Psyllid ID: psy17371

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MLATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK
Secondary Structure (PSIPRED)
ccccccccccEEccHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccHHHHHHHHHHccccccEEEEEEEEEEEEcccccccccccccccEEccccccccccccccccccccHHHHHHHHHHHHHccHHHHccccccccccEEEEEEEEEEEEccccccEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccHcHHHHHHHHHHHHccEEEEEEEEEEEEEccEEEEccccccccccEEEEcccEEEEcccccEEcccHHHHHHHHHHHHHHHHHHHHHccccHHHcEEEEEEEEEEEEEEccccEEEEEEEEEEEccccccccccccccccccccHHHccHHHHHHHHHHHHHHccccccHHHcHHHHHHH
Coil and Loop (DISEMBL)
MLATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMmgdnldsslkettgiiprfchqlfdqipsnmVAQVKISYLEIYNEFVYDLLSSERKAlkvrespdtgifvsdlsvhgvSSFSEMQKWLSEGNKARAtastnmndkssrshsIFQIQLTltedtgssvtqkcsqinlvdlagservaQTKATEERFKEGRNINLSLMTLGQVItnlsdhsavppyrnstltyllk
Flexible Loop (DISEMBL)
MLATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAstnmndkssrsHSIFQIQLTLTEDTGSSVTQKCSQinlvdlagserVAQTKateerfkegrninLSLMTLGQVITnlsdhsavppyrnstltyllk
Low Complexity Region (SEG)
MLATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK
Disordered region (IsUnstruct)
***********IEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKV****DTGIFVSDLSVHGV*********************************IFQIQLTLT********QKCSQINLVDLA******************RNINLSLMTLGQVITNLSDH****************
Disordered Region (DISOPRED)
*******LQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLT**************QINLVDLAGSERVAQ***TEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK
Disordered Region (DISEMBL)
MLATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSE********************SIFQIQLTLTE********KCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK
Disordered Region (DISPRO)
**ATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAG*************FKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLATINPLQSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	237	2.2.26 [Sep-21-2011]
Q9EQW7	1749	Kinesin-like protein KIF1	no	N/A	0.924	0.125	0.441	3e-42
Q9H1H9	1805	Kinesin-like protein KIF1	yes	N/A	0.924	0.121	0.441	4e-42
Q9NGQ2	2205	Kinesin-related protein 1	yes	N/A	0.805	0.086	0.481	2e-41
Q15058	1648	Kinesin-like protein KIF1	no	N/A	0.793	0.114	0.444	2e-41
Q12756	1690	Kinesin-like protein KIF1	no	N/A	0.814	0.114	0.444	2e-39
B1AVY7	1312	Kinesin-like protein KIF1	no	N/A	0.805	0.145	0.460	3e-39
P33173	1695	Kinesin-like protein KIF1	no	N/A	0.814	0.113	0.439	5e-39
Q9NQT8	1826	Kinesin-like protein KIF1	no	N/A	0.886	0.115	0.427	8e-39
P23678	1584	Kinesin-like protein unc-	yes	N/A	0.940	0.140	0.416	1e-38
Q96L93	1317	Kinesin-like protein KIF1	no	N/A	0.805	0.145	0.447	3e-38

>sp|Q9EQW7|KI13A_MOUSE Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1

 Score =  171 bits (434), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/247 (44%), Positives = 150/247 (60%), Gaps = 28/247 (11%)

Query: 18  TLRYALQ-------ARNIFEKI--GTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQ 65
           T +YA Q          I EK   G N  +F +   G     S+    E  G+IPR C  
Sbjct: 69  TTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCA 128

Query: 66  LFDQIP----SNMVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVH 119
           LF +I      +   +V++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS  
Sbjct: 129 LFQRIALEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQL 188

Query: 120 GVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLT---EDTGSSVTQKCSQ 176
            V+SF +++  +SEGNK+R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+
Sbjct: 189 AVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSK 247

Query: 177 INLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP------PYRNS 230
           ++LVDLAGSERV++T A  ER KEG NIN SL TLG VI++L+D +A        PYR+S
Sbjct: 248 VSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDS 307

Query: 231 TLTYLLK 237
            LT+LLK
Sbjct: 308 VLTWLLK 314

Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis (By similarity). Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex.
Mus musculus (taxid: 10090)

>sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2

 Score =  171 bits (433), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/247 (44%), Positives = 150/247 (60%), Gaps = 28/247 (11%)

