |....+.-.+......+.+|++|+.+|.|++||+++ +.....+..+.    .-++
T Consensus       271 k~dkIl~WDiR~~~~pv~~L~r--hv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~s----d~vN  344 (406)
T KOG2919|consen  271 KDDKILCWDIRYSRDPVYALER--HVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYS----DTVN  344 (406)
T ss_pred             CCCeEEEEeehhccchhhhhhh--hccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccc----cccc
Confidence            4778999999863 33333333  232233322333333444489999999999999998 66666677777    8899


Q ss_pred             EEEEcCCCCEEEEecCCC
Q psy17135         83 DVAFHPSKPFIASAGADG  100 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~  100 (106)
                      .++++|--.++++++..+
T Consensus       345 gvslnP~mpilatssGqr  362 (406)
T KOG2919|consen  345 GVSLNPIMPILATSSGQR  362 (406)
T ss_pred             ceecCcccceeeeccCce
Confidence            999999888888877443

>KOG1538|consensus

Probab=98.63  E-value=1.6e-07  Score=61.98  Aligned_cols=67  Identities=15%  Similarity=0.215  Sum_probs=58.4

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +..+.|-|++...   +.+. +..+.+||...|..+.++.+|.    +-|.+++|+.+|..++||+.|..|.+|.
T Consensus        15 i~d~afkPDGsqL---~lAA-g~rlliyD~ndG~llqtLKgHK----DtVycVAys~dGkrFASG~aDK~VI~W~   81 (1081)
T KOG1538|consen   15 INDIAFKPDGTQL---ILAA-GSRLLVYDTSDGTLLQPLKGHK----DTVYCVAYAKDGKRFASGSADKSVIIWT   81 (1081)
T ss_pred             hheeEECCCCceE---EEec-CCEEEEEeCCCccccccccccc----ceEEEEEEccCCceeccCCCceeEEEec
Confidence            6678899998884   3333 2368999999999999999999    8999999999999999999999999994

>KOG2139|consensus

Probab=98.63  E-value=9.4e-07  Score=54.51  Aligned_cols=69  Identities=14%  Similarity=0.200  Sum_probs=55.6

Q ss_pred             CCCCeeEeeeCCCCceEEEeeCC-CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGH-DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..+..+.|.+++..   +++++. +..+.+||..++..+.-.....    +++.-+.||||+.+++++..|+..++|
T Consensus       196 ~pVtsmqwn~dgt~---l~tAS~gsssi~iWdpdtg~~~pL~~~gl----gg~slLkwSPdgd~lfaAt~davfrlw  265 (445)
T KOG2139|consen  196 NPVTSMQWNEDGTI---LVTASFGSSSIMIWDPDTGQKIPLIPKGL----GGFSLLKWSPDGDVLFAATCDAVFRLW  265 (445)
T ss_pred             ceeeEEEEcCCCCE---EeecccCcceEEEEcCCCCCcccccccCC----CceeeEEEcCCCCEEEEecccceeeee
Confidence            34667889888777   677655 4669999999987655553344    788999999999999999999999999

>KOG2695|consensus

Probab=98.61  E-value=1.3e-07  Score=57.88  Aligned_cols=97  Identities=16%  Similarity=0.168  Sum_probs=65.6

Q ss_pred             CCceEEEEeCccCce--eeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccc---hheeccccccCC
Q psy17135          5 PSSVIYIWTLLELQT--YARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAHRKKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~   78 (106)
                      ++|.|..+|++....  ..+...--|.+.+.++.... .++.   |++.+++|+|++||.+.-++   +.++.+|...  
T Consensus       272 RngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~---LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~--  346 (425)
T KOG2695|consen  272 RNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQK---LMASDMTGKIKLYDLRATKCKKSVMQYEGHVNL--  346 (425)
T ss_pred             cCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccce---EeeccCcCceeEeeehhhhcccceeeeeccccc--
Confidence            578899999986521  01122222444455555555 3334   78899999999999998777   7788888732  


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..-.-+...+.+..+++++.|...++|.
T Consensus       347 ~a~l~~~v~~eeg~I~s~GdDcytRiWs  374 (425)
T KOG2695|consen  347 SAYLPAHVKEEEGSIFSVGDDCYTRIWS  374 (425)
T ss_pred             ccccccccccccceEEEccCeeEEEEEe
Confidence            1222334567777899999999999994

>KOG1523|consensus

Probab=98.60  E-value=2e-07  Score=56.42  Aligned_cols=98  Identities=15%  Similarity=0.199  Sum_probs=70.8

Q ss_pred             CcCCCceEEEEeC-ccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hheeccccccC
Q psy17135          2 QKVPSSVIYIWTL-LELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEITAHRKKF   77 (106)
Q Consensus         2 ~~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~   77 (106)
                      ++.-|.--++|.. ..++....+....++....++.|.|.++.   +++|+..+.|.+|=++....   .+++..+-   
T Consensus        72 tcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enk---FAVgSgar~isVcy~E~ENdWWVsKhikkPi---  145 (361)
T KOG1523|consen   72 TCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENK---FAVGSGARLISVCYYEQENDWWVSKHIKKPI---  145 (361)
T ss_pred             EccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCce---EEeccCccEEEEEEEecccceehhhhhCCcc---
Confidence            3455666678887 33433334444446777888999999999   89999999999986654331   22232221   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +..|.+++|+|+.-.+++|+.|+..++|
T Consensus       146 rStv~sldWhpnnVLlaaGs~D~k~rVf  173 (361)
T KOG1523|consen  146 RSTVTSLDWHPNNVLLAAGSTDGKCRVF  173 (361)
T ss_pred             ccceeeeeccCCcceecccccCcceeEE
Confidence            2789999999999999999999999987

>KOG2919|consensus

Probab=98.60  E-value=5.4e-07  Score=54.83  Aligned_cols=96  Identities=8%  Similarity=0.012  Sum_probs=71.3

Q ss_pred             CCceEEEEeCc-cCceeeecccCC----C-CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135          5 PSSVIYIWTLL-ELQTYARNDCPE----L-NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~-~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      ...+|+++|+. .|.--.......    . .+.+.+..++|.....  ++.++....+-|+......++..+.+|.    
T Consensus       177 ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~--~a~gsY~q~~giy~~~~~~pl~llggh~----  250 (406)
T KOG2919|consen  177 YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKT--LAVGSYGQRVGIYNDDGRRPLQLLGGHG----  250 (406)
T ss_pred             ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcc--eeeecccceeeeEecCCCCceeeecccC----
Confidence            35679999994 433222221111    1 2233447788887754  7889999999999888888899998898    


Q ss_pred             CCeEEEEEcCCCCEEEEecC-CCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGA-DGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~-d~~i~iwd  106 (106)
                      ++|+.+.|.++|+.+++|.+ +..|..||
T Consensus       251 gGvThL~~~edGn~lfsGaRk~dkIl~WD  279 (406)
T KOG2919|consen  251 GGVTHLQWCEDGNKLFSGARKDDKILCWD  279 (406)
T ss_pred             CCeeeEEeccCcCeecccccCCCeEEEEe
Confidence            89999999999999999885 56788886

>KOG1063|consensus

Probab=98.60  E-value=2e-07  Score=61.12  Aligned_cols=70  Identities=27%  Similarity=0.407  Sum_probs=57.2

Q ss_pred             CCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      -.+.++..+|.++.   ++|++..     ..|++|+..+-...+.+..|.    -.|+.++||||+++|++.|+|+++.+
T Consensus       526 yEv~~l~~s~~gnl---iASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs----LTVT~l~FSpdg~~LLsvsRDRt~sl  598 (764)
T KOG1063|consen  526 YEVYALAISPTGNL---IASACKSSLKEHAVIRLWNTANWLQVQELEGHS----LTVTRLAFSPDGRYLLSVSRDRTVSL  598 (764)
T ss_pred             eeEEEEEecCCCCE---EeehhhhCCccceEEEEEeccchhhhheecccc----eEEEEEEECCCCcEEEEeecCceEEe
Confidence            34555666666666   7887544     348899998888888899998    89999999999999999999999998


Q ss_pred             cC
Q psy17135        105 FV  106 (106)
Q Consensus       105 wd  106 (106)
                      |.
T Consensus       599 ~~  600 (764)
T KOG1063|consen  599 YE  600 (764)
T ss_pred             ee
Confidence            84

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.57  E-value=4.9e-07  Score=56.68  Aligned_cols=93  Identities=16%  Similarity=0.149  Sum_probs=65.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...++.|.+.|..+.+.+..+...  . .... ..+.|++..   +..++.|+.|.++|+.+.+.++++..-     ...
T Consensus        12 ~~~~~~v~viD~~t~~~~~~i~~~--~-~~h~~~~~s~Dgr~---~yv~~rdg~vsviD~~~~~~v~~i~~G-----~~~   80 (369)
T PF02239_consen   12 ERGSGSVAVIDGATNKVVARIPTG--G-APHAGLKFSPDGRY---LYVANRDGTVSVIDLATGKVVATIKVG-----GNP   80 (369)
T ss_dssp             EGGGTEEEEEETTT-SEEEEEE-S--T-TEEEEEE-TT-SSE---EEEEETTSEEEEEETTSSSEEEEEE-S-----SEE
T ss_pred             ecCCCEEEEEECCCCeEEEEEcCC--C-CceeEEEecCCCCE---EEEEcCCCeEEEEECCcccEEEEEecC-----CCc
Confidence            457899999999999987777652  1 2222 456677776   566678999999999999988888754     367


Q ss_pred             EEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                      ..++++++|+++++++ .++.+.++|
T Consensus        81 ~~i~~s~DG~~~~v~n~~~~~v~v~D  106 (369)
T PF02239_consen   81 RGIAVSPDGKYVYVANYEPGTVSVID  106 (369)
T ss_dssp             EEEEE--TTTEEEEEEEETTEEEEEE
T ss_pred             ceEEEcCCCCEEEEEecCCCceeEec
Confidence            8899999999977665 677887765

...

>KOG2139|consensus

Probab=98.53  E-value=2.5e-06  Score=52.73  Aligned_cols=89  Identities=18%  Similarity=0.181  Sum_probs=63.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC-CccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD-NKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~v   81 (106)
                      +..|..|.|||..++..+...  ...-.++..+.|+|++..   +.++..|+..++|... +....+...+.     +.|
T Consensus       214 S~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSPdgd~---lfaAt~davfrlw~e~q~wt~erw~lgs-----grv  283 (445)
T KOG2139|consen  214 SFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSPDGDV---LFAATCDAVFRLWQENQSWTKERWILGS-----GRV  283 (445)
T ss_pred             ccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcCCCCE---EEEecccceeeeehhcccceecceeccC-----Cce
Confidence            345778999999998874333  222345667999999998   8889999999999554 34445544433     588


Q ss_pred             EEEEEcCCCCE-EEEecCCCe
Q psy17135         82 LDVAFHPSKPF-IASAGADGL  101 (106)
Q Consensus        82 ~~~~~~~~~~~-~~s~~~d~~  101 (106)
                      ....|+|+|.. +++++....
T Consensus       284 qtacWspcGsfLLf~~sgsp~  304 (445)
T KOG2139|consen  284 QTACWSPCGSFLLFACSGSPR  304 (445)
T ss_pred             eeeeecCCCCEEEEEEcCCce
Confidence            88899999987 455554433

>KOG1517|consensus

Probab=98.49  E-value=1.1e-06  Score=60.57  Aligned_cols=100  Identities=18%  Similarity=0.178  Sum_probs=66.0

Q ss_pred             CCcCCCceEEEEeCcc-----Cceeeecc---cCCCC-CCC-CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135          1 MQKVPSSVIYIWTLLE-----LQTYARND---CPELN-SEP-PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI   70 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~-----~~~~~~~~---~~~~~-~~~-~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~   70 (106)
                      |+...||.|+||+--.     .+.+....   .+... .+. ....|......   |++++.-..|+|||....+.++.+
T Consensus      1127 Ltas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~---Ll~tGd~r~IRIWDa~~E~~~~di 1203 (1387)
T KOG1517|consen 1127 LTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGH---LLVTGDVRSIRIWDAHKEQVVADI 1203 (1387)
T ss_pred             eeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCe---EEecCCeeEEEEEecccceeEeec
Confidence            4678899999998432     22222111   11111 112 33566666666   566666889999999988888777


Q ss_pred             ccccccCCCCeEEEEEc-CCCCEEEEecCCCeEEEcC
Q psy17135         71 TAHRKKFDESILDVAFH-PSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        71 ~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~i~iwd  106 (106)
                      .....   ..++++.-+ +.|..+++|..||.+++||
T Consensus      1204 P~~s~---t~vTaLS~~~~~gn~i~AGfaDGsvRvyD 1237 (1387)
T KOG1517|consen 1204 PYGSS---TLVTALSADLVHGNIIAAGFADGSVRVYD 1237 (1387)
T ss_pred             ccCCC---ccceeecccccCCceEEEeecCCceEEee
Confidence            65542   566666543 3678999999999999997

>KOG1538|consensus

Probab=98.49  E-value=1.7e-06  Score=57.35  Aligned_cols=95  Identities=9%  Similarity=0.120  Sum_probs=68.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh--------ee--cc--
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ--------EI--TA--   72 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~--------~~--~~--   72 (106)
                      ++..+.+||...|..+..++.  |.+-+.++.|+.++..   +++|+.|..|-+|..+-.-.++        ..  +.  
T Consensus        31 Ag~rlliyD~ndG~llqtLKg--HKDtVycVAys~dGkr---FASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~  105 (1081)
T KOG1538|consen   31 AGSRLLVYDTSDGTLLQPLKG--HKDTVYCVAYAKDGKR---FASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPIT  105 (1081)
T ss_pred             cCCEEEEEeCCCccccccccc--ccceEEEEEEccCCce---eccCCCceeEEEecccccceeeeccCCeeeEeecCchH
Confidence            456789999999999777766  4555778999999988   8999999999999865321111        00  00  


Q ss_pred             c---------------------cccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         73 H---------------------RKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        73 ~---------------------~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      |                     ..+...++.+.+|.-||.+++-|-.+|+|.+
T Consensus       106 h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsi  158 (1081)
T KOG1538|consen  106 HQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISI  158 (1081)
T ss_pred             HHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEe
Confidence            0                     0012356778888889999999999998876

>KOG4547|consensus

Probab=98.45  E-value=3.9e-06  Score=54.15  Aligned_cols=95  Identities=9%  Similarity=0.085  Sum_probs=78.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..+-|.|.+|+...++.-..+....|...+..+.+...-..   +.+++.|+.+..|+...++.++.+....    ..+.
T Consensus        76 gt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~c---iyS~~ad~~v~~~~~~~~~~~~~~~~~~----~~~~  148 (541)
T KOG4547|consen   76 GTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGC---IYSVGADLKVVYILEKEKVIIRIWKEQK----PLVS  148 (541)
T ss_pred             ecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCc---eEecCCceeEEEEecccceeeeeeccCC----Cccc
Confidence            45789999999999998777776666766777777776666   7999999999999999999888888877    7889


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.++||+..+++++  +.|++||
T Consensus       149 sl~is~D~~~l~~as--~~ik~~~  170 (541)
T KOG4547|consen  149 SLCISPDGKILLTAS--RQIKVLD  170 (541)
T ss_pred             eEEEcCCCCEEEecc--ceEEEEE
Confidence            999999999998876  4566554

>smart00320 WD40 WD40 repeats

Probab=98.45  E-value=1.1e-06  Score=36.10  Aligned_cols=37  Identities=30%  Similarity=0.556  Sum_probs=31.2

Q ss_pred             chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +...+..|.    ..+.++.|++.+..+++++.|+.+++|+
T Consensus         4 ~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        4 LLKTLKGHT----GPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEecC----CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            344555566    7899999999889999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2321|consensus

Probab=98.45  E-value=2.2e-06  Score=55.69  Aligned_cols=94  Identities=14%  Similarity=0.185  Sum_probs=69.5

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc------ccc-cCCCC
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA------HRK-KFDES   80 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~------~~~-~~~~~   80 (106)
                      .|+=.|+..|.-+.++...  ......+..++....   +++|+.+|.|..||.+....+..+..      ++. .....
T Consensus       156 evYRlNLEqGrfL~P~~~~--~~~lN~v~in~~hgL---la~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~s  230 (703)
T KOG2321|consen  156 EVYRLNLEQGRFLNPFETD--SGELNVVSINEEHGL---LACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPS  230 (703)
T ss_pred             ceEEEEccccccccccccc--cccceeeeecCccce---EEecccCceEEEecchhhhhheeeecccccCCCccccccCc
Confidence            3555677777776666663  344666777777766   89999999999999998766555432      221 11245


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |++++|+-+|-.++.|..+|.+.|||
T Consensus       231 vTal~F~d~gL~~aVGts~G~v~iyD  256 (703)
T KOG2321|consen  231 VTALKFRDDGLHVAVGTSTGSVLIYD  256 (703)
T ss_pred             ceEEEecCCceeEEeeccCCcEEEEE
Confidence            99999999999999999999999986

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.44  E-value=3.1e-06  Score=54.08  Aligned_cols=90  Identities=12%  Similarity=0.132  Sum_probs=57.6

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe-eCCCCcEEEe--eCCCccchheeccccccCCCCeE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR-PGHDCSIRLW--NLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      +..|.+||+.+++........   .......|+|++..   ++. .+.++...+|  |+.++. ...+..+.    ..+.
T Consensus       227 ~~~i~i~dl~tg~~~~l~~~~---g~~~~~~wSPDG~~---La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~----~~~~  295 (429)
T PRK01742        227 KSQLVVHDLRSGARKVVASFR---GHNGAPAFSPDGSR---LAFASSKDGVLNIYVMGANGGT-PSQLTSGA----GNNT  295 (429)
T ss_pred             CcEEEEEeCCCCceEEEecCC---CccCceeECCCCCE---EEEEEecCCcEEEEEEECCCCC-eEeeccCC----CCcC
Confidence            457999999887642222221   12335789998887   444 4567776665  555554 44555555    5677


Q ss_pred             EEEEcCCCCEEE-EecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIA-SAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~-s~~~d~~i~iwd  106 (106)
                      ...|+|++..++ ++..++...+|+
T Consensus       296 ~~~wSpDG~~i~f~s~~~g~~~I~~  320 (429)
T PRK01742        296 EPSWSPDGQSILFTSDRSGSPQVYR  320 (429)
T ss_pred             CEEECCCCCEEEEEECCCCCceEEE
Confidence            899999999755 455677777763

>KOG1963|consensus

Probab=98.42  E-value=3.7e-06  Score=56.40  Aligned_cols=92  Identities=12%  Similarity=0.167  Sum_probs=71.3

Q ss_pred             CCceEEEEeCcc--CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLE--LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      -||.|.+|.-..  +........+.|+..+.++.|++.+.+   +.+|+.++.+-+|.+.+++  +++-..-   .+.|.
T Consensus       225 ~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~---LlSGG~E~VLv~Wq~~T~~--kqfLPRL---gs~I~  296 (792)
T KOG1963|consen  225 SDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAY---LLSGGREGVLVLWQLETGK--KQFLPRL---GSPIL  296 (792)
T ss_pred             cCCcEEEEeccccccccccceEEEecccccceeEEecCCce---EeecccceEEEEEeecCCC--ccccccc---CCeeE
Confidence            478999997543  333223333346778899999999999   8999999999999999887  4443333   27899


Q ss_pred             EEEEcCCCCEEEEecCCCeEEE
Q psy17135         83 DVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      .+.++||+...+....|..|.+
T Consensus       297 ~i~vS~ds~~~sl~~~DNqI~l  318 (792)
T KOG1963|consen  297 HIVVSPDSDLYSLVLEDNQIHL  318 (792)
T ss_pred             EEEEcCCCCeEEEEecCceEEE
Confidence            9999999999999999998865

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.42  E-value=6.6e-06  Score=50.72  Aligned_cols=97  Identities=13%  Similarity=0.095  Sum_probs=60.2

Q ss_pred             CCceEEEEeCccCcee-eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-----eccccccCC
Q psy17135          5 PSSVIYIWTLLELQTY-ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-----ITAHRKKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-----~~~~~~~~~   78 (106)
                      .++.|.+|++.+...+ .......+......+.+.|.+...  +++...++.|.+||+++...+..     ......   
T Consensus       100 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l--~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g---  174 (330)
T PRK11028        100 NANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTL--WVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEG---  174 (330)
T ss_pred             CCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEE--EEeeCCCCEEEEEEECCCCcccccCCCceecCCC---
Confidence            4788999999743211 111111112234566788877663  46667779999999976332211     111121   


Q ss_pred             CCeEEEEEcCCCCEEEEecC-CCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGA-DGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~-d~~i~iwd  106 (106)
                      .....+.|+|++++++++.. ++++.+|+
T Consensus       175 ~~p~~~~~~pdg~~lyv~~~~~~~v~v~~  203 (330)
T PRK11028        175 AGPRHMVFHPNQQYAYCVNELNSSVDVWQ  203 (330)
T ss_pred             CCCceEEECCCCCEEEEEecCCCEEEEEE
Confidence            45677899999999877765 88888875

>KOG4227|consensus

Probab=98.42  E-value=4e-06  Score=52.48  Aligned_cols=98  Identities=7%  Similarity=-0.023  Sum_probs=72.8

Q ss_pred             cCCCceEEEEeCcc------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135          3 KVPSSVIYIWTLLE------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~   76 (106)
                      ...|-.+++|++..      .+++. +..++|.+.+.++.|......   +.+|..+++|-.-|+.+.+.+..+. |.. 
T Consensus        74 GGDD~~~~~W~~de~~~~k~~KPI~-~~~~~H~SNIF~L~F~~~N~~---~~SG~~~~~VI~HDiEt~qsi~V~~-~~~-  147 (609)
T KOG4227|consen   74 GGDDMHGRVWNVDELMVRKTPKPIG-VMEHPHRSNIFSLEFDLENRF---LYSGERWGTVIKHDIETKQSIYVAN-ENN-  147 (609)
T ss_pred             cCCcceeeeechHHHHhhcCCCCce-eccCccccceEEEEEccCCee---EecCCCcceeEeeecccceeeeeec-ccC-
Confidence            34677899999863      23211 222334466777777776666   8999999999999999888766554 321 


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++.|+.+.-+|..+.+++.+.++.|.+||
T Consensus       148 ~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D  177 (609)
T KOG4227|consen  148 NRGDVYHMDQHPTDNTLIVVTRAKLVSFID  177 (609)
T ss_pred             cccceeecccCCCCceEEEEecCceEEEEe
Confidence            126899999999989999999999999997

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.41  E-value=2.8e-07  Score=39.13  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=26.7

Q ss_pred             CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEee
Q psy17135         27 ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWN   60 (106)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd   60 (106)
                      .|...+..+.|.|.+..   +++++.|+.|++||
T Consensus         9 ~h~~~i~~i~~~~~~~~---~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    9 GHSSSINSIAWSPDGNF---LASGSSDGTIRVWD   39 (39)
T ss_dssp             SSSSSEEEEEEETTSSE---EEEEETTSEEEEEE
T ss_pred             CCCCcEEEEEEeccccc---ceeeCCCCEEEEEC
Confidence            35667888999999777   89999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG4497|consensus

Probab=98.41  E-value=3.5e-06  Score=51.63  Aligned_cols=85  Identities=19%  Similarity=0.291  Sum_probs=65.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .|+.|.+|++...+-  ..+.+....+.....|+|++...  +.+...+-.+.+|++.+.+.. .++ |++   ..+..+
T Consensus        69 k~~~vqvwsl~Qpew--~ckIdeg~agls~~~WSPdgrhi--L~tseF~lriTVWSL~t~~~~-~~~-~pK---~~~kg~  139 (447)
T KOG4497|consen   69 KDPKVQVWSLVQPEW--YCKIDEGQAGLSSISWSPDGRHI--LLTSEFDLRITVWSLNTQKGY-LLP-HPK---TNVKGY  139 (447)
T ss_pred             ccceEEEEEeeccee--EEEeccCCCcceeeeECCCcceE--eeeecceeEEEEEEeccceeE-Eec-ccc---cCceeE
Confidence            478899999987666  55555567778889999999775  778899999999999877643 233 332   567889


Q ss_pred             EEcCCCCEEEEecC
Q psy17135         85 AFHPSKPFIASAGA   98 (106)
Q Consensus        85 ~~~~~~~~~~s~~~   98 (106)
                      +|+|++++.+-+++
T Consensus       140 ~f~~dg~f~ai~sR  153 (447)
T KOG4497|consen  140 AFHPDGQFCAILSR  153 (447)
T ss_pred             EECCCCceeeeeec
Confidence            99999998776654

>KOG0644|consensus

Probab=98.41  E-value=1.6e-07  Score=63.02  Aligned_cols=72  Identities=17%  Similarity=0.310  Sum_probs=63.0

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |...+.++.+...+.+   +.+|+.|..++||...++.++....+|.    ..++.++.+-+...+++++.|..|++|.
T Consensus       189 H~naVyca~fDrtg~~---Iitgsdd~lvKiwS~et~~~lAs~rGhs----~ditdlavs~~n~~iaaaS~D~vIrvWr  260 (1113)
T KOG0644|consen  189 HRNAVYCAIFDRTGRY---IITGSDDRLVKIWSMETARCLASCRGHS----GDITDLAVSSNNTMIAAASNDKVIRVWR  260 (1113)
T ss_pred             hhhheeeeeeccccce---EeecCccceeeeeeccchhhhccCCCCc----cccchhccchhhhhhhhcccCceEEEEe
Confidence            4444566667777777   8999999999999999999999999999    8999999998888899999999999994

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.35  E-value=9.5e-06  Score=51.89  Aligned_cols=89  Identities=11%  Similarity=0.066  Sum_probs=56.6

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---CCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---DCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      +..|.+||...... ..+..  +........|+|.+..   ++..+.   +..+.+||+.+++.. .+....    ....
T Consensus       183 ~~~i~i~d~dg~~~-~~lt~--~~~~v~~p~wSPDG~~---la~~s~~~~~~~i~i~dl~tg~~~-~l~~~~----g~~~  251 (429)
T PRK01742        183 PYEVRVADYDGFNQ-FIVNR--SSQPLMSPAWSPDGSK---LAYVSFENKKSQLVVHDLRSGARK-VVASFR----GHNG  251 (429)
T ss_pred             eEEEEEECCCCCCc-eEecc--CCCccccceEcCCCCE---EEEEEecCCCcEEEEEeCCCCceE-EEecCC----CccC
Confidence            57899999876543 22222  2334667899999988   444432   346999999877532 122122    2334


Q ss_pred             EEEEcCCCCEEEEe-cCCCeEEEc
Q psy17135         83 DVAFHPSKPFIASA-GADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~~~~~~s~-~~d~~i~iw  105 (106)
                      ..+|+|+++.++.+ +.++.+.||
T Consensus       252 ~~~wSPDG~~La~~~~~~g~~~Iy  275 (429)
T PRK01742        252 APAFSPDGSRLAFASSKDGVLNIY  275 (429)
T ss_pred             ceeECCCCCEEEEEEecCCcEEEE
Confidence            67999999987765 467766665

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.34  E-value=1.5e-05  Score=49.15  Aligned_cols=93  Identities=13%  Similarity=0.067  Sum_probs=58.3

Q ss_pred             CCCceEEEEeCcc-Cce--eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccc--hheeccccccC
Q psy17135          4 VPSSVIYIWTLLE-LQT--YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTC--VQEITAHRKKF   77 (106)
Q Consensus         4 ~~d~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~--~~~~~~~~~~~   77 (106)
                      ..++.|++||+.+ ++.  +..+..   ......+.++|.+...  ++++..++.|.+|+++. ++.  ..... ..   
T Consensus         9 ~~~~~I~~~~~~~~g~l~~~~~~~~---~~~~~~l~~spd~~~l--yv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~---   79 (330)
T PRK11028          9 PESQQIHVWNLNHEGALTLLQVVDV---PGQVQPMVISPDKRHL--YVGVRPEFRVLSYRIADDGALTFAAESP-LP---   79 (330)
T ss_pred             CCCCCEEEEEECCCCceeeeeEEec---CCCCccEEECCCCCEE--EEEECCCCcEEEEEECCCCceEEeeeec-CC---
Confidence            4589999999964 332  222221   2345567788877662  24445678899999863 332  22221 22   


Q ss_pred             CCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                       .....+.++|+++.+++++ .++.+.+|+
T Consensus        80 -~~p~~i~~~~~g~~l~v~~~~~~~v~v~~  108 (330)
T PRK11028         80 -GSPTHISTDHQGRFLFSASYNANCVSVSP  108 (330)
T ss_pred             -CCceEEEECCCCCEEEEEEcCCCeEEEEE
Confidence             3567899999999877665 467777774

>KOG1334|consensus

Probab=98.33  E-value=1.4e-06  Score=55.45  Aligned_cols=63  Identities=21%  Similarity=0.293  Sum_probs=55.7

Q ss_pred             eeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         37 TIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        37 ~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |-|..++   +++|+.-|.|++|+-.+++.++-+.+..    .-|+|+.-+|--.+||+++-|..|+||-
T Consensus       402 fGPrsEy---VvSGSDCGhIFiW~K~t~eii~~MegDr----~VVNCLEpHP~~PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  402 FGPRSEY---VVSGSDCGHIFIWDKKTGEIIRFMEGDR----HVVNCLEPHPHLPVLASSGIDHDVKIWT  464 (559)
T ss_pred             ccCccce---EEecCccceEEEEecchhHHHHHhhccc----ceEeccCCCCCCchhhccCCccceeeec
Confidence            3455555   8999999999999999999999998887    6899999999999999999999999993

>KOG2315|consensus

Probab=98.33  E-value=9.4e-06  Score=52.42  Aligned_cols=88  Identities=17%  Similarity=0.279  Sum_probs=60.5

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH   87 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~   87 (106)
                      ++.|+|++ +..  .+...  .+..+++.|+|.++...+..=|.--|.+-+||+.+.+++..+.+.      ..+-+.|+
T Consensus       295 kvtifnlr-~~~--v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~------~tt~~eW~  363 (566)
T KOG2315|consen  295 KVTIFNLR-GKP--VFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA------NTTVFEWS  363 (566)
T ss_pred             eEEEEcCC-CCE--eEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccC------CceEEEEc
Confidence            46677775 333  34442  344677889999998533222344588999999998887777644      44667999


Q ss_pred             CCCCEEEEecC------CCeEEEcC
Q psy17135         88 PSKPFIASAGA------DGLAKVFV  106 (106)
Q Consensus        88 ~~~~~~~s~~~------d~~i~iwd  106 (106)
                      |||.++.++..      |..++||+
T Consensus       364 PdGe~flTATTaPRlrvdNg~Kiwh  388 (566)
T KOG2315|consen  364 PDGEYFLTATTAPRLRVDNGIKIWH  388 (566)
T ss_pred             CCCcEEEEEeccccEEecCCeEEEE
Confidence            99999988774      45677774

>KOG4547|consensus

Probab=98.28  E-value=1.2e-05  Score=51.97  Aligned_cols=92  Identities=14%  Similarity=0.101  Sum_probs=69.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..+|..+..|+.++...+..+...  +....++...|++..   +++++  +++++||+++++.+.++.+|.    ..|.
T Consensus       120 ~~ad~~v~~~~~~~~~~~~~~~~~--~~~~~sl~is~D~~~---l~~as--~~ik~~~~~~kevv~~ftgh~----s~v~  188 (541)
T KOG4547|consen  120 VGADLKVVYILEKEKVIIRIWKEQ--KPLVSSLCISPDGKI---LLTAS--RQIKVLDIETKEVVITFTGHG----SPVR  188 (541)
T ss_pred             cCCceeEEEEecccceeeeeeccC--CCccceEEEcCCCCE---EEecc--ceEEEEEccCceEEEEecCCC----cceE
Confidence            467899999999998886666664  334556777887666   67777  689999999999999999999    8999


Q ss_pred             EEEEcCC-----CCEEEE-ecCCCeEEEc
Q psy17135         83 DVAFHPS-----KPFIAS-AGADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~-----~~~~~s-~~~d~~i~iw  105 (106)
                      ++.|-.+     |.++.+ ...+..+.+|
T Consensus       189 t~~f~~~~~g~~G~~vLssa~~~r~i~~w  217 (541)
T KOG4547|consen  189 TLSFTTLIDGIIGKYVLSSAAAERGITVW  217 (541)
T ss_pred             EEEEEEeccccccceeeeccccccceeEE
Confidence            9998765     555444 4444445444

>KOG1240|consensus

Probab=98.26  E-value=2e-05  Score=55.29  Aligned_cols=102  Identities=12%  Similarity=0.124  Sum_probs=66.4

Q ss_pred             CcCCCceEEEEeCccCcee----e-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--c-----chhe
Q psy17135          2 QKVPSSVIYIWTLLELQTY----A-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--T-----CVQE   69 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~-----~~~~   69 (106)
                      +.+.||+|++||++....-    . .....-..+.+..+...+.+..   ++.++.||.|++.+++..  .     +.+.
T Consensus      1066 sgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~---~Av~t~DG~v~~~~id~~~~~~~~~~~~ri 1142 (1431)
T KOG1240|consen 1066 SGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ---FAVSTKDGSVRVLRIDHYNVSKRVATQVRI 1142 (1431)
T ss_pred             EecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe---EEEEcCCCeEEEEEccccccccceeeeeec
Confidence            5678999999999752210    0 1111112334445666666666   788899999999887641  1     0000


Q ss_pred             ec--------------ccc------------------------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         70 IT--------------AHR------------------------------KKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        70 ~~--------------~~~------------------------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..              .+.                              ....+.|++++.+|.+.+++.|...|.+.+|
T Consensus      1143 ~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lW 1222 (1431)
T KOG1240|consen 1143 PNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLW 1222 (1431)
T ss_pred             ccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEE
Confidence            00              000                              0134689999999999999999999999999


Q ss_pred             C
Q psy17135        106 V  106 (106)
Q Consensus       106 d  106 (106)
                      |
T Consensus      1223 D 1223 (1431)
T KOG1240|consen 1223 D 1223 (1431)
T ss_pred             E
Confidence            7

>KOG1524|consensus

Probab=98.26  E-value=3.5e-06  Score=54.52  Aligned_cols=71  Identities=14%  Similarity=0.175  Sum_probs=49.1

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-------------------------ccCCCCeE
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-------------------------KKFDESIL   82 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-------------------------~~~~~~v~   82 (106)
                      |.+-+.++.|++.+..   +++|++|-..++||.. |..+..-..|+                         +.+.+.|+
T Consensus       185 HDGiiL~~~W~~~s~l---I~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSif  260 (737)
T KOG1524|consen  185 HDGLVLSLSWSTQSNI---IASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIF  260 (737)
T ss_pred             cCcEEEEeecCccccc---eeecCCceeEEeeccc-CcccccCChhccceeeeeeccccceeeeeeeeeeecCCCccceE
Confidence            6666677999998888   8999999999999975 33332222222                         11235677


Q ss_pred             EEEEcCCCCEEEEecCCCeE
Q psy17135         83 DVAFHPSKPFIASAGADGLA  102 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i  102 (106)
                      .++||+||..++.|...|.+
T Consensus       261 nlsWS~DGTQ~a~gt~~G~v  280 (737)
T KOG1524|consen  261 NLSWSADGTQATCGTSTGQL  280 (737)
T ss_pred             EEEEcCCCceeeccccCceE
Confidence            77788877777777776654

>KOG0280|consensus

Probab=98.25  E-value=6.4e-06  Score=49.64  Aligned_cols=80  Identities=13%  Similarity=0.089  Sum_probs=55.4

Q ss_pred             CCcCCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCC
Q psy17135          1 MQKVPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFD   78 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~   78 (106)
                      ++...|+.+..||++. ++.+... ...|+.++.++.-+|..+..  ++||+.|-.+++||.++ ++++..-...     
T Consensus       182 ytGgDD~~l~~~D~R~p~~~i~~n-~kvH~~GV~SI~ss~~~~~~--I~TGsYDe~i~~~DtRnm~kPl~~~~v~-----  253 (339)
T KOG0280|consen  182 YTGGDDGSLSCWDIRIPKTFIWHN-SKVHTSGVVSIYSSPPKPTY--IATGSYDECIRVLDTRNMGKPLFKAKVG-----  253 (339)
T ss_pred             EecCCCceEEEEEecCCcceeeec-ceeeecceEEEecCCCCCce--EEEeccccceeeeehhcccCccccCccc-----
Confidence            3567899999999993 4332222 22356667777767765554  89999999999999995 6666443221     


Q ss_pred             CCeEEEEEcC
Q psy17135         79 ESILDVAFHP   88 (106)
Q Consensus        79 ~~v~~~~~~~   88 (106)
                      ++|+.+..+|
T Consensus       254 GGVWRi~~~p  263 (339)
T KOG0280|consen  254 GGVWRIKHHP  263 (339)
T ss_pred             cceEEEEecc
Confidence            5777777776

>KOG4227|consensus

Probab=98.25  E-value=1.5e-05  Score=50.05  Aligned_cols=98  Identities=12%  Similarity=0.121  Sum_probs=71.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chhee-ccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEI-TAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~-~~~~~~~~~~   80 (106)
                      ..++++|...|+.+.+.+..+.-......+..+.-+|..+.   +++.+.++.|.+||.+..+ ....+ .+...   ..
T Consensus       123 G~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~---~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~---~~  196 (609)
T KOG4227|consen  123 GERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNT---LIVVTRAKLVSFIDNRDRQNPISLVLPANSG---KN  196 (609)
T ss_pred             CCCcceeEeeecccceeeeeecccCcccceeecccCCCCce---EEEEecCceEEEEeccCCCCCCceeeecCCC---cc
Confidence            45789999999999988666654333345566777888777   7999999999999998765 33222 22221   67


Q ss_pred             eEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      ...+.|+|... +|++.+..+.+.+||
T Consensus       197 F~t~~F~P~~P~Li~~~~~~~G~~~~D  223 (609)
T KOG4227|consen  197 FYTAEFHPETPALILVNSETGGPNVFD  223 (609)
T ss_pred             ceeeeecCCCceeEEeccccCCCCcee
Confidence            78889999554 578888888888886

>KOG1963|consensus

Probab=98.24  E-value=1.3e-05  Score=53.95  Aligned_cols=93  Identities=13%  Similarity=0.252  Sum_probs=65.9

Q ss_pred             ceEEEEeCccCce-eeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEee-CC-Cc--cchheeccccccCCCC
Q psy17135          7 SVIYIWTLLELQT-YARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWN-LD-NK--TCVQEITAHRKKFDES   80 (106)
Q Consensus         7 ~~i~iwd~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd-~~-~~--~~~~~~~~~~~~~~~~   80 (106)
                      ..+.+|+..+... ....... +|.-...+..++|.+..   ++++..||+|.+|. .. ..  .....+..|.    ..
T Consensus       181 ~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~---~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~----~~  253 (792)
T KOG1963|consen  181 CKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERY---LAAGDSDGRILVWRDFGSSDDSETCTLLHWHH----DE  253 (792)
T ss_pred             eeEEEEEecccceeeccchhhhhhcccceeEEeccccce---EEEeccCCcEEEEeccccccccccceEEEecc----cc
Confidence            4567787766441 1111111 13333566788888888   89999999999994 33 11  2245566787    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++|+++|.++.||+..+.+.+|.
T Consensus       254 V~~L~fS~~G~~LlSGG~E~VLv~Wq  279 (792)
T KOG1963|consen  254 VNSLSFSSDGAYLLSGGREGVLVLWQ  279 (792)
T ss_pred             cceeEEecCCceEeecccceEEEEEe
Confidence            99999999999999999999998883

>KOG1064|consensus

Probab=98.20  E-value=1.5e-05  Score=57.93  Aligned_cols=97  Identities=18%  Similarity=0.183  Sum_probs=67.1

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-----cc----------
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-----TC----------   66 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-----~~----------   66 (106)
                      +...||.|++|.-..++.+..+..... +.+..+.|+..++.   +..+..||.+.+|.....     +|          
T Consensus      2225 tgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk---~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~F 2300 (2439)
T KOG1064|consen 2225 TGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNK---FGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRF 2300 (2439)
T ss_pred             ecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCc---eeeeccCCceeecccCCcceeccccCCccccceee
Confidence            567899999999998888666654332 44444556665555   455666666666654311     00          


Q ss_pred             ----------------------------hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         67 ----------------------------VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        67 ----------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                  ......|    ..++++++|-|....++||+++|.|.+||
T Consensus      2301 i~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H----~~gaT~l~~~P~~qllisggr~G~v~l~D 2364 (2439)
T KOG1064|consen 2301 IGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCH----DGGATVLAYAPKHQLLISGGRKGEVCLFD 2364 (2439)
T ss_pred             eehhhhccccCCCCCcccchhcccCcccceeeeec----CCCceEEEEcCcceEEEecCCcCcEEEee
Confidence                                        0001223    37899999999999999999999999998

>KOG1240|consensus

Probab=98.19  E-value=1.3e-05  Score=56.13  Aligned_cols=75  Identities=15%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             ccCCCCCCCCeeEeeeCC-CCceEEEeeCCCCcEEEeeCCCcc-------chheeccccccCCCCeEEEEEcCCCCEEEE
Q psy17135         24 DCPELNSEPPACQTIPSS-NISLFDSRPGHDCSIRLWNLDNKT-------CVQEITAHRKKFDESILDVAFHPSKPFIAS   95 (106)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~v~iwd~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s   95 (106)
                      ..+.|...+.....++.. ..   ++||+.||+|++|+++.-.       ...++....    ..+.++...+.+..+|.
T Consensus      1043 hL~Ehs~~v~k~a~s~~~~s~---FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~----sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1043 HLHEHSSAVIKLAVSSEHTSL---FVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEG----SRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred             hhhhccccccceeecCCCCce---EEEecCCceEEEeeehhhhcCcceeeeeEEEeccC----CceEEEEeccCCCeEEE
Confidence            333344444444444444 44   8999999999999987421       111222122    68889999999999999


Q ss_pred             ecCCCeEEEc
Q psy17135         96 AGADGLAKVF  105 (106)
Q Consensus        96 ~~~d~~i~iw  105 (106)
                      ++.||.|++.
T Consensus      1116 ~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1116 STKDGSVRVL 1125 (1431)
T ss_pred             EcCCCeEEEE
Confidence            9999999875

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.10  E-value=0.00011  Score=47.09  Aligned_cols=90  Identities=16%  Similarity=0.156  Sum_probs=55.4

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      +..|.+||+.+++........   .......|+|++...  +++.+.++  .+.+||+++++.. .+..+.    ..+..
T Consensus       222 ~~~i~i~dl~~G~~~~l~~~~---~~~~~~~~SPDG~~L--a~~~~~~g~~~I~~~d~~tg~~~-~lt~~~----~~~~~  291 (429)
T PRK03629        222 RSALVIQTLANGAVRQVASFP---RHNGAPAFSPDGSKL--AFALSKTGSLNLYVMDLASGQIR-QVTDGR----SNNTE  291 (429)
T ss_pred             CcEEEEEECCCCCeEEccCCC---CCcCCeEECCCCCEE--EEEEcCCCCcEEEEEECCCCCEE-EccCCC----CCcCc
Confidence            457888998887652222221   223457899998874  22333344  5888999877643 343333    46678


Q ss_pred             EEEcCCCCEEEEecC-CCeEEEc
Q psy17135         84 VAFHPSKPFIASAGA-DGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~-d~~i~iw  105 (106)
                      ..|+|+++.++..+. ++...+|
T Consensus       292 ~~wSPDG~~I~f~s~~~g~~~Iy  314 (429)
T PRK03629        292 PTWFPDSQNLAYTSDQAGRPQVY  314 (429)
T ss_pred             eEECCCCCEEEEEeCCCCCceEE
Confidence            899999998765553 4444444

>KOG1064|consensus

Probab=98.09  E-value=4.3e-06  Score=60.48  Aligned_cols=85  Identities=9%  Similarity=0.230  Sum_probs=62.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..++.+.+||..-.....-.. ..|..+...+.+.|..+.   +.+|+.+|.|++||++..+...+++.           
T Consensus      2312 ~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~ql---lisggr~G~v~l~D~rqrql~h~~~~----------- 2376 (2439)
T KOG1064|consen 2312 SDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQL---LISGGRKGEVCLFDIRQRQLRHTFQA----------- 2376 (2439)
T ss_pred             CCCCcccchhcccCcccceee-eecCCCceEEEEcCcceE---EEecCCcCcEEEeehHHHHHHHHhhh-----------
Confidence            456788999975432211222 224556778899998888   89999999999999998876665543           


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        +. ...++++++..|.++||+
T Consensus      2377 --~~-~~~~f~~~ss~g~ikIw~ 2396 (2439)
T KOG1064|consen 2377 --LD-TREYFVTGSSEGNIKIWR 2396 (2439)
T ss_pred             --hh-hhheeeccCcccceEEEE
Confidence              22 356788999999999995

>KOG3914|consensus

Probab=98.08  E-value=3.2e-05  Score=48.17  Aligned_cols=71  Identities=13%  Similarity=0.157  Sum_probs=55.7

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |-+-...+.++|+++.   +.++..|..|++=.......+..+ -+|.    ..|..++.-++ ..|+|+|.|+++++||
T Consensus       150 hvSml~dVavS~D~~~---IitaDRDEkIRvs~ypa~f~IesfclGH~----eFVS~isl~~~-~~LlS~sGD~tlr~Wd  221 (390)
T KOG3914|consen  150 HVSMLLDVAVSPDDQF---IITADRDEKIRVSRYPATFVIESFCLGHK----EFVSTISLTDN-YLLLSGSGDKTLRLWD  221 (390)
T ss_pred             hhhhhheeeecCCCCE---EEEecCCceEEEEecCcccchhhhccccH----hheeeeeeccC-ceeeecCCCCcEEEEe
Confidence            3445566889998877   899999999998777665555555 3577    88888888765 4589999999999997

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.08  E-value=6.6e-05  Score=48.09  Aligned_cols=90  Identities=13%  Similarity=0.197  Sum_probs=55.6

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC--CCccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL--DNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ...|.+||+.+++.......   ........|+|++...  +++.+.++...+|.+  ..+. ...+..+.    .....
T Consensus       219 ~~~I~~~dl~~g~~~~l~~~---~g~~~~~~~SPDG~~l--a~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~----~~~~~  288 (427)
T PRK02889        219 KPVVYVHDLATGRRRVVANF---KGSNSAPAWSPDGRTL--AVALSRDGNSQIYTVNADGSG-LRRLTQSS----GIDTE  288 (427)
T ss_pred             CcEEEEEECCCCCEEEeecC---CCCccceEECCCCCEE--EEEEccCCCceEEEEECCCCC-cEECCCCC----CCCcC
Confidence            35699999998876322222   2234467899998873  346677777777754  3333 44554444    44556


Q ss_pred             EEEcCCCCEEEEec-CCCeEEEc
Q psy17135         84 VAFHPSKPFIASAG-ADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~-~d~~i~iw  105 (106)
                      ..|+||++.++..+ .++...+|
T Consensus       289 ~~wSpDG~~l~f~s~~~g~~~Iy  311 (427)
T PRK02889        289 PFFSPDGRSIYFTSDRGGAPQIY  311 (427)
T ss_pred             eEEcCCCCEEEEEecCCCCcEEE
Confidence            78999999876544 44555554

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.06  E-value=0.00013  Score=46.84  Aligned_cols=89  Identities=17%  Similarity=0.120  Sum_probs=55.0

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ...|.+||+.+++.......   ........|+|.+...  +++.+.++  .+.+||+.+++. ..+..+.    .....
T Consensus       227 ~~~l~~~dl~~g~~~~l~~~---~g~~~~~~~SpDG~~l--~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~----~~~~~  296 (433)
T PRK04922        227 RSAIYVQDLATGQRELVASF---RGINGAPSFSPDGRRL--ALTLSRDGNPEIYVMDLGSRQL-TRLTNHF----GIDTE  296 (433)
T ss_pred             CcEEEEEECCCCCEEEeccC---CCCccCceECCCCCEE--EEEEeCCCCceEEEEECCCCCe-EECccCC----CCccc
Confidence            45789999988775322222   2223357899988874  23444444  588999987763 3444443    34467


Q ss_pred             EEEcCCCCEEEEec-CCCeEEE
Q psy17135         84 VAFHPSKPFIASAG-ADGLAKV  104 (106)
Q Consensus        84 ~~~~~~~~~~~s~~-~d~~i~i  104 (106)
                      .+|+|+++.++.++ .++...+
T Consensus       297 ~~~spDG~~l~f~sd~~g~~~i  318 (433)
T PRK04922        297 PTWAPDGKSIYFTSDRGGRPQI  318 (433)
T ss_pred             eEECCCCCEEEEEECCCCCceE
Confidence            79999999876554 4444333

>KOG4532|consensus

Probab=98.05  E-value=9.6e-05  Score=44.41  Aligned_cols=96  Identities=9%  Similarity=0.024  Sum_probs=67.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~   80 (106)
                      +.+|.++++.++..+..  ++..+..+-....+.+++++..   +++.+....|..|.++...  .++...+..   ++.
T Consensus       134 ~sndht~k~~~~~~~s~--~~~~h~~~~~~ns~~~snd~~~---~~~Vgds~~Vf~y~id~~sey~~~~~~a~t---~D~  205 (344)
T KOG4532|consen  134 ASNDHTGKTMVVSGDSN--KFAVHNQNLTQNSLHYSNDPSW---GSSVGDSRRVFRYAIDDESEYIENIYEAPT---SDH  205 (344)
T ss_pred             ccCCcceeEEEEecCcc--cceeeccccceeeeEEcCCCce---EEEecCCCcceEEEeCCccceeeeeEeccc---CCC
Confidence            56788888888875554  3333212222556778888877   6788888899999887643  334233333   256


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      -++..|+.....+|++..||++.|||
T Consensus       206 gF~~S~s~~~~~FAv~~Qdg~~~I~D  231 (344)
T KOG4532|consen  206 GFYNSFSENDLQFAVVFQDGTCAIYD  231 (344)
T ss_pred             ceeeeeccCcceEEEEecCCcEEEEE
Confidence            68889999888999999999999997

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.02  E-value=0.00017  Score=46.34  Aligned_cols=83  Identities=13%  Similarity=0.040  Sum_probs=53.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc--EEEeeCCCccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS--IRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .+..|.+||+.+++... +..  .........|+|++...  +++.+.++.  |.+||+.++.. ..+..+.    ....
T Consensus       224 g~~~i~~~dl~~g~~~~-l~~--~~g~~~~~~~SPDG~~l--a~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~----~~~~  293 (435)
T PRK05137        224 GRPRVYLLDLETGQREL-VGN--FPGMTFAPRFSPDGRKV--VMSLSQGGNTDIYTMDLRSGTT-TRLTDSP----AIDT  293 (435)
T ss_pred             CCCEEEEEECCCCcEEE-eec--CCCcccCcEECCCCCEE--EEEEecCCCceEEEEECCCCce-EEccCCC----CccC
Confidence            35789999998887622 221  12234467899988774  345555554  66778877653 4454444    4556


Q ss_pred             EEEEcCCCCEEEEec
Q psy17135         83 DVAFHPSKPFIASAG   97 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~   97 (106)
                      ...|+|++..++..+
T Consensus       294 ~~~~spDG~~i~f~s  308 (435)
T PRK05137        294 SPSYSPDGSQIVFES  308 (435)
T ss_pred             ceeEcCCCCEEEEEE
Confidence            789999999876554

>KOG3881|consensus

Probab=98.00  E-value=6.5e-05  Score=46.88  Aligned_cols=95  Identities=15%  Similarity=0.123  Sum_probs=68.6

Q ss_pred             ceEEEEeCccCceeeecccCCC-------CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCC
Q psy17135          7 SVIYIWTLLELQTYARNDCPEL-------NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFD   78 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~   78 (106)
                      ..+.|||+...+.+........       ......+.|.+...... |+++..-+.+++||.+.+ +++.++...+    
T Consensus       173 n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~-fat~T~~hqvR~YDt~~qRRPV~~fd~~E----  247 (412)
T KOG3881|consen  173 NELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYK-FATITRYHQVRLYDTRHQRRPVAQFDFLE----  247 (412)
T ss_pred             cceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCce-EEEEecceeEEEecCcccCcceeEecccc----
Confidence            4578999987766444333211       11234456666633222 699999999999999975 5788887777    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.++...|++..+.++..-+.+..||
T Consensus       248 ~~is~~~l~p~gn~Iy~gn~~g~l~~FD  275 (412)
T KOG3881|consen  248 NPISSTGLTPSGNFIYTGNTKGQLAKFD  275 (412)
T ss_pred             CcceeeeecCCCcEEEEecccchhheec
Confidence            7999999999999999998888777665

>KOG2695|consensus

Probab=97.99  E-value=1.8e-05  Score=48.78  Aligned_cols=84  Identities=19%  Similarity=0.175  Sum_probs=52.1

Q ss_pred             CCcCCCceEEEEeCccCce---eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135          1 MQKVPSSVIYIWTLLELQT---YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      |.+.=+|+|.+||++--++   +..+..+.... .. +.++-..+.+. +++++.|...++|.++.|..+.+++......
T Consensus       315 maS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~-a~-l~~~v~~eeg~-I~s~GdDcytRiWsl~~ghLl~tipf~~s~~  391 (425)
T KOG2695|consen  315 MASDMTGKIKLYDLRATKCKKSVMQYEGHVNLS-AY-LPAHVKEEEGS-IFSVGDDCYTRIWSLDSGHLLCTIPFPYSAS  391 (425)
T ss_pred             eeccCcCceeEeeehhhhcccceeeeecccccc-cc-cccccccccce-EEEccCeeEEEEEecccCceeeccCCCCccc
Confidence            4556689999999987665   44444422111 11 11222222222 5789999999999999999888877654322


Q ss_pred             CCCeEEEEEc
Q psy17135         78 DESILDVAFH   87 (106)
Q Consensus        78 ~~~v~~~~~~   87 (106)
                      +..+..++|.
T Consensus       392 e~d~~sv~~~  401 (425)
T KOG2695|consen  392 EVDIPSVAFD  401 (425)
T ss_pred             cccccceehh
Confidence            2455666664

>KOG4190|consensus

Probab=97.99  E-value=1.1e-05  Score=52.82  Aligned_cols=66  Identities=26%  Similarity=0.405  Sum_probs=49.9

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      +..+......+.   +++++.|++|++|.++..       .|-.++++|.    ..|..+.|-.+.++++++  |+.+++
T Consensus       738 iRai~AidNENS---FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHk----k~i~~igfL~~lr~i~Sc--D~giHl  808 (1034)
T KOG4190|consen  738 IRAIAAIDNENS---FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHK----KPIHDIGFLADLRSIASC--DGGIHL  808 (1034)
T ss_pred             hHHHHhcccccc---eeeccCCceEEEEEeccccCccccceeeeEhhhcc----Ccccceeeeeccceeeec--cCccee
Confidence            334444444555   799999999999998742       2445667787    799999998888888776  888999


Q ss_pred             cC
Q psy17135        105 FV  106 (106)
Q Consensus       105 wd  106 (106)
                      ||
T Consensus       809 WD  810 (1034)
T KOG4190|consen  809 WD  810 (1034)
T ss_pred             ec
Confidence            97

>KOG4497|consensus

Probab=97.96  E-value=1.6e-05  Score=48.83  Aligned_cols=93  Identities=13%  Similarity=0.076  Sum_probs=69.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ++-.+.|-|..+.+....+.+   -..+..+.|..++...  +.....++.|++|++....-...+....    +++..+
T Consensus        27 ~~yrlviRd~~tlq~~qlf~c---ldki~yieW~ads~~i--lC~~yk~~~vqvwsl~Qpew~ckIdeg~----agls~~   97 (447)
T KOG4497|consen   27 SRYRLVIRDSETLQLHQLFLC---LDKIVYIEWKADSCHI--LCVAYKDPKVQVWSLVQPEWYCKIDEGQ----AGLSSI   97 (447)
T ss_pred             eeeEEEEeccchhhHHHHHHH---HHHhhheeeeccceee--eeeeeccceEEEEEeecceeEEEeccCC----Ccceee
Confidence            344567777777776555555   2346667888777765  5667888899999998776666676666    789999


Q ss_pred             EEcCCCCE-EEEecCCCeEEEcC
Q psy17135         85 AFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      .|||+|+. +.++..+-+|.+|.
T Consensus        98 ~WSPdgrhiL~tseF~lriTVWS  120 (447)
T KOG4497|consen   98 SWSPDGRHILLTSEFDLRITVWS  120 (447)
T ss_pred             eECCCcceEeeeecceeEEEEEE
Confidence            99999976 66777888888883

>KOG2321|consensus

Probab=97.96  E-value=3.5e-05  Score=50.38  Aligned_cols=95  Identities=11%  Similarity=0.096  Sum_probs=62.1

Q ss_pred             CCceEEEEeCccCceeeecccCCC---------CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPEL---------NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      .+|.|..||.++......+....+         ...+.++.|...+-.   ++.|..+|.+.++|+++.+++..-. |..
T Consensus       195 ~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~---~aVGts~G~v~iyDLRa~~pl~~kd-h~~  270 (703)
T KOG2321|consen  195 EDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLH---VAVGTSTGSVLIYDLRASKPLLVKD-HGY  270 (703)
T ss_pred             cCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCcee---EEeeccCCcEEEEEcccCCceeecc-cCC
Confidence            489999999987665444433221         112444666555444   8999999999999999988764332 221


Q ss_pred             cCCCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                        +..|..+.|.+.  +..++| .....++|||
T Consensus       271 --e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd  300 (703)
T KOG2321|consen  271 --ELPIKKLDWQDTDQQNKVVS-MDKRILKIWD  300 (703)
T ss_pred             --ccceeeecccccCCCceEEe-cchHHhhhcc
Confidence              167888888774  333444 3466788886

>PRK05137 tolB translocation protein TolB; Provisional

Probab=97.95  E-value=0.00018  Score=46.24  Aligned_cols=91  Identities=11%  Similarity=0.004  Sum_probs=56.4

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ...|.++|...... ..+..  +........|+|++....++.....+..|.+||+.+++. ..+....    ..+...+
T Consensus       181 ~~~l~~~d~dg~~~-~~lt~--~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~----g~~~~~~  252 (435)
T PRK05137        181 IKRLAIMDQDGANV-RYLTD--GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFP----GMTFAPR  252 (435)
T ss_pred             ceEEEEECCCCCCc-EEEec--CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCC----CcccCcE
Confidence            34788888865443 22222  233456688999988742211122346899999988764 3344444    5667889


Q ss_pred             EcCCCCEE-EEecCCCeEEE
Q psy17135         86 FHPSKPFI-ASAGADGLAKV  104 (106)
Q Consensus        86 ~~~~~~~~-~s~~~d~~i~i  104 (106)
                      |+|++..+ ++.+.++...+
T Consensus       253 ~SPDG~~la~~~~~~g~~~I  272 (435)
T PRK05137        253 FSPDGRKVVMSLSQGGNTDI  272 (435)
T ss_pred             ECCCCCEEEEEEecCCCceE
Confidence            99999876 46666665333

>KOG4640|consensus

Probab=97.94  E-value=3.8e-05  Score=50.54  Aligned_cols=68  Identities=12%  Similarity=0.159  Sum_probs=56.9

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE-EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL-DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..+.|+|.-..   +|.+.++|.+-+.-+. .+.+.+++.+.    ..+. +++|.|||+.++.|-.||+|++.|
T Consensus        22 ~i~~~ewnP~~dL---iA~~t~~gelli~R~n-~qRlwtip~p~----~~v~~sL~W~~DGkllaVg~kdG~I~L~D   90 (665)
T KOG4640|consen   22 NIKRIEWNPKMDL---IATRTEKGELLIHRLN-WQRLWTIPIPG----ENVTASLCWRPDGKLLAVGFKDGTIRLHD   90 (665)
T ss_pred             ceEEEEEcCccch---hheeccCCcEEEEEec-cceeEeccCCC----CccceeeeecCCCCEEEEEecCCeEEEEE
Confidence            4566889998888   8999999998888776 67777777666    4555 999999999999999999999876

>PRK02889 tolB translocation protein TolB; Provisional

Probab=97.93  E-value=0.00031  Score=45.10  Aligned_cols=89  Identities=10%  Similarity=0.019  Sum_probs=55.1

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|.++|...... ..+..  +........|+|++..   ++..+   ....+.+||+.+++.. .+....    ....
T Consensus       175 ~~~L~~~D~dG~~~-~~l~~--~~~~v~~p~wSPDG~~---la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~----g~~~  243 (427)
T PRK02889        175 RYQLQISDADGQNA-QSALS--SPEPIISPAWSPDGTK---LAYVSFESKKPVVYVHDLATGRRR-VVANFK----GSNS  243 (427)
T ss_pred             ccEEEEECCCCCCc-eEecc--CCCCcccceEcCCCCE---EEEEEccCCCcEEEEEECCCCCEE-EeecCC----CCcc
Confidence            34677777754332 12222  2334566889999877   33332   2345899999887643 233233    4556


Q ss_pred             EEEEcCCCCEEE-EecCCCeEEEc
Q psy17135         83 DVAFHPSKPFIA-SAGADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~~~~~~-s~~~d~~i~iw  105 (106)
                      ..+|+|++..++ +.+.++...+|
T Consensus       244 ~~~~SPDG~~la~~~~~~g~~~Iy  267 (427)
T PRK02889        244 APAWSPDGRTLAVALSRDGNSQIY  267 (427)
T ss_pred             ceEECCCCCEEEEEEccCCCceEE
Confidence            789999998765 66777776665

>KOG0309|consensus

Probab=97.88  E-value=1.6e-05  Score=53.38  Aligned_cols=96  Identities=16%  Similarity=0.215  Sum_probs=70.8

Q ss_pred             CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCC
Q psy17135          2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDE   79 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~   79 (106)
                      ++.-|..+..||+++... +.....  -+.....+.|+-....   +.+.+....+++||.+.| .++..+.+|.    .
T Consensus       132 tcsvdt~vh~wd~rSp~~p~ys~~~--w~s~asqVkwnyk~p~---vlasshg~~i~vwd~r~gs~pl~s~K~~v----s  202 (1081)
T KOG0309|consen  132 TCSVDTYVHAWDMRSPHRPFYSTSS--WRSAASQVKWNYKDPN---VLASSHGNDIFVWDLRKGSTPLCSLKGHV----S  202 (1081)
T ss_pred             eccccccceeeeccCCCcceeeeec--ccccCceeeecccCcc---hhhhccCCceEEEeccCCCcceEEecccc----e
Confidence            466788999999998654 122221  2345777889888777   556666678999999976 5677777777    7


Q ss_pred             CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..++|.- ....+.+++.|++++.||
T Consensus       203 ~vn~~~fnr~~~s~~~s~~~d~tvkfw~  230 (1081)
T KOG0309|consen  203 SVNSIDFNRFKYSEIMSSSNDGTVKFWD  230 (1081)
T ss_pred             eeehHHHhhhhhhhhcccCCCCceeeec
Confidence            888888764 444588899999999996

>PRK04922 tolB translocation protein TolB; Provisional

Probab=97.80  E-value=0.00035  Score=44.91  Aligned_cols=89  Identities=10%  Similarity=-0.049  Sum_probs=54.5

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|.+||...... ..+..  +........|+|.+..   ++..+   ....+.+||+.+++.. .+....    .....
T Consensus       184 ~~l~i~D~~g~~~-~~lt~--~~~~v~~p~wSpDg~~---la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~----g~~~~  252 (433)
T PRK04922        184 YALQVADSDGYNP-QTILR--SAEPILSPAWSPDGKK---LAYVSFERGRSAIYVQDLATGQRE-LVASFR----GINGA  252 (433)
T ss_pred             EEEEEECCCCCCc-eEeec--CCCccccccCCCCCCE---EEEEecCCCCcEEEEEECCCCCEE-EeccCC----CCccC
Confidence            4689999865443 22222  2334566789998887   44433   3356899999877642 233333    34457


Q ss_pred             EEEcCCCCEE-EEecCCC--eEEEcC
Q psy17135         84 VAFHPSKPFI-ASAGADG--LAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~-~s~~~d~--~i~iwd  106 (106)
                      .+|+|++..+ ++.+.++  .+++||
T Consensus       253 ~~~SpDG~~l~~~~s~~g~~~Iy~~d  278 (433)
T PRK04922        253 PSFSPDGRRLALTLSRDGNPEIYVMD  278 (433)
T ss_pred             ceECCCCCEEEEEEeCCCCceEEEEE
Confidence            8999999876 4555555  466553

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=97.78  E-value=0.00085  Score=42.68  Aligned_cols=81  Identities=19%  Similarity=0.107  Sum_probs=49.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--CcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--CSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..|.+||+.+++.......   ........|+|.+...  +++.+.+  ..+.+|++.+++. ..+..+.    ......
T Consensus       214 ~~i~v~d~~~g~~~~~~~~---~~~~~~~~~spDg~~l--~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~----~~~~~~  283 (417)
T TIGR02800       214 PEIYVQDLATGQREKVASF---PGMNGAPAFSPDGSKL--AVSLSKDGNPDIYVMDLDGKQL-TRLTNGP----GIDTEP  283 (417)
T ss_pred             cEEEEEECCCCCEEEeecC---CCCccceEECCCCCEE--EEEECCCCCccEEEEECCCCCE-EECCCCC----CCCCCE
Confidence            5799999988765222221   2234457889988763  3344444  3588888877653 3333333    334456


Q ss_pred             EEcCCCCEEEEec
Q psy17135         85 AFHPSKPFIASAG   97 (106)
Q Consensus        85 ~~~~~~~~~~s~~   97 (106)
                      .|+|+++.++..+
T Consensus       284 ~~s~dg~~l~~~s  296 (417)
T TIGR02800       284 SWSPDGKSIAFTS  296 (417)
T ss_pred             EECCCCCEEEEEE
Confidence            8999998765544

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1409|consensus

Probab=97.73  E-value=9.2e-05  Score=45.74  Aligned_cols=72  Identities=17%  Similarity=0.308  Sum_probs=56.8

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.....+..|.+....   +.+|.+|..+-+||+-..+- ...+.+|.    ..|..+.+-+-...++|++.|+.|-+|+
T Consensus       196 h~~~~~~l~Wd~~~~~---LfSg~~d~~vi~wdigg~~g~~~el~gh~----~kV~~l~~~~~t~~l~S~~edg~i~~w~  268 (404)
T KOG1409|consen  196 HTGEVTCLKWDPGQRL---LFSGASDHSVIMWDIGGRKGTAYELQGHN----DKVQALSYAQHTRQLISCGEDGGIVVWN  268 (404)
T ss_pred             cccceEEEEEcCCCcE---EEeccccCceEEEeccCCcceeeeeccch----hhhhhhhhhhhheeeeeccCCCeEEEEe
Confidence            4455667788887776   89999999999999975543 34556677    7788887777778899999999999996

>KOG1334|consensus

Probab=97.70  E-value=7.3e-05  Score=48.00  Aligned_cols=70  Identities=13%  Similarity=0.254  Sum_probs=55.0

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEEEEcC--CCCEEEEecCCCeEEE
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHP--SKPFIASAGADGLAKV  104 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~i~i  104 (106)
                      |.+-+..+.|+..+..   +++++.|..|.+||+..++....+ .+|.    ..|+-..|-|  +...+++++.||.+++
T Consensus       141 H~GcVntV~FN~~Gd~---l~SgSDD~~vv~WdW~~~~~~l~f~SGH~----~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  141 HKGCVNTVHFNQRGDV---LASGSDDLQVVVWDWVSGSPKLSFESGHC----NNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             CCCccceeeecccCce---eeccCccceEEeehhhccCcccccccccc----cchhhhhccCCCCCcCceeccccCceee
Confidence            4555677888888877   899999999999999988765444 4566    7788778887  4556999999998875

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.70  E-value=0.0013  Score=42.62  Aligned_cols=88  Identities=16%  Similarity=0.136  Sum_probs=62.4

Q ss_pred             CCCc-eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          4 VPSS-VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .+|| .+-|+|..+++. .+....  -+.+-.+...+.+..   ++.+.....+-+.|+.+++.--.-+...    +-|+
T Consensus       378 t~dgD~l~iyd~~~~e~-kr~e~~--lg~I~av~vs~dGK~---~vvaNdr~el~vididngnv~~idkS~~----~lIt  447 (668)
T COG4946         378 TNDGDKLGIYDKDGGEV-KRIEKD--LGNIEAVKVSPDGKK---VVVANDRFELWVIDIDNGNVRLIDKSEY----GLIT  447 (668)
T ss_pred             ccCCceEEEEecCCceE-EEeeCC--ccceEEEEEcCCCcE---EEEEcCceEEEEEEecCCCeeEeccccc----ceeE
Confidence            4566 788999988875 233322  233555666666666   7788877888888999987432223333    7899


Q ss_pred             EEEEcCCCCEEEEecCCCe
Q psy17135         83 DVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~  101 (106)
                      .+.|||+.+++|-+-.+|.
T Consensus       448 df~~~~nsr~iAYafP~gy  466 (668)
T COG4946         448 DFDWHPNSRWIAYAFPEGY  466 (668)
T ss_pred             EEEEcCCceeEEEecCcce
Confidence            9999999999999988774

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.67  E-value=0.0017  Score=46.31  Aligned_cols=70  Identities=9%  Similarity=0.013  Sum_probs=48.7

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc----------ccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR----------KKFDESILDVAFHPSKPFIASAGADGLA  102 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~s~~~d~~i  102 (106)
                      ..+.+.+.+..   +++-..++.|++||..++...... +..          ...-.....++++++++.+++-+.+++|
T Consensus       807 ~Gvavd~dG~L---YVADs~N~rIrviD~~tg~v~tia-G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I  882 (1057)
T PLN02919        807 LGVLCAKDGQI---YVADSYNHKIKKLDPATKRVTTLA-GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI  882 (1057)
T ss_pred             ceeeEeCCCcE---EEEECCCCEEEEEECCCCeEEEEe-ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence            34556665543   688888999999999877643221 110          0001356788999999999999999999


Q ss_pred             EEcC
Q psy17135        103 KVFV  106 (106)
Q Consensus       103 ~iwd  106 (106)
                      ++||
T Consensus       883 rvid  886 (1057)
T PLN02919        883 RYLD  886 (1057)
T ss_pred             EEEE
Confidence            9986

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.66  E-value=0.002  Score=40.57  Aligned_cols=94  Identities=6%  Similarity=-0.044  Sum_probs=62.6

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC---------CCCcEEEeeCCCccchheeccccccC
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG---------HDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---------~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      ++|.+.|..+++.+......  . .... ..+|++...  .++.+         .+..|.+||..+.+.+..+....+.+
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G--~-~P~~-~~spDg~~l--yva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~  100 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGG--F-LPNP-VVASDGSFF--AHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR  100 (352)
T ss_pred             ceEEEEECCCCEEEEEEEcc--C-CCce-eECCCCCEE--EEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch
Confidence            88999999998886666542  1 1222 367776663  34445         57889999999999888887543100


Q ss_pred             ---CCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135         78 ---DESILDVAFHPSKPFIASAGA--DGLAKVFV  106 (106)
Q Consensus        78 ---~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd  106 (106)
                         ......++++|+++++.....  +..+.+.|
T Consensus       101 ~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD  134 (352)
T TIGR02658       101 FLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVD  134 (352)
T ss_pred             hhccCccceEEECCCCCEEEEecCCCCCEEEEEE
Confidence               123346789999998776552  45565543

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK03629 tolB translocation protein TolB; Provisional

Probab=97.62  E-value=0.0015  Score=42.07  Aligned_cols=92  Identities=11%  Similarity=0.016  Sum_probs=54.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF   86 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~   86 (106)
                      ..|.++|....... .+..  +........|+|++....++.....+..+.+|++.+++.. .+....    .......|
T Consensus       179 ~~l~~~d~dg~~~~-~lt~--~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~----~~~~~~~~  250 (429)
T PRK03629        179 YELRVSDYDGYNQF-VVHR--SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFP----RHNGAPAF  250 (429)
T ss_pred             eeEEEEcCCCCCCE-Eeec--CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCC----CCcCCeEE
Confidence            46888988765441 2222  1234566889999987433111233457889999877532 222222    33456799


Q ss_pred             cCCCCEEEEe-cCCC--eEEEcC
Q psy17135         87 HPSKPFIASA-GADG--LAKVFV  106 (106)
Q Consensus        87 ~~~~~~~~s~-~~d~--~i~iwd  106 (106)
                      +|+++.++.. +.++  .+.+||
T Consensus       251 SPDG~~La~~~~~~g~~~I~~~d  273 (429)
T PRK03629        251 SPDGSKLAFALSKTGSLNLYVMD  273 (429)
T ss_pred             CCCCCEEEEEEcCCCCcEEEEEE
Confidence            9999987643 4454  365553

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=97.61  E-value=0.0013  Score=41.60  Aligned_cols=96  Identities=10%  Similarity=0.096  Sum_probs=59.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc---CCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK---FDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~~~   80 (106)
                      ..||.|.++|+.+++.+.....   ......+.+++.+...  +++....+.+.++|.++.+.++.+......   ...+
T Consensus        55 ~rdg~vsviD~~~~~~v~~i~~---G~~~~~i~~s~DG~~~--~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~R  129 (369)
T PF02239_consen   55 NRDGTVSVIDLATGKVVATIKV---GGNPRGIAVSPDGKYV--YVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESR  129 (369)
T ss_dssp             ETTSEEEEEETTSSSEEEEEE----SSEEEEEEE--TTTEE--EEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---
T ss_pred             cCCCeEEEEECCcccEEEEEec---CCCcceEEEcCCCCEE--EEEecCCCceeEeccccccceeecccccccccccCCC
Confidence            3689999999999998777655   2235668888888873  445567899999999998888877543210   1146


Q ss_pred             eEEEEEcCCCCEE-EEecCCCeEEE
Q psy17135         81 ILDVAFHPSKPFI-ASAGADGLAKV  104 (106)
Q Consensus        81 v~~~~~~~~~~~~-~s~~~d~~i~i  104 (106)
                      +..+..+|....+ ++--..+.|.+
T Consensus       130 v~aIv~s~~~~~fVv~lkd~~~I~v  154 (369)
T PF02239_consen  130 VAAIVASPGRPEFVVNLKDTGEIWV  154 (369)
T ss_dssp             EEEEEE-SSSSEEEEEETTTTEEEE
T ss_pred             ceeEEecCCCCEEEEEEccCCeEEE
Confidence            7777777877744 44444455543

...