Query: 18  TLRYALQ-------ARNIFEKI--GTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQ 65
           T +YA Q          I EK   G N  +F +   G     S+    E  G+IPR C  
Sbjct: 69  TTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCA 128

Query: 66  LFDQIP----SNMVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVH 119
           LF +I      +   +V++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS  
Sbjct: 129 LFKRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQL 188

Query: 120 GVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLT---EDTGSSVTQKCSQ 176
            V+SF +++  +SEGNK+R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+
Sbjct: 189 AVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSK 247

Query: 177 INLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNS 230
           ++LVDLAGSERV++T A  ER KEG NIN SL TLG VI++L+D +A        PYR+S
Sbjct: 248 VSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKSKFVPYRDS 307

Query: 231 TLTYLLK 237
            LT+LLK
Sbjct: 308 VLTWLLK 314

Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis.

Homo sapiens (taxid: 9606)

>sp|Q9NGQ2|KIF1_DICDI Kinesin-related protein 1 OS=Dictyostelium discoideum GN=kif1 PE=1 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 132/214 (61%), Gaps = 23/214 (10%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSN----MVAQVKISYLEIYNEFVYDL 93
           +SMMG        E  GIIP  C +LF +I   PSN     + +  +SY+EIYNE V DL
Sbjct: 110 YSMMG------YGEEKGIIPLICEELFQRIQSTPSNSNEQTIYKTTVSYMEIYNEKVKDL 163

Query: 94  LS---SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS 150
           L+   ++   LKVR +P TG +V DLS   V SFSE+   + EG+KAR  ASTNMN  SS
Sbjct: 164 LNPNNNKTGGLKVRNNPSTGPYVEDLSKLAVKSFSEIDMLMDEGSKARTVASTNMNATSS 223

Query: 151 RSHSIFQIQLTLT--EDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSL 208
           RSH++F I  T +  + T  +   + S+I+LVDLAGSER   T AT  R KEG NIN SL
Sbjct: 224 RSHAVFTIVFTQSKIDKTRGTAIDRVSKISLVDLAGSERANSTGATGVRLKEGANINKSL 283

Query: 209 MTLGQVITNLSDHSAVP-----PYRNSTLTYLLK 237
            TLG+VI+ L+++S        PYR+S LTYLLK
Sbjct: 284 STLGKVISALAENSTSKKAVFVPYRDSVLTYLLK 317

Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end. Transports cytoplasmic vesicles and particularly phosphatidylinositol 4,5-bisphosphate-containing liposomes along microtubules.

Dictyostelium discoideum (taxid: 44689)

>sp|Q15058|KIF14_HUMAN Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 133/218 (61%), Gaps = 30/218 (13%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQV----KISYLEIYNEFVYDLL-- 94
           ++MMG        E  GIIPRFC  LF Q+      +V    ++S+ E+YNE ++DLL  
Sbjct: 455 YTMMG------FSEEPGIIPRFCEDLFSQVARKQTQEVSYHIEMSFFEVYNEKIHDLLVC 508

Query: 95  ----SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS 150
                  ++ L+VRE P  G +V  LS++ VSS++++Q WL  GNK RATA+T MNDKSS
Sbjct: 509 KDENGQRKQPLRVREHPVYGPYVEALSMNIVSSYADIQSWLELGNKQRATAATGMNDKSS 568

Query: 151 RSHSIFQIQLTLT-------EDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
           RSHS+F + +T T       E+    +T   S+INL+DLAGSER +      +R KEG +
Sbjct: 569 RSHSVFTLVMTQTKTEFVEGEEHDHRIT---SRINLIDLAGSERCSTAHTNGDRLKEGVS 625

Query: 204 INLSLMTLGQVITNLSDH----SAVPPYRNSTLTYLLK 237
           IN SL+TLG+VI+ LS+     S   PYR S LT+LLK
Sbjct: 626 INKSLLTLGKVISALSEQANQRSVFIPYRESVLTWLLK 663

Plays an essential role in cytokinesis.

Homo sapiens (taxid: 9606)

>sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=1 SV=2

 Score =  162 bits (410), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 130/216 (60%), Gaps = 23/216 (10%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEIYNEFVYDLLSS 96
           ++MMG       K+  GIIP+ C  LF +I      NM   V++SY+EIY E V DLL+ 
Sbjct: 105 YTMMG----KQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNP 160

Query: 97  ERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSI 155
           + K  L+VRE P  G +V DLS   V+S++++Q  +  GNKAR  A+TNMN+ SSRSH++
Sbjct: 161 KNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAV 220

Query: 156 FQIQLTLTEDTGSS--VTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           F I  T       +   T+K S+I+LVDLAGSER   T A   R KEG NIN SL TLG+
Sbjct: 221 FNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK 280

Query: 214 VITNLSDHSAVP------------PYRNSTLTYLLK 237
           VI+ L++  + P            PYR+S LT+LL+
Sbjct: 281 VISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR 316

Motor for anterograde axonal transport of synaptic vesicle precursors.