>PRK04792 tolB translocation protein TolB; Provisional

Probab=97.58  E-value=0.0025  Score=41.32  Aligned_cols=88  Identities=15%  Similarity=0.151  Sum_probs=52.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc--EEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS--IRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..|.+||+.+++.......   ........|+|++...  +++.+.++.  |.++|+.+++. ..+..+.    ......
T Consensus       242 ~~L~~~dl~tg~~~~lt~~---~g~~~~~~wSPDG~~L--a~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~----~~~~~p  311 (448)
T PRK04792        242 AEIFVQDIYTQVREKVTSF---PGINGAPRFSPDGKKL--ALVLSKDGQPEIYVVDIATKAL-TRITRHR----AIDTEP  311 (448)
T ss_pred             cEEEEEECCCCCeEEecCC---CCCcCCeeECCCCCEE--EEEEeCCCCeEEEEEECCCCCe-EECccCC----CCccce
Confidence            4688888887765222222   1122356899988874  334555554  66778876653 3444443    455677


Q ss_pred             EEcCCCCEEEE-ecCCCeEEE
Q psy17135         85 AFHPSKPFIAS-AGADGLAKV  104 (106)
Q Consensus        85 ~~~~~~~~~~s-~~~d~~i~i  104 (106)
                      .|+|+++.++. +..++...+
T Consensus       312 ~wSpDG~~I~f~s~~~g~~~I  332 (448)
T PRK04792        312 SWHPDGKSLIFTSERGGKPQI  332 (448)
T ss_pred             EECCCCCEEEEEECCCCCceE
Confidence            89999987644 444444333

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=97.57  E-value=0.0026  Score=40.51  Aligned_cols=90  Identities=16%  Similarity=0.092  Sum_probs=52.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      +..|.+||+.+++.. .+..  +........|+|.+...  +++....+  .|.++++.+++. ..+..+.    .....
T Consensus       257 ~~~i~~~d~~~~~~~-~l~~--~~~~~~~~~~s~dg~~l--~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~----~~~~~  326 (417)
T TIGR02800       257 NPDIYVMDLDGKQLT-RLTN--GPGIDTEPSWSPDGKSI--AFTSDRGGSPQIYMMDADGGEV-RRLTFRG----GYNAS  326 (417)
T ss_pred             CccEEEEECCCCCEE-ECCC--CCCCCCCEEECCCCCEE--EEEECCCCCceEEEEECCCCCE-EEeecCC----CCccC
Confidence            346888888876642 2221  12223346788877763  23333333  466777766553 3333333    45667


Q ss_pred             EEEcCCCCEEEEecCCC---eEEEc
Q psy17135         84 VAFHPSKPFIASAGADG---LAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~---~i~iw  105 (106)
                      ..|+|++..++.++.++   .+.++
T Consensus       327 ~~~spdg~~i~~~~~~~~~~~i~~~  351 (417)
T TIGR02800       327 PSWSPDGDLIAFVHREGGGFNIAVM  351 (417)
T ss_pred             eEECCCCCEEEEEEccCCceEEEEE
Confidence            78999999887776654   45554

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=97.56  E-value=0.0028  Score=40.69  Aligned_cols=85  Identities=12%  Similarity=0.033  Sum_probs=50.7

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..|.+||+.+++.......   ........|+|++...  +++.+.++  .+.++|+.+++. ..+..+.    ......
T Consensus       223 ~~l~~~~l~~g~~~~l~~~---~g~~~~~~~SpDG~~l--a~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~----~~~~~~  292 (430)
T PRK00178        223 PRIFVQNLDTGRREQITNF---EGLNGAPAWSPDGSKL--AFVLSKDGNPEIYVMDLASRQL-SRVTNHP----AIDTEP  292 (430)
T ss_pred             CEEEEEECCCCCEEEccCC---CCCcCCeEECCCCCEE--EEEEccCCCceEEEEECCCCCe-EEcccCC----CCcCCe
Confidence            4688889888765222221   1223357899988874  23444444  577789887653 3344443    445567


Q ss_pred             EEcCCCCEEEE-ecCCCe
Q psy17135         85 AFHPSKPFIAS-AGADGL  101 (106)
Q Consensus        85 ~~~~~~~~~~s-~~~d~~  101 (106)
                      .|+|++..++. +..++.
T Consensus       293 ~~spDg~~i~f~s~~~g~  310 (430)
T PRK00178        293 FWGKDGRTLYFTSDRGGK  310 (430)
T ss_pred             EECCCCCEEEEEECCCCC
Confidence            89999987644 434443

>KOG4190|consensus

Probab=97.51  E-value=0.00027  Score=46.62  Aligned_cols=103  Identities=9%  Similarity=0.079  Sum_probs=67.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-ccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-KKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~v~   82 (106)
                      +.||-|++||--.++++......-.++....+.-.+.-....+++-++...+|+++|.+.+.-...+.... .....-+.
T Consensus       801 ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R  880 (1034)
T KOG4190|consen  801 SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTR  880 (1034)
T ss_pred             eccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhee
Confidence            46899999999888876544332222333344445553444344556888999999999876444433211 00115678


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++.-+.|++++.+-.+|++.+-|
T Consensus       881 ~iaVa~~GN~lAa~LSnGci~~LD  904 (1034)
T KOG4190|consen  881 AIAVADKGNKLAAALSNGCIAILD  904 (1034)
T ss_pred             EEEeccCcchhhHHhcCCcEEEEe
Confidence            899999999999999888876643

>KOG1275|consensus

Probab=97.45  E-value=0.00042  Score=47.82  Aligned_cols=96  Identities=8%  Similarity=0.103  Sum_probs=68.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccc-hheeccccccCCCCe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTC-VQEITAHRKKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~-~~~~~~~~~~~~~~v   81 (106)
                      ..|..|++||++..+.+.+...+.   +.--+.|+|.-...  ++.++..|...+.|..+ +.+ ......++.  +..+
T Consensus       243 ~~D~FvkVYDLRmmral~PI~~~~---~P~flrf~Psl~t~--~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~--~s~i  315 (1118)
T KOG1275|consen  243 AMDPFVKVYDLRMMRALSPIQFPY---GPQFLRFHPSLTTR--LAVTSQSGQFQFVDTATLSNPPAGVKMVNPN--GSGI  315 (1118)
T ss_pred             cccchhhhhhhhhhhccCCccccc---Cchhhhhcccccce--EEEEecccceeeccccccCCCccceeEEccC--CCcc
Confidence            458889999999999877776632   33446778875554  67888889999888332 222 222222221  1568


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.+++++..++-+..+|.|.+|.
T Consensus       316 ~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  316 SAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             eeEEecCCCceEEEecccCcEeeec
Confidence            9999999999999999999999983

>KOG3914|consensus

Probab=97.43  E-value=0.0023  Score=40.27  Aligned_cols=68  Identities=28%  Similarity=0.403  Sum_probs=50.1

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      ...+.+........+.-..+....+.+|....+. ...+-+|.    ..+..++++||.+.++++.+|..|++
T Consensus       110 ~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~-~~~~lGhv----Sml~dVavS~D~~~IitaDRDEkIRv  177 (390)
T KOG3914|consen  110 PTAISFIREDTSVLVADKAGDVYSFDILSADSGR-CEPILGHV----SMLLDVAVSPDDQFIITADRDEKIRV  177 (390)
T ss_pred             cceeeeeeccceEEEEeecCCceeeeeecccccC-cchhhhhh----hhhheeeecCCCCEEEEecCCceEEE
Confidence            4456666666665444455666677777766544 34455687    89999999999999999999999986

>PRK00178 tolB translocation protein TolB; Provisional

Probab=97.43  E-value=0.0032  Score=40.47  Aligned_cols=88  Identities=15%  Similarity=-0.016  Sum_probs=50.7

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC--CCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH--DCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .|.++|...+.. .....  +........|+|.+....+  +...  ...+.+|++.+++.. .+....    .......
T Consensus       180 ~l~~~d~~g~~~-~~l~~--~~~~~~~p~wSpDG~~la~--~s~~~~~~~l~~~~l~~g~~~-~l~~~~----g~~~~~~  249 (430)
T PRK00178        180 TLQRSDYDGARA-VTLLQ--SREPILSPRWSPDGKRIAY--VSFEQKRPRIFVQNLDTGRRE-QITNFE----GLNGAPA  249 (430)
T ss_pred             EEEEECCCCCCc-eEEec--CCCceeeeeECCCCCEEEE--EEcCCCCCEEEEEECCCCCEE-EccCCC----CCcCCeE
Confidence            577788875543 12221  1233456789999887322  2222  245888899877542 232222    3445688


Q ss_pred             EcCCCCEEE-EecCCCe--EEEc
Q psy17135         86 FHPSKPFIA-SAGADGL--AKVF  105 (106)
Q Consensus        86 ~~~~~~~~~-s~~~d~~--i~iw  105 (106)
                      |+|+++.++ +...++.  +.++
T Consensus       250 ~SpDG~~la~~~~~~g~~~Iy~~  272 (430)
T PRK00178        250 WSPDGSKLAFVLSKDGNPEIYVM  272 (430)
T ss_pred             ECCCCCEEEEEEccCCCceEEEE
Confidence            999998765 5555553  4443

>KOG1409|consensus

Probab=97.41  E-value=0.00059  Score=42.37  Aligned_cols=60  Identities=15%  Similarity=0.238  Sum_probs=41.9

Q ss_pred             CCcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135          1 MQKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK   64 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~   64 (106)
                      |.++.|..+.+||+-..+- .....+.|+..+..+.+.+....   +.+++.||.|-+|+++..
T Consensus       213 fSg~~d~~vi~wdigg~~g-~~~el~gh~~kV~~l~~~~~t~~---l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  213 FSGASDHSVIMWDIGGRKG-TAYELQGHNDKVQALSYAQHTRQ---LISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             EeccccCceEEEeccCCcc-eeeeeccchhhhhhhhhhhhhee---eeeccCCCeEEEEeccce
Confidence            4577899999999864333 13344445555555666665655   799999999999997743

>KOG2315|consensus

Probab=97.39  E-value=0.0043  Score=40.74  Aligned_cols=91  Identities=14%  Similarity=0.066  Sum_probs=63.0

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ...++++++++...+...+..   .+.+..+.|+|.+....+ +-|-+-..+.++|++ +.++..+.  +    +.-+++
T Consensus       249 GEq~Lyll~t~g~s~~V~L~k---~GPVhdv~W~~s~~EF~V-vyGfMPAkvtifnlr-~~~v~df~--e----gpRN~~  317 (566)
T KOG2315|consen  249 GEQTLYLLATQGESVSVPLLK---EGPVHDVTWSPSGREFAV-VYGFMPAKVTIFNLR-GKPVFDFP--E----GPRNTA  317 (566)
T ss_pred             ccceEEEEEecCceEEEecCC---CCCceEEEECCCCCEEEE-EEecccceEEEEcCC-CCEeEeCC--C----CCccce
Confidence            356778888875454333332   456788999999876433 567888889999996 55554443  2    344677


Q ss_pred             EEcCCCCEEEEecCC---CeEEEcC
Q psy17135         85 AFHPSKPFIASAGAD---GLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d---~~i~iwd  106 (106)
                      -|+|.|++++-++.+   |.+-+||
T Consensus       318 ~fnp~g~ii~lAGFGNL~G~mEvwD  342 (566)
T KOG2315|consen  318 FFNPHGNIILLAGFGNLPGDMEVWD  342 (566)
T ss_pred             EECCCCCEEEEeecCCCCCceEEEe
Confidence            899999998777755   6788887

>KOG4532|consensus

Probab=97.35  E-value=0.0093  Score=36.25  Aligned_cols=58  Identities=12%  Similarity=0.007  Sum_probs=39.8

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEEEEcCCCC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDVAFHPSKP   91 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~   91 (106)
                      ..-+..|+.....   +++++.||++.|||++. +.+.......+.-|.+.+..+.|+|.+.
T Consensus       205 ~gF~~S~s~~~~~---FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~  263 (344)
T KOG4532|consen  205 HGFYNSFSENDLQ---FAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGL  263 (344)
T ss_pred             CceeeeeccCcce---EEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCc
Confidence            3445667766666   79999999999999986 4454443322222337889999997543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.33  E-value=0.0068  Score=39.10  Aligned_cols=88  Identities=15%  Similarity=0.131  Sum_probs=50.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      +..|.++|+.+++.......   ........|+|++....+..+...+..+.++|+.++. ...+....    .......
T Consensus       212 ~~~Iyv~dl~tg~~~~lt~~---~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~----~~d~~p~  283 (419)
T PRK04043        212 KPTLYKYNLYTGKKEKIASS---QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYP----GIDVNGN  283 (419)
T ss_pred             CCEEEEEECCCCcEEEEecC---CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCC----CccCccE
Confidence            46788888888776322222   2222346789988775332333334567777887665 34444333    2233457


Q ss_pred             EcCCCCEE-EEecCCCe
Q psy17135         86 FHPSKPFI-ASAGADGL  101 (106)
Q Consensus        86 ~~~~~~~~-~s~~~d~~  101 (106)
                      |+||++.+ +++...+.
T Consensus       284 ~SPDG~~I~F~Sdr~g~  300 (419)
T PRK04043        284 FVEDDKRIVFVSDRLGY  300 (419)
T ss_pred             ECCCCCEEEEEECCCCC
Confidence            99999864 44444444

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.33  E-value=0.0029  Score=39.92  Aligned_cols=90  Identities=10%  Similarity=-0.014  Sum_probs=54.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .||.+..+|..+++.+...... ........  ...+..   ++.++.+|.+.++|..+++.+..+..+.    ..+...
T Consensus       287 ~~G~l~~~d~~tG~~~W~~~~~-~~~~~ssp--~i~g~~---l~~~~~~G~l~~~d~~tG~~~~~~~~~~----~~~~~s  356 (377)
T TIGR03300       287 ADGVVVALDRRSGSELWKNDEL-KYRQLTAP--AVVGGY---LVVGDFEGYLHWLSREDGSFVARLKTDG----SGIASP  356 (377)
T ss_pred             CCCeEEEEECCCCcEEEccccc-cCCccccC--EEECCE---EEEEeCCCEEEEEECCCCCEEEEEEcCC----CccccC
Confidence            5788888998888775443211 01111111  112333   6788899999999999999887776554    333222


Q ss_pred             EEcCCCCEEEEecCCCeEEEc
Q psy17135         85 AFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      -...+ ..++.++.||.+..|
T Consensus       357 p~~~~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       357 PVVVG-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             CEEEC-CEEEEEeCCceEEEe
Confidence            11223 357788889988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG3617|consensus

Probab=97.28  E-value=0.00068  Score=46.86  Aligned_cols=68  Identities=6%  Similarity=0.038  Sum_probs=54.7

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..++.|+|..-.   ++.|=.-|.+.+|...+.+.-.....|+    ..+..+.|||+|..+.++..-|.+.+|.
T Consensus        62 atSLCWHpe~~v---La~gwe~g~~~v~~~~~~e~htv~~th~----a~i~~l~wS~~G~~l~t~d~~g~v~lwr  129 (1416)
T KOG3617|consen   62 ATSLCWHPEEFV---LAQGWEMGVSDVQKTNTTETHTVVETHP----APIQGLDWSHDGTVLMTLDNPGSVHLWR  129 (1416)
T ss_pred             hhhhccChHHHH---HhhccccceeEEEecCCceeeeeccCCC----CCceeEEecCCCCeEEEcCCCceeEEEE
Confidence            455788887766   7888888999999876655333344566    8999999999999999999999999984

>KOG3621|consensus

Probab=97.26  E-value=0.0022  Score=43.14  Aligned_cols=97  Identities=5%  Similarity=0.021  Sum_probs=62.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-ecccc-ccCCCCe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHR-KKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~-~~~~~~v   81 (106)
                      ...|.+.+|+-..++....... ..+.....+..++....   ++.|+..|.|.++.+..+.+-.. +..+. .+|...|
T Consensus        52 sS~G~lyl~~R~~~~~~~~~~~-~~~~~~~~~~vs~~e~l---vAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rV  127 (726)
T KOG3621|consen   52 SSAGSVYLYNRHTGEMRKLKNE-GATGITCVRSVSSVEYL---VAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRV  127 (726)
T ss_pred             cccceEEEEecCchhhhccccc-CccceEEEEEecchhHh---hhhhcCCceEEeehhhccCCCcceeeccccccCCceE
Confidence            3457788888776665222111 12223344555666655   78889999999998876543221 11111 1133899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEE
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      +++.|++++..+.+|...|+|..
T Consensus       128 Tal~Ws~~~~k~ysGD~~Gkv~~  150 (726)
T KOG3621|consen  128 TALEWSKNGMKLYSGDSQGKVVL  150 (726)
T ss_pred             EEEEecccccEEeecCCCceEEE
Confidence            99999999999999999998764

>KOG1912|consensus

Probab=97.22  E-value=0.0066  Score=41.80  Aligned_cols=92  Identities=15%  Similarity=0.111  Sum_probs=63.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCc-eEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNIS-LFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .|.|.+||...+..  ....+++...+-.+.|.+..... -+++.-....++-+|+..+|+.........    ....|+
T Consensus        88 ~GrIil~d~~~~s~--~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~----~iLs~f  161 (1062)
T KOG1912|consen   88 SGRIILVDFVLASV--INWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSH----EILSCF  161 (1062)
T ss_pred             cCcEEEEEehhhhh--hhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCC----cceeee
Confidence            58899999988776  55555566666667887765544 335565666789999999998776665444    466678


Q ss_pred             EEcC-CCCEEEEecCCCeEE
Q psy17135         85 AFHP-SKPFIASAGADGLAK  103 (106)
Q Consensus        85 ~~~~-~~~~~~s~~~d~~i~  103 (106)
                      .+.| +.+.+...+..|.+.
T Consensus       162 ~~DPfd~rh~~~l~s~g~vl  181 (1062)
T KOG1912|consen  162 RVDPFDSRHFCVLGSKGFVL  181 (1062)
T ss_pred             eeCCCCcceEEEEccCceEE
Confidence            8877 666665555555543

>KOG1645|consensus

Probab=97.20  E-value=0.0022  Score=40.67  Aligned_cols=71  Identities=14%  Similarity=0.105  Sum_probs=56.0

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      ...+..+.++|..+..  +..++-+..+++.|+++..++..+..+.     .+++.+|.-+... +..|..+|-|.+||
T Consensus       193 g~~IrdlafSp~~~GL--l~~asl~nkiki~dlet~~~vssy~a~~-----~~wSC~wDlde~h~IYaGl~nG~VlvyD  264 (463)
T KOG1645|consen  193 GSFIRDLAFSPFNEGL--LGLASLGNKIKIMDLETSCVVSSYIAYN-----QIWSCCWDLDERHVIYAGLQNGMVLVYD  264 (463)
T ss_pred             chhhhhhccCccccce--eeeeccCceEEEEecccceeeeheeccC-----CceeeeeccCCcceeEEeccCceEEEEE
Confidence            3446668888887743  5778889999999999998888888774     8899999876554 66677888898886

>KOG1354|consensus

Probab=97.17  E-value=0.0036  Score=39.16  Aligned_cols=100  Identities=12%  Similarity=0.233  Sum_probs=62.3

Q ss_pred             cCCCceEEEEeCccCceee----ecccCC----------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccch
Q psy17135          3 KVPSSVIYIWTLLELQTYA----RNDCPE----------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCV   67 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~   67 (106)
                      ++..|+|++-|++...+-.    .+..+.          --+.+..+.|++.+.+   +++-.. -+|++||+.. .+++
T Consensus       232 SSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGry---ilsRDy-ltvk~wD~nme~~pv  307 (433)
T KOG1354|consen  232 SSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRY---ILSRDY-LTVKLWDLNMEAKPV  307 (433)
T ss_pred             ecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcE---EEEecc-ceeEEEeccccCCcc
Confidence            5678999999998422200    111111          0112344667777766   777765 5799999954 5667


Q ss_pred             heecccccc-------C-CCC---eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         68 QEITAHRKK-------F-DES---ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        68 ~~~~~~~~~-------~-~~~---v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++.|.-.       . .+.   -+.+.|+-++.++++|+.....++++
T Consensus       308 ~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~  357 (433)
T KOG1354|consen  308 ETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN  357 (433)
T ss_pred             eEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence            666655410       0 022   23467888888999999998888874

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.16  E-value=0.003  Score=41.59  Aligned_cols=54  Identities=9%  Similarity=0.006  Sum_probs=41.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK   64 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~   64 (106)
                      -.||.|.+||..++..  ....  ..-.+..++|+|.+..   +++|+..|.+.+||+.-.
T Consensus       278 C~DgSiiLyD~~~~~t--~~~k--a~~~P~~iaWHp~gai---~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  278 CEDGSIILYDTTRGVT--LLAK--AEFIPTLIAWHPDGAI---FVVGSEQGELQCFDMALS  331 (545)
T ss_pred             ecCCeEEEEEcCCCee--eeee--ecccceEEEEcCCCcE---EEEEcCCceEEEEEeecC
Confidence            3699999999987765  2222  1234566999999988   899999999999997644

>PRK01029 tolB translocation protein TolB; Provisional

Probab=97.15  E-value=0.012  Score=38.14  Aligned_cols=93  Identities=13%  Similarity=0.132  Sum_probs=48.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe--eCCCCcEEEeeCCCcc--chheeccccccCCCCeE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR--PGHDCSIRLWNLDNKT--CVQEITAHRKKFDESIL   82 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~v~   82 (106)
                      ..|.+.++.+++.......   ........|+|++....+...  +..+..+..|++..+.  ....+.....   ....
T Consensus       211 ~~I~~~~l~~g~~~~lt~~---~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~---~~~~  284 (428)
T PRK01029        211 PKIFLGSLENPAGKKILAL---QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAF---GTQG  284 (428)
T ss_pred             ceEEEEECCCCCceEeecC---CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCC---CCcC
Confidence            4567777776664222222   122334689999988533111  2223344557766531  2223332210   2345


Q ss_pred             EEEEcCCCCEEEEe-cCCCeEEEc
Q psy17135         83 DVAFHPSKPFIASA-GADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~~~~~~s~-~~d~~i~iw  105 (106)
                      ...|+||++.|+.. ..++...+|
T Consensus       285 ~p~wSPDG~~Laf~s~~~g~~~ly  308 (428)
T PRK01029        285 NPSFSPDGTRLVFVSNKDGRPRIY  308 (428)
T ss_pred             CeEECCCCCEEEEEECCCCCceEE
Confidence            67899999976544 455654444

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.15  E-value=0.0018  Score=28.69  Aligned_cols=27  Identities=22%  Similarity=0.378  Sum_probs=24.9

Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..|..++|+|....+|.+..+|.|.++
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~   38 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDGEVLVY   38 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEE
Confidence            578999999999999999999999876

>smart00320 WD40 WD40 repeats

Probab=97.08  E-value=0.0011  Score=26.46  Aligned_cols=29  Identities=17%  Similarity=0.386  Sum_probs=22.9

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEee
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWN   60 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd   60 (106)
                      ...+..+.|.+....   +++++.|+.+++|+
T Consensus        12 ~~~i~~~~~~~~~~~---~~~~~~d~~~~~~~   40 (40)
T smart00320       12 TGPVTSVAFSPDGKY---LASASDDGTIKLWD   40 (40)
T ss_pred             CCceeEEEECCCCCE---EEEecCCCeEEEcC
Confidence            345667888887755   79999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=97.02  E-value=0.021  Score=37.23  Aligned_cols=87  Identities=10%  Similarity=-0.008  Sum_probs=48.7

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--CcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--CSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .|.++|...... ..+..  .........|+|++....+  +...+  ..+.++|+.+++.. .+....    .......
T Consensus       199 ~l~i~d~dG~~~-~~l~~--~~~~~~~p~wSPDG~~La~--~s~~~g~~~L~~~dl~tg~~~-~lt~~~----g~~~~~~  268 (448)
T PRK04792        199 QLMIADYDGYNE-QMLLR--SPEPLMSPAWSPDGRKLAY--VSFENRKAEIFVQDIYTQVRE-KVTSFP----GINGAPR  268 (448)
T ss_pred             EEEEEeCCCCCc-eEeec--CCCcccCceECCCCCEEEE--EEecCCCcEEEEEECCCCCeE-EecCCC----CCcCCee
Confidence            566777655433 12211  1223456789999887422  22222  35788898877532 222222    2334678


Q ss_pred             EcCCCCEEE-EecCCCeEEE
Q psy17135         86 FHPSKPFIA-SAGADGLAKV  104 (106)
Q Consensus        86 ~~~~~~~~~-s~~~d~~i~i  104 (106)
                      |+|+++.++ +.+.++...+
T Consensus       269 wSPDG~~La~~~~~~g~~~I  288 (448)
T PRK04792        269 FSPDGKKLALVLSKDGQPEI  288 (448)
T ss_pred             ECCCCCEEEEEEeCCCCeEE
Confidence            999999765 4556665333

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.01  E-value=0.021  Score=39.67  Aligned_cols=87  Identities=7%  Similarity=0.092  Sum_probs=51.5

Q ss_pred             CCCceEEEEeCccCc-eeeecccCC--CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          4 VPSSVIYIWTLLELQ-TYARNDCPE--LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      .+++.+.-||.+-.. .+.......  ......++ .......   +|.|+.+|.||+||-...+....+++-.    ..
T Consensus       549 ls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~-aTt~~G~---iavgs~~G~IRLyd~~g~~AKT~lp~lG----~p  620 (794)
T PF08553_consen  549 LSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCF-ATTEDGY---IAVGSNKGDIRLYDRLGKRAKTALPGLG----DP  620 (794)
T ss_pred             ECCCceEEeccCCCCCceeeccccccccCCCceEE-EecCCce---EEEEeCCCcEEeecccchhhhhcCCCCC----CC
Confidence            466778888887432 111111100  11122222 2333334   6999999999999953323333344444    89


Q ss_pred             eEEEEEcCCCCEEEEecC
Q psy17135         81 ILDVAFHPSKPFIASAGA   98 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~   98 (106)
                      |..+..+.||+++++.+.
T Consensus       621 I~~iDvt~DGkwilaTc~  638 (794)
T PF08553_consen  621 IIGIDVTADGKWILATCK  638 (794)
T ss_pred             eeEEEecCCCcEEEEeec
Confidence            999999999999766553

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4714|consensus

Probab=97.00  E-value=0.007  Score=36.56  Aligned_cols=57  Identities=11%  Similarity=0.103  Sum_probs=43.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN   63 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~   63 (106)
                      ..||.+-+||.+....... ....|......+.|+|..+..  |+++++||.+-.||..+
T Consensus       199 t~dg~~~l~d~rn~~~p~S-~l~ahk~~i~eV~FHpk~p~~--Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  199 TDDGIVGLWDARNVAMPVS-LLKAHKAEIWEVHFHPKNPEH--LFTCSEDGSLWHWDAST  255 (319)
T ss_pred             cCCCeEEEEEcccccchHH-HHHHhhhhhhheeccCCCchh--eeEecCCCcEEEEcCCC
Confidence            4689999999998754222 223355667779999998877  78999999999999864

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=96.96  E-value=0.037  Score=35.05  Aligned_cols=66  Identities=6%  Similarity=0.013  Sum_probs=46.2

Q ss_pred             eEeeeCCCCceEEEeeC--------CCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEec-CCCeEEE
Q psy17135         35 CQTIPSSNISLFDSRPG--------HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAG-ADGLAKV  104 (106)
Q Consensus        35 ~~~~~~~~~~~~~~s~~--------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~-~d~~i~i  104 (106)
                      +.+++.+....+ +.-.        ....|-++|..+++.+..+..-     ..+..++++||++ .+.+.. .++.|.+
T Consensus       253 ia~~~dg~~lyV-~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-----~~~~~iavS~Dgkp~lyvtn~~s~~VsV  326 (352)
T TIGR02658       253 VAYHRARDRIYL-LADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-----HEIDSINVSQDAKPLLYALSTGDKTLYI  326 (352)
T ss_pred             EEEcCCCCEEEE-EecCCccccccCCCCEEEEEECCCCeEEEEEeCC-----CceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence            667777776422 1211        1247899999999988888643     4789999999999 766555 5677777


Q ss_pred             cC
Q psy17135        105 FV  106 (106)
Q Consensus       105 wd  106 (106)
                      .|
T Consensus       327 iD  328 (352)
T TIGR02658       327 FD  328 (352)
T ss_pred             EE
Confidence            65

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=96.93  E-value=0.0054  Score=35.97  Aligned_cols=64  Identities=6%  Similarity=-0.032  Sum_probs=42.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      .+|+|..+|.++|+.+.......... ...+...+.+..   +++++.++.+..||..+|+.+.....
T Consensus         1 ~~g~l~~~d~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~---v~~~~~~~~l~~~d~~tG~~~W~~~~   64 (238)
T PF13360_consen    1 DDGTLSALDPRTGKELWSYDLGPGIG-GPVATAVPDGGR---VYVASGDGNLYALDAKTGKVLWRFDL   64 (238)
T ss_dssp             -TSEEEEEETTTTEEEEEEECSSSCS-SEEETEEEETTE---EEEEETTSEEEEEETTTSEEEEEEEC
T ss_pred             CCCEEEEEECCCCCEEEEEECCCCCC-CccceEEEeCCE---EEEEcCCCEEEEEECCCCCEEEEeec
Confidence            37899999999999977776532111 111123334555   56667889999999999987655543

...

>KOG2041|consensus

Probab=96.90  E-value=0.0048  Score=42.20  Aligned_cols=69  Identities=17%  Similarity=0.256  Sum_probs=55.9

Q ss_pred             CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---------------hheeccccccCCCCeEEEEEcCCCCEEE
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---------------VQEITAHRKKFDESILDVAFHPSKPFIA   94 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~   94 (106)
                      ....++.|+..+.+   +++|+.||.+++..+.+...               -+++.+|.    ..|..+.|+...+.+.
T Consensus        15 vkL~c~~WNke~gy---IAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~----~sV~vvTWNe~~QKLT   87 (1189)
T KOG2041|consen   15 VKLHCAEWNKESGY---IACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHN----ASVMVVTWNENNQKLT   87 (1189)
T ss_pred             ceEEEEEEcccCCe---EEeccccceeEEEEccccCCcccccccccccccchhhhhccCc----ceEEEEEecccccccc
Confidence            34567889998888   89999999999987764321               12355666    8999999999888999


Q ss_pred             EecCCCeEEEc
Q psy17135         95 SAGADGLAKVF  105 (106)
Q Consensus        95 s~~~d~~i~iw  105 (106)
                      ++..+|.|.+|
T Consensus        88 tSDt~GlIiVW   98 (1189)
T KOG2041|consen   88 TSDTSGLIIVW   98 (1189)
T ss_pred             ccCCCceEEEE
Confidence            99999999998

>KOG2444|consensus

Probab=96.81  E-value=0.0085  Score=35.41  Aligned_cols=96  Identities=19%  Similarity=0.171  Sum_probs=55.0

Q ss_pred             CCCceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..+|.|.+|+..-. ....++...    .-....-.|......+..++..++.++.|+...++.+.....|..   ..+.
T Consensus        77 ~~dg~v~~~n~n~~g~~~d~~~s~----~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~---~~~e  149 (238)
T KOG2444|consen   77 TSDGAVYVFNWNLEGAHSDRVCSG----EESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF---ESGE  149 (238)
T ss_pred             cccceEEEecCCccchHHHhhhcc----cccceeccccccccceeEEeccCCceeeeccccCceeeeeccccC---CCcc
Confidence            46788888887632 221122211    111222345555544478999999999999988776655554541   2333


Q ss_pred             EEEEcCCCCEEEEe--cCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASA--GADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~--~~d~~i~iwd  106 (106)
                      ....+..+..++.+  |.|..++.|+
T Consensus       150 ~~ivv~sd~~i~~a~~S~d~~~k~W~  175 (238)
T KOG2444|consen  150 ELIVVGSDEFLKIADTSHDRVLKKWN  175 (238)
T ss_pred             eeEEecCCceEEeeccccchhhhhcc
Confidence            33334445555555  6666666664

>KOG1008|consensus

Probab=96.75  E-value=0.001  Score=44.46  Aligned_cols=93  Identities=13%  Similarity=0.185  Sum_probs=56.5

Q ss_pred             CCCceEEEEeCccC--ceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCC
Q psy17135          4 VPSSVIYIWTLLEL--QTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDE   79 (106)
Q Consensus         4 ~~d~~i~iwd~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~   79 (106)
                      .+|..+.|||+.++  .+........ .-.+...+.|......   +.+|...+.+.++|++.... ...+.  .    .
T Consensus       126 rnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~kl---vlaGm~sr~~~ifdlRqs~~~~~svn--T----k  196 (783)
T KOG1008|consen  126 RNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKL---VLAGMTSRSVHIFDLRQSLDSVSSVN--T----K  196 (783)
T ss_pred             cccCCccceecccccCCCccccccccccccCccccccccCcch---hhcccccchhhhhhhhhhhhhhhhhh--h----h
Confidence            46788999999876  3322222221 1223456777755555   78888888999999984322 11221  1    2


Q ss_pred             CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..+...| .+.++++-. |+.|.+||
T Consensus       197 ~vqG~tVdp~~~nY~cs~~-dg~iAiwD  223 (783)
T KOG1008|consen  197 YVQGITVDPFSPNYFCSNS-DGDIAIWD  223 (783)
T ss_pred             hcccceecCCCCCceeccc-cCceeecc
Confidence            334444555 555676665 99999997

>PRK01029 tolB translocation protein TolB; Provisional

Probab=96.75  E-value=0.027  Score=36.49  Aligned_cols=68  Identities=15%  Similarity=0.031  Sum_probs=39.2

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEee--CCC-ccchheeccccccCCCCeEEEEEcCCCCEEEEecCC---CeEEEcC
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWN--LDN-KTCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD---GLAKVFV  106 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd--~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~i~iwd  106 (106)
                      ....|+|++...  +.+...++..++|.  +.. +.....+....    ..+....|+|+++.++..+.+   ..+.+||
T Consensus       284 ~~p~wSPDG~~L--af~s~~~g~~~ly~~~~~~~g~~~~~lt~~~----~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~d  357 (428)
T PRK01029        284 GNPSFSPDGTRL--VFVSNKDGRPRIYIMQIDPEGQSPRLLTKKY----RNSSCPAWSPDGKKIAFCSVIKGVRQICVYD  357 (428)
T ss_pred             CCeEECCCCCEE--EEEECCCCCceEEEEECcccccceEEeccCC----CCccceeECCCCCEEEEEEcCCCCcEEEEEE
Confidence            456899998874  23344456555554  432 22233344333    456678899999987655432   2455553

>KOG2314|consensus

Probab=96.75  E-value=0.0098  Score=39.46  Aligned_cols=90  Identities=6%  Similarity=0.064  Sum_probs=56.4

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~   84 (106)
                      ..++++|-..+...-..+.........+.+.|.|.+...++.+-+|..|.+..+|.....+..+- ..|     ...+.+
T Consensus       469 k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-----~~at~v  543 (698)
T KOG2314|consen  469 KNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-----FAATEV  543 (698)
T ss_pred             ccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-----cccccc
Confidence            34667777663111011111111234677899999998655455678889999998753332222 223     467888


Q ss_pred             EEcCCCCEEEEecCCC
Q psy17135         85 AFHPSKPFIASAGADG  100 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~  100 (106)
                      .|.|.|+++++++.-.
T Consensus       544 eWDPtGRYvvT~ss~w  559 (698)
T KOG2314|consen  544 EWDPTGRYVVTSSSSW  559 (698)
T ss_pred             eECCCCCEEEEeeehh
Confidence            9999999999988544

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.72  E-value=0.066  Score=37.41  Aligned_cols=97  Identities=12%  Similarity=0.065  Sum_probs=58.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC------CCceEEEeeCCCCcEEEeeCCCcc-chheecccccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS------NISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKK   76 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~   76 (106)
                      .....|+-.|+.+|+.+.......   ......+.|..      ...  -..|-.+..+..||.+-.. .+..-..+.=.
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~---~~~v~~~~p~~K~aqlt~e~--tflGls~n~lfriDpR~~~~k~v~~~~k~Y~  575 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHD---DIPVVDIAPDSKFAQLTNEQ--TFLGLSDNSLFRIDPRLSGNKLVDSQSKQYS  575 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCC---CcceeEecccccccccCCCc--eEEEECCCceEEeccCCCCCceeeccccccc
Confidence            456778899999999877776632   12233444432      122  2456566778889998632 11111111100


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ......|++-+.+| ++|.|+.+|.||+||
T Consensus       576 ~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd  604 (794)
T PF08553_consen  576 SKNNFSCFATTEDG-YIAVGSNKGDIRLYD  604 (794)
T ss_pred             cCCCceEEEecCCc-eEEEEeCCCcEEeec
Confidence            11566777766655 689999999999996

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=96.67  E-value=0.066  Score=38.70  Aligned_cols=99  Identities=12%  Similarity=0.021  Sum_probs=59.1

Q ss_pred             CCceEEEEeCccCceeeecccC-------------CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--
Q psy17135          5 PSSVIYIWTLLELQTYARNDCP-------------ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE--   69 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~--   69 (106)
                      .++.|++||..++... .+...             ........+.+.|.+...  +++-..++.|++||+.++.....  
T Consensus       703 ~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~L--YVADs~n~~Irv~D~~tg~~~~~~g  779 (1057)
T PLN02919        703 GQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKEL--YIADSESSSIRALDLKTGGSRLLAG  779 (1057)
T ss_pred             CCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEE--EEEECCCCeEEEEECCCCcEEEEEe
Confidence            4567888888765431 11110             001123446777776642  56777789999999987542100  


Q ss_pred             -----------eccccc----cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         70 -----------ITAHRK----KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        70 -----------~~~~~~----~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                 +.....    ..-.....+++++++..+++-..+++|++||
T Consensus       780 g~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD  831 (1057)
T PLN02919        780 GDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLD  831 (1057)
T ss_pred             cccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEE
Confidence                       000000    0001335788999999999999999999886

>KOG0309|consensus

Probab=96.62  E-value=0.0035  Score=42.90  Aligned_cols=94  Identities=11%  Similarity=0.093  Sum_probs=60.4

Q ss_pred             ceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..-.+|++.... ....+..+.|...+..+.|.|.....  +++++.|..+..||++.. .++.....-.    .....+
T Consensus        91 qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdV--latcsvdt~vh~wd~rSp~~p~ys~~~w~----s~asqV  164 (1081)
T KOG0309|consen   91 QKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDV--LATCSVDTYVHAWDMRSPHRPFYSTSSWR----SAASQV  164 (1081)
T ss_pred             chhhhhhhhcCCccceEEEEecCccceeccccCCCCCcc--eeeccccccceeeeccCCCcceeeeeccc----ccCcee
Confidence            344577775321 11234444455556668888877775  899999999999999874 3444443333    466778


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +|+.-...+.+.+-.+.|++||
T Consensus       165 kwnyk~p~vlasshg~~i~vwd  186 (1081)
T KOG0309|consen  165 KWNYKDPNVLASSHGNDIFVWD  186 (1081)
T ss_pred             eecccCcchhhhccCCceEEEe
Confidence            8886444444555567788886

>KOG4640|consensus

Probab=96.51  E-value=0.019  Score=38.52  Aligned_cols=74  Identities=14%  Similarity=0.085  Sum_probs=49.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCC-eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPP-ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .+|.|.+.-+. -+.+..++.+  +..+. +.+|.|++..   ++.|-.||+|++.|+.++..+.......   ...|.+
T Consensus        40 ~~gelli~R~n-~qRlwtip~p--~~~v~~sL~W~~DGkl---laVg~kdG~I~L~Dve~~~~l~~~~~s~---e~~is~  110 (665)
T KOG4640|consen   40 EKGELLIHRLN-WQRLWTIPIP--GENVTASLCWRPDGKL---LAVGFKDGTIRLHDVEKGGRLVSFLFSV---ETDISK  110 (665)
T ss_pred             cCCcEEEEEec-cceeEeccCC--CCccceeeeecCCCCE---EEEEecCCeEEEEEccCCCceecccccc---ccchhe
Confidence            46667777776 4444444433  33334 7899999777   8999999999999999987666532222   145555


Q ss_pred             EEEc
Q psy17135         84 VAFH   87 (106)
Q Consensus        84 ~~~~   87 (106)
                      +-|.
T Consensus       111 ~~w~  114 (665)
T KOG4640|consen  111 GIWD  114 (665)
T ss_pred             eecc
Confidence            5554

>KOG2041|consensus

Probab=96.51  E-value=0.039  Score=38.13  Aligned_cols=95  Identities=12%  Similarity=0.092  Sum_probs=65.3

Q ss_pred             CCCceEEEEeCccCceeeec-------------ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135          4 VPSSVIYIWTLLELQTYARN-------------DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI   70 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~   70 (106)
                      ..||.+++..+.+...-...             ....|+..+..+.|+...+.   +.|...+|.|-+|=+-+|.-....
T Consensus        33 G~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QK---LTtSDt~GlIiVWmlykgsW~EEM  109 (1189)
T KOG2041|consen   33 GADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQK---LTTSDTSGLIIVWMLYKGSWCEEM  109 (1189)
T ss_pred             cccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccc---ccccCCCceEEEEeeecccHHHHH
Confidence            46788888777553321111             12225555556778887777   788999999999999888765554


Q ss_pred             ccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135         71 TAHRKKFDESILDVAFHPSKPFIASAGADGLAK  103 (106)
Q Consensus        71 ~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~  103 (106)
                      ...+.  .+-|.+++|+.+|..++-...||.|.
T Consensus       110 iNnRn--KSvV~SmsWn~dG~kIcIvYeDGavI  140 (1189)
T KOG2041|consen  110 INNRN--KSVVVSMSWNLDGTKICIVYEDGAVI  140 (1189)
T ss_pred             hhCcC--ccEEEEEEEcCCCcEEEEEEccCCEE
Confidence            43332  26788999999999888888887663

>KOG1275|consensus

Probab=96.50  E-value=0.025  Score=39.75  Aligned_cols=48  Identities=15%  Similarity=0.118  Sum_probs=41.1

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                      +.+|...|+|.+-|.++-+.++++.+|.    +.+.++..  .|+.|++||...
T Consensus       190 lf~G~t~G~V~LrD~~s~~~iht~~aHs----~siSDfDv--~GNlLitCG~S~  237 (1118)
T KOG1275|consen  190 LFCGDTRGTVFLRDPNSFETIHTFDAHS----GSISDFDV--QGNLLITCGYSM  237 (1118)
T ss_pred             EEeecccceEEeecCCcCceeeeeeccc----cceeeeec--cCCeEEEeeccc
Confidence            7899999999999999999999999998    77776544  688999998554

>KOG2314|consensus

Probab=96.47  E-value=0.018  Score=38.34  Aligned_cols=81  Identities=12%  Similarity=0.109  Sum_probs=50.3

Q ss_pred             ceEEEEeCccCceeeecccCCCC-CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELN-SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ..++|||+.+|.....+...... ..-....|+.++.+   ++.-.. ..+.|++...-.++..-.-.-    .+|....
T Consensus       282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy---~Arm~~-~sisIyEtpsf~lld~Kslki----~gIr~Fs  353 (698)
T KOG2314|consen  282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKY---FARMTG-NSISIYETPSFMLLDKKSLKI----SGIRDFS  353 (698)
T ss_pred             ceEEEEEccccchhcceeccCCCccccceEEeccCCce---eEEecc-ceEEEEecCceeeecccccCC----ccccCcc
Confidence            57999999999997777764222 12334677777776   555544 468888876532221111122    5677778


Q ss_pred             EcCCCCEEEE
Q psy17135         86 FHPSKPFIAS   95 (106)
Q Consensus        86 ~~~~~~~~~s   95 (106)
                      |+|.+..||-
T Consensus       354 wsP~~~llAY  363 (698)
T KOG2314|consen  354 WSPTSNLLAY  363 (698)
T ss_pred             cCCCcceEEE
Confidence            8887776654

>KOG0882|consensus

Probab=96.43  E-value=0.028  Score=36.53  Aligned_cols=99  Identities=12%  Similarity=0.050  Sum_probs=66.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC------ccchheecccc----
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN------KTCVQEITAHR----   74 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~------~~~~~~~~~~~----   74 (106)
                      .++.|.++|-....+........|.+.+....+++.+..   +++....|.|.-|....      ......+....    
T Consensus       120 ~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds---~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~  196 (558)
T KOG0882|consen  120 KSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDS---AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYG  196 (558)
T ss_pred             cCCCcEEECCcCCcCccceecccccCceEEEEeeccccc---eeeccccceeEeecCCCcccCccccccccccccchhhc
Confidence            467788888765554333333345666777888888887   78888889999998763      11100111000    


Q ss_pred             -ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 -KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 -~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       .+......++.|+|++..+.+-+.|..|++++
T Consensus       197 f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~  229 (558)
T KOG0882|consen  197 FPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFV  229 (558)
T ss_pred             ccccccCccceEEccccCcccccCcccEEEEEE
Confidence             01125677899999999999999999998863

>KOG1354|consensus

Probab=96.41  E-value=0.0067  Score=38.01  Aligned_cols=99  Identities=20%  Similarity=0.186  Sum_probs=57.8

Q ss_pred             CCceEEEEeCcc-CceeeecccC-----CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc----hheecccc
Q psy17135          5 PSSVIYIWTLLE-LQTYARNDCP-----ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC----VQEITAHR   74 (106)
Q Consensus         5 ~d~~i~iwd~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~----~~~~~~~~   74 (106)
                      .|=.|.+|++.- .+........     .-...+.+..|+|..-..  ++-.+..|+|++.|++....    .+.+..+.
T Consensus       183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~--f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe  260 (433)
T KOG1354|consen  183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNV--FVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE  260 (433)
T ss_pred             cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccE--EEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence            455678888753 2222211111     111235567788865443  56677889999999985432    11111111


Q ss_pred             c---c-----CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 K---K-----FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~---~-----~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .   +     .-..|..+.|+++|+++++-. --++++||
T Consensus       261 dp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD  299 (433)
T KOG1354|consen  261 DPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWD  299 (433)
T ss_pred             CCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEe
Confidence            0   0     014677899999999988753 36788887

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=96.40  E-value=0.053  Score=31.78  Aligned_cols=93  Identities=9%  Similarity=-0.047  Sum_probs=51.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~   83 (106)
                      .++.|..||..+|+.+.+......   ..... ...+..   ++.+..++.+..+|..+|+.+... ....... .....
T Consensus        44 ~~~~l~~~d~~tG~~~W~~~~~~~---~~~~~-~~~~~~---v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~-~~~~~  115 (238)
T PF13360_consen   44 GDGNLYALDAKTGKVLWRFDLPGP---ISGAP-VVDGGR---VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA-GVRSS  115 (238)
T ss_dssp             TTSEEEEEETTTSEEEEEEECSSC---GGSGE-EEETTE---EEEEETTSEEEEEETTTSCEEEEEEE-SSCTC-STB--
T ss_pred             CCCEEEEEECCCCCEEEEeecccc---cccee-eecccc---cccccceeeeEecccCCcceeeeecccccccc-ccccc
Confidence            678999999999998777766321   11111 222333   345556779999999999887763 3221000 11111


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ......+..++.+..++.+..+
T Consensus       116 ~~~~~~~~~~~~~~~~g~l~~~  137 (238)
T PF13360_consen  116 SSPAVDGDRLYVGTSSGKLVAL  137 (238)
T ss_dssp             SEEEEETTEEEEEETCSEEEEE
T ss_pred             cCceEecCEEEEEeccCcEEEE
Confidence            1222225555565556665544

...

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.22  E-value=0.071  Score=33.11  Aligned_cols=86  Identities=12%  Similarity=0.054  Sum_probs=57.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee-----CCCCcEEEeeCC-CccchheeccccccC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP-----GHDCSIRLWNLD-NKTCVQEITAHRKKF   77 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----~~d~~v~iwd~~-~~~~~~~~~~~~~~~   77 (106)
                      .+-....++|..+++....+..+...--..-..|++++..   |.+.     ...|.|-+||.. +-+.+.++..+.   
T Consensus        25 RPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~---LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~G---   98 (305)
T PF07433_consen   25 RPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRL---LYTTENDYETGRGVIGVYDAARGYRRIGEFPSHG---   98 (305)
T ss_pred             CCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCE---EEEeccccCCCcEEEEEEECcCCcEEEeEecCCC---
Confidence            3455678999999988665544321111122568888887   5554     345789999998 345677777666   


Q ss_pred             CCCeEEEEEcCCCCEEEEe
Q psy17135         78 DESILDVAFHPSKPFIASA   96 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~   96 (106)
                       -.-..+.+.|++..|+.+
T Consensus        99 -IGPHel~l~pDG~tLvVA  116 (305)
T PF07433_consen   99 -IGPHELLLMPDGETLVVA  116 (305)
T ss_pred             -cChhhEEEcCCCCEEEEE
Confidence             566778889999776655

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.18  E-value=0.053  Score=35.25  Aligned_cols=89  Identities=17%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEE--EeeCCCccchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIR--LWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~--iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..+.++|+.+++........   .....-.|+|++...  +++...|+...  +.|+.++. +..+....    ..-..-
T Consensus       218 ~~i~~~~l~~g~~~~i~~~~---g~~~~P~fspDG~~l--~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~----gi~~~P  287 (425)
T COG0823         218 PRIYYLDLNTGKRPVILNFN---GNNGAPAFSPDGSKL--AFSSSRDGSPDIYLMDLDGKN-LPRLTNGF----GINTSP  287 (425)
T ss_pred             ceEEEEeccCCccceeeccC---CccCCccCCCCCCEE--EEEECCCCCccEEEEcCCCCc-ceecccCC----ccccCc
Confidence            46888999988874444432   223445688998776  45666666655  44666655 33344333    222355


Q ss_pred             EEcCCCCEE-EEecCCCeEEEc
Q psy17135         85 AFHPSKPFI-ASAGADGLAKVF  105 (106)
Q Consensus        85 ~~~~~~~~~-~s~~~d~~i~iw  105 (106)
                      .|+|+|+.+ +++++.|.-.+|
T Consensus       288 s~spdG~~ivf~Sdr~G~p~I~  309 (425)
T COG0823         288 SWSPDGSKIVFTSDRGGRPQIY  309 (425)
T ss_pred             cCCCCCCEEEEEeCCCCCcceE
Confidence            789999985 555566654443

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=96.18  E-value=0.14  Score=32.28  Aligned_cols=96  Identities=19%  Similarity=0.244  Sum_probs=54.4

Q ss_pred             CCCceEEEEeCc--cCce--eeeccc-CC-C--CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC--ccc--hheec
Q psy17135          4 VPSSVIYIWTLL--ELQT--YARNDC-PE-L--NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN--KTC--VQEIT   71 (106)
Q Consensus         4 ~~d~~i~iwd~~--~~~~--~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~--~~~--~~~~~   71 (106)
                      .-+++|.++++.  ++..  +..... +. .  ......+..+|++...  +++...+..|.+|+++.  ++.  +..+.
T Consensus       211 e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~l--yvsnr~~~sI~vf~~d~~~g~l~~~~~~~  288 (345)
T PF10282_consen  211 ELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFL--YVSNRGSNSISVFDLDPATGTLTLVQTVP  288 (345)
T ss_dssp             TTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEE--EEEECTTTEEEEEEECTTTTTEEEEEEEE
T ss_pred             CCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEE--EEEeccCCEEEEEEEecCCCceEEEEEEe
Confidence            346778888887  3322  111111 10 1  1123346777777663  45566677899999843  332  22333


Q ss_pred             cccccCCCCeEEEEEcCCCCEEEEec-CCCeEEEc
Q psy17135         72 AHRKKFDESILDVAFHPSKPFIASAG-ADGLAKVF  105 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iw  105 (106)
                      ...    .....+.++|++++++.+. .++.|.+|
T Consensus       289 ~~G----~~Pr~~~~s~~g~~l~Va~~~s~~v~vf  319 (345)
T PF10282_consen  289 TGG----KFPRHFAFSPDGRYLYVANQDSNTVSVF  319 (345)
T ss_dssp             ESS----SSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred             CCC----CCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence            222    4578899999999977665 55677766

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=96.17  E-value=0.14  Score=32.38  Aligned_cols=60  Identities=7%  Similarity=-0.084  Sum_probs=38.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT   71 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~   71 (106)
                      .++.|..+|..+|+.+-..........  ..  ...+..   ++.++.++.+..+|..+|+.+....
T Consensus        73 ~~g~v~a~d~~tG~~~W~~~~~~~~~~--~p--~v~~~~---v~v~~~~g~l~ald~~tG~~~W~~~  132 (377)
T TIGR03300        73 ADGTVVALDAETGKRLWRVDLDERLSG--GV--GADGGL---VFVGTEKGEVIALDAEDGKELWRAK  132 (377)
T ss_pred             CCCeEEEEEccCCcEeeeecCCCCccc--ce--EEcCCE---EEEEcCCCEEEEEECCCCcEeeeec
Confidence            467899999999988665554321111  11  112333   5677888999999999988765443

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2066|consensus

Probab=96.16  E-value=0.022  Score=39.23  Aligned_cols=55  Identities=16%  Similarity=0.235  Sum_probs=42.9

Q ss_pred             ceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCC-----CCEEEEecCCCeEEE
Q psy17135         44 SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPS-----KPFIASAGADGLAKV  104 (106)
Q Consensus        44 ~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~s~~~d~~i~i  104 (106)
                      +.+++||+.||+|.|-.+.+.+...++.-+     ..+.+++++|+     .+.+++|+..| +.+
T Consensus        83 Gey~asCS~DGkv~I~sl~~~~~~~~~df~-----rpiksial~Pd~~~~~sk~fv~GG~ag-lvL  142 (846)
T KOG2066|consen   83 GEYVASCSDDGKVVIGSLFTDDEITQYDFK-----RPIKSIALHPDFSRQQSKQFVSGGMAG-LVL  142 (846)
T ss_pred             CceEEEecCCCcEEEeeccCCccceeEecC-----CcceeEEeccchhhhhhhheeecCcce-EEE
Confidence            334899999999999999888877666655     47888999987     45688888777 544

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.13  E-value=0.077  Score=28.00  Aligned_cols=52  Identities=25%  Similarity=0.213  Sum_probs=37.9

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |+.|+.|..|++|+-.  ..+..+...     ..+..+.-... ..++.+..+|+|-+|+
T Consensus        18 LlvGs~D~~IRvf~~~--e~~~Ei~e~-----~~v~~L~~~~~-~~F~Y~l~NGTVGvY~   69 (111)
T PF14783_consen   18 LLVGSDDFEIRVFKGD--EIVAEITET-----DKVTSLCSLGG-GRFAYALANGTVGVYD   69 (111)
T ss_pred             EEEecCCcEEEEEeCC--cEEEEEecc-----cceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence            7899999999998653  455556544     46777766554 5688888899887664

>KOG1832|consensus

Probab=96.05  E-value=0.012  Score=41.37  Aligned_cols=63  Identities=10%  Similarity=0.069  Sum_probs=52.2

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                      ++....++.|+.....   ++.|+..|.|+++++.+|........|.    ..++.+.-+.+|..+.+.+
T Consensus      1100 ~~~~fTc~afs~~~~h---L~vG~~~Geik~~nv~sG~~e~s~ncH~----SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGTNH---LAVGSHAGEIKIFNVSSGSMEESVNCHQ----SAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred             cccceeeEEeecCCce---EEeeeccceEEEEEccCccccccccccc----cccccccccCCcceeeeec
Confidence            4556677888887777   8999999999999999999888888888    8899888888888755544

>KOG1912|consensus

Probab=95.90  E-value=0.04  Score=38.26  Aligned_cols=98  Identities=10%  Similarity=0.051  Sum_probs=66.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEE------EeeCCCCcEEEeeCCCcc--chheeccccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFD------SRPGHDCSIRLWNLDNKT--CVQEITAHRK   75 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~s~~~d~~v~iwd~~~~~--~~~~~~~~~~   75 (106)
                      .++|+|.++|+.++.....+.  .|.+.+..+.|........+-      ++++.-..+.+=|+++|.  ..+.++... 
T Consensus       444 T~sGTV~vvdvst~~v~~~fs--vht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~d-  520 (1062)
T KOG1912|consen  444 TNSGTVDVVDVSTNAVAASFS--VHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPD-  520 (1062)
T ss_pred             cCCceEEEEEecchhhhhhhc--ccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCC-
Confidence            468999999999988733343  356667777776655542110      122222345677888874  344444444 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        +..|..+..|..+++++....+.-+-+||
T Consensus       521 --espI~~irvS~~~~yLai~Fr~~plEiwd  549 (1062)
T KOG1912|consen  521 --ESPIRAIRVSSSGRYLAILFRREPLEIWD  549 (1062)
T ss_pred             --cCcceeeeecccCceEEEEecccchHHHh
Confidence              27899999999999999999988888886

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=95.87  E-value=0.016  Score=36.08  Aligned_cols=72  Identities=18%  Similarity=0.145  Sum_probs=44.9

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------hheecccc------ccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------VQEITAHR------KKFDESILDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------~~~~~~~~------~~~~~~v~~~~~~~~~~~~~s~~~d   99 (106)
                      +.+..|+|..-..  +.-.+..|.|++.|++....      +.......      ......|..+.|+++|+++++-. -
T Consensus       224 ItSaeFhp~~cn~--fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-y  300 (460)
T COG5170         224 ITSAEFHPEMCNV--FMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-Y  300 (460)
T ss_pred             HhhcccCHhHcce--EEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-c
Confidence            4556777765442  45567789999999985421      11111000      00115678899999999988764 3


Q ss_pred             CeEEEcC
Q psy17135        100 GLAKVFV  106 (106)
Q Consensus       100 ~~i~iwd  106 (106)
                      -++++||
T Consensus       301 ltvkiwD  307 (460)
T COG5170         301 LTVKIWD  307 (460)
T ss_pred             ceEEEEe
Confidence            5788886

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=95.85  E-value=0.19  Score=32.20  Aligned_cols=89  Identities=8%  Similarity=-0.055  Sum_probs=49.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE-
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD-   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~-   83 (106)
                      .++.+...|..+++.+-........ ......  -.+..   ++.++.+|.+.+.|..+|+.+.......    ..+.. 
T Consensus       302 ~~g~l~ald~~tG~~~W~~~~~~~~-~~~sp~--v~~g~---l~v~~~~G~l~~ld~~tG~~~~~~~~~~----~~~~s~  371 (394)
T PRK11138        302 QNDRVYALDTRGGVELWSQSDLLHR-LLTAPV--LYNGY---LVVGDSEGYLHWINREDGRFVAQQKVDS----SGFLSE  371 (394)
T ss_pred             CCCeEEEEECCCCcEEEcccccCCC-cccCCE--EECCE---EEEEeCCCEEEEEECCCCCEEEEEEcCC----CcceeC
Confidence            4566777777777653322211000 000000  01233   5678889999999999998776654433    22322 


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..+  .+..++.++.||.+..+
T Consensus       372 P~~--~~~~l~v~t~~G~l~~~  391 (394)
T PRK11138        372 PVV--ADDKLLIQARDGTVYAI  391 (394)
T ss_pred             CEE--ECCEEEEEeCCceEEEE
Confidence            112  24467777889988765

>PRK02888 nitrous-oxide reductase; Validated

Probab=95.73  E-value=0.26  Score=33.68  Aligned_cols=48  Identities=6%  Similarity=0.063  Sum_probs=31.4

Q ss_pred             CcEEEeeCCC-----ccchheeccccccCCCCeEEEEEcCCCCEEEE-ecCCCeEEEcC
Q psy17135         54 CSIRLWNLDN-----KTCVQEITAHRKKFDESILDVAFHPSKPFIAS-AGADGLAKVFV  106 (106)
Q Consensus        54 ~~v~iwd~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s-~~~d~~i~iwd  106 (106)
                      +.|.+.|..+     .+.+..+...     .....+.++||+++++. +..+.++.+.|
T Consensus       296 n~V~VID~~t~~~~~~~v~~yIPVG-----KsPHGV~vSPDGkylyVanklS~tVSVID  349 (635)
T PRK02888        296 SKVPVVDGRKAANAGSALTRYVPVP-----KNPHGVNTSPDGKYFIANGKLSPTVTVID  349 (635)
T ss_pred             CEEEEEECCccccCCcceEEEEECC-----CCccceEECCCCCEEEEeCCCCCcEEEEE
Confidence            4577777776     2344444433     46688999999998654 44577777654

>PRK02888 nitrous-oxide reductase; Validated

Probab=95.66  E-value=0.33  Score=33.25  Aligned_cols=92  Identities=11%  Similarity=-0.025  Sum_probs=63.5

Q ss_pred             CCceEEEEeCcc-----CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------------h
Q psy17135          5 PSSVIYIWTLLE-----LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------------V   67 (106)
Q Consensus         5 ~d~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------------~   67 (106)
                      +++.|.+.|..+     .+.+.....   ......+..+|++.+.  ++++..+.+|.+.|+.+.+.            .
T Consensus       294 ~gn~V~VID~~t~~~~~~~v~~yIPV---GKsPHGV~vSPDGkyl--yVanklS~tVSVIDv~k~k~~~~~~~~~~~~vv  368 (635)
T PRK02888        294 GGSKVPVVDGRKAANAGSALTRYVPV---PKNPHGVNTSPDGKYF--IANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVV  368 (635)
T ss_pred             CCCEEEEEECCccccCCcceEEEEEC---CCCccceEECCCCCEE--EEeCCCCCcEEEEEChhhhhhhhccCCccceEE
Confidence            457799999887     333333333   2346668889999885  67788899999999987543            1


Q ss_pred             heeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         68 QEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        68 ~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+...     ...-...+|.++|..+.|..-|..|.-|+
T Consensus       369 aevev-----GlGPLHTaFDg~G~aytslf~dsqv~kwn  402 (635)
T PRK02888        369 AEPEL-----GLGPLHTAFDGRGNAYTTLFLDSQIVKWN  402 (635)
T ss_pred             Eeecc-----CCCcceEEECCCCCEEEeEeecceeEEEe
Confidence            11111     13445668888888888888898888885

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.52  E-value=0.039  Score=24.44  Aligned_cols=32  Identities=13%  Similarity=0.125  Sum_probs=26.4

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC   66 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~   66 (106)
                      .+..+.|+|....   ++.+..+|.|.++.+ +++.
T Consensus        13 ~v~~~~w~P~mdL---iA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   13 RVSCMSWCPTMDL---IALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             cEEEEEECCCCCE---EEEEECCCeEEEEEC-CCcC
Confidence            4667899998887   899999999999988 5543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=95.50  E-value=0.39  Score=31.30  Aligned_cols=82  Identities=11%  Similarity=0.088  Sum_probs=46.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ++..|.++|+.+++. .++...  ........|+|++....|  +....+  .|.+.|+.+++..+... ..    ..  
T Consensus       255 g~~~Iy~~dl~~g~~-~~LT~~--~~~d~~p~~SPDG~~I~F--~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g----~~--  322 (419)
T PRK04043        255 GQPDIYLYDTNTKTL-TQITNY--PGIDVNGNFVEDDKRIVF--VSDRLGYPNIFMKKLNSGSVEQVVF-HG----KN--  322 (419)
T ss_pred             CCcEEEEEECCCCcE-EEcccC--CCccCccEECCCCCEEEE--EECCCCCceEEEEECCCCCeEeCcc-CC----Cc--
Confidence            456788889887764 233221  112334579999887544  332233  56777887765422222 12    11  


Q ss_pred             EEEEcCCCCEEEEecC
Q psy17135         83 DVAFHPSKPFIASAGA   98 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~   98 (106)
                      ...|+|+++.++-.+.
T Consensus       323 ~~~~SPDG~~Ia~~~~  338 (419)
T PRK04043        323 NSSVSTYKNYIVYSSR  338 (419)
T ss_pred             CceECCCCCEEEEEEc
Confidence            2489999998765553

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=95.39  E-value=0.37  Score=30.45  Aligned_cols=94  Identities=15%  Similarity=0.206  Sum_probs=56.5

Q ss_pred             CCceEEEEeCcc-CceeeecccCCCCC----------CCCeeEeeeCCCCceEEEee--CCCCcEEEeeCCCccchhee-
Q psy17135          5 PSSVIYIWTLLE-LQTYARNDCPELNS----------EPPACQTIPSSNISLFDSRP--GHDCSIRLWNLDNKTCVQEI-   70 (106)
Q Consensus         5 ~d~~i~iwd~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~s~--~~d~~v~iwd~~~~~~~~~~-   70 (106)
                      ..|.|.++-++. |..........|..          ......+.|.+..   ++++  +.| .|.+|++..|+....- 
T Consensus       109 ~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~---l~v~DLG~D-ri~~y~~~dg~L~~~~~  184 (346)
T COG2706         109 HSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRY---LVVPDLGTD-RIFLYDLDDGKLTPADP  184 (346)
T ss_pred             cCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCE---EEEeecCCc-eEEEEEcccCccccccc
Confidence            457788888865 33322211111111          2556677777776   4444  555 4889999977643222 


Q ss_pred             -ccccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEc
Q psy17135         71 -TAHRKKFDESILDVAFHPSKPFI-ASAGADGLAKVF  105 (106)
Q Consensus        71 -~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iw  105 (106)
                       ...+   ..+-..+.|+|++++. +.+=-+++|-+|
T Consensus       185 ~~v~~---G~GPRHi~FHpn~k~aY~v~EL~stV~v~  218 (346)
T COG2706         185 AEVKP---GAGPRHIVFHPNGKYAYLVNELNSTVDVL  218 (346)
T ss_pred             cccCC---CCCcceEEEcCCCcEEEEEeccCCEEEEE
Confidence             2222   2678899999999984 445567777766

>KOG1920|consensus

Probab=95.34  E-value=0.25  Score=36.03  Aligned_cols=93  Identities=10%  Similarity=0.110  Sum_probs=56.8

Q ss_pred             CCC-ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee---CCCCcEEEeeCCCccchhe--eccccccC
Q psy17135          4 VPS-SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP---GHDCSIRLWNLDNKTCVQE--ITAHRKKF   77 (106)
Q Consensus         4 ~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~d~~v~iwd~~~~~~~~~--~~~~~~~~   77 (106)
                      .++ ..|++||-. |.+...-...  ...-.++.|-|.+..   +++.   ..|+.|.+|.-+ |-.-..  ++....  
T Consensus       218 ~~~~RkirV~drE-g~Lns~se~~--~~l~~~LsWkPsgs~---iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~d--  288 (1265)
T KOG1920|consen  218 ETGTRKIRVYDRE-GALNSTSEPV--EGLQHSLSWKPSGSL---IAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLD--  288 (1265)
T ss_pred             cCCceeEEEeccc-chhhcccCcc--cccccceeecCCCCe---EeeeeecCCCCcEEEEecC-CccccccccCCccc--
Confidence            344 789999987 5552222221  233466889997777   4443   455678888653 322121  111221  


Q ss_pred             CCCeEEEEEcCCCCEEEE---ecCCCeEEEc
Q psy17135         78 DESILDVAFHPSKPFIAS---AGADGLAKVF  105 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s---~~~d~~i~iw  105 (106)
                      ...+..++|+.++..|+.   +.....|++|
T Consensus       289 e~~ve~L~Wns~sdiLAv~~~~~e~~~v~lw  319 (1265)
T KOG1920|consen  289 EKEVEELAWNSNSDILAVVTSNLENSLVQLW  319 (1265)
T ss_pred             ccchheeeecCCCCceeeeecccccceEEEE
Confidence            134889999999998877   5566668888

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.31  E-value=0.31  Score=28.92  Aligned_cols=66  Identities=12%  Similarity=0.084  Sum_probs=43.0

Q ss_pred             eeeCCCCceEEEeeCCCCcEEEeeCCCccchhee------cccc----ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         37 TIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI------TAHR----KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        37 ~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~------~~~~----~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ....+..   +++...+|.+++||+.+++++..-      -...    ......|..+.++.+|..+++-+ +|..+.|+
T Consensus        18 l~~~~~~---Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~   93 (219)
T PF07569_consen   18 LECNGSY---LLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS   93 (219)
T ss_pred             EEeCCCE---EEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence            3444555   778888999999999988653221      1110    01126788888998888877765 46666664

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=95.25  E-value=0.42  Score=30.22  Aligned_cols=96  Identities=16%  Similarity=0.115  Sum_probs=56.1

Q ss_pred             CcCCCceEEEEeCccCce-eeecccCCCCCCCCeeEeeeCCCCceEEEee---CCCCcEEEeeCCC--ccc--hheeccc
Q psy17135          2 QKVPSSVIYIWTLLELQT-YARNDCPELNSEPPACQTIPSSNISLFDSRP---GHDCSIRLWNLDN--KTC--VQEITAH   73 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~d~~v~iwd~~~--~~~--~~~~~~~   73 (106)
                      |+..+.-|+.|++.+.+- +.....-.......-+.+.|....   |.++   +.++.|-.|.++.  |..  +......
T Consensus        11 T~~~s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~---LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~   87 (346)
T COG2706          11 TKRESQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRH---LYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLP   87 (346)
T ss_pred             cccCCCceEEEEEeCcccccchhhhccccCCCceEEECCCCCE---EEEEEecCCcCcEEEEEEcCCCCeEEEeeccccC
Confidence            345677899999984322 112222222334556888888776   4554   3457777776664  542  2222222


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCC-CeEEE
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGAD-GLAKV  104 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d-~~i~i  104 (106)
                      .    ..-+.+++++++++++++... +.|.+
T Consensus        88 g----~~p~yvsvd~~g~~vf~AnY~~g~v~v  115 (346)
T COG2706          88 G----SPPCYVSVDEDGRFVFVANYHSGSVSV  115 (346)
T ss_pred             C----CCCeEEEECCCCCEEEEEEccCceEEE
Confidence            2    344888999999998887744 44444

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=95.23  E-value=0.21  Score=35.81  Aligned_cols=67  Identities=19%  Similarity=0.200  Sum_probs=46.0

Q ss_pred             CCCCeeEeeeCCCCceEEEeeCCCCcEEEe----eCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGHDCSIRLW----NLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iw----d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      ..+..+.|.+....   ++.+..+|.|-+.    +..+..  -.+-+.-   ..+|.+.+||||+..++-...++++.+
T Consensus        76 ~~ivs~~yl~d~~~---l~~~~~~Gdi~~~~~~~~~~~~~--~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~~l~~  146 (928)
T PF04762_consen   76 DKIVSFQYLADSES---LCIALASGDIILVREDPDPDEDE--IEIVGSV---DSGILAASWSPDEELLALVTGEGNLLL  146 (928)
T ss_pred             CcEEEEEeccCCCc---EEEEECCceEEEEEccCCCCCce--eEEEEEE---cCcEEEEEECCCcCEEEEEeCCCEEEE
Confidence            34666777777777   6777778888887    333322  2222222   179999999999999888887877654

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=95.19  E-value=0.054  Score=33.07  Aligned_cols=28  Identities=14%  Similarity=0.379  Sum_probs=26.5

Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|..+..|||+..|++...+|.+.+|+
T Consensus       230 d~i~kmSlSPdg~~La~ih~sG~lsLW~  257 (282)
T PF15492_consen  230 DGIFKMSLSPDGSLLACIHFSGSLSLWE  257 (282)
T ss_pred             CceEEEEECCCCCEEEEEEcCCeEEEEe
Confidence            6889999999999999999999999995

>KOG2079|consensus

Probab=95.05  E-value=0.062  Score=38.49  Aligned_cols=57  Identities=12%  Similarity=0.109  Sum_probs=42.6

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.|+..|.+...|+...-.-..-..+.   ..+|.+++|+.+|..++.|-.+|-|.+||
T Consensus       102 ivi~Ts~ghvl~~d~~~nL~~~~~ne~v---~~~Vtsvafn~dg~~l~~G~~~G~V~v~D  158 (1206)
T KOG2079|consen  102 IVIGTSHGHVLLSDMTGNLGPLHQNERV---QGPVTSVAFNQDGSLLLAGLGDGHVTVWD  158 (1206)
T ss_pred             EEEEcCchhhhhhhhhcccchhhcCCcc---CCcceeeEecCCCceeccccCCCcEEEEE
Confidence            5777888888888876431111112222   27899999999999999999999999997

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=95.03  E-value=0.41  Score=30.21  Aligned_cols=92  Identities=15%  Similarity=0.201  Sum_probs=53.4

Q ss_pred             CceEEEEeC--ccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----CCCcEEEeeCCCc--c--chheeccccc
Q psy17135          6 SSVIYIWTL--LELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----HDCSIRLWNLDNK--T--CVQEITAHRK   75 (106)
Q Consensus         6 d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----~d~~v~iwd~~~~--~--~~~~~~~~~~   75 (106)
                      .+.|..|++  .+++........ .......+.++|.+..   |.+..    .++.|..|.+...  +  .+....... 
T Consensus        12 ~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~---LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g-   86 (345)
T PF10282_consen   12 GGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRR---LYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGG-   86 (345)
T ss_dssp             STEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSE---EEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESS-
T ss_pred             CCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCE---EEEEEccccCCCCEEEEEECCCcceeEEeeeeccCC-
Confidence            477888888  444442222111 1223444666776655   44443    4678988887753  3  223332222 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEec-CCCeEEEc
Q psy17135         76 KFDESILDVAFHPSKPFIASAG-ADGLAKVF  105 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iw  105 (106)
                         .....++++|++++++++. .++.+.++
T Consensus        87 ---~~p~~i~~~~~g~~l~vany~~g~v~v~  114 (345)
T PF10282_consen   87 ---SSPCHIAVDPDGRFLYVANYGGGSVSVF  114 (345)
T ss_dssp             ---SCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ---CCcEEEEEecCCCEEEEEEccCCeEEEE
Confidence               5667899999999877766 46777654

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2395|consensus

Probab=94.99  E-value=0.46  Score=31.95  Aligned_cols=98  Identities=8%  Similarity=0.026  Sum_probs=52.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceE----EEeeCCCCcEEEeeCCC-cc-chheeccccccCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLF----DSRPGHDCSIRLWNLDN-KT-CVQEITAHRKKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~s~~~d~~v~iwd~~~-~~-~~~~~~~~~~~~~   78 (106)
                      +-..++-.|+.+|+.+......   ..+..+.+.|.....++    -+.|-.+..|+-||++- ++ .+...+.|.=...
T Consensus       354 ~~~~l~klDIE~GKIVeEWk~~---~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k  430 (644)
T KOG2395|consen  354 EQDKLYKLDIERGKIVEEWKFE---DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTK  430 (644)
T ss_pred             CcCcceeeecccceeeeEeecc---CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccc
Confidence            3345666777777776555552   22334444443322111    12355567788899883 22 2222222210001


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ....|.+-..+| +++.||.+|.|++||
T Consensus       431 ~nFsc~aTT~sG-~IvvgS~~GdIRLYd  457 (644)
T KOG2395|consen  431 NNFSCFATTESG-YIVVGSLKGDIRLYD  457 (644)
T ss_pred             cccceeeecCCc-eEEEeecCCcEEeeh
Confidence            345555555444 789999999999986

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=94.97  E-value=0.082  Score=33.07  Aligned_cols=97  Identities=10%  Similarity=0.154  Sum_probs=55.9

Q ss_pred             CCcCCCceEEEEeCccCce-ee---ecccCC----------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-c
Q psy17135          1 MQKVPSSVIYIWTLLELQT-YA---RNDCPE----------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-T   65 (106)
Q Consensus         1 ~~~~~d~~i~iwd~~~~~~-~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~   65 (106)
                      |-+...|.|++-|++.... ..   .+....          ..+.+....|++.+.+   +++-.. -+|++||.+.. .
T Consensus       238 mYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngry---IlsRdy-ltvkiwDvnm~k~  313 (460)
T COG5170         238 MYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRY---ILSRDY-LTVKIWDVNMAKN  313 (460)
T ss_pred             EEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcE---EEEecc-ceEEEEecccccC
Confidence            4467789999999973211 00   111100          1122344677777766   677665 47999999875 4


Q ss_pred             chheecccccc-------C-CCCe---EEEEEcCCCCEEEEecCCCe
Q psy17135         66 CVQEITAHRKK-------F-DESI---LDVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        66 ~~~~~~~~~~~-------~-~~~v---~~~~~~~~~~~~~s~~~d~~  101 (106)
                      ++++++-|...       . .+.|   +.+.||.+...+.+|+....
T Consensus       314 pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NN  360 (460)
T COG5170         314 PIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNN  360 (460)
T ss_pred             CceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccc
Confidence            67776544310       0 0233   34677777777777775543

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=94.93  E-value=0.2  Score=32.75  Aligned_cols=95  Identities=18%  Similarity=0.182  Sum_probs=47.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEee--eCCCCceEEEeeCCCCcEEEeeC-CCcc----chheecc------
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTI--PSSNISLFDSRPGHDCSIRLWNL-DNKT----CVQEITA------   72 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~d~~v~iwd~-~~~~----~~~~~~~------   72 (106)
                      -.++.+||+.+.+.+..+...........+.|.  |....+  ++.+.-..+|..|-- +.+.    .+-++..      
T Consensus       221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g--Fvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~  298 (461)
T PF05694_consen  221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG--FVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGW  298 (461)
T ss_dssp             --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE--EEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS
T ss_pred             cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce--EEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcc
Confidence            357999999999998887775322223335553  444444  455544555555533 2231    1111211      


Q ss_pred             -----------ccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         73 -----------HRKKFDESILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        73 -----------~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                                 -+    .-++.+.+|.|.++| +++--+|.++.||
T Consensus       299 ~lp~ml~~~~~~P----~LitDI~iSlDDrfLYvs~W~~GdvrqYD  340 (461)
T PF05694_consen  299 ILPEMLKPFGAVP----PLITDILISLDDRFLYVSNWLHGDVRQYD  340 (461)
T ss_dssp             ---GGGGGG-EE----------EEE-TTS-EEEEEETTTTEEEEEE
T ss_pred             cccccccccccCC----CceEeEEEccCCCEEEEEcccCCcEEEEe
Confidence                       12    467889999988875 7777889999886

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG2066|consensus

Probab=94.90  E-value=0.26  Score=34.40  Aligned_cols=94  Identities=16%  Similarity=0.096  Sum_probs=56.8

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCC-c-cchheeccccccC
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDN-K-TCVQEITAHRKKF   77 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~-~-~~~~~~~~~~~~~   77 (106)
                      +|+.||+|.|--+-+.+....+..   ......+..+|.  .+...-+++|+..| +-++.-+- + +....+....   
T Consensus        88 sCS~DGkv~I~sl~~~~~~~~~df---~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e---  160 (846)
T KOG2066|consen   88 SCSDDGKVVIGSLFTDDEITQYDF---KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE---  160 (846)
T ss_pred             EecCCCcEEEeeccCCccceeEec---CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc---
Confidence            578899999999888776555554   234566777777  11112268999988 66554221 1 1111233334   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       +.|.++.|.  |.++|=++.+| |+++|
T Consensus       161 -G~I~~i~W~--g~lIAWand~G-v~vyd  185 (846)
T KOG2066|consen  161 -GPIHSIKWR--GNLIAWANDDG-VKVYD  185 (846)
T ss_pred             -cceEEEEec--CcEEEEecCCC-cEEEe
Confidence             789999996  55665555444 45543

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=94.77  E-value=0.76  Score=30.66  Aligned_cols=53  Identities=17%  Similarity=0.134  Sum_probs=40.8

Q ss_pred             EEeeCCCC-cEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         47 DSRPGHDC-SIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        47 ~~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      ++-|..|| .+-++|.+++.. +.+...-    +.|.+++.+++|..++.+.....+.+
T Consensus       374 ~vigt~dgD~l~iyd~~~~e~-kr~e~~l----g~I~av~vs~dGK~~vvaNdr~el~v  427 (668)
T COG4946         374 DVIGTNDGDKLGIYDKDGGEV-KRIEKDL----GNIEAVKVSPDGKKVVVANDRFELWV  427 (668)
T ss_pred             eEEeccCCceEEEEecCCceE-EEeeCCc----cceEEEEEcCCCcEEEEEcCceEEEE
Confidence            67888888 788999988763 3444455    79999999999998888876655544

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=94.75  E-value=0.12  Score=32.56  Aligned_cols=65  Identities=11%  Similarity=0.156  Sum_probs=42.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      -+...|=++|+++++.+.+....+   .+.++......... +++....++.+.+||..+|+.++.+..
T Consensus       266 dpgteVWv~D~~t~krv~Ri~l~~---~~~Si~Vsqd~~P~-L~~~~~~~~~l~v~D~~tGk~~~~~~~  330 (342)
T PF06433_consen  266 DPGTEVWVYDLKTHKRVARIPLEH---PIDSIAVSQDDKPL-LYALSAGDGTLDVYDAATGKLVRSIEQ  330 (342)
T ss_dssp             S-EEEEEEEETTTTEEEEEEEEEE---EESEEEEESSSS-E-EEEEETTTTEEEEEETTT--EEEEE--
T ss_pred             CCceEEEEEECCCCeEEEEEeCCC---ccceEEEccCCCcE-EEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence            345678889999999988888742   23455555544433 224445678999999999998877764

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=94.68  E-value=0.65  Score=33.47  Aligned_cols=91  Identities=14%  Similarity=0.179  Sum_probs=54.9

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---CCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---DCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..+++|+=. |+......  ....-...++|.|.++.   +++.-.   ...|-+|.- +|-.-..+.-........|..
T Consensus       237 R~iRVy~Re-G~L~stSE--~v~gLe~~l~WrPsG~l---IA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~  309 (928)
T PF04762_consen  237 RVIRVYSRE-GELQSTSE--PVDGLEGALSWRPSGNL---IASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIE  309 (928)
T ss_pred             eEEEEECCC-ceEEeccc--cCCCccCCccCCCCCCE---EEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeE
Confidence            567888865 55522222  22333456889999987   666533   244555543 454333333221111268899


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.|++++..|+....|. |.+|
T Consensus       310 l~Wn~ds~iLAv~~~~~-vqLW  330 (928)
T PF04762_consen  310 LAWNSDSEILAVWLEDR-VQLW  330 (928)
T ss_pred             EEECCCCCEEEEEecCC-ceEE
Confidence            99999999998877655 8887

>KOG2079|consensus

Probab=94.66  E-value=0.22  Score=35.94  Aligned_cols=69  Identities=10%  Similarity=0.161  Sum_probs=47.4

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~  101 (106)
                      ...+.+++++..+..   ++.|-.+|.|.+||...++.++.+..+..++ ..+..+.+..++..+.++...|.
T Consensus       130 ~~~Vtsvafn~dg~~---l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~-t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  130 QGPVTSVAFNQDGSL---LLAGLGDGHVTVWDMHRAKILKVITEHGAPV-TGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             CCcceeeEecCCCce---eccccCCCcEEEEEccCCcceeeeeecCCcc-ceEEEEEEeCCCcEEEEccCCCc
Confidence            344556777777777   8899999999999999999888876654222 34444455444556666666664

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=94.53  E-value=0.53  Score=28.98  Aligned_cols=58  Identities=16%  Similarity=0.236  Sum_probs=37.2

Q ss_pred             EeeCCCCcEEEeeCCCc--cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         48 SRPGHDCSIRLWNLDNK--TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        48 ~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.-.|..|-+-..+..  .++...+.+... ...=..++||||+..+|.+...|+|++||
T Consensus        12 lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~-~PQWRkl~WSpD~tlLa~a~S~G~i~vfd   71 (282)
T PF15492_consen   12 LAILQDQCIEIRSAKDDFSSIIGKCQVPKDP-NPQWRKLAWSPDCTLLAYAESTGTIRVFD   71 (282)
T ss_pred             EEEEeccEEEEEeccCCchheeEEEecCCCC-CchheEEEECCCCcEEEEEcCCCeEEEEe
Confidence            44555666666655543  222222222210 14567899999999999999999999986

>KOG1645|consensus

Probab=94.42  E-value=0.33  Score=31.42  Aligned_cols=55  Identities=7%  Similarity=-0.078  Sum_probs=42.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK   64 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~   64 (106)
                      -+.+|.|.|+.+...+..+..  + ..+-+|.|..+....  +..|-..|.|.+||++..
T Consensus       214 l~nkiki~dlet~~~vssy~a--~-~~~wSC~wDlde~h~--IYaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  214 LGNKIKIMDLETSCVVSSYIA--Y-NQIWSCCWDLDERHV--IYAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             cCceEEEEecccceeeeheec--c-CCceeeeeccCCcce--eEEeccCceEEEEEccCC
Confidence            467899999998887555554  2 346778898877554  679999999999999864

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=94.30  E-value=0.94  Score=31.26  Aligned_cols=52  Identities=13%  Similarity=0.294  Sum_probs=36.9

Q ss_pred             eCCCCcEEEeeCCCccchheec-cccccCCCCeEEEEEc--CCCCEEEEecCCCeEEEc
Q psy17135         50 PGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILDVAFH--PSKPFIASAGADGLAKVF  105 (106)
Q Consensus        50 ~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~i~iw  105 (106)
                      -+....+.|||.+.+.....-. ...    +.|.++.|.  |++..+.+.|..+.|.++
T Consensus        47 ~~~~~~LtIWD~~~~~lE~~~~f~~~----~~I~dLDWtst~d~qsiLaVGf~~~v~l~  101 (631)
T PF12234_consen   47 DSSRSELTIWDTRSGVLEYEESFSED----DPIRDLDWTSTPDGQSILAVGFPHHVLLY  101 (631)
T ss_pred             ECCCCEEEEEEcCCcEEEEeeeecCC----CceeeceeeecCCCCEEEEEEcCcEEEEE
Confidence            3444568899999877433222 223    689999884  688888888888888775

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=94.25  E-value=0.85  Score=30.46  Aligned_cols=90  Identities=17%  Similarity=0.172  Sum_probs=52.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ...+.|+++.....  +... .-.+.+....|.|.+....+ ++|-+...+.++|++.. ....++  +    ..-..+.
T Consensus       254 esnLyl~~~~e~~i--~V~~-~~~~pVhdf~W~p~S~~F~v-i~g~~pa~~s~~~lr~N-l~~~~P--e----~~rNT~~  322 (561)
T COG5354         254 ESNLYLLRITERSI--PVEK-DLKDPVHDFTWEPLSSRFAV-ISGYMPASVSVFDLRGN-LRFYFP--E----QKRNTIF  322 (561)
T ss_pred             cceEEEEeeccccc--ceec-cccccceeeeecccCCceeE-Eecccccceeecccccc-eEEecC--C----ccccccc
Confidence            35567777763332  2221 12345677889998887433 56678888999999755 222222  2    2224456


Q ss_pred             EcCCCCEEEEecCCC---eEEEcC
Q psy17135         86 FHPSKPFIASAGADG---LAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~---~i~iwd  106 (106)
                      |+|.+++++.++.|.   .+-+||
T Consensus       323 fsp~~r~il~agF~nl~gni~i~~  346 (561)
T COG5354         323 FSPHERYILFAGFDNLQGNIEIFD  346 (561)
T ss_pred             ccCcccEEEEecCCccccceEEec
Confidence            788888877766553   344443

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=94.14  E-value=0.27  Score=32.66  Aligned_cols=60  Identities=10%  Similarity=0.206  Sum_probs=42.8

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~  101 (106)
                      +....|+|.+.+   |++.... .|.+|.-.....+..+. |     ..|..+.|+|.+.+|.+-++...
T Consensus        35 ~~~~~~SP~G~~---l~~~~~~-~V~~~~g~~~~~l~~~~-~-----~~V~~~~fSP~~kYL~tw~~~pi   94 (561)
T COG5354          35 VAYVSESPLGTY---LFSEHAA-GVECWGGPSKAKLVRFR-H-----PDVKYLDFSPNEKYLVTWSREPI   94 (561)
T ss_pred             hhheeecCcchh---eehhhcc-ceEEccccchhheeeee-c-----CCceecccCcccceeeeeccCCc
Confidence            455778888877   6666554 58899776655343333 3     58899999999999999876554

>KOG3630|consensus

Probab=93.86  E-value=0.16  Score=36.88  Aligned_cols=94  Identities=13%  Similarity=0.062  Sum_probs=59.8

Q ss_pred             CCceEEEEeCccCceee-----ecc---cCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheecccc
Q psy17135          5 PSSVIYIWTLLELQTYA-----RND---CPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHR   74 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~-----~~~---~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~   74 (106)
                      ++..|..||+++.....     .+.   ... ...-...+.|+|.-...  .+....|+.+++..+..- +....+. -.
T Consensus       122 ng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n--~av~l~dlsl~V~~~~~~~~~v~s~p-~t  198 (1405)
T KOG3630|consen  122 NGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLN--SAVDLSDLSLRVKSTKQLAQNVTSFP-VT  198 (1405)
T ss_pred             CCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccch--hhhhccccchhhhhhhhhhhhhcccC-cc
Confidence            36678889997644311     010   000 11123457788877665  567788888888765432 2222222 12


Q ss_pred             ccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         75 KKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                          ..++++.|+|.|..++.|-..|++..|
T Consensus       199 ----~~~Tav~WSprGKQl~iG~nnGt~vQy  225 (1405)
T KOG3630|consen  199 ----NSQTAVLWSPRGKQLFIGRNNGTEVQY  225 (1405)
T ss_pred             ----cceeeEEeccccceeeEecCCCeEEEe
Confidence                578999999999999999999988654

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=93.84  E-value=1.1  Score=30.26  Aligned_cols=63  Identities=2%  Similarity=-0.087  Sum_probs=41.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~   73 (106)
                      +-|.|.-+|+.+++..-+.......  ..... .-.+..   ++.+..+|.++.+|.++|+.+..++..
T Consensus       439 ~~g~l~AiD~~tGk~~W~~~~~~p~--~~~~l-~t~g~l---vf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       439 HMGSLIAWDPITGKIVWEHKEDFPL--WGGVL-ATAGDL---VFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             CceeEEEEeCCCCceeeEecCCCCC--CCcce-EECCcE---EEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            4578999999999985555443211  11111 112222   466888999999999999988776543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG2395|consensus

Probab=93.75  E-value=1.4  Score=29.83  Aligned_cols=47  Identities=13%  Similarity=0.133  Sum_probs=35.5

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                      ++.|+.+|.||+||--......-+++-.    ..|..+..+.+|.+++.-+
T Consensus       444 IvvgS~~GdIRLYdri~~~AKTAlPgLG----~~I~hVdvtadGKwil~Tc  490 (644)
T KOG2395|consen  444 IVVGSLKGDIRLYDRIGRRAKTALPGLG----DAIKHVDVTADGKWILATC  490 (644)
T ss_pred             EEEeecCCcEEeehhhhhhhhhcccccC----CceeeEEeeccCcEEEEec
Confidence            6899999999999983333333455554    7899999999999876655

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=93.41  E-value=0.33  Score=30.68  Aligned_cols=87  Identities=14%  Similarity=0.090  Sum_probs=49.0

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc----------
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK----------   75 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~----------   75 (106)
                      .+.+.+||+.+++.......   ........|+|.+...   +-. .++.+.+++..++...+.-..-..          
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~---~~~~~~~~~sP~g~~~---~~v-~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwv   94 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPP---PPKLQDAKWSPDGKYI---AFV-RDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWV   94 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-E---ETTBSEEEE-SSSTEE---EEE-ETTEEEEESSTTSEEEESES--TTTEEESB--HH
T ss_pred             ceeEEEEecCCCceEECcCC---ccccccceeecCCCee---EEE-ecCceEEEECCCCCeEEeccccceeEEcCcccee
Confidence            46788999999876332222   3346678899998773   333 356788888876643221110000          


Q ss_pred             ---cCCCCeEEEEEcCCCCEEEEecCC
Q psy17135         76 ---KFDESILDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        76 ---~~~~~v~~~~~~~~~~~~~s~~~d   99 (106)
                         .--+.-..+-||||++.|+....|
T Consensus        95 yeEEv~~~~~~~~WSpd~~~la~~~~d  121 (353)
T PF00930_consen   95 YEEEVFDRRSAVWWSPDSKYLAFLRFD  121 (353)
T ss_dssp             HHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred             ccccccccccceEECCCCCEEEEEEEC
Confidence               000223567899999998765533

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.19  E-value=0.34  Score=21.03  Aligned_cols=33  Identities=9%  Similarity=0.161  Sum_probs=23.5

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK   64 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~   64 (106)
                      +.++.|+|......+|+-.-..+.|.++|++++
T Consensus         3 vR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    3 VRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             eEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            467889976662233666666788999999864

It contains a characteristic DLL sequence motif.

>KOG1916|consensus

Probab=92.11  E-value=0.2  Score=35.69  Aligned_cols=72  Identities=19%  Similarity=0.278  Sum_probs=42.9

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc------CCCCeEEE-EEcCCCCEEEEecCCCeEEEc
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK------FDESILDV-AFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~------~~~~v~~~-~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      -.+.|.|.-.....+..+-.++.+++..+..... ..+..|..+      ...++..+ ..||||..++.++.||.++.|
T Consensus       184 ~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~  262 (1283)
T KOG1916|consen  184 QLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFY  262 (1283)
T ss_pred             ceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCcccee
Confidence            3355555433333356677778888877654322 334445411      00122222 379999999999999998877

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=91.99  E-value=1.1  Score=23.80  Aligned_cols=85  Identities=9%  Similarity=0.033  Sum_probs=47.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|..|++|+=..  .+....-   ...+..+..... ..   ++-+-.+|+|-+|+-..    +.+....+   ..+.+
T Consensus        22 s~D~~IRvf~~~e--~~~Ei~e---~~~v~~L~~~~~-~~---F~Y~l~NGTVGvY~~~~----RlWRiKSK---~~~~~   85 (111)
T PF14783_consen   22 SDDFEIRVFKGDE--IVAEITE---TDKVTSLCSLGG-GR---FAYALANGTVGVYDRSQ----RLWRIKSK---NQVTS   85 (111)
T ss_pred             cCCcEEEEEeCCc--EEEEEec---ccceEEEEEcCC-CE---EEEEecCCEEEEEeCcc----eeeeeccC---CCeEE
Confidence            5677888887653  2223332   223344433333 33   68899999999996632    22222221   35666


Q ss_pred             EEEcC---CCC-EEEEecCCCeEEE
Q psy17135         84 VAFHP---SKP-FIASAGADGLAKV  104 (106)
Q Consensus        84 ~~~~~---~~~-~~~s~~~d~~i~i  104 (106)
                      +.+..   +|. -|++|-.+|.+-+
T Consensus        86 ~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   86 MAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             EEEEcCCCCCceEEEEEecCCeEEe
Confidence            65443   333 4888888888743

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=91.70  E-value=2.9  Score=29.71  Aligned_cols=85  Identities=8%  Similarity=0.004  Sum_probs=48.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCC-CCee---------Eee----eCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSE-PPAC---------QTI----PSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI   70 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~---------~~~----~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~   70 (106)
                      +=|.|.-+|+++++.+-+......... ...+         ...    .....+.+++.+..|+.++.+|.++|+.+-+.
T Consensus       639 p~G~l~AiDl~tGk~~W~~~~g~~~~~~p~~~~~~~~~~~g~p~~gG~l~TagglvF~~gt~d~~l~A~D~~tGk~lW~~  718 (764)
T TIGR03074       639 PWGYMAAIDLKTGKVVWQHPNGTVRDTGPMGIRMPLPIPIGVPTLGGPLATAGGLVFIGATQDNYLRAYDLSTGKELWKA  718 (764)
T ss_pred             CcEEEEEEECCCCcEeeeeECCccccccccccccccccccCCcccCCcEEEcCCEEEEEeCCCCEEEEEECCCCceeeEe
Confidence            458899999999998665554211110 0000         000    00111223345789999999999999988776


Q ss_pred             ccccccCCCCeEEEEEc-CCCCE
Q psy17135         71 TAHRKKFDESILDVAFH-PSKPF   92 (106)
Q Consensus        71 ~~~~~~~~~~v~~~~~~-~~~~~   92 (106)
                      .-...   ..-.-+.|. .+|+.
T Consensus       719 ~l~~~---~~a~P~tY~~~~GkQ  738 (764)
T TIGR03074       719 RLPAG---GQATPMTYMGKDGKQ  738 (764)
T ss_pred             eCCCC---cccCCEEEEecCCEE
Confidence            65442   223334555 46654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=91.63  E-value=0.52  Score=19.45  Aligned_cols=27  Identities=15%  Similarity=0.306  Sum_probs=17.4

Q ss_pred             CCeEEEEEcCCCCEE-EEecCC--CeEEEc
Q psy17135         79 ESILDVAFHPSKPFI-ASAGAD--GLAKVF  105 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~-~s~~~d--~~i~iw  105 (106)
                      ..-....|+|||+.| .++..+  |...||
T Consensus         9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            456778899999875 455555  655555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=91.59  E-value=3.3  Score=28.58  Aligned_cols=92  Identities=14%  Similarity=0.213  Sum_probs=47.8

Q ss_pred             ceEEEEeCc-----cCceeeecccCCCC---CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cccchheecccccc
Q psy17135          7 SVIYIWTLL-----ELQTYARNDCPELN---SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCVQEITAHRKK   76 (106)
Q Consensus         7 ~~i~iwd~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~   76 (106)
                      ..|.+|-+.     +.+.+..-.++...   .-.-.|.|+|......+ +| ..|-.| +.++.  +......+. ..  
T Consensus        82 khVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~V-LT-~~dvSV-~~sV~~d~srVkaDi~-~~--  155 (671)
T PF15390_consen   82 KHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTV-LT-ARDVSV-LPSVHCDSSRVKADIK-TS--  155 (671)
T ss_pred             ceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEE-Ee-cCceeE-eeeeeeCCceEEEecc-CC--
Confidence            568889875     23332222222211   12334889998876322 22 223222 23333  223333343 23  


Q ss_pred             CCCCeEEEEEcCCCCEEEE-ecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIAS-AGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s-~~~d~~i~iwd  106 (106)
                        +.|.|..|.+||..++. .+..=-.++||
T Consensus       156 --G~IhCACWT~DG~RLVVAvGSsLHSyiWd  184 (671)
T PF15390_consen  156 --GLIHCACWTKDGQRLVVAVGSSLHSYIWD  184 (671)
T ss_pred             --ceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence              68999999999987544 33333456775

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=91.54  E-value=3.4  Score=28.72  Aligned_cols=88  Identities=14%  Similarity=0.136  Sum_probs=53.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC-----CCc----cchhee--ccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL-----DNK----TCVQEI--TAH   73 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~-----~~~----~~~~~~--~~~   73 (106)
                      ....+.|||.+.+......... ....+..+.|...... ..+++.+..+.|.++.-     .+.    .+++.+  ..+
T Consensus        49 ~~~~LtIWD~~~~~lE~~~~f~-~~~~I~dLDWtst~d~-qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~  126 (631)
T PF12234_consen   49 SRSELTIWDTRSGVLEYEESFS-EDDPIRDLDWTSTPDG-QSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSH  126 (631)
T ss_pred             CCCEEEEEEcCCcEEEEeeeec-CCCceeeceeeecCCC-CEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecC
Confidence            3567999999988875544442 2344666777654332 22577777788888742     111    123332  222


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEec
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                      ..   ..|.+..|.++|..++.++
T Consensus       127 T~---h~Igds~Wl~~G~LvV~sG  147 (631)
T PF12234_consen  127 TP---HPIGDSIWLKDGTLVVGSG  147 (631)
T ss_pred             CC---CCccceeEecCCeEEEEeC
Confidence            21   4677889999988766554

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2114|consensus

Probab=91.44  E-value=1.9  Score=30.75  Aligned_cols=71  Identities=15%  Similarity=0.211  Sum_probs=42.5

Q ss_pred             CeeEeeeCCCCceEEEeeCCCC-----cEEEeeCCCc------cch---heeccccccCCCCeEEEEEcCCCCEEEEecC
Q psy17135         33 PACQTIPSSNISLFDSRPGHDC-----SIRLWNLDNK------TCV---QEITAHRKKFDESILDVAFHPSKPFIASAGA   98 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~-----~v~iwd~~~~------~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~   98 (106)
                      ....|.......  |++.++|.     .+++|+++..      .++   +.+....+.....+.+++.+.+-..+|.|-.
T Consensus        68 v~~L~~~~~~~~--L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~  145 (933)
T KOG2114|consen   68 VQFLYILNKQNF--LFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFT  145 (933)
T ss_pred             hhHhhcccCceE--EEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEec
Confidence            334444444332  66766554     4899998743      223   1111010011257788899988888999999


Q ss_pred             CCeEEEc
Q psy17135         99 DGLAKVF  105 (106)
Q Consensus        99 d~~i~iw  105 (106)
                      +|.|..+
T Consensus       146 nG~V~~~  152 (933)
T KOG2114|consen  146 NGLVICY  152 (933)
T ss_pred             CcEEEEE
Confidence            9988754

>KOG1008|consensus

Probab=91.44  E-value=0.19  Score=34.42  Aligned_cols=68  Identities=19%  Similarity=0.301  Sum_probs=40.4

Q ss_pred             EeeeCCCCceEEEeeCCCCcEEEee-CCC-ccchheeccccccCCCCeEEEEEcCCCC-EEEEecCC-CeEEEcC
Q psy17135         36 QTIPSSNISLFDSRPGHDCSIRLWN-LDN-KTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGAD-GLAKVFV  106 (106)
Q Consensus        36 ~~~~~~~~~~~~~s~~~d~~v~iwd-~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d-~~i~iwd  106 (106)
                      ...|....   .++...|+.+-+|| .++ ..++.++...+..--.++..++|+|... .+++..+| ++|+++|
T Consensus       202 tVdp~~~n---Y~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlyd  273 (783)
T KOG1008|consen  202 TVDPFSPN---YFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYD  273 (783)
T ss_pred             eecCCCCC---ceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEec
Confidence            34564444   35556699999999 444 3344444433211014689999999554 36666666 5677654

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=91.19  E-value=0.24  Score=33.16  Aligned_cols=23  Identities=22%  Similarity=0.596  Sum_probs=20.2

Q ss_pred             EEeeCCCCcEEEeeCCCccchhe
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQE   69 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~   69 (106)
                      +++.+.|+.+|+||+.+++++..
T Consensus       233 l~tl~~D~~LRiW~l~t~~~~~~  255 (547)
T PF11715_consen  233 LFTLSRDHTLRIWSLETGQCLAT  255 (547)
T ss_dssp             EEEEETTSEEEEEETTTTCEEEE
T ss_pred             EEEEeCCCeEEEEECCCCeEEEE
Confidence            68999999999999999988444

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>KOG1920|consensus

Probab=91.10  E-value=3.9  Score=30.48  Aligned_cols=67  Identities=12%  Similarity=0.057  Sum_probs=46.7

Q ss_pred             CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      ..+.++.|......   ++.+...|.|.+-|..+.. +.....-.    .+|.+.+||||+.+++-....+++.+
T Consensus        69 ~~i~s~~fl~d~~~---i~v~~~~G~iilvd~et~~-~eivg~vd----~GI~aaswS~Dee~l~liT~~~tll~  135 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNS---ICVITALGDIILVDPETLE-LEIVGNVD----NGISAASWSPDEELLALITGRQTLLF  135 (1265)
T ss_pred             cceEEEEEecccce---EEEEecCCcEEEEcccccc-eeeeeecc----CceEEEeecCCCcEEEEEeCCcEEEE
Confidence            34566777777766   5677778888888776543 22222233    78999999999999888777776644

>KOG0882|consensus

Probab=90.98  E-value=3.3  Score=27.58  Aligned_cols=97  Identities=11%  Similarity=0.089  Sum_probs=61.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hhe-eccccccCCCCe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQE-ITAHRKKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~-~~~~~~~~~~~v   81 (106)
                      .+|..++++|+.+............. +...+...+......+.++...++.+.++|-....+ ... -.-|.    .+|
T Consensus        73 d~Dhs~KvfDvEn~DminmiKL~~lP-g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~----sPV  147 (558)
T KOG0882|consen   73 DPDHSVKVFDVENFDMINMIKLVDLP-GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHF----SPV  147 (558)
T ss_pred             CcccceeEEEeeccchhhhcccccCC-CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceeccccc----Cce
Confidence            35889999999887765444442211 222333333333332335556778899999775442 222 23355    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..+.+++.+..++|....|-|.-|
T Consensus       148 ~~i~y~qa~Ds~vSiD~~gmVEyW  171 (558)
T KOG0882|consen  148 KKIRYNQAGDSAVSIDISGMVEYW  171 (558)
T ss_pred             EEEEeeccccceeeccccceeEee
Confidence            999999988888888877877777

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=90.42  E-value=1.2  Score=29.40  Aligned_cols=48  Identities=10%  Similarity=0.160  Sum_probs=30.6

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~  101 (106)
                      |+..+. +.|.+||+.+++.++.+..      ..|..+.|++++.+++-.+.+..
T Consensus       120 L~~~~~-~~i~~yDw~~~~~i~~i~v------~~vk~V~Ws~~g~~val~t~~~i  167 (443)
T PF04053_consen  120 LGVKSS-DFICFYDWETGKLIRRIDV------SAVKYVIWSDDGELVALVTKDSI  167 (443)
T ss_dssp             EEEEET-TEEEEE-TTT--EEEEESS-------E-EEEEE-TTSSEEEEE-S-SE
T ss_pred             EEEECC-CCEEEEEhhHcceeeEEec------CCCcEEEEECCCCEEEEEeCCeE
Confidence            444443 3799999999998888862      24789999999999888876643

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=90.13  E-value=3.6  Score=26.56  Aligned_cols=91  Identities=10%  Similarity=0.092  Sum_probs=59.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC--CCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG--HDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      +++.|.+.|+.+..........   .....+.+.+.+...  .++-.  .++++.+.|..+.+.+.....-.    .. .
T Consensus        94 ~~~~v~vid~~~~~~~~~~~vG---~~P~~~~~~~~~~~v--YV~n~~~~~~~vsvid~~t~~~~~~~~vG~----~P-~  163 (381)
T COG3391          94 DSNTVSVIDTATNTVLGSIPVG---LGPVGLAVDPDGKYV--YVANAGNGNNTVSVIDAATNKVTATIPVGN----TP-T  163 (381)
T ss_pred             CCCeEEEEcCcccceeeEeeec---cCCceEEECCCCCEE--EEEecccCCceEEEEeCCCCeEEEEEecCC----Cc-c
Confidence            3677888887777665555442   145667778877763  23333  47888899998888777754333    23 8


Q ss_pred             EEEEcCCCCEE-EEecCCCeEEEc
Q psy17135         83 DVAFHPSKPFI-ASAGADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~~~~~-~s~~~d~~i~iw  105 (106)
                      .+++.|++..+ ++-..++.+.+.
T Consensus       164 ~~a~~p~g~~vyv~~~~~~~v~vi  187 (381)
T COG3391         164 GVAVDPDGNKVYVTNSDDNTVSVI  187 (381)
T ss_pred             eEEECCCCCeEEEEecCCCeEEEE
Confidence            88999999854 444466666654

>KOG4649|consensus

Probab=90.11  E-value=3.1  Score=25.84  Aligned_cols=61  Identities=11%  Similarity=-0.016  Sum_probs=40.1

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT   71 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~   71 (106)
                      .|.+++.+.++|.....+...  ..........+.+..   +..++.|+.....|.++..++...+
T Consensus        72 ~g~lYfl~~~tGs~~w~f~~~--~~vk~~a~~d~~~gl---Iycgshd~~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen   72 SGGLYFLCVKTGSQIWNFVIL--ETVKVRAQCDFDGGL---IYCGSHDGNFYALDPKTYGCVYKSK  132 (354)
T ss_pred             cCcEEEEEecchhheeeeeeh--hhhccceEEcCCCce---EEEecCCCcEEEecccccceEEecc
Confidence            566788888888765555442  111122333445555   7899999999999998877765543

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=89.73  E-value=3.6  Score=25.94  Aligned_cols=93  Identities=9%  Similarity=0.051  Sum_probs=55.0

Q ss_pred             CCCceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEee----------------CCCCcEEEeeCCCccc
Q psy17135          4 VPSSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP----------------GHDCSIRLWNLDNKTC   66 (106)
Q Consensus         4 ~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----------------~~d~~v~iwd~~~~~~   66 (106)
                      ...|.|-+||.. +.+.+..+..  +--+...+.+.|++...++ +-|                .++..+-..|..+|+.
T Consensus        74 ~g~G~IgVyd~~~~~~ri~E~~s--~GIGPHel~l~pDG~tLvV-ANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l  150 (305)
T PF07433_consen   74 TGRGVIGVYDAARGYRRIGEFPS--HGIGPHELLLMPDGETLVV-ANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL  150 (305)
T ss_pred             CCcEEEEEEECcCCcEEEeEecC--CCcChhhEEEcCCCCEEEE-EcCCCccCcccCceecChhhcCCceEEEecCCCce
Confidence            457899999998 5665444444  3334566778887765211 222                2334455556677776


Q ss_pred             hheeccccccCCCCeEEEEEcCCCCEEEEecCC
Q psy17135         67 VQEITAHRKKFDESILDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d   99 (106)
                      +.+..-...-+...+..+++.+++..++..-..
T Consensus       151 l~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~q  183 (305)
T PF07433_consen  151 LEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQ  183 (305)
T ss_pred             eeeeecCccccccceeeEEecCCCcEEEEEecC
Confidence            666432111112678888888888776655433

>KOG4499|consensus

Probab=89.36  E-value=3.5  Score=25.27  Aligned_cols=37  Identities=11%  Similarity=0.038  Sum_probs=32.1

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH   87 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~   87 (106)
                      .+++-..++|...|..+|+.+.++.-+.    ..+++.+|-
T Consensus       226 ~Va~~ng~~V~~~dp~tGK~L~eiklPt----~qitsccFg  262 (310)
T KOG4499|consen  226 YVATFNGGTVQKVDPTTGKILLEIKLPT----PQITSCCFG  262 (310)
T ss_pred             EEEEecCcEEEEECCCCCcEEEEEEcCC----CceEEEEec
Confidence            5777778899999999999999988777    899999985

>KOG4649|consensus

Probab=89.07  E-value=3.9  Score=25.46  Aligned_cols=54  Identities=6%  Similarity=-0.063  Sum_probs=36.7

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE-EEcCCCCEEEEecCCCeEEEc
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV-AFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ++-|...+.+.+.+.++|..+..+..-.     .|-+- ...+++..+..++.|+..+.-
T Consensus        66 VV~GCy~g~lYfl~~~tGs~~w~f~~~~-----~vk~~a~~d~~~glIycgshd~~~yal  120 (354)
T KOG4649|consen   66 VVLGCYSGGLYFLCVKTGSQIWNFVILE-----TVKVRAQCDFDGGLIYCGSHDGNFYAL  120 (354)
T ss_pred             EEEEEccCcEEEEEecchhheeeeeehh-----hhccceEEcCCCceEEEecCCCcEEEe
Confidence            6889999999999999997666655433     22222 234567777777777776543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=88.78  E-value=5  Score=26.50  Aligned_cols=69  Identities=14%  Similarity=0.039  Sum_probs=42.1

Q ss_pred             CCeeEeeeCCCCceEEEeeCCC-CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE-EEEecCCCeEEEc
Q psy17135         32 PPACQTIPSSNISLFDSRPGHD-CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF-IASAGADGLAKVF  105 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~s~~~d~~i~iw  105 (106)
                      ...-.|.|.+....++.--... ..+.++++++++....... .    ..-..-+|+||++. +++..+|+...+|
T Consensus       195 ~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~-~----g~~~~P~fspDG~~l~f~~~rdg~~~iy  265 (425)
T COG0823         195 ILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNF-N----GNNGAPAFSPDGSKLAFSSSRDGSPDIY  265 (425)
T ss_pred             eeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeecc-C----CccCCccCCCCCCEEEEEECCCCCccEE
Confidence            3445678877775442111222 4588899998875555442 2    33455689999887 4666677765554

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=88.26  E-value=3.4  Score=27.03  Aligned_cols=48  Identities=10%  Similarity=-0.019  Sum_probs=35.3

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD   62 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~   62 (106)
                      .|.||+.. |+.+.......  ..+..+.|... ..   |+....||.++++|+.
T Consensus        62 ~I~iys~s-G~ll~~i~w~~--~~iv~~~wt~~-e~---LvvV~~dG~v~vy~~~  109 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDS--GRIVGMGWTDD-EE---LVVVQSDGTVRVYDLF  109 (410)
T ss_pred             EEEEECCC-CCEeEEEEECC--CCEEEEEECCC-Ce---EEEEEcCCEEEEEeCC
Confidence            69999986 55666666643  45777888774 44   5677789999999986

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=88.14  E-value=3.9  Score=24.35  Aligned_cols=86  Identities=13%  Similarity=-0.010  Sum_probs=43.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~   83 (106)
                      ..+.|.-||..+++... ...    .....+.+......   ++.+... .+.++|..+++........... .....+.
T Consensus        20 ~~~~i~~~~~~~~~~~~-~~~----~~~~G~~~~~~~g~---l~v~~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND   90 (246)
T PF08450_consen   20 PGGRIYRVDPDTGEVEV-IDL----PGPNGMAFDRPDGR---LYVADSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPND   90 (246)
T ss_dssp             TTTEEEEEETTTTEEEE-EES----SSEEEEEEECTTSE---EEEEETT-CEEEEETTTTEEEEEEEEETTCSCTEEEEE
T ss_pred             CCCEEEEEECCCCeEEE-Eec----CCCceEEEEccCCE---EEEEEcC-ceEEEecCCCcEEEEeeccCCCcccCCCce
Confidence            45566666666655421 222    12444555533433   3444444 4555698887543322221000 0157788


Q ss_pred             EEEcCCCCEEEEecCC
Q psy17135         84 VAFHPSKPFIASAGAD   99 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d   99 (106)
                      +++.|+|.+.++....
T Consensus        91 ~~vd~~G~ly~t~~~~  106 (246)
T PF08450_consen   91 VAVDPDGNLYVTDSGG  106 (246)
T ss_dssp             EEE-TTS-EEEEEECC
T ss_pred             EEEcCCCCEEEEecCC
Confidence            9999999988776533

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=87.51  E-value=5.1  Score=25.01  Aligned_cols=92  Identities=13%  Similarity=0.041  Sum_probs=52.3

Q ss_pred             CceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .+.|.+|++...+ ........   ...........+..   ++.|.....+.++..+. ...+..+.....  ...+.+
T Consensus       106 g~~l~v~~l~~~~~l~~~~~~~---~~~~i~sl~~~~~~---I~vgD~~~sv~~~~~~~~~~~l~~va~d~~--~~~v~~  177 (321)
T PF03178_consen  106 GNKLYVYDLDNSKTLLKKAFYD---SPFYITSLSVFKNY---ILVGDAMKSVSLLRYDEENNKLILVARDYQ--PRWVTA  177 (321)
T ss_dssp             TTEEEEEEEETTSSEEEEEEE----BSSSEEEEEEETTE---EEEEESSSSEEEEEEETTTE-EEEEEEESS---BEEEE
T ss_pred             cCEEEEEEccCcccchhhheec---ceEEEEEEeccccE---EEEEEcccCEEEEEEEccCCEEEEEEecCC--CccEEE
Confidence            4678999998877 43333332   11233333333444   67777777787775443 222333322110  145778


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.+-+++..++.+..+|.+.++
T Consensus       178 ~~~l~d~~~~i~~D~~gnl~~l  199 (321)
T PF03178_consen  178 AEFLVDEDTIIVGDKDGNLFVL  199 (321)
T ss_dssp             EEEE-SSSEEEEEETTSEEEEE
T ss_pred             EEEecCCcEEEEEcCCCeEEEE
Confidence            8887666788999999988765

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=87.15  E-value=5.6  Score=25.11  Aligned_cols=86  Identities=12%  Similarity=0.038  Sum_probs=53.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC-----CCcEEEeeCCCc-cchheeccccccCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH-----DCSIRLWNLDNK-TCVQEITAHRKKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----d~~v~iwd~~~~-~~~~~~~~~~~~~~   78 (106)
                      +-....++|....+.......+...--..--.|+|++..   |...-.     -|.|-+||.+.+ +.+..+..|.    
T Consensus        89 PGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~---LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~G----  161 (366)
T COG3490          89 PGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRL---LYATENDFDPNRGVIGVYDAREGFQRVGEFSTHG----  161 (366)
T ss_pred             CCceEEEECCCCCcCcEEEecccCceeecccccCCCCcE---EEeecCCCCCCCceEEEEecccccceecccccCC----
Confidence            334566788877665444443321111122447787776   333322     266889999865 4567777777    


Q ss_pred             CCeEEEEEcCCCCEEEEec
Q psy17135         79 ESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~   97 (106)
                      -.-..+.+.+||+.++.+.
T Consensus       162 iGpHev~lm~DGrtlvvan  180 (366)
T COG3490         162 IGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             cCcceeEEecCCcEEEEeC
Confidence            6778889999999887664

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=87.09  E-value=4.6  Score=24.05  Aligned_cols=93  Identities=12%  Similarity=0.001  Sum_probs=52.4

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-h---heeccccccCCCCeE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-V---QEITAHRKKFDESIL   82 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~---~~~~~~~~~~~~~v~   82 (106)
                      |.|..++.. ++.......   -.....+.|+|.+...  +++-+..+.|..+++..... +   +.+..... .....-
T Consensus       115 g~v~~~~~~-~~~~~~~~~---~~~pNGi~~s~dg~~l--yv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~g~pD  187 (246)
T PF08450_consen  115 GSVYRIDPD-GKVTVVADG---LGFPNGIAFSPDGKTL--YVADSFNGRIWRFDLDADGGELSNRRVFIDFPG-GPGYPD  187 (246)
T ss_dssp             EEEEEEETT-SEEEEEEEE---ESSEEEEEEETTSSEE--EEEETTTTEEEEEEEETTTCCEEEEEEEEE-SS-SSCEEE
T ss_pred             cceEEECCC-CeEEEEecC---cccccceEECCcchhe--eecccccceeEEEeccccccceeeeeeEEEcCC-CCcCCC
Confidence            556666666 333111111   2235568899987763  45778888888888863221 1   12211110 002356


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++..++++.++....+.|.+++
T Consensus       188 G~~vD~~G~l~va~~~~~~I~~~~  211 (246)
T PF08450_consen  188 GLAVDSDGNLWVADWGGGRIVVFD  211 (246)
T ss_dssp             EEEEBTTS-EEEEEETTTEEEEEE
T ss_pred             cceEcCCCCEEEEEcCCCEEEEEC
Confidence            788888888888777777776653

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=87.03  E-value=6.2  Score=25.44  Aligned_cols=64  Identities=5%  Similarity=-0.144  Sum_probs=37.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCC-----CeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEP-----PACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT   71 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~   71 (106)
                      .++.+.-+|.++|+.+-+..........     ..+.-.|  .+..   +..++.++.+..+|.++|+.+....
T Consensus        77 ~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---v~v~~~~g~l~ald~~tG~~~W~~~  147 (394)
T PRK11138         77 RAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGK---VYIGSEKGQVYALNAEDGEVAWQTK  147 (394)
T ss_pred             CCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCE---EEEEcCCCEEEEEECCCCCCccccc
Confidence            4577888999988886665543211000     0000001  1222   4567788999999999998766554

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=86.24  E-value=6.8  Score=25.16  Aligned_cols=66  Identities=17%  Similarity=0.206  Sum_probs=33.6

Q ss_pred             CceEEEEeCccCceeeecccCCC-C----CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135          6 SSVIYIWTLLELQTYARNDCPEL-N----SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      .-.|.+||.++.........+.. .    ........+..+... ++.-.+-...|.+.|+..++.+.++..
T Consensus        66 tDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~-~V~N~TPa~SVtVVDl~~~kvv~ei~~  136 (342)
T PF06433_consen   66 TDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFL-YVQNFTPATSVTVVDLAAKKVVGEIDT  136 (342)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEE-EEEEESSSEEEEEEETTTTEEEEEEEG
T ss_pred             eeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEE-EEEccCCCCeEEEEECCCCceeeeecC
Confidence            34688999999877554444321 1    011122333333332 122334445566777777666665543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=85.88  E-value=6  Score=24.16  Aligned_cols=69  Identities=12%  Similarity=0.098  Sum_probs=45.9

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      .+..+.|.|.....  ++.....+.|.-.+. +|+.++.+.-...   .....+++..++.++++.-+++.+.++
T Consensus        23 e~SGLTy~pd~~tL--faV~d~~~~i~els~-~G~vlr~i~l~g~---~D~EgI~y~g~~~~vl~~Er~~~L~~~   91 (248)
T PF06977_consen   23 ELSGLTYNPDTGTL--FAVQDEPGEIYELSL-DGKVLRRIPLDGF---GDYEGITYLGNGRYVLSEERDQRLYIF   91 (248)
T ss_dssp             -EEEEEEETTTTEE--EEEETTTTEEEEEET-T--EEEEEE-SS----SSEEEEEE-STTEEEEEETTTTEEEEE
T ss_pred             CccccEEcCCCCeE--EEEECCCCEEEEEcC-CCCEEEEEeCCCC---CCceeEEEECCCEEEEEEcCCCcEEEE
Confidence            45668999977763  677788888887786 4777777654431   577888888778777777667776543

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=85.56  E-value=6.4  Score=24.22  Aligned_cols=55  Identities=11%  Similarity=-0.031  Sum_probs=35.7

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE-cCC-C-CEEEEecCCCeEEEc
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF-HPS-K-PFIASAGADGLAKVF  105 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~-~-~~~~s~~~d~~i~iw  105 (106)
                      ++-|.+++.+.+.|...-..+.++.-..    ..+.-... .-+ . ..++.+++||.|++-
T Consensus       198 LViGTE~~~i~iLd~~af~il~~~~lps----vPv~i~~~G~~devdyRI~Va~Rdg~iy~i  255 (257)
T PF14779_consen  198 LVIGTESGEIYILDPQAFTILKQVQLPS----VPVFISVSGQYDEVDYRIVVACRDGKIYTI  255 (257)
T ss_pred             EEEEecCCeEEEECchhheeEEEEecCC----CceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence            6889999999999998766666655443    23321111 112 2 347888899998763

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=85.44  E-value=8.8  Score=25.72  Aligned_cols=65  Identities=5%  Similarity=-0.114  Sum_probs=41.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCC------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELN------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      .+|.+.-.|+.+++.+-........      ...........+..   ++.++.|+.+..+|.++|+.+...+.
T Consensus       364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~---v~~g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNL---VFAGAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCe---EEEECCCCeEEEEECCCCceeeEEEC
Confidence            4688999999999986655442111      00000001112233   57788999999999999998776654

The alignment model contains an 8-bladed beta-propeller.

>KOG3621|consensus

Probab=85.07  E-value=3  Score=29.15  Aligned_cols=55  Identities=15%  Similarity=0.074  Sum_probs=39.9

Q ss_pred             EEeeCCCCcEEEeeCCCccchhe-eccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ++-|+.-|.+.+|+-..++.... ..+..    ..+.....|++..++|.|+..|.|.++
T Consensus        48 l~~GsS~G~lyl~~R~~~~~~~~~~~~~~----~~~~~~~vs~~e~lvAagt~~g~V~v~  103 (726)
T KOG3621|consen   48 LAMGSSAGSVYLYNRHTGEMRKLKNEGAT----GITCVRSVSSVEYLVAAGTASGRVSVF  103 (726)
T ss_pred             EEEecccceEEEEecCchhhhcccccCcc----ceEEEEEecchhHhhhhhcCCceEEee
Confidence            78899999999998776653222 22232    456666789888888999888888765

>PF01011 PQQ: PQQ enzyme repeat family

Probab=84.90  E-value=2  Score=17.73  Aligned_cols=25  Identities=4%  Similarity=-0.063  Sum_probs=20.2

Q ss_pred             EeeCCCCcEEEeeCCCccchheecc
Q psy17135         48 SRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus        48 ~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      ..+..++.+...|.++|+.+-.+..
T Consensus         4 ~~~~~~g~l~AlD~~TG~~~W~~~~   28 (38)
T PF01011_consen    4 YVGTPDGYLYALDAKTGKVLWKFQT   28 (38)
T ss_dssp             EEETTTSEEEEEETTTTSEEEEEES
T ss_pred             EEeCCCCEEEEEECCCCCEEEeeeC
Confidence            4558999999999999998766653

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>smart00564 PQQ beta-propeller repeat

Probab=84.48  E-value=1.8  Score=16.87  Aligned_cols=22  Identities=5%  Similarity=-0.091  Sum_probs=17.0

Q ss_pred             EEeeCCCCcEEEeeCCCccchh
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQ   68 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~   68 (106)
                      +..++.++.+..+|.++|+.+.
T Consensus         9 v~~~~~~g~l~a~d~~~G~~~W   30 (33)
T smart00564        9 VYVGSTDGTLYALDAKTGEILW   30 (33)
T ss_pred             EEEEcCCCEEEEEEcccCcEEE
Confidence            4667788999999998887543

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=83.52  E-value=4.9  Score=23.95  Aligned_cols=20  Identities=20%  Similarity=0.499  Sum_probs=16.0

Q ss_pred             CCCceEEEEeCccCceeeec
Q psy17135          4 VPSSVIYIWTLLELQTYARN   23 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~   23 (106)
                      ..+|.+++||+.+++.+...
T Consensus        29 T~~G~l~vWnl~~~k~~~~~   48 (219)
T PF07569_consen   29 TSSGLLYVWNLKKGKAVLPP   48 (219)
T ss_pred             eCCCeEEEEECCCCeeccCC
Confidence            57899999999998874433

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=83.51  E-value=2.3  Score=17.49  Aligned_cols=26  Identities=4%  Similarity=0.082  Sum_probs=19.1

Q ss_pred             EEeeCCCCcEEEeeCCCccchheecc
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      +++.-.++.|.++|..+++.+..+..
T Consensus         7 yv~~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         7 YVTNSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             EEEeCCCCEEEEEECCCCeEEEEEEC
Confidence            45666678899999988776666654

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>KOG3617|consensus

Probab=82.92  E-value=5.2  Score=29.15  Aligned_cols=53  Identities=11%  Similarity=0.045  Sum_probs=39.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD   62 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~   62 (106)
                      .-|.+.+|...+.+.  ......|...+..+.|++.+..   ++|+..-|.|.+|.+.
T Consensus        79 e~g~~~v~~~~~~e~--htv~~th~a~i~~l~wS~~G~~---l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   79 EMGVSDVQKTNTTET--HTVVETHPAPIQGLDWSHDGTV---LMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             ccceeEEEecCCcee--eeeccCCCCCceeEEecCCCCe---EEEcCCCceeEEEEee
Confidence            346778888877665  2222234556777999999988   8999999999999776

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=81.89  E-value=11  Score=24.33  Aligned_cols=81  Identities=5%  Similarity=-0.085  Sum_probs=44.9

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee-CC---------CCcEEEeeCCCccch--heecccc
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP-GH---------DCSIRLWNLDNKTCV--QEITAHR   74 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~---------d~~v~iwd~~~~~~~--~~~~~~~   74 (106)
                      .+|++.|+.+++.+.....   ......+.|.+.+...  +.+. ..         ...|..|.+.+...-  -.+....
T Consensus       150 ~~l~v~Dl~tg~~l~d~i~---~~~~~~~~W~~d~~~~--~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~  224 (414)
T PF02897_consen  150 YTLRVFDLETGKFLPDGIE---NPKFSSVSWSDDGKGF--FYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPD  224 (414)
T ss_dssp             EEEEEEETTTTEEEEEEEE---EEESEEEEECTTSSEE--EEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TT
T ss_pred             EEEEEEECCCCcCcCCccc---ccccceEEEeCCCCEE--EEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecC
Confidence            5689999999977543211   1222238888877764  2332 22         334677777665432  2233322


Q ss_pred             ccCCCC-eEEEEEcCCCCEEEE
Q psy17135         75 KKFDES-ILDVAFHPSKPFIAS   95 (106)
Q Consensus        75 ~~~~~~-v~~~~~~~~~~~~~s   95 (106)
                      .   .. ...+..++++++++.
T Consensus       225 ~---~~~~~~~~~s~d~~~l~i  243 (414)
T PF02897_consen  225 E---PFWFVSVSRSKDGRYLFI  243 (414)
T ss_dssp             C---TTSEEEEEE-TTSSEEEE
T ss_pred             C---CcEEEEEEecCcccEEEE
Confidence            1   23 567788999998654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=81.72  E-value=5.2  Score=20.30  Aligned_cols=47  Identities=11%  Similarity=0.073  Sum_probs=28.0

Q ss_pred             EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEE-EEecCC
Q psy17135         48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFI-ASAGAD   99 (106)
Q Consensus        48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d   99 (106)
                      ..+..+|.+.-||..+++...-+. .-    ...+.+++++++..+ ++-...
T Consensus        31 le~~~~GRll~ydp~t~~~~vl~~-~L----~fpNGVals~d~~~vlv~Et~~   78 (89)
T PF03088_consen   31 LEGRPTGRLLRYDPSTKETTVLLD-GL----YFPNGVALSPDESFVLVAETGR   78 (89)
T ss_dssp             HHT---EEEEEEETTTTEEEEEEE-EE----SSEEEEEE-TTSSEEEEEEGGG
T ss_pred             ecCCCCcCEEEEECCCCeEEEehh-CC----CccCeEEEcCCCCEEEEEeccC
Confidence            456777888889998876332232 23    466889999999864 444433

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=81.59  E-value=2.4  Score=16.23  Aligned_cols=25  Identities=16%  Similarity=0.182  Sum_probs=17.7

Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ...++..+++..+++-+....|.++
T Consensus         4 P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    4 PHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CcEEEEeCCCCEEEEECCCCEEEEC
Confidence            3566777788877777777777654

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	106
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-04
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		7e-04
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		8e-04

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 41  SNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADG 100
           SN   F      D S+RLWNL N  C  +   H K     +L VAF P    I S G D 
Sbjct: 76  SNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKD----VLSVAFSPDNRQIVSGGRDN 131
Query: 101 LAKVF 105
             +V+
Sbjct: 132 ALRVW 136

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 53  DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           D +I++W+   K+CV  +  H      ++    FHP+ P I S   DG  K++
Sbjct: 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAV----FHPTLPIIISGSEDGTLKIW 255

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 53  DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           D +I++W+   K+CV  +  H      ++    FHP+ P I S   DG  K++
Sbjct: 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAV----FHPTLPIIISGSEDGTLKIW 255

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	106
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.85
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.84
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.84
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.84
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.84
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.83
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.83
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.83
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.83
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.83
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.82
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.81
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.81
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.81
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.81
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.81
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.81
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.8
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.8
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.8
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.8
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.8
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.79
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.79
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.78
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.78
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.78
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.78
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.78
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.77
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.77
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.77
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.77
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.77
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.76
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.76
2pm7_B	297	Protein transport protein SEC13, protein transport	99.75
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.75
2pm7_B	297	Protein transport protein SEC13, protein transport	99.75
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.75
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.74
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.74
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.74
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.74
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.74
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.73
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.73
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.73
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.73
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.73
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.72
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.72
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.72
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.71
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.71
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.71
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.71
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.71
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.7
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.7
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.7
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.7
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.69
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.69
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.69
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.69
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.69
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.69
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.69
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.68
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.68
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.68
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.68
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.68
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.68
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.67
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.67
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.66
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.66
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.66
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.66
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.66
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.66
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.65
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.65
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.65
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.65
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.65
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.65
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.65
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.64
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.64
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.64
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.64
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.64
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.64
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.64
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.64
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.64
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.63
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.63
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.63
3jro_A	753	Fusion protein of protein transport protein SEC13	99.63
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.62
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.62
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.62
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.62
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.62
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.61
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.61
3jro_A	753	Fusion protein of protein transport protein SEC13	99.6
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.6
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.59
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.59
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.58
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.58
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.58
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.58
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.57
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.57
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.55
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.55
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.53
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.49
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.45
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.44
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.37
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.28
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.24
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.22
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.15
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.15
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.14
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.08
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.07
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.07
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.05
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.05
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.04
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.03
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.02
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.01
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.01
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.99
1k32_A	1045	Tricorn protease; protein degradation, substrate g	98.99
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	98.98
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	98.97
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	98.95
1k32_A	1045	Tricorn protease; protein degradation, substrate g	98.94
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	98.93
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.93
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	98.92
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	98.92
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	98.86
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	98.85
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	98.84
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	98.83
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.82
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	98.75
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	98.75
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	98.74
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	98.7
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	98.7
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.66
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	98.61
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.57
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.56
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.56
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	98.56
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.5
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	98.49
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	98.46
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.45
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.41
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	98.39
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.35
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	98.34
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.25
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.23
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.18
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.13
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.12
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.11
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.07
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.06
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.05
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.02
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.02
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.0
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.0
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.0
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	97.96
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	97.96
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	97.94
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	97.93
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	97.89
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	97.89
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	97.84
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.82
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	97.81
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.8
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	97.74
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	97.72
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.69
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	97.65
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.51
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.4
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.38
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.38
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	97.37
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	97.35
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.33
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.32
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	97.31
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.26
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	97.24
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	97.23
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	97.18
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.17
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.07
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	97.07
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.05
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	97.03
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	96.97
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	96.93
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	96.92
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	96.79
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	96.77
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	96.76
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	96.74
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.71
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	96.7
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	96.61
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	96.61
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	96.59
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.57
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	96.52
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	96.47
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.46
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	96.41
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	96.3
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	96.28
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.22
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	96.11
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	96.05
2qe8_A	343	Uncharacterized protein; structural genomics, join	95.99
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	95.66
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	95.6
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	95.57
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	95.32
2ece_A	462	462AA long hypothetical selenium-binding protein;	95.14
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	95.12
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	94.66
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	94.55
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	94.38
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.97
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.74
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	93.71
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	92.9
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	92.55
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	91.74
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	91.67
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	91.35
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	91.01
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	90.9
3v65_B	386	Low-density lipoprotein receptor-related protein;	90.86
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	90.83
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	90.11
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	89.76
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	88.36
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	88.22
2p4o_A	306	Hypothetical protein; putative lactonase, structur	87.99
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	87.07
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	86.99
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	86.8
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	86.14
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	86.01
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	85.62
2p4o_A	306	Hypothetical protein; putative lactonase, structur	85.0
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	83.34
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	82.09
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	81.74
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	81.19
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	80.99
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	80.59

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.85  E-value=4.6e-21  Score=116.58  Aligned_cols=98  Identities=17%  Similarity=0.272  Sum_probs=79.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+++++....+....+...+.++.|+|.+...  +++|+.|+.|++||+++++++..+.+|.    ..|.
T Consensus       188 ~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--l~sg~~dg~v~~wd~~~~~~~~~~~~h~----~~v~  261 (344)
T 4gqb_B          188 CSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV--FVFGDENGTVSLVDTKSTSCVLSSAVHS----QCVT  261 (344)
T ss_dssp             EETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE--EEEEETTSEEEEEESCC--CCEEEECCS----SCEE
T ss_pred             eccccccccccccccceeeeeecceeeccceeeeecCCCCcc--eEEeccCCcEEEEECCCCcEEEEEcCCC----CCEE
Confidence            457999999999999987766655444445678888876653  7899999999999999999999999998    8999


Q ss_pred             EEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++ .+|++|+.|++|++||
T Consensus       262 ~v~fsp~g~~~lasgs~D~~i~vwd  286 (344)
T 4gqb_B          262 GLVFSPHSVPFLASLSEDCSLAVLD  286 (344)
T ss_dssp             EEEECSSSSCCEEEEETTSCEEEEC
T ss_pred             EEEEccCCCeEEEEEeCCCeEEEEE
Confidence            99999987 5799999999999997

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.84  E-value=2.3e-20  Score=113.22  Aligned_cols=56  Identities=14%  Similarity=0.216  Sum_probs=49.3

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeE-EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL-DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++++.|++|++||+.+++++.++.+|.    ..+. .++|+|++++|++|+.|++|++||
T Consensus       298 lASgS~DgTIkIWDl~tGk~l~tL~gH~----~~vvs~vafSPDG~~LaSGS~D~TIklWd  354 (356)
T 2w18_A          298 AAAILTSGTIAIWDLLLGQCTALLPPVS----DQHWSFVKWSGTDSHLLAGQKDGNIFVYH  354 (356)
T ss_dssp             EEEEETTSCEEEEETTTCSEEEEECCC------CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred             EEEEcCCCcEEEEECCCCcEEEEecCCC----CCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence            5888899999999999999999998887    5544 689999999999999999999996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.84  E-value=2.3e-20  Score=112.41  Aligned_cols=95  Identities=17%  Similarity=0.269  Sum_probs=84.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+++++....+..  |...+..+.|+|.+..   +++++.|+.|++||+.+++++..+..|.    ..|.
T Consensus       224 ~s~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~sp~~~~---l~s~s~D~~v~iwd~~~~~~~~~~~~h~----~~v~  294 (321)
T 3ow8_A          224 ASDDGYIKIYDVQHANLAGTLSG--HASWVLNVAFCPDDTH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQ----DQVW  294 (321)
T ss_dssp             ECTTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEE
T ss_pred             EcCCCeEEEEECCCcceeEEEcC--CCCceEEEEECCCCCE---EEEEeCCCcEEEEeCCCCEEEEEEcCCC----CcEE
Confidence            45789999999999888555544  4555777999998887   8999999999999999999999998888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..|++++.|++|++||
T Consensus       295 ~v~~s~~g~~l~s~~~d~~i~vwd  318 (321)
T 3ow8_A          295 GVKYNGNGSKIVSVGDDQEIHIYD  318 (321)
T ss_dssp             EEEECTTSSEEEEEETTCCEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCeEEEEe
Confidence            999999999999999999999997

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.84  E-value=1.6e-20  Score=112.18  Aligned_cols=95  Identities=22%  Similarity=0.303  Sum_probs=83.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...||+|++||+.+++.+..+..  +...+..+.|.|.+..   +++++.|+.|++||+.+++++..+.+|.    ..|.
T Consensus        31 ~~~dg~v~lWd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~s~s~d~~i~vwd~~~~~~~~~~~~h~----~~v~  101 (304)
T 2ynn_A           31 TLYSGRVELWNYETQVEVRSIQV--TETPVRAGKFIARKNW---IIVGSDDFRIRVFNYNTGEKVVDFEAHP----DYIR  101 (304)
T ss_dssp             EETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred             EcCCCcEEEEECCCCceeEEeec--cCCcEEEEEEeCCCCE---EEEECCCCEEEEEECCCCcEEEEEeCCC----CcEE
Confidence            35699999999999988665554  3445677889998887   8999999999999999999999999998    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++.++++|+.|++|++||
T Consensus       102 ~~~~~~~~~~l~sgs~D~~v~lWd  125 (304)
T 2ynn_A          102 SIAVHPTKPYVLSGSDDLTVKLWN  125 (304)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEE
T ss_pred             EEEEcCCCCEEEEECCCCeEEEEE
Confidence            999999999999999999999996

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.84  E-value=2.5e-20  Score=112.78  Aligned_cols=97  Identities=9%  Similarity=0.077  Sum_probs=83.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+++++.+..+....+...+..+.|+|.+..   +++++.|+.|++||+.+++.+..+.+|.    ..|.
T Consensus       244 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~---l~~g~~d~~i~vwd~~~~~~~~~~~~h~----~~v~  316 (340)
T 1got_B          244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL---LLAGYDDFNCNVWDALKADRAGVLAGHD----NRVS  316 (340)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred             EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE---EEEECCCCeEEEEEcccCcEeeEeecCC----CcEE
Confidence            45799999999999887655544333334667889998877   8999999999999999999888899898    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++|+.|++|++||
T Consensus       317 ~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          317 CLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEcCCCCEEEEEcCCccEEecC
Confidence            999999999999999999999997

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.83  E-value=1.6e-20  Score=114.20  Aligned_cols=97  Identities=20%  Similarity=0.276  Sum_probs=83.2

Q ss_pred             cCCCceEEEEeCccCceeeecc--cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARND--CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ...||+|++||+.+++.+....  ...|...+.++.|+|.+..   |++++.|+.|++||+.+++++..+.+|.    ..
T Consensus        99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~---l~sgs~d~~i~iwd~~~~~~~~~~~~h~----~~  171 (344)
T 4gqb_B           99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ---AVSGSKDICIKVWDLAQQVVLSSYRAHA----AQ  171 (344)
T ss_dssp             EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SC
T ss_pred             EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCE---EEEEeCCCeEEEEECCCCcEEEEEcCcC----Cc
Confidence            4579999999999987644332  3345666778999998887   8999999999999999999999999998    89


Q ss_pred             eEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      |.+++|+|++. .+++++.|++|++||
T Consensus       172 V~~~~~~~~~~~~l~s~s~D~~v~iwd  198 (344)
T 4gqb_B          172 VTCVAASPHKDSVFLSCSEDNRILLWD  198 (344)
T ss_dssp             EEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             eEEEEecCCCCCceeeecccccccccc
Confidence            99999999875 789999999999996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.83  E-value=7.8e-20  Score=110.07  Aligned_cols=94  Identities=17%  Similarity=0.260  Sum_probs=83.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+..+..  |...+..+.|+|.+..   +++++.|+.|++||+++++....+.+|.    ..|.+
T Consensus       183 ~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spd~~~---l~s~s~dg~i~iwd~~~~~~~~~~~~h~----~~v~~  253 (321)
T 3ow8_A          183 AIDGIINIFDIATGKLLHTLEG--HAMPIRSLTFSPDSQL---LVTASDDGYIKIYDVQHANLAGTLSGHA----SWVLN  253 (321)
T ss_dssp             ETTSCEEEEETTTTEEEEEECC--CSSCCCEEEECTTSCE---EEEECTTSCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred             cCCCeEEEEECCCCcEEEEEcc--cCCceeEEEEcCCCCE---EEEEcCCCeEEEEECCCcceeEEEcCCC----CceEE
Confidence            4689999999999988665554  4556788999998887   8999999999999999998888898888    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.++++++.|++|++||
T Consensus       254 ~~~sp~~~~l~s~s~D~~v~iwd  276 (321)
T 3ow8_A          254 VAFCPDDTHFVSSSSDKSVKVWD  276 (321)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEECCCCCEEEEEeCCCcEEEEe
Confidence            99999999999999999999996

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.83  E-value=3.7e-20  Score=114.53  Aligned_cols=95  Identities=17%  Similarity=0.323  Sum_probs=84.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+++++..+..  |...+..+.|+|.+..   +++++.|+.|++||+.+++++..+.+|.    ..|.
T Consensus       314 gs~D~~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~~~g~~---l~s~s~D~~i~vwd~~~~~~~~~~~~h~----~~v~  384 (410)
T 1vyh_C          314 GSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKF---ILSCADDKTLRVWDYKNKRCMKTLNAHE----HFVT  384 (410)
T ss_dssp             EETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSC---EEEEETTTEEEEECCTTSCCCEEEECCS----SCEE
T ss_pred             EeCCCeEEEEECCCCceEEEEEC--CCCcEEEEEEcCCCCE---EEEEeCCCeEEEEECCCCceEEEEcCCC----CcEE
Confidence            35689999999999998666654  4555677899998888   8999999999999999999999999998    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++.++++|+.|++|++|+
T Consensus       385 ~l~~~~~~~~l~sgs~D~~i~vW~  408 (410)
T 1vyh_C          385 SLDFHKTAPYVVTGSVDQTVKVWE  408 (410)
T ss_dssp             EEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEEcCCCCEEEEEeCCCcEEEEe
Confidence            999999999999999999999997

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.83  E-value=8.8e-20  Score=112.93  Aligned_cols=95  Identities=18%  Similarity=0.272  Sum_probs=81.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|++|++||+.++++...+..   +..+..+.|.+.+.... +++|+.|+.|++||+.+++++..+.+|.    ..|.+
T Consensus       298 s~D~~I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~~lv-~~sg~~d~~I~iwd~~~~~~v~~l~gH~----~~V~~  369 (420)
T 4gga_A          298 TSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELI-SGHGFAQNQLVIWKYPTMAKVAELKGHT----SRVLS  369 (420)
T ss_dssp             TTTCEEEEEETTTTEEEEEEEC---SSCEEEEEEETTTTEEE-EEECTTTCCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred             cCCCEEEEEeCCccccceeecc---ccceeeeeecCCCCeEE-EEEecCCCEEEEEECCCCcEEEEEcCCC----CCEEE
Confidence            4689999999999998666554   34567788888887731 1345689999999999999999999998    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.+|+||+.|++|++||
T Consensus       370 l~~spdg~~l~S~s~D~tvriWd  392 (420)
T 4gga_A          370 LTMSPDGATVASAAADETLRLWR  392 (420)
T ss_dssp             EEECTTSSCEEEEETTTEEEEEC
T ss_pred             EEEcCCCCEEEEEecCCeEEEEE
Confidence            99999999999999999999997

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.83  E-value=3.4e-20  Score=112.21  Aligned_cols=95  Identities=18%  Similarity=0.325  Sum_probs=83.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+++.+..+..  |...+..+.|+|.+..   +++++.|+.|++||++++++...+.+|.    ..|.
T Consensus       160 ~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~sg~~d~~v~~wd~~~~~~~~~~~~h~----~~v~  230 (340)
T 1got_B          160 SSGDTTCALWDIETGQQTTTFTG--HTGDVMSLSLAPDTRL---FVSGACDASAKLWDVREGMCRQTFTGHE----SDIN  230 (340)
T ss_dssp             EETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCSEEEEECCCS----SCEE
T ss_pred             EECCCcEEEEECCCCcEEEEEcC--CCCceEEEEECCCCCE---EEEEeCCCcEEEEECCCCeeEEEEcCCc----CCEE
Confidence            45799999999999988655544  4556777899998776   8999999999999999999888998888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++++.|++|++||
T Consensus       231 ~v~~~p~~~~l~s~s~d~~v~iwd  254 (340)
T 1got_B          231 AICFFPNGNAFATGSDDATCRLFD  254 (340)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEcCCCCEEEEEcCCCcEEEEE
Confidence            999999999999999999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.82  E-value=1e-19  Score=110.74  Aligned_cols=97  Identities=12%  Similarity=0.127  Sum_probs=82.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+++++.+..+....+...+..+.|+|.+..   +++++.|+.|++||+.+++.+..+.+|.    ..|.
T Consensus       258 ~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~---l~~g~~d~~i~vwd~~~~~~~~~l~~h~----~~v~  330 (354)
T 2pbi_B          258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL---LFAGYNDYTINVWDVLKGSRVSILFGHE----NRVS  330 (354)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCSEEEEECCCS----SCEE
T ss_pred             EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE---EEEEECCCcEEEEECCCCceEEEEECCC----CcEE
Confidence            45799999999998877555544322334556888888877   8999999999999999999888888888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++.+|++|+.|++|++|+
T Consensus       331 ~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          331 TLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EEEECCCCCEEEEEcCCCCEEecC
Confidence            999999999999999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.81  E-value=7.6e-20  Score=109.22  Aligned_cols=95  Identities=19%  Similarity=0.224  Sum_probs=81.0

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~v   81 (106)
                      ...|++|++||+.+++.+..+..  |...+..+.|+|.+..   +++++.|++|++||++++. ....+.+|.    ..|
T Consensus        73 ~s~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~sgs~D~~v~lWd~~~~~~~~~~~~~h~----~~v  143 (304)
T 2ynn_A           73 GSDDFRIRVFNYNTGEKVVDFEA--HPDYIRSIAVHPTKPY---VLSGSDDLTVKLWNWENNWALEQTFEGHE----HFV  143 (304)
T ss_dssp             EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSE---EEEEETTSCEEEEEGGGTTEEEEEECCCC----SCE
T ss_pred             ECCCCEEEEEECCCCcEEEEEeC--CCCcEEEEEEcCCCCE---EEEECCCCeEEEEECCCCcchhhhhcccC----CcE
Confidence            35799999999999998665554  4556778999998887   8999999999999998774 455677787    899


Q ss_pred             EEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|+| ++..+++|+.|++|++||
T Consensus       144 ~~v~~~p~~~~~l~sgs~D~~v~iwd  169 (304)
T 2ynn_A          144 MCVAFNPKDPSTFASGCLDRTVKVWS  169 (304)
T ss_dssp             EEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred             EEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            9999999 678999999999999996

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.81  E-value=6.3e-20  Score=113.51  Aligned_cols=95  Identities=17%  Similarity=0.274  Sum_probs=83.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+++....+..  |...+..+.|.|.+..   +++|+.|++|++||+.+++++..+.+|.    ..|.
T Consensus       126 ~s~Dg~i~vwd~~~~~~~~~l~~--h~~~V~~v~~~~~~~~---l~sgs~D~~i~iwd~~~~~~~~~~~~h~----~~V~  196 (410)
T 1vyh_C          126 ASEDATIKVWDYETGDFERTLKG--HTDSVQDISFDHSGKL---LASCSADMTIKLWDFQGFECIRTMHGHD----HNVS  196 (410)
T ss_dssp             EESSSCEEEEETTTCCCCEEECC--CSSCEEEEEECTTSSE---EEEEETTSCCCEEETTSSCEEECCCCCS----SCEE
T ss_pred             EeCCCeEEEEECCCCcEEEEEec--cCCcEEEEEEcCCCCE---EEEEeCCCeEEEEeCCCCceeEEEcCCC----CCEE
Confidence            35799999999999988555544  4556777999988776   8999999999999999999999999898    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++++.|++|++||
T Consensus       197 ~v~~~p~~~~l~s~s~D~~i~~wd  220 (410)
T 1vyh_C          197 SVSIMPNGDHIVSASRDKTIKMWE  220 (410)
T ss_dssp             EEEECSSSSEEEEEETTSEEEEEE
T ss_pred             EEEEeCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999996

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.81  E-value=1.6e-19  Score=110.11  Aligned_cols=94  Identities=12%  Similarity=0.147  Sum_probs=79.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+++++.+..+..  +...+..+.|+|.+...  |++++.|++|++||+++++++..+ +|.    ..|.+
T Consensus       246 ~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~--lasgs~D~~i~iwd~~~~~~~~~~-~H~----~~V~~  316 (357)
T 4g56_B          246 DETGNVSLVNIKNPDSAQTSAV--HSQNITGLAYSYHSSPF--LASISEDCTVAVLDADFSEVFRDL-SHR----DFVTG  316 (357)
T ss_dssp             ESSSCEEEEESSCGGGCEEECC--CSSCEEEEEECSSSSCC--EEEEETTSCEEEECTTSCEEEEEC-CCS----SCEEE
T ss_pred             ecccceeEEECCCCcEeEEEec--cceeEEEEEEcCCCCCE--EEEEeCCCEEEEEECCCCcEeEEC-CCC----CCEEE
Confidence            4689999999999888655544  45556778999987543  789999999999999998877554 577    89999


Q ss_pred             EEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+| ++..|++++.|++|++|+
T Consensus       317 vafsP~d~~~l~s~s~Dg~v~iW~  340 (357)
T 4g56_B          317 VAWSPLDHSKFTTVGWDHKVLHHH  340 (357)
T ss_dssp             EEECSSSTTEEEEEETTSCEEEEE
T ss_pred             EEEeCCCCCEEEEEcCCCeEEEEE
Confidence            99999 789999999999999996

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.81  E-value=1.4e-19  Score=109.48  Aligned_cols=97  Identities=23%  Similarity=0.352  Sum_probs=80.2

Q ss_pred             cCCCceEEEEeCccCce-----eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC
Q psy17135          3 KVPSSVIYIWTLLELQT-----YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~   77 (106)
                      ...|++|++||+.+.+.     ........|...+..+.|+|.+..   +++++.|++|++||+++++++..+.+|.   
T Consensus        45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~---l~s~s~D~~v~lwd~~~~~~~~~~~~h~---  118 (343)
T 2xzm_R           45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF---AISSSWDKTLRLWDLRTGTTYKRFVGHQ---  118 (343)
T ss_dssp             EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE---EEEEETTSEEEEEETTSSCEEEEEECCC---
T ss_pred             EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE---EEEEcCCCcEEEEECCCCcEEEEEcCCC---
Confidence            45799999999975431     111222334555677889988777   8999999999999999999999999898   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ..|.+++|+|++..+++++.|++|++||
T Consensus       119 -~~v~~v~~sp~~~~l~s~~~d~~i~~wd  146 (343)
T 2xzm_R          119 -SEVYSVAFSPDNRQILSAGAEREIKLWN  146 (343)
T ss_dssp             -SCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred             -CcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence             8999999999999999999999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.81  E-value=2.2e-19  Score=109.28  Aligned_cols=97  Identities=18%  Similarity=0.269  Sum_probs=81.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+++.+..+..  |...+..+.+.|... +..+++++.|+.|++||+++++++..+..|.    ..|.
T Consensus       172 ~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~-g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~----~~v~  244 (354)
T 2pbi_B          172 ASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSET-GNTFVSGGCDKKAMVWDMRSGQCVQAFETHE----SDVN  244 (354)
T ss_dssp             EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECCCSS-CCEEEEEETTSCEEEEETTTCCEEEEECCCS----SCEE
T ss_pred             EeCCCcEEEEeCCCCeEEEEEcC--CCCCeEEEEEEeCCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCC----CCeE
Confidence            45799999999999998666654  344455677776432 1127999999999999999999999998888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++++.|+++++||
T Consensus       245 ~v~~~p~~~~l~s~s~D~~v~lwd  268 (354)
T 2pbi_B          245 SVRYYPSGDAFASGSDDATCRLYD  268 (354)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEeCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999996

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.81  E-value=3e-19  Score=108.88  Aligned_cols=98  Identities=19%  Similarity=0.247  Sum_probs=83.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+++++.........+...+..+.|+|.+...  +++++.|+.|++||+++++++..+..|.    ..|.
T Consensus       200 ~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~--la~g~~d~~i~~wd~~~~~~~~~~~~~~----~~v~  273 (357)
T 4g56_B          200 CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT--FACGDETGNVSLVNIKNPDSAQTSAVHS----QNIT  273 (357)
T ss_dssp             EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE--EEEEESSSCEEEEESSCGGGCEEECCCS----SCEE
T ss_pred             eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce--EEEeecccceeEEECCCCcEeEEEeccc----eeEE
Confidence            356899999999998876665554455556678899886653  7899999999999999999999999888    8999


Q ss_pred             EEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++ .+|++++.|++|++||
T Consensus       274 ~l~~sp~~~~~lasgs~D~~i~iwd  298 (357)
T 4g56_B          274 GLAYSYHSSPFLASISEDCTVAVLD  298 (357)
T ss_dssp             EEEECSSSSCCEEEEETTSCEEEEC
T ss_pred             EEEEcCCCCCEEEEEeCCCEEEEEE
Confidence            99999976 5799999999999997

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.80  E-value=3.1e-19  Score=108.65  Aligned_cols=95  Identities=15%  Similarity=0.142  Sum_probs=79.1

Q ss_pred             cCCCceEEEEeCccCce----------------eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-EEEeeCCCcc
Q psy17135          3 KVPSSVIYIWTLLELQT----------------YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-IRLWNLDNKT   65 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-v~iwd~~~~~   65 (106)
                      ...||.|++||+.+++.                +..+  ..|...+.++.|+|.+..   +++++.|++ |++||+++++
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~h~~~v~~~~~s~~g~~---l~s~s~d~~~v~iwd~~~~~  229 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KAHTNPIKMVRLNRKSDM---VATCSQDGTIIRVFKTEDGV  229 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEE--CCCSSCEEEEEECTTSSE---EEEEETTCSEEEEEETTTCC
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEE--EccCCceEEEEECCCCCE---EEEEeCCCCEEEEEECCCCc
Confidence            35789999999998651                2222  335566778999998877   899999998 9999999999


Q ss_pred             chheec-c-ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 CVQEIT-A-HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 ~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++..+. + |.    ..|.+++|+|++.++++++.|++|++||
T Consensus       230 ~~~~~~~g~h~----~~v~~~~~s~~~~~l~s~s~d~~v~iw~  268 (355)
T 3vu4_A          230 LVREFRRGLDR----ADVVDMKWSTDGSKLAVVSDKWTLHVFE  268 (355)
T ss_dssp             EEEEEECTTCC----SCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred             EEEEEEcCCCC----CcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence            998887 4 77    8999999999999999999999999996

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.80  E-value=2.8e-19  Score=109.32  Aligned_cols=92  Identities=16%  Similarity=0.171  Sum_probs=76.1

Q ss_pred             eEEEEeCccCceee--ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCeEEE
Q psy17135          8 VIYIWTLLELQTYA--RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDV   84 (106)
Q Consensus         8 ~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~   84 (106)
                      ++++||+.......  ......+...+.++.|+|.+..   |++|+.|++|++||+++++++..+ .+|.    ..|+++
T Consensus       246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~---lasgs~D~~V~iwd~~~~~~~~~~~~gH~----~~V~~v  318 (365)
T 4h5i_A          246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL---AVLASNDNSIALVKLKDLSMSKIFKQAHS----FAITEV  318 (365)
T ss_dssp             EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE---EEEEETTSCEEEEETTTTEEEEEETTSSS----SCEEEE
T ss_pred             EEeecccccceecceeeeeecCCCCCeEeEEECCCCCc---eEEEcCCCEEEEEECCCCcEEEEecCccc----CCEEEE
Confidence            68889987655421  2223334555677899998887   899999999999999999988875 6788    899999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +|+|++++|+||+.|++|+|||
T Consensus       319 ~fSpdg~~laS~S~D~tvrvw~  340 (365)
T 4h5i_A          319 TISPDSTYVASVSAANTIHIIK  340 (365)
T ss_dssp             EECTTSCEEEEEETTSEEEEEE
T ss_pred             EECCCCCEEEEEeCCCeEEEEE
Confidence            9999999999999999999996

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.80  E-value=8.9e-19  Score=104.15  Aligned_cols=95  Identities=18%  Similarity=0.272  Sum_probs=79.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..+++|++||............   ...+..+.|.|.+.... +++++.|+.|++||+++++++..+.+|.    ..|.+
T Consensus       218 ~~~~~i~lwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~-~~sg~~d~~i~iwd~~~~~~~~~l~gH~----~~V~~  289 (318)
T 4ggc_A          218 TSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELI-SGHGFAQNQLVIWKYPTMAKVAELKGHT----SRVLS  289 (318)
T ss_dssp             TTTCEEEEEETTTCCEEEEEEC---SSCEEEEEEETTTTEEE-EEECTTTCCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred             CCCCEEEEEecccccccccccc---eeeeeeeeecccccceE-EEEEcCCCEEEEEECCCCcEEEEEcCCC----CCEEE
Confidence            4678999999998887444332   34466688888777632 2456789999999999999999999998    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.+|+||+.|++|++||
T Consensus       290 l~~spdg~~l~S~s~D~~v~iWd  312 (318)
T 4ggc_A          290 LTMSPDGATVASAAADETLRLWR  312 (318)
T ss_dssp             EEECTTSSCEEEEETTTEEEEEC
T ss_pred             EEEcCCCCEEEEEecCCeEEEEE
Confidence            99999999999999999999997

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.80  E-value=4.2e-19  Score=108.81  Aligned_cols=98  Identities=16%  Similarity=0.235  Sum_probs=79.9

Q ss_pred             cCCCceEEEEeCccCceeeeccc---CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDC---PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~   78 (106)
                      ...|++|++||+.+++.+..+..   ..|...+..+.+.+.....  +++|+.|+.|++||++. ++++..+.+|.    
T Consensus       176 ~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~--l~sgs~D~~v~~wd~~~~~~~~~~~~~h~----  249 (380)
T 3iz6_a          176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM--FISGSCDTTVRLWDLRITSRAVRTYHGHE----  249 (380)
T ss_dssp             ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE--EEEEETTSCEEEEETTTTCCCCEEECCCS----
T ss_pred             ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE--EEEEECCCeEEEEECCCCCcceEEECCcC----
Confidence            45799999999999988665532   2244455667777644333  89999999999999984 57788888888    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|++..+++++.|++|++||
T Consensus       250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd  277 (380)
T 3iz6_a          250 GDINSVKFFPDGQRFGTGSDDGTCRLFD  277 (380)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred             CCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence            8999999999999999999999999996

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.80  E-value=8.9e-19  Score=107.39  Aligned_cols=98  Identities=7%  Similarity=0.006  Sum_probs=80.6

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCC-----CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee----cc
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPEL-----NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI----TA   72 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~----~~   72 (106)
                      +...|++|++||+++++.+..+.....     ...+..+.|+|.+..   +++|+.|+.|++||..+++.+..+    .+
T Consensus       266 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~---l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~  342 (380)
T 3iz6_a          266 TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL---LFAGYSNGDCYVWDTLLAEMVLNLGTLQNS  342 (380)
T ss_dssp             EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE---EEEECTTSCEEEEETTTCCEEEEECCSCSS
T ss_pred             EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE---EEEEECCCCEEEEECCCCceEEEEecccCC
Confidence            346899999999999888665544221     123567899998887   899999999999999988776665    45


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.    ..|.+++|+|++..|++|+.|++|++|+
T Consensus       343 h~----~~v~~l~~s~dg~~l~sgs~D~~i~iW~  372 (380)
T 3iz6_a          343 HE----GRISCLGLSSDGSALCTGSWDKNLKIWA  372 (380)
T ss_dssp             CC----CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred             CC----CceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence            65    8999999999999999999999999996

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.79  E-value=3.2e-19  Score=107.16  Aligned_cols=96  Identities=16%  Similarity=0.285  Sum_probs=80.5

Q ss_pred             CcCCCceEEEEeCccCc-----eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc
Q psy17135          2 QKVPSSVIYIWTLLELQ-----TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK   76 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~   76 (106)
                      +...|++|++||+....     ++..+.  .|...+..+.|.|.+..   +++++.|++|++||+.+++++..+.+|.  
T Consensus        35 s~s~D~~v~~W~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s~dg~~---l~s~s~D~~v~~wd~~~~~~~~~~~~h~--  107 (319)
T 3frx_A           35 SASRDKTLISWKLTGDDQKFGVPVRSFK--GHSHIVQDCTLTADGAY---ALSASWDKTLRLWDVATGETYQRFVGHK--  107 (319)
T ss_dssp             EEETTSEEEEEEEEEETTEEEEEEEEEE--CCSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCS--
T ss_pred             EecCCccEEEecCCCCCccccccceEEe--CCcccEEEEEECCCCCE---EEEEeCCCEEEEEECCCCCeeEEEccCC--
Confidence            34679999999987532     222232  34555667889998877   8999999999999999999999999998  


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        ..|.+++|+|++..+++++.|++|++||
T Consensus       108 --~~v~~~~~~~~~~~l~s~s~D~~i~vwd  135 (319)
T 3frx_A          108 --SDVMSVDIDKKASMIISGSRDKTIKVWT  135 (319)
T ss_dssp             --SCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             --CcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence              8999999999999999999999999996

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.79  E-value=1.6e-19  Score=114.99  Aligned_cols=97  Identities=13%  Similarity=0.104  Sum_probs=80.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|+|||++++++...+........+..+.|+|.+..   +++++.|++|++||++++.++..+.+|.    ..|.
T Consensus       329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~---l~s~~~d~tv~lwd~~~~~~~~~l~gH~----~~V~  401 (524)
T 2j04_B          329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS---YIYSDGASSLRAVPSRAAFAVHPLVSRE----TTIT  401 (524)
T ss_dssp             EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE---EEEECSSSEEEEEETTCTTCCEEEEECS----SCEE
T ss_pred             eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe---EEEeCCCCcEEEEECcccccceeeecCC----CceE
Confidence            46799999999998776444433211123567899998777   7999999999999999998888888888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++|+.|++|++||
T Consensus       402 sva~Sp~g~~l~Sgs~Dgtv~lwd  425 (524)
T 2j04_B          402 AIGVSRLHPMVLAGSADGSLIITN  425 (524)
T ss_dssp             EEECCSSCCBCEEEETTTEEECCB
T ss_pred             EEEeCCCCCeEEEEECCCEEEEEe
Confidence            999999999999999999999996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.78  E-value=6.7e-19  Score=113.48  Aligned_cols=95  Identities=20%  Similarity=0.193  Sum_probs=81.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-------cccc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-------AHRK   75 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-------~~~~   75 (106)
                      ...|++|++||..++++...+..  |...+.++.|+|.+..   +++++.|++|++||+.+++++..+.       +|. 
T Consensus       166 ~s~D~~v~lwd~~~~~~~~~l~~--H~~~V~~v~fspdg~~---las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~-  239 (611)
T 1nr0_A          166 GSDDNTVAIFEGPPFKFKSTFGE--HTKFVHSVRYNPDGSL---FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS-  239 (611)
T ss_dssp             EETTSCEEEEETTTBEEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS-
T ss_pred             EeCCCeEEEEECCCCeEeeeecc--ccCceEEEEECCCCCE---EEEEECCCcEEEEECCCCcEeeeeccccccccccC-
Confidence            45789999999998887555443  5666778999998877   8999999999999999988777663       566 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.+++|+|++..|++++.|++|++||
T Consensus       240 ---~~V~~v~~spdg~~l~s~s~D~~v~lWd  267 (611)
T 1nr0_A          240 ---GSVFGLTWSPDGTKIASASADKTIKIWN  267 (611)
T ss_dssp             ---SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ---CCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence               8999999999999999999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.78  E-value=8.2e-19  Score=106.38  Aligned_cols=97  Identities=18%  Similarity=0.256  Sum_probs=80.3

Q ss_pred             cCCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~   79 (106)
                      ...|++|++||+.++....... ...|...+..+.|+|.+..   |++++.|+.+++|+..++  +++..+.+|.    .
T Consensus        34 ~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~---l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~----~  106 (345)
T 3fm0_A           34 CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY---LASASFDATTCIWKKNQDDFECVTTLEGHE----N  106 (345)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSE---EEEEETTSCEEEEEECCC-EEEEEEECCCS----S
T ss_pred             EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCE---EEEEECCCcEEEEEccCCCeEEEEEccCCC----C
Confidence            4579999999998876432322 2335556777999998877   899999999999998876  4567788888    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.+++|+|++.+|++++.|++|++||
T Consensus       107 ~v~~v~~sp~~~~l~s~s~D~~v~iwd  133 (345)
T 3fm0_A          107 EVKSVAWAPSGNLLATCSRDKSVWVWE  133 (345)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CceEEEEeCCCCEEEEEECCCeEEEEE
Confidence            999999999999999999999999996

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.78  E-value=1.6e-18  Score=104.51  Aligned_cols=97  Identities=11%  Similarity=0.150  Sum_probs=73.2

Q ss_pred             cCCCceEEEEeCccCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-------ccchheeccc
Q psy17135          3 KVPSSVIYIWTLLELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-------KTCVQEITAH   73 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-------~~~~~~~~~~   73 (106)
                      ...|++|++||+.++.  ....+....|...+..+.|+|.+..   +++++.|+.|++|++..       .+++..+.+|
T Consensus        30 ~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~---las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h  106 (330)
T 2hes_X           30 GSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSL---LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH  106 (330)
T ss_dssp             EESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSE---EEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred             EcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCE---EEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence            4579999999998753  3222322225556777999998877   89999999999999853       2345667778


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .    ..|.+++|+|++.+|++|+.|++|++||
T Consensus       107 ~----~~V~~v~~sp~g~~las~s~D~~v~iwd  135 (330)
T 2hes_X          107 E----NEVKGVAWSNDGYYLATCSRDKSVWIWE  135 (330)
T ss_dssp             ------CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             C----CcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence            7    8999999999999999999999999996

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.78  E-value=4.4e-18  Score=101.18  Aligned_cols=99  Identities=15%  Similarity=0.315  Sum_probs=82.0

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc---------
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK---------   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~---------   75 (106)
                      .|++|+|||+.+++++..+..+.|...+.++.|+|.+..   +++|+.|+.|++|++++++++..+.+|..         
T Consensus        43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~---l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~  119 (318)
T 4ggc_A           43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNY---LAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS  119 (318)
T ss_dssp             ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET
T ss_pred             eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCE---EEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC
Confidence            388999999999998877777666666778999998887   89999999999999999887766554431         


Q ss_pred             ----------------------------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 ----------------------------KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ----------------------------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                  .|...+..+.+++++..+++++.|+.|++||
T Consensus       120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd  178 (318)
T 4ggc_A          120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  178 (318)
T ss_dssp             TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence                                        1346677888999999999999999999986

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.78  E-value=4.3e-18  Score=102.98  Aligned_cols=95  Identities=13%  Similarity=0.079  Sum_probs=79.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch-heecc-ccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV-QEITA-HRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~-~~~~~-~~~~~~~~   80 (106)
                      ...|++|++||+.+++.+...... +...+.++.|+|.+..   +++|+.|+.|++||+++++.+ ..+.. |.    ..
T Consensus       145 ~s~dg~i~~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~---lasg~~dg~i~iwd~~~~~~~~~~~~~~h~----~~  216 (343)
T 3lrv_A          145 ADNRGTIGFQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLL---LALYSPDGILDVYNLSSPDQASSRFPVDEE----AK  216 (343)
T ss_dssp             EETTCCEEEEESSSSCEEEEECCC-SSCCCCEEEECTTSCE---EEEECTTSCEEEEESSCTTSCCEECCCCTT----SC
T ss_pred             EeCCCcEEEEECCCCcEEEEEecC-CCCceEEEEECCCCCE---EEEEcCCCEEEEEECCCCCCCccEEeccCC----CC
Confidence            457999999999999884444332 3345778999998877   899999999999999998877 67776 77    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++|+|++.++++++ ++.|++||
T Consensus       217 v~~l~fs~~g~~l~s~~-~~~v~iwd  241 (343)
T 3lrv_A          217 IKEVKFADNGYWMVVEC-DQTVVCFD  241 (343)
T ss_dssp             EEEEEECTTSSEEEEEE-SSBEEEEE
T ss_pred             EEEEEEeCCCCEEEEEe-CCeEEEEE
Confidence            99999999999999999 45999996

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.77  E-value=2.8e-18  Score=109.17  Aligned_cols=92  Identities=25%  Similarity=0.360  Sum_probs=79.4

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|++|++||. +++.+..+..  |...+..+.|+|.+..   |++++.|+.|++||. +++++..+.+|.    ..|.+
T Consensus       486 ~~d~~i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~dg~~---l~s~~~dg~v~lwd~-~~~~~~~~~~h~----~~v~~  554 (577)
T 2ymu_A          486 SDDKTVKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQT---IASASDDKTVKLWNR-NGQLLQTLTGHS----SSVWG  554 (577)
T ss_dssp             ETTSEEEEEET-TSCEEEEEEC--CSSCEEEEEECTTSSC---EEEEETTSEEEEECT-TSCEEEEEECCS----SCEEE
T ss_pred             eCCCEEEEEcC-CCCEEEEEeC--CCCCEEEEEEcCCCCE---EEEEECcCEEEEEeC-CCCEEEEEcCCC----CCEEE
Confidence            46899999995 5666555544  4556777999998888   899999999999996 678888899998    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++++|+|++.|++|++||
T Consensus       555 ~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          555 VAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEcCCCCEEEEEeCCCEEEEeC
Confidence            99999999999999999999998

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.77  E-value=2e-18  Score=103.00  Aligned_cols=95  Identities=21%  Similarity=0.423  Sum_probs=83.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|++||+.+++.+..+..  |...+..+.|+|.+..   +++++.|+.|++||+++++++..+..|.    ..+.
T Consensus        83 ~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~v~  153 (312)
T 4ery_A           83 ASDDKTLKIWDVSSGKCLKTLKG--HSNYVFCCNFNPQSNL---IVSGSFDESVRIWDVKTGKCLKTLPAHS----DPVS  153 (312)
T ss_dssp             EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEE
T ss_pred             ECCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCE---EEEEeCCCcEEEEECCCCEEEEEecCCC----CcEE
Confidence            35789999999999988665554  4555677889998877   8999999999999999999888888888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.|+|++..+++++.|+.|++||
T Consensus       154 ~~~~~~~~~~l~~~~~d~~i~~wd  177 (312)
T 4ery_A          154 AVHFNRDGSLIVSSSYDGLCRIWD  177 (312)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEcCCCCEEEEEeCCCcEEEEE
Confidence            999999999999999999999996

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.77  E-value=1.9e-18  Score=103.05  Aligned_cols=95  Identities=15%  Similarity=0.312  Sum_probs=83.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|++||+.+++....+..  |...+..+.|+|.+..   +++++.|+.|++||+++++++..+..|.    ..+.
T Consensus        41 ~~~dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~v~  111 (312)
T 4ery_A           41 SSADKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSNL---LVSASDDKTLKIWDVSSGKCLKTLKGHS----NYVF  111 (312)
T ss_dssp             EETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred             eeCCCeEEEEeCCCcccchhhcc--CCCceEEEEEcCCCCE---EEEECCCCEEEEEECCCCcEEEEEcCCC----CCEE
Confidence            35789999999999887555543  4555777999998877   8999999999999999999998998888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++++.|+.|++||
T Consensus       112 ~~~~~~~~~~l~s~~~d~~i~iwd  135 (312)
T 4ery_A          112 CCNFNPQSNLIVSGSFDESVRIWD  135 (312)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEE
T ss_pred             EEEEcCCCCEEEEEeCCCcEEEEE
Confidence            999999999999999999999996

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.77  E-value=3.2e-18  Score=105.30  Aligned_cols=94  Identities=16%  Similarity=0.222  Sum_probs=82.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++....+.  .|...+..+.|+|.+..   +++++.|+.|++||+.+++.+..+..|.    ..|.+
T Consensus       116 ~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~---l~s~s~d~~i~iwd~~~~~~~~~~~~h~----~~v~~  186 (420)
T 3vl1_A          116 TTEGDIKVLDSNFNLQREIDQ--AHVSEITKLKFFPSGEA---LISSSQDMQLKIWSVKDGSNPRTLIGHR----ATVTD  186 (420)
T ss_dssp             ETTSCEEEECTTSCEEEEETT--SSSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCCCEEEECCS----SCEEE
T ss_pred             ECCCCEEEEeCCCcceeeecc--cccCccEEEEECCCCCE---EEEEeCCCeEEEEeCCCCcCceEEcCCC----CcEEE
Confidence            468999999999888744433  34566778999998776   8999999999999999999998998888    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++..+++++.|+.+++||
T Consensus       187 ~~~~~~~~~l~s~~~d~~v~iwd  209 (420)
T 3vl1_A          187 IAIIDRGRNVLSASLDGTIRLWE  209 (420)
T ss_dssp             EEEETTTTEEEEEETTSCEEEEE
T ss_pred             EEEcCCCCEEEEEcCCCcEEEeE
Confidence            99999999999999999999996

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.77  E-value=1.4e-18  Score=104.24  Aligned_cols=97  Identities=16%  Similarity=0.173  Sum_probs=76.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~   78 (106)
                      ...|++|++||+.+++.........|...+..+.|.+.  +..   |++++.|++|++||+++++  .+..+.+|.    
T Consensus        31 gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~---l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~----  103 (316)
T 3bg1_A           31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNI---LASCSYDRKVIIWREENGTWEKSHEHAGHD----  103 (316)
T ss_dssp             EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSC---EEEEETTSCEEEECCSSSCCCEEEEECCCS----
T ss_pred             EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCE---EEEEECCCEEEEEECCCCcceEEEEccCCC----
Confidence            45799999999988754222333335556777888753  555   8999999999999998874  455667777    


Q ss_pred             CCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|+  +.++++++.|++|++||
T Consensus       104 ~~V~~v~~~p~~~g~~lasgs~D~~i~lwd  133 (316)
T 3bg1_A          104 SSVNSVCWAPHDYGLILACGSSDGAISLLT  133 (316)
T ss_dssp             SCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred             CceEEEEECCCCCCcEEEEEcCCCCEEEEe
Confidence            89999999997  78999999999999996

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.76  E-value=1.5e-18  Score=106.85  Aligned_cols=99  Identities=12%  Similarity=0.183  Sum_probs=79.4

Q ss_pred             CCCceEEEEeCccCceeee---cccCCCCCCCCeeEeeeCC-----CCceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135          4 VPSSVIYIWTLLELQTYAR---NDCPELNSEPPACQTIPSS-----NISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      ..|++|+|||+.+++....   .....|...+..+.|.|..     ..+.+|++++.|++|++||++++.++..+..|. 
T Consensus       108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~-  186 (393)
T 4gq1_A          108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS-  186 (393)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS-
T ss_pred             eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC-
Confidence            4699999999998865332   1234466677889999832     233448999999999999999888777777787 


Q ss_pred             cCCCCeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                         ..+.+++|+|++. .+++++.|++|++||
T Consensus       187 ---~~v~~v~~~p~~~~~l~~~~~d~~v~~wd  215 (393)
T 4gq1_A          187 ---SPGISVQFRPSNPNQLIVGERNGNIRIFD  215 (393)
T ss_dssp             ---SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred             ---CCcEEEEECCCCCceEEecCCCCEEEEEE
Confidence               7999999999875 799999999999996

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.76  E-value=3.8e-18  Score=111.18  Aligned_cols=98  Identities=19%  Similarity=0.276  Sum_probs=81.2

Q ss_pred             CcCCCceEEEEeCccCcee---eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCC
Q psy17135          2 QKVPSSVIYIWTLLELQTY---ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      +...|++|++||+.+....   .......|...+.++.|+|.+..   +++++.|+.|++||+.+++++..+.+|.    
T Consensus       400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~---l~sgs~Dg~v~vwd~~~~~~~~~~~~h~----  472 (694)
T 3dm0_A          400 SASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF---ALSGSWDGELRLWDLAAGVSTRRFVGHT----  472 (694)
T ss_dssp             EEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCS----
T ss_pred             EEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE---EEEEeCCCcEEEEECCCCcceeEEeCCC----
Confidence            3567999999999764321   11122234555677899998877   8999999999999999999999999898    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|++..+++++.|++|++||
T Consensus       473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd  500 (694)
T 3dm0_A          473 KDVLSVAFSLDNRQIVSASRDRTIKLWN  500 (694)
T ss_dssp             SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence            8999999999999999999999999997

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.75  E-value=4.8e-18  Score=101.13  Aligned_cols=99  Identities=15%  Similarity=0.198  Sum_probs=75.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC----------CceEEEeeCCCCcEEEeeCCCcc----chhe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN----------ISLFDSRPGHDCSIRLWNLDNKT----CVQE   69 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~s~~~d~~v~iwd~~~~~----~~~~   69 (106)
                      ..|++|++||++++..........|...+..+.|.|...          .+..|++++.|+.|++||+++++    ....
T Consensus       120 s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~  199 (297)
T 2pm7_B          120 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST  199 (297)
T ss_dssp             ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred             ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE
Confidence            468999999998764322222333455567788988631          11238999999999999998765    4556


Q ss_pred             eccccccCCCCeEEEEEcCCC---CEEEEecCCCeEEEcC
Q psy17135         70 ITAHRKKFDESILDVAFHPSK---PFIASAGADGLAKVFV  106 (106)
Q Consensus        70 ~~~~~~~~~~~v~~~~~~~~~---~~~~s~~~d~~i~iwd  106 (106)
                      +.+|.    ..|.+++|+|++   .++++++.|++|++||
T Consensus       200 l~~H~----~~V~~v~~sp~~~~~~~las~s~D~~v~iWd  235 (297)
T 2pm7_B          200 LEGHS----DWVRDVAWSPTVLLRSYMASVSQDRTCIIWT  235 (297)
T ss_dssp             ECCCS----SCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred             ecCCC----CceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence            77787    899999999984   7899999999999996

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.75  E-value=8.4e-18  Score=101.41  Aligned_cols=95  Identities=20%  Similarity=0.332  Sum_probs=72.5

Q ss_pred             cCCCceEEEEeCccC-------ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc----cchheec
Q psy17135          3 KVPSSVIYIWTLLEL-------QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK----TCVQEIT   71 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~----~~~~~~~   71 (106)
                      ...|++|++||+...       +.+..+  ..|...+..+.|+|.+..   |++++.|+.|++||++..    +++..+.
T Consensus        76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~g~~---las~s~D~~v~iwd~~~~~~~~~~~~~~~  150 (330)
T 2hes_X           76 GSFDSTVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAWSNDGYY---LATCSRDKSVWIWETDESGEEYECISVLQ  150 (330)
T ss_dssp             EETTSCEEEEEC-------CCCEEEEEE--C----CEEEEEECTTSCE---EEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred             EeCCCcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEECCCCCE---EEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence            356999999999542       222222  335556778999998877   899999999999999532    3456677


Q ss_pred             cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.    ..|.+++|+|++.+|++++.|++|++||
T Consensus       151 ~h~----~~v~~v~~~p~~~~l~s~s~D~~i~iW~  181 (330)
T 2hes_X          151 EHS----QDVKHVIWHPSEALLASSSYDDTVRIWK  181 (330)
T ss_dssp             CCS----SCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             cCC----CceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence            787    8999999999999999999999999995

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.75  E-value=9.1e-18  Score=99.94  Aligned_cols=95  Identities=16%  Similarity=0.173  Sum_probs=74.7

Q ss_pred             cCCCceEEEEeCccC--ceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheecccccc
Q psy17135          3 KVPSSVIYIWTLLEL--QTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~   76 (106)
                      ...|++|++||+.+.  +.+..+.  .|...+..+.|.+.  +..   |++++.|++|++||+++++  .+..+..|.  
T Consensus        27 ~s~D~~v~iw~~~~~~~~~~~~l~--gH~~~V~~v~~s~~~~g~~---l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~--   99 (297)
T 2pm7_B           27 CSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTI---LASCSYDGKVMIWKEENGRWSQIAVHAVHS--   99 (297)
T ss_dssp             EETTSCEEEEEBCSSCBCCCEEEC--CCSSCEEEEEECCGGGCSE---EEEEETTTEEEEEEBSSSCBCCCEEECCCS--
T ss_pred             EeCCCEEEEEecCCCCcEEEEEEc--cccCCeEEEEecCCCcCCE---EEEEcCCCEEEEEEcCCCceEEEEEeecCC--
Confidence            457999999999754  3333333  35556677888764  444   8999999999999998874  455666777  


Q ss_pred             CCCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                        ..|.+++|+|+  +..+++++.|++|++||
T Consensus       100 --~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd  129 (297)
T 2pm7_B          100 --ASVNSVQWAPHEYGPMLLVASSDGKVSVVE  129 (297)
T ss_dssp             --SCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred             --CceeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence              89999999997  88999999999999996

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.75  E-value=1.2e-17  Score=102.73  Aligned_cols=94  Identities=18%  Similarity=0.291  Sum_probs=77.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchhee-------cccc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-------TAHR   74 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-------~~~~   74 (106)
                      ...|++|++||+.+++....+..   ...+..+.++| .+..   +++++.|+.|++||+++++.+..+       .+|.
T Consensus       183 ~s~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~---l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~  256 (393)
T 1erj_A          183 GSGDRTVRIWDLRTGQCSLTLSI---EDGVTTVAVSPGDGKY---IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK  256 (393)
T ss_dssp             EETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSTTCCE---EEEEETTSCEEEEETTTCCEEEEEC------CCCS
T ss_pred             ecCCCcEEEEECCCCeeEEEEEc---CCCcEEEEEECCCCCE---EEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC
Confidence            45799999999999987555443   34466788888 4444   899999999999999998876665       3455


Q ss_pred             ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                          ..|.+++|+|++..+++++.|++|++||
T Consensus       257 ----~~v~~v~~~~~g~~l~s~s~d~~v~~wd  284 (393)
T 1erj_A          257 ----DSVYSVVFTRDGQSVVSGSLDRSVKLWN  284 (393)
T ss_dssp             ----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ----CCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence                8999999999999999999999999996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.74  E-value=1.4e-17  Score=107.45  Aligned_cols=101  Identities=13%  Similarity=0.131  Sum_probs=79.3