Homo sapiens (taxid: 9606)

>sp|B1AVY7|KI16B_MOUSE Kinesin-like protein KIF16B OS=Mus musculus GN=Kif16b PE=1 SV=1

 Score =  161 bits (408), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/217 (46%), Positives = 131/217 (60%), Gaps = 26/217 (11%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVA-----QVKISYLEIYNEFVYDLL- 94
           ++MMG++ DS      G+IPR C  LF +I           + ++SYLEIYNE V DLL 
Sbjct: 110 YTMMGNSGDS------GLIPRICEALFSRINETTRWDEASFRTEVSYLEIYNERVRDLLR 163

Query: 95  --SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRS 152
             SS+   L+VRE P  G +V DLS H V ++S++++ +  GN  R TA+T MND SSRS
Sbjct: 164 RKSSKTFNLRVREHPKEGPYVEDLSKHLVQNYSDVEELMDAGNINRTTAATGMNDVSSRS 223

Query: 153 HSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG 212
           H+IF I+ T  +       +  S+I+LVDLAGSER   T AT  R KEG NIN SL+TLG
Sbjct: 224 HAIFTIKFTQAKFDAEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLG 283

Query: 213 QVITNLSDHS---AVP---------PYRNSTLTYLLK 237
            VI+ L+D S   A P         PYR+S LT+LLK
Sbjct: 284 NVISALADLSQDAANPLVKKKQVFVPYRDSVLTWLLK 320

Plus end-directed microtubule-dependent motor protein involved in endosome transport and receptor recycling and degradation. Regulates the plus end motility of early endosomes and the balance between recycling and degradation of receptors such as EGF receptor (EGFR) and FGF receptor (FGFR). Regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development.

Mus musculus (taxid: 10090)

>sp|P33173|KIF1A_MOUSE Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2

 Score =  160 bits (406), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 129/216 (59%), Gaps = 23/216 (10%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEIYNEFVYDLLSS 96
           ++MMG       K+  GIIP+ C  LF +I      NM   V++SY+EIY E V DLL+ 
Sbjct: 105 YTMMG----KQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNP 160

Query: 97  ERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSI 155
           + K  L+VRE P  G +V DLS   V+S++++Q  +  GNK R  A+TNMN+ SSRSH++
Sbjct: 161 KNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAV 220

Query: 156 FQIQLTLTEDTGSS--VTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           F I  T       +   T+K S+I+LVDLAGSER   T A   R KEG NIN SL TLG+
Sbjct: 221 FNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK 280

Query: 214 VITNLSDHSAVP------------PYRNSTLTYLLK 237
           VI+ L++  + P            PYR+S LT+LL+
Sbjct: 281 VISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR 316

Motor for anterograde axonal transport of synaptic vesicle precursors.

Mus musculus (taxid: 10090)

>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1

 Score =  160 bits (405), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 137/229 (59%), Gaps = 19/229 (8%)

Query: 26  RNIFEKIGTNEFVFHFSMMGDNLDSSLKETT---GIIPRFCHQLFDQIPSN----MVAQV 78
           +N F+  G N  +F +   G     ++  T    G+IPR C  LF++           +V
Sbjct: 89  QNAFD--GYNACIFAYGQTGSGKSYTMMGTADQPGLIPRLCSGLFERTQKEENEEQSFKV 146

Query: 79  KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
           ++SY+EIYNE V DLL  +  R+ LKVRE    G +V  LS    +S+ +++  +SEGNK
Sbjct: 147 EVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAATSYKDIESLMSEGNK 206

Query: 137 ARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVT--QKCSQINLVDLAGSERVAQTKAT 194
           +R  A+TNMN++SSRSH++ +I LT T     S T  +K  +++LVDLAGSER  +T A 
Sbjct: 207 SRTVAATNMNEESSRSHAVLKITLTHTLYDAKSGTSGEKVGKLSLVDLAGSERATKTGAA 266

Query: 195 EERFKEGRNINLSLMTLGQVITNLSDHSAVP------PYRNSTLTYLLK 237
            +R KEG NIN SL TLG VI+ L+D SA        PYR+S LT+LLK
Sbjct: 267 GDRLKEGSNINESLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLK 315

Involved in reorganization of the cortical cytoskeleton. Regulates axon formation by promoting the formation of extra axons. May be functionally important for the intracellular trafficking of MAGUKs and associated protein complexes.

Homo sapiens (taxid: 9606)

>sp|P23678|UN104_CAEEL Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104 PE=2 SV=3

 Score =  160 bits (404), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/250 (41%), Positives = 143/250 (57%), Gaps = 27/250 (10%)

Query: 9   QSHIEESLAT--LRYALQARNI----FEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRF 62
           Q  + E L    L +A +  N+    + + G+ +    ++MMG   D    +  GIIPR 
Sbjct: 66  QKQVYEELGVEMLEHAFEGYNVCIFAYGQTGSGK---SYTMMGKANDP---DEMGIIPRL 119

Query: 63  CHQLFDQIPSN----MVAQVKISYLEIYNEFVYDLLSSERKA-LKVRESPDTGIFVSDLS 117
           C+ LF +I +N    +   V++SY+EIY E V DLL+      L+VRE P  G +V DL+
Sbjct: 120 CNDLFARIDNNNDKDVQYSVEVSYMEIYCERVKDLLNPNSGGNLRVREHPLLGPYVDDLT 179

Query: 118 VHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSS--VTQKCS 175
              V S+ ++   + EGNKAR  A+TNMN  SSRSH++F I LT       S   T+K S
Sbjct: 180 KMAVCSYHDICNLMDEGNKARTVAATNMNSTSSRSHAVFTIVLTQKRHCADSNLDTEKHS 239

Query: 176 QINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS--------AVPPY 227
           +I+LVDLAGSER   T A  +R KEG NIN SL TLG VI+ L++ S         V PY
Sbjct: 240 KISLVDLAGSERANSTGAEGQRLKEGANINKSLTTLGLVISKLAEESTKKKKSNKGVIPY 299

Query: 228 RNSTLTYLLK 237
           R+S LT+LL+
Sbjct: 300 RDSVLTWLLR 309

Involved in microtubule-associated transport.

Caenorhabditis elegans (taxid: 6239)

>sp|Q96L93|KI16B_HUMAN Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/217 (44%), Positives = 128/217 (58%), Gaps = 26/217 (11%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-----NMVAQVKISYLEIYNEFVYDLL- 94
           ++MMG++ DS      G+IPR C  LF +I           + ++SYLEIYNE V DLL 
Sbjct: 110 YTMMGNSGDS------GLIPRICEGLFSRINETTRWDEASFRTEVSYLEIYNERVRDLLR 163

Query: 95  --SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRS 152
             SS+   L+VRE P  G +V DLS H V ++ ++++ +  GN  R TA+T MND SSRS
Sbjct: 164 RKSSKTFNLRVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRS 223

Query: 153 HSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG 212
           H+IF I+ T  +       +  S+I+LVDLAGSER   T AT  R KEG NIN SL+TLG
Sbjct: 224 HAIFTIKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLG 283

Query: 213 QVITNLSDHS------------AVPPYRNSTLTYLLK 237
            VI+ L+D S               PYR+S LT+LLK
Sbjct: 284 NVISALADLSQDAANTLAKKKQVFVPYRDSVLTWLLK 320

Plus end-directed microtubule-dependent motor protein involved in endosome transport and receptor recycling and degradation. Regulates the plus end motility of early endosomes and the balance between recycling and degradation of receptors such as EGF receptor (EGFR) and FGF receptor (FGFR). Regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
158297149	972	AGAP008035-PA [Anopheles gambiae str. PE	0.831	0.202	0.495	6e-47
328782665	1209	PREDICTED: kinesin 3C [Apis mellifera]	0.831	0.162	0.5	7e-47
270008161	704	nebbish [Tribolium castaneum]	0.814	0.274	0.488	1e-46
189237405	619	PREDICTED: similar to kinesin-like prote	0.814	0.311	0.488	1e-46
170043367	533	kinesin-II 85 kDa subunit [Culex quinque	0.831	0.369	0.462	3e-45
195398423	762	GJ18342 [Drosophila virilis] gi|19414147	0.831	0.258	0.462	9e-45
312380726	527	hypothetical protein AND_07139 [Anophele	0.877	0.394	0.433	1e-44
340719558	1207	PREDICTED: kinesin-like protein KIF14-li	0.831	0.163	0.486	2e-44
157125836	1151	kinesin-like protein KIF1B [Aedes aegypt	0.831	0.171	0.488	8e-44
383862963	1199	PREDICTED: kinesin-like protein KIF14-li	0.831	0.164	0.481	1e-43