Q ss_pred             cCCCceEEEEeCccCceeeecccC-----CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc----
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCP-----ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH----   73 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~----   73 (106)
                      ...|++|++||+.+++.+..+...     .|...+..+.|+|.+..   +++++.|++|++||+.+++++..+..+    
T Consensus       208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~---l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~  284 (611)
T 1nr0_A          208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK---IASASADKTIKIWNVATLKVEKTIPVGTRIE  284 (611)
T ss_dssp             EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCSSGG
T ss_pred             EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE---EEEEeCCCeEEEEeCCCCceeeeecCCCCcc
Confidence            457999999999998876555321     35556777999998887   899999999999999987655433210    


Q ss_pred             -----------------------------------cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 -----------------------------------RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 -----------------------------------~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                         ...|...|.+++|+|++..+++++.|++|++||
T Consensus       285 ~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd  352 (611)
T 1nr0_A          285 DQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD  352 (611)
T ss_dssp             GCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence                                               012337899999999999999999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.74  E-value=9.3e-18  Score=101.76  Aligned_cols=97  Identities=23%  Similarity=0.384  Sum_probs=78.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~   79 (106)
                      ...|++|++||+.++..........|...+..+.|+|.+..   |++++.|+.|++||++++.   ++..+..|.    .
T Consensus        79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~---l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~----~  151 (345)
T 3fm0_A           79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL---LATCSRDKSVWVWEVDEEDEYECVSVLNSHT----Q  151 (345)
T ss_dssp             EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE---EEEEETTSCEEEEEECTTSCEEEEEEECCCC----S
T ss_pred             EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE---EEEEECCCeEEEEECCCCCCeEEEEEecCcC----C
Confidence            35689999999987653223333345666778999998877   8999999999999998763   355667777    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.+++|+|++.++++++.|++|++||
T Consensus       152 ~v~~~~~~p~~~~l~s~s~d~~i~~w~  178 (345)
T 3fm0_A          152 DVKHVVWHPSQELLASASYDDTVKLYR  178 (345)
T ss_dssp             CEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            999999999999999999999999996

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.74  E-value=1.5e-17  Score=99.98  Aligned_cols=97  Identities=23%  Similarity=0.319  Sum_probs=77.0

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC---CceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN---ISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      ...|++|++||++.. ++..+..  |...+..+.+.|...   ....+++++.|+.|++||+++.+....+.+|.    .
T Consensus       125 ~s~D~~i~vwd~~~~-~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~----~  197 (319)
T 3frx_A          125 GSRDKTIKVWTIKGQ-CLATLLG--HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN----S  197 (319)
T ss_dssp             EETTSCEEEEETTSC-EEEEECC--CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC----S
T ss_pred             EeCCCeEEEEECCCC-eEEEEec--cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC----C
Confidence            457999999999743 4333332  444566678877543   22237999999999999999988888888888    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.+++|+|++.++++++.|++|++||
T Consensus       198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd  224 (319)
T 3frx_A          198 NINTLTASPDGTLIASAGKDGEIMLWN  224 (319)
T ss_dssp             CEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999996

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.74  E-value=2.4e-17  Score=99.38  Aligned_cols=95  Identities=21%  Similarity=0.283  Sum_probs=81.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchhee---ccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEI---TAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~~~   78 (106)
                      ...||.|++||+.+++.+..+..  |...+..+.|+| .+..   +++++.|+.|++||+++++.+..+   ..|.    
T Consensus        91 ~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----  161 (366)
T 3k26_A           91 AGSRGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNL---LLSVSKDHALRLWNIQTDTLVAIFGGVEGHR----  161 (366)
T ss_dssp             EETTCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTE---EEEEETTSCEEEEETTTTEEEEEECSTTSCS----
T ss_pred             ecCCCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCE---EEEEeCCCeEEEEEeecCeEEEEeccccccc----
Confidence            35789999999999988666553  455677799999 5555   899999999999999999887777   5676    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|++..+++++.|+.+++||
T Consensus       162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d  189 (366)
T 3k26_A          162 DEVLSADYDLLGEKIMSCGMDHSLKLWR  189 (366)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CceeEEEECCCCCEEEEecCCCCEEEEE
Confidence            8999999999999999999999999996

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.74  E-value=1.3e-17  Score=102.55  Aligned_cols=96  Identities=14%  Similarity=0.243  Sum_probs=80.0

Q ss_pred             cCCCceEEEEeCccCc-------eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee--ccc
Q psy17135          3 KVPSSVIYIWTLLELQ-------TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI--TAH   73 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~--~~~   73 (106)
                      ...|++|++||+.++.       .+..+.  .|...+..+.|+|.+...  +++++.|+.|++||+++++++..+  ..|
T Consensus       100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  175 (402)
T 2aq5_A          100 GSEDCTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNV--LLSAGCDNVILVWDVGTGAAVLTLGPDVH  175 (402)
T ss_dssp             EETTSEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTE--EEEEETTSCEEEEETTTTEEEEEECTTTC
T ss_pred             EeCCCeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCE--EEEEcCCCEEEEEECCCCCccEEEecCCC
Confidence            3568999999999873       322332  245567779999987432  799999999999999999988888  677


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .    ..|.+++|+|++..+++++.|+.|++||
T Consensus       176 ~----~~v~~~~~~~~~~~l~~~~~d~~i~iwd  204 (402)
T 2aq5_A          176 P----DTIYSVDWSRDGALICTSCRDKRVRVIE  204 (402)
T ss_dssp             C----SCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred             C----CceEEEEECCCCCEEEEEecCCcEEEEe
Confidence            7    8999999999999999999999999996

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.73  E-value=5.2e-17  Score=101.00  Aligned_cols=99  Identities=7%  Similarity=0.005  Sum_probs=75.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..||+|+|||+.+++.........|...+.++.|+|.....  |++++.|++|++||++++........+.  ....+.+
T Consensus       139 s~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~--l~s~s~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~  214 (435)
T 4e54_B          139 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQ--FYASSMEGTTRLQDFKGNILRVFASSDT--INIWFCS  214 (435)
T ss_dssp             ETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTE--EEEECSSSCEEEEETTSCEEEEEECCSS--CSCCCCC
T ss_pred             eCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCE--EEEEeCCCEEEEeeccCCceeEEeccCC--CCccEEE
Confidence            57999999999887654445554566778889999864433  8999999999999998654322222222  1146788


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.++++|+.|+.|++||
T Consensus       215 ~~~~~~~~~l~~g~~dg~i~~wd  237 (435)
T 4e54_B          215 LDVSASSRMVVTGDNVGNVILLN  237 (435)
T ss_dssp             EEEETTTTEEEEECSSSBEEEEE
T ss_pred             EEECCCCCEEEEEeCCCcEeeec
Confidence            99999999999999999999996

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.73  E-value=4.7e-17  Score=100.76  Aligned_cols=92  Identities=11%  Similarity=0.236  Sum_probs=81.4

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      |++|+|||+.+++....+....|...+.++.|+|.+..   +++|+.|+.|++||+.+++++..+.+|.    ..+.+++
T Consensus       124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~---lasgs~Dg~v~iWd~~~~~~~~~~~~h~----~~v~~~s  196 (420)
T 4gga_A          124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNY---LAVGTSSAEVQLWDVQQQKRLRNMTSHS----ARVGSLS  196 (420)
T ss_dssp             TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEEEE
T ss_pred             CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCE---EEEEECCCeEEEEEcCCCcEEEEEeCCC----CceEEEe
Confidence            78999999999998777777666666788999998887   8999999999999999999999999988    7888887


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++  +..+++++.|+.+++||
T Consensus       197 ~~--~~~l~sgs~d~~i~~~d  215 (420)
T 4gga_A          197 WN--SYILSSGSRSGHIHHHD  215 (420)
T ss_dssp             EE--TTEEEEEETTSEEEEEE
T ss_pred             eC--CCEEEEEeCCCceeEee
Confidence            75  67899999999999985

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.73  E-value=2.3e-17  Score=98.99  Aligned_cols=100  Identities=13%  Similarity=0.202  Sum_probs=74.3

Q ss_pred             cCCCceEEEEeCccCcee-eecccCCCCCCCCeeEeeeCCCC-ceEEEeeCCCCcEEEeeCCCc---c-chheecccccc
Q psy17135          3 KVPSSVIYIWTLLELQTY-ARNDCPELNSEPPACQTIPSSNI-SLFDSRPGHDCSIRLWNLDNK---T-CVQEITAHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~v~iwd~~~~---~-~~~~~~~~~~~   76 (106)
                      ...|++|++||+.+.... .......|...+..+.|+|.+.. ..++++++.|++|++|++++.   . ....+..|.  
T Consensus       185 gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~--  262 (316)
T 3bg1_A          185 GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN--  262 (316)
T ss_dssp             CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECS--
T ss_pred             ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCC--
Confidence            456899999999755211 12233335566777999997621 122799999999999998763   1 233455566  


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        ..|.+++|+|++..|++++.|++|++|+
T Consensus       263 --~~v~~v~~sp~g~~las~~~D~~v~lw~  290 (316)
T 3bg1_A          263 --DVVWHVSWSITANILAVSGGDNKVTLWK  290 (316)
T ss_dssp             --SCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred             --CcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence              8999999999999999999999999995

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.73  E-value=8.5e-18  Score=112.54  Aligned_cols=96  Identities=7%  Similarity=-0.032  Sum_probs=75.9

Q ss_pred             cCCCceEEEEeCccCceee--ecc-------cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--------
Q psy17135          3 KVPSSVIYIWTLLELQTYA--RND-------CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--------   65 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--------   65 (106)
                      ...|++|++||+.++....  .+.       ...|...+.++.|+|.+..   |++|+.|++|++|++.+++        
T Consensus       453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~---LAsgs~DgtV~lwd~~~~~~~~~~~~~  529 (902)
T 2oaj_A          453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLE---LAVSIETGDVVLFKYEVNQFYSVENRP  529 (902)
T ss_dssp             EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTE---EEEEETTSCEEEEEEEECCC-------
T ss_pred             ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCe---EEEEecCcEEEEEEecCccccCccccC
Confidence            4579999999998875311  011       0134456778999999988   8999999999999987652        


Q ss_pred             -------------------------------------chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 -------------------------------------CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 -------------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                           ++..+..|.    ..|++++|+|+| +||+|+.|++|++||
T Consensus       530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~----~~V~svafSpdG-~lAsgs~D~tv~lwd  602 (902)
T 2oaj_A          530 ESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK----GKTSAINNSNIG-FVGIAYAAGSLMLID  602 (902)
T ss_dssp             --------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS----CSEEEEEECBTS-EEEEEETTSEEEEEE
T ss_pred             CCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC----CcEEEEEecCCc-EEEEEeCCCcEEEEE
Confidence                                                 244556666    899999999999 999999999999997

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.73  E-value=5.1e-17  Score=99.97  Aligned_cols=95  Identities=16%  Similarity=0.263  Sum_probs=79.3

Q ss_pred             CCceEEEEeCccCceeeecccCC----------------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPE----------------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ   68 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~   68 (106)
                      .++++++|++.+++.+..+....                +...+.++.|+|.+..   +++++.|+.|++||+.+++.+.
T Consensus        83 ~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~---l~s~~~d~~i~iwd~~~~~~~~  159 (393)
T 1erj_A           83 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF---LATGAEDRLIRIWDIENRKIVM  159 (393)
T ss_dssp             CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEE
T ss_pred             cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE---EEEEcCCCeEEEEECCCCcEEE
Confidence            46789999999988765554321                0112456889998877   8999999999999999999888


Q ss_pred             eeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         69 EITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+|.    ..|.+++|+|++..+++++.|++|++||
T Consensus       160 ~~~~h~----~~v~~~~~~p~~~~l~s~s~d~~v~iwd  193 (393)
T 1erj_A          160 ILQGHE----QDIYSLDYFPSGDKLVSGSGDRTVRIWD  193 (393)
T ss_dssp             EECCCS----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEccCC----CCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence            899898    8999999999999999999999999996

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.72  E-value=4.7e-17  Score=98.47  Aligned_cols=99  Identities=16%  Similarity=0.293  Sum_probs=75.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC-------ceEEEeeCCCCcEEEeeCCCccchheeccccc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI-------SLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      ...|++|++||+.............|...+.++.|.|....       ..++++++.|+.|++||. +.+....+..|. 
T Consensus       136 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~-  213 (343)
T 2xzm_R          136 AGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHE-  213 (343)
T ss_dssp             EETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCS-
T ss_pred             EcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcc-
Confidence            35789999999985443222222234455667888887521       123799999999999994 455666777887 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.+++|+|++.+|++++.|+.|++||
T Consensus       214 ---~~v~~~~~s~~g~~l~sgs~dg~v~iwd  241 (343)
T 2xzm_R          214 ---SNVNHLSISPNGKYIATGGKDKKLLIWD  241 (343)
T ss_dssp             ---SCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             ---ccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence               8999999999999999999999999996

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.72  E-value=1.8e-17  Score=100.82  Aligned_cols=97  Identities=8%  Similarity=0.005  Sum_probs=74.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~   79 (106)
                      ...|+.|++||+.++..........|...+..+.|+|.+..   +++++.|+.|++||+.++.   ....+..|.    .
T Consensus        29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~---l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~----~  101 (377)
T 3dwl_C           29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNR---IVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN----R  101 (377)
T ss_dssp             CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCC---EEEEETTSSEEEC------CCCCEEECCCCS----S
T ss_pred             ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCE---EEEEeCCCeEEEEEcCCCCceeeeeEecccC----C
Confidence            45799999999998832113333345666778999998877   8999999999999999876   455666677    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.+++|+|++..+++++.|+.|++||
T Consensus       102 ~v~~~~~~~~~~~l~~~~~d~~i~iwd  128 (377)
T 3dwl_C          102 AATFVRWSPNEDKFAVGSGARVISVCY  128 (377)
T ss_dssp             CEEEEECCTTSSCCEEEESSSCEEECC
T ss_pred             ceEEEEECCCCCEEEEEecCCeEEEEE
Confidence            999999999999999999999999997

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.72  E-value=9.5e-17  Score=96.80  Aligned_cols=97  Identities=12%  Similarity=0.162  Sum_probs=76.5

Q ss_pred             cCCCceEEEEeCccCce--------------eeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCccc
Q psy17135          3 KVPSSVIYIWTLLELQT--------------YARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKTC   66 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~~   66 (106)
                      ...|+.|++||+.+++.              +..+..  +...+..+.|.|.  +..   +++++.|+.|++||+.++++
T Consensus       247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~---l~~~~~dg~i~vwd~~~~~~  321 (366)
T 3k26_A          247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKM---LALGNQVGKLYVWDLEVEDP  321 (366)
T ss_dssp             ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSE---EEEECTTSCEEEEECCSSSG
T ss_pred             EecCCEEEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcE---EEEEecCCcEEEEECCCCCC
Confidence            35699999999987654              222222  3455677888888  666   89999999999999998876


Q ss_pred             hh----eeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         67 VQ----EITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        67 ~~----~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..    .+..|.  +...|.+++|+|++.++++++.|+.|++||
T Consensus       322 ~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  363 (366)
T 3k26_A          322 HKAKCTTLTHHK--CGAAIRQTSFSRDSSILIAVCDDASIWRWD  363 (366)
T ss_dssp             GGCEEEEECCTT--CCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ccccceEEcccc--cCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence            54    565552  017999999999999999999999999996

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.71  E-value=1.1e-16  Score=99.53  Aligned_cols=97  Identities=15%  Similarity=0.134  Sum_probs=76.6

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +...|++|++||++++..........+.....++.|+|.+..   +++|+.|+.|++||++ ++.+..+..|.    ..|
T Consensus       182 s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~g~~dg~i~~wd~~-~~~~~~~~~h~----~~v  253 (435)
T 4e54_B          182 ASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM---VVTGDNVGNVILLNMD-GKELWNLRMHK----KKV  253 (435)
T ss_dssp             EECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE---EEEECSSSBEEEEESS-SCBCCCSBCCS----SCE
T ss_pred             EEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE---EEEEeCCCcEeeeccC-cceeEEEeccc----ceE
Confidence            346799999999987655333333223334566888888877   8999999999999986 45677788888    899


Q ss_pred             EEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|++. ++++++.|+.|++||
T Consensus       254 ~~v~~~p~~~~~~~s~s~d~~v~iwd  279 (435)
T 4e54_B          254 THVALNPCCDWFLATASVDQTVKIWD  279 (435)
T ss_dssp             EEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred             EeeeecCCCceEEEEecCcceeeEEe
Confidence            9999999876 688999999999996

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.71  E-value=5.9e-17  Score=97.06  Aligned_cols=97  Identities=19%  Similarity=0.196  Sum_probs=74.0

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-----ccC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-----KKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~   77 (106)
                      ...|++|++||+.+.+.+..+..   ...+..+.|.|.+ .   +++++.|+.|++||++++..+..+..+.     ..+
T Consensus       233 ~s~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~-~---~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h  305 (340)
T 4aow_A          233 GGKDGQAMLWDLNEGKHLYTLDG---GDIINALCFSPNR-Y---WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAE  305 (340)
T ss_dssp             EETTCEEEEEETTTTEEEEEEEC---SSCEEEEEECSSS-S---EEEEEETTEEEEEETTTTEEEEEECCC-------CC
T ss_pred             EeCCCeEEEEEeccCceeeeecC---CceEEeeecCCCC-c---eeeccCCCEEEEEECCCCeEEEeccccceeeeccCC
Confidence            35789999999999988666554   3345567777754 3   5777789999999999876655443211     112


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...|.+++|+|++++|++|+.|+.|++||
T Consensus       306 ~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~  334 (340)
T 4aow_A          306 PPQCTSLAWSADGQTLFAGYTDNLVRVWQ  334 (340)
T ss_dssp             CCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence            27899999999999999999999999996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.71  E-value=1.4e-16  Score=97.33  Aligned_cols=93  Identities=15%  Similarity=0.184  Sum_probs=79.8

Q ss_pred             ceEEEEeCccCceeeecccCC-----------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec----
Q psy17135          7 SVIYIWTLLELQTYARNDCPE-----------LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT----   71 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~----   71 (106)
                      +.|++||+.+++.+..+....           |...+..+.|+|.+..   +++++.|+.|++||+++++++..+.    
T Consensus       258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  334 (397)
T 1sq9_A          258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET---LCSAGWDGKLRFWDVKTKERITTLNMHCD  334 (397)
T ss_dssp             EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSE---EEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred             ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCE---EEEEeCCCeEEEEEcCCCceeEEEecccC
Confidence            899999999998866655421           4555777999998877   8999999999999999999888887    


Q ss_pred             --cc---------------cccCCCCeEEEEEcCCC----------CEEEEecCCCeEEEcC
Q psy17135         72 --AH---------------RKKFDESILDVAFHPSK----------PFIASAGADGLAKVFV  106 (106)
Q Consensus        72 --~~---------------~~~~~~~v~~~~~~~~~----------~~~~s~~~d~~i~iwd  106 (106)
                        .|               .    ..|.+++|+|++          ..+++++.|+.|++|+
T Consensus       335 ~~~~~~~~~~g~~~~~~~~~----~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~  392 (397)
T 1sq9_A          335 DIEIEEDILAVDEHGDSLAE----PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  392 (397)
T ss_dssp             GCSSGGGCCCBCTTSCBCSS----CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             cccchhhhhccccccccccC----CceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence              66               5    899999999998          7999999999999996

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.71  E-value=1.8e-17  Score=102.63  Aligned_cols=96  Identities=7%  Similarity=0.103  Sum_probs=80.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~   82 (106)
                      ..|+.|++||+++++.+..+....|...+.++.|+|.+..   +++++.|+.|++||+++++++..+. .|.    ..|.
T Consensus       189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~  261 (437)
T 3gre_A          189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV---LILGTTRGIIDIWDIRFNVLIRSWSFGDH----APIT  261 (437)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE---EEEEETTSCEEEEETTTTEEEEEEBCTTC----EEEE
T ss_pred             eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE---EEEEcCCCeEEEEEcCCccEEEEEecCCC----CceE
Confidence            4689999999999998777766434556778999998777   8999999999999999998888775 555    6899


Q ss_pred             EEEEc----CCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFH----PSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~----~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++++    |++.++++++.|+.|++||
T Consensus       262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd  289 (437)
T 3gre_A          262 HVEVCQFYGKNSVIVVGGSSKTFLTIWN  289 (437)
T ss_dssp             EEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred             EEEeccccCCCccEEEEEcCCCcEEEEE
Confidence            99665    4677999999999999996

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.71  E-value=2e-17  Score=100.60  Aligned_cols=97  Identities=15%  Similarity=0.149  Sum_probs=70.6

Q ss_pred             cCCCceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheecc-ccccC
Q psy17135          3 KVPSSVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITA-HRKKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~-~~~~~   77 (106)
                      ...|++|++||+.+++ .........|...+..+.|+|.+..   +++++.|+.|++||+++++   ....+.. |.   
T Consensus        73 ~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~---  146 (377)
T 3dwl_C           73 CSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDK---FAVGSGARVISVCYFEQENDWWVSKHLKRPLR---  146 (377)
T ss_dssp             EETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSC---CEEEESSSCEEECCC-----CCCCEEECSSCC---
T ss_pred             EeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCE---EEEEecCCeEEEEEECCcccceeeeEeecccC---
Confidence            3568999999999877 1112333335556777999998877   7999999999999999876   3666766 66   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ..|.+++|+|++.++++++.|+.+++||
T Consensus       147 -~~v~~~~~~~~~~~l~~~~~d~~i~iwd  174 (377)
T 3dwl_C          147 -STILSLDWHPNNVLLAAGCADRKAYVLS  174 (377)
T ss_dssp             -SCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred             -CCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence             8999999999999999999999999996

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.70  E-value=8.1e-17  Score=102.76  Aligned_cols=94  Identities=15%  Similarity=0.225  Sum_probs=80.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee----------CCCCceEEEeeCCCCcEEEeeCCCc-cchheecc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP----------SSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITA   72 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~   72 (106)
                      ..|+.|++||+.+++.+..+... |...+..+.|+|          .+..   +++++.|+.|++||+.++ +++..+.+
T Consensus       507 ~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~---l~~~~~dg~i~iw~~~~~~~~~~~~~~  582 (615)
T 1pgu_A          507 DVMGKILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDL---VATGSLDTNIFIYSVKRPMKIIKALNA  582 (615)
T ss_dssp             ETTSCEEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCE---EEEEETTSCEEEEESSCTTCCEEETTS
T ss_pred             CCCCeEEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCE---EEEEcCCCcEEEEECCCCceechhhhc
Confidence            46899999999999985554431 455677799999          6666   899999999999999987 67888888


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.    ..|.+++|+|++. +++++.|+.|++|+
T Consensus       583 h~----~~v~~l~~s~~~~-l~s~~~d~~v~iw~  611 (615)
T 1pgu_A          583 HK----DGVNNLLWETPST-LVSSGADACIKRWN  611 (615)
T ss_dssp             ST----TCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred             Cc----cceEEEEEcCCCC-eEEecCCceEEEEe
Confidence            88    8999999999999 99999999999996

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.70  E-value=3e-17  Score=102.56  Aligned_cols=98  Identities=12%  Similarity=0.101  Sum_probs=76.0

Q ss_pred             cCCCceEEEEeCccC--------ceeeec-ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135          3 KVPSSVIYIWTLLEL--------QTYARN-DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~   73 (106)
                      ...|++|++||+.++        +.+... ....|...+..+.|+|.....  +++++.|++|++||++++..+.....|
T Consensus       114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~--las~s~Dg~v~iwD~~~~~~~~~~~~~  191 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM--VAVCLADGSIAVLQVTETVKVCATLPS  191 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE--EEEEETTSCEEEEEESSSEEEEEEECG
T ss_pred             cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE--EEEEECCCeEEEEEcCCCcceeeccCC
Confidence            456999999999765        111111 122245567779999984332  899999999999999988665555566


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .    ..+.+++|+|++.+|++|+.|+.|++||
T Consensus       192 ~----~~v~~v~wspdg~~lasgs~dg~v~iwd  220 (434)
T 2oit_A          192 T----VAVTSVCWSPKGKQLAVGKQNGTVVQYL  220 (434)
T ss_dssp             G----GCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             C----CceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence            6    7999999999999999999999999997

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.70  E-value=1.9e-16  Score=97.37  Aligned_cols=97  Identities=18%  Similarity=0.265  Sum_probs=77.4

Q ss_pred             cCCCceEEEEeCccCceee-ec-ccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCc-------cchheecc
Q psy17135          3 KVPSSVIYIWTLLELQTYA-RN-DCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNK-------TCVQEITA   72 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~-~~-~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~-------~~~~~~~~   72 (106)
                      ...||.|++||+....... .. ....|...+..+.|+| .+..   +++++.|+.|++||+.++       +++..+.+
T Consensus        53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~---l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~  129 (402)
T 2aq5_A           53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNV---IASGSEDCTVMVWEIPDGGLVLPLREPVITLEG  129 (402)
T ss_dssp             CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTE---EEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred             EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCE---EEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence            4679999999997643321 11 2233556677799999 5555   899999999999999987       55677778


Q ss_pred             ccccCCCCeEEEEEcCCC-CEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      |.    ..|.+++|+|++ ..+++++.|+.|++||
T Consensus       130 h~----~~v~~~~~~p~~~~~l~s~~~dg~i~iwd  160 (402)
T 2aq5_A          130 HT----KRVGIVAWHPTAQNVLLSAGCDNVILVWD  160 (402)
T ss_dssp             CS----SCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred             CC----CeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence            87    899999999997 6999999999999996

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.70  E-value=9.9e-17  Score=98.40  Aligned_cols=96  Identities=17%  Similarity=0.262  Sum_probs=78.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC----ccchheeccccccCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN----KTCVQEITAHRKKFDE   79 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~   79 (106)
                      ..|+.|++||+.+++.........+...+..+.|+|.+..   +++++.|+.|++|++.+    .+.+..+..|.    .
T Consensus        42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~----~  114 (416)
T 2pm9_A           42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKI---IAGALDNGSLELYSTNEANNAINSMARFSNHS----S  114 (416)
T ss_dssp             CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSC---EEEEESSSCEEEECCSSTTSCCCEEEECCCSS----S
T ss_pred             CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCe---EEEEccCCeEEEeecccccccccchhhccCCc----c
Confidence            6789999999998764222222234556778999998887   89999999999999987    34677777787    8


Q ss_pred             CeEEEEEcCC-CCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPS-KPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~-~~~~~s~~~d~~i~iwd  106 (106)
                      .|.+++|+|+ +.++++++.|+.|++||
T Consensus       115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd  142 (416)
T 2pm9_A          115 SVKTVKFNAKQDNVLASGGNNGEIFIWD  142 (416)
T ss_dssp             CCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred             ceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence            9999999998 88999999999999997

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.69  E-value=1.1e-16  Score=99.83  Aligned_cols=94  Identities=12%  Similarity=0.223  Sum_probs=80.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...||+|++||+.+++.+..+..  |...+..+.|.|.+ .   +++++.|+.|++||+++++++..+.+|.    ..|.
T Consensus       138 gs~dg~i~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~-~---l~s~s~dg~i~vwd~~~~~~~~~~~~h~----~~v~  207 (464)
T 3v7d_B          138 GADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGG-I---LVSGSTDRTVRVWDIKKGCCTHVFEGHN----STVR  207 (464)
T ss_dssp             EETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSTT-E---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEE
T ss_pred             EcCCCcEEEEECCCCcEEEEEeC--CCcCEEEEEEcCCC-E---EEEEeCCCCEEEEECCCCcEEEEECCCC----CccE
Confidence            45799999999999998666554  45567778887766 3   7999999999999999999998998888    8999


Q ss_pred             EEEEc--CCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFH--PSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~--~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+  +++..+++++.|+.+++||
T Consensus       208 ~l~~~~~~~~~~l~s~s~d~~i~vwd  233 (464)
T 3v7d_B          208 CLDIVEYKNIKYIVTGSRDNTLHVWK  233 (464)
T ss_dssp             EEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred             EEEEecCCCCCEEEEEcCCCcEEEee
Confidence            99998  5778999999999999996

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.69  E-value=2e-16  Score=93.72  Aligned_cols=93  Identities=19%  Similarity=0.215  Sum_probs=79.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|++||+.+++.+..+..  |...+..+.|+|.+ .   +++++.|+.|++||+++++++..+..|.    ..+.
T Consensus       201 ~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~---l~~~~~dg~v~iwd~~~~~~~~~~~~~~----~~i~  270 (313)
T 3odt_A          201 CSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNG-D---IVSCGEDRTVRIWSKENGSLKQVITLPA----ISIW  270 (313)
T ss_dssp             EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTS-C---EEEEETTSEEEEECTTTCCEEEEEECSS----SCEE
T ss_pred             ccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCC-C---EEEEecCCEEEEEECCCCceeEEEeccC----ceEE
Confidence            35789999999999998666654  45557778899977 4   6899999999999999999988888887    7999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++. +++++.|+.|++||
T Consensus       271 ~~~~~~~~~-~~~~~~dg~i~iw~  293 (313)
T 3odt_A          271 SVDCMSNGD-IIVGSSDNLVRIFS  293 (313)
T ss_dssp             EEEECTTSC-EEEEETTSCEEEEE
T ss_pred             EEEEccCCC-EEEEeCCCcEEEEe
Confidence            999999998 66789999999996

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.69  E-value=2.6e-16  Score=93.99  Aligned_cols=96  Identities=18%  Similarity=0.251  Sum_probs=79.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.........+...+..+.|.|.+..   +++++.|+.|++||+++++.+..+..|.    ..+.+
T Consensus       116 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---l~~~~~dg~v~~~d~~~~~~~~~~~~~~----~~i~~  188 (337)
T 1gxr_A          116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV---CFSCCSDGNIAVWDLHNQTLVRQFQGHT----DGASC  188 (337)
T ss_dssp             ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred             cCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCE---EEEEeCCCcEEEEeCCCCceeeeeeccc----CceEE
Confidence            4689999999998874333333334555667889997777   8999999999999999999888888887    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++..+++++.|+.+++||
T Consensus       189 ~~~~~~~~~l~~~~~dg~i~~~d  211 (337)
T 1gxr_A          189 IDISNDGTKLWTGGLDNTVRSWD  211 (337)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEECCCCCEEEEEecCCcEEEEE
Confidence            99999999999999999999996

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.69  E-value=2.2e-16  Score=103.81  Aligned_cols=94  Identities=23%  Similarity=0.310  Sum_probs=83.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..||.|++||+.+++.+..+..  |...+..+.|+|.+..   +++++.|+.|++||+.+++.+..+..|.    ..|.+
T Consensus        32 ~~~g~v~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~---l~~~~~dg~i~vw~~~~~~~~~~~~~~~----~~v~~  102 (814)
T 3mkq_A           32 LYSGRVEIWNYETQVEVRSIQV--TETPVRAGKFIARKNW---IIVGSDDFRIRVFNYNTGEKVVDFEAHP----DYIRS  102 (814)
T ss_dssp             ETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEEE
T ss_pred             eCCCEEEEEECCCCceEEEEec--CCCcEEEEEEeCCCCE---EEEEeCCCeEEEEECCCCcEEEEEecCC----CCEEE
Confidence            4689999999999988666654  4556778999998887   8999999999999999999888898888    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++..+++++.|+.+++||
T Consensus       103 ~~~s~~~~~l~~~~~dg~i~vw~  125 (814)
T 3mkq_A          103 IAVHPTKPYVLSGSDDLTVKLWN  125 (814)
T ss_dssp             EEECSSSSEEEEEETTSEEEEEE
T ss_pred             EEEeCCCCEEEEEcCCCEEEEEE
Confidence            99999999999999999999996

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.69  E-value=2e-16  Score=100.67  Aligned_cols=93  Identities=25%  Similarity=0.330  Sum_probs=79.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|+|||. +++++..+..  |...+.++.|+|.+..   |++++.|+.|++||. +++++..+.+|.    ..|.
T Consensus        34 ~~~d~~v~iWd~-~~~~~~~l~g--h~~~V~~l~fspdg~~---las~~~d~~i~vWd~-~~~~~~~~~~~~----~~v~  102 (577)
T 2ymu_A           34 ASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDGQT---IASASDDKTVKLWNR-NGQLLQTLTGHS----SSVR  102 (577)
T ss_dssp             EETTSEEEEECT-TSCEEEEEEC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEET-TSCEEEEECCCS----SCEE
T ss_pred             EeCCCEEEEEEC-CCCEEEEEeC--CCCCEEEEEECCCCCE---EEEEeCCCEEEEEEC-CCCEEEEEECCC----CCEE
Confidence            357899999995 6777665554  4556777999998877   899999999999996 577788888888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++++.|+.+++|+
T Consensus       103 ~~~~s~d~~~l~~~~~d~~~~~~~  126 (577)
T 2ymu_A          103 GVAFSPDGQTIASASDDKTVKLWN  126 (577)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEECCCCCEEEEEcCCCceeecc
Confidence            999999999999999999999985

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.69  E-value=2e-16  Score=95.39  Aligned_cols=95  Identities=13%  Similarity=0.179  Sum_probs=77.1

Q ss_pred             cCCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|+.|++||+.+ +..+. .....|...+..+.|+|.+..   +++++.|+.|++||+.+++.+. +..|.    ..|
T Consensus        60 ~~~dg~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~-~~~~~----~~v  130 (368)
T 3mmy_A           60 GSWANDVRCWEVQDSGQTIP-KAQQMHTGPVLDVCWSDDGSK---VFTASCDKTAKMWDLSSNQAIQ-IAQHD----APV  130 (368)
T ss_dssp             EETTSEEEEEEECTTSCEEE-EEEEECSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEE-EEECS----SCE
T ss_pred             ECCCCcEEEEEcCCCCceeE-EEeccccCCEEEEEECcCCCE---EEEEcCCCcEEEEEcCCCCcee-ecccc----Cce
Confidence            35689999999997 44431 222234556778999998777   8999999999999999888665 44576    899


Q ss_pred             EEEEE--cCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAF--HPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~--~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|  +|++..+++++.|+.|++||
T Consensus       131 ~~~~~~~~~~~~~l~~~~~dg~i~vwd  157 (368)
T 3mmy_A          131 KTIHWIKAPNYSCVMTGSWDKTLKFWD  157 (368)
T ss_dssp             EEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred             EEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence            99999  88999999999999999997

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.69  E-value=1.3e-16  Score=95.17  Aligned_cols=97  Identities=18%  Similarity=0.255  Sum_probs=76.3

Q ss_pred             cCCCceEEEEeCccCceee--ecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCc---------cchhe
Q psy17135          3 KVPSSVIYIWTLLELQTYA--RNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNK---------TCVQE   69 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~---------~~~~~   69 (106)
                      ...||.|++||+.++....  ......|...+..+.|+|.  +..   +++++.|+.|++||++++         +.+..
T Consensus        29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~---l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~  105 (351)
T 3f3f_A           29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRI---IASASYDKTVKLWEEDPDQEECSGRRWNKLCT  105 (351)
T ss_dssp             EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSE---EEEEETTSCEEEEEECTTSCTTSSCSEEEEEE
T ss_pred             eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCE---EEEEcCCCeEEEEecCCCcccccccCcceeee
Confidence            3568999999998764211  1222234556777899884  555   899999999999999876         34566


Q ss_pred             eccccccCCCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         70 ITAHRKKFDESILDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        70 ~~~~~~~~~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                      +..|.    ..+.+++|+|+  +..+++++.|+.|++||
T Consensus       106 ~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd  140 (351)
T 3f3f_A          106 LNDSK----GSLYSVKFAPAHLGLKLACLGNDGILRLYD  140 (351)
T ss_dssp             ECCCS----SCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred             ecccC----CceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence            66777    89999999999  99999999999999996

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.68  E-value=2.7e-16  Score=102.55  Aligned_cols=99  Identities=19%  Similarity=0.298  Sum_probs=79.2

Q ss_pred             cCCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|++|++||+.......... ...|...+.++.|+|.+... .+++++.|+.|++||++++++...+.+|.    ..|
T Consensus       490 ~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~h~----~~v  564 (694)
T 3dm0_A          490 ASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP-TIVSASWDKTVKVWNLSNCKLRSTLAGHT----GYV  564 (694)
T ss_dssp             EETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC-EEEEEETTSCEEEEETTTCCEEEEECCCS----SCE
T ss_pred             EeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc-eEEEEeCCCeEEEEECCCCcEEEEEcCCC----CCE
Confidence            4679999999987654322222 12244456678888876322 26999999999999999999888898888    899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|++.++++++.|+.|++||
T Consensus       565 ~~v~~spdg~~l~sg~~Dg~i~iwd  589 (694)
T 3dm0_A          565 STVAVSPDGSLCASGGKDGVVLLWD  589 (694)
T ss_dssp             EEEEECTTSSEEEEEETTSBCEEEE
T ss_pred             EEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            9999999999999999999999996

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.68  E-value=6.4e-16  Score=94.32  Aligned_cols=95  Identities=9%  Similarity=0.053  Sum_probs=77.4

Q ss_pred             cCCCceEEEEeCccCceeeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|+.|++||+.+... ..+... .+...+..+.|+|.+..   +++++.|+.|++||+ +++++..+..|.    ..|
T Consensus       137 ~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~i~i~d~-~~~~~~~~~~h~----~~v  207 (383)
T 3ei3_B          137 SSIRGATTLRDFSGSVI-QVFAKTDSWDYWYCCVDVSVSRQM---LATGDSTGRLLLLGL-DGHEIFKEKLHK----AKV  207 (383)
T ss_dssp             EETTTEEEEEETTSCEE-EEEECCCCSSCCEEEEEEETTTTE---EEEEETTSEEEEEET-TSCEEEEEECSS----SCE
T ss_pred             EeCCCEEEEEECCCCce-EEEeccCCCCCCeEEEEECCCCCE---EEEECCCCCEEEEEC-CCCEEEEeccCC----CcE
Confidence            35789999999996433 333332 22345667899998877   899999999999999 577788888888    899


Q ss_pred             EEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      .+++|+|++. .+++++.|+.|++||
T Consensus       208 ~~~~~~~~~~~~l~s~~~d~~i~iwd  233 (383)
T 3ei3_B          208 THAEFNPRCDWLMATSSVDATVKLWD  233 (383)
T ss_dssp             EEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred             EEEEECCCCCCEEEEEeCCCEEEEEe
Confidence            9999999998 899999999999996

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.68  E-value=3.5e-16  Score=94.62  Aligned_cols=97  Identities=9%  Similarity=0.038  Sum_probs=74.3

Q ss_pred             cCCCceEEEEeCc---------cCceeeecccCCCCCCCCeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchheec
Q psy17135          3 KVPSSVIYIWTLL---------ELQTYARNDCPELNSEPPACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT   71 (106)
Q Consensus         3 ~~~d~~i~iwd~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~   71 (106)
                      ...|++|++|+..         +++.+...... +...+..+.|+|  .+..   +++++.|+.|++||+++++++....
T Consensus        91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---l~s~s~dg~i~~wd~~~~~~~~~~~  166 (343)
T 3lrv_A           91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVD-SANEIIYMYGHNEVNTEY---FIWADNRGTIGFQSYEDDSQYIVHS  166 (343)
T ss_dssp             ECSTTEEEEEETTTEEEEEETTTCCEEEEEECC-CSSCEEEEECCC---CCE---EEEEETTCCEEEEESSSSCEEEEEC
T ss_pred             ecCCCeEEEEEccCceEEeecCCcceeEEeecC-CCCCEEEEEcCCCCCCCE---EEEEeCCCcEEEEECCCCcEEEEEe
Confidence            4678999999765         44433333332 234566788888  7766   8999999999999999988766554


Q ss_pred             cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..   ..+.+++|+|++.++++|+.|+.|++||
T Consensus       167 ~~~~---~~i~~~~~~pdg~~lasg~~dg~i~iwd  198 (343)
T 3lrv_A          167 AKSD---VEYSSGVLHKDSLLLALYSPDGILDVYN  198 (343)
T ss_dssp             CCSS---CCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred             cCCC---CceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            4431   5799999999999999999999999997

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.68  E-value=1.4e-16  Score=97.31  Aligned_cols=97  Identities=14%  Similarity=0.228  Sum_probs=82.1

Q ss_pred             cCCCceEEEEeCccCceeeecccC-CC---CCCCCeeEeeeCCCCceEEEeeCCC---CcEEEeeCCCccchheecc---
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCP-EL---NSEPPACQTIPSSNISLFDSRPGHD---CSIRLWNLDNKTCVQEITA---   72 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~s~~~d---~~v~iwd~~~~~~~~~~~~---   72 (106)
                      ...|+.|++||+.+++.+..+... .|   ...+..+.|+|.+..   +++++.|   +.|++||+++++++..+..   
T Consensus       203 ~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~---l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~  279 (397)
T 1sq9_A          203 GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL---LAIAHDSNSFGCITLYETEFGERIGSLSVPTH  279 (397)
T ss_dssp             ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE---EEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred             EeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCE---EEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence            357899999999998886665541 13   445677899998777   8999999   9999999999998888887   


Q ss_pred             ----------ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 ----------HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ----------~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                |.    ..+.+++|+|++.++++++.|+.|++||
T Consensus       280 ~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iwd  319 (397)
T 1sq9_A          280 SSQASLGEFAHS----SWVMSLSFNDSGETLCSAGWDGKLRFWD  319 (397)
T ss_dssp             ------CCBSBS----SCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             cccccccccccC----CcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence                      76    8999999999999999999999999996

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.68  E-value=2e-16  Score=100.87  Aligned_cols=96  Identities=13%  Similarity=0.084  Sum_probs=72.8

Q ss_pred             cCCCceEEEEeCccCceee---------ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheecc
Q psy17135          3 KVPSSVIYIWTLLELQTYA---------RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITA   72 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~   72 (106)
                      ...||+|++||+.++....         ......|...+.++.|++. ..   |++|+.||+|++||++++. +...+..
T Consensus       231 ~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~---lasgs~DgtV~lWD~~~~~~~~~~~~~  306 (524)
T 2j04_B          231 VSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT---VVCGFKNGFVAEFDLTDPEVPSFYDQV  306 (524)
T ss_dssp             EETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE---EEEEETTSEEEEEETTBCSSCSEEEEC
T ss_pred             EecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce---EEEEeCCCEEEEEECCCCCCceEEeec
Confidence            3468999999998764310         0122224455667888874 33   7999999999999999764 4455778


Q ss_pred             ccccCCCCeEEE--EEcCCC-CEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDV--AFHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~--~~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      |.    ..|.++  .|+|++ .+|+|++.|++|++||
T Consensus       307 H~----~~V~sv~~~~s~~g~~~laS~S~D~tvklWD  339 (524)
T 2j04_B          307 HD----SYILSVSTAYSDFEDTVVSTVAVDGYFYIFN  339 (524)
T ss_dssp             SS----SCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred             cc----ccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence            87    899999  568887 8899999999999997

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.68  E-value=3.3e-16  Score=99.99  Aligned_cols=93  Identities=16%  Similarity=0.234  Sum_probs=80.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc-ccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA-HRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~v~~~   84 (106)
                      |+.|++||+.+++... .....|...+..+.|+|.+..   +++++.|+.|++||+.+++++..+.. |.    ..|.++
T Consensus       466 d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~---l~~~~~dg~i~iw~~~~~~~~~~~~~~h~----~~v~~~  537 (615)
T 1pgu_A          466 GNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETY---IAAGDVMGKILLYDLQSREVKTSRWAFRT----SKINAI  537 (615)
T ss_dssp             TSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEECCSCCCS----SCEEEE
T ss_pred             CCeEEEEECCCccccc-cccCCccCceEEEEECCCCCE---EEEcCCCCeEEEeeCCCCcceeEeecCCC----CceeEE
Confidence            8999999999877642 334445566777999998887   89999999999999999998888877 77    899999


Q ss_pred             EEcC----------CCCEEEEecCCCeEEEcC
Q psy17135         85 AFHP----------SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~----------~~~~~~s~~~d~~i~iwd  106 (106)
                      +|+|          ++.++++++.|+.|++||
T Consensus       538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~  569 (615)
T 1pgu_A          538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYS  569 (615)
T ss_dssp             EECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred             EEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence            9999          999999999999999996

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.67  E-value=2.7e-16  Score=95.21  Aligned_cols=94  Identities=16%  Similarity=0.190  Sum_probs=76.4

Q ss_pred             CCCceEEEEeCc--cCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccC
Q psy17135          4 VPSSVIYIWTLL--ELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKF   77 (106)
Q Consensus         4 ~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~   77 (106)
                      ..|+.|++||+.  +++.+..+  ..|...+..+.|.+.  +..   +++++.|+.|++||+.+++  .+..+..|.   
T Consensus        30 ~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---  101 (379)
T 3jrp_A           30 SSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTI---LASCSYDGKVLIWKEENGRWSQIAVHAVHS---  101 (379)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSE---EEEEETTSCEEEEEEETTEEEEEEEECCCS---
T ss_pred             ECCCcEEEEecCCCcceeeeEe--cCCCCcEEEEEeCCCCCCCE---EEEeccCCEEEEEEcCCCceeEeeeecCCC---
Confidence            468999999998  44443333  334556677888876  555   8999999999999999886  666777777   


Q ss_pred             CCCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                       ..+.+++|+|+  +..+++++.|+.|++||
T Consensus       102 -~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d  131 (379)
T 3jrp_A          102 -ASVNSVQWAPHEYGPLLLVASSDGKVSVVE  131 (379)
T ss_dssp             -SCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred             -cceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence             89999999998  99999999999999996

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.67  E-value=7.4e-16  Score=95.35  Aligned_cols=98  Identities=20%  Similarity=0.211  Sum_probs=74.9

Q ss_pred             CCceEEEEeCcc-Cceeeec-----ccCCCCCCCCeeEeeeCC-CCceEEEeeCCCCcEEEeeCCCccc----hheeccc
Q psy17135          5 PSSVIYIWTLLE-LQTYARN-----DCPELNSEPPACQTIPSS-NISLFDSRPGHDCSIRLWNLDNKTC----VQEITAH   73 (106)
Q Consensus         5 ~d~~i~iwd~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~v~iwd~~~~~~----~~~~~~~   73 (106)
                      .|++|++||+.+ ++.+..+     ....|...+.++.|+|.+ ..   +++++.|+.|++||+++++.    +..+..|
T Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  272 (447)
T 3dw8_B          196 DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT---FVYSSSKGTIRLCDMRASALCDRHSKLFEEP  272 (447)
T ss_dssp             CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE---EEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred             CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE---EEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence            699999999984 4333321     233355567789999987 55   89999999999999998876    5667666


Q ss_pred             cc--------cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RK--------KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~--------~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..        .+...|.+++|+|++.++++++. +.|++||
T Consensus       273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd  312 (447)
T 3dw8_B          273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD  312 (447)
T ss_dssp             -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred             CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence            51        00028999999999999999998 9999996

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.66  E-value=2.5e-16  Score=96.60  Aligned_cols=91  Identities=18%  Similarity=0.246  Sum_probs=76.2

Q ss_pred             eEEEEeCccC-ceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          8 VIYIWTLLEL-QTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         8 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .|++||++++ ..+..+.. .|...+..+.|+| .+..   +++++.|+.|++||+++++++..+..|.    ..+.+++
T Consensus       241 ~i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~---l~s~~~dg~v~~wd~~~~~~~~~~~~~~----~~v~~~~  312 (416)
T 2pm9_A          241 SILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHL---LLSSGRDNTVLLWNPESAEQLSQFPARG----NWCFKTK  312 (416)
T ss_dssp             CCCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSC---EEEEESSSEEEEECSSSCCEEEEEECSS----SCCCCEE
T ss_pred             eEEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCe---EEEEeCCCCEEEeeCCCCccceeecCCC----CceEEEE
Confidence            9999999986 33222220 2455677799999 5666   8999999999999999999999998888    8999999


Q ss_pred             EcCCC-CEEEEecCCCeEEEcC
Q psy17135         86 FHPSK-PFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~-~~~~s~~~d~~i~iwd  106 (106)
                      |+|++ .++++++.|+.|++||
T Consensus       313 ~s~~~~~~l~s~~~d~~i~iw~  334 (416)
T 2pm9_A          313 FAPEAPDLFACASFDNKIEVQT  334 (416)
T ss_dssp             ECTTCTTEEEECCSSSEEEEEE
T ss_pred             ECCCCCCEEEEEecCCcEEEEE
Confidence            99998 8999999999999996

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.66  E-value=4.8e-16  Score=92.79  Aligned_cols=99  Identities=17%  Similarity=0.192  Sum_probs=76.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC-ceEEEeeCCCCcEEEeeCCCc------------------
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI-SLFDSRPGHDCSIRLWNLDNK------------------   64 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~v~iwd~~~~------------------   64 (106)
                      ..|+.+.+|+...++.........|...+..+.|+|.+.. ..++++++.|+.|++||++++                  
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  268 (351)
T 3f3f_A          189 ALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDN  268 (351)
T ss_dssp             ETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------
T ss_pred             cCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCC
Confidence            3577888888877765334444445666778999998721 122799999999999999864                  


Q ss_pred             ----------------------------cchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         65 ----------------------------TCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        65 ----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                                  +.+..+.+|.    ..|.+++|+|++.+|++++.|+.|++||
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~s~~~~~l~s~~~dg~v~iw~  334 (351)
T 3f3f_A          269 SADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN----GEVWSVSWNLTGTILSSAGDDGKVRLWK  334 (351)
T ss_dssp             ----------------------CCSEEEEEEEEECTTS----SCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred             CcccccccccccccccceeeeecccccccEEEEEeccc----ccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence                                        3445556666    8999999999999999999999999996

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.66  E-value=1.8e-15  Score=90.64  Aligned_cols=97  Identities=22%  Similarity=0.310  Sum_probs=77.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.+++||+........ ....+...+..+.+.+...... +++++.|+.|++||+++++++..+.+|.    ..|.+
T Consensus       147 s~d~~~~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~-~~s~~~d~~i~i~d~~~~~~~~~~~~h~----~~v~~  220 (340)
T 4aow_A          147 SRDKTIKLWNTLGVCKYTV-QDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVKVWNLANCKLKTNHIGHT----GYLNT  220 (340)
T ss_dssp             ETTSCEEEECTTSCEEEEE-CSSSCSSCEEEEEECSCSSSCE-EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred             cCCCeEEEEEeCCCceEEE-EeccccCcccceEEccCCCCcE-EEEEcCCCEEEEEECCCCceeeEecCCC----CcEEE
Confidence            4689999999987655322 2222344455567776654432 5899999999999999999988898888    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.++++++.|+.|++||
T Consensus       221 ~~~s~~~~~l~s~s~Dg~i~iwd  243 (340)
T 4aow_A          221 VTVSPDGSLCASGGKDGQAMLWD  243 (340)
T ss_dssp             EEECTTSSEEEEEETTCEEEEEE
T ss_pred             EEECCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999996

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.66  E-value=5.1e-16  Score=93.97  Aligned_cols=96  Identities=16%  Similarity=0.247  Sum_probs=77.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC-------------CCCceEEEeeCCCCcEEEeeCCCcc----c
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS-------------SNISLFDSRPGHDCSIRLWNLDNKT----C   66 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~s~~~d~~v~iwd~~~~~----~   66 (106)
                      ..|+.|++||+.++..........+...+..+.|.|.             +..   +++++.|+.|++||++++.    .
T Consensus       122 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~  198 (379)
T 3jrp_A          122 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK---FVTGGADNLVKIWKYNSDAQTYVL  198 (379)
T ss_dssp             ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCE---EEEEETTSCEEEEEEETTTTEEEE
T ss_pred             cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCE---EEEEeCCCeEEEEEecCCCcceee
Confidence            5689999999998755444444445556777899984             444   8999999999999998764    3


Q ss_pred             hheeccccccCCCCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135         67 VQEITAHRKKFDESILDVAFHPS---KPFIASAGADGLAKVFV  106 (106)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~~~d~~i~iwd  106 (106)
                      ...+..|.    ..|.+++|+|+   +.++++++.|+.|++||
T Consensus       199 ~~~~~~h~----~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd  237 (379)
T 3jrp_A          199 ESTLEGHS----DWVRDVAWSPTVLLRSYLASVSQDRTCIIWT  237 (379)
T ss_dssp             EEEECCCS----SCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred             EEEEeccc----CcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence            34566677    89999999999   89999999999999996

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.66  E-value=9.8e-16  Score=95.49  Aligned_cols=92  Identities=15%  Similarity=0.233  Sum_probs=80.4

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+..+..  |...+..+.|.|.+..   +++++.|+.|++||+++++++..+.+|.    ..+.+
T Consensus       287 ~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~v~~  357 (464)
T 3v7d_B          287 SYDNTLIVWDVAQMKCLYILSG--HTDRIYSTIYDHERKR---CISASMDTTIRIWDLENGELMYTLQGHT----ALVGL  357 (464)
T ss_dssp             ETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEETTTTE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEEE
T ss_pred             eCCCeEEEEECCCCcEEEEecC--CCCCEEEEEEcCCCCE---EEEEeCCCcEEEEECCCCcEEEEEeCCC----CcEEE
Confidence            4689999999999998666544  4555777899998877   8999999999999999999999999888    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|+  +..+++++.|+.+++||
T Consensus       358 ~~~~--~~~l~s~s~dg~v~vwd  378 (464)
T 3v7d_B          358 LRLS--DKFLVSAAADGSIRGWD  378 (464)
T ss_dssp             EEEC--SSEEEEEETTSEEEEEE
T ss_pred             EEEc--CCEEEEEeCCCcEEEEE
Confidence            9997  57899999999999996

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.66  E-value=1.5e-15  Score=97.34  Aligned_cols=95  Identities=5%  Similarity=0.024  Sum_probs=72.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCC---CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-------hheeccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPEL---NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-------VQEITAH   73 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-------~~~~~~~   73 (106)
                      ..||.|++||.++  ++..+. ++.   ...+.++.|+|.+..   +++|+.||+|++||+.++..       +.++..+
T Consensus       104 s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~---LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~  177 (588)
T 2j04_A          104 SNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS---IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS  177 (588)
T ss_dssp             ETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC---EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS
T ss_pred             eCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE---EEEEcCCCEEEEEECCCCccccccceeeeeeecc
Confidence            5789999999654  433333 211   124667999999998   99999999999999998753       4555333


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...|...|.+++|+|++  +++++.|+++++||
T Consensus       178 ~~gh~~~V~sVawSPdg--Laass~D~tVrlWd  208 (588)
T 2j04_A          178 DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT  208 (588)
T ss_dssp             CTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred             cccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence            32233899999999999  88888999999997

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.65  E-value=1.8e-15  Score=91.24  Aligned_cols=93  Identities=15%  Similarity=0.197  Sum_probs=81.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--------------cEEEeeCCCccchhe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--------------SIRLWNLDNKTCVQE   69 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--------------~v~iwd~~~~~~~~~   69 (106)
                      ..|+.|++||+.+++.+..+..   ......+.|.|.+..   +++++.++              .+++||..+++.+..
T Consensus       237 ~~d~~i~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~  310 (369)
T 3zwl_B          237 SRDTNSFLVDVSTLQVLKKYET---DCPLNTAVITPLKEF---IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR  310 (369)
T ss_dssp             ETTSEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSE---EEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred             cCCceEEEEECCCCceeeeecC---CCCceeEEecCCCce---EEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence            4689999999999988666653   445677889998887   77887777              899999999999999


Q ss_pred             eccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +..|.    ..|.+++|+|++.++++++.|+.|++|+
T Consensus       311 ~~~~~----~~v~~~~~s~~~~~l~s~~~dg~v~iw~  343 (369)
T 3zwl_B          311 VQGHF----GPLNTVAISPQGTSYASGGEDGFIRLHH  343 (369)
T ss_dssp             EECCS----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             eeccc----CcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence            98888    8999999999999999999999999996

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.65  E-value=4.2e-16  Score=95.87  Aligned_cols=92  Identities=12%  Similarity=0.024  Sum_probs=74.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..|+.|++||+.+++.......   . .... ..+.+.+..   +++++.|+.|++||+.+++....+..|.    ..|.
T Consensus        75 ~~d~~v~i~d~~~~~~~~~~~~---~-~~~~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~h~----~~v~  143 (420)
T 3vl1_A           75 RLDGHDFLFNTIIRDGSKMLKR---A-DYTAVDTAKLQMRR---FILGTTEGDIKVLDSNFNLQREIDQAHV----SEIT  143 (420)
T ss_dssp             EETTEEEEEECCSEETTTTSCS---C-CEEEEEEECSSSCE---EEEEETTSCEEEECTTSCEEEEETTSSS----SCEE
T ss_pred             EcCCcEEEEEecccceeeEEec---C-CceEEEEEecCCCE---EEEEECCCCEEEEeCCCcceeeeccccc----CccE
Confidence            4589999999988776333222   2 2333 455666666   8999999999999999988887777888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++.++++++.|+.|++||
T Consensus       144 ~~~~~~~~~~l~s~s~d~~i~iwd  167 (420)
T 3vl1_A          144 KLKFFPSGEALISSSQDMQLKIWS  167 (420)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCeEEEEe
Confidence            999999999999999999999996

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.65  E-value=9.1e-16  Score=95.37  Aligned_cols=96  Identities=22%  Similarity=0.358  Sum_probs=78.2

Q ss_pred             cCCCceEEEEeCccCc---eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQ---TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~   78 (106)
                      ...|+.|++||++++.   .+..+.  .|...+..+.|+|.+...  +++++.|+.|++||+++ +.++..+..|.    
T Consensus       250 ~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i~~~p~~~~~--l~tg~~dg~v~vwd~~~~~~~~~~~~~h~----  321 (430)
T 2xyi_A          250 VADDQKLMIWDTRNNNTSKPSHTVD--AHTAEVNCLSFNPYSEFI--LATGSADKTVALWDLRNLKLKLHSFESHK----  321 (430)
T ss_dssp             EETTSEEEEEETTCSCSSSCSEEEE--CCSSCEEEEEECSSCTTE--EEEEETTSEEEEEETTCTTSCSEEEECCS----
T ss_pred             EeCCCeEEEEECCCCCCCcceeEee--cCCCCeEEEEeCCCCCCE--EEEEeCCCeEEEEeCCCCCCCeEEeecCC----
Confidence            3578999999999873   322332  345567789999988754  78999999999999998 56678888887    


Q ss_pred             CCeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|++. ++++++.|+.|++||
T Consensus       322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd  350 (430)
T 2xyi_A          322 DEIFQVQWSPHNETILASSGTDRRLHVWD  350 (430)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred             CCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence            8999999999885 699999999999996

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.65  E-value=5.3e-16  Score=93.35  Aligned_cols=94  Identities=17%  Similarity=0.199  Sum_probs=77.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCC---CCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSS---NISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDES   80 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~   80 (106)
                      .|+.|++||+.+++........ |...+.++.|+|..   ..   +++++.|+.|++||+.+++ ++..+..|.    ..
T Consensus        42 ~d~~v~iw~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~  113 (357)
T 3i2n_A           42 GTGVIQLYEIQHGDLKLLREIE-KAKPIKCGTFGATSLQQRY---LATGDFGGNLHIWNLEAPEMPVYSVKGHK----EI  113 (357)
T ss_dssp             CCEEEEEEEECSSSEEEEEEEE-ESSCEEEEECTTCCTTTCC---EEEEETTSCEEEECTTSCSSCSEEECCCS----SC
T ss_pred             CCcEEEEEeCCCCcccceeeec-ccCcEEEEEEcCCCCCCce---EEEecCCCeEEEEeCCCCCccEEEEEecc----cc
Confidence            4899999999998864443332 34557779999984   55   8999999999999999887 788888888    89


Q ss_pred             eEEEEE------cCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAF------HPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~------~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.++.|      +|++..+++++.|+.+++||
T Consensus       114 v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd  145 (357)
T 3i2n_A          114 INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWD  145 (357)
T ss_dssp             EEEEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred             eEEEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence            999954      68899999999999999997

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.65  E-value=3.3e-16  Score=95.96  Aligned_cols=95  Identities=12%  Similarity=0.061  Sum_probs=80.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-----------------
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-----------------   65 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-----------------   65 (106)
                      ...|+.|++||+.+++.+..+..  +...+..+.|+|.+..   +++++.|+.|++||+.+++                 
T Consensus       306 ~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~s~~~~~---l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~  380 (425)
T 1r5m_A          306 CSMDGSVRLWSLKQNTLLALSIV--DGVPIFAGRISQDGQK---YAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPL  380 (425)
T ss_dssp             EETTSEEEEEETTTTEEEEEEEC--TTCCEEEEEECTTSSE---EEEEETTSCEEEEECHHHHC--------------CE
T ss_pred             EeCCCcEEEEECCCCcEeEeccc--CCccEEEEEEcCCCCE---EEEEECCCeEEEEECCCCccceeeeecccccccCcc
Confidence            35689999999999988665554  3445677889998777   8999999999999999877                 


Q ss_pred             ---chheeccccccCCC--CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 ---CVQEITAHRKKFDE--SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 ---~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ++..+..|.    .  .|.+++|+|++.+|++++.|+.|++||
T Consensus       381 ~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~  422 (425)
T 1r5m_A          381 PIPLYASYQSSQ----DNDYIFDLSWNCAGNKISVAYSLQEGSVVA  422 (425)
T ss_dssp             ECCEEEEECCTT----CCCCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred             cchhhhhhcCcc----cCCceEEEEccCCCceEEEEecCceEEEEe
Confidence               777787776    4  999999999999999999999999996

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.65  E-value=1e-15  Score=93.42  Aligned_cols=93  Identities=13%  Similarity=0.300  Sum_probs=75.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC----ccchheeccccccCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN----KTCVQEITAHRKKFDE   79 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~   79 (106)
                      ..|+.|++||+ +++.+..+..  |...+..+.|+|.+...  +++++.|+.|++||+++    +.++..+ .|.    .
T Consensus       182 ~~d~~i~i~d~-~~~~~~~~~~--h~~~v~~~~~~~~~~~~--l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~----~  251 (383)
T 3ei3_B          182 DSTGRLLLLGL-DGHEIFKEKL--HKAKVTHAEFNPRCDWL--MATSSVDATVKLWDLRNIKDKNSYIAEM-PHE----K  251 (383)
T ss_dssp             ETTSEEEEEET-TSCEEEEEEC--SSSCEEEEEECSSCTTE--EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECS----S
T ss_pred             CCCCCEEEEEC-CCCEEEEecc--CCCcEEEEEECCCCCCE--EEEEeCCCEEEEEeCCCCCcccceEEEe-cCC----C
Confidence            46899999999 4666444443  45567789999988832  79999999999999987    4444444 466    8


Q ss_pred             CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+++|+| ++..+++++.|+.+++||
T Consensus       252 ~v~~~~~s~~~~~~l~~~~~d~~i~iwd  279 (383)
T 3ei3_B          252 PVNAAYFNPTDSTKLLTTDQRNEIRVYS  279 (383)
T ss_dssp             CEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred             ceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence            999999999 999999999999999996

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.65  E-value=1.2e-15  Score=104.21  Aligned_cols=97  Identities=22%  Similarity=0.386  Sum_probs=82.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+++.+..+..  |...+.++.|.|.+... ++++++.|+.|++||+.+++++..+.+|.    ..|.
T Consensus       675 ~~~d~~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~h~----~~v~  747 (1249)
T 3sfz_A          675 CSADKKVKIWDSATGKLVHTYDE--HSEQVNCCHFTNKSNHL-LLATGSNDFFLKLWDLNQKECRNTMFGHT----NSVN  747 (1249)
T ss_dssp             EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSCC-EEEEEETTSCEEEEETTSSSEEEEECCCS----SCEE
T ss_pred             EeCCCeEEEEECCCCceEEEEcC--CCCcEEEEEEecCCCce-EEEEEeCCCeEEEEECCCcchhheecCCC----CCEE
Confidence            35789999999999998666654  45556778888854432 26899999999999999999998998888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+++++.|+.|++||
T Consensus       748 ~~~~sp~~~~l~s~s~dg~v~vwd  771 (1249)
T 3sfz_A          748 HCRFSPDDELLASCSADGTLRLWD  771 (1249)
T ss_dssp             EEEECSSTTEEEEEESSSEEEEEE
T ss_pred             EEEEecCCCEEEEEECCCeEEEEe
Confidence            999999999999999999999996

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.64  E-value=2e-15  Score=92.15  Aligned_cols=97  Identities=21%  Similarity=0.305  Sum_probs=82.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|++||+.+++....+..   ......+.+.+.+....++++++.++.+++||+++++.+..+..|.    ..|.
T Consensus       118 ~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~v~  190 (408)
T 4a11_B          118 SSFDKTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR----QEIL  190 (408)
T ss_dssp             EETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC----SCEE
T ss_pred             EeCCCeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC----CcEE
Confidence            34689999999999988666553   3446678888877655558999999999999999999888888888    8999


Q ss_pred             EEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++. .+++++.|+.+++||
T Consensus       191 ~~~~~~~~~~ll~~~~~dg~i~i~d  215 (408)
T 4a11_B          191 AVSWSPRYDYILATASADSRVKLWD  215 (408)
T ss_dssp             EEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             EEEECCCCCcEEEEEcCCCcEEEEE
Confidence            999999988 589999999999996

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.64  E-value=1.3e-15  Score=93.25  Aligned_cols=93  Identities=16%  Similarity=0.094  Sum_probs=80.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+..+..  +...+..+.|.|.+ .   +++++.|+.+++||+++++.+..+..|.    ..+.+
T Consensus       266 ~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~i~~  335 (425)
T 1r5m_A          266 SDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-K---VISCSMDGSVRLWSLKQNTLLALSIVDG----VPIFA  335 (425)
T ss_dssp             ETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTT-E---EEEEETTSEEEEEETTTTEEEEEEECTT----CCEEE
T ss_pred             cCCCEEEEEECCCCccceEecC--CCccEEEEEECCCC-E---EEEEeCCCcEEEEECCCCcEeEecccCC----ccEEE
Confidence            4689999999999887555543  35556778899877 4   7999999999999999999888888887    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.++++++.|+.|++||
T Consensus       336 ~~~s~~~~~l~~~~~dg~i~i~~  358 (425)
T 1r5m_A          336 GRISQDGQKYAVAFMDGQVNVYD  358 (425)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEcCCCCEEEEEECCCeEEEEE
Confidence            99999999999999999999996

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.64  E-value=1.6e-15  Score=90.98  Aligned_cols=100  Identities=15%  Similarity=0.218  Sum_probs=77.0

Q ss_pred             CCCceEEEEeCcc-CceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCCCcEEEeeCCCc------cchheeccccc
Q psy17135          4 VPSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHDCSIRLWNLDNK------TCVQEITAHRK   75 (106)
Q Consensus         4 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d~~v~iwd~~~~------~~~~~~~~~~~   75 (106)
                      ..|+.|++||+.+ +..........+...+..+.|.| .+..   +++++.|+.+++|+++..      +....+..|..
T Consensus       167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~---l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T 1yfq_A          167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG---YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL  243 (342)
T ss_dssp             ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE---EEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred             eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE---EEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence            4688999999998 55422222222344566788998 7776   899999999999999876      66677777651


Q ss_pred             -----cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 -----KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 -----~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                           .+...+.+++|+|++.++++++.|+.|++||
T Consensus       244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd  279 (342)
T 1yfq_A          244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN  279 (342)
T ss_dssp             CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred             cccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence                 0113899999999999999999999999996

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.64  E-value=2.2e-15  Score=90.85  Aligned_cols=93  Identities=17%  Similarity=0.250  Sum_probs=80.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+..+..  |...+..+.|+|.+..   +++++.|+.|++||+.+++++..+. +.    ..+.+
T Consensus        51 ~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~-~~----~~v~~  120 (369)
T 3zwl_B           51 SKDSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKY---CVTGSADYSIKLWDVSNGQCVATWK-SP----VPVKR  120 (369)
T ss_dssp             ESSSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTTEEEEEETTTCCEEEEEE-CS----SCEEE
T ss_pred             eCCCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCE---EEEEeCCCeEEEEECCCCcEEEEee-cC----CCeEE
Confidence            4689999999999998665554  4556777999998777   8999999999999999998888777 55    78999


Q ss_pred             EEEcCCCCEEEEecCC-----CeEEEcC
Q psy17135         84 VAFHPSKPFIASAGAD-----GLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d-----~~i~iwd  106 (106)
                      ++|+|++..+++++.+     +.+++||
T Consensus       121 ~~~~~~~~~l~~~~~~~~~~~g~i~~~d  148 (369)
T 3zwl_B          121 VEFSPCGNYFLAILDNVMKNPGSINIYE  148 (369)
T ss_dssp             EEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred             EEEccCCCEEEEecCCccCCCCEEEEEE
Confidence            9999999999999998     9999996

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.64  E-value=8.4e-16  Score=92.49  Aligned_cols=93  Identities=12%  Similarity=0.185  Sum_probs=77.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee---CCCCceEEEeeCCCCcEEEeeCCCccchheec-----cccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP---SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-----AHRK   75 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~   75 (106)
                      ..|+.|++||+++++......   +...+..+.|.|   .+..   +++++.|+.|++||+++++....+.     .|. 
T Consensus       187 ~~d~~i~i~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-  259 (357)
T 3i2n_A          187 YDNGDIKLFDLRNMALRWETN---IKNGVCSLEFDRKDISMNK---LVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK-  259 (357)
T ss_dssp             ETTSEEEEEETTTTEEEEEEE---CSSCEEEEEESCSSSSCCE---EEEEESTTEEEEEEEEEEETTTEEEEEEEECCS-
T ss_pred             ccCCeEEEEECccCceeeecC---CCCceEEEEcCCCCCCCCE---EEEECCCCeEEEEeCcCCCcccceeeeccCCCc-
Confidence            468999999999988733322   244577789999   5555   8999999999999999888777665     676 


Q ss_pred             cCCCCeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                         ..+.+++|+|++. ++++++.|+.|++||
T Consensus       260 ---~~v~~~~~~~~~~~~l~~~~~dg~i~iwd  288 (357)
T 3i2n_A          260 ---STVWQVRHLPQNRELFLTAGGAGGLHLWK  288 (357)
T ss_dssp             ---SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred             ---CCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence               8999999999998 799999999999996

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.64  E-value=2e-15  Score=101.25  Aligned_cols=100  Identities=11%  Similarity=0.014  Sum_probs=77.8

Q ss_pred             CCCceEEEEeCccCceeee---------cccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135          4 VPSSVIYIWTLLELQTYAR---------NDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR   74 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~   74 (106)
                      ..||+|++||+.+++....         .....|...+.++.|+|.+...  +++++.|+.| +||+++++++..+..|.
T Consensus       117 s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~--l~~g~~dg~v-lWd~~~~~~~~~~~~~~  193 (902)
T 2oaj_A          117 LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT--VLISYEYVTL-TYSLVENEIKQSFIYEL  193 (902)
T ss_dssp             ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE--EEEECSSCEE-EEETTTTEEEEEECCCB
T ss_pred             cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE--EEEEeCCCcE-EEECCCCceEEEEeccc
Confidence            4689999999998875311         1223356678889999965332  7899999999 99999998877776551


Q ss_pred             --------------ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 --------------KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 --------------~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                                    ..|...|.+++|+|++.+|++++.|++|++||
T Consensus       194 ~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd  239 (902)
T 2oaj_A          194 PPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD  239 (902)
T ss_dssp             CTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             CCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence                          01126799999999999999999999999996

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.64  E-value=1.4e-15  Score=92.07  Aligned_cols=97  Identities=15%  Similarity=0.232  Sum_probs=78.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc---hhee-ccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC---VQEI-TAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~---~~~~-~~~~~~~~   78 (106)
                      ...|+.|++||+.+++.........+...+..+.|+|.+..   +++++.|+.+++||++.+..   ...+ ..|.    
T Consensus        70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~----  142 (372)
T 1k8k_C           70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK---FAVGSGSRVISICYFEQENDWWVCKHIKKPIR----  142 (372)
T ss_dssp             EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE---EEEEETTSSEEEEEEETTTTEEEEEEECTTCC----
T ss_pred             EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE---EEEEeCCCEEEEEEecCCCcceeeeeeecccC----
Confidence            34689999999998876555544445556777999998876   89999999999999988763   2233 3455    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.+++|+|++..+++++.|+.+++||
T Consensus       143 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d  170 (372)
T 1k8k_C          143 STVLSLDWHPNSVLLAAGSCDFKCRIFS  170 (372)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence            7999999999999999999999999996

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.64  E-value=1.2e-15  Score=104.20  Aligned_cols=95  Identities=12%  Similarity=0.167  Sum_probs=83.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...||+|++||+.+++.+..+..  |...+.++.|+|.+..   +++++.|+.|++||+.+++++..+..|.    ..|.
T Consensus       633 ~~~d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~---l~s~~~d~~v~vwd~~~~~~~~~~~~~~----~~v~  703 (1249)
T 3sfz_A          633 CGADKTLQVFKAETGEKLLDIKA--HEDEVLCCAFSSDDSY---IATCSADKKVKIWDSATGKLVHTYDEHS----EQVN  703 (1249)
T ss_dssp             EETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECCS----SCEE
T ss_pred             EeCCCeEEEEECCCCCEEEEecc--CCCCEEEEEEecCCCE---EEEEeCCCeEEEEECCCCceEEEEcCCC----CcEE
Confidence            35789999999999998666553  4566778999998877   8999999999999999999999999888    8999


Q ss_pred             EEEEcC--CCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHP--SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~--~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|  ++..+++++.|+.|++||
T Consensus       704 ~~~~~~~~~~~~l~sg~~d~~v~vwd  729 (1249)
T 3sfz_A          704 CCHFTNKSNHLLLATGSNDFFLKLWD  729 (1249)
T ss_dssp             EEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred             EEEEecCCCceEEEEEeCCCeEEEEE
Confidence            999999  556899999999999996

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.64  E-value=6.4e-16  Score=96.41  Aligned_cols=97  Identities=10%  Similarity=0.071  Sum_probs=80.4

Q ss_pred             cCCCceEEEEeCc--cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh----eecccccc
Q psy17135          3 KVPSSVIYIWTLL--ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ----EITAHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~----~~~~~~~~   76 (106)
                      ...|+.|++||+.  +++.+..+....+...+..+.|+|.+..   +++++.++.+++|++.++....    .+.+|.  
T Consensus       121 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~---l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~--  195 (450)
T 2vdu_B          121 ADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT---VIIADKFGDVYSIDINSIPEEKFTQEPILGHV--  195 (450)
T ss_dssp             EGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE---EEEEETTSEEEEEETTSCCCSSCCCCCSEECS--
T ss_pred             ECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE---EEEEeCCCcEEEEecCCcccccccceeeeccc--
Confidence            3468999999999  7877666554333455677999998877   8999999999999998876554    677777  


Q ss_pred             CCCCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPS---KPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~---~~~~~s~~~d~~i~iwd  106 (106)
                        ..|.+++|+|+   +.++++++.|+.|++||
T Consensus       196 --~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd  226 (450)
T 2vdu_B          196 --SMLTDVHLIKDSDGHQFIITSDRDEHIKISH  226 (450)
T ss_dssp             --SCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred             --CceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence              89999999999   99999999999999996

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.63  E-value=4e-15  Score=90.80  Aligned_cols=95  Identities=15%  Similarity=0.246  Sum_probs=76.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chhee------------
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEI------------   70 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~------------   70 (106)
                      ..|+.|++||+.+++.+..+..  |...+..+.|.|.+...  +++++.|+.|++||++++. ++..+            
T Consensus       163 ~~~~~v~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l--l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  238 (408)
T 4a11_B          163 TRGPKVQLCDLKSGSCSHILQG--HRQEILAVSWSPRYDYI--LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE  238 (408)
T ss_dssp             ESSSSEEEEESSSSCCCEEECC--CCSCEEEEEECSSCTTE--EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred             cCCCeEEEEeCCCcceeeeecC--CCCcEEEEEECCCCCcE--EEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence            4689999999999887555543  45567779999988753  6899999999999998765 33333            


Q ss_pred             ---ccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         71 ---TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        71 ---~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.    ..|.+++|+|++.++++++.|+.+++||
T Consensus       239 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~vwd  273 (408)
T 4a11_B          239 SANTAHN----GKVNGLCFTSDGLHLLTVGTDNRMRLWN  273 (408)
T ss_dssp             TSSCSCS----SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccccccc----CceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence               3344    7899999999999999999999999996

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.63  E-value=2.3e-15  Score=92.68  Aligned_cols=92  Identities=18%  Similarity=0.239  Sum_probs=76.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe--eCCCCcEEEeeCCCccchh--eeccccccCCCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR--PGHDCSIRLWNLDNKTCVQ--EITAHRKKFDES   80 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~~~   80 (106)
                      .|+.|++||+.+++.+..+..   ...+..+.|+|.+..   +++  |+.|+.|++||+.+++...  .+.+|.    ..
T Consensus       282 ~d~~i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~---l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~----~~  351 (401)
T 4aez_A          282 MDKQIHFWNAATGARVNTVDA---GSQVTSLIWSPHSKE---IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD----TR  351 (401)
T ss_dssp             TTCEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSE---EEEEECTTTCEEEEEEEETTEEEEEEEEECCS----SC
T ss_pred             CCCEEEEEECCCCCEEEEEeC---CCcEEEEEECCCCCe---EEEEeecCCCcEEEEecCCccceeEEEecCCC----CC
Confidence            599999999999998666643   345777999998887   566  6689999999999865443  355677    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++|+|++.++++++.|+.|++|+
T Consensus       352 v~~~~~s~dg~~l~s~~~dg~i~iw~  377 (401)
T 4aez_A          352 VLYSALSPDGRILSTAASDENLKFWR  377 (401)
T ss_dssp             CCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            99999999999999999999999996

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.63  E-value=2.1e-15  Score=91.23  Aligned_cols=94  Identities=15%  Similarity=0.155  Sum_probs=76.9

Q ss_pred             CCCceEEEEeCccCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee--ccccccCCC
Q psy17135          4 VPSSVIYIWTLLELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI--TAHRKKFDE   79 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~   79 (106)
                      ..|+.|++||+.+++  .+..+.  .|...+..+.|.|.+..   +++++.|+.|++||+.+++....+  ..|.    .
T Consensus        27 ~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~---l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----~   97 (372)
T 1k8k_C           27 PNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNR---IVTCGTDRNAYVWTLKGRTWKPTLVILRIN----R   97 (372)
T ss_dssp             CSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTE---EEEEETTSCEEEEEEETTEEEEEEECCCCS----S
T ss_pred             eCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCE---EEEEcCCCeEEEEECCCCeeeeeEEeecCC----C
Confidence            468999999999887  544443  34556777999998777   899999999999999887644333  4455    7


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.+++|+|++..+++++.|+.+++||
T Consensus        98 ~v~~~~~~~~~~~l~~~~~d~~v~i~d  124 (372)
T 1k8k_C           98 AARCVRWAPNEKKFAVGSGSRVISICY  124 (372)
T ss_dssp             CEEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred             ceeEEEECCCCCEEEEEeCCCEEEEEE
Confidence            999999999999999999999999996

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.63  E-value=1.3e-15  Score=100.38  Aligned_cols=97  Identities=15%  Similarity=0.165  Sum_probs=77.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC--CCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS--SNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~   78 (106)
                      ...||+|++||+.++..........|...+.++.|+|.  +..   +++++.||.|++||+.+++  .+..+..|.    
T Consensus        27 g~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~---l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~----   99 (753)
T 3jro_A           27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTI---LASCSYDGKVLIWKEENGRWSQIAVHAVHS----   99 (753)
T ss_dssp             EETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSE---EEEEETTSCEEEEEEETTEEEEEEEECCCS----
T ss_pred             EECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCE---EEEEeCCCeEEEEECCCCcccccccccCCC----
Confidence            35699999999984332223333335556777888887  555   8999999999999999886  566777777    


Q ss_pred             CCeEEEEEcCC--CCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPS--KPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~--~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|+  +..+++++.|+.|++||
T Consensus       100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd  129 (753)
T 3jro_A          100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVE  129 (753)
T ss_dssp             SCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred             CCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence            89999999998  99999999999999996

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.62  E-value=1.7e-15  Score=93.71  Aligned_cols=71  Identities=15%  Similarity=0.234  Sum_probs=58.8

Q ss_pred             CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchh-------eeccccccCCCCeEEEEEcCCC-CEEEEecC
Q psy17135         28 LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQ-------EITAHRKKFDESILDVAFHPSK-PFIASAGA   98 (106)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~   98 (106)
                      |...+..+.|+|.+..   ++++ .|+.|++||+++ ++.+.       .+..|.    ..|.+++|+|++ ..+++++.
T Consensus       176 h~~~v~~~~~~~~~~~---l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l~s~~~  247 (447)
T 3dw8_B          176 HTYHINSISINSDYET---YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELT----EVITAAEFHPNSCNTFVYSSS  247 (447)
T ss_dssp             CSSCCCEEEECTTSSE---EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCC----CCEEEEEECSSCTTEEEEEET
T ss_pred             CCcceEEEEEcCCCCE---EEEe-CCCeEEEEECCCCCceeeeeecccccccccC----cceEEEEECCCCCcEEEEEeC
Confidence            5566788999998776   7888 799999999984 44444       244566    899999999998 89999999


Q ss_pred             CCeEEEcC
Q psy17135         99 DGLAKVFV  106 (106)
Q Consensus        99 d~~i~iwd  106 (106)
                      |+.|++||
T Consensus       248 dg~i~iwd  255 (447)
T 3dw8_B          248 KGTIRLCD  255 (447)
T ss_dssp             TSCEEEEE
T ss_pred             CCeEEEEE
Confidence            99999996

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.62  E-value=8.5e-16  Score=94.65  Aligned_cols=100  Identities=15%  Similarity=0.108  Sum_probs=72.6

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc--------
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR--------   74 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~--------   74 (106)
                      ...|++|+|||+.++.+......  ++..+.++.|+|.+...  +++++.|++|++||+++++.......+.        
T Consensus       162 ~s~D~tv~~Wd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~--l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~  237 (393)
T 4gq1_A          162 VGDDCTLIIWRLTDEGPILAGYP--LSSPGISVQFRPSNPNQ--LIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL  237 (393)
T ss_dssp             EETTSEEEEEEEETTEEEEEEEE--CSSCEEEEEEETTEEEE--EEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred             EECCCeEEEEECCCCceeeeecC--CCCCcEEEEECCCCCce--EEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence            35799999999988877444433  35567789999987543  7999999999999999876533221110        


Q ss_pred             -------------ccCCCCeEEEEEc-CCCCEEEEecCCCeEEEcC
Q psy17135         75 -------------KKFDESILDVAFH-PSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 -------------~~~~~~v~~~~~~-~~~~~~~s~~~d~~i~iwd  106 (106)
                                   ..+...+.++.|+ |++..+++++.|+++++||
T Consensus       238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd  283 (393)
T 4gq1_A          238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN  283 (393)
T ss_dssp             EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred             ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence                         1123678888886 7999999999999999996

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.62  E-value=4.4e-15  Score=88.63  Aligned_cols=94  Identities=18%  Similarity=0.349  Sum_probs=75.4

Q ss_pred             CceEEEEeCccCceeeec---ccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccccCCCC
Q psy17135          6 SSVIYIWTLLELQTYARN---DCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRKKFDES   80 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~   80 (106)
                      |+.|++||+.+++.....   ....+...+..+.|+|.+..   +++++.|+.|++||+.+++  ....+..|.    ..
T Consensus        71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----~~  143 (337)
T 1gxr_A           71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT---LIVGGEASTLSIWDLAAPTPRIKAELTSSA----PA  143 (337)
T ss_dssp             BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE---EEEEESSSEEEEEECCCC--EEEEEEECSS----SC
T ss_pred             CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE---EEEEcCCCcEEEEECCCCCcceeeecccCC----Cc
Confidence            899999999876642222   22234555677899998776   8999999999999999876  455666676    78


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+++|+|++..+++++.|+.+++||
T Consensus       144 i~~~~~~~~~~~l~~~~~dg~v~~~d  169 (337)
T 1gxr_A          144 CYALAISPDSKVCFSCCSDGNIAVWD  169 (337)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEe
Confidence            99999999999999999999999996

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.62  E-value=2.6e-15  Score=93.01  Aligned_cols=100  Identities=11%  Similarity=0.171  Sum_probs=74.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCC------------------------CCCCCCeeEeeeCCCCceEEEeeCCCCcEEE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPE------------------------LNSEPPACQTIPSSNISLFDSRPGHDCSIRL   58 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~i   58 (106)
                      ...|++|++||+.+++.+..+....                        +...+..+.|. .+..   +++++.|+.|++
T Consensus       279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~---l~s~~~d~~i~~  354 (437)
T 3gre_A          279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI---LLTDEATSSIVM  354 (437)
T ss_dssp             ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE---EEEEGGGTEEEE
T ss_pred             EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE---EEecCCCCeEEE
Confidence            3578999999999988765554321                        22224445666 3433   899999999999


Q ss_pred             eeCCCccchheecccc---------------------------------ccCCCCeEEEEEcCC--CCEEEEecCCCeEE
Q psy17135         59 WNLDNKTCVQEITAHR---------------------------------KKFDESILDVAFHPS--KPFIASAGADGLAK  103 (106)
Q Consensus        59 wd~~~~~~~~~~~~~~---------------------------------~~~~~~v~~~~~~~~--~~~~~s~~~d~~i~  103 (106)
                      ||+.+++++..+..|.                                 ..|...|.+++|+++  +.++++|+.||.|+
T Consensus       355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~  434 (437)
T 3gre_A          355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIG  434 (437)
T ss_dssp             EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEE
T ss_pred             EECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEE
Confidence            9999998877776521                                 013389999999987  77999999999999


Q ss_pred             EcC
Q psy17135        104 VFV  106 (106)
Q Consensus       104 iwd  106 (106)
                      +|.
T Consensus       435 iw~  437 (437)
T 3gre_A          435 IFQ  437 (437)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            995

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.62  E-value=5.5e-15  Score=90.99  Aligned_cols=93  Identities=9%  Similarity=0.147  Sum_probs=79.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++........ +...+.++.|+|.+..   +++++.|+.|++||+.+++.+..+..|.    ..|.+
T Consensus       110 ~~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~v~~  181 (401)
T 4aez_A          110 ALERNVYVWNADSGSVSALAETD-ESTYVASVKWSHDGSF---LSVGLGNGLVDIYDVESQTKLRTMAGHQ----ARVGC  181 (401)
T ss_dssp             EETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECTTSSE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred             ECCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECCCCCE---EEEECCCCeEEEEECcCCeEEEEecCCC----CceEE
Confidence            46899999999999886655553 3455777999998777   8999999999999999999898998888    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+  +..+++++.|+.|++||
T Consensus       182 ~~~~--~~~l~~~~~dg~i~i~d  202 (401)
T 4aez_A          182 LSWN--RHVLSSGSRSGAIHHHD  202 (401)
T ss_dssp             EEEE--TTEEEEEETTSEEEEEE
T ss_pred             EEEC--CCEEEEEcCCCCEEEEe
Confidence            9995  57999999999999996

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.61  E-value=4.4e-15  Score=90.34  Aligned_cols=99  Identities=10%  Similarity=0.040  Sum_probs=70.6

Q ss_pred             CCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .|+.|++|++.. ++.+.....  |......+.|.+....+..+++++.|++|++||++++++++++.+|.. +...+.+
T Consensus       155 ~d~~V~~~~~s~dG~~~~s~~~--~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-~v~~v~~  231 (356)
T 2w18_A          155 SDQQVEVMTFAEDGGGKENQFL--MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-YQASVCH  231 (356)
T ss_dssp             TTCEEEEEEECTTSCEEEEEEE--CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----CCCEE
T ss_pred             CCCcEEEEEECCCCceeeeecc--CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-ceeeeEE
Confidence            589999999954 666554444  344566678888322222389999999999999999999999976531 0146778


Q ss_pred             EEEcCCCCEE------------EEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFI------------ASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~------------~s~~~d~~i~iwd  106 (106)
                      ++|+|++..+            ++|+.|+++++||
T Consensus       232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd  266 (356)
T 2w18_A          232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN  266 (356)
T ss_dssp             EEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred             EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence            8999999876            6688899999996

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.61  E-value=8.6e-16  Score=98.43  Aligned_cols=96  Identities=10%  Similarity=0.162  Sum_probs=72.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~   82 (106)
                      .|||.+..|++.+++....+...+ ...+..+.|+|.+..   +++++.||.|++||.+.  ++..+. |... ....+.
T Consensus        61 sPdg~~~~~~~~~~~~~~~~~~~~-~~~V~~vawSPdG~~---LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~  133 (588)
T 2j04_A           61 FPLEFENKLDFELAQQNGLLNSQP-VCYPRVCKPSPIDDW---MAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYH  133 (588)
T ss_dssp             ECCCCCCTTTTSCCCSSCSSTTSC-SCCEEEEEECSSSSC---EEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEE
T ss_pred             CCCCCcceEEEEeCCCceEeecCC-CCcEEEEEECCCCCE---EEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEE
Confidence            466677777777666433444333 556788999999999   89999999999999644  555555 4410 012699


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|||+++.|++|+.||+|++||
T Consensus       134 svafSPDG~~LAsgs~DGtVkIWd  157 (588)
T 2j04_A          134 CFEWNPIESSIVVGNEDGELQFFS  157 (588)
T ss_dssp             EEEECSSSSCEEEEETTSEEEEEE
T ss_pred             EEEEcCCCCEEEEEcCCCEEEEEE
Confidence            999999999999999999999996

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.60  E-value=1.7e-15  Score=99.80  Aligned_cols=97  Identities=15%  Similarity=0.241  Sum_probs=77.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeC-------------CCCceEEEeeCCCCcEEEeeCCCc----c
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPS-------------SNISLFDSRPGHDCSIRLWNLDNK----T   65 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~s~~~d~~v~iwd~~~~----~   65 (106)
                      ...||+|++||+.++..........+...+..+.|.|.             +..   +++++.|+.|++||++++    .
T Consensus       119 gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~---l~sgs~dg~I~iwd~~~~~~~~~  195 (753)
T 3jro_A          119 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK---FVTGGADNLVKIWKYNSDAQTYV  195 (753)
T ss_dssp             EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC---EEEEETTSCEEEEEEETTTTEEE
T ss_pred             EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE---EEEEECCCeEEEEeccCCcccce
Confidence            35789999999998754334444445556777889884             455   899999999999999876    3


Q ss_pred             chheeccccccCCCCeEEEEEcCC---CCEEEEecCCCeEEEcC
Q psy17135         66 CVQEITAHRKKFDESILDVAFHPS---KPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~~~d~~i~iwd  106 (106)
                      +...+..|.    ..|.+++|+|+   +..+++++.|+.|++||
T Consensus       196 ~~~~~~~h~----~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd  235 (753)
T 3jro_A          196 LESTLEGHS----DWVRDVAWSPTVLLRSYLASVSQDRTCIIWT  235 (753)
T ss_dssp             EEEEECCCS----SCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred             eeeeecCCC----CcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence            455666777    89999999999   89999999999999996

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.60  E-value=6.3e-15  Score=91.95  Aligned_cols=95  Identities=12%  Similarity=0.074  Sum_probs=76.8

Q ss_pred             CCCceEEEEeCccCceee--ecccCCCCCCCCeeEeeeC---CCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccC
Q psy17135          4 VPSSVIYIWTLLELQTYA--RNDCPELNSEPPACQTIPS---SNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKF   77 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~   77 (106)
                      ..|+.|++|++.+++...  ......|...+..+.|+|.   +..   +++++.|+.|++||+++++++.. +.+|.   
T Consensus       168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~---l~s~~~d~~i~vwd~~~~~~~~~~~~~h~---  241 (450)
T 2vdu_B          168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQF---IITSDRDEHIKISHYPQCFIVDKWLFGHK---  241 (450)
T ss_dssp             ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEE---EEEEETTSCEEEEEESCTTCEEEECCCCS---
T ss_pred             eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcE---EEEEcCCCcEEEEECCCCceeeeeecCCC---
Confidence            357899999998877532  1122224556777899998   555   89999999999999999887776 45777   


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ..|.+++|+ ++.++++++.|+.|++||
T Consensus       242 -~~v~~~~~s-d~~~l~s~~~d~~v~vwd  268 (450)
T 2vdu_B          242 -HFVSSICCG-KDYLLLSAGGDDKIFAWD  268 (450)
T ss_dssp             -SCEEEEEEC-STTEEEEEESSSEEEEEE
T ss_pred             -CceEEEEEC-CCCEEEEEeCCCeEEEEE
Confidence             899999999 999999999999999996

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.59  E-value=1.3e-15  Score=91.76  Aligned_cols=94  Identities=14%  Similarity=0.122  Sum_probs=74.4

Q ss_pred             cCCCceEEEEeCccCc---eeeecccCCC----------CCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe
Q psy17135          3 KVPSSVIYIWTLLELQ---TYARNDCPEL----------NSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE   69 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~---~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~   69 (106)
                      ...|+.|++||+....   .+..+..+..          ...+..+.|+|.+..   +++++.|+.|++||+++++++..
T Consensus       234 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~---l~s~~~dg~i~iwd~~~~~~~~~  310 (368)
T 3mmy_A          234 GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT---LATVGSDGRFSFWDKDARTKLKT  310 (368)
T ss_dssp             EETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC---EEEEETTSCEEEEETTTTEEEEE
T ss_pred             ecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE---EEEEccCCeEEEEECCCCcEEEE
Confidence            3568999999998763   3223332111          013667889998877   89999999999999999999999


Q ss_pred             eccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135         70 ITAHRKKFDESILDVAFHPSKPFIASAGADGLAK  103 (106)
Q Consensus        70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~  103 (106)
                      +..|.    ..|.+++|+|++.++++++.|+..+
T Consensus       311 ~~~~~----~~v~~~~~s~~g~~l~~~s~d~~~~  340 (368)
T 3mmy_A          311 SEQLD----QPISACCFNHNGNIFAYASSYDWSK  340 (368)
T ss_dssp             CCCCS----SCEEEEEECTTSSCEEEEECCCSTT
T ss_pred             ecCCC----CCceEEEECCCCCeEEEEecccccc
Confidence            98888    8999999999999999999887543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.59  E-value=1.7e-14  Score=89.64  Aligned_cols=96  Identities=22%  Similarity=0.251  Sum_probs=74.8

Q ss_pred             cCCCceEEEEeCcc----------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------
Q psy17135          3 KVPSSVIYIWTLLE----------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------   66 (106)
Q Consensus         3 ~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------   66 (106)
                      ...||.|++||+.+          .+.+..+.  .|...+..+.|+|.+...  +++++.|+.|++|++.++..      
T Consensus       147 ~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~--l~s~~~dg~i~vwd~~~~~~~~~~~~  222 (430)
T 2xyi_A          147 KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGY--LLSASDDHTICLWDINATPKEHRVID  222 (430)
T ss_dssp             ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTE--EEEECTTSCEEEEETTSCCBGGGEEE
T ss_pred             ECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCe--EEEEeCCCeEEEEeCCCCCCCCceec
Confidence            35689999999987          34433333  355667889999988732  89999999999999987432      


Q ss_pred             -hheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         67 -VQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        67 -~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                       ...+..|.    ..|.+++|+| ++..+++++.|+.|++||
T Consensus       223 ~~~~~~~h~----~~v~~v~~~p~~~~~l~s~~~dg~i~i~d  260 (430)
T 2xyi_A          223 AKNIFTGHT----AVVEDVAWHLLHESLFGSVADDQKLMIWD  260 (430)
T ss_dssp             CSEEECCCS----SCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred             cceeecCCC----CCEeeeEEeCCCCCEEEEEeCCCeEEEEE
Confidence             33455566    8999999999 778899999999999996

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.58  E-value=2e-14  Score=94.53  Aligned_cols=96  Identities=20%  Similarity=0.381  Sum_probs=80.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeee--CCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP--SSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ...|++|++||+.+++........ +...+..+.|.|  .+..   +++++.|+.|++||+.+++++..+..|.    ..
T Consensus       159 ~~~dg~v~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~  230 (814)
T 3mkq_A          159 GCLDRTVKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKPY---MITASDDLTIKIWDYQTKSCVATLEGHM----SN  230 (814)
T ss_dssp             EETTSEEEEEETTCSSCSEEEECC-CTTCCCEEEECCSTTCCE---EEEECTTSEEEEEETTTTEEEEEEECCS----SC
T ss_pred             EeCCCeEEEEECCCCcceeEEecC-CCCCEEEEEEEECCCCCE---EEEEeCCCEEEEEECCCCcEEEEEcCCC----CC
Confidence            356899999999888775444442 224577788988  5555   7999999999999999999888888887    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+++|+|++..+++++.|+.|++||
T Consensus       231 v~~~~~~~~~~~l~~~~~dg~v~vwd  256 (814)
T 3mkq_A          231 VSFAVFHPTLPIIISGSEDGTLKIWN  256 (814)
T ss_dssp             EEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999999996

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.58  E-value=2.6e-14  Score=85.68  Aligned_cols=93  Identities=13%  Similarity=0.059  Sum_probs=75.4

Q ss_pred             cCCCceEEEEeCccCc---eeeecccCCCCCCCCeeEeeeCCC-CceEEEeeCCCCcEEEeeC-CCccchheecc--ccc
Q psy17135          3 KVPSSVIYIWTLLELQ---TYARNDCPELNSEPPACQTIPSSN-ISLFDSRPGHDCSIRLWNL-DNKTCVQEITA--HRK   75 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~v~iwd~-~~~~~~~~~~~--~~~   75 (106)
                      ...|+.|++||+.+++   ......  .+...+.++.|.|.+. .   +++++.|+.|++||+ .+++. ..+..  |. 
T Consensus        29 ~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~---l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~-  101 (342)
T 1yfq_A           29 TSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQ---IYVGTVQGEILKVDLIGSPSF-QALTNNEAN-  101 (342)
T ss_dssp             EETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEE---EEEEETTSCEEEECSSSSSSE-EECBSCCCC-
T ss_pred             EcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcE---EEEEcCCCeEEEEEeccCCce-EeccccCCC-
Confidence            3578999999999877   112222  2455677799999877 6   899999999999999 77654 56666  76 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.+++|+| +..+++++.|+.+++||
T Consensus       102 ---~~v~~l~~~~-~~~l~s~~~d~~i~iwd  128 (342)
T 1yfq_A          102 ---LGICRICKYG-DDKLIAASWDGLIEVID  128 (342)
T ss_dssp             ---SCEEEEEEET-TTEEEEEETTSEEEEEC
T ss_pred             ---CceEEEEeCC-CCEEEEEcCCCeEEEEc
Confidence               8999999999 99999999999999997

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.58  E-value=1.3e-14  Score=90.20  Aligned_cols=91  Identities=15%  Similarity=0.277  Sum_probs=75.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...||+|++||+.+++....+..  |...+.++.|  .+..   +++|+.|+.|++||+.+++++..+..|.    ..|.
T Consensus       149 g~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~--~~~~---l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~v~  217 (435)
T 1p22_A          149 GLRDNTIKIWDKNTLECKRILTG--HTGSVLCLQY--DERV---IITGSSDSTVRVWDVNTGEMLNTLIHHC----EAVL  217 (435)
T ss_dssp             EESSSCEEEEESSSCCEEEEECC--CSSCEEEEEC--CSSE---EEEEETTSCEEEEESSSCCEEEEECCCC----SCEE
T ss_pred             EeCCCeEEEEeCCCCeEEEEEcC--CCCcEEEEEE--CCCE---EEEEcCCCeEEEEECCCCcEEEEEcCCC----CcEE
Confidence            35789999999999998665554  4444555655  3444   8999999999999999999999998888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|++  ..+++++.|+.|++||
T Consensus       218 ~l~~~~--~~l~s~s~dg~i~vwd  239 (435)
T 1p22_A          218 HLRFNN--GMMVTCSKDRSIAVWD  239 (435)
T ss_dssp             EEECCT--TEEEEEETTSCEEEEE
T ss_pred             EEEEcC--CEEEEeeCCCcEEEEe
Confidence            999974  5899999999999996

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.58  E-value=2e-14  Score=89.43  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=75.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-----ccccc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-----AHRKK   76 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~   76 (106)
                      ...||.|++||+.+++.+..+.... +...+.++.|.  +..   +++++.|+.|++||+.+++.+..+.     .+.  
T Consensus       335 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~--  407 (445)
T 2ovr_B          335 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF---VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG--  407 (445)
T ss_dssp             EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE---EEEEETTSEEEEEETTTCCEEEEEEECTTGGGT--
T ss_pred             EeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE---EEEEeCCCeEEEEECCCCceeeeeeccccCCCC--
Confidence            3468999999999998877666533 33344455553  333   8999999999999999998887772     344  


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCe----EEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGL----AKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~----i~iwd  106 (106)
                        ..|.+++|+|++..+++++.||+    +.+||
T Consensus       408 --~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d  439 (445)
T 2ovr_B          408 --GVVWRIRASNTKLVCAVGSRNGTEETKLLVLD  439 (445)
T ss_dssp             --CEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred             --ceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence              78999999999999999999997    88886

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.57  E-value=1.5e-14  Score=89.90  Aligned_cols=91  Identities=20%  Similarity=0.318  Sum_probs=75.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+++.+..+..  |...+.++.+  .+..   +++++.|+.|++||+++++++..+.+|.    ..+.
T Consensus       272 ~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~--~~~~---l~~g~~dg~i~iwd~~~~~~~~~~~~h~----~~v~  340 (435)
T 1p22_A          272 ASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQY--RDRL---VVSGSSDNTIRLWDIECGACLRVLEGHE----ELVR  340 (435)
T ss_dssp             EETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEE--ETTE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEE
T ss_pred             EeCCCeEEEEECCcCcEEEEEcC--CCCcEEEEEe--CCCE---EEEEeCCCeEEEEECCCCCEEEEEeCCc----CcEE
Confidence            35799999999999998666654  3444445555  2344   7999999999999999999999999888    8999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|  ++..+++|+.|+.|++||
T Consensus       341 ~~~~--~~~~l~sg~~dg~i~vwd  362 (435)
T 1p22_A          341 CIRF--DNKRIVSGAYDGKIKVWD  362 (435)
T ss_dssp             EEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EEEe--cCCEEEEEeCCCcEEEEE
Confidence            9988  688999999999999996

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.57  E-value=2.4e-14  Score=87.15  Aligned_cols=53  Identities=23%  Similarity=0.227  Sum_probs=46.5

Q ss_pred             eCCCCcEEEeeCCCcc----------------chheeccccccCCCCeEEEEEcCCCCEEEEecCCCe-EEEcC
Q psy17135         50 PGHDCSIRLWNLDNKT----------------CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL-AKVFV  106 (106)
Q Consensus        50 ~~~d~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~-i~iwd  106 (106)
                      ++.+|.|++||+.++.                ++..+.+|.    ..|.+++|+|++.++++|+.|++ |++||
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~----~~v~~~~~s~~g~~l~s~s~d~~~v~iwd  224 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT----NPIKMVRLNRKSDMVATCSQDGTIIRVFK  224 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCS----SCEEEEEECTTSSEEEEEETTCSEEEEEE
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC----CceEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence            7899999999998765                266778887    89999999999999999999998 99996

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.55  E-value=3.2e-14  Score=88.51  Aligned_cols=91  Identities=14%  Similarity=0.271  Sum_probs=74.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...||+|++||+.+++.+..+..  |...+.++.+.  +..   +++++.|+.|++||+.+++++..+..|.    ..|.
T Consensus       135 g~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~--~~~---l~s~~~dg~i~vwd~~~~~~~~~~~~h~----~~v~  203 (445)
T 2ovr_B          135 GSDDNTLKVWSAVTGKCLRTLVG--HTGGVWSSQMR--DNI---IISGSTDRTLKVWNAETGECIHTLYGHT----STVR  203 (445)
T ss_dssp             EETTSCEEEEETTTCCEEEECCC--CSSCEEEEEEE--TTE---EEEEETTSCEEEEETTTTEEEEEECCCS----SCEE
T ss_pred             EECCCcEEEEECCCCcEEEEEcC--CCCCEEEEEec--CCE---EEEEeCCCeEEEEECCcCcEEEEECCCC----CcEE
Confidence            35799999999999998665554  44455556665  333   7999999999999999999888888888    8899


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.++  +..+++++.|+.+++||
T Consensus       204 ~~~~~--~~~l~s~s~dg~i~~wd  225 (445)
T 2ovr_B          204 CMHLH--EKRVVSGSRDATLRVWD  225 (445)
T ss_dssp             EEEEE--TTEEEEEETTSEEEEEE
T ss_pred             EEEec--CCEEEEEeCCCEEEEEE
Confidence            99986  56799999999999996

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.55  E-value=2.4e-14  Score=87.59  Aligned_cols=71  Identities=8%  Similarity=0.039  Sum_probs=55.9

Q ss_pred             CCCCCeeEeeeCCCCceEEEeeCCCC----cEEEeeCCCccc----hheeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         29 NSEPPACQTIPSSNISLFDSRPGHDC----SIRLWNLDNKTC----VQEITAHRKKFDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~s~~~d~----~v~iwd~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                      ...+..+.|+|.+..   +++++.++    .++.|+......    ...+..|.    ..|.+++|+|++++|++|+.|+
T Consensus       219 ~~~v~~v~fspdg~~---l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~V~~~~~Spdg~~lasgs~D~  291 (365)
T 4h5i_A          219 NWSLSKINFIADDTV---LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF----KGITSMDVDMKGELAVLASNDN  291 (365)
T ss_dssp             TEEEEEEEEEETTEE---EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----SCEEEEEECTTSCEEEEEETTS
T ss_pred             CCCEEEEEEcCCCCE---EEEEecCCcceeEEeecccccceecceeeeeecCCC----CCeEeEEECCCCCceEEEcCCC
Confidence            333556788888877   78887776    578888876543    34455666    7999999999999999999999


Q ss_pred             eEEEcC
Q psy17135        101 LAKVFV  106 (106)
Q Consensus       101 ~i~iwd  106 (106)
                      +|++||
T Consensus       292 ~V~iwd  297 (365)
T 4h5i_A          292 SIALVK  297 (365)
T ss_dssp             CEEEEE
T ss_pred             EEEEEE
Confidence            999997

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.53  E-value=6.6e-14  Score=82.88  Aligned_cols=93  Identities=13%  Similarity=0.047  Sum_probs=75.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~   79 (106)
                      ...||.|++||+.+++....+..  +...+..+.|+|.+..   +++++.|+.+++|++...   +.+..+..|.    .
T Consensus        35 ~~~dg~v~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~----~  105 (313)
T 3odt_A           35 VSRDGTVRLWSKDDQWLGTVVYT--GQGFLNSVCYDSEKEL---LLFGGKDTMINGVPLFATSGEDPLYTLIGHQ----G  105 (313)
T ss_dssp             EETTSEEEEEEESSSEEEEEEEE--CSSCEEEEEEETTTTE---EEEEETTSCEEEEETTCCTTSCC-CEECCCS----S
T ss_pred             EEcCCcEEEEECCCCEEEEEeec--CCccEEEEEECCCCCE---EEEecCCCeEEEEEeeecCCCCcccchhhcc----c
Confidence            45799999999998887554443  3556777999998877   899999999999998764   4566777777    8


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+.++.|  ++..+++++.|+.+++||
T Consensus       106 ~i~~~~~--~~~~l~~~~~d~~i~~~d  130 (313)
T 3odt_A          106 NVCSLSF--QDGVVISGSWDKTAKVWK  130 (313)
T ss_dssp             CEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred             CEEEEEe--cCCEEEEEeCCCCEEEEc
Confidence            9999999  577999999999999996

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.49  E-value=2e-13  Score=83.41  Aligned_cols=94  Identities=15%  Similarity=0.129  Sum_probs=75.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|+.|++||+.+++.+..+..   +..+..+.|+|.+...  +++++.++.|++||+.+++.+..+..+     ..+.
T Consensus         8 ~~~d~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l--~~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~v~   77 (391)
T 1l0q_A            8 NSESDNISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKV--YVANAHSNDVSIIDTATNNVIATVPAG-----SSPQ   77 (391)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEE--EEEEGGGTEEEEEETTTTEEEEEEECS-----SSEE
T ss_pred             cCCCCEEEEEECCCCeEEEEeec---CCCcceEEECCCCCEE--EEECCCCCeEEEEECCCCeEEEEEECC-----CCcc
Confidence            45789999999999988665554   2346678899988763  478889999999999999887777644     4889


Q ss_pred             EEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                      +++|+|++..+ ++++.++.|++||
T Consensus        78 ~~~~spdg~~l~~~~~~~~~v~v~d  102 (391)
T 1l0q_A           78 GVAVSPDGKQVYVTNMASSTLSVID  102 (391)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ceEECCCCCEEEEEECCCCEEEEEE
Confidence            99999999976 5666779999996

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.45  E-value=1.2e-12  Score=79.88  Aligned_cols=93  Identities=13%  Similarity=0.125  Sum_probs=75.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|++|++||+.+++.+..+...  . .+..+.|+|.+...  +++++.++.|++||+.+++.+..+..+     ..+.+
T Consensus        51 ~~d~~i~v~d~~~~~~~~~~~~~--~-~v~~~~~spdg~~l--~~~~~~~~~v~v~d~~~~~~~~~~~~~-----~~~~~  120 (391)
T 1l0q_A           51 AHSNDVSIIDTATNNVIATVPAG--S-SPQGVAVSPDGKQV--YVTNMASSTLSVIDTTSNTVAGTVKTG-----KSPLG  120 (391)
T ss_dssp             GGGTEEEEEETTTTEEEEEEECS--S-SEEEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEEEEECS-----SSEEE
T ss_pred             CCCCeEEEEECCCCeEEEEEECC--C-CccceEECCCCCEE--EEEECCCCEEEEEECCCCeEEEEEeCC-----CCcce
Confidence            46899999999999886665542  2 56678899988763  467778899999999999887777644     47899


Q ss_pred             EEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                      ++|+|++..+ ++++.++.|++||
T Consensus       121 ~~~s~dg~~l~~~~~~~~~v~~~d  144 (391)
T 1l0q_A          121 LALSPDGKKLYVTNNGDKTVSVIN  144 (391)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEECCCCCEEEEEeCCCCEEEEEE
Confidence            9999999976 7888999999996

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.44  E-value=6.8e-13  Score=81.96  Aligned_cols=97  Identities=6%  Similarity=-0.035  Sum_probs=76.1

Q ss_pred             cCCCceEEEEeCccCceeeeccc---CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDC---PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      ...++.|++||+.+++.......   ..|...+..+.|.+.+..   +++++.|+.|++||+++++.+..+..+.    .
T Consensus       140 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~s~~~d~~v~~~d~~~~~~~~~~~~~~----~  212 (433)
T 3bws_A          140 LLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNEL---WVSQMQANAVHVFDLKTLAYKATVDLTG----K  212 (433)
T ss_dssp             BTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEE---EEEEGGGTEEEEEETTTCCEEEEEECSS----S
T ss_pred             eCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEE---EEEECCCCEEEEEECCCceEEEEEcCCC----C
Confidence            34678899999999887543222   123444556777666655   7999999999999999988888887777    7


Q ss_pred             CeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                      .+.+++|+|++..+ ++++.++.|++||
T Consensus       213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d  240 (433)
T 3bws_A          213 WSKILLYDPIRDLVYCSNWISEDISVID  240 (433)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence            89999999999877 5666899999996

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.37  E-value=7.9e-12  Score=77.21  Aligned_cols=92  Identities=12%  Similarity=0.096  Sum_probs=71.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---------------CCcEEEeeCCCccchh
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---------------DCSIRLWNLDNKTCVQ   68 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---------------d~~v~iwd~~~~~~~~   68 (106)
                      ..|+.|++||+.+++.+..+..   ...+..+.|.|.+..   +++++.               ||.|++||..+++.+.
T Consensus       322 ~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~---l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~  395 (433)
T 3bws_A          322 MCCSKIEVYDLKEKKVQKSIPV---FDKPNTIALSPDGKY---LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE  395 (433)
T ss_dssp             TTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSE---EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred             cCCCEEEEEECCCCcEEEEecC---CCCCCeEEEcCCCCE---EEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence            5789999999999887655542   334567888888776   444443               5799999999998877


Q ss_pred             eeccccccCCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         69 EITAHRKKFDESILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                      .+..+     ..+..++|+|++..+++++ .|+.+++|+
T Consensus       396 ~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~  429 (433)
T 3bws_A          396 FWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYR  429 (433)
T ss_dssp             EEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred             EecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence            77653     5789999999999988776 599999995

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.28  E-value=3e-11  Score=77.52  Aligned_cols=92  Identities=13%  Similarity=-0.005  Sum_probs=75.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeC--CCccchheeccccccCCCCe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNL--DNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ..|++|.+||..+++.+..+...  .. ...+.++|.+..   +++++.|+.|.+||+  .+++++..+.. .    ...
T Consensus       156 ~~d~~V~v~D~~t~~~~~~i~~g--~~-~~~v~~spdg~~---l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g----~~p  224 (543)
T 1nir_A          156 RDAGQIALVDGDSKKIVKVIDTG--YA-VHISRMSASGRY---LLVIGRDARIDMIDLWAKEPTKVAEIKI-G----IEA  224 (543)
T ss_dssp             GGGTEEEEEETTTCCEEEEEECS--TT-EEEEEECTTSCE---EEEEETTSEEEEEETTSSSCEEEEEEEC-C----SEE
T ss_pred             cCCCeEEEEECCCceEEEEEecC--cc-cceEEECCCCCE---EEEECCCCeEEEEECcCCCCcEEEEEec-C----CCc
Confidence            46899999999999987766642  22 456778998887   788888999999999  78888777763 3    578


Q ss_pred             EEEEEcC----CCCEEEEec-CCCeEEEcC
Q psy17135         82 LDVAFHP----SKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~----~~~~~~s~~-~d~~i~iwd  106 (106)
                      ..++|+|    +++++++++ .+++|.+||
T Consensus       225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D  254 (543)
T 1nir_A          225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMD  254 (543)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred             ceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence            9999999    999988887 489999986

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.24  E-value=1.7e-11  Score=76.71  Aligned_cols=87  Identities=9%  Similarity=-0.027  Sum_probs=62.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc---cCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK---KFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~---~~~~   79 (106)
                      ...||+|++||++++........  |...+.++.|+|.+..   +++|+.|+.|++||.+ ++....+..+..   .+..
T Consensus       168 ~s~Dg~v~iwD~~~~~~~~~~~~--~~~~v~~v~wspdg~~---lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~  241 (434)
T 2oit_A          168 CLADGSIAVLQVTETVKVCATLP--STVAVTSVCWSPKGKQ---LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPV  241 (434)
T ss_dssp             EETTSCEEEEEESSSEEEEEEEC--GGGCEEEEEECTTSSC---EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCE
T ss_pred             EECCCeEEEEEcCCCcceeeccC--CCCceeEEEEcCCCCE---EEEEcCCCcEEEEccC-CcccccccCCcccCCCCce
Confidence            35799999999998865333222  3445778999999887   8999999999999998 554444443321   0113


Q ss_pred             CeEEEEEcCCCCEEEE
Q psy17135         80 SILDVAFHPSKPFIAS   95 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s   95 (106)
                      .+.++.|++++.++++
T Consensus       242 ~v~~v~w~~~~~~l~~  257 (434)
T 2oit_A          242 RVLDVLWIGTYVFAIV  257 (434)
T ss_dssp             EEEEEEEEETTEEEEE
T ss_pred             eEEEEEEecCceEEEE
Confidence            7899999998877644

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.22  E-value=8.1e-11  Score=73.13  Aligned_cols=89  Identities=10%  Similarity=-0.008  Sum_probs=66.5

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC---cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC---SIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      +.|++||+..+.. ..+..  +...+..+.|+|.+..   +++++.++   .|++||+.+++.. .+..+.    ..+.+
T Consensus       159 ~~i~i~d~~g~~~-~~l~~--~~~~v~~~~~Spdg~~---la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~----~~~~~  227 (415)
T 2hqs_A          159 YELRVSDYDGYNQ-FVVHR--SPQPLMSPAWSPDGSK---LAYVTFESGRSALVIQTLANGAVR-QVASFP----RHNGA  227 (415)
T ss_dssp             EEEEEEETTSCSC-EEEEE--ESSCEEEEEECTTSSE---EEEEECTTSSCEEEEEETTTCCEE-EEECCS----SCEEE
T ss_pred             ceEEEEcCCCCCC-EEEeC--CCCcceeeEEcCCCCE---EEEEEecCCCcEEEEEECCCCcEE-EeecCC----CcccC
Confidence            7999999985443 23332  3445677999999887   77777764   8999999988764 455566    78999


Q ss_pred             EEEcCCCCEEE-EecCCCe--EEEcC
Q psy17135         84 VAFHPSKPFIA-SAGADGL--AKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~-s~~~d~~--i~iwd  106 (106)
                      ++|+|+++.++ +++.++.  |++||
T Consensus       228 ~~~spdg~~la~~~~~~g~~~i~~~d  253 (415)
T 2hqs_A          228 PAFSPDGSKLAFALSKTGSLNLYVMD  253 (415)
T ss_dssp             EEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             EEEcCCCCEEEEEEecCCCceEEEEE
Confidence            99999999876 7776665  77775

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.15  E-value=1.7e-10  Score=67.46  Aligned_cols=92  Identities=12%  Similarity=-0.012  Sum_probs=67.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~   82 (106)
                      ..|++|++||+.+++......   +...+..+.|+|.+..   +++++ ++.|.+||+.+ ++.......+..   ..+.
T Consensus        19 ~~~~~i~~~d~~~~~~~~~~~---~~~~v~~~~~spdg~~---l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~---~~~~   88 (297)
T 2ojh_A           19 SMRSSIEIFNIRTRKMRVVWQ---TPELFEAPNWSPDGKY---LLLNS-EGLLYRLSLAGDPSPEKVDTGFAT---ICNN   88 (297)
T ss_dssp             CCCEEEEEEETTTTEEEEEEE---ESSCCEEEEECTTSSE---EEEEE-TTEEEEEESSSCCSCEECCCTTCC---CBCS
T ss_pred             CcceeEEEEeCCCCceeeecc---CCcceEeeEECCCCCE---EEEEc-CCeEEEEeCCCCCCceEecccccc---cccc
Confidence            468999999999888643222   2445777999998887   66665 78999999998 776555544431   5778


Q ss_pred             EEEEcCCCCEEEEec--CCCeEEEc
Q psy17135         83 DVAFHPSKPFIASAG--ADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~--~d~~i~iw  105 (106)
                      +++|+|++..+++++  .++...+|
T Consensus        89 ~~~~spdg~~l~~~~~~~~~~~~l~  113 (297)
T 2ojh_A           89 DHGISPDGALYAISDKVEFGKSAIY  113 (297)
T ss_dssp             CCEECTTSSEEEEEECTTTSSCEEE
T ss_pred             ceEECCCCCEEEEEEeCCCCcceEE
Confidence            899999999998888  33455554

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.15  E-value=9.2e-10  Score=68.42  Aligned_cols=90  Identities=14%  Similarity=0.091  Sum_probs=64.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc--EEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS--IRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..|++||+.+++... +..  +......+.|+|.+...  +++++.++.  |.+||+.+++. ..+..+.    ..+..+
T Consensus       203 ~~i~~~d~~tg~~~~-l~~--~~~~~~~~~~spdg~~l--a~~~~~~g~~~i~~~d~~~~~~-~~l~~~~----~~~~~~  272 (415)
T 2hqs_A          203 SALVIQTLANGAVRQ-VAS--FPRHNGAPAFSPDGSKL--AFALSKTGSLNLYVMDLASGQI-RQVTDGR----SNNTEP  272 (415)
T ss_dssp             CEEEEEETTTCCEEE-EEC--CSSCEEEEEECTTSSEE--EEEECTTSSCEEEEEETTTCCE-EECCCCS----SCEEEE
T ss_pred             cEEEEEECCCCcEEE-eec--CCCcccCEEEcCCCCEE--EEEEecCCCceEEEEECCCCCE-EeCcCCC----Ccccce
Confidence            589999999988732 221  23345678999998873  236666554  88999988765 4566666    789999


Q ss_pred             EEcCCCCEEEEecC-CC--eEEEcC
Q psy17135         85 AFHPSKPFIASAGA-DG--LAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~-d~--~i~iwd  106 (106)
                      +|+|+++.++.++. ++  .+.+||
T Consensus       273 ~~spdg~~l~~~s~~~g~~~i~~~d  297 (415)
T 2hqs_A          273 TWFPDSQNLAFTSDQAGRPQVYKVN  297 (415)
T ss_dssp             EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             EECCCCCEEEEEECCCCCcEEEEEE
Confidence            99999998877665 45  455543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.14  E-value=2.5e-10  Score=68.47  Aligned_cols=101  Identities=13%  Similarity=0.083  Sum_probs=72.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc--cCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK--KFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~   80 (106)
                      ...+++|.+||+.+++.+..+.... ......+.+.|.+...  +++...++.|.+||+.+++.+..+.....  .....
T Consensus        17 ~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~~--~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~   93 (349)
T 1jmx_B           17 TNYPNNLHVVDVASDTVYKSCVMPD-KFGPGTAMMAPDNRTA--YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS   93 (349)
T ss_dssp             EETTTEEEEEETTTTEEEEEEECSS-CCSSCEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred             eCCCCeEEEEECCCCcEEEEEecCC-CCCCceeEECCCCCEE--EEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc
Confidence            3468999999999998866665431 1135678888887642  46777889999999998887666543220  00023


Q ss_pred             eEEEEEcCCCCEEEEecCC------------CeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGAD------------GLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d------------~~i~iwd  106 (106)
                      +..++|+|+++.+++++.+            +.+.+||
T Consensus        94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d  131 (349)
T 1jmx_B           94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFS  131 (349)
T ss_dssp             SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred             ccceEECCCCCEEEEEcccccccccccccCCCeEEEEE
Confidence            6788999999998888765            8888885

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.08  E-value=1.1e-09  Score=65.34  Aligned_cols=101  Identities=10%  Similarity=0.067  Sum_probs=71.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc-cCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK-KFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~v~   82 (106)
                      ..++.|.+||+.+++.+..+...........+.++|.+...  ++++..++.|.+||+.+++.+..+..... .+...+.
T Consensus         8 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l--~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~   85 (337)
T 1pby_B            8 ARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIA--YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF   85 (337)
T ss_dssp             ETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEE--EEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred             CCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEE--EEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence            46899999999999886666543211035668888887653  56777889999999999887766543210 0002567


Q ss_pred             EEEEcCCCCEEEEec------------CCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAG------------ADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~------------~d~~i~iwd  106 (106)
                      .++|+|++..+++++            .++.+.+||
T Consensus        86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d  121 (337)
T 1pby_B           86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD  121 (337)
T ss_dssp             CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred             ceEECCCCCEEEEEecccccccccccccCceEEEEE
Confidence            889999999887775            568898885

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.07  E-value=6.3e-10  Score=66.54  Aligned_cols=95  Identities=9%  Similarity=0.014  Sum_probs=69.5

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc-hheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC-VQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~v   81 (106)
                      ...++.|.+||+.+++........  .... .+.++|.+...  +++...++.|.+||..+++. ...+..+.    ...
T Consensus        16 ~~~~~~v~~~d~~~~~~~~~~~~~--~~~~-~~~~s~dg~~l--~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~   86 (331)
T 3u4y_A           16 EQHLRRISFFSTDTLEILNQITLG--YDFV-DTAITSDCSNV--VVTSDFCQTLVQIETQLEPPKVVAIQEGQ----SSM   86 (331)
T ss_dssp             EGGGTEEEEEETTTCCEEEEEECC--CCEE-EEEECSSSCEE--EEEESTTCEEEEEECSSSSCEEEEEEECS----SCC
T ss_pred             ecCCCeEEEEeCcccceeeeEEcc--CCcc-eEEEcCCCCEE--EEEeCCCCeEEEEECCCCceeEEecccCC----CCc
Confidence            456889999999999886665542  3233 78888888752  45566688999999998887 55565554    344


Q ss_pred             EEEEEcCCCCEEEEecCCC---eEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADG---LAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~---~i~iwd  106 (106)
                      .+++|+|++++++++..++   .+.+||
T Consensus        87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d  114 (331)
T 3u4y_A           87 ADVDITPDDQFAVTVTGLNHPFNMQSYS  114 (331)
T ss_dssp             CCEEECTTSSEEEECCCSSSSCEEEEEE
T ss_pred             cceEECCCCCEEEEecCCCCcccEEEEE
Confidence            4489999999988655553   899885

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.07  E-value=1.3e-09  Score=71.59  Aligned_cols=90  Identities=16%  Similarity=0.086  Sum_probs=67.0

Q ss_pred             eEEEEeCccCceeeecccCCCC----------------------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc
Q psy17135          8 VIYIWTLLELQTYARNDCPELN----------------------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT   65 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~   65 (106)
                      .|.+||+.+++...........                      ..+..+.|+|++..   +++++. +.|.+||+.++.
T Consensus        65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~---l~~~~~-~~i~~~d~~~~~  140 (741)
T 2ecf_A           65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR---LLFPLG-GELYLYDLKQEG  140 (741)
T ss_dssp             EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSE---EEEEET-TEEEEEESSSCS
T ss_pred             EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE---EEEEeC-CcEEEEECCCCC
Confidence            8999999998874444332111                      12566889999887   566665 899999998873


Q ss_pred             --chheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         66 --CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        66 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        ....+..+.    ..+..++|||+++.++.++ ++.|++||
T Consensus       141 ~~~~~~l~~~~----~~~~~~~~SPDG~~la~~~-~~~i~~~d  178 (741)
T 2ecf_A          141 KAAVRQLTHGE----GFATDAKLSPKGGFVSFIR-GRNLWVID  178 (741)
T ss_dssp             TTSCCBCCCSS----SCEEEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred             cceEEEcccCC----cccccccCCCCCCEEEEEe-CCcEEEEe
Confidence              355566666    6899999999999998887 45888885

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.05  E-value=6.8e-09  Score=62.36  Aligned_cols=97  Identities=5%  Similarity=-0.032  Sum_probs=71.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|.+||+.+++....+...  ......+.|.|.+..   ++.++.++.+.+||..+++.+..+......+...+..+
T Consensus       162 ~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~s~dg~~---l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  236 (353)
T 3vgz_A          162 KESVIWVVDGGNIKLKTAIQNT--GKMSTGLALDSEGKR---LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINI  236 (353)
T ss_dssp             SSCEEEEEETTTTEEEEEECCC--CTTCCCCEEETTTTE---EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEE
T ss_pred             CCceEEEEcCCCCceEEEecCC--CCccceEEECCCCCE---EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceE
Confidence            4788999999999886655521  223566888998887   67777899999999999987776654221112567889


Q ss_pred             EEcCCCCEEEEe-cCCCeEEEcC
Q psy17135         85 AFHPSKPFIASA-GADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~-~~d~~i~iwd  106 (106)
                      +|+|++..++.+ ..++.+.+||
T Consensus       237 ~~s~dg~~l~~~~~~~~~v~~~d  259 (353)
T 3vgz_A          237 SLDTARQRAFITDSKAAEVLVVD  259 (353)
T ss_dssp             EEETTTTEEEEEESSSSEEEEEE
T ss_pred             EECCCCCEEEEEeCCCCEEEEEE
Confidence            999999875554 4558898885

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.05  E-value=4.4e-10  Score=73.51  Aligned_cols=95  Identities=5%  Similarity=-0.043  Sum_probs=67.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCC---CCCeeEeeeCCCCceEEEeeCCC---------CcEEEeeCCCccchheec
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNS---EPPACQTIPSSNISLFDSRPGHD---------CSIRLWNLDNKTCVQEIT   71 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~d---------~~v~iwd~~~~~~~~~~~   71 (106)
                      ..|++|++||+.+++....+..  +..   .+..+.|+|++..   +++++.+         +.+.+||+.+++. ..+.
T Consensus        34 ~~dg~i~~~d~~~g~~~~~~~~--~~~~~~~v~~~~~SpDg~~---l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~  107 (723)
T 1xfd_A           34 EQKGTVRLWNVETNTSTVLIEG--KKIESLRAIRYEISPDREY---ALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD  107 (723)
T ss_dssp             CSSSCEEEBCGGGCCCEEEECT--TTTTTTTCSEEEECTTSSE---EEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC
T ss_pred             eCCCCEEEEECCCCcEEEEecc--ccccccccceEEECCCCCE---EEEEecCccceeecceeeEEEEECCCCce-Eecc
Confidence            4688999999999887444433  221   3677899999887   6666543         6788999998875 3333


Q ss_pred             cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ... .+...+..++|||+++.++.++. +.|++||
T Consensus       108 ~~~-~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~  140 (723)
T 1xfd_A          108 PPE-VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA  140 (723)
T ss_dssp             CTT-CCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred             CCc-cccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence            221 01145788999999999988875 7888885

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.04  E-value=1.3e-09  Score=64.99  Aligned_cols=88  Identities=9%  Similarity=0.043  Sum_probs=66.3

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH   87 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~   87 (106)
                      .|.+||+.+++.. ......+......+.|+|.+..   ++++  ++.|.+||+.+++.+..+...     ..+..++|+
T Consensus       220 ~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~---l~~~--~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s  288 (337)
T 1pby_B          220 GLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR---AFGA--YNVLESFDLEKNASIKRVPLP-----HSYYSVNVS  288 (337)
T ss_dssp             EEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE---EEEE--ESEEEEEETTTTEEEEEEECS-----SCCCEEEEC
T ss_pred             ceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE---EEEe--CCeEEEEECCCCcCcceecCC-----CceeeEEEC
Confidence            5899999998874 3222222333456888888776   5555  689999999998877666543     467889999


Q ss_pred             CCCCEEEEecCCCeEEEcC
Q psy17135         88 PSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        88 ~~~~~~~s~~~d~~i~iwd  106 (106)
                      |+++.+++++.++.+.+||
T Consensus       289 ~dg~~l~~~~~~~~i~v~d  307 (337)
T 1pby_B          289 TDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             TTSCEEEEESBSSEEEEEE
T ss_pred             CCCCEEEEEcCCCcEEEEE
Confidence            9999988889999999986

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.03  E-value=3.4e-09  Score=68.13  Aligned_cols=94  Identities=11%  Similarity=0.016  Sum_probs=70.4

Q ss_pred             CCCceEEEEeCcc-------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-------CCCcEEEeeCCCccch-h
Q psy17135          4 VPSSVIYIWTLLE-------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-------HDCSIRLWNLDNKTCV-Q   68 (106)
Q Consensus         4 ~~d~~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------~d~~v~iwd~~~~~~~-~   68 (106)
                      ..|++|.+||+.+       .+.+..+..+  ......+.++|.+..   |.+++       .+++|.+||+.+++.. .
T Consensus       390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~--g~~~~~v~~~pdg~~---l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~  464 (543)
T 1nir_A          390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQ--GGGSLFIKTHPKSSH---LYVDTTFNPDARISQSVAVFDLKNLDAKYQ  464 (543)
T ss_dssp             SSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCCE---EEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred             CCCceEEEEEeCCCCCchhcCeEEEEEEcC--CCCceEEEcCCCCCc---EEEecCCCCCcccCceEEEEECCCCCCCeE
Confidence            3579999999998       6766665552  334566888998888   67765       2679999999998766 3


Q ss_pred             ee--------ccccccCCCCeEEEEEcCCCCEEEEe-----cCCCeEEEcC
Q psy17135         69 EI--------TAHRKKFDESILDVAFHPSKPFIASA-----GADGLAKVFV  106 (106)
Q Consensus        69 ~~--------~~~~~~~~~~v~~~~~~~~~~~~~s~-----~~d~~i~iwd  106 (106)
                      .+        ..+.    ..+..+.|+|+|+.+..+     +.++.|.+||
T Consensus       465 ~~~v~~~~~~~~~~----~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D  511 (543)
T 1nir_A          465 VLPIAEWADLGEGA----KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD  511 (543)
T ss_dssp             EECHHHHHCCCSSC----CEEEEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred             EeechhhcccCCCC----CceEeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence            33        2233    689999999999987654     2479999987

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.02  E-value=8.2e-09  Score=62.02  Aligned_cols=96  Identities=7%  Similarity=0.013  Sum_probs=70.3

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC-----CCC
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF-----DES   80 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~-----~~~   80 (106)
                      ++.|.+||..+++.+..+...   .....+.+.|.+...  +++...++.|.+||..+++.+..+..+....     ...
T Consensus        68 ~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l--~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  142 (353)
T 3vgz_A           68 GGVVYRLDPVTLEVTQAIHND---LKPFGATINNTTQTL--WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQ  142 (353)
T ss_dssp             SEEEEEECTTTCCEEEEEEES---SCCCSEEEETTTTEE--EEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCE
T ss_pred             CccEEEEcCCCCeEEEEEecC---CCcceEEECCCCCEE--EEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCC
Confidence            789999999999886666542   235668888888753  5677778999999999998777776543100     012


Q ss_pred             eEEEEEcCCCCEEEEec--CCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAG--ADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~--~d~~i~iwd  106 (106)
                      +..+.|+|++..++.++  .++.|.+||
T Consensus       143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d  170 (353)
T 3vgz_A          143 PRELVADDATNTVYISGIGKESVIWVVD  170 (353)
T ss_dssp             EEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred             CceEEECCCCCEEEEEecCCCceEEEEc
Confidence            68899999998765554  578888885

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.01  E-value=2.2e-09  Score=64.14  Aligned_cols=94  Identities=12%  Similarity=0.066  Sum_probs=62.0

Q ss_pred             CCCceEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-CcEEEeeCC--Cccc--hheeccccccC
Q psy17135          4 VPSSVIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-CSIRLWNLD--NKTC--VQEITAHRKKF   77 (106)
Q Consensus         4 ~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~--~~~~--~~~~~~~~~~~   77 (106)
                      ..|+.|++||+. +++........ +......+.|+|.+..   +++++.+ +.+.+|++.  +++.  +..+.. .   
T Consensus        12 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~---l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~---   83 (343)
T 1ri6_A           12 PESQQIHVWNLNHEGALTLTQVVD-VPGQVQPMVVSPDKRY---LYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P---   83 (343)
T ss_dssp             GGGTEEEEEEECTTSCEEEEEEEE-CSSCCCCEEECTTSSE---EEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S---
T ss_pred             CCCCeEEEEEECCCCcEEEeeeEe-cCCCCceEEECCCCCE---EEEeecCCCeEEEEEecCCCCceeecccccc-C---
Confidence            468999999995 33321111111 2334667889998876   5555554 899999987  4442  233332 2   


Q ss_pred             CCCeEEEEEcCCCCEEEEe-cCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFIASA-GADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~-~~d~~i~iwd  106 (106)
                       ..+..++|+|++..++++ ..++.+.+||
T Consensus        84 -~~~~~~~~s~dg~~l~~~~~~~~~i~~~d  112 (343)
T 1ri6_A           84 -GSLTHISTDHQGQFVFVGSYNAGNVSVTR  112 (343)
T ss_dssp             -SCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             -CCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence             467889999999976555 4588899985

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.01  E-value=3.1e-09  Score=69.51  Aligned_cols=90  Identities=9%  Similarity=-0.045  Sum_probs=60.5

Q ss_pred             CCceEEEEeCccCceeeeccc-CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccC------
Q psy17135          5 PSSVIYIWTLLELQTYARNDC-PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKF------   77 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~------   77 (106)
                      .++.|.+||+.+++. ..+.. ..+...+..+.|+|++..   ++.++. +.|++||+.+++.......+....      
T Consensus        89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~---la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~  163 (723)
T 1xfd_A           89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQ---LIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLS  163 (723)
T ss_dssp             CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTC---EEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred             ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCE---EEEEEC-CeEEEEECCCCceEEEecCCCCCceECccc
Confidence            358899999998876 22222 222223567889999988   666664 789999999887654444333000      


Q ss_pred             --------CCCeEEEEEcCCCCEEEEecCC
Q psy17135         78 --------DESILDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        78 --------~~~v~~~~~~~~~~~~~s~~~d   99 (106)
                              ...+..++||||++.|+.++.+
T Consensus       164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~~  193 (723)
T 1xfd_A          164 DWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (723)
T ss_dssp             CHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             ceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence                    0123789999999999888754

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.99  E-value=3.3e-09  Score=68.15  Aligned_cols=88  Identities=9%  Similarity=-0.044  Sum_probs=66.1

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----CcEEEeeCCCccchheeccccccCCCCe
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----CSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ++.+.+||+.+++.......   ..  ....|+|++..   +++++.+    ..|++||+.+++. ..+..+.    ..+
T Consensus       131 ~~~~~l~d~~~g~~~~l~~~---~~--~~~~~spDG~~---la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~----~~~  197 (582)
T 3o4h_A          131 EDRVALYALDGGGLRELARL---PG--FGFVSDIRGDL---IAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGE----GSF  197 (582)
T ss_dssp             SSCEEEEEEETTEEEEEEEE---SS--CEEEEEEETTE---EEEEEEEETTEEEEEEEETTTCCC-EEECCSS----CEE
T ss_pred             CCCceEEEccCCcEEEeecC---CC--ceEEECCCCCE---EEEEEEcCCCCeEEEEEcCCCCCc-eEeecCC----Ccc
Confidence            34455999998876333222   11  67889999988   6766555    7799999988774 3666666    678


Q ss_pred             EEEEEcCCCCEEEEecCCC--eEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADG--LAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~--~i~iwd  106 (106)
                      ..++||||++.++++..++  .|++||
T Consensus       198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d  224 (582)
T 3o4h_A          198 SSASISPGMKVTAGLETAREARLVTVD  224 (582)
T ss_dssp             EEEEECTTSCEEEEEECSSCEEEEEEC
T ss_pred             ccceECCCCCEEEEccCCCeeEEEEEc
Confidence            9999999999999888888  788886

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=98.99  E-value=2e-09  Score=73.37  Aligned_cols=91  Identities=12%  Similarity=0.012  Sum_probs=69.6

Q ss_pred             CceEE-EEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          6 SSVIY-IWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ++.+. +||+.+++.. .+.  .+......+.|+|.+..   +++++.++.+++||+.+++.......|.    ..+..+
T Consensus       357 ~~~l~~~~d~~~~~~~-~l~--~~~~~~~~~~~SpDG~~---la~~~~~~~v~~~d~~tg~~~~~~~~~~----~~v~~~  426 (1045)
T 1k32_A          357 EGDFLGIYDYRTGKAE-KFE--ENLGNVFAMGVDRNGKF---AVVANDRFEIMTVDLETGKPTVIERSRE----AMITDF  426 (1045)
T ss_dssp             TEEEEEEEETTTCCEE-ECC--CCCCSEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECSS----SCCCCE
T ss_pred             CCceEEEEECCCCCce-Eec--CCccceeeeEECCCCCE---EEEECCCCeEEEEECCCCceEEeccCCC----CCccce
Confidence            44677 8898877652 222  23344566889998887   7888999999999999988766665676    788999


Q ss_pred             EEcCCCCEEEEecCCC----------eEEEcC
Q psy17135         85 AFHPSKPFIASAGADG----------LAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~----------~i~iwd  106 (106)
                      +|+|+++++++++.++          .+++||
T Consensus       427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d  458 (1045)
T 1k32_A          427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYD  458 (1045)
T ss_dssp             EECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred             EECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence            9999999988877643          888885

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=98.98  E-value=1.7e-09  Score=64.60  Aligned_cols=93  Identities=5%  Similarity=0.000  Sum_probs=63.1

Q ss_pred             CceEEEEeCc--cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC---ccchheeccccccCCCC
Q psy17135          6 SSVIYIWTLL--ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN---KTCVQEITAHRKKFDES   80 (106)
Q Consensus         6 d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~~~   80 (106)
                      ++.|.+|++.  +++.........+. ....+.|+|.+...  ++++..++.|.+||+.+   .+....+..+     ..
T Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l--~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----~~  130 (343)
T 1ri6_A           59 EFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFV--FVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-----DG  130 (343)
T ss_dssp             TTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEE--EEEETTTTEEEEEEEETTEEEEEEEEECCC-----TT
T ss_pred             CCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEE--EEEecCCCeEEEEECCCCccccccccccCC-----CC
Confidence            4899999997  55532222221122 56778899988762  35556688999999943   3334444333     46


Q ss_pred             eEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                      +..++|+|++..+++++ .++.+.+||
T Consensus       131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d  157 (343)
T 1ri6_A          131 CHSANISPDNRTLWVPALKQDRICLFT  157 (343)
T ss_dssp             BCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             ceEEEECCCCCEEEEecCCCCEEEEEE
Confidence            78899999998776666 889999985

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=98.97  E-value=8.7e-10  Score=72.23  Aligned_cols=93  Identities=11%  Similarity=0.096  Sum_probs=66.6

Q ss_pred             CCceEEEEeCccCceeeecccCCC-CCCCCeeEeeeCCCCceEEEeeCC---------CCcEEEeeCCCccchheecccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPEL-NSEPPACQTIPSSNISLFDSRPGH---------DCSIRLWNLDNKTCVQEITAHR   74 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~---------d~~v~iwd~~~~~~~~~~~~~~   74 (106)
                      .|++|++||+.+++.......... ...+....|+|++..   ++.++.         ++.+++||+.+++.+.... -.
T Consensus        34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~---la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~  109 (719)
T 1z68_A           34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQF---VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LP  109 (719)
T ss_dssp             TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSE---EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CC
T ss_pred             CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCe---EEEEecCceeEEeecceEEEEEECCCCcccccee-cC
Confidence            588999999999887443332100 012677899999887   565554         6899999999887631111 12


Q ss_pred             ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                          ..+..++|||||+.|+.+. ++.|++|+
T Consensus       110 ----~~~~~~~~SPDG~~la~~~-~~~i~~~~  136 (719)
T 1z68_A          110 ----RPIQYLCWSPVGSKLAYVY-QNNIYLKQ  136 (719)
T ss_dssp             ----SSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred             ----cccccceECCCCCEEEEEE-CCeEEEEe
Confidence                4678899999999998885 78999986

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=98.95  E-value=7.9e-09  Score=62.31  Aligned_cols=99  Identities=8%  Similarity=0.070  Sum_probs=63.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-CCCcEEEeeCCC-cc--chheeccccc-----
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-HDCSIRLWNLDN-KT--CVQEITAHRK-----   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~-~~--~~~~~~~~~~-----   75 (106)
                      .++.|.+||+.+++.........+......+.++|.+..   +++++ .++.+.+|++.. +.  .+..+.....     
T Consensus        61 ~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~---l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~  137 (347)
T 3hfq_A           61 DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQL---VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPE  137 (347)
T ss_dssp             TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTE---EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTT
T ss_pred             CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCE---EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCcc
Confidence            368999999977664222221112345667889998887   45544 789999999963 32  2222221110     


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .....+..++|+|+++.+++...++.+.+|+
T Consensus       138 ~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~  168 (347)
T 3hfq_A          138 QDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN  168 (347)
T ss_dssp             CSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred             ccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence            0013588899999999777777888999885

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=98.94  E-value=4.4e-09  Score=71.74  Aligned_cols=92  Identities=9%  Similarity=-0.050  Sum_probs=68.6

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----------CcEEEeeCCCccchheeccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----------CSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----------~~v~iwd~~~~~~~~~~~~~   73 (106)
                      ..++.|++||+.+++.......  +...+..+.|+|.+..   ++.++.+          +.+++||+.+++ ...+..+
T Consensus       397 ~~~~~v~~~d~~tg~~~~~~~~--~~~~v~~~~~SpDG~~---la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~  470 (1045)
T 1k32_A          397 NDRFEIMTVDLETGKPTVIERS--REAMITDFTISDNSRF---IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTE  470 (1045)
T ss_dssp             ETTSEEEEEETTTCCEEEEEEC--SSSCCCCEEECTTSCE---EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCS
T ss_pred             CCCCeEEEEECCCCceEEeccC--CCCCccceEECCCCCe---EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCC
Confidence            3567899999999887443322  3444577899999887   5555443          489999999877 5666666


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      .    ..+..++|+|+++.++.++.++....|
T Consensus       471 ~----~~~~~~~~spdG~~l~~~s~~~~~~~~  498 (1045)
T 1k32_A          471 N----SHDYAPAFDADSKNLYYLSYRSLDPSP  498 (1045)
T ss_dssp             S----SBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred             C----cccCCceEcCCCCEEEEEecccCCcCc
Confidence            6    678889999999998888876665555

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=98.93  E-value=2e-08  Score=59.97  Aligned_cols=92  Identities=7%  Similarity=-0.002  Sum_probs=65.4

Q ss_pred             CCCceEEEEeCccCce-eeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCC-C--cEEEeeCCCccchheeccccccCC
Q psy17135          4 VPSSVIYIWTLLELQT-YARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHD-C--SIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d-~--~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      ..++.|.+||+.+++. ......   ...... +.|+|.+..   +++...+ +  .|.+||+.+++.+..+..+     
T Consensus        59 ~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~---l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----  127 (331)
T 3u4y_A           59 DFCQTLVQIETQLEPPKVVAIQE---GQSSMADVDITPDDQF---AVTVTGLNHPFNMQSYSFLKNKFISTIPIP-----  127 (331)
T ss_dssp             STTCEEEEEECSSSSCEEEEEEE---CSSCCCCEEECTTSSE---EEECCCSSSSCEEEEEETTTTEEEEEEECC-----
T ss_pred             CCCCeEEEEECCCCceeEEeccc---CCCCccceEECCCCCE---EEEecCCCCcccEEEEECCCCCeEEEEECC-----
Confidence            3477999999998886 333333   223445 788898887   5655444 3  8999999998877766543     


Q ss_pred             CCeEEEEEcCCCCEE-EEecCCCe-EEEcC
Q psy17135         79 ESILDVAFHPSKPFI-ASAGADGL-AKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~-~s~~~d~~-i~iwd  106 (106)
                      .....++|+|+++.+ ++...++. +.+|+
T Consensus       128 ~~~~~~~~spdg~~l~~~~~~~~~~i~~~~  157 (331)
T 3u4y_A          128 YDAVGIAISPNGNGLILIDRSSANTVRRFK  157 (331)
T ss_dssp             TTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred             CCccceEECCCCCEEEEEecCCCceEEEEE
Confidence            467899999999854 55555577 88774

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.93  E-value=6.5e-10  Score=71.37  Aligned_cols=89  Identities=9%  Similarity=0.095  Sum_probs=67.7

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      +.|.+||+.+++.. .+.  .+........|+|++..   ++++..++  .|.+||+.+++.. .+..+.    ..+..+
T Consensus       175 ~~i~~~d~~~g~~~-~l~--~~~~~~~~~~~SpDG~~---l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~----~~~~~~  243 (582)
T 3o4h_A          175 VSLFTSNLSSGGLR-VFD--SGEGSFSSASISPGMKV---TAGLETAREARLVTVDPRDGSVE-DLELPS----KDFSSY  243 (582)
T ss_dssp             EEEEEEETTTCCCE-EEC--CSSCEEEEEEECTTSCE---EEEEECSSCEEEEEECTTTCCEE-ECCCSC----SHHHHH
T ss_pred             eEEEEEcCCCCCce-Eee--cCCCccccceECCCCCE---EEEccCCCeeEEEEEcCCCCcEE-EccCCC----cChhhh
Confidence            67999999988763 222  22334566899999888   67777788  8999999988766 555554    445555


Q ss_pred             E--------EcCCCCEEEEecCCCeEEEcC
Q psy17135         85 A--------FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~--------~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .        |+|++..+++++.++++++|+
T Consensus       244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~  273 (582)
T 3o4h_A          244 RPTAITWLGYLPDGRLAVVARREGRSAVFI  273 (582)
T ss_dssp             CCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred             hhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence            5        999998899999999999984

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=98.92  E-value=9.8e-09  Score=67.84  Aligned_cols=92  Identities=9%  Similarity=0.023  Sum_probs=65.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCC---CCCeeEeeeCCCCceEEEeeCCC---------CcEEEeeCCCccchheeccc
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNS---EPPACQTIPSSNISLFDSRPGHD---------CSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~d---------~~v~iwd~~~~~~~~~~~~~   73 (106)
                      |++|++||+.+++....+.......   ......|+|++..   ++.++.+         +.+.+||+.+++.. .+..+
T Consensus        35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~---l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~  110 (740)
T 4a5s_A           35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF---ILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERI  110 (740)
T ss_dssp             TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSE---EEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCC
T ss_pred             CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCE---EEEEECCeeeEEEccceEEEEEECCCCcEE-EcccC
Confidence            7899999999998754443322111   1122577898887   5665554         55679999988754 45556


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .    ..+...+|||||+.|+.+ .++.|++|+
T Consensus       111 ~----~~~~~~~~SPdG~~la~~-~~~~i~~~~  138 (740)
T 4a5s_A          111 P----NNTQWVTWSPVGHKLAYV-WNNDIYVKI  138 (740)
T ss_dssp             C----TTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred             C----CcceeeEECCCCCEEEEE-ECCeEEEEE
Confidence            6    689999999999999888 468888875

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=98.92  E-value=4e-09  Score=68.98  Aligned_cols=86  Identities=8%  Similarity=-0.018  Sum_probs=58.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-----ccchheecccccc---
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-----KTCVQEITAHRKK---   76 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-----~~~~~~~~~~~~~---   76 (106)
                      .++.|++||+.+++.......   ......+.|+|.+..   ++.+ .++.|.+||+.+     ++.......+...   
T Consensus        99 ~~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~SpdG~~---la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~  171 (706)
T 2z3z_A           99 TQGGLVGFDMLARKVTYLFDT---NEETASLDFSPVGDR---VAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY  171 (706)
T ss_dssp             ETTEEEEEETTTTEEEEEECC---TTCCTTCEECTTSSE---EEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred             ECCEEEEEECCCCceEEccCC---cccccCCcCCCCCCE---EEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence            358899999998876332222   334667889999887   5554 678999999988     7654433333200   


Q ss_pred             -------CCCCeEEEEEcCCCCEEEEec
Q psy17135         77 -------FDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        77 -------~~~~v~~~~~~~~~~~~~s~~   97 (106)
                             ....+..+.|+||++.|++++
T Consensus       172 g~~~~~ee~~~~~~~~~SpDg~~la~~~  199 (706)
T 2z3z_A          172 GQAVHQREFGIEKGTFWSPKGSCLAFYR  199 (706)
T ss_dssp             SSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred             ccchhhhhcCCCceEEECCCCCEEEEEE
Confidence                   001247899999999998887

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=98.86  E-value=3.5e-08  Score=57.57  Aligned_cols=92  Identities=9%  Similarity=0.025  Sum_probs=61.5

Q ss_pred             CCceEEEEeCcc-CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC--CCCcEEEeeC--CCccchheeccccccCCC
Q psy17135          5 PSSVIYIWTLLE-LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG--HDCSIRLWNL--DNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         5 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~v~iwd~--~~~~~~~~~~~~~~~~~~   79 (106)
                      .++.|.+||+.+ ++....... ++...+..+.|+|.+..   +++++  .++..++|.+  .+++ ...+..+     .
T Consensus        60 ~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-----~  129 (297)
T 2ojh_A           60 SEGLLYRLSLAGDPSPEKVDTG-FATICNNDHGISPDGAL---YAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-----L  129 (297)
T ss_dssp             ETTEEEEEESSSCCSCEECCCT-TCCCBCSCCEECTTSSE---EEEEECTTTSSCEEEEEETTCCC-CEECCSS-----S
T ss_pred             cCCeEEEEeCCCCCCceEeccc-cccccccceEECCCCCE---EEEEEeCCCCcceEEEEECCCCc-eEEeecC-----C
Confidence            367899999998 776333322 12234566889998887   56665  4455666654  4443 3444433     3


Q ss_pred             CeEEEEEcCCCCEEE-EecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIA-SAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~-s~~~d~~i~iwd  106 (106)
                      .+..++|+|++..++ +++.++.+++|+
T Consensus       130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~  157 (297)
T 2ojh_A          130 PSYWHGWSPDGKSFTYCGIRDQVFDIYS  157 (297)
T ss_dssp             SEEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred             CccceEECCCCCEEEEEECCCCceEEEE
Confidence            588899999999876 788889888874

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=98.85  E-value=1.3e-08  Score=66.78  Aligned_cols=84  Identities=15%  Similarity=0.078  Sum_probs=58.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCe--
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESI--   81 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v--   81 (106)
                      .++.|++||+.+++.+.....   ...+..+.|+|++..   ++.+. ++.|++|++.+++..... .++.    ..+  
T Consensus        88 ~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~---la~~~-~~~i~~~~~~~g~~~~l~~~~~~----~~v~~  156 (719)
T 1z68_A           88 YTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSK---LAYVY-QNNIYLKQRPGDPPFQITFNGRE----NKIFN  156 (719)
T ss_dssp             EEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTC---EEEEE-TTEEEEESSTTSCCEECCCCCBT----TTEEE
T ss_pred             cceEEEEEECCCCccccceec---CcccccceECCCCCE---EEEEE-CCeEEEEeCCCCCcEEEecCCCc----CCeEc
Confidence            368999999999886321222   123566899999998   56664 689999999887654322 1222    222  


Q ss_pred             ---------------EEEEEcCCCCEEEEecCC
Q psy17135         82 ---------------LDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        82 ---------------~~~~~~~~~~~~~s~~~d   99 (106)
                                     ..++||||++.|++++.|
T Consensus       157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d  189 (719)
T 1z68_A          157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN  189 (719)
T ss_dssp             SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred             ccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence                           479999999999988755

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=98.84  E-value=4.7e-08  Score=58.92  Aligned_cols=96  Identities=8%  Similarity=-0.021  Sum_probs=69.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee------CCCCceEEEeeCCCCcEEEeeCCCccchheec---ccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP------SSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT---AHR   74 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~---~~~   74 (106)
                      ..++.|++||..+++.+..+...........+.+.|      .+..   .++...+..+++|+..+++.+..+.   .+.
T Consensus       215 ~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~---~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~  291 (329)
T 3fvz_A          215 RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP---YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF  291 (329)
T ss_dssp             TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC---CTTCSCCCCEEEEETTTCCEEEEECCSSSCC
T ss_pred             CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE---EeccCCCcEEEEEEcCCCeEEEEEcCCCCcc
Confidence            356789999998888876665433333344466666      2322   2344556689999999998877763   333


Q ss_pred             ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                          .....++++|++.++++...+++|++|+
T Consensus       292 ----~~p~~ia~~~dG~lyvad~~~~~I~~~~  319 (329)
T 3fvz_A          292 ----DMPHDIVASEDGTVYIGDAHTNTVWKFT  319 (329)
T ss_dssp             ----SSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred             ----CCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence                6789999999998899999999999885

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=98.83  E-value=8.3e-09  Score=67.47  Aligned_cols=99  Identities=15%  Similarity=0.198  Sum_probs=66.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC-----cEEEeeCCCccchheecccc-ccCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC-----SIRLWNLDNKTCVQEITAHR-KKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-----~v~iwd~~~~~~~~~~~~~~-~~~~   78 (106)
                      .+..|.+||+.+++.........+...+..+.|+|.+..   +++++.++     .|.+||+.+++....+.... ....
T Consensus       233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~  309 (706)
T 2z3z_A          233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI---LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV  309 (706)
T ss_dssp             CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE---EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred             CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE---EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence            567899999998876333322223334566899998887   56655554     89999999884444433222 0000


Q ss_pred             CCeEEEEEcC--CCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHP--SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~--~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+..+.|+|  ++.++++++.++.+++|+
T Consensus       310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~  339 (706)
T 2z3z_A          310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYL  339 (706)
T ss_dssp             CCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred             CccCCceeecCCCCEEEEEEccCCccEEEE
Confidence            1235689999  999999999999888873

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.82  E-value=1.3e-08  Score=63.11  Aligned_cols=85  Identities=13%  Similarity=0.113  Sum_probs=60.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|++||+.+.........  +...+..+.+.+.  .   ++.+..||.+.+||+.++....    +.    ..|.++
T Consensus       104 ~~~~l~v~dv~sl~~~~~~~~--~~~~v~~i~~~~p--~---~av~~~dG~L~v~dl~~~~~~~----~~----~~Vs~v  168 (388)
T 1xip_A          104 TRNALYSLDLEELSEFRTVTS--FEKPVFQLKNVNN--T---LVILNSVNDLSALDLRTKSTKQ----LA----QNVTSF  168 (388)
T ss_dssp             ESSEEEEEESSSTTCEEEEEE--CSSCEEEEEECSS--E---EEEEETTSEEEEEETTTCCEEE----EE----ESEEEE
T ss_pred             cCCcEEEEEchhhhccCccce--eecceeeEEecCC--C---EEEEECCCCEEEEEccCCcccc----cc----CCceEE
Confidence            568999999987664332222  2223333444433  3   5788899999999999776532    34    689999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +|||.|  ++.+..||++++|+
T Consensus       169 ~WSpkG--~~vg~~dg~i~~~~  188 (388)
T 1xip_A          169 DVTNSQ--LAVLLKDRSFQSFA  188 (388)
T ss_dssp             EECSSE--EEEEETTSCEEEEE
T ss_pred             EEcCCc--eEEEEcCCcEEEEc
Confidence            999999  77888999998873

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=98.75  E-value=4.5e-08  Score=58.65  Aligned_cols=93  Identities=6%  Similarity=-0.041  Sum_probs=62.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCC----CCCCCeeEeeeCCCCceEEEeeCCC------------CcEEEeeCCCccch
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPEL----NSEPPACQTIPSSNISLFDSRPGHD------------CSIRLWNLDNKTCV   67 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~d------------~~v~iwd~~~~~~~   67 (106)
                      ..++.|.+||+.+++..........    ......+.|+|.+..   +++++.+            +.+.+||+.+++..
T Consensus        62 ~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~  138 (349)
T 1jmx_B           62 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE---VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA  138 (349)
T ss_dssp             TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE---EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred             CCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE---EEEEcccccccccccccCCCeEEEEECCCcccc
Confidence            3578999999999887655544211    112456788998877   5666544            89999999886543


Q ss_pred             heec--cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         68 QEIT--AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        68 ~~~~--~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.  .+.    ..+.+++|+|++. ++.++.  .+.+||
T Consensus       139 ~~~~~~~~~----~~~~~~~~s~dg~-l~~~~~--~i~~~d  172 (349)
T 1jmx_B          139 KPVRTFPMP----RQVYLMRAADDGS-LYVAGP--DIYKMD  172 (349)
T ss_dssp             CCSEEEECC----SSCCCEEECTTSC-EEEESS--SEEEEC
T ss_pred             ceeeeccCC----CcccceeECCCCc-EEEccC--cEEEEe
Confidence            3222  233    4678889999999 444443  377775

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=98.75  E-value=3.9e-08  Score=64.59  Aligned_cols=87  Identities=13%  Similarity=0.064  Sum_probs=57.5

Q ss_pred             ceEEEEeCccC---ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-------
Q psy17135          7 SVIYIWTLLEL---QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-------   76 (106)
Q Consensus         7 ~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-------   76 (106)
                      +.|.+||+.++   +. ..+..  +......+.|+|++..   ++.++ ++.|.+||+.+++.......+...       
T Consensus       129 ~~i~~~d~~~~~~~~~-~~l~~--~~~~~~~~~~SPDG~~---la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~  201 (741)
T 2ecf_A          129 GELYLYDLKQEGKAAV-RQLTH--GEGFATDAKLSPKGGF---VSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAE  201 (741)
T ss_dssp             TEEEEEESSSCSTTSC-CBCCC--SSSCEEEEEECTTSSE---EEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCC
T ss_pred             CcEEEEECCCCCcceE-EEccc--CCcccccccCCCCCCE---EEEEe-CCcEEEEecCCCCEEEeccCCccceeccccc
Confidence            67999999987   43 22222  2334566899999887   56665 468999999887654433322200       


Q ss_pred             -----CCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         77 -----FDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        77 -----~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                           ....+..++||||++.|+.++.|+
T Consensus       202 ~v~~~~~~~~~~~~~SpDg~~l~~~~~d~  230 (741)
T 2ecf_A          202 FVADEEMDRHTGYWWAPDDSAIAYARIDE  230 (741)
T ss_dssp             HHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred             eeeeeccccccceEECCCCCEEEEEEEcC
Confidence                 001247789999999998887654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=98.74  E-value=7.8e-08  Score=57.96  Aligned_cols=96  Identities=11%  Similarity=0.080  Sum_probs=61.5

Q ss_pred             CCCceEEEEeCcc--CceeeecccCCCC------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchheecc
Q psy17135          4 VPSSVIYIWTLLE--LQTYARNDCPELN------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQEITA   72 (106)
Q Consensus         4 ~~d~~i~iwd~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~~~~   72 (106)
                      ..++.|.+|++..  ++...........      .....+.|+|.+...  +++...++.|.+|++...   +.+..+..
T Consensus       206 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l--~v~~~~~~~v~v~~~~~~g~~~~~~~~~~  283 (347)
T 3hfq_A          206 ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL--YVSNRGYNTLAVFAVTADGHLTLIQQIST  283 (347)
T ss_dssp             TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE--EEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred             CCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEE--EEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence            4567889999874  4431111111001      124457888888762  366667899999998732   33444444


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEEecC-CCeEEEc
Q psy17135         73 HRKKFDESILDVAFHPSKPFIASAGA-DGLAKVF  105 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s~~~-d~~i~iw  105 (106)
                      +.    ..+..++|+|+++++++++. ++.+.+|
T Consensus       284 ~~----~~~~~~~~spdg~~l~v~~~~~~~v~v~  313 (347)
T 3hfq_A          284 EG----DFPRDFDLDPTEAFVVVVNQNTDNATLY  313 (347)
T ss_dssp             SS----SCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CC----CCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence            43    56789999999998776664 5889888

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=98.70  E-value=1.7e-07  Score=56.80  Aligned_cols=94  Identities=9%  Similarity=0.049  Sum_probs=61.2

Q ss_pred             CCceEEEEeCccCceeee--ccc-CCCCCCCCeeEeeeCCCCceEEEeeCC-CCcEEEeeCC--Ccc--chheecccccc
Q psy17135          5 PSSVIYIWTLLELQTYAR--NDC-PELNSEPPACQTIPSSNISLFDSRPGH-DCSIRLWNLD--NKT--CVQEITAHRKK   76 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~-d~~v~iwd~~--~~~--~~~~~~~~~~~   76 (106)
                      .++.|.+||+.+++....  ... ..+......+.|+|.+...  +++... ++.+.+|++.  +++  .+..+.. .  
T Consensus       231 ~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l--~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g--  305 (361)
T 3scy_A          231 IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYL--YASNRLKADGVAIFKVDETNGTLTKVGYQLT-G--  305 (361)
T ss_dssp             TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEE--EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S--
T ss_pred             CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEE--EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C--
Confidence            578899999987654221  211 1112233468889988762  244444 5889999986  344  2333333 2  


Q ss_pred             CCCCeEEEEEcCCCCEEEEec-CCCeEEEc
Q psy17135         77 FDESILDVAFHPSKPFIASAG-ADGLAKVF  105 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~-~d~~i~iw  105 (106)
                        ..+..++|+|+++++++++ .++.+.+|
T Consensus       306 --~~~~~~~~spdg~~l~~~~~~~~~v~v~  333 (361)
T 3scy_A          306 --IHPRNFIITPNGKYLLVACRDTNVIQIF  333 (361)
T ss_dssp             --SCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred             --CCCceEEECCCCCEEEEEECCCCCEEEE
Confidence              5678899999999877766 67888886

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=98.70  E-value=1.9e-07  Score=56.63  Aligned_cols=99  Identities=8%  Similarity=0.084  Sum_probs=61.6

Q ss_pred             CCCceEEEEeCccCce------e------eecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hhe
Q psy17135          4 VPSSVIYIWTLLELQT------Y------ARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQE   69 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~   69 (106)
                      ..++.|.+|++.....      +      ...... .......+.|+|.+...  +++...++.|.+|++.+++.  +..
T Consensus       174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~spdg~~l--~v~~~~~~~v~v~~~~~g~~~~~~~  250 (361)
T 3scy_A          174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA-PGSGPRHLIFNSDGKFA--YLINEIGGTVIAFRYADGMLDEIQT  250 (361)
T ss_dssp             TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC-TTCCEEEEEECTTSSEE--EEEETTTCEEEEEEEETTEEEEEEE
T ss_pred             CCCCEEEEEEEcCCCCcccccceeecccccceecC-CCCCCeEEEEcCCCCEE--EEEcCCCCeEEEEEecCCceEEeEE
Confidence            3567899998875431      1      111221 12335568899988762  34555789999999987653  222


Q ss_pred             eccccccCCCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135         70 ITAHRKKFDESILDVAFHPSKPFIASAGA--DGLAKVFV  106 (106)
Q Consensus        70 ~~~~~~~~~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd  106 (106)
                      +..... +......++|+|++++++.+..  ++.+.+|+
T Consensus       251 ~~~~~~-~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~  288 (361)
T 3scy_A          251 VAADTV-NAQGSGDIHLSPDGKYLYASNRLKADGVAIFK  288 (361)
T ss_dssp             EESCSS-CCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred             EecCCC-CCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence            222110 0145679999999998765554  48899885

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.66  E-value=3.2e-08  Score=60.57  Aligned_cols=96  Identities=11%  Similarity=0.001  Sum_probs=67.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~   73 (106)
                      +.|+.|.+||..+++.+..+...  . .. .+.++|.+..   +++++          .++.|.+||..+.+.+..+...
T Consensus        28 ~~d~~v~v~D~~t~~~~~~i~~g--~-~p-~i~~spdg~~---lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~  100 (361)
T 2oiz_A           28 LTESRVHVYDYTNGKFLGMVPTA--F-NG-HVQVSNDGKK---IYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLP  100 (361)
T ss_dssp             GGGCEEEEEETTTCCEEEEEECC--E-EE-EEEECTTSSE---EEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEEC
T ss_pred             cccCeEEEEECCCCeEEEEecCC--C-CC-ceEECCCCCE---EEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcC
Confidence            45789999999999886555442  2 23 7788888877   44443          3567999999988877777543


Q ss_pred             ccc--CCCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135         74 RKK--FDESILDVAFHPSKPFIASAGA--DGLAKVFV  106 (106)
Q Consensus        74 ~~~--~~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd  106 (106)
                      ...  .......++++|++++++++..  ++.|.+||
T Consensus       101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d  137 (361)
T 2oiz_A          101 PKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVD  137 (361)
T ss_dssp             TTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEE
T ss_pred             ccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEE
Confidence            210  0134567899999999887763  57888875

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=98.61  E-value=8.7e-07  Score=52.08  Aligned_cols=94  Identities=10%  Similarity=0.141  Sum_probs=61.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC-cEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC-SIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .++.|++||.. ++.+..+....+......+.+.+.+..   +++...++ .|.+|+. +++.+..+..+..  ...+..
T Consensus       183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l---~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~--~~~~~~  255 (286)
T 1q7f_A          183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEI---LIADNHNNFNLTIFTQ-DGQLISALESKVK--HAQCFD  255 (286)
T ss_dssp             GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCE---EEEECSSSCEEEEECT-TSCEEEEEEESSC--CSCEEE
T ss_pred             CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCE---EEEeCCCCEEEEEECC-CCCEEEEEcccCC--CCccee
Confidence            46788899874 444344433211123445667776644   56776665 9999996 4665666654431  134788


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++++|++.++++ +.+++|++|+
T Consensus       256 i~~~~~g~l~vs-~~~~~v~v~~  277 (286)
T 1q7f_A          256 VALMDDGSVVLA-SKDYRLYIYR  277 (286)
T ss_dssp             EEEETTTEEEEE-ETTTEEEEEE
T ss_pred             EEECCCCcEEEE-CCCCeEEEEE
Confidence            999999988777 4689999985

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.57  E-value=5.6e-07  Score=58.33  Aligned_cols=92  Identities=11%  Similarity=-0.031  Sum_probs=68.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--CccchheeccccccCCCCe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~v   81 (106)
                      ..+++|.++|..+++.+..+...   .....+.++|.+..   +++++.++.|.+||+.  +.+.+..+...     ...
T Consensus       174 ~~~~~V~viD~~t~~v~~~i~~g---~~p~~v~~SpDGr~---lyv~~~dg~V~viD~~~~t~~~v~~i~~G-----~~P  242 (567)
T 1qks_A          174 RDAGQIALIDGSTYEIKTVLDTG---YAVHISRLSASGRY---LFVIGRDGKVNMIDLWMKEPTTVAEIKIG-----SEA  242 (567)
T ss_dssp             TTTTEEEEEETTTCCEEEEEECS---SCEEEEEECTTSCE---EEEEETTSEEEEEETTSSSCCEEEEEECC-----SEE
T ss_pred             CCCCeEEEEECCCCeEEEEEeCC---CCccceEECCCCCE---EEEEcCCCeEEEEECCCCCCcEeEEEecC-----CCC
Confidence            46789999999999987666542   23446788888877   6677889999999996  66767666543     356


Q ss_pred             EEEEEc----CCCCEEEEec-CCCeEEEcC
Q psy17135         82 LDVAFH----PSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~----~~~~~~~s~~-~d~~i~iwd  106 (106)
                      ..++|+    |++++++.++ .++.+.++|
T Consensus       243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD  272 (567)
T 1qks_A          243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMD  272 (567)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred             ceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence            789999    6999876655 457777765

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.56  E-value=7.8e-07  Score=58.53  Aligned_cols=86  Identities=12%  Similarity=0.007  Sum_probs=57.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc-------------EEEeeCCCccch----h
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS-------------IRLWNLDNKTCV----Q   68 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~-------------v~iwd~~~~~~~----~   68 (106)
                      +.+|++||+.+++.+.....  .......+.|+|++..   |+.++.+..             |++|++.+++..    .
T Consensus       146 ~~~i~v~dl~tg~~~~~~~~--~~~~~~~~~wspDg~~---l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~  220 (695)
T 2bkl_A          146 EAVLHVIDVDSGEWSKVDVI--EGGKYATPKWTPDSKG---FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH  220 (695)
T ss_dssp             CCEEEEEETTTCCBCSSCCB--SCCTTCCCEECTTSSE---EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred             eEEEEEEECCCCCCcCCccc--CcccccceEEecCCCE---EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence            46899999999886311111  1222256889999887   566666554             999999887632    2


Q ss_pred             eeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         69 EITAHRKKFDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                      ....+.    ..+..+.|+|++++++.++.++
T Consensus       221 ~~~~~~----~~~~~~~~SpDG~~l~~~~~~~  248 (695)
T 2bkl_A          221 ERTGDP----TTFLQSDLSRDGKYLFVYILRG  248 (695)
T ss_dssp             CCCCCT----TCEEEEEECTTSCCEEEEEEET
T ss_pred             ecCCCC----EEEEEEEECCCCCEEEEEEeCC
Confidence            222233    5788999999999887766554

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.56  E-value=1.1e-06  Score=53.80  Aligned_cols=74  Identities=16%  Similarity=0.214  Sum_probs=59.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc--cchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK--TCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~v~~   83 (106)
                      +++|.+||+.+++.+..+...  .  ...+.++|.+..   +++++. +.|.+||..++  +.++.+....    .....
T Consensus       285 ~~~v~viD~~t~~~v~~i~~~--~--p~~ia~spdg~~---l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G----~~P~~  352 (361)
T 2oiz_A          285 AAEIWVMDTKTKQRVARIPGR--D--ALSMTIDQQRNL---MLTLDG-GNVNVYDISQPEPKLLRTIEGAA----EASLQ  352 (361)
T ss_dssp             CSEEEEEETTTTEEEEEEECT--T--CCEEEEETTTTE---EEEECS-SCEEEEECSSSSCEEEEEETTSC----SSEEE
T ss_pred             CceEEEEECCCCcEEEEEecC--C--eeEEEECCCCCE---EEEeCC-CeEEEEECCCCcceeeEEeccCC----CCcEE
Confidence            458999999999987777663  2  677899998886   566666 99999999999  8888875555    67788


Q ss_pred             EEEcCCCC
Q psy17135         84 VAFHPSKP   91 (106)
Q Consensus        84 ~~~~~~~~   91 (106)
                      +.++|+|.
T Consensus       353 ~~~~p~G~  360 (361)
T 2oiz_A          353 VQFHPVGG  360 (361)
T ss_dssp             EEECCCSC
T ss_pred             EEecCCCC
Confidence            99999875

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=98.56  E-value=1.2e-06  Score=53.40  Aligned_cols=96  Identities=10%  Similarity=-0.039  Sum_probs=62.4

Q ss_pred             CCceEEEEeCc-cCceeeecccC--CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCC-Cccch--heecc--cccc
Q psy17135          5 PSSVIYIWTLL-ELQTYARNDCP--ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLD-NKTCV--QEITA--HRKK   76 (106)
Q Consensus         5 ~d~~i~iwd~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~-~~~~~--~~~~~--~~~~   76 (106)
                      .++++.+|++. +++........  .+......+.|+|.+...  +++...++.|.+|++. +++..  ..+..  +.  
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l--~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g--  192 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL--YSADLTANKLWTHRKLASGEVELVGSVDAPDPG--  192 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE--EEEETTTTEEEEEEECTTSCEEEEEEEECSSTT--
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE--EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC--
Confidence            58899999997 45543222210  122345668899988762  2334446789999998 66542  22321  23  


Q ss_pred             CCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                        ..+..++|+|+++.+++++ .++.+.+|+
T Consensus       193 --~~p~~~~~spdg~~l~v~~~~~~~v~v~~  221 (365)
T 1jof_A          193 --DHPRWVAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             --CCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             --CCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence              5788999999999876665 467888873

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.50  E-value=3.6e-06  Score=49.83  Aligned_cols=92  Identities=8%  Similarity=-0.116  Sum_probs=68.3

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|.+||.++++.+..+..... .....+.+.|.+..   +++  .++.|..||. +++.+..+..+..   ..+..
T Consensus        12 ~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~i---lvs--~~~~V~~~d~-~G~~~W~~~~~~~---~~~~~   81 (276)
T 3no2_A           12 SGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEI---LFS--YSKGAKMITR-DGRELWNIAAPAG---CEMQT   81 (276)
T ss_dssp             TTCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCE---EEE--CBSEEEEECT-TSCEEEEEECCTT---CEEEE
T ss_pred             CCCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCE---EEe--CCCCEEEECC-CCCEEEEEcCCCC---ccccc
Confidence            5689999999999999777766321 24566777887765   563  4678999999 7888888876431   46788


Q ss_pred             EEEcCCCCEEEEecC-CCeEEEc
Q psy17135         84 VAFHPSKPFIASAGA-DGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~-d~~i~iw  105 (106)
                      +.+.+++..+++.+. ++.+..+
T Consensus        82 ~~~~~dG~~lv~~~~~~~~v~~v  104 (276)
T 3no2_A           82 ARILPDGNALVAWCGHPSTILEV  104 (276)
T ss_dssp             EEECTTSCEEEEEESTTEEEEEE
T ss_pred             cEECCCCCEEEEecCCCCEEEEE
Confidence            889999999888776 6666554

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=98.49  E-value=6e-06  Score=49.76  Aligned_cols=98  Identities=12%  Similarity=0.006  Sum_probs=66.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheecccc-----ccCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHR-----KKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~-----~~~~   78 (106)
                      +++.|.+||..+++.+...... +......+.+.+.+..   +++...++.|+.|+..... .+..+....     ..+.
T Consensus        67 ~~~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~d~~g~l---~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~  142 (329)
T 3fvz_A           67 EEDTILVIDPNNAEILQSSGKN-LFYLPHGLSIDTDGNY---WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHF  142 (329)
T ss_dssp             CSCCEEEECTTTCCEEEEECTT-TCSSEEEEEECTTSCE---EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred             cCCcEEEEECCCCeEEeccCCC-ccCCceEEEECCCCCE---EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence            4578999999988875444321 1223455777776664   6888888999999986442 444442100     0011


Q ss_pred             CCeEEEEEcC-CCCEEEEec-CCCeEEEcC
Q psy17135         79 ESILDVAFHP-SKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~-~~~~~~s~~-~d~~i~iwd  106 (106)
                      .....++++| ++.++++.+ .++.|++|+
T Consensus       143 ~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~  172 (329)
T 3fvz_A          143 CQPTDVAVEPSTGAVFVSDGYCNSRIVQFS  172 (329)
T ss_dssp             SSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred             CCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence            4688999999 888888886 689998885

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=98.46  E-value=8.2e-07  Score=54.15  Aligned_cols=93  Identities=10%  Similarity=0.112  Sum_probs=58.9

Q ss_pred             eEEEEeCc-cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-------------CCCcEEEeeCC-Cccchheecc
Q psy17135          8 VIYIWTLL-ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-------------HDCSIRLWNLD-NKTCVQEITA   72 (106)
Q Consensus         8 ~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------------~d~~v~iwd~~-~~~~~~~~~~   72 (106)
                      .|.+||+. +++......... ......+.++|.+... ++++++             .++.+.+|++. +++....+..
T Consensus        61 ~v~~~~~~~~g~~~~~~~~~~-~g~~~~~~~spdg~~l-~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~  138 (365)
T 1jof_A           61 KWSSFAVKSPTEIVHEASHPI-GGHPRANDADTNTRAI-FLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN  138 (365)
T ss_dssp             EEEEEEEEETTEEEEEEEEEC-CSSGGGGCTTSCCEEE-EEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE
T ss_pred             eEEEEEECCCCCEEEeeEeec-CCCCccEEECCCCCEE-EEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee
Confidence            78999997 676533222111 1123446677776631 134543             68899999997 4554433332


Q ss_pred             ----ccccCCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         73 ----HRKKFDESILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        73 ----~~~~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                          +.    ..+..++|+|+++.++++. .++.|++||
T Consensus       139 ~~~~~~----~~~~~~~~spdG~~l~~~~~~~~~v~~~~  173 (365)
T 1jof_A          139 YEYQEN----TGIHGMVFDPTETYLYSADLTANKLWTHR  173 (365)
T ss_dssp             EECCTT----CCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEeCCC----CcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence                22    6789999999999877654 467888885

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.45  E-value=1.3e-06  Score=56.79  Aligned_cols=90  Identities=9%  Similarity=0.074  Sum_probs=59.5

Q ss_pred             ceEEEEeCcc------CceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--------CcEEEeeCC-Ccc--chhe
Q psy17135          7 SVIYIWTLLE------LQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--------CSIRLWNLD-NKT--CVQE   69 (106)
Q Consensus         7 ~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--------~~v~iwd~~-~~~--~~~~   69 (106)
                      ..|.+||+.+      ++. ..+. ..+........|+|++..   ++..+.+        ..|.+||+. +++  ....
T Consensus       161 ~~i~~~~~~~~~~~~~~~~-~~l~-~~~~~~~~~~~~SpDG~~---la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~  235 (662)
T 3azo_A          161 RFLAAVPLDGSAAADRSAV-RELS-DDAHRFVTGPRLSPDGRQ---AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT  235 (662)
T ss_dssp             EEEEEEETTSTTTTCGGGS-EESS-CSCSSEECCCEECTTSSE---EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred             eEEEEEECCCCccccCCce-eEEE-ecCCCcccCceECCCCCE---EEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence            5899999987      554 2222 012233455789998887   5544433        479999998 561  2333


Q ss_pred             ec-cccccCCCCeEEEEEcCCCCEEEEecCCC--eEEEc
Q psy17135         70 IT-AHRKKFDESILDVAFHPSKPFIASAGADG--LAKVF  105 (106)
Q Consensus        70 ~~-~~~~~~~~~v~~~~~~~~~~~~~s~~~d~--~i~iw  105 (106)
                      +. .+.    ..+..+.|+|++++++++..++  .+.+|
T Consensus       236 l~~~~~----~~~~~~~~spdg~l~~~~~~~~~~~l~~~  270 (662)
T 3azo_A          236 LLGGPE----EAIAQAEWAPDGSLIVATDRTGWWNLHRV  270 (662)
T ss_dssp             EEEETT----BCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred             eCCCCC----ceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence            33 334    6789999999999888888888  44444

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.41  E-value=2.2e-06  Score=56.53  Aligned_cols=89  Identities=2%  Similarity=-0.194  Sum_probs=59.3

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCc----------------EEEeeCCCccchhee-
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCS----------------IRLWNLDNKTCVQEI-   70 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~----------------v~iwd~~~~~~~~~~-   70 (106)
                      +|++||+.+++.......   ......+.|+|++..   |+.++.++.                |.+|++.+++....+ 
T Consensus       152 ~i~v~d~~tg~~~~~~~~---~~~~~~~~wspDg~~---l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v  225 (710)
T 2xdw_A          152 TIKFMKVDGAKELPDVLE---RVKFSCMAWTHDGKG---MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC  225 (710)
T ss_dssp             EEEEEETTTTEEEEEEEE---EECSCCEEECTTSSE---EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE
T ss_pred             EEEEEECCCCCCCccccc---CcccceEEEEeCCCE---EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE
Confidence            899999999887443221   122456889998887   555555444                999999877632222 


Q ss_pred             -cc--ccccCCCCeEEEEEcCCCCEEEEecC-----CCeEEEcC
Q psy17135         71 -TA--HRKKFDESILDVAFHPSKPFIASAGA-----DGLAKVFV  106 (106)
Q Consensus        71 -~~--~~~~~~~~v~~~~~~~~~~~~~s~~~-----d~~i~iwd  106 (106)
                       ..  +.    ..+..+.|+|++++++.++.     +..+++||
T Consensus       226 ~~~~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d  265 (710)
T 2xdw_A          226 AEFPDEP----KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD  265 (710)
T ss_dssp             ECCTTCT----TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred             eccCCCC----eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence             21  23    45788999999998776654     45677664

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=98.39  E-value=9.1e-06  Score=47.71  Aligned_cols=95  Identities=8%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|.+||.. ++.+..+....+......+.+.+.+..   +++...++.|++|+.. ++.+..+..+..  ......+
T Consensus       140 ~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~-g~~~~~~~~~g~--~~~p~~i  212 (286)
T 1q7f_A          140 KVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEI---FISDNRAHCVKVFNYE-GQYLRQIGGEGI--TNYPIGV  212 (286)
T ss_dssp             TTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEE---EEEEGGGTEEEEEETT-CCEEEEESCTTT--SCSEEEE
T ss_pred             CCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCE---EEEECCCCEEEEEcCC-CCEEEEEccCCc--cCCCcEE
Confidence            46778888864 444334332212223445667776543   6777778999999974 444555533210  1467899


Q ss_pred             EEcCCCCEEEEecCCC-eEEEcC
Q psy17135         85 AFHPSKPFIASAGADG-LAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~-~i~iwd  106 (106)
                      ++++++.++++...++ .|.+||
T Consensus       213 ~~d~~G~l~v~~~~~~~~i~~~~  235 (286)
T 1q7f_A          213 GINSNGEILIADNHNNFNLTIFT  235 (286)
T ss_dssp             EECTTCCEEEEECSSSCEEEEEC
T ss_pred             EECCCCCEEEEeCCCCEEEEEEC
Confidence            9999999988888876 999886

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.35  E-value=9.5e-07  Score=53.82  Aligned_cols=94  Identities=9%  Similarity=-0.079  Sum_probs=61.7

Q ss_pred             CceEEEEeCccCceeeecccCCCC---CCCCeeEeeeCCCCceEEEeeCC-CCc--EEEeeCCCccchheeccccccCCC
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELN---SEPPACQTIPSSNISLFDSRPGH-DCS--IRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      +......|..++..+..+......   .......|+|.+..   ++..+. ++.  +.+||+.+++.......+.    .
T Consensus         9 ~~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~---l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~----~   81 (388)
T 3pe7_A            9 LTFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSK---LLFGGAFDGPWNYYLLDLNTQVATQLTEGRG----D   81 (388)
T ss_dssp             CCCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCE---EEEEECTTSSCEEEEEETTTCEEEECCCSSC----B
T ss_pred             ccceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCE---EEEEEcCCCCceEEEEeCCCCceEEeeeCCC----C
Confidence            344556777888776665542211   11222678898887   455544 563  7788988887655444444    3


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .+....|+|+++.|+.++.++.+++||
T Consensus        82 ~~~~~~~spdg~~l~~~~~~~~l~~~d  108 (388)
T 3pe7_A           82 NTFGGFLSPDDDALFYVKDGRNLMRVD  108 (388)
T ss_dssp             CSSSCEECTTSSEEEEEETTTEEEEEE
T ss_pred             CccceEEcCCCCEEEEEeCCCeEEEEE
Confidence            444668999999999999888888875

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=98.34  E-value=1.6e-06  Score=57.49  Aligned_cols=82  Identities=15%  Similarity=0.103  Sum_probs=55.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee-ccccccCCCCe----
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI-TAHRKKFDESI----   81 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~v----   81 (106)
                      +.+.+||+.+++... +.  .+........|+|++..   ++.+ .++.|.+|++.++...+.. .++.    ..+    
T Consensus        92 ~~~~~~d~~~~~~~~-l~--~~~~~~~~~~~SPdG~~---la~~-~~~~i~~~~~~~~~~~~lt~~g~~----~~~~~g~  160 (740)
T 4a5s_A           92 ASYDIYDLNKRQLIT-EE--RIPNNTQWVTWSPVGHK---LAYV-WNNDIYVKIEPNLPSYRITWTGKE----DIIYNGI  160 (740)
T ss_dssp             EEEEEEETTTTEECC-SS--CCCTTEEEEEECSSTTC---EEEE-ETTEEEEESSTTSCCEECCSCCBT----TTEEESB
T ss_pred             eEEEEEECCCCcEEE-cc--cCCCcceeeEECCCCCE---EEEE-ECCeEEEEECCCCceEEEcCCCCc----cceecCc
Confidence            667899999988632 22  22334567899999998   5555 4688999999887643321 1221    122    


Q ss_pred             -------------EEEEEcCCCCEEEEecCC
Q psy17135         82 -------------LDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        82 -------------~~~~~~~~~~~~~s~~~d   99 (106)
                                   ..+.|||||+.|+..+.|
T Consensus       161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d  191 (740)
T 4a5s_A          161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFN  191 (740)
T ss_dssp             CCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             ccccccchhcCCCcceEECCCCCEEEEEEEc
Confidence                         348899999998887644

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.25  E-value=1.7e-05  Score=47.91  Aligned_cols=91  Identities=5%  Similarity=-0.125  Sum_probs=61.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----------CcEEEeeCCCccchheecccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----------CSIRLWNLDNKTCVQEITAHR   74 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----------~~v~iwd~~~~~~~~~~~~~~   74 (106)
                      .++.|.++|+.+++.+......   .....+.+.|.+..   ++++..+          +.|.++|..+++....+....
T Consensus       150 ~~~~v~viD~~t~~~~~~i~~g---~~p~~i~~~~dG~l---~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~  223 (328)
T 3dsm_A          150 YQNRILKIDTETDKVVDELTIG---IQPTSLVMDKYNKM---WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL  223 (328)
T ss_dssp             TCCEEEEEETTTTEEEEEEECS---SCBCCCEECTTSEE---EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred             CCCEEEEEECCCCeEEEEEEcC---CCccceEEcCCCCE---EEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence            3788999999998876655442   22345666665543   4555443          789999999888776665432


Q ss_pred             ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         75 KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        75 ~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .   .....++++|++..+..+..  .+.+||
T Consensus       224 g---~~p~~la~~~d~~~lyv~~~--~v~~~d  250 (328)
T 3dsm_A          224 G---DWPSEVQLNGTRDTLYWINN--DIWRMP  250 (328)
T ss_dssp             T---CCCEEEEECTTSCEEEEESS--SEEEEE
T ss_pred             C---CCceeEEEecCCCEEEEEcc--EEEEEE
Confidence            1   46789999998888766654  666654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.23  E-value=3.9e-05  Score=44.47  Aligned_cols=92  Identities=5%  Similarity=-0.097  Sum_probs=59.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ++.|.+||..+.........  .......+.+.+.+..   +++...++.|.+|+............+.    ..+..++
T Consensus       170 ~~~i~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l---~v~~~~~~~v~~~~~~~~~~~~~~~~~~----~~p~~i~  240 (270)
T 1rwi_B          170 NNRVVKLEAESNNQVVLPFT--DITAPWGIAVDEAGTV---YVTEHNTNQVVKLLAGSTTSTVLPFTGL----NTPLAVA  240 (270)
T ss_dssp             GTEEEEECTTTCCEEECCCS--SCCSEEEEEECTTCCE---EEEETTTSCEEEECTTCSCCEECCCCSC----SCEEEEE
T ss_pred             CCEEEEEecCCCceEeeccc--CCCCceEEEECCCCCE---EEEECCCCcEEEEcCCCCcceeeccCCC----CCceeEE
Confidence            46788888776554221111  1123444666665533   5677778889999987554322111222    4688999


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+++.++++...++.|++++
T Consensus       241 ~~~~g~l~v~~~~~~~v~~~~  261 (270)
T 1rwi_B          241 VDSDRTVYVADRGNDRVVKLT  261 (270)
T ss_dssp             ECTTCCEEEEEGGGTEEEEEC
T ss_pred             ECCCCCEEEEECCCCEEEEEc
Confidence            999999999999999999875

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.18  E-value=2e-05  Score=47.13  Aligned_cols=69  Identities=10%  Similarity=0.004  Sum_probs=50.5

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCC----CeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGAD----GLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d----~~i~iwd  106 (106)
                      ....+.|.+.+..   ++++..++.|.+||..+++.......+.    ..+..++++|++.++++...+    +.|.+||
T Consensus        46 ~~~~~~~~~~g~l---~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d  118 (333)
T 2dg1_A           46 QLEGLNFDRQGQL---FLLDVFEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT  118 (333)
T ss_dssp             CEEEEEECTTSCE---EEEETTTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred             cccCcEECCCCCE---EEEECCCCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence            3455777776653   5778888999999998776544332344    689999999999988887766    6777765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.13  E-value=1.3e-05  Score=48.17  Aligned_cols=77  Identities=12%  Similarity=0.058  Sum_probs=52.0

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC---C--cEEEeeCCCccchheeccccccCCCC
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD---C--SIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d---~--~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      ++.|.+||+.+++.. .+      .......|+|.+..   ++..+.+   +  .+.+|++.+++.. .+....    . 
T Consensus        42 ~~~l~~~d~~~~~~~-~l------~~~~~~~~SpDg~~---la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~~----~-  105 (347)
T 2gop_A           42 ENTIVIENLKNNARR-FI------ENATMPRISPDGKK---IAFMRANEEKKVSEIWVADLETLSSK-KILEAK----N-  105 (347)
T ss_dssp             EEEEEEEETTTCCEE-EE------ESCEEEEECTTSSE---EEEEEEETTTTEEEEEEEETTTTEEE-EEEEES----E-
T ss_pred             cceEEEEeCCCCceE-Ec------ccCCCeEECCCCCE---EEEEEeccCCCcceEEEEECCCCceE-EEEcCC----C-
Confidence            678999999887752 22      23556889999887   4444322   3  3777788776643 333344    4 


Q ss_pred             eEEEEEcCCCCEEEEecC
Q psy17135         81 ILDVAFHPSKPFIASAGA   98 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~   98 (106)
                      +..+.|+|+++.|+.++.
T Consensus       106 ~~~~~wspdg~~l~~~~~  123 (347)
T 2gop_A          106 IRSLEWNEDSRKLLIVGF  123 (347)
T ss_dssp             EEEEEECTTSSEEEEEEE
T ss_pred             ccceeECCCCCEEEEEEc
Confidence            889999999998877653

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.12  E-value=2.5e-05  Score=47.56  Aligned_cols=79  Identities=6%  Similarity=-0.130  Sum_probs=52.4

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE--E
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV--A   85 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~--~   85 (106)
                      .|.+||+.+++.......  +........|+|.+..   |+.++.++.+.+||+.+++.......+.    ..+...  .
T Consensus        61 ~l~~~d~~~g~~~~lt~~--~~~~~~~~~~spdg~~---l~~~~~~~~l~~~d~~~g~~~~~~~~~~----~~~~~~~~~  131 (388)
T 3pe7_A           61 NYYLLDLNTQVATQLTEG--RGDNTFGGFLSPDDDA---LFYVKDGRNLMRVDLATLEENVVYQVPA----EWVGYGTWV  131 (388)
T ss_dssp             EEEEEETTTCEEEECCCS--SCBCSSSCEECTTSSE---EEEEETTTEEEEEETTTCCEEEEEECCT----TEEEEEEEE
T ss_pred             eEEEEeCCCCceEEeeeC--CCCCccceEEcCCCCE---EEEEeCCCeEEEEECCCCcceeeeechh----hccccccee
Confidence            488889988876333222  2222335679999888   7777778899999999887655444443    333333  3


Q ss_pred             EcCCCCEEEE
Q psy17135         86 FHPSKPFIAS   95 (106)
Q Consensus        86 ~~~~~~~~~s   95 (106)
                      ++|++..++.
T Consensus       132 ~~~dg~~l~~  141 (388)
T 3pe7_A          132 ANSDCTKLVG  141 (388)
T ss_dssp             ECTTSSEEEE
T ss_pred             ECCCCCeecc
Confidence            4888888763

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.11  E-value=1.4e-05  Score=49.32  Aligned_cols=92  Identities=7%  Similarity=-0.147  Sum_probs=65.9

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc-ccc
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH-RKK   76 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~-~~~   76 (106)
                      +|.+.|..+++.+..+...  . .. .+.++|.+..   +..+.          .++.|.+||..+++.+..+... ..+
T Consensus        47 ~vsvID~~t~~v~~~i~vG--~-~P-~i~~spDg~~---lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~  119 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGA--F-LS-LAVAGHSGSD---FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR  119 (368)
T ss_dssp             EEEEEETTTTEEEEEEEEC--T-TC-EEEECTTSSC---EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred             eEEEEECCCCeEEEEEeCC--C-CC-ceEECCCCCE---EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence            8999999999998877663  2 23 6888998887   34443          4678999999999998888644 100


Q ss_pred             C--CCCeEEEEEcCCCCEEEEecC--CCeEEE--cC
Q psy17135         77 F--DESILDVAFHPSKPFIASAGA--DGLAKV--FV  106 (106)
Q Consensus        77 ~--~~~v~~~~~~~~~~~~~s~~~--d~~i~i--wd  106 (106)
                      +  ......+.++|++++++.+..  +..+.+  +|
T Consensus       120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD  155 (368)
T 1mda_H          120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG  155 (368)
T ss_dssp             CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred             cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEc
Confidence            0  023457889999998877753  456776  65

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.07  E-value=0.00016  Score=43.63  Aligned_cols=91  Identities=7%  Similarity=0.033  Sum_probs=62.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--eccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE--ITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~v~~   83 (106)
                      .+.|.++|..+++.......... .....+.+.|.+..   +..+..  .|.+||..+++....  +....    .....
T Consensus       202 ~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~---lyv~~~--~v~~~d~~t~~~~~~~~~~~~~----~~p~g  271 (328)
T 3dsm_A          202 APSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDT---LYWINN--DIWRMPVEADRVPVRPFLEFRD----TKYYG  271 (328)
T ss_dssp             CCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCE---EEEESS--SEEEEETTCSSCCSSCSBCCCS----SCEEE
T ss_pred             CceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCE---EEEEcc--EEEEEECCCCceeeeeeecCCC----CceEE
Confidence            47899999998887555544211 23566888887776   444443  899999988775321  11112    56788


Q ss_pred             EEEcC-CCCEEEEe----cCCCeEEEcC
Q psy17135         84 VAFHP-SKPFIASA----GADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~-~~~~~~s~----~~d~~i~iwd  106 (106)
                      ++++| ++.++++.    ..++.|.+||
T Consensus       272 i~vdp~~g~lyva~~~~y~~~~~V~v~d  299 (328)
T 3dsm_A          272 LTVNPNNGEVYVADAIDYQQQGIVYRYS  299 (328)
T ss_dssp             EEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred             EEEcCCCCeEEEEcccccccCCEEEEEC
Confidence            99999 67777777    6788898886

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.06  E-value=8.9e-05  Score=45.76  Aligned_cols=92  Identities=8%  Similarity=-0.068  Sum_probs=62.4

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc-ccc
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH-RKK   76 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~-~~~   76 (106)
                      +|.++|..+++.+..+...  . .. .+.++|++..   +..+.          .++.|.++|..+.+.+..+... ..+
T Consensus        48 ~v~v~D~~t~~~~~~i~~g--~-~p-~i~~spDg~~---lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~  120 (373)
T 2mad_H           48 QQWVLDAGSGSILGHVNGG--F-LP-NPVAAHSGSE---FALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR  120 (373)
T ss_pred             EEEEEECCCCeEEEEecCC--C-CC-CeEECCCCCE---EEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence            8999999999886555432  2 23 7888898887   44443          3678999999988777666433 100


Q ss_pred             C--CCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135         77 F--DESILDVAFHPSKPFIASAGA--DGLAKVFV  106 (106)
Q Consensus        77 ~--~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd  106 (106)
                      .  ......+.++|++++++.+..  ++.|.++|
T Consensus       121 ~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD  154 (373)
T 2mad_H          121 FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV  154 (373)
T ss_pred             cccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence            0  023457899999999887764  46777765

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.05  E-value=1.3e-05  Score=52.20  Aligned_cols=94  Identities=6%  Similarity=-0.067  Sum_probs=57.2

Q ss_pred             ceEEEEeCc-cCc--eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchheecccccc----C
Q psy17135          7 SVIYIWTLL-ELQ--TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEITAHRKK----F   77 (106)
Q Consensus         7 ~~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~----~   77 (106)
                      ..|.+||+. ++.  ....+.. .+........|+|.+..   +++++.++  .+.+||+.+++.......+...    -
T Consensus       217 ~~i~~~d~~~~g~~~~~~~l~~-~~~~~~~~~~~spdg~l---~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w  292 (662)
T 3azo_A          217 TELKTARVTEDGRFADTRTLLG-GPEEAIAQAEWAPDGSL---IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW  292 (662)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEE-ETTBCEEEEEECTTSCE---EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred             cEEEEEEECCCCcccccEEeCC-CCCceEcceEECCCCeE---EEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence            579999998 561  2222222 12234556889998873   67777788  4555666556533222222100    0


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         78 DESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ...+..++|+|++.+++++.. +.+++|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~  319 (662)
T 3azo_A          293 TPGMRWFAPLANGLIAVVHGK-GAAVLG  319 (662)
T ss_dssp             STTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred             cccCceEeEeCCCEEEEEEEc-CccEEE
Confidence            011457889999999999988 888887

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.02  E-value=2.3e-05  Score=48.78  Aligned_cols=77  Identities=16%  Similarity=0.050  Sum_probs=57.5

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheec---------c
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEIT---------A   72 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~---------~   72 (106)
                      ..||.|.+||++++.... .     ...+.+++|+|.+     ++.|..||.+++|+...+..  .+.+.         +
T Consensus       143 ~~dG~L~v~dl~~~~~~~-~-----~~~Vs~v~WSpkG-----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~  211 (388)
T 1xip_A          143 NSVNDLSALDLRTKSTKQ-L-----AQNVTSFDVTNSQ-----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPV  211 (388)
T ss_dssp             ETTSEEEEEETTTCCEEE-E-----EESEEEEEECSSE-----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCT
T ss_pred             ECCCCEEEEEccCCcccc-c-----cCCceEEEEcCCc-----eEEEEcCCcEEEEcCCCccccccceecCCcccccccC
Confidence            479999999999887632 1     2357789999988     25688899999998877664  44452         1


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEE
Q psy17135         73 HRKKFDESILDVAFHPSKPFIAS   95 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s   95 (106)
                      |.    ..|.++.|.+++.++++
T Consensus       212 ~~----~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          212 EE----YSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             TT----SEEEEEEESSSSEEEEE
T ss_pred             CC----eeEEEEEEecCCeEEEE
Confidence            33    67999999998887765

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.02  E-value=7.5e-05  Score=44.15  Aligned_cols=95  Identities=11%  Similarity=0.125  Sum_probs=58.1

Q ss_pred             CCceEEEEeCc-cCceee--e-cccCCCC-CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135          5 PSSVIYIWTLL-ELQTYA--R-NDCPELN-SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         5 ~d~~i~iwd~~-~~~~~~--~-~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      .++.|.+||.. +++...  . .....+. .....+.+.+.+..   .++...++.|..||.++++.+..+..+.    .
T Consensus       196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l---~v~~~~~~~i~~~d~~~g~~~~~~~~~~----~  268 (314)
T 1pjx_A          196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL---LVANWGSSHIEVFGPDGGQPKMRIRCPF----E  268 (314)
T ss_dssp             TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE---EEEEETTTEEEEECTTCBSCSEEEECSS----S
T ss_pred             CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE---EEEEcCCCEEEEEcCCCCcEeEEEeCCC----C
Confidence            35677888875 333110  1 1111111 22334556665543   5665567789999998777766666555    6


Q ss_pred             CeEEEEEcCCCC-EEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKP-FIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~-~~~s~~~d~~i~iwd  106 (106)
                      .+.+++++|++. ++++...++.+..|+
T Consensus       269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~  296 (314)
T 1pjx_A          269 KPSNLHFKPQTKTIFVTEHENNAVWKFE  296 (314)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence            789999999998 556666667776653

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.00  E-value=0.00021  Score=41.38  Aligned_cols=92  Identities=5%  Similarity=-0.086  Sum_probs=57.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ++.|.+|+..+....  ............+.+.+.+..   +++...++.|.+|+..............    ..+..++
T Consensus       128 ~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~  198 (270)
T 1rwi_B          128 NNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNV---YVTDTDNNRVVKLEAESNNQVVLPFTDI----TAPWGIA  198 (270)
T ss_dssp             GTEEEEECTTCCSCE--ECCCCSCCSCCCEEECTTCCE---EEEEGGGTEEEEECTTTCCEEECCCSSC----CSEEEEE
T ss_pred             CCEEEEEECCCceeE--eeccccCCCceeEEEeCCCCE---EEEECCCCEEEEEecCCCceEeecccCC----CCceEEE
Confidence            456777765544331  111111223455667776643   5666667889999987655332222232    5678999


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+++..+++...++.|..|+
T Consensus       199 ~d~~g~l~v~~~~~~~v~~~~  219 (270)
T 1rwi_B          199 VDEAGTVYVTEHNTNQVVKLL  219 (270)
T ss_dssp             ECTTCCEEEEETTTSCEEEEC
T ss_pred             ECCCCCEEEEECCCCcEEEEc
Confidence            999998888888888888875

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.00  E-value=3.8e-05  Score=51.05  Aligned_cols=93  Identities=5%  Similarity=-0.020  Sum_probs=55.1

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--------------cEEEeeCCCccchheecc
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--------------SIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--------------~v~iwd~~~~~~~~~~~~   72 (106)
                      .+|++||+.+++.+.....   ......+.|+|+ ..   |+.++.+.              .|.+|++.+++....+..
T Consensus       189 ~~i~v~dl~tg~~~~~~~~---~~~~~~~~wspD-~~---l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~  261 (741)
T 1yr2_A          189 RTVKFVGVADGKPLADELK---WVKFSGLAWLGN-DA---LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF  261 (741)
T ss_dssp             EEEEEEETTTCCEEEEEEE---EEESCCCEESTT-SE---EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE
T ss_pred             EEEEEEECCCCCCCCccCC---CceeccEEEECC-CE---EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe
Confidence            5799999999887443111   112346789998 55   34443333              388899877653222111


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEEecCCC-----eEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSKPFIASAGADG-----LAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~-----~i~iwd  106 (106)
                      ....+...+..+.|+|++++++..+.++     .+++||
T Consensus       262 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d  300 (741)
T 1yr2_A          262 ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVAR  300 (741)
T ss_dssp             CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEE
T ss_pred             ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEE
Confidence            1100003578899999999877666443     676664

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.00  E-value=2.5e-05  Score=48.57  Aligned_cols=94  Identities=5%  Similarity=-0.091  Sum_probs=65.9

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccccc
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAHRK   75 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~   75 (106)
                      ++.|.+.|..+++.+......  . .. .+.++|.+..   +..++          .++.|.+||..+.+.+..+.....
T Consensus        58 ~~~V~ViD~~t~~v~~~I~vG--~-~P-~va~spDG~~---lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g  130 (386)
T 3sjl_D           58 VTQQFVIDGEAGRVIGMIDGG--F-LP-NPVVADDGSF---IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA  130 (386)
T ss_dssp             SEEEEEEETTTTEEEEEEEEC--S-SC-EEEECTTSSC---EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred             CCEEEEEECCCCeEEEEEECC--C-CC-cEEECCCCCE---EEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc
Confidence            679999999999987766652  2 22 4888998887   43433          356799999999988887754320


Q ss_pred             c---CCCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135         76 K---FDESILDVAFHPSKPFIASAGA--DGLAKVFV  106 (106)
Q Consensus        76 ~---~~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd  106 (106)
                      +   .......+.++|+++++..+..  ++.|.++|
T Consensus       131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID  166 (386)
T 3sjl_D          131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD  166 (386)
T ss_dssp             CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred             cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEE
Confidence            0   0024567899999998776653  67787765

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.96  E-value=4.2e-05  Score=46.52  Aligned_cols=96  Identities=14%  Similarity=0.033  Sum_probs=56.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeee-CCCCceEEEeeCCC----CcEEEeeCCCccchheeccccccCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIP-SSNISLFDSRPGHD----CSIRLWNLDNKTCVQEITAHRKKFD   78 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~   78 (106)
                      ..+..|.+||+.+++......   +........|+| .+....+ ++....    ..+.+|++..++. ..+..+..  .
T Consensus       165 ~~~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~sp~dg~~l~~-~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~--~  237 (396)
T 3c5m_A          165 NPTCRLIKVDIETGELEVIHQ---DTAWLGHPIYRPFDDSTVGF-CHEGPHDLVDARMWLVNEDGSNV-RKIKEHAE--G  237 (396)
T ss_dssp             CCCEEEEEEETTTCCEEEEEE---ESSCEEEEEEETTEEEEEEE-EECSCSSSCSCCCEEEETTSCCC-EESSCCCT--T
T ss_pred             CCcceEEEEECCCCcEEeecc---CCcccccceECCCCCCEEEE-EecCCCCCCCceEEEEECCCCce-eEeeccCC--C
Confidence            356789999999887633332   123345578888 5554222 222222    4688888865542 23322210  0


Q ss_pred             CCeEEEEEcCCCCEEEEecCC-----CeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGAD-----GLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d-----~~i~iwd  106 (106)
                      ..+..+.|+|+++.|+.++.+     +.+++||
T Consensus       238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d  270 (396)
T 3c5m_A          238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN  270 (396)
T ss_dssp             EEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred             ccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence            357788999999976665433     3488775

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=97.96  E-value=0.00023  Score=42.58  Aligned_cols=87  Identities=11%  Similarity=-0.062  Sum_probs=54.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC----CcEEEeeCCCccchheeccccccCCCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD----CSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      .++.|.+||..+++.......  +...+..+.+.+.+..   +++...+    +.|.+||..++.....+....  ....
T Consensus        64 ~~~~i~~~d~~~~~~~~~~~~--~~~~~~~i~~~~dg~l---~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~  136 (333)
T 2dg1_A           64 FEGNIFKINPETKEIKRPFVS--HKANPAAIKIHKDGRL---FVCYLGDFKSTGGIFAATENGDNLQDIIEDLS--TAYC  136 (333)
T ss_dssp             TTCEEEEECTTTCCEEEEEEC--SSSSEEEEEECTTSCE---EEEECTTSSSCCEEEEECTTSCSCEEEECSSS--SCCC
T ss_pred             CCCEEEEEeCCCCcEEEEeeC--CCCCcceEEECCCCcE---EEEeCCCCCCCceEEEEeCCCCEEEEEEccCc--cCCc
Confidence            467888999887765332211  1233555777776654   5565555    689999988766432232111  0157


Q ss_pred             eEEEEEcCCCCEEEEecC
Q psy17135         81 ILDVAFHPSKPFIASAGA   98 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~   98 (106)
                      +..+.++|++..+++...
T Consensus       137 ~~~i~~d~~g~l~v~~~~  154 (333)
T 2dg1_A          137 IDDMVFDSKGGFYFTDFR  154 (333)
T ss_dssp             EEEEEECTTSCEEEEECC
T ss_pred             ccceEECCCCCEEEEecc
Confidence            889999999988877654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.94  E-value=4.6e-05  Score=46.33  Aligned_cols=93  Identities=8%  Similarity=-0.083  Sum_probs=57.0

Q ss_pred             eEEEEeCccCceeeecccCCC---CCCCCeeEeeeCCCCceEEEeeCC--CCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          8 VIYIWTLLELQTYARNDCPEL---NSEPPACQTIPSSNISLFDSRPGH--DCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .....|..+++.+..+.....   ........|+|.+....  ++...  +..+.+||+.+++.. .+.....   ....
T Consensus        11 ~~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~--~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~---~~~~   84 (396)
T 3c5m_A           11 FETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLL--FAGDFDGNRNYYLLNLETQQAV-QLTEGKG---DNTF   84 (396)
T ss_dssp             EEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEE--EEECTTSSCEEEEEETTTTEEE-ECCCSSC---BCTT
T ss_pred             hheeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEE--EEEecCCCceEEEEECCCCcEE-EeecCCC---Cccc
Confidence            345668888877555543211   11245577889888732  23222  346788898877643 3332320   2223


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...|+|+++.|+.++.++.+++||
T Consensus        85 ~~~~spdg~~l~~~~~~~~l~~~d  108 (396)
T 3c5m_A           85 GGFISTDERAFFYVKNELNLMKVD  108 (396)
T ss_dssp             TCEECTTSSEEEEEETTTEEEEEE
T ss_pred             cceECCCCCEEEEEEcCCcEEEEE
Confidence            367999999998888888888774

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=97.93  E-value=0.00027  Score=41.68  Aligned_cols=86  Identities=7%  Similarity=-0.019  Sum_probs=56.1

Q ss_pred             CCceEEEEeCc-cCce---eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCC
Q psy17135          5 PSSVIYIWTLL-ELQT---YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDES   80 (106)
Q Consensus         5 ~d~~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~   80 (106)
                      .++.|.+||+. +++.   ...+  .........+.+.+.+..   .++.  ++.|.+|+.. ++.+..+..+.    . 
T Consensus       191 ~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l---~v~~--~~~v~~~~~~-g~~~~~~~~~~----~-  257 (296)
T 3e5z_A          191 GDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLI---WASA--GDGVHVLTPD-GDELGRVLTPQ----T-  257 (296)
T ss_dssp             TTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCE---EEEE--TTEEEEECTT-SCEEEEEECSS----C-
T ss_pred             CCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCE---EEEc--CCeEEEECCC-CCEEEEEECCC----C-
Confidence            45788999986 4443   1222  112333445667776653   3444  7789999986 77677776665    5 


Q ss_pred             eEEEEE-cCCCCEEEEecCCCeEE
Q psy17135         81 ILDVAF-HPSKPFIASAGADGLAK  103 (106)
Q Consensus        81 v~~~~~-~~~~~~~~s~~~d~~i~  103 (106)
                      +.+++| .|++..|+.++.++..+
T Consensus       258 ~~~~~f~~~d~~~L~v~t~~~l~~  281 (296)
T 3e5z_A          258 TSNLCFGGPEGRTLYMTVSTEFWS  281 (296)
T ss_dssp             CCEEEEESTTSCEEEEEETTEEEE
T ss_pred             ceeEEEECCCCCEEEEEcCCeEEE
Confidence            888899 58888887777776544

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=97.89  E-value=9.8e-05  Score=43.58  Aligned_cols=67  Identities=7%  Similarity=-0.033  Sum_probs=52.8

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .....|.|.+...  ++++..++.|..|+..++  ...+..+.    ..+..++++|++.++++...++.|.+||
T Consensus        30 ~eg~~~d~~g~~l--~~~~~~~~~i~~~~~~~~--~~~~~~~~----~~~~~l~~~~dg~l~v~~~~~~~i~~~d   96 (296)
T 3e5z_A           30 TEGPVYVPARSAV--IFSDVRQNRTWAWSDDGQ--LSPEMHPS----HHQNGHCLNKQGHLIACSHGLRRLERQR   96 (296)
T ss_dssp             EEEEEEEGGGTEE--EEEEGGGTEEEEEETTSC--EEEEESSC----SSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             ccCCeEeCCCCEE--EEEeCCCCEEEEEECCCC--eEEEECCC----CCcceeeECCCCcEEEEecCCCeEEEEc
Confidence            4558888888732  678888899999999876  55555555    6789999999999888887778888875

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=97.89  E-value=4.8e-05  Score=50.17  Aligned_cols=66  Identities=5%  Similarity=-0.050  Sum_probs=44.0

Q ss_pred             CCeeEeeeCCCCceEEE--eeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135         32 PPACQTIPSSNISLFDS--RPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~--s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~  101 (106)
                      .....|+|++....+..  .|+.+..|++||+.+++.+..  .+..  ......++|+||++.|+.++.|..
T Consensus       123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~--~~~~~~~~wspDg~~l~~~~~d~~  190 (695)
T 2bkl_A          123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIE--GGKYATPKWTPDSKGFYYEWLPTD  190 (695)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBS--CCTTCCCEECTTSSEEEEEECCCC
T ss_pred             EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccC--cccccceEEecCCCEEEEEEecCC
Confidence            44578899888732211  456668899999999876411  1110  012267899999999988887665

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=97.84  E-value=9.5e-05  Score=48.12  Aligned_cols=57  Identities=14%  Similarity=0.124  Sum_probs=48.3

Q ss_pred             eEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         45 LFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        45 ~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++++...++.|.++|..+++.+..+...     ..+..+.|+|+++++.+++.++.|.+||
T Consensus       168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~dg~V~viD  224 (567)
T 1qks_A          168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-----YAVHISRLSASGRYLFVIGRDGKVNMID  224 (567)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             eEEEEeCCCCeEEEEECCCCeEEEEEeCC-----CCccceEECCCCCEEEEEcCCCeEEEEE
Confidence            34688888999999999999988887644     3667899999999998889999999886

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.82  E-value=9.4e-05  Score=49.10  Aligned_cols=79  Identities=11%  Similarity=0.029  Sum_probs=54.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      +|.|+.||+.+++.+........   .....+...+..   ++.++.|+.++.||.++|+.+..+.....   .....+.
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~taggl---vf~gt~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~t  524 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVTI---FNGGTLSTAGNL---VFEGSADGRVIAYAADTGEKLWEQPAASG---VMAAPVT  524 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCEE
T ss_pred             ceeEEEEECCCCCeEeEccCCCC---ccCccceECCCE---EEEECCCCcEEEEECCCCccceeeeCCCC---cccCceE
Confidence            58999999999998666554221   222234444554   67789999999999999999888765542   2334466


Q ss_pred             EcCCCCEE
Q psy17135         86 FHPSKPFI   93 (106)
Q Consensus        86 ~~~~~~~~   93 (106)
                      |..+++.+
T Consensus       525 y~~~G~qy  532 (689)
T 1yiq_A          525 YSVDGEQY  532 (689)
T ss_dssp             EEETTEEE
T ss_pred             EEECCEEE
Confidence            77777754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=97.81  E-value=0.0004  Score=41.07  Aligned_cols=91  Identities=8%  Similarity=0.012  Sum_probs=59.2

Q ss_pred             CceEEEEeCccCceeeecccCC----CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          6 SSVIYIWTLLELQTYARNDCPE----LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ++.|..+|. +++.+..+....    ++.....+...+.+..   +++...++.|..||.+ |+.+..+....     ..
T Consensus        98 ~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~---lv~~~~~~~v~~~d~~-G~~~w~~~~~~-----~~  167 (276)
T 3no2_A           98 PSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY---LVPLFATSEVREIAPN-GQLLNSVKLSG-----TP  167 (276)
T ss_dssp             TEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE---EEEETTTTEEEEECTT-SCEEEEEECSS-----CC
T ss_pred             CCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE---EEEecCCCEEEEECCC-CCEEEEEECCC-----Cc
Confidence            345555554 455544443321    1112223444555555   7888899999999998 88887776542     44


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+...+++..+++++.++++..+|
T Consensus       168 ~~~~~~~~g~~~v~~~~~~~v~~~d  192 (276)
T 3no2_A          168 FSSAFLDNGDCLVACGDAHCFVQLN  192 (276)
T ss_dssp             CEEEECTTSCEEEECBTTSEEEEEC
T ss_pred             cceeEcCCCCEEEEeCCCCeEEEEe
Confidence            5677788999999888888887664

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.80  E-value=2.8e-06  Score=52.19  Aligned_cols=60  Identities=7%  Similarity=-0.159  Sum_probs=34.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI   70 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~   70 (106)
                      ..|+.|+.||..+|+.+..+..    .......+...+..   +++++.|+.+..||..+|+.+..+
T Consensus        16 s~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~---~v~~s~dg~l~a~d~~tG~~~w~~   75 (369)
T 2hz6_A           16 TLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPA---FLPDPNDGSLYTLGSKNNEGLTKL   75 (369)
T ss_dssp             ETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CC---EEECTTTCCEEEC-----CCSEEC
T ss_pred             cCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCE---EEEeCCCCEEEEEECCCCceeeee
Confidence            3578999999999998666554    12223323343434   677789999999999888764433

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=97.74  E-value=7.2e-05  Score=49.45  Aligned_cols=65  Identities=5%  Similarity=-0.033  Sum_probs=42.8

Q ss_pred             CCeeEeeeCCCCceEEEe--eCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCe
Q psy17135         32 PPACQTIPSSNISLFDSR--PGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGL  101 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~  101 (106)
                      .....|+|++....+...  |+....|++||+.+++.......+.     .+..++|+||++.|+.++.++.
T Consensus       127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-----~~~~~~wspDg~~l~~~~~~~~  193 (710)
T 2xdw_A          127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-----KFSCMAWTHDGKGMFYNAYPQQ  193 (710)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-----CSCCEEECTTSSEEEEEECCCC
T ss_pred             EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-----ccceEEEEeCCCEEEEEEECCc
Confidence            345788998887422111  1222389999999988655332222     3567899999999888876654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=97.72  E-value=9.5e-05  Score=46.59  Aligned_cols=93  Identities=8%  Similarity=-0.029  Sum_probs=65.5

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC----------CCCcEEEeeCCCccchheeccc-cc
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG----------HDCSIRLWNLDNKTCVQEITAH-RK   75 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~v~iwd~~~~~~~~~~~~~-~~   75 (106)
                      +.|.++|+.+++.+..+...  . .. .+.++|++..   +..+.          .++.|.++|..+.+.+..+... ..
T Consensus        99 ~~VsVID~~t~~vv~~I~vG--~-~P-gia~SpDgk~---lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~  171 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGG--F-LP-HPVAAEDGSF---FAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP  171 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEEC--S-SC-EEEECTTSSC---EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred             CeEEEEECCCCEEEEEEECC--C-CC-ceEECCCCCE---EEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence            79999999999997777663  2 23 7888898887   44443          3678999999999888777533 10


Q ss_pred             cC--CCCeEEEEEcCCCCEEEEecC--CCeEEEcC
Q psy17135         76 KF--DESILDVAFHPSKPFIASAGA--DGLAKVFV  106 (106)
Q Consensus        76 ~~--~~~v~~~~~~~~~~~~~s~~~--d~~i~iwd  106 (106)
                      +.  ......+.++|+++++..+..  ++.|.+.|
T Consensus       172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID  206 (426)
T 3c75_H          172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVD  206 (426)
T ss_dssp             CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEE
T ss_pred             ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEE
Confidence            00  023456789999998877653  56676654

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.69  E-value=0.002  Score=39.08  Aligned_cols=93  Identities=9%  Similarity=-0.004  Sum_probs=57.0

Q ss_pred             CceEEEEeCccCceeeecccCC----CCCCCCeeEeeeCCCCceEEEeeC---CCCcEEEeeCCCccchheeccccc---
Q psy17135          6 SSVIYIWTLLELQTYARNDCPE----LNSEPPACQTIPSSNISLFDSRPG---HDCSIRLWNLDNKTCVQEITAHRK---   75 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~---~d~~v~iwd~~~~~~~~~~~~~~~---   75 (106)
                      ++.|.+||+.+++.+..+..+.    +......+.+.+.+...  +++..   .++.|.+||+.+++..+.+..|..   
T Consensus        92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~--yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~  169 (343)
T 2qe8_A           92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFV--YISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP  169 (343)
T ss_dssp             CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEE--EEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC
T ss_pred             CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEE--EEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc
Confidence            5789999999888655554421    11234556666654432  45555   678899999987765444432110   


Q ss_pred             --------c--------------CCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         76 --------K--------------FDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        76 --------~--------------~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                              .              ....+..++++|+++.+..+..++
T Consensus       170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~  216 (343)
T 2qe8_A          170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS  216 (343)
T ss_dssp             CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred             cccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence                    0              002467899999998766655444

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=97.65  E-value=0.0021  Score=37.45  Aligned_cols=90  Identities=8%  Similarity=-0.027  Sum_probs=55.8

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec--cccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT--AHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~~~v~~   83 (106)
                      ++.|..||.. ++. ..+...........+.+.+.+..   .++...++.|..|+.. ++ ...+.  ...    ..+..
T Consensus        35 ~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~----~~~~~  103 (299)
T 2z2n_A           35 ANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEV---WFTENAANKIGRITKK-GI-IKEYTLPNPD----SAPYG  103 (299)
T ss_dssp             TTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCE---EEEETTTTEEEEECTT-SC-EEEEECSSTT----CCEEE
T ss_pred             CCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCE---EEeCCCCCeEEEECCC-Cc-EEEEeCCCcC----CCcee
Confidence            5678888887 443 23322212233444555555443   5666667889999876 33 22222  122    57889


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++.+++.++++...++.+..||
T Consensus       104 i~~~~~g~l~v~~~~~~~i~~~d  126 (299)
T 2z2n_A          104 ITEGPNGDIWFTEMNGNRIGRIT  126 (299)
T ss_dssp             EEECTTSCEEEEETTTTEEEEEC
T ss_pred             eEECCCCCEEEEecCCceEEEEC
Confidence            99999999888887777887764

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.51  E-value=4.1e-05  Score=47.04  Aligned_cols=88  Identities=13%  Similarity=0.049  Sum_probs=44.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|+.||.++|+.+..+...  .    .....|.+..   ++.++.++.+..||.++|+.+..+....      ...
T Consensus        99 ~~dg~v~a~D~~tG~~~w~~~~~--~----~~~~~p~~~~---v~~~~~dg~v~a~d~~tG~~~W~~~~~~------~~~  163 (369)
T 2hz6_A           99 KKQDIWYVIDLLTGEKQQTLSSA--F----ADSLSPSTSL---LYLGRTEYTITMYDTKTRELRWNATYFD------YAA  163 (369)
T ss_dssp             EEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE------ECC
T ss_pred             eCCCEEEEEECCCCcEEEEecCC--C----cccccccCCE---EEEEecCCEEEEEECCCCCEEEeEeccc------ccC
Confidence            35788999999999985555432  1    1223454444   6788889999999999998766554221      011


Q ss_pred             EEEcCCC---CEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSK---PFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~---~~~~s~~~d~~i~iwd  106 (106)
                      ..+.++.   ..++.++.++.+..||
T Consensus       164 ~~~~~~~~~~~~v~~~~~dg~v~a~d  189 (369)
T 2hz6_A          164 SLPEDDVDYKMSHFVSNGDGLVVTVD  189 (369)
T ss_dssp             BCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred             ccccCCccccceEEEECCCCEEEEEE
Confidence            1122221   3455566778777765

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.40  E-value=0.0051  Score=36.47  Aligned_cols=90  Identities=4%  Similarity=-0.072  Sum_probs=58.0

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc-cccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH-RKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~   83 (106)
                      .++.|++.|+.+++.+.......+. ....+..  .+.. . .++.-.++.+.++|..+.+.+.++... .    .. . 
T Consensus        42 ~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~--~g~~-l-yv~t~~~~~v~viD~~t~~v~~~i~~g~~----~g-~-  110 (266)
T 2iwa_A           42 GRSSVRQVALQTGKVENIHKMDDSY-FGEGLTL--LNEK-L-YQVVWLKNIGFIYDRRTLSNIKNFTHQMK----DG-W-  110 (266)
T ss_dssp             TTCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTE-E-EEEETTCSEEEEEETTTTEEEEEEECCSS----SC-C-
T ss_pred             CCCEEEEEECCCCCEEEEEecCCCc-ceEEEEE--eCCE-E-EEEEecCCEEEEEECCCCcEEEEEECCCC----Ce-E-
Confidence            3678999999999987776653211 1112332  2333 2 466677889999999999888887643 2    22 2 


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       .+++++..++.+..++.+.++|
T Consensus       111 -glt~Dg~~l~vs~gs~~l~viD  132 (266)
T 2iwa_A          111 -GLATDGKILYGSDGTSILYEID  132 (266)
T ss_dssp             -EEEECSSSEEEECSSSEEEEEC
T ss_pred             -EEEECCCEEEEECCCCeEEEEE
Confidence             2455666655555677887765

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.38  E-value=0.0063  Score=35.64  Aligned_cols=89  Identities=9%  Similarity=-0.003  Sum_probs=57.1

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .+.|+.+|+++++.+.....+...- ...+..  .+.. . ....-.++.+.++|..+.+.+.++....    .. ..++
T Consensus        42 ~S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~--~~~~-l-y~ltw~~~~v~v~D~~tl~~~~ti~~~~----~G-wglt  111 (243)
T 3mbr_X           42 RSSVRKVDLETGRILQRAEVPPPYF-GAGIVA--WRDR-L-IQLTWRNHEGFVYDLATLTPRARFRYPG----EG-WALT  111 (243)
T ss_dssp             SCEEEEEETTTCCEEEEEECCTTCC-EEEEEE--ETTE-E-EEEESSSSEEEEEETTTTEEEEEEECSS----CC-CEEE
T ss_pred             CceEEEEECCCCCEEEEEeCCCCcc-eeEEEE--eCCE-E-EEEEeeCCEEEEEECCcCcEEEEEeCCC----Cc-eEEe
Confidence            4689999999999987776642211 111222  2333 2 3556678899999999999888887543    22 3333


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                        +++..++.+..++.+.++|
T Consensus       112 --~dg~~L~vSdgs~~l~~iD  130 (243)
T 3mbr_X          112 --SDDSHLYMSDGTAVIRKLD  130 (243)
T ss_dssp             --ECSSCEEEECSSSEEEEEC
T ss_pred             --eCCCEEEEECCCCeEEEEe
Confidence              4555555555577888775

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.38  E-value=0.00099  Score=44.25  Aligned_cols=80  Identities=5%  Similarity=-0.047  Sum_probs=54.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .+.|..||+.+++.+.......   ..........+..   ++.++.|+.+++||.++++.+..+.....   .....+.
T Consensus       456 ~g~l~A~D~~tG~~~W~~~~~~---~~~~g~~~~~g~~---v~~g~~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~~  526 (677)
T 1kb0_A          456 FGRLLAWDPVAQKAAWSVEHVS---PWNGGTLTTAGNV---VFQGTADGRLVAYHAATGEKLWEAPTGTG---VVAAPST  526 (677)
T ss_dssp             EEEEEEEETTTTEEEEEEEESS---SCCCCEEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCEE
T ss_pred             ccEEEEEeCCCCcEEeecCCCC---CCcCcceEeCCCE---EEEECCCCcEEEEECCCCceeeeeeCCCC---cccCCEE
Confidence            4899999999999866655421   1222334455554   56788999999999999999888865442   3334556


Q ss_pred             EcCCCCEEE
Q psy17135         86 FHPSKPFIA   94 (106)
Q Consensus        86 ~~~~~~~~~   94 (106)
                      |.++++.++
T Consensus       527 y~~~G~~~v  535 (677)
T 1kb0_A          527 YMVDGRQYV  535 (677)
T ss_dssp             EEETTEEEE
T ss_pred             EEeCCEEEE
Confidence            667776543

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=97.37  E-value=0.0016  Score=40.59  Aligned_cols=64  Identities=11%  Similarity=0.136  Sum_probs=46.1

Q ss_pred             CceEEEEeCccCceeeecccCC-----CCCCCCeeEeeeCCCCceEEEeeC--CCCcEEEeeCCCccchheecc
Q psy17135          6 SSVIYIWTLLELQTYARNDCPE-----LNSEPPACQTIPSSNISLFDSRPG--HDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~--~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      ++.|.+||..+++.+.......     .......+.++|++..   +..++  .++.|.++|..+++.+.++..
T Consensus       108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~---lyVan~~~~~~VsVID~~t~~vv~tI~v  178 (386)
T 3sjl_D          108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT---LLFYQFSPAPAVGVVDLEGKAFKRMLDV  178 (386)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSE---EEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred             CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCE---EEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence            5789999999999877665421     0113455788888877   44443  368899999999998887753

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=97.35  E-value=0.00084  Score=40.24  Aligned_cols=83  Identities=11%  Similarity=0.073  Sum_probs=49.2

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCe-eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPA-CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ...|.+||  +++.. .+ ...+...+.. ..|. .+    ++++++.++.+++| +.+++. ..+..+.    ..+..+
T Consensus       243 ~~~l~~~d--~~~~~-~l-~~~~~~~~~~~~~~s-dg----~~~~~~~~~~~~l~-~~~g~~-~~~~~~~----~~v~~~  307 (347)
T 2gop_A          243 HNKLYIYD--GKEVM-GI-LDEVDRGVGQAKIKD-GK----VYFTLFEEGSVNLY-IWDGEI-KPIAKGR----HWIMGF  307 (347)
T ss_dssp             SCEEEEEC--SSCEE-ES-STTCCSEEEEEEEET-TE----EEEEEEETTEEEEE-EESSSE-EEEECSS----SEEEEE
T ss_pred             cceEEEEC--CCceE-ec-cccCCcccCCccEEc-Cc----EEEEEecCCcEEEE-EcCCce-EEEecCC----CeEEee
Confidence            45788888  55441 22 2112222332 5565 33    36888889999999 875554 3333344    678899


Q ss_pred             EEcCCCCEEEEecCCCeE-EEc
Q psy17135         85 AFHPSKPFIASAGADGLA-KVF  105 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i-~iw  105 (106)
                      +|+|  ..+++++.++.. .+|
T Consensus       308 ~~s~--~~~~~~~~~~~~~~l~  327 (347)
T 2gop_A          308 DVDE--IVVYLKETATRLRELF  327 (347)
T ss_dssp             EESS--SEEEEEECSSSCCEEE
T ss_pred             eeeC--cEEEEEcCCCChHHhe
Confidence            9999  566666655543 444

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.33  E-value=0.0019  Score=42.85  Aligned_cols=88  Identities=9%  Similarity=-0.015  Sum_probs=52.6

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-------------CcEEEeeCCCccch----he
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-------------CSIRLWNLDNKTCV----QE   69 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-------------~~v~iwd~~~~~~~----~~   69 (106)
                      .+|++||+.+++.+.. ...  ........|+ ++..   |+.++.+             ..|++|++.+++..    ..
T Consensus       155 ~~i~v~dl~tg~~~~~-~~~--~~k~~~~~Ws-Dg~~---l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~  227 (693)
T 3iuj_A          155 REIHLMDVESKQPLET-PLK--DVKFSGISWL-GNEG---FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG  227 (693)
T ss_dssp             EEEEEEETTTCSEEEE-EEE--EEESCCCEEE-TTTE---EEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEES
T ss_pred             EEEEEEECCCCCCCcc-ccC--CceeccEEEe-CCCE---EEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEe
Confidence            6899999999986433 111  1113456788 7766   3444333             34889998876532    22


Q ss_pred             ecc-ccccCCCCeEEEEEcCCCCEEE-EecC---CCeEEEc
Q psy17135         70 ITA-HRKKFDESILDVAFHPSKPFIA-SAGA---DGLAKVF  105 (106)
Q Consensus        70 ~~~-~~~~~~~~v~~~~~~~~~~~~~-s~~~---d~~i~iw  105 (106)
                      ... +.    .....+.++|++++++ +.+.   ...++++
T Consensus       228 ~~~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~  264 (693)
T 3iuj_A          228 AIPAQH----HRYVGATVTEDDRFLLISAANSTSGNRLYVK  264 (693)
T ss_dssp             CSGGGC----CSEEEEEECTTSCEEEEEEESSSSCCEEEEE
T ss_pred             cCCCCC----eEEEEEEEcCCCCEEEEEEccCCCCcEEEEE
Confidence            222 23    4577889999999864 3332   2356655

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.32  E-value=0.0039  Score=37.02  Aligned_cols=89  Identities=7%  Similarity=-0.098  Sum_probs=57.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .+|.|+.+|+++++.+... ..  . .....-..+.+.. . ....-.++.+.++|..+.+.+.++....    .. ..+
T Consensus        73 ~~g~v~~iD~~Tgkv~~~~-l~--~-~~FgeGit~~g~~-L-y~ltw~~~~v~V~D~~Tl~~~~ti~~~~----eG-wGL  141 (268)
T 3nok_A           73 HQGTLRQLSLESAQPVWME-RL--G-NIFAEGLASDGER-L-YQLTWTEGLLFTWSGMPPQRERTTRYSG----EG-WGL  141 (268)
T ss_dssp             TTTEEEECCSSCSSCSEEE-EC--T-TCCEEEEEECSSC-E-EEEESSSCEEEEEETTTTEEEEEEECSS----CC-CCE
T ss_pred             CCCEEEEEECCCCcEEeEE-CC--C-CcceeEEEEeCCE-E-EEEEccCCEEEEEECCcCcEEEEEeCCC----ce-eEE
Confidence            4567999999999987776 43  1 1212111233333 2 3456678899999999999988887543    22 333


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +  +++..|+.+..++.+.++|
T Consensus       142 t--~Dg~~L~vSdGs~~l~~iD  161 (268)
T 3nok_A          142 C--YWNGKLVRSDGGTMLTFHE  161 (268)
T ss_dssp             E--EETTEEEEECSSSEEEEEC
T ss_pred             e--cCCCEEEEECCCCEEEEEc
Confidence            3  4567666666677887765

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=97.31  E-value=0.0076  Score=35.10  Aligned_cols=91  Identities=9%  Similarity=-0.052  Sum_probs=54.8

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~   84 (106)
                      ++.|..||.. ++. ..+..+........+.+.+.+..   .++...++.+..||. +++.... .....    ..+..+
T Consensus        77 ~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~d~-~g~~~~~~~~~~~----~~~~~i  146 (299)
T 2z2n_A           77 ANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDI---WFTEMNGNRIGRITD-DGKIREYELPNKG----SYPSFI  146 (299)
T ss_dssp             TTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCE---EEEETTTTEEEEECT-TCCEEEEECSSTT----CCEEEE
T ss_pred             CCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCE---EEEecCCceEEEECC-CCCEEEecCCCCC----CCCceE
Confidence            5667778775 322 22322212223444555555433   566666788999998 5543221 12222    578899


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.+++..+++...++.+..+|
T Consensus       147 ~~~~~g~l~v~~~~~~~i~~~~  168 (299)
T 2z2n_A          147 TLGSDNALWFTENQNNAIGRIT  168 (299)
T ss_dssp             EECTTSCEEEEETTTTEEEEEC
T ss_pred             EEcCCCCEEEEeCCCCEEEEEc
Confidence            9999998888877777777764

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.26  E-value=0.0088  Score=34.83  Aligned_cols=93  Identities=6%  Similarity=-0.105  Sum_probs=55.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|..||.. ++.. .+...........+.+.+.+..   .++...++.|..+|.. ++. ..+.....  ...+..+
T Consensus        39 ~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l---~v~~~~~~~v~~~d~~-g~~-~~~~~~~~--~~~~~~i  109 (300)
T 2qc5_A           39 KANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDI---WFTENGANKIGKLSKK-GGF-TEYPLPQP--DSGPYGI  109 (300)
T ss_dssp             TTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCE---EEEETTTTEEEEECTT-SCE-EEEECSST--TCCEEEE
T ss_pred             CCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCE---EEEecCCCeEEEECCC-CCe-EEecCCCC--CCCCccc
Confidence            35678888877 4432 2222212223344555554443   5666667889999987 543 22221110  1578899


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.+++.++++...++.+..+|
T Consensus       110 ~~~~~g~l~v~~~~~~~i~~~~  131 (300)
T 2qc5_A          110 TEGLNGDIWFTQLNGDRIGKLT  131 (300)
T ss_dssp             EECSTTCEEEEETTTTEEEEEC
T ss_pred             eECCCCCEEEEccCCCeEEEEC
Confidence            9999999888877777777654

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=97.24  E-value=0.0053  Score=36.36  Aligned_cols=89  Identities=9%  Similarity=0.022  Sum_probs=55.7

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .+.|+.+|+++++.+.......   .....-..+.+.. . .+..-.++.+.++|..+.+.+.++....    .. ..  
T Consensus        64 ~S~v~~vD~~Tgkv~~~~~l~~---~~FgeGit~~g~~-l-y~ltw~~~~v~v~D~~t~~~~~ti~~~~----eG-~g--  131 (262)
T 3nol_A           64 RSSIRKVDIESGKTLQQIELGK---RYFGEGISDWKDK-I-VGLTWKNGLGFVWNIRNLRQVRSFNYDG----EG-WG--  131 (262)
T ss_dssp             EEEEEEECTTTCCEEEEEECCT---TCCEEEEEEETTE-E-EEEESSSSEEEEEETTTCCEEEEEECSS----CC-CC--
T ss_pred             CceEEEEECCCCcEEEEEecCC---ccceeEEEEeCCE-E-EEEEeeCCEEEEEECccCcEEEEEECCC----Cc-eE--
Confidence            3589999999999977776632   1212111222333 2 3445567899999999999888887543    11 22  


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++++..++.+..++.+.++|
T Consensus       132 lt~dg~~L~~SdGs~~i~~iD  152 (262)
T 3nol_A          132 LTHNDQYLIMSDGTPVLRFLD  152 (262)
T ss_dssp             EEECSSCEEECCSSSEEEEEC
T ss_pred             EecCCCEEEEECCCCeEEEEc
Confidence            234566655555567777765

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=97.23  E-value=0.0028  Score=39.56  Aligned_cols=90  Identities=7%  Similarity=-0.045  Sum_probs=54.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC--cEEEeeCCCccchhee---cc-ccccCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC--SIRLWNLDNKTCVQEI---TA-HRKKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~--~v~iwd~~~~~~~~~~---~~-~~~~~~   78 (106)
                      .++.|+.||..++........   ..... +.+.+.+..   ++.+..++  .|..++...+.....+   .. ..    
T Consensus       150 ~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~~~~g~~---l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~----  218 (409)
T 3hrp_A          150 DDPRVRLISVDDNKVTTVHPG---FKGGK-PAVTKDKQR---VYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS----  218 (409)
T ss_dssp             TTTEEEEEETTTTEEEEEEET---CCBCB-CEECTTSSE---EEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC----
T ss_pred             CCCcEEEEECCCCEEEEeecc---CCCCc-eeEecCCCc---EEEEecCCCceEEEEEcCCCceeEEeeeccchhc----
Confidence            457888899887665333222   11223 777777765   55555544  7888887655433333   12 22    


Q ss_pred             CCeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .....++++| ++.+++ +..++.|+.||
T Consensus       219 ~~p~~iav~p~~g~lyv-~d~~~~I~~~d  246 (409)
T 3hrp_A          219 GKIGAVALDETEEWLYF-VDSNKNFGRFN  246 (409)
T ss_dssp             SCCCBCEECTTSSEEEE-ECTTCEEEEEE
T ss_pred             CCcEEEEEeCCCCeEEE-EECCCcEEEEE
Confidence            5677889999 555555 66677777664

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=97.18  E-value=0.007  Score=37.38  Aligned_cols=49  Identities=2%  Similarity=-0.060  Sum_probs=39.2

Q ss_pred             CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEec-CCCeEEEcC
Q psy17135         53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAG-ADGLAKVFV  106 (106)
Q Consensus        53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~-~d~~i~iwd  106 (106)
                      .+.|.++|..+++.++.+...     .....+.|+|+++ .++++. .++.+.++|
T Consensus       297 ~~~V~VID~~t~~vv~~i~~g-----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD  347 (373)
T 2mad_H          297 AKEVTSVTGLVGQTSSQISLG-----HDVDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             CCeEEEEECCCCEEEEEEECC-----CCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence            357999999999988888533     4678999999999 677776 588998876

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.17  E-value=0.015  Score=37.18  Aligned_cols=95  Identities=8%  Similarity=0.071  Sum_probs=61.8

Q ss_pred             CceEEEEeCccCceeeecccCCCC-CCCCeeEeeeCCCCceEEEeeC-------------------CCCcEEEeeCCCcc
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELN-SEPPACQTIPSSNISLFDSRPG-------------------HDCSIRLWNLDNKT   65 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~-------------------~d~~v~iwd~~~~~   65 (106)
                      .+.|.+.|.++++.+.+....... .....+-|+|....   +++..                   ...+|.+||+.+++
T Consensus       163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~---mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k  239 (462)
T 2ece_A          163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV---LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK  239 (462)
T ss_dssp             CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE---EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred             CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE---EEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence            378999999999987777643222 22333666787775   55553                   36889999999887


Q ss_pred             chheeccccccCCCCeEEEEE--cCCCCEEEEec------CCCeEEEc
Q psy17135         66 CVQEITAHRKKFDESILDVAF--HPSKPFIASAG------ADGLAKVF  105 (106)
Q Consensus        66 ~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~~------~d~~i~iw  105 (106)
                      .+.++.....  ......+.|  +|+++++..++      .+++|.+|
T Consensus       240 ~~~tI~vg~~--g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~  285 (462)
T 2ece_A          240 RIHSLTLGEE--NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW  285 (462)
T ss_dssp             EEEEEESCTT--EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred             EeeEEecCCC--CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence            7777654310  023445555  99999865555      44566543

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.07  E-value=0.0032  Score=41.95  Aligned_cols=49  Identities=10%  Similarity=0.171  Sum_probs=36.4

Q ss_pred             CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.+..||+.+++.+.++..+.     ......+...+..++.++.|+.++.||
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~-----~~~~g~~~tagglvf~gt~dg~l~a~D  502 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVT-----IFNGGTLSTAGNLVFEGSADGRVIAYA  502 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESS-----SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             ceeEEEEECCCCCeEeEccCCC-----CccCccceECCCEEEEECCCCcEEEEE
Confidence            4779999999999877766543     222234555677888899999999886

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=97.07  E-value=0.0094  Score=35.09  Aligned_cols=91  Identities=14%  Similarity=0.037  Sum_probs=50.3

Q ss_pred             CCCceEEEEeCccCceeeeccc--CCCCCCCCeeEeeeC-CCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDC--PELNSEPPACQTIPS-SNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDE   79 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~   79 (106)
                      ..++.|..||..+++.......  ..+...+..+.+.+. +..   +++.. ...+..||.. ++.... ..........
T Consensus        43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l---~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~  117 (314)
T 1pjx_A           43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQL---FVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQ  117 (314)
T ss_dssp             EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEE---EEEET-TTEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred             CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcE---EEEEC-CCCEEEEeCC-CCEEEEEeccCCCcccc
Confidence            3467899999887775321110  001123445666665 332   34444 3468889987 654322 1111100013


Q ss_pred             CeEEEEEcCCCCEEEEecCC
Q psy17135         80 SILDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d   99 (106)
                      .+..+++.+++.++++...+
T Consensus       118 ~~~~i~~d~~g~l~v~~~~~  137 (314)
T 1pjx_A          118 GCNDCAFDYEGNLWITAPAG  137 (314)
T ss_dssp             CCCEEEECTTSCEEEEECBC
T ss_pred             CCcCEEECCCCCEEEEecCc
Confidence            57889999999988777654

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.05  E-value=0.0035  Score=41.68  Aligned_cols=48  Identities=8%  Similarity=0.102  Sum_probs=35.2

Q ss_pred             CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+..||+.+++.+..+...     .......+...+..++.++.|+.++.||
T Consensus       457 g~l~A~D~~tG~~~W~~~~~-----~~~~~g~~~~~g~~v~~g~~dg~l~a~D  504 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWSVEHV-----SPWNGGTLTTAGNVVFQGTADGRLVAYH  504 (677)
T ss_dssp             EEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             cEEEEEeCCCCcEEeecCCC-----CCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence            67999999999877666533     2334444566677888889999998875

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=97.03  E-value=0.0047  Score=36.56  Aligned_cols=56  Identities=4%  Similarity=-0.088  Sum_probs=40.0

Q ss_pred             eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc-CCCCEE-EEec
Q psy17135         35 CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH-PSKPFI-ASAG   97 (106)
Q Consensus        35 ~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~-~s~~   97 (106)
                      +.+.+.+..   .++....+.|..||..+++.+..+..+.    ..+.+++|. |++..| ++..
T Consensus       204 ~~~d~~G~l---wva~~~~~~v~~~d~~tG~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          204 MCIDAEGKL---WVACYNGGRVIRLDPVTGKRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEEBTTSCE---EEEEETTTEEEEECTTTCCEEEEEECSS----SBEEEEEEESGGGCEEEEEEB
T ss_pred             eEECCCCCE---EEEEcCCCEEEEEcCCCceEEEEEECCC----CCceEEEEeCCCCCEEEEEcC
Confidence            445555533   4565566789999999898888887776    689999998 777654 4443

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=96.97  E-value=0.0056  Score=40.08  Aligned_cols=80  Identities=4%  Similarity=-0.132  Sum_probs=51.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .+|.|..||+.+++.+-+.......   ........+..   ++.++.|+.++.||.++|+.+..+.....   ....-+
T Consensus       464 ~~G~l~A~D~~tG~~~W~~~~~~~~---~~g~~~taggl---vf~g~~dg~l~A~D~~tG~~lW~~~~~~g---~~a~P~  534 (582)
T 1flg_A          464 HVGSLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNL---VFTGTGDGYFKAFDAKSGKELWKFQTGSG---IVSPPI  534 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESSCC---CSCCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             CcceEEEEECCCCCEEEEecCCCCC---cccceEeCCCE---EEEECCCCcEEEEECCCCCEEEEecCCCC---cccCce
Confidence            4799999999999986555442111   11111122333   56688999999999999999887765441   122235


Q ss_pred             EEcCCCCEE
Q psy17135         85 AFHPSKPFI   93 (106)
Q Consensus        85 ~~~~~~~~~   93 (106)
                      .|..+++.+
T Consensus       535 ~y~~~G~qY  543 (582)
T 1flg_A          535 TWEQDGEQY  543 (582)
T ss_dssp             EEEETTEEE
T ss_pred             EEEECCEEE
Confidence            566677654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=96.93  E-value=0.023  Score=33.72  Aligned_cols=93  Identities=4%  Similarity=-0.055  Sum_probs=59.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc-cCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK-KFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~   83 (106)
                      .++.+.++|..+++.+..+...  ....  ....+.+..   +..+..++.+.++|..+.+.++.+..... +.-...+.
T Consensus        84 ~~~~v~viD~~t~~v~~~i~~g--~~~g--~glt~Dg~~---l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne  156 (266)
T 2iwa_A           84 LKNIGFIYDRRTLSNIKNFTHQ--MKDG--WGLATDGKI---LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE  156 (266)
T ss_dssp             TCSEEEEEETTTTEEEEEEECC--SSSC--CEEEECSSS---EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred             cCCEEEEEECCCCcEEEEEECC--CCCe--EEEEECCCE---EEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence            5788999999999887776543  1112  223455555   33444578999999998887777653320 00124667


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.|. ++..++....++.|.+.
T Consensus       157 le~~-dg~lyvn~~~~~~V~vI  177 (266)
T 2iwa_A          157 LEYI-NGEVWANIWQTDCIARI  177 (266)
T ss_dssp             EEEE-TTEEEEEETTSSEEEEE
T ss_pred             EEEE-CCEEEEecCCCCeEEEE
Confidence            7777 67666666666676654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=96.92  E-value=0.021  Score=33.20  Aligned_cols=91  Identities=7%  Similarity=-0.137  Sum_probs=52.8

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~   84 (106)
                      ++.|..+|. +++.. .+...........+.+.+.+..   .++....+.|..++. +++.... +....    ..+..+
T Consensus       166 ~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~l---~v~~~~~~~i~~~~~-~g~~~~~~~~~~~----~~~~~i  235 (300)
T 2qc5_A          166 NNSIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGAL---WFVEIMGNKIGRITT-TGEISEYDIPTPN----ARPHAI  235 (300)
T ss_dssp             TTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSE---EEEETTTTEEEEECT-TCCEEEEECSSTT----CCEEEE
T ss_pred             CCeEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCCE---EEEccCCCEEEEEcC-CCcEEEEECCCCC----CCceEE
Confidence            456777776 44432 2222212222334555554432   455556677999988 4443222 22223    578899


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.+++.++++...++.|..+|
T Consensus       236 ~~d~~g~l~v~~~~~~~i~~~~  257 (300)
T 2qc5_A          236 TAGKNSEIWFTEWGANQIGRIT  257 (300)
T ss_dssp             EECSTTCEEEEETTTTEEEEEC
T ss_pred             EECCCCCEEEeccCCCeEEEEC
Confidence            9999998888777777777664

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=96.79  E-value=0.03  Score=33.09  Aligned_cols=83  Identities=14%  Similarity=0.181  Sum_probs=48.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|..||..+++. ..+..   ...+..+.+.+.+..   +++.  +..|.+||..+++...............+..+
T Consensus        33 ~~~~i~~~d~~~~~~-~~~~~---~~~~~~i~~~~dG~l---~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di  103 (297)
T 3g4e_A           33 PAKKVCRWDSFTKQV-QRVTM---DAPVSSVALRQSGGY---VATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDG  103 (297)
T ss_dssp             TTTEEEEEETTTCCE-EEEEC---SSCEEEEEEBTTSSE---EEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred             CCCEEEEEECCCCcE-EEEeC---CCceEEEEECCCCCE---EEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence            456788888876654 22222   223445667776653   3443  45788999987764322211110011457889


Q ss_pred             EEcCCCCEEEEe
Q psy17135         85 AFHPSKPFIASA   96 (106)
Q Consensus        85 ~~~~~~~~~~s~   96 (106)
                      ++.|+++++++.
T Consensus       104 ~~d~dG~l~~~~  115 (297)
T 3g4e_A          104 KVDPAGRYFAGT  115 (297)
T ss_dssp             EECTTSCEEEEE
T ss_pred             EECCCCCEEEec
Confidence            999999977764

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=96.77  E-value=0.018  Score=34.15  Aligned_cols=66  Identities=6%  Similarity=-0.116  Sum_probs=47.5

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ....|.|.+...  +++...++.+..|+. ++. ...+..+.    ..+..+++.++++++++...++.|..|+
T Consensus        48 egp~~~~~g~~l--~~~d~~~~~i~~~~~-~g~-~~~~~~~~----~~~~gl~~d~dG~l~v~~~~~~~v~~~~  113 (305)
T 3dr2_A           48 EGPAWWEAQRTL--VWSDLVGRRVLGWRE-DGT-VDVLLDAT----AFTNGNAVDAQQRLVHCEHGRRAITRSD  113 (305)
T ss_dssp             EEEEEEGGGTEE--EEEETTTTEEEEEET-TSC-EEEEEESC----SCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             cCCeEeCCCCEE--EEEECCCCEEEEEeC-CCC-EEEEeCCC----CccceeeECCCCCEEEEECCCCEEEEEC
Confidence            446788877743  577888899999988 444 34444444    6788999999999877766667776664

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=96.76  E-value=0.009  Score=38.99  Aligned_cols=82  Identities=4%  Similarity=-0.168  Sum_probs=51.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|..||+.+++.+.+.....   ..........+..   ++.++.|+.+..+|.++++.+..+.....   .....+
T Consensus       442 ~~g~l~a~D~~tG~~~W~~~~~~---~~~~~~~~t~gg~---v~~g~~dg~l~a~D~~tG~~lw~~~~~~~---~~~~p~  512 (571)
T 2ad6_A          442 EMGQIRAFDLTTGKAKWTKWEKF---AAWGGTLYTKGGL---VWYATLDGYLKALDNKDGKELWNFKMPSG---GIGSPM  512 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESS---CCCSBCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             CCCeEEEEECCCCCEEEEecCCC---CccceeEEECCCE---EEEEcCCCeEEEEECCCCCEEEEEeCCCC---cEeeeE
Confidence            46899999999999866654421   1112222233433   45688999999999999998877764431   111223


Q ss_pred             EEcCCCCEEEE
Q psy17135         85 AFHPSKPFIAS   95 (106)
Q Consensus        85 ~~~~~~~~~~s   95 (106)
                      .+..++..++.
T Consensus       513 ~~~~~G~~yv~  523 (571)
T 2ad6_A          513 TYSFKGKQYIG  523 (571)
T ss_dssp             EEEETTEEEEE
T ss_pred             EEEECCEEEEE
Confidence            45566765443

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=96.74  E-value=0.044  Score=34.21  Aligned_cols=97  Identities=5%  Similarity=-0.136  Sum_probs=58.2

Q ss_pred             CceEEEEeCccCceeeecc--cCCCCCCC-C-eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc--c----
Q psy17135          6 SSVIYIWTLLELQTYARND--CPELNSEP-P-ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR--K----   75 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~--~~~~~~~~-~-~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~--~----   75 (106)
                      ++.|+.||..++.......  ........ . .+.+.|.+...  +++-..++.|+.|+....  +..+.++.  .    
T Consensus       239 ~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l--yv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~d  314 (409)
T 3hrp_A          239 NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF--YMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQD  314 (409)
T ss_dssp             TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE--EEEETTTTEEEEECTTCC--EEEEEECTTCCSCBC
T ss_pred             CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE--EEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCC
Confidence            5678888887765422100  11111111 2 67888855442  567777889999987643  22222211  0    


Q ss_pred             -----cCCCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         76 -----KFDESILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        76 -----~~~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                           ..-.....++++|++.++++-. .+++|+.|+
T Consensus       315 g~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~  351 (409)
T 3hrp_A          315 GLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD  351 (409)
T ss_dssp             EEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred             CcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence                 0013477899999999888888 888888774

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.71  E-value=0.011  Score=39.01  Aligned_cols=90  Identities=11%  Similarity=0.013  Sum_probs=62.6

Q ss_pred             ceEEEEeCcc--Cce-eeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------------hheec
Q psy17135          7 SVIYIWTLLE--LQT-YARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------------VQEIT   71 (106)
Q Consensus         7 ~~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------------~~~~~   71 (106)
                      +.|.+.|.++  ++. +......   .....+.+.|++...  ++++..+.+|.++|..+.+.            ..++ 
T Consensus       254 ~~V~VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v--~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-  327 (595)
T 1fwx_A          254 NGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHL--CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-  327 (595)
T ss_dssp             TTEEEEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEE--EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-
T ss_pred             CcEEEEeCcccCCceeEEEEecC---CCceEEEEcCCCCEE--EEeCCCCCeEEEEECcccccccccccCcccceEEEc-
Confidence            3488999987  433 2233321   246778899998885  67788889999999986531            1122 


Q ss_pred             cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                       ..   ..+...++|+|+|..+.+..-|+.|..|+
T Consensus       328 -~v---G~gP~h~aF~~dG~aY~t~~ldsqV~kwd  358 (595)
T 1fwx_A          328 -EL---GLGPLHTAFDGRGNAYTSLFLDSQVVKWN  358 (595)
T ss_dssp             -BC---CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             -CC---CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence             11   15778899999996577888999998885

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=96.70  E-value=0.0099  Score=39.49  Aligned_cols=63  Identities=10%  Similarity=0.122  Sum_probs=44.3

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR   74 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~   74 (106)
                      +|.|..||+.+++.+-+......   .........+..   ++.++.|+.++.||.++++.+..+....
T Consensus       437 ~g~l~A~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~---vf~g~~dg~l~a~d~~tG~~l~~~~~~~  499 (668)
T 1kv9_A          437 SGALLAWDPVKQKAAWKVPYPTH---WNGGTLSTAGNL---VFQGTAAGQMHAYSADKGEALWQFEAQS  499 (668)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cceEEEEeCCCCcEEEEccCCCC---CcCceeEeCCCE---EEEECCcccchhhhhhcChhheEecCCC
Confidence            48999999999998665544211   122223344444   5778999999999999999887776543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=96.61  E-value=0.012  Score=37.26  Aligned_cols=48  Identities=6%  Similarity=0.107  Sum_probs=39.1

Q ss_pred             CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEec-CCCeEEEcC
Q psy17135         54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAG-ADGLAKVFV  106 (106)
Q Consensus        54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~-~d~~i~iwd  106 (106)
                      +.|.++|..+.+.++.+....     ....+.|+|+++ .+++.. .++.|.++|
T Consensus       350 ~~VsVID~~T~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID  399 (426)
T 3c75_H          350 RFVVVLNAETGERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYD  399 (426)
T ss_dssp             EEEEEEETTTCCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             CEEEEEECCCCeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence            579999999999888886443     578899999998 777766 589998876

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=96.61  E-value=0.014  Score=35.53  Aligned_cols=90  Identities=7%  Similarity=-0.083  Sum_probs=53.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE-
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD-   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~-   83 (106)
                      .++.|..+|..+++.+....... ........  ..+..   +..++.++.+.++|..+++.+.......    ..+.. 
T Consensus       285 ~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~--~~~~~---l~v~~~~g~l~~~d~~tG~~~~~~~~~~----~~~~~~  354 (376)
T 3q7m_A          285 QNDRVMALTIDGGVTLWTQSDLL-HRLLTSPV--LYNGN---LVVGDSEGYLHWINVEDGRFVAQQKVDS----SGFQTE  354 (376)
T ss_dssp             TTCCEEEEETTTCCEEEEECTTT-TSCCCCCE--EETTE---EEEECTTSEEEEEETTTCCEEEEEECCT----TCBCSC
T ss_pred             CCCeEEEEECCCCcEEEeecccC-CCcccCCE--EECCE---EEEEeCCCeEEEEECCCCcEEEEEecCC----CcceeC
Confidence            46778889988888755443111 11111111  12333   5778889999999999998776665422    22221 


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...  .+..+..++.+|.+..|+
T Consensus       355 ~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          355 PVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CEE--ETTEEEEEBTTSCEEEEE
T ss_pred             CEE--ECCEEEEEeCCCEEEEEe
Confidence            112  245677778889888764

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=96.59  E-value=0.045  Score=32.54  Aligned_cols=93  Identities=10%  Similarity=-0.002  Sum_probs=59.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~   83 (106)
                      .++.+.+||.++++.+..+...   .....+.  +.+..   |.....+..+.++|..+.+.++.+...... .-..++.
T Consensus       114 ~~~~v~V~D~~Tl~~~~ti~~~---~eGwGLt--~Dg~~---L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe  185 (268)
T 3nok_A          114 TEGLLFTWSGMPPQRERTTRYS---GEGWGLC--YWNGK---LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINE  185 (268)
T ss_dssp             SSCEEEEEETTTTEEEEEEECS---SCCCCEE--EETTE---EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred             cCCEEEEEECCcCcEEEEEeCC---CceeEEe--cCCCE---EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence            4789999999999998877763   1222333  33444   344445788999999998887776543210 0024556


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|. ++..++....+..|.+.|
T Consensus       186 Le~~-dG~lyanvw~s~~I~vID  207 (268)
T 3nok_A          186 LECA-NGVIYANIWHSSDVLEID  207 (268)
T ss_dssp             EEEE-TTEEEEEETTCSEEEEEC
T ss_pred             cEEe-CCEEEEEECCCCeEEEEe
Confidence            6666 666666666666766544

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=96.52  E-value=0.04  Score=33.52  Aligned_cols=65  Identities=6%  Similarity=-0.082  Sum_probs=39.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCC------CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELN------SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      .++.|..+|.++++.+.........      ...........+..   +..++.++.+..+|..+|+.+.....
T Consensus        61 ~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           61 RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGH---VYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTE---EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCE---EEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            4678999999999886555542210      11111111222333   46677789999999999987655543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=96.47  E-value=0.055  Score=32.07  Aligned_cols=93  Identities=10%  Similarity=0.060  Sum_probs=58.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~   83 (106)
                      .++.+.++|.++++.+..+....   ....+.  +.+..   ++....+..+.++|..+.+.++.+...... .-..++.
T Consensus       105 ~~~~v~v~D~~t~~~~~ti~~~~---eG~glt--~dg~~---L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNE  176 (262)
T 3nol_A          105 KNGLGFVWNIRNLRQVRSFNYDG---EGWGLT--HNDQY---LIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNE  176 (262)
T ss_dssp             SSSEEEEEETTTCCEEEEEECSS---CCCCEE--ECSSC---EEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEE
T ss_pred             eCCEEEEEECccCcEEEEEECCC---CceEEe--cCCCE---EEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccce
Confidence            47889999999999988777632   222232  44444   344444678999999998877776543210 0034455


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.|. ++..++....+..|.+.|
T Consensus       177 Le~~-~G~lyan~w~~~~I~vID  198 (262)
T 3nol_A          177 LEWV-DGEIFANVWQTNKIVRID  198 (262)
T ss_dssp             EEEE-TTEEEEEETTSSEEEEEC
T ss_pred             eEEE-CCEEEEEEccCCeEEEEE
Confidence            6665 666666666666766544

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.46  E-value=0.063  Score=34.49  Aligned_cols=84  Identities=8%  Similarity=0.166  Sum_probs=60.0

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..+++|+|+.+.+.+..+...   ..+.-..|......+  ++|..   .|..|++.. ..+.+.+.-|.......|...
T Consensus        85 g~~lQiFnle~K~klks~~~~---e~VvfWkWis~~~l~--lVT~t---aVyHWsi~~~s~P~kvFdR~~~L~~~QIInY  156 (494)
T 1bpo_A           85 GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLNTVA--LVTDN---AVYHWSMEGESQPVKMFDRHSSLAGCQIINY  156 (494)
T ss_dssp             TTEEEEEETTTTEEEEEEECS---SCCCEEEEEETTEEE--EECSS---EEEEEESSSSCCCEEEEECCGGGTTCEEEEE
T ss_pred             CCeEEEEchHHhhhhcceecC---CCceEEEecCCCeEE--EEcCC---eeEEecccCCCCchhheecchhcccceEEEE
Confidence            467999999998887777773   357788898887775  55544   699999975 345666665554333567777


Q ss_pred             EEcCCCCEEEEec
Q psy17135         85 AFHPSKPFIASAG   97 (106)
Q Consensus        85 ~~~~~~~~~~s~~   97 (106)
                      ..+++.+|++-.+
T Consensus       157 ~~d~~~kW~~l~G  169 (494)
T 1bpo_A          157 RTDAKQKWLLLTG  169 (494)
T ss_dssp             EECTTSSEEEEEE
T ss_pred             EECCCCCeEEEEe
Confidence            7788999875443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=96.41  E-value=0.065  Score=32.20  Aligned_cols=69  Identities=9%  Similarity=0.000  Sum_probs=43.9

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCC--Cc-cch--hee---ccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLD--NK-TCV--QEI---TAHRKKFDESILDVAFHPSKPFIASAGADGLAK  103 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~--~~-~~~--~~~---~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~  103 (106)
                      ...+.|.|.+...  +++...++.|.+|++.  ++ ...  ..+   ....    .....+.+.+++.++++...++.|.
T Consensus       181 ~~~i~~s~dg~~l--yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~----~~p~gi~~d~~G~lwva~~~~~~v~  254 (326)
T 2ghs_A          181 PNSICFSPDGTTG--YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIK----GGMDGSVCDAEGHIWNARWGEGAVD  254 (326)
T ss_dssp             EEEEEECTTSCEE--EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSS----SEEEEEEECTTSCEEEEEETTTEEE
T ss_pred             cCCeEEcCCCCEE--EEEECCCCEEEEEEcccccCCcccCceEEEECCCCC----CCCCeeEECCCCCEEEEEeCCCEEE
Confidence            3456778777652  3556667889999986  55 321  112   1122    3566788888888877776667777


Q ss_pred             EcC
Q psy17135        104 VFV  106 (106)
Q Consensus       104 iwd  106 (106)
                      .|+
T Consensus       255 ~~d  257 (326)
T 2ghs_A          255 RYD  257 (326)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            764

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=96.30  E-value=0.037  Score=37.00  Aligned_cols=92  Identities=9%  Similarity=-0.010  Sum_probs=50.8

Q ss_pred             CceEEEEeCccCceee--ecccCCCCCCCCeeEeeeCCCCceEEEeeC-----CCCcEEEeeCCCc--cchheecccccc
Q psy17135          6 SSVIYIWTLLELQTYA--RNDCPELNSEPPACQTIPSSNISLFDSRPG-----HDCSIRLWNLDNK--TCVQEITAHRKK   76 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-----~d~~v~iwd~~~~--~~~~~~~~~~~~   76 (106)
                      ...|.+|++.+++...  .+....+........|+|++...   +..+     ....+.+||+.++  ++...+..+.  
T Consensus       242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l---~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--  316 (741)
T 1yr2_A          242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWV---VITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL--  316 (741)
T ss_dssp             CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE---EEEEECTTCSCCEEEEEEEETTEECCCEEEECSS--
T ss_pred             CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEE---EEEEEccCCCcceEEEEECCCCCCcccEEecCCC--
Confidence            3468899997765311  22221111224567888888773   3332     2347999999876  3245555554  


Q ss_pred             CCCCeEEEEEcCCCCEEEEecC----CCeEEEc
Q psy17135         77 FDESILDVAFHPSKPFIASAGA----DGLAKVF  105 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~----d~~i~iw  105 (106)
                        ...... ++|++..++..+.    ++.+.+|
T Consensus       317 --~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~  346 (741)
T 1yr2_A          317 --KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRV  346 (741)
T ss_dssp             --SSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred             --CceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence              333433 3477777655543    2346555

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=96.28  E-value=0.03  Score=36.93  Aligned_cols=79  Identities=4%  Similarity=-0.144  Sum_probs=49.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .+|.|..||+.+++.+-.......   .........+..   ++.++.|+.++.+|.++|+.+..+.....   ....-+
T Consensus       451 ~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagg~---vf~gt~dg~l~A~D~~tG~~lW~~~l~~g---~~~~P~  521 (599)
T 1w6s_A          451 GLGQIKAYNAITGDYKWEKMERFA---VWGGTMATAGDL---VFYGTLDGYLKARDSDTGDLLWKFKIPSG---AIGYPM  521 (599)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             CcCeEEEEECCCCCEEeEecCCCC---ccCcceEecCCE---EEEECCCCeEEEEECCCCCEEEEeeCCCC---cEeccE
Confidence            468999999999998655543211   111111122333   45688999999999999998877764431   222334


Q ss_pred             EEcCCCCE
Q psy17135         85 AFHPSKPF   92 (106)
Q Consensus        85 ~~~~~~~~   92 (106)
                      .|..+++.
T Consensus       522 ~y~~~G~q  529 (599)
T 1w6s_A          522 TYTHKGTQ  529 (599)
T ss_dssp             EEEETTEE
T ss_pred             EEEeCCEE
Confidence            55566764

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.22  E-value=0.046  Score=36.13  Aligned_cols=92  Identities=7%  Similarity=-0.017  Sum_probs=56.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC------------------------------
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD------------------------------   53 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d------------------------------   53 (106)
                      ..++.+.+.|..+.+.........   ..-.+...|.+..   +++.+.+                              
T Consensus       172 ~~~~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~---~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v  245 (595)
T 1fwx_A          172 NYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKW---AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI  245 (595)
T ss_dssp             GEEEEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSE---EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred             ccCceEEEEECCCCeEEEEEEeCC---CccceEECCCCCE---EEEEecCcccCcchhhccccccceEEEeeccceeEec
Confidence            346789999999988766555421   2334555666555   3333322                              


Q ss_pred             --------CcEEEeeCCC--ccc-hheeccccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         54 --------CSIRLWNLDN--KTC-VQEITAHRKKFDESILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        54 --------~~v~iwd~~~--~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                              +.|.+.|..+  ++. ++.+...     ....++.++|||+++ +++..+.++.++|
T Consensus       246 ~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~~s~~VsVid  305 (595)
T 1fwx_A          246 AAGDYQELNGVKVVDGRKEASSLFTRYIPIA-----NNPHGCNMAPDKKHLCVAGKLSPTVTVLD  305 (595)
T ss_dssp             HHTCSEEETTEEEEECSGGGCCSSEEEEEEE-----SSCCCEEECTTSSEEEEECTTSSBEEEEE
T ss_pred             cCCCeeEECcEEEEeCcccCCceeEEEEecC-----CCceEEEEcCCCCEEEEeCCCCCeEEEEE
Confidence                    2367777766  333 3444432     355778999999985 5555667777764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=96.11  E-value=0.013  Score=36.38  Aligned_cols=63  Identities=6%  Similarity=-0.063  Sum_probs=47.9

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-CCCcEEEeeCCCccchheecccc
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-HDCSIRLWNLDNKTCVQEITAHR   74 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~~~~~~~~~~~~   74 (106)
                      +.+.++|+.+++.+..+...   .....+.+.|.+...  +++.. .++.|.++|+.+++.++.+....
T Consensus       294 ~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l--~va~~~~~~~VsVID~~t~kvv~~I~vg~  357 (368)
T 1mda_H          294 ENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASD--NYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCE--EEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             CCEEEEECCCCeEEEEEECC---CCcceEEECCCCCEE--EEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence            34669999999987776653   246678888888753  45666 58999999999999888887553

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=96.05  E-value=0.11  Score=31.24  Aligned_cols=48  Identities=6%  Similarity=0.084  Sum_probs=32.3

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc-CCCCEE-EEecCC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH-PSKPFI-ASAGAD   99 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~-~s~~~d   99 (106)
                      .++...++.|..|+. +++.+..+..+.    ..+.+++|. |++..+ ++...+
T Consensus       244 wva~~~~~~v~~~d~-~g~~~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~  293 (326)
T 2ghs_A          244 WNARWGEGAVDRYDT-DGNHIARYEVPG----KQTTCPAFIGPDASRLLVTSARE  293 (326)
T ss_dssp             EEEEETTTEEEEECT-TCCEEEEEECSC----SBEEEEEEESTTSCEEEEEEBCT
T ss_pred             EEEEeCCCEEEEECC-CCCEEEEEECCC----CCcEEEEEecCCCCEEEEEecCC
Confidence            345444578999998 566666666555    678999998 887654 444433

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=95.99  E-value=0.037  Score=33.47  Aligned_cols=28  Identities=7%  Similarity=-0.015  Sum_probs=22.9

Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .....+++.+++.++++...++.|..||
T Consensus       248 g~pdgia~d~~G~l~va~~~~~~V~~~d  275 (343)
T 2qe8_A          248 PICDGISIDKDHNIYVGDLAHSAIGVIT  275 (343)
T ss_dssp             CSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred             CCCceEEECCCCCEEEEccCCCeEEEEE
Confidence            3455688999999999988889998885

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=95.66  E-value=0.16  Score=30.10  Aligned_cols=82  Identities=7%  Similarity=-0.095  Sum_probs=45.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc-cccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH-RKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~   83 (106)
                      .++.|..|+. +++. ..+..  .......+.+.+.+..   +++...++.|..|+.. ++. ..+... .......+..
T Consensus        65 ~~~~i~~~~~-~g~~-~~~~~--~~~~~~gl~~d~dG~l---~v~~~~~~~v~~~~~~-g~~-~~~~~~~~~~~~~~~~~  135 (305)
T 3dr2_A           65 VGRRVLGWRE-DGTV-DVLLD--ATAFTNGNAVDAQQRL---VHCEHGRRAITRSDAD-GQA-HLLVGRYAGKRLNSPND  135 (305)
T ss_dssp             TTTEEEEEET-TSCE-EEEEE--SCSCEEEEEECTTSCE---EEEETTTTEEEEECTT-SCE-EEEECEETTEECSCCCC
T ss_pred             CCCEEEEEeC-CCCE-EEEeC--CCCccceeeECCCCCE---EEEECCCCEEEEECCC-CCE-EEEEeccCCCccCCCCC
Confidence            4567777777 3332 22222  1223445666666553   4555556789999886 542 222111 1000135677


Q ss_pred             EEEcCCCCEEEE
Q psy17135         84 VAFHPSKPFIAS   95 (106)
Q Consensus        84 ~~~~~~~~~~~s   95 (106)
                      +.+.|++.++++
T Consensus       136 i~~d~dG~l~~t  147 (305)
T 3dr2_A          136 LIVARDGAIWFT  147 (305)
T ss_dssp             EEECTTSCEEEE
T ss_pred             EEECCCCCEEEe
Confidence            899999998886

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=95.60  E-value=0.16  Score=29.95  Aligned_cols=80  Identities=8%  Similarity=-0.125  Sum_probs=42.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|..+|.. ++........  ..........+ ...   +..++.++.+..+|.. ++....+....    ..+..+
T Consensus       115 ~~~~l~~~d~~-g~~~~~~~~~--~~~~~~~~~~~-~g~---l~vgt~~~~l~~~d~~-g~~~~~~~~~~----~~~~~~  182 (330)
T 3hxj_A          115 MDGHLYAINTD-GTEKWRFKTK--KAIYATPIVSE-DGT---IYVGSNDNYLYAINPD-GTEKWRFKTND----AITSAA  182 (330)
T ss_dssp             TTSEEEEECTT-SCEEEEEECS--SCCCSCCEECT-TSC---EEEECTTSEEEEECTT-SCEEEEEECSS----CCCSCC
T ss_pred             cCCEEEEEcCC-CCEEEEEcCC--CceeeeeEEcC-CCE---EEEEcCCCEEEEECCC-CCEeEEEecCC----Cceeee
Confidence            35778888887 6654443332  11122222222 333   4567777888889887 66554444333    344455


Q ss_pred             EEcCCCCEEEEe
Q psy17135         85 AFHPSKPFIASA   96 (106)
Q Consensus        85 ~~~~~~~~~~s~   96 (106)
                      ...+++.+++..
T Consensus       183 ~~d~~g~l~v~t  194 (330)
T 3hxj_A          183 SIGKDGTIYFGS  194 (330)
T ss_dssp             EECTTCCEEEES
T ss_pred             EEcCCCEEEEEe
Confidence            555555544443

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=95.57  E-value=0.23  Score=33.06  Aligned_cols=89  Identities=9%  Similarity=0.075  Sum_probs=49.6

Q ss_pred             ceEEEEeCccCc-eeeecccCCCCCCCCeeEeeeCCCCceEEEeeCC---CCcEEEeeCCCccc--hheeccccccCCCC
Q psy17135          7 SVIYIWTLLELQ-TYARNDCPELNSEPPACQTIPSSNISLFDSRPGH---DCSIRLWNLDNKTC--VQEITAHRKKFDES   80 (106)
Q Consensus         7 ~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~v~iwd~~~~~~--~~~~~~~~~~~~~~   80 (106)
                      +.|.++|+.++. ....+...  .. .....+.+.+...  ++....   .+.|..+|+.++..  ...+..+.    ..
T Consensus       259 ~~i~~~d~~~~~~~~~~l~~~--~~-~~~~~~~~~g~~l--~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----~~  329 (693)
T 3iuj_A          259 NRLYVKDLSQENAPLLTVQGD--LD-ADVSLVDNKGSTL--YLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER----QQ  329 (693)
T ss_dssp             CEEEEEETTSTTCCCEEEECS--SS-SCEEEEEEETTEE--EEEECTTCTTCEEEEEETTSCCGGGCEEEECCC----SS
T ss_pred             cEEEEEECCCCCCceEEEeCC--CC-ceEEEEeccCCEE--EEEECCCCCCCEEEEEeCCCCCccccEEEecCC----CC
Confidence            578888887663 22233221  11 2222255656553  334433   36788899987654  34555555    44


Q ss_pred             eEEEEEcCCCCEEEEec-CCC--eEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAG-ADG--LAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~-~d~--~i~iwd  106 (106)
                      +.  .|++++..|+... .++  .+++|+
T Consensus       330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d  356 (693)
T 3iuj_A          330 VL--TVHSGSGYLFAEYMVDATARVEQFD  356 (693)
T ss_dssp             CE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred             EE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence            44  8888888766555 344  455553

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=95.32  E-value=0.21  Score=29.32  Aligned_cols=92  Identities=14%  Similarity=0.074  Sum_probs=56.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~   83 (106)
                      .++.+.+||.++++.+..+....   ....+.  +.+..   |.....+..+.++|..+.+.++.+...... .-..++.
T Consensus        83 ~~~~v~v~D~~tl~~~~ti~~~~---~Gwglt--~dg~~---L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe  154 (243)
T 3mbr_X           83 RNHEGFVYDLATLTPRARFRYPG---EGWALT--SDDSH---LYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE  154 (243)
T ss_dssp             SSSEEEEEETTTTEEEEEEECSS---CCCEEE--ECSSC---EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred             eCCEEEEEECCcCcEEEEEeCCC---CceEEe--eCCCE---EEEECCCCeEEEEeCCCCeEEEEEEEccCCccccccee
Confidence            47889999999999988777642   223333  34444   333344778999999998877776543210 0024455


Q ss_pred             EEEcCCCCEEEEecCCCeEEEc
Q psy17135         84 VAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      +.+. ++..++....+..|.+.
T Consensus       155 Le~~-~G~lyanvw~s~~I~vI  175 (243)
T 3mbr_X          155 LEWV-NGELLANVWLTSRIARI  175 (243)
T ss_dssp             EEEE-TTEEEEEETTTTEEEEE
T ss_pred             eEEe-CCEEEEEECCCCeEEEE
Confidence            5555 56666655555555544

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=95.14  E-value=0.36  Score=31.06  Aligned_cols=94  Identities=12%  Similarity=0.034  Sum_probs=51.7

Q ss_pred             eEEEEeCcc-----CceeeecccCCCCCCCCeeEe-----------e--eCCCCceEEEeeCCCCcEEEeeCCCc----c
Q psy17135          8 VIYIWTLLE-----LQTYARNDCPELNSEPPACQT-----------I--PSSNISLFDSRPGHDCSIRLWNLDNK----T   65 (106)
Q Consensus         8 ~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~s~~~d~~v~iwd~~~~----~   65 (106)
                      .|.+-|+..     ++.+.+...+....+..-.-|           .  +....  +++++-.+..|.++|..+.    +
T Consensus        44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~--l~v~~l~s~~I~viD~~t~p~~p~  121 (462)
T 2ece_A           44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRF--LIVPGLRSSRIYIIDTKPNPREPK  121 (462)
T ss_dssp             EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCE--EEEEBTTTCCEEEEECCSCTTSCE
T ss_pred             eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCE--EEEccCCCCeEEEEECCCCCCCce
Confidence            466777775     666666555432212222223           2  22333  3678888899999998744    3


Q ss_pred             chheecc-----ccccCCCCeEEEEEcCCCCEEEEecCC------CeEEEcC
Q psy17135         66 CVQEITA-----HRKKFDESILDVAFHPSKPFIASAGAD------GLAKVFV  106 (106)
Q Consensus        66 ~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~i~iwd  106 (106)
                      ..+.+..     ...  ...-..+...|++ +++++..+      +.+.+.|
T Consensus       122 ~~k~ie~~~~~~~~g--~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD  170 (462)
T 2ece_A          122 IIKVIEPEEVKKVSG--YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD  170 (462)
T ss_dssp             EEEEECHHHHHHHHC--EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred             eeeeechhhcccccC--CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence            3444421     010  0234556788999 66665554      5566554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=95.12  E-value=0.17  Score=34.13  Aligned_cols=81  Identities=9%  Similarity=-0.096  Sum_probs=45.4

Q ss_pred             ceEEEEeCccC-ceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC-----CcEEEeeCCCccchhe--eccccccCC
Q psy17135          7 SVIYIWTLLEL-QTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD-----CSIRLWNLDNKTCVQE--ITAHRKKFD   78 (106)
Q Consensus         7 ~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~~~   78 (106)
                      .+|+++|+.++ +.+.. ..   ........|+|++...   +-...+     ..|..+++.+++....  +.....   
T Consensus       201 ~~l~v~dl~~g~~~l~~-~~---~~~~~~~~WspDg~~l---~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~---  270 (751)
T 2xe4_A          201 YTIEFKRISDPSQTIAD-KV---SGTNGEIVWGPDHTSL---FYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP---  270 (751)
T ss_dssp             EEEEEEETTCTTCCCCC-CE---EEECSCCEECSSTTEE---EEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT---
T ss_pred             EEEEEEECCCCCEeCCc-cc---cCceeeEEEecCCCEE---EEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC---
Confidence            35888898887 53211 11   1113457799988763   222222     2577778876643222  221110   


Q ss_pred             CCeEEEEEcCCCCEEEEec
Q psy17135         79 ESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~   97 (106)
                      .....+.|+||+++|+..+
T Consensus       271 ~~~~~~~~SpDg~~l~~~~  289 (751)
T 2xe4_A          271 LFSAFMYKAADTNTLCIGS  289 (751)
T ss_dssp             TCEEEEEECTTSSEEEEEE
T ss_pred             ceEEEEEECCCCCEEEEEe
Confidence            3456778999999865444

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=94.66  E-value=0.19  Score=32.98  Aligned_cols=49  Identities=18%  Similarity=0.175  Sum_probs=30.8

Q ss_pred             CCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         53 DCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        53 d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.+..||+.+++.+-......     ....-.....+..++.++.|+.++.+|
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~-----~~~~g~~~tagglvf~g~~dg~l~A~D  513 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHL-----PLWAGVLATAGNLVFTGTGDGYFKAFD  513 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-----CCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred             cceEEEEECCCCCEEEEecCCC-----CCcccceEeCCCEEEEECCCCcEEEEE
Confidence            5789999999998776554332     111111112355677788888888765

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=94.55  E-value=0.35  Score=31.69  Aligned_cols=50  Identities=14%  Similarity=0.047  Sum_probs=31.2

Q ss_pred             CCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         52 HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        52 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++.+..||..+++.+..+....     .+....+...+..++.++.|+.++.+|
T Consensus       442 ~~g~l~a~D~~tG~~~W~~~~~~-----~~~~~~~~t~gg~v~~g~~dg~l~a~D  491 (571)
T 2ad6_A          442 EMGQIRAFDLTTGKAKWTKWEKF-----AAWGGTLYTKGGLVWYATLDGYLKALD  491 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESS-----CCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred             CCCeEEEEECCCCCEEEEecCCC-----CccceeEEECCCEEEEEcCCCeEEEEE
Confidence            45789999999998776654332     122222222345666678888888765

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=94.38  E-value=0.7  Score=30.88  Aligned_cols=52  Identities=13%  Similarity=0.080  Sum_probs=29.8

Q ss_pred             cEEEeeCCCccchheeccccc-cC----CCCeEEEEEcCCCC---EEEEecCCCeEEEcC
Q psy17135         55 SIRLWNLDNKTCVQEITAHRK-KF----DESILDVAFHPSKP---FIASAGADGLAKVFV  106 (106)
Q Consensus        55 ~v~iwd~~~~~~~~~~~~~~~-~~----~~~v~~~~~~~~~~---~~~s~~~d~~i~iwd  106 (106)
                      .|..+|.++|+.+..++.... ..    ........+..++.   .++.++.+|.++++|
T Consensus       271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD  330 (668)
T 1kv9_A          271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLD  330 (668)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred             eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEE
Confidence            488999999987766653210 00    01222222333554   577788888877764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.97  E-value=0.73  Score=29.56  Aligned_cols=97  Identities=15%  Similarity=0.157  Sum_probs=58.9

Q ss_pred             CceEEEEeCccCceeeecccCC--CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc------------hheec
Q psy17135          6 SSVIYIWTLLELQTYARNDCPE--LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC------------VQEIT   71 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~------------~~~~~   71 (106)
                      ++.||+-++......+.+..+.  ....+..+..+|.+..   ++..+ +..|.+..+..+..            .+.+.
T Consensus        40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~l---LAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~  115 (452)
T 3pbp_A           40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDL---LCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYS  115 (452)
T ss_dssp             TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSE---EEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEE
T ss_pred             CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCE---EEEec-CCeEEEEEecCccccCcccccccccceeEEE
Confidence            5677877777444333444431  2224556777887776   55554 45788888773320            01121


Q ss_pred             cccc--cCCCCeEEEEEcC---CCCEEEEecCCCeEEEcC
Q psy17135         72 AHRK--KFDESILDVAFHP---SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~--~~~~~v~~~~~~~---~~~~~~s~~~d~~i~iwd  106 (106)
                      -.+.  .....|..+.|||   .+..++.--.|+.|++||
T Consensus       116 l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yD  155 (452)
T 3pbp_A          116 IDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFD  155 (452)
T ss_dssp             GGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEE
T ss_pred             cCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEE
Confidence            1110  0126799999999   455788889999999996

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.74  E-value=0.51  Score=30.27  Aligned_cols=73  Identities=14%  Similarity=0.047  Sum_probs=48.2

Q ss_pred             CCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc--chheeccccc-----cCCCCeEEEEEcCCCCEEEE--ecCCC
Q psy17135         30 SEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT--CVQEITAHRK-----KFDESILDVAFHPSKPFIAS--AGADG  100 (106)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~--~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~s--~~~d~  100 (106)
                      ..+..+.|+|.+..+..+++-..|+.|++||+....  +. .+.....     .....+.+++|..++-.|..  ..++|
T Consensus       125 s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~G  203 (452)
T 3pbp_A          125 SSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGG  203 (452)
T ss_dssp             CCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSC
T ss_pred             CceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCC
Confidence            456779999998876567888899999999998632  22 2221110     01156788899886654444  55777


Q ss_pred             eEE
Q psy17135        101 LAK  103 (106)
Q Consensus       101 ~i~  103 (106)
                      .|+
T Consensus       204 DIY  206 (452)
T 3pbp_A          204 DIF  206 (452)
T ss_dssp             EEE
T ss_pred             CEE
Confidence            765

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=93.71  E-value=0.72  Score=30.60  Aligned_cols=84  Identities=10%  Similarity=0.035  Sum_probs=43.9

Q ss_pred             eEEEEeCccCceeeecccCCCCCCC-CeeEeeeCCCCceEEEeeC-CCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEP-PACQTIPSSNISLFDSRPG-HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .+.+||..+++.......+...... ....+...+..   ++.|+ .+..+.+||..+.+-...-.-+..   ..-..+.
T Consensus       220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~l---yv~GG~~~~~v~~yd~~t~~W~~~~~~~~~---R~~~s~~  293 (656)
T 1k3i_A          220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQI---VVTGGNDAKKTSLYDSSSDSWIPGPDMQVA---RGYQSSA  293 (656)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCE---EEECSSSTTCEEEEEGGGTEEEECCCCSSC---CSSCEEE
T ss_pred             EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCE---EEeCCCCCCceEEecCcCCceeECCCCCcc---ccccceE
Confidence            6788888877653222221111111 12334444444   56666 456799999876642211111111   1123445


Q ss_pred             EcCCCCEEEEec
Q psy17135         86 FHPSKPFIASAG   97 (106)
Q Consensus        86 ~~~~~~~~~s~~   97 (106)
                      ..+++++++.|+
T Consensus       294 ~~~dg~iyv~GG  305 (656)
T 1k3i_A          294 TMSDGRVFTIGG  305 (656)
T ss_dssp             ECTTSCEEEECC
T ss_pred             EecCCeEEEEeC
Confidence            566888888888

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=92.90  E-value=0.43  Score=35.27  Aligned_cols=84  Identities=8%  Similarity=0.168  Sum_probs=56.3

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccchheeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      ..+++|+|+.+.+.+..+..   +..++-..|......+  ++|..   .|..|++.. ..+.+.+.-|.......|...
T Consensus        85 g~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~~l~--lVT~~---aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY  156 (1630)
T 1xi4_A           85 GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLNTVA--LVTDN---AVYHWSMEGESQPVKMFDRHSSLAGCQIINY  156 (1630)
T ss_pred             CCeEEEeehHHhhhhccccc---CCCceEEEecCCCeeE--EEcCC---eEEEeccCCCCccHHHHhcchhcccCeeEEe
Confidence            46788889888776666665   3346678888877765  55554   699999974 355666655543223567777


Q ss_pred             EEcCCCCEEEEec
Q psy17135         85 AFHPSKPFIASAG   97 (106)
Q Consensus        85 ~~~~~~~~~~s~~   97 (106)
                      ..+++.+|++-.|
T Consensus       157 ~~d~~~kW~~l~g  169 (1630)
T 1xi4_A          157 RTDAKQKWLLLTG  169 (1630)
T ss_pred             eeCCCCCeEEEEe
Confidence            7788888865433

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=92.55  E-value=0.86  Score=26.29  Aligned_cols=91  Identities=7%  Similarity=-0.129  Sum_probs=46.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~   83 (106)
                      ..+.|..+|+...........  .......+.+.+.+...  +++-...+.|.+++++... ...+. ...    .....
T Consensus        56 ~~~~I~~~~~~g~~~~~~~~~--~~~~p~~ia~d~~~~~l--yv~d~~~~~I~~~~~~g~~-~~~~~~~~~----~~P~~  126 (267)
T 1npe_A           56 SEPSIGRASLHGGEPTTIIRQ--DLGSPEGIALDHLGRTI--FWTDSQLDRIEVAKMDGTQ-RRVLFDTGL----VNPRG  126 (267)
T ss_dssp             TTTEEEEEESSSCCCEEEECT--TCCCEEEEEEETTTTEE--EEEETTTTEEEEEETTSCS-CEEEECSSC----SSEEE
T ss_pred             CCCEEEEEecCCCCcEEEEEC--CCCCccEEEEEecCCeE--EEEECCCCEEEEEEcCCCC-EEEEEECCC----CCccE
Confidence            345677777655432111111  11234446666654442  4566667789888886432 22222 121    45678


Q ss_pred             EEEcCCCC-EEEEecC--CCeEEE
Q psy17135         84 VAFHPSKP-FIASAGA--DGLAKV  104 (106)
Q Consensus        84 ~~~~~~~~-~~~s~~~--d~~i~i  104 (106)
                      +++.|++. .+++...  .+.|..
T Consensus       127 i~vd~~~g~lyv~~~~~~~~~I~~  150 (267)
T 1npe_A          127 IVTDPVRGNLYWTDWNRDNPKIET  150 (267)
T ss_dssp             EEEETTTTEEEEEECCSSSCEEEE
T ss_pred             EEEeeCCCEEEEEECCCCCcEEEE
Confidence            89999544 4444433  345543

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=91.74  E-value=1.2  Score=26.19  Aligned_cols=85  Identities=11%  Similarity=-0.069  Sum_probs=43.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.|..+|.. ++.+......  ..........+.+ .   +..++  +.+..+| .+++.........    ..+.++
T Consensus       155 ~~~~l~~~d~~-g~~~~~~~~~--~~~~~~~~~d~~g-~---l~v~t--~~l~~~d-~~g~~~~~~~~~~----~~~~~~  220 (330)
T 3hxj_A          155 NDNYLYAINPD-GTEKWRFKTN--DAITSAASIGKDG-T---IYFGS--DKVYAIN-PDGTEKWNFYAGY----WTVTRP  220 (330)
T ss_dssp             TTSEEEEECTT-SCEEEEEECS--SCCCSCCEECTTC-C---EEEES--SSEEEEC-TTSCEEEEECCSS----CCCSCC
T ss_pred             CCCEEEEECCC-CCEeEEEecC--CCceeeeEEcCCC-E---EEEEe--CEEEEEC-CCCcEEEEEccCC----cceece
Confidence            35778888887 6664444432  2222223222222 2   23344  6788888 6666554444333    445566


Q ss_pred             EEcCCCCEEEEecCCCeEEE
Q psy17135         85 AFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~i  104 (106)
                      ...+++.+.+.. .++.+..
T Consensus       221 ~~~~~g~l~v~t-~~~gl~~  239 (330)
T 3hxj_A          221 AISEDGTIYVTS-LDGHLYA  239 (330)
T ss_dssp             EECTTSCEEEEE-TTTEEEE
T ss_pred             EECCCCeEEEEc-CCCeEEE
Confidence            666666544433 3444443

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=91.67  E-value=0.47  Score=29.22  Aligned_cols=98  Identities=11%  Similarity=0.007  Sum_probs=53.4

Q ss_pred             CCceEEEEeCc---cCceeeecccCCC-----------CCCCCeeEeeeCCCCceEEEeeCCC-CcEEEeeCCCccchhe
Q psy17135          5 PSSVIYIWTLL---ELQTYARNDCPEL-----------NSEPPACQTIPSSNISLFDSRPGHD-CSIRLWNLDNKTCVQE   69 (106)
Q Consensus         5 ~d~~i~iwd~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~~~~~~~~   69 (106)
                      .+..|..+|+.   +++.+....+...           ......+...+.++.   .++++.. +.|...+.+.. .+..
T Consensus        98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna---YVt~s~~~~~I~rV~pdG~-~~~~  173 (334)
T 2p9w_A           98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS---YVAFALGMPAIARVSADGK-TVST  173 (334)
T ss_dssp             SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE---EEEEEESSCEEEEECTTSC-CEEE
T ss_pred             CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE---EEeCCCCCCeEEEEeCCCC-EEee
Confidence            46778889988   7776544432110           011223444444443   5666666 66666655433 2222


Q ss_pred             ecccc--ccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         70 ITAHR--KKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        70 ~~~~~--~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +....  .......+.++++|++..|+....++.+..+|
T Consensus       174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD  212 (334)
T 2p9w_A          174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD  212 (334)
T ss_dssp             EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred             eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence            21111  00114577899999998877776687776543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=91.35  E-value=1.4  Score=26.34  Aligned_cols=91  Identities=14%  Similarity=-0.084  Sum_probs=49.1

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---cchhe-eccccccCCCCe
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---TCVQE-ITAHRKKFDESI   81 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---~~~~~-~~~~~~~~~~~v   81 (106)
                      ...|+..|+.+.+.......   ......+.|.+.+...  +++-...+.|..+++...   ..... +....    ...
T Consensus         9 ~~~I~~i~~~~~~~~~~~~~---~~~p~g~~~d~~~~~l--y~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~----~~p   79 (316)
T 1ijq_A            9 RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRI--YWSDLSQRMICSTQLDRAHGVSSYDTVISRDI----QAP   79 (316)
T ss_dssp             BSSEEEEETTSCCCEEEECS---CSSEEEEEEETTTTEE--EEEETTTTEEEEEEC--------CEEEECSSC----SCC
T ss_pred             CCeEEEEECCCcceEehhcC---CCceEEEEEEeCCCEE--EEEECCCCcEEEEECCCCCCCcccEEEEeCCC----CCc
Confidence            45688889887664333222   2235567777765553  466667788998988751   22222 22121    344


Q ss_pred             EEEEEcC-CCCEEEEecCCCeEEEc
Q psy17135         82 LDVAFHP-SKPFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~-~~~~~~s~~~d~~i~iw  105 (106)
                      ..+++.+ .+.++++-...+.|.+.
T Consensus        80 ~glavd~~~~~ly~~d~~~~~I~~~  104 (316)
T 1ijq_A           80 DGLAVDWIHSNIYWTDSVLGTVSVA  104 (316)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CEEEEeecCCeEEEEECCCCEEEEE
Confidence            6677775 44455555555555543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=90.90  E-value=2  Score=27.11  Aligned_cols=68  Identities=10%  Similarity=0.029  Sum_probs=40.0

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEEc
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKVF  105 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iw  105 (106)
                      ..+.+.|.....  +++-..++.|..++..++...........   .....++|+|+++ .+++-...+.|..+
T Consensus       229 ~giavdp~~g~l--yv~d~~~~~V~~~~~~~~~~~~~~~~~~~---~~P~gia~~pdG~~lyv~d~~~~~I~~~  297 (430)
T 3tc9_A          229 NGAETHPINGEL--YFNSWNAGQVFRYDFTTQETTPLFTIQDS---GWEFHIQFHPSGNYAYIVVVNQHYILRS  297 (430)
T ss_dssp             CCEEECTTTCCE--EEEETTTTEEEEEETTTTEEEEEEECSSS---SCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             eEEEEeCCCCEE--EEEECCCCEEEEEECCCCcEEEEEEcCCC---CcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence            445555633332  45555667888888876543211211110   3467899999998 56666667777664

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=90.86  E-value=1.9  Score=26.73  Aligned_cols=89  Identities=10%  Similarity=-0.151  Sum_probs=45.5

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF   86 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~   86 (106)
                      ..|+..++...........   ......+.|.+.....  +++-...+.|..+++..+.....+....    .....+++
T Consensus        96 ~~I~~i~~~~~~~~~~~~~---~~~~~gl~~d~~~~~l--y~~D~~~~~I~r~~~~g~~~~~~~~~~~----~~p~glav  166 (386)
T 3v65_B           96 IDIRQVLPHRSEYTLLLNN---LENAIALDFHHRRELV--FWSDVTLDRILRANLNGSNVEEVVSTGL----ESPGGLAV  166 (386)
T ss_dssp             SCEEEECTTSCCCEEEECS---CSCEEEEEEETTTTEE--EEEETTTTEEEEEETTSCCEEEEECSSC----SCCCCEEE
T ss_pred             ccceeeccCCCcEEEEecC---CCccEEEEEecCCCeE--EEEeCCCCcEEEEecCCCCcEEEEeCCC----CCccEEEE
Confidence            3456666654443212111   2234557777665553  4566667788888887554222222221    23455666


Q ss_pred             cC-CCCEEEEecCCCeEEE
Q psy17135         87 HP-SKPFIASAGADGLAKV  104 (106)
Q Consensus        87 ~~-~~~~~~s~~~d~~i~i  104 (106)
                      .+ .+.++++-...+.|.+
T Consensus       167 d~~~g~lY~~d~~~~~I~~  185 (386)
T 3v65_B          167 DWVHDKLYWTDSGTSRIEV  185 (386)
T ss_dssp             ETTTTEEEEEETTTTEEEE
T ss_pred             EeCCCeEEEEcCCCCeEEE
Confidence            65 3444555555555544

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=90.83  E-value=1.6  Score=25.94  Aligned_cols=83  Identities=8%  Similarity=-0.035  Sum_probs=44.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~   83 (106)
                      ++.|..+|..+++.......   ......+.+.+.+...  +++-...+.|..+++.....  ...+....    . ...
T Consensus       164 ~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~l--yv~d~~~~~I~~~~~~~~~~~~~~~~~~~~----g-P~g  233 (322)
T 2fp8_A          164 TGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFV--LVAEFLSHQIVKYWLEGPKKGTAEVLVKIP----N-PGN  233 (322)
T ss_dssp             CEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEE--EEEEGGGTEEEEEESSSTTTTCEEEEEECS----S-EEE
T ss_pred             CceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEE--EEEeCCCCeEEEEECCCCcCCccceEEeCC----C-CCC
Confidence            45666777665543111111   1224456777766642  34545667899998875321  11121111    2 566


Q ss_pred             EEEcCCCCEEEEecC
Q psy17135         84 VAFHPSKPFIASAGA   98 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~   98 (106)
                      +++.+++.++++...
T Consensus       234 i~~d~~G~l~va~~~  248 (322)
T 2fp8_A          234 IKRNADGHFWVSSSE  248 (322)
T ss_dssp             EEECTTSCEEEEEEE
T ss_pred             eEECCCCCEEEEecC
Confidence            788888887666543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=90.11  E-value=2.1  Score=28.44  Aligned_cols=84  Identities=8%  Similarity=-0.018  Sum_probs=44.7

Q ss_pred             eEEEEeCccCceeeecccCCCCCC-CCeeEeeeCCCCceEEEeeCCC-----------CcEEEeeCCCccc--hheeccc
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSE-PPACQTIPSSNISLFDSRPGHD-----------CSIRLWNLDNKTC--VQEITAH   73 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~d-----------~~v~iwd~~~~~~--~~~~~~~   73 (106)
                      .|.+||..+.+.........+..+ ...+...|.+..   ++.|+.+           ..+.+||..+.+-  +......
T Consensus       433 ~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i---~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~  509 (656)
T 1k3i_A          433 IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGST---FITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV  509 (656)
T ss_dssp             EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCE---EEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred             EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCE---EEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence            567777776665332201111222 223344555554   5667643           4578899876542  2222222


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGA   98 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~   98 (106)
                      +    ....+..+.|++++++.|+.
T Consensus       510 R----~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          510 R----VYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             C----CTTEEEEECTTSCEEEEECC
T ss_pred             c----ccccHhhcCCCcEEEecCCC
Confidence            2    23334456789999999884

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=89.76  E-value=1.8  Score=24.90  Aligned_cols=91  Identities=10%  Similarity=-0.177  Sum_probs=50.8

Q ss_pred             ceEEEEeCccCceee-----ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          7 SVIYIWTLLELQTYA-----RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      +.|+.+|+.......     ....  .......+.+.+.+...  +++-..++.|..++...+.....+....    ...
T Consensus        10 ~~I~~~~~~g~~~~~~~~~~~~~~--~~~~~~gi~~d~~~~~l--y~~d~~~~~I~~~~~~g~~~~~~~~~~~----~~p   81 (267)
T 1npe_A           10 GKIERLPLERNTMKKTEAKAFLHI--PAKVIIGLAFDCVDKVV--YWTDISEPSIGRASLHGGEPTTIIRQDL----GSP   81 (267)
T ss_dssp             EEEEEEEESSSCBCGGGCEEEEEE--EEEEEEEEEEETTTTEE--EEEETTTTEEEEEESSSCCCEEEECTTC----CCE
T ss_pred             CeEEEEEecCcccccccceeeecC--CCCcEEEEEEecCCCEE--EEEECCCCEEEEEecCCCCcEEEEECCC----CCc
Confidence            467778876543210     0111  01123456666655543  4566667889999987654322222222    467


Q ss_pred             EEEEEcCCC-CEEEEecCCCeEEEc
Q psy17135         82 LDVAFHPSK-PFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~~~-~~~~s~~~d~~i~iw  105 (106)
                      ..+++.+++ ..+++....+.|.++
T Consensus        82 ~~ia~d~~~~~lyv~d~~~~~I~~~  106 (267)
T 1npe_A           82 EGIALDHLGRTIFWTDSQLDRIEVA  106 (267)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cEEEEEecCCeEEEEECCCCEEEEE
Confidence            888999854 455665556666554

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=88.36  E-value=2.6  Score=24.84  Aligned_cols=69  Identities=13%  Similarity=0.058  Sum_probs=45.4

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ....+.|.|.+...  +++...++.|...|.. ++.++.+.-...   .....+++.+++.++++.-.++.+.++
T Consensus        28 ~lSGla~~~~~~~L--~aV~d~~~~I~~ld~~-g~v~~~i~l~g~---~D~EGIa~~~~g~~~vs~E~~~~l~~~   96 (255)
T 3qqz_A           28 NISSLTWSAQSNTL--FSTINKPAAIVEMTTN-GDLIRTIPLDFV---KDLETIEYIGDNQFVISDERDYAIYVI   96 (255)
T ss_dssp             CEEEEEEETTTTEE--EEEEETTEEEEEEETT-CCEEEEEECSSC---SSEEEEEECSTTEEEEEETTTTEEEEE
T ss_pred             CcceeEEeCCCCEE--EEEECCCCeEEEEeCC-CCEEEEEecCCC---CChHHeEEeCCCEEEEEECCCCcEEEE
Confidence            45558888876542  4556668888888987 777776643221   467788888888776665555555543

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=88.22  E-value=2.1  Score=28.86  Aligned_cols=53  Identities=17%  Similarity=-0.144  Sum_probs=29.9

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN   63 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~   63 (106)
                      ...|+..++.+.+.......   ......+.|.+.....  +++-...+.|+.+++..
T Consensus       385 ~~~I~~id~~~~~~~~~~~~---~~~p~gla~d~~~~~L--y~sD~~~~~I~~~~~~g  437 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRI--YWSDLSQRMICSTQLDR  437 (699)
T ss_dssp             TTC-CEECTTSCCEECCSCC---CTTCCCCEEETTTTEE--EECCTTTTSBEEEESCC
T ss_pred             ccceEEEeCCCCcceeeecc---CcceEEEccccccCeE--EEEecCCCeEEEEecCC
Confidence            34667777766554222221   2235567777765552  45556667888888865

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=87.99  E-value=2.8  Score=24.79  Aligned_cols=55  Identities=13%  Similarity=-0.046  Sum_probs=32.8

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--hheeccccccCCCCeEEEEEc---CCCCEEEE
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--VQEITAHRKKFDESILDVAFH---PSKPFIAS   95 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~~---~~~~~~~s   95 (106)
                      ..+...+.+..   .++....+.|.+++.. ++.  +..+....    ....+++|.   |++..|..
T Consensus       215 ~gi~vd~dG~l---~va~~~~~~V~~~~~~-G~~~~~~~~~~~~----~~p~~~a~~g~~~d~~~LyV  274 (306)
T 2p4o_A          215 DDFAFDVEGNL---YGATHIYNSVVRIAPD-RSTTIIAQAEQGV----IGSTAVAFGQTEGDCTAIYV  274 (306)
T ss_dssp             SSEEEBTTCCE---EEECBTTCCEEEECTT-CCEEEEECGGGTC----TTEEEEEECCSTTTTTEEEE
T ss_pred             CCeEECCCCCE---EEEeCCCCeEEEECCC-CCEEEEeeccccc----CCceEEEEecccCCCCEEEE
Confidence            33555555543   4565566789999875 543  22233232    567899998   78665433

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=87.07  E-value=0.7  Score=32.93  Aligned_cols=23  Identities=17%  Similarity=0.362  Sum_probs=20.5

Q ss_pred             EEeeCCCCcEEEeeCCCccchhe
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQE   69 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~   69 (106)
                      +++-+.|+++|+|++.+++++.+
T Consensus       252 lftL~~D~~LRiWsl~t~~~v~t  274 (1139)
T 4fhn_B          252 LVMLSLDYKLKVLDLSTNQCVET  274 (1139)
T ss_dssp             EEEEBTTCEEEEEETTTTEEEEE
T ss_pred             EEEEeCCCEEEEEECCCCCeEEe
Confidence            78999999999999999987665

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=86.99  E-value=5.4  Score=27.00  Aligned_cols=93  Identities=6%  Similarity=-0.086  Sum_probs=44.5

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeC-CCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPG-HDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .+.|.+.++...........  .......+.+.|.....  +++-. ..+.|...++.... ...+.....   .....+
T Consensus       474 ~~~I~v~d~dg~~~~~l~~~--~~~~P~giavDp~~g~l--y~td~~~~~~I~~~~~dG~~-~~~l~~~~l---~~PnGl  545 (699)
T 1n7d_A          474 LGTVSVADTKGVKRKTLFRE--QGSKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGVD-IYSLVTENI---QWPNGI  545 (699)
T ss_dssp             TSCEEEEBSSSCCEEEECCC--SSCCCCCEECCSSSSCC--EECCCSSSCCEEBCCSSSCC-CCEESCSSC---SSCCCE
T ss_pred             CCeEEEEecCCCceEEEEeC--CCCCcceEEEccCCCcE--EEcccCCCCeEEEEeCCCCC-eeEEEeCCC---CCccEE
Confidence            45666676654433111111  11223445555654442  33432 23677777665322 222211110   345678


Q ss_pred             EEcCC-CCEEEEecCCCeEEEcC
Q psy17135         85 AFHPS-KPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~-~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+ +.++++-...+.|..++
T Consensus       546 avd~~~~~LY~aD~~~~~I~~~d  568 (699)
T 1n7d_A          546 TLDLLSGRLYWVDSKLHSISSID  568 (699)
T ss_dssp             EECTTTCCEEEEETTTTEEEEEC
T ss_pred             EEeccCCEEEEEecCCCeEEEEc
Confidence            88875 45566666666666543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=86.80  E-value=3.7  Score=24.99  Aligned_cols=67  Identities=12%  Similarity=-0.081  Sum_probs=36.7

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcC-CCCEEEEecCCCeEEE
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHP-SKPFIASAGADGLAKV  104 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~i~i  104 (106)
                      ...+.|.+.....  +.+-...+.|..+++..+.....+....    .....+++.+ .+.++++-...+.|.+
T Consensus        75 ~~~l~~d~~~~~l--y~~D~~~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~ly~~d~~~~~I~~  142 (349)
T 3v64_C           75 AIALDFHHRRELV--FWSDVTLDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYWTDSGTSRIEV  142 (349)
T ss_dssp             EEEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             eEEEEEeccccEE--EEEeccCCceEEEecCCCCceEEEeCCC----CCccEEEEecCCCeEEEEcCCCCeEEE
Confidence            4556777665553  4565667788888887554222222222    3445667765 4444555555555544

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=86.14  E-value=0.61  Score=32.64  Aligned_cols=24  Identities=21%  Similarity=0.403  Sum_probs=20.9

Q ss_pred             EEeeCCCCcEEEeeCCCccchhee
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEI   70 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~   70 (106)
                      +.+-+.|+++|+|++.+++++.+.
T Consensus       250 lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          250 LVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             EEEEETTCEEEEEETTTTEEEEEE
T ss_pred             EEEEECCCEEEEEECCCCCeEeee
Confidence            789999999999999999876653

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=86.01  E-value=5.4  Score=26.03  Aligned_cols=51  Identities=22%  Similarity=0.213  Sum_probs=36.3

Q ss_pred             EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeE
Q psy17135         48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLA  102 (106)
Q Consensus        48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i  102 (106)
                      ..-..-|.+.++|+.++.++..-+-..    +.|+..+.+....-++...+.|.|
T Consensus       274 yviTK~G~i~lyDleTgt~i~~nrIs~----~~iF~t~~~~~~~Gi~~Vnr~GqV  324 (494)
T 1bpo_A          274 FLITKYGYIHLYDLETGTCIYMNRISG----ETIFVTAPHEATAGIIGVNRKGQV  324 (494)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECCS----SCEEEEEEETTTTEEEEEETTCEE
T ss_pred             EEEecCceEEEEecccceeeeeecccC----CceEEecccCCCCcEEEEccCceE
Confidence            445556899999999999987776665    677766666555556665666655

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=85.62  E-value=5  Score=25.36  Aligned_cols=67  Identities=13%  Similarity=0.120  Sum_probs=38.4

Q ss_pred             eEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEEc
Q psy17135         35 CQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKVF  105 (106)
Q Consensus        35 ~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iw  105 (106)
                      +.+.|.....  +++-..++.|..++..++.....+.....  ...-..++++|++. ++++-...+.|+.+
T Consensus       233 iavd~~~G~l--yv~d~~~~~V~~~d~~~g~~~~~~~~~~~--~~~~~~ia~dpdG~~LYvad~~~~~I~~~  300 (433)
T 4hw6_A          233 CAVHPQNGKI--YYTRYHHAMISSYDPATGTLTEEEVMMDT--KGSNFHIVWHPTGDWAYIIYNGKHCIYRV  300 (433)
T ss_dssp             CEECTTTCCE--EECBTTCSEEEEECTTTCCEEEEEEECSC--CSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             EEEeCCCCeE--EEEECCCCEEEEEECCCCeEEEEEeccCC--CCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence            4445533331  45555667888888876654223321110  02335699999998 55666666777653

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=85.00  E-value=4.3  Score=23.99  Aligned_cols=57  Identities=14%  Similarity=0.060  Sum_probs=36.0

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                      ...+.|.+.+..   +++-..++.|..+|...+ ....+. ..    .....+++.++++++++..
T Consensus        34 pegia~~~~g~l---yv~d~~~~~I~~~d~~g~-~~~~~~-~~----~~p~gia~~~dG~l~vad~   90 (306)
T 2p4o_A           34 LENLASAPDGTI---FVTNHEVGEIVSITPDGN-QQIHAT-VE----GKVSGLAFTSNGDLVATGW   90 (306)
T ss_dssp             EEEEEECTTSCE---EEEETTTTEEEEECTTCC-EEEEEE-CS----SEEEEEEECTTSCEEEEEE
T ss_pred             cceEEECCCCCE---EEEeCCCCeEEEECCCCc-eEEEEe-CC----CCceeEEEcCCCcEEEEec
Confidence            344667675543   566667788988887653 222222 22    4678889999988766553

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=83.34  E-value=6.2  Score=24.58  Aligned_cols=90  Identities=13%  Similarity=-0.095  Sum_probs=46.3

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc---chheecc-ccccCCCCeE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT---CVQEITA-HRKKFDESIL   82 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~---~~~~~~~-~~~~~~~~v~   82 (106)
                      ..|+..|+...........   ......+.|.+.....  +.+-...+.|+.+++....   ....+.. ..    ....
T Consensus        92 ~~I~~i~l~~~~~~~~~~~---~~~~~~l~~d~~~~~l--ywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~----~~p~  162 (400)
T 3p5b_L           92 HEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRI--YWSDLSQRMICSTQLDRAHGVSSYDTVISRDI----QAPD  162 (400)
T ss_dssp             TEEEEECTTSCSCEEEECS---CSCEEEEEEETTTTEE--EEEETTTTEEEEEEC------CCCEEEECSSC----SCEE
T ss_pred             ceeEEEccCCcceeEeccc---cCcceEEeeeeccCce--EEEecCCCeEEEEEcccCCCCCcceEEEeCCC----CCcc
Confidence            4566666665443222211   2235567777765553  4565666788888876521   1122222 22    4566


Q ss_pred             EEEEcC-CCCEEEEecCCCeEEEc
Q psy17135         83 DVAFHP-SKPFIASAGADGLAKVF  105 (106)
Q Consensus        83 ~~~~~~-~~~~~~s~~~d~~i~iw  105 (106)
                      .+++.+ .+.++++-...+.|.+.
T Consensus       163 glavD~~~~~lY~~d~~~~~I~~~  186 (400)
T 3p5b_L          163 GLAVDWIHSNIYWTDSVLGTVSVA  186 (400)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cEEEEecCCceEEEECCCCeEEEE
Confidence            777776 45555555555565543

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=82.09  E-value=1.1  Score=30.67  Aligned_cols=24  Identities=21%  Similarity=0.537  Sum_probs=20.9

Q ss_pred             EEeeCCCCcEEEeeCCCccchhee
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEI   70 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~   70 (106)
                      +++-+.|+++|+|++.+++++...
T Consensus       234 LftL~~Dh~LRiWsL~t~~lv~t~  257 (729)
T 3f7f_A          234 LIVLTQNCHLKIWDLTSFTLIQDY  257 (729)
T ss_dssp             EEEEETTCEEEEEETTTTEEEEEE
T ss_pred             EEEEEcCCeEEEEEcCCCceEEee
Confidence            789999999999999999876554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=81.74  E-value=7.4  Score=24.29  Aligned_cols=93  Identities=10%  Similarity=0.054  Sum_probs=51.0

Q ss_pred             CCceEEEEeCc-------cCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-----ccchheec-
Q psy17135          5 PSSVIYIWTLL-------ELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-----KTCVQEIT-   71 (106)
Q Consensus         5 ~d~~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-----~~~~~~~~-   71 (106)
                      .+|.+..|++.       +.+.+..+...   +....|...+....   |..+-++.-|-.++.+.     ++.+..+. 
T Consensus       151 k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---sq~EgcvvDd~~g~---Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~  224 (355)
T 3amr_A          151 KEGEFEQYELKADKNGYISGKKVRAFKMN---SQTEGMAADDEYGR---LYIAEEDEAIWKFSAEPDGGSNGTVIDRADG  224 (355)
T ss_dssp             SSSEEEEEEEEECTTSCEEEEEEEEEECS---SCEEEEEEETTTTE---EEEEETTTEEEEEECSTTSCSCCEEEEEBSS
T ss_pred             CCCeEEEEEEEeCCCCcccceEEEEecCC---CCcceEEEcCCCCe---EEEecccceEEEEeCCcCCCCCceEEEEecC
Confidence            45778888883       33444455542   33445666666666   67787775555555442     23333321 


Q ss_pred             cccccCCCCeEEEEE--cCCCC-E-EEEecCCCeEEEcC
Q psy17135         72 AHRKKFDESILDVAF--HPSKP-F-IASAGADGLAKVFV  106 (106)
Q Consensus        72 ~~~~~~~~~v~~~~~--~~~~~-~-~~s~~~d~~i~iwd  106 (106)
                      .+-   ...+..+++  .+++. + ++|+-.+.+..+||
T Consensus       225 g~l---~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd  260 (355)
T 3amr_A          225 RHL---TRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD  260 (355)
T ss_dssp             SSB---CSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred             Ccc---ccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence            122   146777877  45555 4 45554566666664

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=81.19  E-value=8  Score=24.37  Aligned_cols=88  Identities=7%  Similarity=-0.065  Sum_probs=44.3

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC----cEEEeeCCCccch--heeccccccCCCC
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC----SIRLWNLDNKTCV--QEITAHRKKFDES   80 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~----~v~iwd~~~~~~~--~~~~~~~~~~~~~   80 (106)
                      +.|+.+|+.++.......   .......+.+.+.+...  +++...++    .+...+. .+...  ..+. ..    ..
T Consensus       159 ~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~l--yvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~----~~  227 (430)
T 3tc9_A          159 HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSM--IITNDQNNNDRPNNYILTR-ESGFKVITELT-KG----QN  227 (430)
T ss_dssp             EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEE--EEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-EC----SS
T ss_pred             CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEE--EEEeCCCCcccceEEEEeC-CCceeeeeeec-cC----CC
Confidence            567777776655422222   12234456777766632  34443222    2333332 23221  1222 11    34


Q ss_pred             eEEEEEcC-CCCEEEEecCCCeEEEc
Q psy17135         81 ILDVAFHP-SKPFIASAGADGLAKVF  105 (106)
Q Consensus        81 v~~~~~~~-~~~~~~s~~~d~~i~iw  105 (106)
                      ...++++| ++.++++-..++.|..+
T Consensus       228 p~giavdp~~g~lyv~d~~~~~V~~~  253 (430)
T 3tc9_A          228 CNGAETHPINGELYFNSWNAGQVFRY  253 (430)
T ss_dssp             CCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred             ceEEEEeCCCCEEEEEECCCCEEEEE
Confidence            56777888 77777776666776655

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=80.99  E-value=7.3  Score=23.73  Aligned_cols=66  Identities=12%  Similarity=-0.031  Sum_probs=34.7

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCC-CEEEEecCC-CeEEE
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSK-PFIASAGAD-GLAKV  104 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d-~~i~i  104 (106)
                      ..+.+.+.+...  +++-...+.|.+.+++.......+....    .....+++.|.+ .++++-... +.|..
T Consensus       119 ~glavd~~~g~l--y~~d~~~~~I~~~~~dG~~~~~l~~~~l----~~P~~iavdp~~g~ly~td~~~~~~I~r  186 (349)
T 3v64_C          119 GGLAVDWVHDKL--YWTDSGTSRIEVANLDGAHRKVLLWQSL----EKPRAIALHPMEGTIYWTDWGNTPRIEA  186 (349)
T ss_dssp             CEEEEETTTTEE--EEEETTTTEEEEEETTSCSCEEEECTTC----SCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred             cEEEEecCCCeE--EEEcCCCCeEEEEcCCCCceEEEEeCCC----CCcceEEEecCcCeEEEeccCCCCEEEE
Confidence            344444444432  4566666788888876443222222222    456788888844 445554443 44443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=80.59  E-value=11  Score=25.62  Aligned_cols=89  Identities=11%  Similarity=0.079  Sum_probs=42.2

Q ss_pred             eEEEEeCccCceeeecccCC-CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-ch--heeccccccCCCCeEE
Q psy17135          8 VIYIWTLLELQTYARNDCPE-LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CV--QEITAHRKKFDESILD   83 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~--~~~~~~~~~~~~~v~~   83 (106)
                      .|..+++.+++......... .........|+|++....+.........+.++|+.++. ..  ..+....   ......
T Consensus       248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~---~~~~~s  324 (751)
T 2xe4_A          248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE---KGVRYD  324 (751)
T ss_dssp             EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC---TTCCEE
T ss_pred             EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC---CCceEE
Confidence            57777776654211111111 11123346788888775332222234557788887652 12  3332222   134455


Q ss_pred             EEEcCCCCEEEEecCC
Q psy17135         84 VAFHPSKPFIASAGAD   99 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d   99 (106)
                      +.|+..+.+++....+
T Consensus       325 ~~~~~g~~l~~~t~~~  340 (751)
T 2xe4_A          325 VQMHGTSHLVILTNEG  340 (751)
T ss_dssp             EEEETTTEEEEEECTT
T ss_pred             EeeeeCCEEEEEeCCC
Confidence            5555444445554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	106
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-10
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.003
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.001
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	0.004
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	7e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-06
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	6e-04

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (126), Expect = 3e-10
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D ++R+W+  NK C++ + AH    +  +  + FH + P++ +   D   KV+
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAH----EHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (103), Expect = 4e-07
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 19  TYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFD 78
           ++A        SE    +T  S     F      D +I++W++    C+  +  H    D
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH----D 247

Query: 79  ESILDVAFHPSKPFIASAGADGLAKVF 105
             +  V FH    FI S   D   +V+
Sbjct: 248 NWVRGVLFHSGGKFILSCADDKTLRVW 274

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (74), Expect = 0.003
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 5/49 (10%)

Query: 57  RLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           + W          ++ HR      +  V FHP    + SA  D   KV+
Sbjct: 1   KEWIPR-PPEKYALSGHRS----PVTRVIFHPVFSVMVSASEDATIKVW 44

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.5 bits (119), Expect = 2e-09
 Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 4/55 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +  +W+         +  H    D  +  +        +A+   D   K++
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGH----DNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.6 bits (101), Expect = 7e-07
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 52  HDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
            D S +LW++    C Q  T H    +  I  + F P+    A+   D   ++F
Sbjct: 204 CDASAKLWDVREGMCRQTFTGH----ESDINAICFFPNGNAFATGSDDATCRLF 253

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (106), Expect = 2e-07
 Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 5/55 (9%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           G D  +  W       + +      K   S+L         +I +   D  A V+
Sbjct: 284 GKDNLLNAWRTPYGASIFQS-----KESSSVLSCDISVDDKYIVTGSGDKKATVY 333

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 2e-07
 Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 1/57 (1%)

Query: 51  GHDCSIRLWNLDNKTCVQEI-TAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
             D +++LW+L     ++ + T         +  +    +K   A    +G  +  +
Sbjct: 277 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 333

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (77), Expect = 0.001
 Identities = 4/42 (9%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 51 GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF 92
            D ++++W+     C++ +  H       +       +   
Sbjct: 34 SDDNTLKVWSAVTGKCLRTLVGHTG----GVWSSQMRDNIII 71

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.8 bits (104), Expect = 3e-07
 Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 8/105 (7%)

Query: 8   VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP--------GHDCSIRLW 59
            I ++     +       P  +S+    +   SS +               G D  +R W
Sbjct: 257 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 316

Query: 60  NLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104
           ++  K  +  +  H    +     +A       +A  G   +  +
Sbjct: 317 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.4 bits (103), Expect = 4e-07
 Identities = 8/57 (14%), Positives = 18/57 (31%), Gaps = 2/57 (3%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFD--ESILDVAFHPSKPFIASAGADGLAKVF 105
             D  +  W+  +   +  +  HR            +  P     A+   D  A+++
Sbjct: 327 SKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.8 bits (73), Expect = 0.004
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKF---DESILDVAFHPSKPFIASAGADGLAKVF 105
             D ++R+W+ +    V+ + +  +      +S+  V F      + S   D   K++
Sbjct: 224 SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.7 bits (101), Expect = 7e-07
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +I++WN+      + I    +  D+    +    +K  + S  A+G     
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQ---LGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.9 bits (91), Expect = 1e-05
 Identities = 9/50 (18%), Positives = 15/50 (30%), Gaps = 4/50 (8%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADG 100
            +  S+    + + T  +  T H              PS  + AS    G
Sbjct: 35  CNGTSVYTVPVGSLTDTEIYTEHSH----QTTVAKTSPSGYYCASGDVHG 80

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 2e-06
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
           G D +IR+W++    CVQ+ T  +++     + V    +   I S   DG    +
Sbjct: 270 GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDGTLNFY 323

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.0 bits (94), Expect = 5e-06
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
            ++  + ++       VQ      K+ +  +  V + P    I + G D  A V+
Sbjct: 26  PNNHEVHIYEKSGNKWVQVHEL--KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 78

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.2 bits (92), Expect = 1e-05
 Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 5/57 (8%)

Query: 48  SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV 104
              G D  I  WNL  +  ++               V    S   +  A +D   K 
Sbjct: 267 YTAGSDGIISCWNLQTRKKIKNFAKF-----NEDSVVKIACSDNILCLATSDDTFKT 318

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.0 bits (81), Expect = 3e-04
 Identities = 6/47 (12%), Positives = 16/47 (34%), Gaps = 1/47 (2%)

Query: 51 GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97
            D S+ ++  D +    ++     ++   +L   F  +       G
Sbjct: 30 SWDGSLTVYKFDIQAKNVDLL-QSLRYKHPLLCCNFIDNTDLQIYVG 75

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.8 bits (78), Expect = 9e-04
 Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 4/40 (10%)

Query: 66  CVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
            VQ   A      + I D+   PSK  +     DG   V+
Sbjct: 3   IVQIEQAP----KDYISDIKIIPSKSLLLITSWDGSLTVY 38

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (88), Expect = 3e-05
 Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 51  GHDCSIRLWNLDN-KTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D +I ++++      ++ + AH     + + ++ +      + S+GAD   K +
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAH----KDGVNNLLWETPS-TLVSSGADACIKRW 284

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 3e-05
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV 106
           G +    ++NL +   V           + I  V F      +A+   DG + + +
Sbjct: 300 GSENQFNIYNLRSGKLVHANILKDA---DQIWSVNFKGKT-LVAAVEKDGQSFLEI 351

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 2e-04
 Identities = 7/47 (14%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 51 GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG 97
            D  IR+++  NK  + +++ H    D  +  + +      ++ + 
Sbjct: 30 ADDKMIRVYDSINKKFLLQLSGH----DGGVWALKYAHGGILVSGST 72

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.7 bits (85), Expect = 1e-04
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 51  GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF 105
             D S+ +WN++  +    I         S ++     ++  I SAG D   K +
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAH--AMSSVNSVIWLNETTIVSAGQDSNIKFW 295

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (79), Expect = 6e-04
 Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 15/62 (24%)

Query: 52  HDCSIRLWNL---------DNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLA 102
           +D  I++W+L             C++ +  H       +  + F      I S+  D   
Sbjct: 236 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEH----SGRVFRLQFDEF--QIVSSSHDDTI 289

Query: 103 KV 104
            +
Sbjct: 290 LI 291

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	106
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.85
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.85
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.83
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.74
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.74
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.74
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.71
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.7
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.7
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.69
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.69
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.67
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.67
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.65
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.65
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.62
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.61
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.61
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.6
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.6
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.59
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.56
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.54
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.54
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.54
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.52
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.5
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.49
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.48
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.44
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.41
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.31
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.3
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.23
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.22
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.21
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.15
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.09
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.08
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.04
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.02
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.79
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.75
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.72
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.67
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.59
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.5
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.48
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.11
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	97.97
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	97.15
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.13
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.12
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	96.95
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.76
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	96.67
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	96.55
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	96.45
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	96.28
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.14
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.07
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.01
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.85
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.66
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	95.63
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.51
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	95.41
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	95.38
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	94.95
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	94.33
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	93.62
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	93.59
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	93.04
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	92.86
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	92.41
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	90.97
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	87.66
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	84.06
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	80.04

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=3e-21  Score=112.23  Aligned_cols=94  Identities=17%  Similarity=0.330  Sum_probs=84.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++++..+..  |...+..+.+.|.+..   |++++.|+.|++||+++++++..+.+|.    ..|++
T Consensus       224 ~~d~~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~h~----~~V~~  294 (317)
T d1vyhc1         224 SRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKF---ILSCADDKTLRVWDYKNKRCMKTLNAHE----HFVTS  294 (317)
T ss_dssp             ETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSC---EEEEETTTEEEEECCTTSCCCEEEECCS----SCEEE
T ss_pred             cCCCEEEEEECCCCcEEEEEeC--CCCCEEEEEECCCCCE---EEEEECCCeEEEEECCCCcEEEEEcCCC----CCEEE
Confidence            4689999999999998666654  3455667889998887   8999999999999999999999999998    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.+|++|+.|++|++||
T Consensus       295 ~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         295 LDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEcCCCCEEEEEeCCCeEEEeC
Confidence            99999999999999999999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.85  E-value=9.6e-21  Score=111.45  Aligned_cols=96  Identities=9%  Similarity=0.081  Sum_probs=85.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+........+....+...+..+.|+|.+..   +++|+.|+.|++||+.+++++..+.+|.    ..|.+
T Consensus       245 s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~---l~~g~~dg~i~iwd~~~~~~~~~~~~H~----~~V~~  317 (340)
T d1tbga_         245 SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL---LLAGYDDFNCNVWDALKADRAGVLAGHD----NRVSC  317 (340)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCEEE
T ss_pred             eCCCeEEEEeecccccccccccccccCceEEEEECCCCCE---EEEEECCCEEEEEECCCCcEEEEEcCCC----CCEEE
Confidence            4689999999999888666665555555667888888877   8999999999999999999999999998    89999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.+|++|+.|++|++||
T Consensus       318 l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         318 LGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEeCCCCEEEEEccCCEEEEeC
Confidence            99999999999999999999997

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=1.4e-20  Score=114.13  Aligned_cols=97  Identities=16%  Similarity=0.226  Sum_probs=80.4

Q ss_pred             cCCCceEEEEeCccCceeeecccC----CCCCCCCeeEeeeCCCCceEEEeeCCCCc---EEEeeCCCccchheec----
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCP----ELNSEPPACQTIPSSNISLFDSRPGHDCS---IRLWNLDNKTCVQEIT----   71 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~---v~iwd~~~~~~~~~~~----   71 (106)
                      ...|++|++||+.+++++..+...    .|...+.++.|+|.+..   |++|+.|++   +++||+++++++..+.    
T Consensus       201 gs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~---l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~  277 (393)
T d1sq9a_         201 GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL---LAIAHDSNSFGCITLYETEFGERIGSLSVPTH  277 (393)
T ss_dssp             ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE---EEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred             EeCCCcEEEEeecccccccccccccccccccceEEEcccccccce---eeeecCCCCcceeeecccccceeeeeeccccc
Confidence            357999999999998886655432    24556777999998887   899998874   8999999988766654    


Q ss_pred             ---------cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         72 ---------AHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        72 ---------~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                               +|.    ..|++++|+|++++|+|++.|++|++||
T Consensus       278 ~~~~~~~~~gH~----~~V~~l~fspd~~~l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         278 SSQASLGEFAHS----SWVMSLSFNDSGETLCSAGWDGKLRFWD  317 (393)
T ss_dssp             ------CCBSBS----SCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             cccceeeeeccc----CceeeeccCCCCCeeEEECCCCEEEEEE
Confidence                     455    8999999999999999999999999996

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=7.4e-18  Score=100.09  Aligned_cols=92  Identities=14%  Similarity=0.155  Sum_probs=77.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++....   ..|...+..+.|+|.+..   +++++.|+.|++||..+++.+..+. |.    ..|.+
T Consensus       243 ~~d~~i~i~d~~~~~~~~~---~~~~~~i~~v~~s~~g~~---l~s~s~Dg~i~iwd~~~~~~~~~~~-~~----~~v~~  311 (337)
T d1gxra_         243 MESSNVEVLHVNKPDKYQL---HLHESCVLSLKFAYCGKW---FVSTGKDNLLNAWRTPYGASIFQSK-ES----SSVLS  311 (337)
T ss_dssp             ETTSCEEEEETTSSCEEEE---CCCSSCEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEE-CS----SCEEE
T ss_pred             ccccccccccccccccccc---cccccccceEEECCCCCE---EEEEeCCCeEEEEECCCCCEEEEcc-CC----CCEEE
Confidence            4689999999998886332   234555677899998877   8999999999999999998876654 55    78999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++++|++|+.|++|++||
T Consensus       312 ~~~s~d~~~l~t~s~D~~I~vWd  334 (337)
T d1gxra_         312 CDISVDDKYIVTGSGDKKATVYE  334 (337)
T ss_dssp             EEECTTSCEEEEEETTSCEEEEE
T ss_pred             EEEeCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999996

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.74  E-value=5.8e-18  Score=100.08  Aligned_cols=99  Identities=17%  Similarity=0.152  Sum_probs=78.9

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc---ccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR---KKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~~   79 (106)
                      ...|++|++||+++++.......  |...+..+.|+|.+..   +++++.|+.+++||..++.....+....   ..|..
T Consensus       165 gs~d~~i~i~d~~~~~~~~~~~~--~~~~i~~v~~~p~~~~---l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~  239 (311)
T d1nr0a1         165 GSDDNTVAIFEGPPFKFKSTFGE--HTKFVHSVRYNPDGSL---FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG  239 (311)
T ss_dssp             EETTSCEEEEETTTBEEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred             ccccccccccccccccccccccc--ccccccccccCccccc---cccccccccccccccccccccccccccccccccccc
Confidence            34689999999999887554443  4555677899998777   8999999999999999887655543221   11237


Q ss_pred             CeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .|.+++|+|++.+|++|+.|+.|++||
T Consensus       240 ~V~~~~~s~~~~~l~tgs~Dg~v~iwd  266 (311)
T d1nr0a1         240 SVFGLTWSPDGTKIASASADKTIKIWN  266 (311)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cccccccCCCCCEEEEEeCCCeEEEEE
Confidence            899999999999999999999999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=3e-18  Score=102.68  Aligned_cols=96  Identities=15%  Similarity=0.241  Sum_probs=73.2

Q ss_pred             CCCceEEEEeCccCceeeeccc----------CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDC----------PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAH   73 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~   73 (106)
                      ..|+.|++||+.++........          ..|...+..+.|.|.+..   +++|+.|+.|++||+++++++..+.+|
T Consensus       273 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---l~sg~~dg~i~vwd~~~~~~~~~l~~H  349 (388)
T d1erja_         273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY---ILSGSKDRGVLFWDKKSGNPLLMLQGH  349 (388)
T ss_dssp             ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE---EEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             ECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCE---EEEEeCCCEEEEEECCCCcEEEEEeCC
Confidence            4689999999987654222111          113445566888888777   899999999999999999999999999


Q ss_pred             cccCCCCeEEEEE------cCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAF------HPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~------~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .    ..|.++++      +|++.+|++|+.|++|++|+
T Consensus       350 ~----~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~  384 (388)
T d1erja_         350 R----NSVISVAVANGSSLGPEYNVFATGSGDCKARIWK  384 (388)
T ss_dssp             S----SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred             C----CCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEe
Confidence            8    89998875      57889999999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.71  E-value=1.9e-17  Score=99.56  Aligned_cols=97  Identities=15%  Similarity=0.130  Sum_probs=78.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch--heeccccccCCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV--QEITAHRKKFDES   80 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~   80 (106)
                      ...|+.|++||+.+++.........|...+.++.|+|.+..   +++++.|+.|++||+.++...  ..+..|.    ..
T Consensus        25 ~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~---l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~----~~   97 (371)
T d1k8kc_          25 CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR---IVTCGTDRNAYVWTLKGRTWKPTLVILRIN----RA   97 (371)
T ss_dssp             ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTE---EEEEETTSCEEEEEEETTEEEEEEECCCCS----SC
T ss_pred             EeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCE---EEEEECCCeEEEEeeccccccccccccccc----cc
Confidence            45789999999988765444444446666788999998887   899999999999999876533  3344555    78


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+++|+|+++.+++++.|+++++|+
T Consensus        98 v~~i~~~p~~~~l~~~s~d~~i~i~~  123 (371)
T d1k8kc_          98 ARCVRWAPNEKKFAVGSGSRVISICY  123 (371)
T ss_dssp             EEEEEECTTSSEEEEEETTSSEEEEE
T ss_pred             ccccccccccccceeecccCcceeee
Confidence            99999999999999999999999984

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=9.6e-17  Score=93.05  Aligned_cols=97  Identities=14%  Similarity=0.194  Sum_probs=74.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCC-------CceEEEeeCCCCcEEEeeCCC-ccchheeccccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSN-------ISLFDSRPGHDCSIRLWNLDN-KTCVQEITAHRK   75 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~s~~~d~~v~iwd~~~-~~~~~~~~~~~~   75 (106)
                      ..||.|++||+.+++..... ...|...+..+.|+|...       ...++++|+.|+.|++||+++ .+.+..+.+|. 
T Consensus       181 ~~dg~i~i~d~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~-  258 (287)
T d1pgua2         181 DVMGKILLYDLQSREVKTSR-WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK-  258 (287)
T ss_dssp             ETTSCEEEEETTTTEEEECC-SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST-
T ss_pred             cccccccceeeccccccccc-ccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCC-
Confidence            46899999999988763322 223455566788887542       233479999999999999977 45566677788 


Q ss_pred             cCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         76 KFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        76 ~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                         ..|.++.|+|++ .+++++.|++|++|+
T Consensus       259 ---~~V~~v~~~~~~-~l~s~g~D~~v~iW~  285 (287)
T d1pgua2         259 ---DGVNNLLWETPS-TLVSSGADACIKRWN  285 (287)
T ss_dssp             ---TCEEEEEEEETT-EEEEEETTSCEEEEE
T ss_pred             ---CCeEEEEECCCC-EEEEEECCCeEEEEE
Confidence               899999999976 588999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.70  E-value=3.8e-17  Score=98.23  Aligned_cols=97  Identities=14%  Similarity=0.180  Sum_probs=77.7

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe----eccccccCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE----ITAHRKKFD   78 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~----~~~~~~~~~   78 (106)
                      ...|++|++||+.++..........+...+.++.|.|.+..   +++++.|+.+++|++........    ...|.    
T Consensus        69 ~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~---l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~----  141 (371)
T d1k8kc_          69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK---FAVGSGSRVISICYFEQENDWWVCKHIKKPIR----  141 (371)
T ss_dssp             EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE---EEEEETTSSEEEEEEETTTTEEEEEEECTTCC----
T ss_pred             EECCCeEEEEeeccccccccccccccccccccccccccccc---ceeecccCcceeeeeecccccccccccccccc----
Confidence            45789999999998776545555445666777999998877   89999999999999876543322    23344    


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         79 ESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..|.+++|+|++.++++|+.|+++++|+
T Consensus       142 ~~v~~v~~~p~~~~l~s~s~D~~v~v~~  169 (371)
T d1k8kc_         142 STVLSLDWHPNSVLLAAGSCDFKCRIFS  169 (371)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cccccccccccccceeccccCcEEEEEe
Confidence            7899999999999999999999999995

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.69  E-value=1.4e-16  Score=93.45  Aligned_cols=96  Identities=17%  Similarity=0.134  Sum_probs=78.8

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+..+..  |...+.++.|+|.+..   +++++.|+.+++|+++....+..+.....  ...+.+
T Consensus       203 ~~d~~v~i~d~~~~~~~~~~~~--h~~~i~~v~~~p~~~~---l~s~s~d~~i~~~~~~~~~~~~~~~~~~~--~~~i~~  275 (340)
T d1tbga_         203 ACDASAKLWDVREGMCRQTFTG--HESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTYSHDNI--ICGITS  275 (340)
T ss_dssp             ETTTEEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEEEECCTTC--CSCEEE
T ss_pred             ecCceEEEEECCCCcEEEEEeC--CCCCeEEEEECCCCCE---EEEEeCCCeEEEEeecccccccccccccc--cCceEE
Confidence            4689999999999998666554  4555677899998777   89999999999999998876655532221  167999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.++++|+.|+.|++||
T Consensus       276 ~~~s~~~~~l~~g~~dg~i~iwd  298 (340)
T d1tbga_         276 VSFSKSGRLLLAGYDDFNCNVWD  298 (340)
T ss_dssp             EEECSSSCEEEEEETTSCEEEEE
T ss_pred             EEECCCCCEEEEEECCCEEEEEE
Confidence            99999999999999999999996

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.69  E-value=2.1e-16  Score=93.32  Aligned_cols=94  Identities=12%  Similarity=0.126  Sum_probs=79.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .+..+++|++++++....+..  |...+..+.|+|.+...  +++|+.|+.|++||+++++....+..|.    ..|.++
T Consensus       124 ~~~~~~v~~~~~~~~~~~l~~--h~~~v~~v~~~~~~~~~--l~sgs~d~~i~i~d~~~~~~~~~~~~~~----~~i~~v  195 (311)
T d1nr0a1         124 RERFGHVFLFDTGTSNGNLTG--QARAMNSVDFKPSRPFR--IISGSDDNTVAIFEGPPFKFKSTFGEHT----KFVHSV  195 (311)
T ss_dssp             SSCSEEEEETTTCCBCBCCCC--CSSCEEEEEECSSSSCE--EEEEETTSCEEEEETTTBEEEEEECCCS----SCEEEE
T ss_pred             ccccccccccccccccccccc--cccccccccccccceee--eccccccccccccccccccccccccccc----cccccc
Confidence            356689999999887544433  45556778899987764  6899999999999999999888888888    899999


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++|++.++++++.|+.+++||
T Consensus       196 ~~~p~~~~l~~~~~d~~v~~~d  217 (311)
T d1nr0a1         196 RYNPDGSLFASTGGDGTIVLYN  217 (311)
T ss_dssp             EECTTSSEEEEEETTSCEEEEE
T ss_pred             ccCccccccccccccccccccc
Confidence            9999999999999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.3e-16  Score=91.08  Aligned_cols=99  Identities=14%  Similarity=0.203  Sum_probs=72.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc-ccCCCCeE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR-KKFDESIL   82 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~v~   82 (106)
                      ..|+.|++||+...+....+.....+. .....+.+.+..   +++++.||.|++||++++++++.+.... ..+...|+
T Consensus       234 s~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~  309 (342)
T d2ovrb2         234 NADSTVKIWDIKTGQCLQTLQGPNKHQ-SAVTCLQFNKNF---VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW  309 (342)
T ss_dssp             ETTSCEEEEETTTCCEEEEECSTTSCS-SCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEE
T ss_pred             cCCCEEEEEecccccccccccccceee-eceeecccCCCe---eEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEE
Confidence            568999999999888755555432222 122223333344   7999999999999999999887765321 11226899


Q ss_pred             EEEEcCCCCEEEEecCCCe----EEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGL----AKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~----i~iwd  106 (106)
                      +++|+|++.++++|+.||+    +++||
T Consensus       310 ~v~~s~~~~~la~g~~dGt~~~~l~~~D  337 (342)
T d2ovrb2         310 RIRASNTKLVCAVGSRNGTEETKLLVLD  337 (342)
T ss_dssp             EEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCCCeeEEEEEe
Confidence            9999999999999999985    88886

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=1.8e-16  Score=93.86  Aligned_cols=101  Identities=14%  Similarity=0.127  Sum_probs=76.2

Q ss_pred             cCCCceEEEEeCccCceeeecccC-CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCP-ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|+.|++||+.+++........ .+...+.++.|+|.....  +++++.|+.|++||.++++++..+..|.......+
T Consensus       178 ~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~--l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~  255 (325)
T d1pgua1         178 VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF--VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI  255 (325)
T ss_dssp             EETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCE--EEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCE
T ss_pred             eecccccccccccccccceecccccCCCCccEEeeecccccee--ccccccccceeeeeeccccccccccccccccccce
Confidence            456999999999887765554432 233445668899865443  78999999999999999999999988773222334


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++.+ |++.+|++++.|+.|++||
T Consensus       256 ~s~~~-~dg~~l~s~s~D~~i~iwd  279 (325)
T d1pgua1         256 FALSW-LDSQKFATVGADATIRVWD  279 (325)
T ss_dssp             EEEEE-SSSSEEEEEETTSEEEEEE
T ss_pred             eeeec-cCCCEEEEEeCCCeEEEEE
Confidence            44444 5788999999999999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.65  E-value=3e-16  Score=91.31  Aligned_cols=95  Identities=12%  Similarity=0.091  Sum_probs=75.9

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch---heeccccccCCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV---QEITAHRKKFDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~---~~~~~~~~~~~~~   80 (106)
                      ..|+.|++||+.+++....... .|...+..+.|.|.+..   +++++.|+.+++||+.++...   ..+..|.    ..
T Consensus       155 ~~dg~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~---l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~----~~  226 (299)
T d1nr0a2         155 GQDSKVHVYKLSGASVSEVKTI-VHPAEITSVAFSNNGAF---LVATDQSRKVIPYSVANNFELAHTNSWTFHT----AK  226 (299)
T ss_dssp             ETTSEEEEEEEETTEEEEEEEE-ECSSCEEEEEECTTSSE---EEEEETTSCEEEEEGGGTTEESCCCCCCCCS----SC
T ss_pred             cccccccccccccccccccccc-ccccccccccccccccc---ccccccccccccccccccccccccccccccc----cc
Confidence            4689999999988765333222 23455677889988777   899999999999999876544   3445566    89


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |.+++|+|++.++++|+.|+.|++||
T Consensus       227 v~~l~~s~~~~~l~sgs~dg~i~iwd  252 (299)
T d1nr0a2         227 VACVSWSPDNVRLATGSLDNSVIVWN  252 (299)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cccccccccccceEEEcCCCEEEEEE
Confidence            99999999999999999999999996

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.1e-15  Score=90.66  Aligned_cols=92  Identities=14%  Similarity=0.230  Sum_probs=77.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+++++.+..+..   ...+..+.|.|.+..   +++++.|+.+++||++++... ....|.    ..|.+
T Consensus       202 ~~d~~v~i~d~~~~~~~~~~~~---~~~i~~l~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-~~~~~~----~~i~~  270 (337)
T d1gxra_         202 GLDNTVRSWDLREGRQLQQHDF---TSQIFSLGYCPTGEW---LAVGMESSNVEVLHVNKPDKY-QLHLHE----SCVLS  270 (337)
T ss_dssp             ETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECTTSSE---EEEEETTSCEEEEETTSSCEE-EECCCS----SCEEE
T ss_pred             cccccccccccccceeeccccc---ccceEEEEEcccccc---cceeccccccccccccccccc-cccccc----cccce
Confidence            4689999999999987665543   445667888888777   899999999999999887754 444566    79999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|++.++++++.|+.|++||
T Consensus       271 v~~s~~g~~l~s~s~Dg~i~iwd  293 (337)
T d1gxra_         271 LKFAYCGKWFVSTGKDNLLNAWR  293 (337)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEECCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999999996

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=1.6e-15  Score=89.01  Aligned_cols=91  Identities=18%  Similarity=0.231  Sum_probs=66.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe-eccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE-ITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~v   81 (106)
                      ...||+|++||+.++..  .+..+  ......+.+.+.+..   +++++.|+.|++||+++++++.. +.+|.    ..|
T Consensus       259 ~~~dg~i~iwd~~~~~~--~~~~~--~~~~~~~~~~~~~~~---~l~~g~d~~i~vwd~~tg~~~~~~~~~~~----~~V  327 (355)
T d1nexb2         259 AAADGSIRGWDANDYSR--KFSYH--HTNLSAITTFYVSDN---ILVSGSENQFNIYNLRSGKLVHANILKDA----DQI  327 (355)
T ss_dssp             ECTTSEEEEEETTTCCE--EEEEE--CTTCCCCCEEEECSS---EEEEEETTEEEEEETTTCCBCCSCTTTTC----SEE
T ss_pred             eecccccccccccccce--ecccc--cCCceEEEEEcCCCC---EEEEEeCCEEEEEECCCCCEEEEEecCCC----CCE
Confidence            35789999999998876  33332  233445445444544   34555689999999999998754 56676    799


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      .+++|+|+ ..+++++.||++++|
T Consensus       328 ~~v~~~~~-~~~~~~s~dg~~~l~  350 (355)
T d1nexb2         328 WSVNFKGK-TLVAAVEKDGQSFLE  350 (355)
T ss_dssp             EEEEEETT-EEEEEEESSSCEEEE
T ss_pred             EEEEEcCC-eEEEEEECCCcEEEE
Confidence            99999986 478889999987765

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.61  E-value=3e-15  Score=87.01  Aligned_cols=96  Identities=19%  Similarity=0.183  Sum_probs=70.2

Q ss_pred             CCCceEEEEeCccCceeeecc-cCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhee--ccccccCCCC
Q psy17135          4 VPSSVIYIWTLLELQTYARND-CPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEI--TAHRKKFDES   80 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~   80 (106)
                      ..|+.|++||+.++....... ...|...+.++.|+|.+..   +++++.|+.|++||++++.....+  ..+.   ...
T Consensus       198 ~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~---l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~---~~~  271 (299)
T d1nr0a2         198 DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR---LATGSLDNSVIVWNMNKPSDHPIIIKGAHA---MSS  271 (299)
T ss_dssp             ETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTCTTSCCEEETTSST---TSC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc---eEEEcCCCEEEEEECCCCCcceEEEecCCC---CCc
Confidence            468999999999877644332 2334555667889998877   899999999999999876543322  2333   145


Q ss_pred             eEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         81 ILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        81 v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.++.+ +++..|++++.|++|++||
T Consensus       272 v~~~~~-~~~~~l~s~s~D~~i~iWd  296 (299)
T d1nr0a2         272 VNSVIW-LNETTIVSAGQDSNIKFWN  296 (299)
T ss_dssp             EEEEEE-EETTEEEEEETTSCEEEEE
T ss_pred             EEEEEE-CCCCEEEEEeCCCEEEEEe
Confidence            666644 5677999999999999996

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=3.2e-15  Score=88.47  Aligned_cols=97  Identities=16%  Similarity=0.136  Sum_probs=69.2

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEee---eCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTI---PSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDE   79 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~   79 (106)
                      ...|+.|++||+++++.+..+..  |........|.   |++..   |++++.|+.|++||++++++++.+..+...  .
T Consensus       224 ~~~d~~i~iwd~~~~~~~~~l~~--~~~~v~~~~~s~~~~dg~~---l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~--~  296 (325)
T d1pgua1         224 VGSDRKISCFDGKSGEFLKYIED--DQEPVQGGIFALSWLDSQK---FATVGADATIRVWDVTTSKCVQKWTLDKQQ--L  296 (325)
T ss_dssp             EETTCCEEEEETTTCCEEEECCB--TTBCCCSCEEEEEESSSSE---EEEEETTSEEEEEETTTTEEEEEEECCTTC--G
T ss_pred             cccccceeeeeeccccccccccc--cccccccceeeeeccCCCE---EEEEeCCCeEEEEECCCCCEEEEEEecCCc--c
Confidence            35799999999999998666654  23333334444   44555   899999999999999999988887765521  2


Q ss_pred             CeEEEEEcC-CCCEEEEecCCCeEEEcC
Q psy17135         80 SILDVAFHP-SKPFIASAGADGLAKVFV  106 (106)
Q Consensus        80 ~v~~~~~~~-~~~~~~s~~~d~~i~iwd  106 (106)
                      .+..+++.+ ....+++++.|+.|++||
T Consensus       297 ~~~~~~~~~~~~~~l~s~s~dg~i~vwd  324 (325)
T d1pgua1         297 GNQQVGVVATGNGRIISLSLDGTLNFYE  324 (325)
T ss_dssp             GGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred             cCeEEEEEECCCCEEEEEECCCEEEEEE
Confidence            233334333 234789999999999997

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=6.2e-15  Score=85.17  Aligned_cols=97  Identities=19%  Similarity=0.325  Sum_probs=77.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCC-----------------ceEEEeeCCCCcEEEeeCCCccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNI-----------------SLFDSRPGHDCSIRLWNLDNKTC   66 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~s~~~d~~v~iwd~~~~~~   66 (106)
                      ..|+.|++|++.+++....+..  +...+..+.+.|....                 +.++++++.|+.+++|+..++++
T Consensus       162 ~~d~~v~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~  239 (317)
T d1vyhc1         162 SNDQTVRVWVVATKECKAELRE--HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC  239 (317)
T ss_dssp             ETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred             eCCCeEEEEeeccceeeEEEec--CCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcE
Confidence            4689999999999887555443  2333344444443221                 12368899999999999999999


Q ss_pred             hheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         67 VQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +..+.+|.    ..|.++.++|++.+|++++.|+.|++||
T Consensus       240 ~~~~~~~~----~~v~~~~~~~~~~~l~s~~~dg~i~iwd  275 (317)
T d1vyhc1         240 LMTLVGHD----NWVRGVLFHSGGKFILSCADDKTLRVWD  275 (317)
T ss_dssp             EEEEECCS----SCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred             EEEEeCCC----CCEEEEEECCCCCEEEEEECCCeEEEEE
Confidence            99999888    8999999999999999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=5.4e-15  Score=88.35  Aligned_cols=95  Identities=16%  Similarity=0.263  Sum_probs=80.1

Q ss_pred             CCceEEEEeCccCceeeecccC----------------CCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh
Q psy17135          5 PSSVIYIWTLLELQTYARNDCP----------------ELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ   68 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~   68 (106)
                      .|++|++||+.+++.+..+...                .+...+.++.|+|.+..   +++|+.|+.|++|+...++.+.
T Consensus        81 ~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~---l~s~~~dg~v~i~~~~~~~~~~  157 (388)
T d1erja_          81 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF---LATGAEDRLIRIWDIENRKIVM  157 (388)
T ss_dssp             CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEE
T ss_pred             eCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCc---ceeccccccccccccccccccc
Confidence            4899999999998876554332                12333556889998777   8999999999999999999888


Q ss_pred             eeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         69 EITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        69 ~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ...+|.    ..|.++.+++++..+++++.++.+++||
T Consensus       158 ~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~i~~~d  191 (388)
T d1erja_         158 ILQGHE----QDIYSLDYFPSGDKLVSGSGDRTVRIWD  191 (388)
T ss_dssp             EECCCS----SCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cccccc----ccccccccccccccccccccceeeeeee
Confidence            888888    8999999999999999999999999996

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2e-15  Score=86.55  Aligned_cols=91  Identities=13%  Similarity=0.196  Sum_probs=67.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc---------cchheeccc
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK---------TCVQEITAH   73 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~---------~~~~~~~~~   73 (106)
                      ...|++|++||+++.+.+......  ..  ....+.+....   +++++.|+.|++||+...         .++..+.+|
T Consensus       194 ~~~dg~i~i~d~~~~~~~~~~~~~--~~--~v~~~~~~~~~---l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H  266 (293)
T d1p22a2         194 GSSDNTIRLWDIECGACLRVLEGH--EE--LVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH  266 (293)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCC--SS--CEEEEECCSSE---EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred             ecCCCEEEEEecccceeeeeeccc--ce--eeeeccccceE---EEEEcCCCEEEEEECCCCccccccCCceeeEEecCC
Confidence            356899999999998876555432  21  22234444444   799999999999997543         234556677


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .    ..|.+++|+  +.+|+||+.|++|++||
T Consensus       267 ~----~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         267 S----GRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             S----SCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             C----CCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            7    889999985  56799999999999998

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.56  E-value=2.5e-14  Score=86.35  Aligned_cols=99  Identities=11%  Similarity=0.143  Sum_probs=68.8

Q ss_pred             CCCceEEEEeCccCcee---------------e-ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch
Q psy17135          4 VPSSVIYIWTLLELQTY---------------A-RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV   67 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~   67 (106)
                      ..|+++++||+......               . ......+...+.++.|+|.+ .   +++|+.|+.|++||+.+++++
T Consensus       143 ~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~---lasgs~Dg~i~iwd~~~~~~~  218 (393)
T d1sq9a_         143 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L---IATGFNNGTVQISELSTLRPL  218 (393)
T ss_dssp             ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E---EEEECTTSEEEEEETTTTEEE
T ss_pred             cCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-E---EEEEeCCCcEEEEeecccccc
Confidence            35899999998532110               0 01111133345667887764 3   799999999999999998776


Q ss_pred             heecccc--ccCCCCeEEEEEcCCCCEEEEecCCCe---EEEcC
Q psy17135         68 QEITAHR--KKFDESILDVAFHPSKPFIASAGADGL---AKVFV  106 (106)
Q Consensus        68 ~~~~~~~--~~~~~~v~~~~~~~~~~~~~s~~~d~~---i~iwd  106 (106)
                      ..+....  ..|...|.+++|+|++.+|++|+.|++   +++||
T Consensus       219 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd  262 (393)
T d1sq9a_         219 YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE  262 (393)
T ss_dssp             EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred             cccccccccccccceEEEcccccccceeeeecCCCCcceeeecc
Confidence            5543211  112289999999999999999998874   88885

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=7e-15  Score=85.84  Aligned_cols=83  Identities=17%  Similarity=0.294  Sum_probs=65.1

Q ss_pred             EeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC
Q psy17135         12 WTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP   91 (106)
Q Consensus        12 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   91 (106)
                      |+..+.++...+..  |...+.++ +.+.+..   |+||+.|++|++||+.++++++.+.+|.    ..|.+++|+|+  
T Consensus         1 W~~~~~~~~~~l~G--H~~~V~s~-~~~~g~~---l~sgs~Dg~i~vWd~~~~~~~~~~~~h~----~~V~~v~~~~~--   68 (342)
T d2ovrb2           1 WRRGELKSPKVLKG--HDDHVITC-LQFCGNR---IVSGSDDNTLKVWSAVTGKCLRTLVGHT----GGVWSSQMRDN--   68 (342)
T ss_dssp             HHHSCCCCCEEEEC--STTSCEEE-EEEETTE---EEEEETTSCEEEEETTTCCEEEECCCCS----SCEEEEEEETT--
T ss_pred             CCCCCCCcCEEECC--cCCceEEE-EEECCCE---EEEEeCCCeEEEEECCCCCEEEEEeCCC----CCEEEEEeCCC--
Confidence            45555555333443  45445443 5566665   8999999999999999999999999998    89999999975  


Q ss_pred             EEEEecCCCeEEEcC
Q psy17135         92 FIASAGADGLAKVFV  106 (106)
Q Consensus        92 ~~~s~~~d~~i~iwd  106 (106)
                      .+++++.|+.+++|+
T Consensus        69 ~l~s~s~D~~~~~~~   83 (342)
T d2ovrb2          69 IIISGSTDRTLKVWN   83 (342)
T ss_dssp             EEEEEETTSCEEEEE
T ss_pred             ccccceecccccccc
Confidence            899999999999985

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=4.6e-15  Score=90.58  Aligned_cols=94  Identities=13%  Similarity=-0.084  Sum_probs=73.3

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe--ec---cccccC
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE--IT---AHRKKF   77 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~--~~---~~~~~~   77 (106)
                      ...||+|++||+.+++.+..+...  . .+..+.|+|++..   +++++.|+++++||+.+++....  +.   .|.   
T Consensus        38 ~~~dg~v~vwD~~t~~~~~~l~~g--~-~~~~vafSPDGk~---l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~---  108 (426)
T d1hzua2          38 LRDAGQIALVDGDSKKIVKVIDTG--Y-AVHISRMSASGRY---LLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR---  108 (426)
T ss_dssp             ETTTTEEEEEETTTCSEEEEEECC--S-SEEEEEECTTSCE---EEEEETTSEEEEEETTSSSCEEEEEEECCSEEE---
T ss_pred             EcCCCEEEEEECCCCcEEEEEeCC--C-CeeEEEECCCCCE---EEEEeCCCCEEEEEccCCceeEEEEEeCCCCCc---
Confidence            357999999999999998777652  2 4667899999988   78899999999999998875432  22   333   


Q ss_pred             CCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         78 DESILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        78 ~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                       ..+.+++|+||++++ +++..++.+++||
T Consensus       109 -~~~~s~~~spDG~~l~v~~~~~~~v~i~d  137 (426)
T d1hzua2         109 -SVESSKFKGYEDRYTIAGAYWPPQFAIMD  137 (426)
T ss_dssp             -EEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred             -ceEEeeeecCCCCEEEEeecCCCeEEEEc
Confidence             556677888999986 5556889999986

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=3.9e-14  Score=81.90  Aligned_cols=94  Identities=16%  Similarity=0.266  Sum_probs=72.7

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh-eeccccccCCCCeEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ-EITAHRKKFDESILD   83 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~   83 (106)
                      .++.+++|++...+........ +...+..+.|+|.+..   |++++.|+.|++||+.+++... .+..|.    ..|.+
T Consensus       139 ~~~~v~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~---l~~g~~dg~i~i~d~~~~~~~~~~~~~h~----~~v~~  210 (287)
T d1pgua2         139 EGNTIQVFKLSDLEVSFDLKTP-LRAKPSYISISPSETY---IAAGDVMGKILLYDLQSREVKTSRWAFRT----SKINA  210 (287)
T ss_dssp             TTSCEEEEETTEEEEEEECSSC-CSSCEEEEEECTTSSE---EEEEETTSCEEEEETTTTEEEECCSCCCS----SCEEE
T ss_pred             ccceeeeeeccccceeeeeeec-cCCceeEEEeccCccc---cccccccccccceeecccccccccccccc----cccce
Confidence            3467999999876654443332 2334566889998877   8999999999999999887543 456676    78999


Q ss_pred             EEEcCC----------CCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPS----------KPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~----------~~~~~s~~~d~~i~iwd  106 (106)
                      ++|+|.          +.++++|+.|++|++||
T Consensus       211 ~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~  243 (287)
T d1pgua2         211 ISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS  243 (287)
T ss_dssp             EEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred             eeecccccccccccCCCCeeEeecCCCeEEEEE
Confidence            999874          46899999999999996

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.52  E-value=5.5e-15  Score=90.76  Aligned_cols=95  Identities=13%  Similarity=-0.082  Sum_probs=74.7

Q ss_pred             CcCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccch--heec---ccccc
Q psy17135          2 QKVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCV--QEIT---AHRKK   76 (106)
Q Consensus         2 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~--~~~~---~~~~~   76 (106)
                      +..+||+|.+||.++++.+..+...  . .+..+.|+|++..   +++++.|+.+++||+.+++..  ..+.   .|.  
T Consensus        37 ~~~d~g~v~v~D~~t~~v~~~~~~g--~-~~~~v~fSpDG~~---l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~--  108 (432)
T d1qksa2          37 TLRDAGQIALIDGSTYEIKTVLDTG--Y-AVHISRLSASGRY---LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR--  108 (432)
T ss_dssp             EETTTTEEEEEETTTCCEEEEEECS--S-CEEEEEECTTSCE---EEEEETTSEEEEEETTSSSCCEEEEEECCSEEE--
T ss_pred             EEcCCCEEEEEECCCCcEEEEEeCC--C-CeeEEEECCCCCE---EEEEcCCCCEEEEEeeCCCceEEEEEecCCCCC--
Confidence            3467999999999999998887652  2 4667899999988   788899999999999887642  2222   333  


Q ss_pred             CCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                        ..+....|+|||+++ ++++.++++++||
T Consensus       109 --~~~~s~~~SpDG~~l~vs~~~~~~v~i~d  137 (432)
T d1qksa2         109 --SIETSKMEGWEDKYAIAGAYWPPQYVIMD  137 (432)
T ss_dssp             --EEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred             --CeEEecccCCCCCEEEEEcCCCCeEEEEe
Confidence              456666788999975 7888899999996

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.1e-13  Score=80.97  Aligned_cols=92  Identities=15%  Similarity=0.231  Sum_probs=77.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..|+.|++||+.+++.+......  ........+.|.+..   +++++.|+.+++||.+++.++..+.+|.    ..|.+
T Consensus       178 ~~d~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~d~~i~i~d~~~~~~~~~~~~h~----~~v~~  248 (355)
T d1nexb2         178 SYDNTLIVWDVAQMKCLYILSGH--TDRIYSTIYDHERKR---CISASMDTTIRIWDLENGELMYTLQGHT----ALVGL  248 (355)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCC--SSCEEEEEEETTTTE---EEEEETTSCEEEEETTTCCEEEEECCCS----SCCCE
T ss_pred             cccceeeeeecccccceeeeecc--cccccccccccccee---eecccccceEEeeecccccccccccccc----ccccc
Confidence            46789999999998886555442  334556778887777   7999999999999999999999999888    88999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEcC
Q psy17135         84 VAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++++  .++++++.|+.|++||
T Consensus       249 ~~~~~--~~l~~~~~dg~i~iwd  269 (355)
T d1nexb2         249 LRLSD--KFLVSAAADGSIRGWD  269 (355)
T ss_dssp             EEECS--SEEEEECTTSEEEEEE
T ss_pred             ccccc--ceeeeeeccccccccc
Confidence            98874  6899999999999996

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.9e-14  Score=80.30  Aligned_cols=61  Identities=18%  Similarity=0.341  Sum_probs=53.5

Q ss_pred             eeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         37 TIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        37 ~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.+.+..   |+||+.|++|++||+.++++++.+.+|.    ..|.+++|  ++.+|++|+.|+.+++|+
T Consensus        21 ~~~d~~~---l~sgs~Dg~i~vWd~~~~~~~~~l~~H~----~~V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2          21 LQYDDQK---IVSGLRDNTIKIWDKNTLECKRILTGHT----GSVLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             EECCSSE---EEEEESSSCEEEEESSSCCEEEEECCCS----SCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EEEcCCE---EEEEeCCCeEEEEECCCCcEEEEEecCC----CCEeeeec--ccceeecccccccccccc
Confidence            3455555   8999999999999999999999999998    89998876  577999999999999995

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=4.2e-14  Score=82.26  Aligned_cols=74  Identities=14%  Similarity=0.082  Sum_probs=59.8

Q ss_pred             CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchhe---eccccccCCCCeEEEEEcCC-CCEEEEecCCCe
Q psy17135         26 PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQE---ITAHRKKFDESILDVAFHPS-KPFIASAGADGL  101 (106)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~  101 (106)
                      +.|...+..+.|+|.+..   |++++.|++|++||++++.....   ...|.    ..|.+++|+|+ +..+++|+.|+.
T Consensus         8 ~~h~d~I~~l~fsp~~~~---L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~----~~V~~v~f~~~~~~~l~sg~~d~~   80 (342)
T d1yfqa_           8 QAPKDYISDIKIIPSKSL---LLITSWDGSLTVYKFDIQAKNVDLLQSLRYK----HPLLCCNFIDNTDLQIYVGTVQGE   80 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTE---EEEEETTSEEEEEEEETTTTEEEEEEEEECS----SCEEEEEEEESSSEEEEEEETTSC
T ss_pred             CCCCCCEEEEEEeCCCCE---EEEEECCCeEEEEEccCCCcceEEEEecCCC----CCEEEEEEeCCCCCEEEEcccccc
Confidence            345666788999998887   89999999999999977654322   23466    89999999986 457999999999


Q ss_pred             EEEcC
Q psy17135        102 AKVFV  106 (106)
Q Consensus       102 i~iwd  106 (106)
                      +++|+
T Consensus        81 v~~w~   85 (342)
T d1yfqa_          81 ILKVD   85 (342)
T ss_dssp             EEEEC
T ss_pred             eeeee
Confidence            99996

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.44  E-value=3.5e-13  Score=78.31  Aligned_cols=99  Identities=11%  Similarity=0.002  Sum_probs=72.5

Q ss_pred             cCCCceEEEEeCccCceeeeccc-CCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDC-PELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v   81 (106)
                      ...|++|+|||+.++.....+.. ..|...+.++.|.|.+...  +++|+.|+.|++|+...+........+..   ...
T Consensus        29 ~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~--l~sg~~d~~v~~w~~~~~~~~~~~~~~~~---~~~  103 (342)
T d1yfqa_          29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ--IYVGTVQGEILKVDLIGSPSFQALTNNEA---NLG  103 (342)
T ss_dssp             EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEE--EEEEETTSCEEEECSSSSSSEEECBSCCC---CSC
T ss_pred             EECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCE--EEEcccccceeeeeccccccccccccccc---ccc
Confidence            45799999999987654222221 1245567778999876543  78999999999999988776555544441   344


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         82 LDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ....+.++...+++++.++++++||
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~wd  128 (342)
T d1yfqa_         104 ICRICKYGDDKLIAASWDGLIEVID  128 (342)
T ss_dssp             EEEEEEETTTEEEEEETTSEEEEEC
T ss_pred             cccccccccccccccccccccceee
Confidence            5556677888999999999999997

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.41  E-value=1e-12  Score=77.44  Aligned_cols=90  Identities=6%  Similarity=0.013  Sum_probs=70.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCC--CcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHD--CSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      .+|.|++||+.++.....   . |...+..+.|+|++..   +++++.+  ..+++||.++++. ..+..|.    ..+.
T Consensus        22 ~~g~v~v~d~~~~~~~~~---~-~~~~v~~~~~spDg~~---l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~----~~v~   89 (360)
T d1k32a3          22 SRGQAFIQDVSGTYVLKV---P-EPLRIRYVRRGGDTKV---AFIHGTREGDFLGIYDYRTGKA-EKFEENL----GNVF   89 (360)
T ss_dssp             ETTEEEEECTTSSBEEEC---S-CCSCEEEEEECSSSEE---EEEEEETTEEEEEEEETTTCCE-EECCCCC----CSEE
T ss_pred             ECCeEEEEECCCCcEEEc---c-CCCCEEEEEECCCCCE---EEEEEcCCCCEEEEEECCCCcE-EEeeCCC----ceEE
Confidence            467899999998876332   2 3455777999998877   5554433  3789999988764 4555676    7999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +++|+|++.++++++.++.+++|+
T Consensus        90 ~~~~spdg~~l~~~~~~~~~~~~~  113 (360)
T d1k32a3          90 AMGVDRNGKFAVVANDRFEIMTVD  113 (360)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEE
T ss_pred             eeeecccccccceecccccccccc
Confidence            999999999999999999999985

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.31  E-value=1.3e-11  Score=71.02  Aligned_cols=94  Identities=15%  Similarity=0.107  Sum_probs=74.1

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|.+||+++++.+..+...   .....+.++|.+...  +++++.++.|++||+.+++.+..+..+.     ...
T Consensus         8 ~~~~~~v~v~D~~t~~~~~~i~~g---~~p~~va~spdG~~l--~v~~~~~~~i~v~d~~t~~~~~~~~~~~-----~~~   77 (301)
T d1l0qa2           8 NSESDNISVIDVTSNKVTATIPVG---SNPMGAVISPDGTKV--YVANAHSNDVSIIDTATNNVIATVPAGS-----SPQ   77 (301)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEECS---SSEEEEEECTTSSEE--EEEEGGGTEEEEEETTTTEEEEEEECSS-----SEE
T ss_pred             ECCCCEEEEEECCCCeEEEEEECC---CCceEEEEeCCCCEE--EEEECCCCEEEEEECCCCceeeeeeccc-----ccc
Confidence            357899999999999987776653   235568899988773  4678889999999999999888887664     678


Q ss_pred             EEEEcCCCCE-EEEecCCCeEEEcC
Q psy17135         83 DVAFHPSKPF-IASAGADGLAKVFV  106 (106)
Q Consensus        83 ~~~~~~~~~~-~~s~~~d~~i~iwd  106 (106)
                      .+.+++++.. ++++..+..+.+|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~  102 (301)
T d1l0qa2          78 GVAVSPDGKQVYVTNMASSTLSVID  102 (301)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ccccccccccccccccccceeeecc
Confidence            8999998886 55666777777764

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.30  E-value=1.3e-11  Score=72.00  Aligned_cols=95  Identities=11%  Similarity=0.072  Sum_probs=71.8

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc-CCCCe
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK-FDESI   81 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~v   81 (106)
                      ...|++|++||+++++.+..+..+.+......+.++|++...  +++++.++.|.+||+.+++.+..+..+... +...+
T Consensus         7 ~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l--~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~   84 (337)
T d1pbyb_           7 PARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIA--YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL   84 (337)
T ss_dssp             EETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEE--EEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred             EcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEE--EEEECCCCeEEEEECCCCcEEEEEecCCCcccccce
Confidence            356899999999999998877765444456678899988763  467888999999999999988777655410 01244


Q ss_pred             EEEEEcCCCCEEEEecCC
Q psy17135         82 LDVAFHPSKPFIASAGAD   99 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~~d   99 (106)
                      ..++|+|++..++.+..+
T Consensus        85 ~~v~~s~dg~~l~~~~~~  102 (337)
T d1pbyb_          85 FGAALSPDGKTLAIYESP  102 (337)
T ss_dssp             TCEEECTTSSEEEEEEEE
T ss_pred             eeEEEcCCCcEEEEeecC
Confidence            578999999998877643

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.23  E-value=1.8e-11  Score=74.50  Aligned_cols=57  Identities=19%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             eEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         45 LFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        45 ~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++++.+.|++|++||+.+++.+..+..+.     .+..++|||||+.+++++.|+++++||
T Consensus        33 ~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-----~~~~vafSPDGk~l~~~~~d~~v~vwd   89 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDSKKIVKVIDTGY-----AVHISRMSASGRYLLVIGRDARIDMID   89 (426)
T ss_dssp             EEEEEETTTTEEEEEETTTCSEEEEEECCS-----SEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCC-----CeeEEEECCCCCEEEEEeCCCCEEEEE
Confidence            346889999999999999999999998764     689999999999999999999999996

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=3.8e-11  Score=70.07  Aligned_cols=100  Identities=10%  Similarity=0.117  Sum_probs=67.4

Q ss_pred             cCCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeE
Q psy17135          3 KVPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESIL   82 (106)
Q Consensus         3 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~   82 (106)
                      ...|++|++||+.+...+.......+...+..+.|+|++...  ++++..|+.|++|++........+..+.. ....+.
T Consensus        10 ~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L--~v~~~~d~~i~~~~i~~~~~~~~~~~~~~-~~~~p~   86 (333)
T d1ri6a_          10 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYL--YVGVRPEFRVLAYRIAPDDGALTFAAESA-LPGSLT   86 (333)
T ss_dssp             EGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEE--EEEETTTTEEEEEEECTTTCCEEEEEEEE-CSSCCS
T ss_pred             CCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEE--EEEECCCCeEEEEEEeCCCCcEEEeeecc-cCCCce
Confidence            457899999999765443333322234456778999998873  36677789999999987654333322211 014567


Q ss_pred             EEEEcCCCCEEEEecC-CCeEEEc
Q psy17135         83 DVAFHPSKPFIASAGA-DGLAKVF  105 (106)
Q Consensus        83 ~~~~~~~~~~~~s~~~-d~~i~iw  105 (106)
                      .++|+|+++++++++. ++.+.+|
T Consensus        87 ~l~~spDg~~l~v~~~~~~~v~~~  110 (333)
T d1ri6a_          87 HISTDHQGQFVFVGSYNAGNVSVT  110 (333)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEE
T ss_pred             EEEEcCCCCEEeecccCCCceeee
Confidence            8999999999887774 5667665

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.21  E-value=2.2e-11  Score=71.62  Aligned_cols=81  Identities=12%  Similarity=-0.007  Sum_probs=65.8

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAF   86 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~   86 (106)
                      ..|++||+.+++... +  ..+...+..+.|+|.+..   +++++.++.+++|++.+++....+..+.    ..+.+++|
T Consensus        66 ~~v~v~d~~~~~~~~-~--~~~~~~v~~~~~spdg~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  135 (360)
T d1k32a3          66 DFLGIYDYRTGKAEK-F--EENLGNVFAMGVDRNGKF---AVVANDRFEIMTVDLETGKPTVIERSRE----AMITDFTI  135 (360)
T ss_dssp             EEEEEEETTTCCEEE-C--CCCCCSEEEEEECTTSSE---EEEEETTSEEEEEETTTCCEEEEEECSS----SCCCCEEE
T ss_pred             CEEEEEECCCCcEEE-e--eCCCceEEeeeecccccc---cceeccccccccccccccceeeeeeccc----ccccchhh
Confidence            479999999887632 2  224555677899999888   8999999999999999998887777777    78899999


Q ss_pred             cCCCCEEEEec
Q psy17135         87 HPSKPFIASAG   97 (106)
Q Consensus        87 ~~~~~~~~s~~   97 (106)
                      +|++++++.++
T Consensus       136 spdg~~la~~~  146 (360)
T d1k32a3         136 SDNSRFIAYGF  146 (360)
T ss_dssp             CTTSCEEEEEE
T ss_pred             ccceeeeeeec
Confidence            99999987543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.15  E-value=3e-10  Score=66.23  Aligned_cols=91  Identities=12%  Similarity=0.057  Sum_probs=66.7

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccccc--CCCCe
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKK--FDESI   81 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~--~~~~v   81 (106)
                      ..|++|.+||+++++.+..+..++. .....+.|+|++...  ++++..++.|.+||+.+++.+..+......  ....+
T Consensus        15 ~~~~~v~v~D~~t~~~~~t~~~~~~-~~p~~l~~spDG~~l--~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~   91 (346)
T d1jmxb_          15 NYPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTA--YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSM   91 (346)
T ss_dssp             ETTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECS
T ss_pred             cCCCEEEEEECCCCCEEEEEEcCCC-CCcceEEECCCCCEE--EEEECCCCcEEEEeCccCeeeeeecccccccccCCce
Confidence            4688999999999998777665432 245678899988874  477888999999999999877665432210  00234


Q ss_pred             EEEEEcCCCCEEEEec
Q psy17135         82 LDVAFHPSKPFIASAG   97 (106)
Q Consensus        82 ~~~~~~~~~~~~~s~~   97 (106)
                      ..++|+|++..++.++
T Consensus        92 ~~v~~s~DG~~l~v~~  107 (346)
T d1jmxb_          92 YSFAISPDGKEVYATV  107 (346)
T ss_dssp             SCEEECTTSSEEEEEE
T ss_pred             EEEEEecCCCEEEEEe
Confidence            5789999999887665

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.09  E-value=1.2e-09  Score=62.72  Aligned_cols=94  Identities=9%  Similarity=0.049  Sum_probs=66.2

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.+.+|+....+.......   ........+.+.+....+......++.|++||..+++.+..+..+     ..+..+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-----~~~~~v  249 (301)
T d1l0qa2         178 DSMSISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-----PDPAGI  249 (301)
T ss_dssp             TTTEEEEEETTTTEEEEEEEC---SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-----SSEEEE
T ss_pred             cccccccccccceeeeecccc---cCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-----CCEEEE
Confidence            345667777776665444433   223455677777776422223355678999999999888777654     478999


Q ss_pred             EEcCCCCEE-EEecCCCeEEEcC
Q psy17135         85 AFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                      +|+|+++.+ ++++.+++|++||
T Consensus       250 a~spdg~~l~va~~~~~~i~v~D  272 (301)
T d1l0qa2         250 AVTPDGKKVYVALSFCNTVSVID  272 (301)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEeCCCCEEEEEECCCCeEEEEE
Confidence            999999975 7888899999996

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.08  E-value=2.5e-10  Score=69.90  Aligned_cols=57  Identities=14%  Similarity=0.130  Sum_probs=51.8

Q ss_pred             eEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         45 LFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        45 ~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      .++++.+.+++|.+||..++++++.+..+.     .+..++|||||+++++++.|+++++||
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-----~~~~v~fSpDG~~l~~~s~dg~v~~~d   89 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGY-----AVHISRLSASGRYLFVIGRDGKVNMID   89 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECSS-----CEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCC-----CeeEEEECCCCCEEEEEcCCCCEEEEE
Confidence            336899999999999999999999998664     689999999999999999999999996

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.04  E-value=7.9e-10  Score=64.21  Aligned_cols=90  Identities=10%  Similarity=0.043  Sum_probs=64.6

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      ++.+.+||+.++......... +........+.+....   ++.+  ++.+++||+.+++.+..+. +.    ..+.+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~--~~~i~v~d~~~~~~~~~~~-~~----~~~~~~~  286 (337)
T d1pbyb_         218 RTGLLTMDLETGEMAMREVRI-MDVFYFSTAVNPAKTR---AFGA--YNVLESFDLEKNASIKRVP-LP----HSYYSVN  286 (337)
T ss_dssp             EEEEEEEETTTCCEEEEEEEE-CSSCEEEEEECTTSSE---EEEE--ESEEEEEETTTTEEEEEEE-CS----SCCCEEE
T ss_pred             CccEEEEEcCCCcEEEEEecC-CCcceEEEEecccceE---EEEc--cccEEEEECCCCcEEEEEc-CC----CCEEEEE
Confidence            456888998887764333222 1222333455555544   3333  5789999999999888775 33    5788999


Q ss_pred             EcCCCCEEEEecCCCeEEEcC
Q psy17135         86 FHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        86 ~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      |+|++..+++++.++.|++||
T Consensus       287 ~s~dG~~l~v~~~~~~i~v~D  307 (337)
T d1pbyb_         287 VSTDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             ECTTSCEEEEESBSSEEEEEE
T ss_pred             ECCCCCEEEEEeCCCcEEEEE
Confidence            999999999999999999997

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.02  E-value=6.9e-10  Score=64.68  Aligned_cols=92  Identities=11%  Similarity=-0.062  Sum_probs=68.4

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .++.+.+||+.++.........+ ......+.+.+.+..   ++... ++.+.+||..+++.+..+. +.    ..+.++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~-~~~v~v~d~~~~~~~~~~~-~~----~~~~~v  297 (346)
T d1jmxb_         228 LLYGYLSVDLKTGKTHTQEFADL-TELYFTGLRSPKDPN---QIYGV-LNRLAKYDLKQRKLIKAAN-LD----HTYYCV  297 (346)
T ss_dssp             EEEEEEEEETTTCCEEEEEEEEC-SSCEEEEEECSSCTT---EEEEE-ESEEEEEETTTTEEEEEEE-CS----SCCCEE
T ss_pred             CCceEEEEECCCCceEEEEeecc-cceeEEEEEeCCCCE---EEEec-CCeEEEEECCCCcEEEEEc-CC----CCEEEE
Confidence            34568889998887654443322 223455677777776   45554 3579999999998887775 33    468899


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +|+||++.+++++.|+.|++||
T Consensus       298 a~s~DG~~l~v~~~d~~v~v~D  319 (346)
T d1jmxb_         298 AFDKKGDKLYLGGTFNDLAVFN  319 (346)
T ss_dssp             EECSSSSCEEEESBSSEEEEEE
T ss_pred             EEcCCCCEEEEEeCCCcEEEEE
Confidence            9999999999999999999997

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.79  E-value=3.5e-08  Score=60.35  Aligned_cols=93  Identities=10%  Similarity=0.029  Sum_probs=67.5

Q ss_pred             CCceEEEEeCccCceeeeccc---CCCCCCCCeeEeeeCCCCceEEEee---------CCCCcEEEeeCCCccchheecc
Q psy17135          5 PSSVIYIWTLLELQTYARNDC---PELNSEPPACQTIPSSNISLFDSRP---------GHDCSIRLWNLDNKTCVQEITA   72 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~---------~~d~~v~iwd~~~~~~~~~~~~   72 (106)
                      .|+.+.+||+.+++....+..   ..+...+....|+|++..   ++.+         +.++.+.+||+.+++ +..+..
T Consensus        34 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~---i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~  109 (470)
T d2bgra1          34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF---ILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEER  109 (470)
T ss_dssp             SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSE---EEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSC
T ss_pred             cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCE---EEEEECCcceeeeccCceEEEEECCCCc-cccccc
Confidence            467899999999987443322   223345677889999887   4444         345678899999887 455666


Q ss_pred             ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         73 HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        73 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      +.    ..+..+.|||||..++... ++.+.+|+
T Consensus       110 ~~----~~~~~~~~SPDG~~ia~~~-~~~l~~~~  138 (470)
T d2bgra1         110 IP----NNTQWVTWSPVGHKLAYVW-NNDIYVKI  138 (470)
T ss_dssp             CC----TTEEEEEECSSTTCEEEEE-TTEEEEES
T ss_pred             CC----ccccccccccCcceeeEee-cccceEEE
Confidence            77    7899999999999988864 56666653

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.75  E-value=9.3e-09  Score=60.32  Aligned_cols=98  Identities=5%  Similarity=-0.109  Sum_probs=61.8

Q ss_pred             CCCceEEEEeCccCceeeecccCC----------CCCCCCeeEeeeCCCCceEEEe-------eCCCCcEEEeeCCCccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPE----------LNSEPPACQTIPSSNISLFDSR-------PGHDCSIRLWNLDNKTC   66 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s-------~~~d~~v~iwd~~~~~~   66 (106)
                      ..++.+.+|++..++.........          .......+.+.+.+....+...       ......|.+||..+++.
T Consensus       213 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~  292 (355)
T d2bbkh_         213 TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER  292 (355)
T ss_dssp             BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred             cCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcE
Confidence            468899999998766421111110          0112233555665555211000       11224689999999988


Q ss_pred             hheeccccccCCCCeEEEEEcCCCC--EEEEecCCCeEEEcC
Q psy17135         67 VQEITAHRKKFDESILDVAFHPSKP--FIASAGADGLAKVFV  106 (106)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~~~~~~--~~~s~~~d~~i~iwd  106 (106)
                      +..+...     ..+.+++|+|+++  ++++++.|+.|++||
T Consensus       293 ~~~~~~~-----~~~~~~a~spDG~~~l~v~~~~d~~i~v~D  329 (355)
T d2bbkh_         293 LAKFEMG-----HEIDSINVSQDEKPLLYALSTGDKTLYIHD  329 (355)
T ss_dssp             EEEEEEE-----EEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             EEEecCC-----CCEEEEEEcCCCCeEEEEEECCCCEEEEEE
Confidence            8777644     3678999999987  467788899999997

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.72  E-value=9.9e-09  Score=59.58  Aligned_cols=57  Identities=11%  Similarity=0.215  Sum_probs=43.5

Q ss_pred             EEEeeCCCCcEEEeeCCCccchhee--ccccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         46 FDSRPGHDCSIRLWNLDNKTCVQEI--TAHRKKFDESILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        46 ~~~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                      ++++++.+++|++|+++....+..+  ..+.    ..+..++|+||+++| +++..|+.|++|+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~----~~v~~la~spDG~~L~v~~~~d~~i~~~~   65 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVP----GQVQPMVVSPDKRYLYVGVRPEFRVLAYR   65 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECS----SCCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCC----CCEeEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            3588899999999999765433333  2455    788999999999987 5555689999884

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.67  E-value=3.3e-07  Score=54.01  Aligned_cols=55  Identities=4%  Similarity=-0.101  Sum_probs=45.4

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCE--EEEecCCCeEEEcC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPF--IASAGADGLAKVFV  106 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~s~~~d~~i~iwd  106 (106)
                      +++...++.+.+||..+++.+..+. +.    ..+..++|+||++.  +++++.|++|++||
T Consensus       291 ~~~~~~~~~v~~~d~~t~~~~~~~~-~~----~~~~~~a~spDG~~~l~vt~~~d~~v~v~D  347 (373)
T d2madh_         291 WKLHAAAKEVTSVTGLVGQTSSQIS-LG----HDVDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             EEeecCCCeEEEEECCCCcEEEEec-CC----CCeeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence            3566777889999999999888775 33    57889999999984  57899999999997

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.59  E-value=2.4e-07  Score=54.61  Aligned_cols=77  Identities=9%  Similarity=-0.047  Sum_probs=58.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ..++.+.+||+.+++.+..+..   ......+.|+|++.... +++++.|+.|++||..+++.++.+..+.    .....
T Consensus       295 ~~~~~v~~~d~~t~~~~~~~~~---~~~~~~~a~spDG~~~l-~vt~~~d~~v~v~D~~tg~~~~~~~~~g----~~P~~  366 (373)
T d2madh_         295 AAAKEVTSVTGLVGQTSSQISL---GHDVDAISVAQDGGPDL-YALSAGTEVLHIYDAGAGDQDQSTVELG----SGPQV  366 (373)
T ss_pred             cCCCeEEEEECCCCcEEEEecC---CCCeeEEEECCCCCEEE-EEEeCCCCeEEEEECCCCCEEEEECCCC----CCCcE
Confidence            3467899999999998666554   23456788999887532 4789999999999999999999988665    45555


Q ss_pred             EEEcC
Q psy17135         84 VAFHP   88 (106)
Q Consensus        84 ~~~~~   88 (106)
                      +++..
T Consensus       367 l~~~~  371 (373)
T d2madh_         367 LSVMN  371 (373)
T ss_pred             EEEec
Confidence            55543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.50  E-value=2.1e-07  Score=54.41  Aligned_cols=66  Identities=8%  Similarity=0.038  Sum_probs=50.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheecccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHR   74 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~   74 (106)
                      ....|.+||..+++.+..+...   .....+.|+|.+.... ++++..|+.|.+||.++++.++.+..+.
T Consensus       278 ~~~~v~v~d~~t~~~~~~~~~~---~~~~~~a~spDG~~~l-~v~~~~d~~i~v~D~~tg~~~~~i~~~G  343 (355)
T d2bbkh_         278 ASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLL-YALSTGDKTLYIHDAESGEELRSVNQLG  343 (355)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEE-EEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred             CCCeEEEEeCCCCcEEEEecCC---CCEEEEEEcCCCCeEE-EEEECCCCEEEEEECCCCCEEEEEeCcC
Confidence            3468999999999886665542   2356788999876432 4788889999999999999998887554

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.48  E-value=3.4e-07  Score=54.29  Aligned_cols=97  Identities=5%  Similarity=-0.137  Sum_probs=64.8

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEE-------EeeCCCCcEEEeeCCCccchheeccccccC-
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFD-------SRPGHDCSIRLWNLDNKTCVQEITAHRKKF-   77 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~-   77 (106)
                      +..|.+||..+++.+......  .  .....++|++....+.       ++|+.|+.|.+||..+++++..+..+.... 
T Consensus        45 ~~~~~~~d~~~~~~~~~~~~~--~--~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~  120 (368)
T d1mdah_          45 TTENWVSCAGCGVTLGHSLGA--F--LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF  120 (368)
T ss_dssp             SEEEEEEETTTTEEEEEEEEC--T--TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred             cceEEEEeCCCCcEEEEEeCC--C--CCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCcccee
Confidence            345777799999886665542  2  3357788988773210       013557789999999998887776543100 


Q ss_pred             --CCCeEEEEEcCCCCEEEEec-CCCeEEEcC
Q psy17135         78 --DESILDVAFHPSKPFIASAG-ADGLAKVFV  106 (106)
Q Consensus        78 --~~~v~~~~~~~~~~~~~s~~-~d~~i~iwd  106 (106)
                        ......++|+||+++++.+. .++.+.+||
T Consensus       121 ~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d  152 (368)
T d1mdah_         121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLS  152 (368)
T ss_dssp             CBSCCTTSEEECTTSSCEEEEECSSSCEEEEE
T ss_pred             cccCCccceEECCCCCEEEEEeCCCCeEEEEE
Confidence              02234689999999876654 678888885

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.11  E-value=4.4e-06  Score=49.40  Aligned_cols=48  Identities=4%  Similarity=-0.064  Sum_probs=38.8

Q ss_pred             CcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC--EEEEecCCCeEEEcC
Q psy17135         54 CSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP--FIASAGADGLAKVFV  106 (106)
Q Consensus        54 ~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~s~~~d~~i~iwd  106 (106)
                      ..+.+||..+++.+..+...     ..+..++|+||++  .++++..++.+++||
T Consensus       294 ~~v~v~D~~t~~~~~~~~~~-----~~~~~~a~spDG~~~ly~s~~~~~~v~v~D  343 (368)
T d1mdah_         294 ENTSSVTASVGQTSGPISNG-----HDSDAIIAAQDGASDNYANSAGTEVLDIYD  343 (368)
T ss_dssp             EEEEEEESSSCCEEECCEEE-----EEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             ceEEEEECCCCcEeEEecCC-----CceeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence            35889999999888777643     4678899999986  357788899999997

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.97  E-value=2.1e-05  Score=47.83  Aligned_cols=89  Identities=11%  Similarity=0.042  Sum_probs=58.3

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc---------
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK---------   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~---------   75 (106)
                      .++.+.+||+.+++.. .+.  .+........|+|++..   ++.. .++.+.+|+..+++..+.......         
T Consensus        90 ~~~~~~l~d~~~~~~~-~l~--~~~~~~~~~~~SPDG~~---ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d  162 (470)
T d2bgra1          90 YTASYDIYDLNKRQLI-TEE--RIPNNTQWVTWSPVGHK---LAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD  162 (470)
T ss_dssp             EEEEEEEEETTTTEEC-CSS--CCCTTEEEEEECSSTTC---EEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred             cCceEEEEECCCCccc-ccc--cCCccccccccccCcce---eeEe-ecccceEEECCCCceeeeeeccCCCcccccccc
Confidence            3577889999998852 222  23445667899999998   5554 467899999988865443322110         


Q ss_pred             -----cCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         76 -----KFDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        76 -----~~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                           ........+.||||++.++....|.
T Consensus       163 ~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~  192 (470)
T d2bgra1         163 WVYEEEVFSAYSALWWSPNGTFLAYAQFND  192 (470)
T ss_dssp             HHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred             eeeeeeecCCccccEECCCCCccceeEecC
Confidence                 0012345578999999998876553

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.15  E-value=0.0059  Score=34.55  Aligned_cols=93  Identities=9%  Similarity=0.128  Sum_probs=55.3

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEee-CCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRP-GHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      .+.|++||.. ++.+..+...........+...+.+..   +++- ..++.|.+|+. +|+.+..+.....  ......+
T Consensus       177 ~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i---~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~--~~~p~~v  249 (279)
T d1q7fa_         177 AHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEI---LIADNHNNFNLTIFTQ-DGQLISALESKVK--HAQCFDV  249 (279)
T ss_dssp             GTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCE---EEEECSSSCEEEEECT-TSCEEEEEEESSC--CSCEEEE
T ss_pred             ccceeeeecC-CceeeeecccccccCCcccccccCCeE---EEEECCCCcEEEEECC-CCCEEEEEeCCCC--CCCEeEE
Confidence            3456777754 444444432222223344566666653   4453 34557899985 5776666643321  1457889


Q ss_pred             EEcCCCCEEEEecCCCeEEEcC
Q psy17135         85 AFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        85 ~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ++.|++.++++. .+++|++|.
T Consensus       250 av~~dG~l~V~~-~n~~v~~fr  270 (279)
T d1q7fa_         250 ALMDDGSVVLAS-KDYRLYIYR  270 (279)
T ss_dssp             EEETTTEEEEEE-TTTEEEEEE
T ss_pred             EEeCCCcEEEEe-CCCeEEEEE
Confidence            999999866654 688998873

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.13  E-value=0.0017  Score=39.72  Aligned_cols=90  Identities=4%  Similarity=-0.029  Sum_probs=58.1

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCC-----------------cEEEeeCCCccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDC-----------------SIRLWNLDNKTC   66 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-----------------~v~iwd~~~~~~   66 (106)
                      ..++.|.++|+.+++.......+.. .....+.+.|.+....+ +..+++.                 .+..+|..+.+.
T Consensus        91 ~~~~rVavIDl~t~k~~~ii~iP~g-~gphgi~~spdg~t~YV-~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v  168 (441)
T d1qnia2          91 KANTRVARIRLDIMKTDKITHIPNV-QAIHGLRLQKVPKTNYV-FCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV  168 (441)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECTTC-CCEEEEEECCSSBCCEE-EEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE
T ss_pred             CCCCEEEEEECCCCcEeeEEecCCC-CCccceEEeccCCEEEE-EeccCCcccccCcccccccccccceEEeecCcccee
Confidence            3577899999999988665554422 24566888888776533 3333322                 123466666665


Q ss_pred             hheeccccccCCCCeEEEEEcCCCCEEEEecCCC
Q psy17135         67 VQEITAHRKKFDESILDVAFHPSKPFIASAGADG  100 (106)
Q Consensus        67 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~  100 (106)
                      ..++...     .....++++|+++++++.+.+.
T Consensus       169 ~~qI~v~-----~~p~~v~~spdGk~a~vt~~ns  197 (441)
T d1qnia2         169 AWQVIVD-----GNLDNTDADYTGKYATSTCYNS  197 (441)
T ss_dssp             EEEEEES-----SCCCCEEECSSSSEEEEEESCT
T ss_pred             eEEEecC-----CCccceEECCCCCEEEEEecCC
Confidence            5555543     3567889999999987776553

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.12  E-value=0.0034  Score=38.36  Aligned_cols=96  Identities=13%  Similarity=-0.003  Sum_probs=63.8

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccc--------hheecccccc
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTC--------VQEITAHRKK   76 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~--------~~~~~~~~~~   76 (106)
                      .++.+.+++....+.+.....  +. ....+..+|++.+.  ++++..+++|.+||+.+-..        ...+.++.. 
T Consensus       236 ~~~v~vvd~~~~~~v~~~IPv--gk-sPhGv~vSPDGkyl--~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~-  309 (441)
T d1qnia2         236 DSKVPVVDGRGESEFTRYIPV--PK-NPHGLNTSPDGKYF--IANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPE-  309 (441)
T ss_dssp             TCCCCEEECSSSCSSEEEECC--BS-SCCCEEECTTSCEE--EEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCB-
T ss_pred             CCCcEEEEcccCCceEEEEeC--CC-CccCceECCCCCEE--EEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecc-
Confidence            456777777766655444433  22 35668889998875  67899999999999865321        111212110 


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         77 FDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        77 ~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..-......|.+++..+.+.+-|..|..|+
T Consensus       310 ~glgplh~~fd~~g~~yts~~~ds~v~kw~  339 (441)
T d1qnia2         310 LGLGPLHTTFDGRGNAYTTLFIDSQVCKWN  339 (441)
T ss_dssp             CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred             cccCcccceecCCceEEEcccccceEEEec
Confidence            012345568999998899999999998884

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=96.95  E-value=0.0058  Score=35.37  Aligned_cols=55  Identities=13%  Similarity=0.109  Sum_probs=41.7

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCC-EEEEecCCCeEEEc
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKP-FIASAGADGLAKVF  105 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~i~iw  105 (106)
                      .++....+.|.+||.+.++....+..+.    ....+++|.|+++ ++++.+.++.|...
T Consensus       240 yVa~~~~g~I~~~dp~~g~~~~~i~~p~----~~~t~~afg~d~~~lyVt~~~~g~i~~~  295 (314)
T d1pjxa_         240 LVANWGSSHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTEHENNAVWKF  295 (314)
T ss_dssp             EEEEETTTEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             EEEEcCCCEEEEEeCCCCEEEEEEECCC----CCEEEEEEeCCCCEEEEEECCCCcEEEE
Confidence            4666567889999998887776676555    6788999999886 56777777877643

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.76  E-value=0.014  Score=34.09  Aligned_cols=83  Identities=8%  Similarity=0.171  Sum_probs=58.7

Q ss_pred             ceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheeccccccCCCCeEEEE
Q psy17135          7 SVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         7 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .+++++|+.+.+.+..+..+   ..+.-..|......+  ++|..   .|.-|+++.. .+.+.+.-|.......|....
T Consensus        83 ~~LQiFnletK~klks~~~~---e~VvfWkWis~~~L~--lVT~t---aVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~  154 (327)
T d1utca2          83 KTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLNTVA--LVTDN---AVYHWSMEGESQPVKMFDRHSSLAGCQIINYR  154 (327)
T ss_dssp             TEEEEEETTTTEEEEEEECS---SCCCEEEESSSSEEE--EECSS---EEEEEESSSSCCCEEEEECCGGGTTCEEEEEE
T ss_pred             CeEEEEehhHhhhhceEEcC---CCcEEEEecCCCEEE--EEcCC---ceEEEcccCCCCchhhhhhcccccCceEEEEE
Confidence            46899999999988888773   356778888877765  55554   6999999643 455566555543335677777


Q ss_pred             EcCCCCEEEEec
Q psy17135         86 FHPSKPFIASAG   97 (106)
Q Consensus        86 ~~~~~~~~~s~~   97 (106)
                      .+++++|++-.+
T Consensus       155 ~d~~~kW~~l~G  166 (327)
T d1utca2         155 TDAKQKWLLLTG  166 (327)
T ss_dssp             ECTTSCEEEEEE
T ss_pred             ECCCCCEEEEEe
Confidence            888899865543

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0081  Score=36.71  Aligned_cols=89  Identities=9%  Similarity=0.022  Sum_probs=51.1

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccc---------
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRK---------   75 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~---------   75 (106)
                      ..+.+.++|+.++...................|+|.+....|   .. ++.+.+.+..++...+....-..         
T Consensus        89 ~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iaf---v~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d  164 (465)
T d1xfda1          89 YTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIF---IF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD  164 (465)
T ss_dssp             CCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEE---EE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred             ccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEE---Ee-cceEEEEecCCCceEEEecccCcceeeccccc
Confidence            356788899998876333222222333445889999998433   22 45677777766544332221110         


Q ss_pred             -----cCCCCeEEEEEcCCCCEEEEec
Q psy17135         76 -----KFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        76 -----~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                           .....-..+.||||++.|+...
T Consensus       165 ~vyeee~~~~~~a~~WSPDgk~iaf~~  191 (465)
T d1xfda1         165 WLYEEEILKTHIAHWWSPDGTRLAYAA  191 (465)
T ss_dssp             HHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred             hhhhhhhccccceEEECCCCCeEEEEE
Confidence                 0001124677999999988765

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=96.55  E-value=0.009  Score=34.11  Aligned_cols=62  Identities=15%  Similarity=0.073  Sum_probs=43.9

Q ss_pred             eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEE
Q psy17135         34 ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKV  104 (106)
Q Consensus        34 ~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~i  104 (106)
                      .+.+.|++..   +++...+++|..++....  ...+....    ..+..++|.++++++++...++.+..
T Consensus        32 ~iAv~pdG~l---~vt~~~~~~I~~i~p~g~--~~~~~~~~----~~~~gla~~~dG~l~v~~~~~~~~~~   93 (302)
T d2p4oa1          32 NLASAPDGTI---FVTNHEVGEIVSITPDGN--QQIHATVE----GKVSGLAFTSNGDLVATGWNADSIPV   93 (302)
T ss_dssp             EEEECTTSCE---EEEETTTTEEEEECTTCC--EEEEEECS----SEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CEEECCCCCE---EEEeCCCCEEEEEeCCCC--EEEEEcCC----CCcceEEEcCCCCeEEEecCCceEEE
Confidence            4667777665   788888898888876533  22333344    67899999999998888776665544

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.45  E-value=0.024  Score=31.55  Aligned_cols=65  Identities=6%  Similarity=-0.020  Sum_probs=41.2

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheec-cccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEIT-AHRKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ..+.+.+.+..   +++....+.|..++..... ...+. ...    .....+++.+++.++++-..+++|+.+
T Consensus       185 ~gi~~d~~g~l---~vsd~~~~~i~~~~~~~~~-~~~~~~~~~----~~P~~i~~d~~g~l~vad~~~~rI~~i  250 (260)
T d1rwia_         185 WGIAVDEAGTV---YVTEHNTNQVVKLLAGSTT-STVLPFTGL----NTPLAVAVDSDRTVYVADRGNDRVVKL  250 (260)
T ss_dssp             EEEEECTTCCE---EEEETTTTEEEEECTTCSC-CEECCCCSC----CCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred             ccceeeeeeee---eeeecCCCEEEEEeCCCCe-EEEEccCCC----CCeEEEEEeCCCCEEEEECCCCEEEEE
Confidence            33555555543   5777777778777665432 22221 122    456889999999988887777777654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.015  Score=35.46  Aligned_cols=89  Identities=8%  Similarity=0.041  Sum_probs=53.2

Q ss_pred             CCCceEEEEeCccCceeeecccCCC-CCCCCeeEeeeCCCCceEEEe-------eCCCCcEEEeeCCCccchhe--eccc
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPEL-NSEPPACQTIPSSNISLFDSR-------PGHDCSIRLWNLDNKTCVQE--ITAH   73 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s-------~~~d~~v~iwd~~~~~~~~~--~~~~   73 (106)
                      ..+|.|.+||+.+++....+..... .-......++|++....+ .+       -+..+...++|+.++.....  ....
T Consensus        34 ~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~-~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~  112 (465)
T d1xfda1          34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALF-SYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS  112 (465)
T ss_dssp             CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEE-EESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred             eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEE-EEcccceeEeeccccEEEEEccCCceeeccCccCC
Confidence            4678899999998876333332221 123445667888776311 22       14456788899988763221  1222


Q ss_pred             cccCCCCeEEEEEcCCCCEEEEec
Q psy17135         74 RKKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        74 ~~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                      .    ..+....|||+|..+|-..
T Consensus       113 ~----~~l~~~~wSPDG~~iafv~  132 (465)
T d1xfda1         113 N----AKLQYAGWGPKGQQLIFIF  132 (465)
T ss_dssp             S----CCCSBCCBCSSTTCEEEEE
T ss_pred             c----cccceeeeccCCceEEEEe
Confidence            2    4555678999998876544

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.14  E-value=0.02  Score=35.98  Aligned_cols=80  Identities=4%  Similarity=-0.141  Sum_probs=52.0

Q ss_pred             CCCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          4 VPSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         4 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      .+.|.|.-+|+.+++.+-........   ..-.....+..   ++.|+.|+.++.+|.++|+.+-.+.....   ..-.-
T Consensus       463 ~~~G~l~AiD~~TG~i~W~~~~~~p~---~~g~lstaggl---VF~Gt~dg~l~A~Da~TGe~LW~~~~~~~---~~~~P  533 (582)
T d1flga_         463 DHVGSLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNL---VFTGTGDGYFKAFDAKSGKELWKFQTGSG---IVSPP  533 (582)
T ss_dssp             SCSEEEEEECTTTCCEEEEEEESSCC---CSCCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCC
T ss_pred             CCCCeEEEEcCCCCcEEeecCCCCCC---ccceeEEcCCe---EEEeCCCCeEEEEECCCCcEeEEEECCCC---ccccC
Confidence            34588999999999986665543221   11111222333   46799999999999999999877765442   22233


Q ss_pred             EEEcCCCCE
Q psy17135         84 VAFHPSKPF   92 (106)
Q Consensus        84 ~~~~~~~~~   92 (106)
                      +.|..+|+.
T Consensus       534 ~ty~~~G~q  542 (582)
T d1flga_         534 ITWEQDGEQ  542 (582)
T ss_dssp             EEEEETTEE
T ss_pred             EEEEECCEE
Confidence            566667764

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.035  Score=30.57  Aligned_cols=57  Identities=5%  Similarity=-0.053  Sum_probs=31.6

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEE
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIAS   95 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s   95 (106)
                      ....|+|.+...  +......+...+|...............    .......|+|||+.|+-
T Consensus       174 ~~~~~spdg~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~p~~SPDG~~i~f  230 (269)
T d2hqsa1         174 QDADVSSDGKFM--VMVSSNGGQQHIAKQDLATGGVQVLSST----FLDETPSLAPNGTMVIY  230 (269)
T ss_dssp             EEEEECTTSSEE--EEEEECSSCEEEEEEETTTCCEEECCCS----SSCEEEEECTTSSEEEE
T ss_pred             ccccccccccee--EEEeecCCceeeeEeecccccceEeecC----ccccceEECCCCCEEEE
Confidence            346678877774  2333444444555433322222333333    45567789999998653

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.01  E-value=0.026  Score=35.39  Aligned_cols=79  Identities=4%  Similarity=-0.178  Sum_probs=50.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      +.|.|.-+|+++++.+-+.......  .... ....+..   ++.++.|+.++.+|.++|+.+-++.-...   ....-+
T Consensus       442 ~~G~l~AiD~~TG~~~W~~~~~~~~--~~g~-l~Taggl---Vf~G~~dg~l~A~Da~tGe~lW~~~l~~~---~~a~P~  512 (571)
T d2ad6a1         442 EMGQIRAFDLTTGKAKWTKWEKFAA--WGGT-LYTKGGL---VWYATLDGYLKALDNKDGKELWNFKMPSG---GIGSPM  512 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCC--CSBC-EEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             CcccEEEeccCCCceeeEcCCCCCC--Ccce-eEecCCE---EEEECCCCeEEEEECCCCcEEEEEECCCC---ceecce
Confidence            4578999999999986665543211  1111 1122333   56799999999999999999877754432   223335


Q ss_pred             EEcCCCCE
Q psy17135         85 AFHPSKPF   92 (106)
Q Consensus        85 ~~~~~~~~   92 (106)
                      .|..+|+.
T Consensus       513 ty~~dGkq  520 (571)
T d2ad6a1         513 TYSFKGKQ  520 (571)
T ss_dssp             EEEETTEE
T ss_pred             EEEECCEE
Confidence            56557764

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.85  E-value=0.027  Score=35.55  Aligned_cols=79  Identities=4%  Similarity=-0.146  Sum_probs=49.9

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      +-|.|.-||+.+++..-........   ..-.....+..   ++.|+.|+.++.+|.++|+.+-.+.....   ....-+
T Consensus       451 ~~G~l~A~D~~TG~~~W~~~~~~~~---~gg~lsTaggl---VF~G~~Dg~l~A~Da~TGe~LW~~~~~~~---~~a~P~  521 (596)
T d1w6sa_         451 GLGQIKAYNAITGDYKWEKMERFAV---WGGTMATAGDL---VFYGTLDGYLKARDSDTGDLLWKFKIPSG---AIGYPM  521 (596)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCC---CSBCEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             CcceEEEEeCCCCceecccCCCCCC---ccceeEecCCE---EEEECCCCeEEEEECCCCcEeeEEECCCC---cccCCe
Confidence            3478999999999985554432211   11111222333   45799999999999999999887765442   222334


Q ss_pred             EEcCCCCE
Q psy17135         85 AFHPSKPF   92 (106)
Q Consensus        85 ~~~~~~~~   92 (106)
                      .|..+|+.
T Consensus       522 tY~~dGkQ  529 (596)
T d1w6sa_         522 TYTHKGTQ  529 (596)
T ss_dssp             EEEETTEE
T ss_pred             EEEECCEE
Confidence            55556764

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=95.66  E-value=0.043  Score=34.38  Aligned_cols=79  Identities=6%  Similarity=-0.010  Sum_probs=49.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      +-|.+.-||+.+++.+-+......... ..+  .-.+..   ++.++.|+.++.+|.++|+.+..+.....   ..-.-+
T Consensus       455 ~~G~l~AiD~~tGk~~W~~~~~~p~~g-g~l--staggl---VF~G~~dg~l~A~Da~TGe~LW~~~~~~~---~~~~P~  525 (573)
T d1kb0a2         455 PFGRLLAWDPVAQKAAWSVEHVSPWNG-GTL--TTAGNV---VFQGTADGRLVAYHAATGEKLWEAPTGTG---VVAAPS  525 (573)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSSCCC-CEE--EETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             CcccEEEeCCCCCceEeeecCCCCCCC-ceE--EEcCCE---EEEECCCCeEEEEECCCCcEeEEEECCCC---ccccCE
Confidence            347899999999998666554322111 111  122333   56789999999999999999877764432   111224


Q ss_pred             EEcCCCCE
Q psy17135         85 AFHPSKPF   92 (106)
Q Consensus        85 ~~~~~~~~   92 (106)
                      .|..+|+.
T Consensus       526 ty~~~GkQ  533 (573)
T d1kb0a2         526 TYMVDGRQ  533 (573)
T ss_dssp             EEEETTEE
T ss_pred             EEEECCEE
Confidence            45556663

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.63  E-value=0.066  Score=29.38  Aligned_cols=82  Identities=11%  Similarity=0.055  Sum_probs=48.1

Q ss_pred             eEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEc
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFH   87 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~   87 (106)
                      .|.|.|............   ......-.|+|++....|.........+.+.+...+. ...+..+.    .......|+
T Consensus        20 ~l~i~d~dG~~~~~l~~~---~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~s   91 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRS---PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFP----RHNGAPAFS   91 (269)
T ss_dssp             EEEEEETTSCSCEEEEEE---SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEEEECCS----SCEEEEEEC
T ss_pred             EEEEEcCCCCCcEEEecC---CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc-eeEEeeee----cccccceec
Confidence            578888765444222222   2234567899999996442222222334455555444 33444444    677888999


Q ss_pred             CCCCEEEEec
Q psy17135         88 PSKPFIASAG   97 (106)
Q Consensus        88 ~~~~~~~s~~   97 (106)
                      |++..++...
T Consensus        92 pdg~~i~~~~  101 (269)
T d2hqsa1          92 PDGSKLAFAL  101 (269)
T ss_dssp             TTSSEEEEEE
T ss_pred             CCCCeeeEee
Confidence            9999876544

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.51  E-value=0.044  Score=34.22  Aligned_cols=79  Identities=9%  Similarity=0.085  Sum_probs=50.6

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEE
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDV   84 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~   84 (106)
                      +.|.|.-+|+.+++.+-+.....+....   ...-.+..   ++.++.|+.++.+|.++|+.+-.+.....   ..-.-+
T Consensus       436 ~~G~l~A~D~~tGk~~W~~~~~~~~~gg---~l~Taggl---VF~G~~dg~l~A~Da~tGe~LW~~~l~~~---~~~~P~  506 (560)
T d1kv9a2         436 VSGALLAWDPVKQKAAWKVPYPTHWNGG---TLSTAGNL---VFQGTAAGQMHAYSADKGEALWQFEAQSG---IVAAPM  506 (560)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSSCCCC---EEEETTTE---EEEECTTSEEEEEETTTCCEEEEEECSSC---CCSCCE
T ss_pred             cccceEEEeCCCCeEeeeccCCCCCCCc---eeEECCCE---EEEECCCCcEEEEECCCCcEeEEEECCCC---ccccCE
Confidence            3578999999999987666554322111   11222333   46789999999999999999877765442   122234


Q ss_pred             EEcCCCCE
Q psy17135         85 AFHPSKPF   92 (106)
Q Consensus        85 ~~~~~~~~   92 (106)
                      .|..+|+.
T Consensus       507 ty~~dGkq  514 (560)
T d1kv9a2         507 TFELAGRQ  514 (560)
T ss_dssp             EEEETTEE
T ss_pred             EEEECCEE
Confidence            55556653

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.41  E-value=0.089  Score=29.48  Aligned_cols=57  Identities=7%  Similarity=0.170  Sum_probs=37.9

Q ss_pred             EEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecC-CCeEEEcC
Q psy17135         47 DSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGA-DGLAKVFV  106 (106)
Q Consensus        47 ~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~-d~~i~iwd  106 (106)
                      +++....+.|++|+.. ++.+.++-...  .......+++.++++++++-.. ++.|.+|+
T Consensus       171 ~v~d~~~~~V~~~d~~-G~~~~~~g~~g--~~~~P~giavD~~G~i~Vad~~~~~~v~~f~  228 (279)
T d1q7fa_         171 FISDNRAHCVKVFNYE-GQYLRQIGGEG--ITNYPIGVGINSNGEILIADNHNNFNLTIFT  228 (279)
T ss_dssp             EEEEGGGTEEEEEETT-CCEEEEESCTT--TSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred             EeeeccccceeeeecC-Cceeeeecccc--cccCCcccccccCCeEEEEECCCCcEEEEEC
Confidence            6777778889999874 55555553211  1146788899999998777543 45677764

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.38  E-value=0.088  Score=29.19  Aligned_cols=67  Identities=7%  Similarity=0.005  Sum_probs=43.0

Q ss_pred             CCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEEEc
Q psy17135         32 PPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAKVF  105 (106)
Q Consensus        32 ~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iw  105 (106)
                      ...+.+.+.+..   +++...++.+..++.+............    .....+++.+++.++++....+.+..+
T Consensus       142 p~~i~~~~~g~~---~v~~~~~~~i~~~d~~~~~~~~~~~~~~----~~p~gi~~d~~g~l~vsd~~~~~i~~~  208 (260)
T d1rwia_         142 PDGVAVDNSGNV---YVTDTDNNRVVKLEAESNNQVVLPFTDI----TAPWGIAVDEAGTVYVTEHNTNQVVKL  208 (260)
T ss_dssp             CCEEEECTTCCE---EEEEGGGTEEEEECTTTCCEEECCCSSC----CSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred             cceeeecCCCCE---eeeccccccccccccccceeeeeecccc----CCCccceeeeeeeeeeeecCCCEEEEE
Confidence            344555555443   5666667788888876543222112233    566888999999998888888877654

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=94.95  E-value=0.14  Score=29.95  Aligned_cols=90  Identities=13%  Similarity=0.047  Sum_probs=50.3

Q ss_pred             CceEEEEeCcc-Cceee--ecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchh--eecccc------
Q psy17135          6 SSVIYIWTLLE-LQTYA--RNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQ--EITAHR------   74 (106)
Q Consensus         6 d~~i~iwd~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~--~~~~~~------   74 (106)
                      ...|.+|+... +....  .............+.|+|.+...  .++...+++|.+|+...++...  ......      
T Consensus       166 ~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~--yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~  243 (365)
T d1jofa_         166 ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYL--YALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI  243 (365)
T ss_dssp             TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEE--EEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred             CCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceE--EEeccCCCEEEEEEecCCCceEEEEeeeeccccccc
Confidence            44677776543 22211  11111123345668889988764  4677778999999987654221  111000      


Q ss_pred             -------ccCCCCeEEEEEcCCCCEEEEec
Q psy17135         75 -------KKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        75 -------~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                             .........+.++|++++++++.
T Consensus       244 ~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         244 PDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             CCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             cccccccccccCCccceEECCCCCEEEEEc
Confidence                   00012355788999999987664

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=94.33  E-value=0.23  Score=28.97  Aligned_cols=72  Identities=15%  Similarity=0.022  Sum_probs=43.6

Q ss_pred             CCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCC-ccc--hheeccccccCCCCeEEEEEcCCCCEE-EEecCCCeEEEcC
Q psy17135         31 EPPACQTIPSSNISLFDSRPGHDCSIRLWNLDN-KTC--VQEITAHRKKFDESILDVAFHPSKPFI-ASAGADGLAKVFV  106 (106)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~-~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~-~s~~~d~~i~iwd  106 (106)
                      ....+.+.|.+...  +++......|.+|+... +..  ........  .......+.|+|+++++ ++.-.+++|.+|+
T Consensus       146 h~h~v~~sPdG~~l--~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~--~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~  221 (365)
T d1jofa_         146 GIHGMVFDPTETYL--YSADLTANKLWTHRKLASGEVELVGSVDAPD--PGDHPRWVAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             CEEEEEECTTSSEE--EEEETTTTEEEEEEECTTSCEEEEEEEECSS--TTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             cceEEEECCCCCEE--EEeeCCCCEEEEEEccCCCceeeccceeecC--CCCceEEEEECCCCceEEEeccCCCEEEEEE
Confidence            34578889988873  33434445677776553 322  11221111  01578899999999986 5555677777663

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.62  E-value=0.17  Score=27.64  Aligned_cols=51  Identities=16%  Similarity=0.119  Sum_probs=33.8

Q ss_pred             eeeC--CCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEe
Q psy17135         37 TIPS--SNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASA   96 (106)
Q Consensus        37 ~~~~--~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~   96 (106)
                      .+|.  +....  .+.  ++.|.+.|+.+++. +.+..+.    .......|||||+.|+-.
T Consensus         6 ~sPdi~G~~v~--f~~--~~dl~~~d~~~g~~-~~Lt~~~----~~~~~p~~SPDG~~iaf~   58 (281)
T d1k32a2           6 LNPDIHGDRII--FVC--CDDLWEHDLKSGST-RKIVSNL----GVINNARFFPDGRKIAIR   58 (281)
T ss_dssp             EEEEEETTEEE--EEE--TTEEEEEETTTCCE-EEEECSS----SEEEEEEECTTSSEEEEE
T ss_pred             cCCCCCCCEEE--EEe--CCcEEEEECCCCCE-EEEecCC----CcccCEEECCCCCEEEEE
Confidence            4566  66532  222  34577779987764 4565555    677888999999987643

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=93.59  E-value=0.32  Score=28.03  Aligned_cols=84  Identities=11%  Similarity=0.083  Sum_probs=45.8

Q ss_pred             eEEEEeCccCceeeecccCCCCCC-CCeeEeeeCCCCceEEEeeCCC-CcEEEeeCCCccchh--eeccccccCCCCeEE
Q psy17135          8 VIYIWTLLELQTYARNDCPELNSE-PPACQTIPSSNISLFDSRPGHD-CSIRLWNLDNKTCVQ--EITAHRKKFDESILD   83 (106)
Q Consensus         8 ~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~d-~~v~iwd~~~~~~~~--~~~~~~~~~~~~v~~   83 (106)
                      .+.+||..+++............. .....+.+.+..   ++.|+.+ ..+.+||..+..-..  .+...     ..-..
T Consensus        53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i---~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~-----r~~~~  124 (387)
T d1k3ia3          53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQI---VVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-----RGYQS  124 (387)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCE---EEECSSSTTCEEEEEGGGTEEEECCCCSSC-----CSSCE
T ss_pred             EEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcE---EEeecCCCcceeEecCccCccccccccccc-----ccccc
Confidence            466899888765332222111111 223445555544   5666544 578999988765322  22211     12345


Q ss_pred             EEEcCCCCEEEEecCC
Q psy17135         84 VAFHPSKPFIASAGAD   99 (106)
Q Consensus        84 ~~~~~~~~~~~s~~~d   99 (106)
                      .+..+++.+++.++.+
T Consensus       125 ~~~~~dG~v~v~GG~~  140 (387)
T d1k3ia3         125 SATMSDGRVFTIGGSW  140 (387)
T ss_dssp             EEECTTSCEEEECCCC
T ss_pred             eeeecCCceeeecccc
Confidence            5667788888887743

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=93.04  E-value=0.39  Score=27.43  Aligned_cols=57  Identities=9%  Similarity=0.004  Sum_probs=38.2

Q ss_pred             eeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEec
Q psy17135         34 ACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        34 ~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~   97 (106)
                      ...|.+.+..   .++-...+.|..|+..++.....+....    .....+++.+++.++++..
T Consensus        44 G~~~D~~G~L---y~~D~~~g~I~ri~p~g~~~~~~~~~~~----~~p~gla~~~dG~l~va~~  100 (319)
T d2dg1a1          44 GLNFDRQGQL---FLLDVFEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYL  100 (319)
T ss_dssp             EEEECTTSCE---EEEETTTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEEC
T ss_pred             eCEECCCCCE---EEEECCCCEEEEEECCCCeEEEEEeCCC----CCeeEEEECCCCCEEEEec
Confidence            3566665543   5666677888888887665444443333    5678899999998877654

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.86  E-value=0.35  Score=26.32  Aligned_cols=89  Identities=12%  Similarity=-0.005  Sum_probs=48.5

Q ss_pred             CCceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEe-eCCCC--cEEEeeCCCccchheecccc---ccCC
Q psy17135          5 PSSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSR-PGHDC--SIRLWNLDNKTCVQEITAHR---KKFD   78 (106)
Q Consensus         5 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~d~--~v~iwd~~~~~~~~~~~~~~---~~~~   78 (106)
                      .++.|.+.|+.+++.. ++..  .........|+|++....+... .+.+.  .+.+.+..+++..+ +....   ....
T Consensus        19 ~~~dl~~~d~~~g~~~-~Lt~--~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~-lt~~~~~~~~~~   94 (281)
T d1k32a2          19 CCDDLWEHDLKSGSTR-KIVS--NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR-ITYFSGKSTGRR   94 (281)
T ss_dssp             ETTEEEEEETTTCCEE-EEEC--SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE-CCCCCEEEETTE
T ss_pred             eCCcEEEEECCCCCEE-EEec--CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE-eeecCCCccCcc
Confidence            3456777799888762 2222  1233455789999988533111 12222  35666776665332 21111   0001


Q ss_pred             CCeEEEEEcCCCCEEEEec
Q psy17135         79 ESILDVAFHPSKPFIASAG   97 (106)
Q Consensus        79 ~~v~~~~~~~~~~~~~s~~   97 (106)
                      .......|+|+++.++...
T Consensus        95 ~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          95 MFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             ECSEEEEECTTCCEEEEEC
T ss_pred             ccccccccCCCCCEEEEEE
Confidence            3456778999999876543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=92.41  E-value=0.47  Score=26.70  Aligned_cols=56  Identities=14%  Similarity=-0.046  Sum_probs=34.5

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCcc-chheeccccccCCCCeEEEEE---cCCCCEEEE
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNKT-CVQEITAHRKKFDESILDVAF---HPSKPFIAS   95 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~s   95 (106)
                      -.+.+.+.+..   .++...++.|..++..... .+.......    ....+++|   ++|++.|..
T Consensus       211 dgia~d~dG~l---~va~~~~~~V~~i~p~G~~~~~~~~~~~~----~~pt~vafg~~~~D~~~Lyv  270 (302)
T d2p4oa1         211 DDFAFDVEGNL---YGATHIYNSVVRIAPDRSTTIIAQAEQGV----IGSTAVAFGQTEGDCTAIYV  270 (302)
T ss_dssp             SSEEEBTTCCE---EEECBTTCCEEEECTTCCEEEEECGGGTC----TTEEEEEECCSTTTTTEEEE
T ss_pred             cceEECCCCCE---EEEEcCCCcEEEECCCCCEEEEEecCCCC----CCceEEEEcCCCCCCCEEEE
Confidence            34666666654   5666677888888775432 223333333    56889999   667776543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=90.97  E-value=0.72  Score=26.26  Aligned_cols=88  Identities=13%  Similarity=-0.017  Sum_probs=44.9

Q ss_pred             CceEEEEeCccCceeeecccCC--CCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPE--LNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILD   83 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~   83 (106)
                      ++.|..||..++..........  .......+.+.+.+..   ++.+.....+..++.+.+.............-...+.
T Consensus        45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~---l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pnd  121 (314)
T d1pjxa_          45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ---LFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCND  121 (314)
T ss_dssp             CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE---EEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCE
T ss_pred             CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCE---EEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcE
Confidence            4667777777665422211110  0112334666676655   4455555567778876543211111111000023567


Q ss_pred             EEEcCCCCEEEEe
Q psy17135         84 VAFHPSKPFIASA   96 (106)
Q Consensus        84 ~~~~~~~~~~~s~   96 (106)
                      +++.++|.+.++-
T Consensus       122 l~~d~~G~lyvtd  134 (314)
T d1pjxa_         122 CAFDYEGNLWITA  134 (314)
T ss_dssp             EEECTTSCEEEEE
T ss_pred             EEECCCCCEEEec
Confidence            8889988887764

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.66  E-value=1.6  Score=25.40  Aligned_cols=52  Identities=21%  Similarity=0.195  Sum_probs=38.5

Q ss_pred             EeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEEEcCCCCEEEEecCCCeEE
Q psy17135         48 SRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVAFHPSKPFIASAGADGLAK  103 (106)
Q Consensus        48 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~  103 (106)
                      ..-..-|.+.++|+.++.++..-+-..    +.|+..+-..+..-++...++|.|.
T Consensus       271 yviTK~G~i~lyDleTgt~i~~nRIs~----~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         271 FLITKYGYIHLYDLETGTCIYMNRISG----ETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECCS----SCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             EEEecCcEEEEEEcccccEEEEeecCC----CceEEeccCCCCceEEEECCCCeEE
Confidence            445566899999999999987777666    6777666666656677777777764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=84.06  E-value=2.3  Score=24.02  Aligned_cols=72  Identities=10%  Similarity=0.007  Sum_probs=43.4

Q ss_pred             CeeEeeeCCCCceEEEeeCCCCcEEEeeCCCc-cchheecc---ccccCCCCeEEEEEcCCCCEEEEecCCCeEEEcC
Q psy17135         33 PACQTIPSSNISLFDSRPGHDCSIRLWNLDNK-TCVQEITA---HRKKFDESILDVAFHPSKPFIASAGADGLAKVFV  106 (106)
Q Consensus        33 ~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~-~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~s~~~d~~i~iwd  106 (106)
                      ..+.|.|.+...  .++-+..+.|..|++... ........   .........-.+++.++|++.++....+.|.++|
T Consensus       180 nGia~s~dg~~l--yvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         180 NGIALSTDEKVL--WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN  255 (319)
T ss_dssp             EEEEECTTSSEE--EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             eeeeeccccceE--EEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC
Confidence            447777877653  466677788988987642 22111110   0000002345688888999888888888888775

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.04  E-value=3.4  Score=23.11  Aligned_cols=82  Identities=13%  Similarity=0.034  Sum_probs=42.4

Q ss_pred             CceEEEEeCccCceeeecccCCCCCCCCeeEeeeCCCCceEEEeeCCCCcEEEeeCCCccchheeccccccCCCCeEEEE
Q psy17135          6 SSVIYIWTLLELQTYARNDCPELNSEPPACQTIPSSNISLFDSRPGHDCSIRLWNLDNKTCVQEITAHRKKFDESILDVA   85 (106)
Q Consensus         6 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~   85 (106)
                      .+.|.-||.++++. ..+..+   .....+.+.+.+..   ++ ++.+ .+..+|..+++...............+..+.
T Consensus        39 ~~~I~r~d~~~g~~-~~~~~~---~~~~~i~~~~dg~l---~v-a~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~  109 (295)
T d2ghsa1          39 ERELHELHLASGRK-TVHALP---FMGSALAKISDSKQ---LI-ASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGR  109 (295)
T ss_dssp             GTEEEEEETTTTEE-EEEECS---SCEEEEEEEETTEE---EE-EETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEE
T ss_pred             CCEEEEEECCCCeE-EEEECC---CCcEEEEEecCCCE---EE-EEeC-ccEEeecccceeeEEeeeecCCCcccceeeE
Confidence            35566666666554 122221   22334444444432   33 3444 4778999887643222111111113577888


Q ss_pred             EcCCCCEEEEe
Q psy17135         86 FHPSKPFIASA   96 (106)
Q Consensus        86 ~~~~~~~~~s~   96 (106)
                      +.|+|++.++.
T Consensus       110 vd~~G~iw~~~  120 (295)
T d2ghsa1         110 MHPSGALWIGT  120 (295)
T ss_dssp             ECTTSCEEEEE
T ss_pred             ECCCCCEEEEe
Confidence            88999876654