>gi|158297149|ref|XP_317425.4| AGAP008035-PA [Anopheles gambiae str. PEST] gi|157015055|gb|EAA12241.4| AGAP008035-PA [Anopheles gambiae str. PEST]

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/238 (49%), Positives = 151/238 (63%), Gaps = 41/238 (17%)

Query: 41  FSMMGDNLDSSLKET----TGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDL 93
           +SMMG +LD +  ET     GIIPRFCH+LF +I      + A+V++SY EIYNE ++DL
Sbjct: 229 YSMMGMDLDENYDETPNPDAGIIPRFCHELFARINALKGQVHAEVEVSYFEIYNEKIHDL 288

Query: 94  LS----------------SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKA 137
           LS                ++R ALKVRE P  G +V DLS H V S + ++ WL+ GN  
Sbjct: 289 LSVTPSDGVITVSTPGQGAKRAALKVREHPVWGPYVVDLSTHPVDSHTALRNWLAVGNSQ 348

Query: 138 RATASTNMNDKSSRSHSIFQIQLTLTE-------DTG------SSVTQ-KCSQINLVDLA 183
           RATA+T MNDKSSRSHSIF + L L E       D G      +SV Q K S+I+LVDLA
Sbjct: 349 RATAATGMNDKSSRSHSIFSVVLNLAEIVHSSDTDDGDHASSTASVKQTKRSKISLVDLA 408

Query: 184 GSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD--HSAVP--PYRNSTLTYLLK 237
           GSERV+QT A+  R KEG +IN SL+TLG+VI+ L+D   SA    PYR+S LT+LL+
Sbjct: 409 GSERVSQTCASGARLKEGVSINKSLLTLGKVISALADTKRSATTYIPYRDSVLTWLLR 466

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782665|ref|XP_396093.4| PREDICTED: kinesin 3C [Apis mellifera]

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 146/218 (66%), Gaps = 21/218 (9%)

Query: 41  FSMMGDNLD----SSLKETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLEIYNEFVYDLL 94
           +SMMG        SS  E  GIIPRFC ++F +I +NM  +  V+ISY EIYNE ++DLL
Sbjct: 304 YSMMGQESTQINASSFDEAIGIIPRFCQEIFARISNNMNIKTTVEISYFEIYNEKIHDLL 363

Query: 95  SS-----ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           ++     +R  LKVRE P  G ++ DLS H V ++ ++Q WL  GN  RATA+T MN+KS
Sbjct: 364 TNVNNGVKRAPLKVREHPVFGPYIVDLSQHCVQNYKDLQTWLKVGNSQRATAATGMNEKS 423

Query: 150 SRSHSIFQIQLTLTE-----DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNI 204
           SRSHSIF I LT T+     D GS    + S+INLVDLAGSER++QT A+ +R KEG +I
Sbjct: 424 SRSHSIFSIILTQTQINNQLDNGSIDASRRSKINLVDLAGSERLSQTCASGDRLKEGVSI 483

Query: 205 NLSLMTLGQVITNLSDHSA-----VPPYRNSTLTYLLK 237
           N SL+TLG+VI +L+++++       PYR S LT+LLK
Sbjct: 484 NKSLLTLGKVIASLAENTSNRKRGFVPYRESVLTWLLK 521

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008161|gb|EFA04609.1| nebbish [Tribolium castaneum]

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 149/213 (69%), Gaps = 20/213 (9%)

Query: 41  FSMMGD------NLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFV 90
           FSMMG       ++DS   E +GI PRFC +LF+++    P + V+ V++SY EIYNE +
Sbjct: 187 FSMMGPTTCDVVDIDS---EFSGITPRFCRELFERVSELSPQSSVS-VEVSYFEIYNEKI 242

Query: 91  YDLL----SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN 146
           +DLL    S+ +  LKVRE P+ G +V DLSVH V S+ E++ WL  GNK RATA+T MN
Sbjct: 243 HDLLAISNSASKTPLKVREHPEWGPYVVDLSVHNVKSYKELRNWLLLGNKNRATAATTMN 302

Query: 147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINL 206
           +KSSRSHSIF I+L LTE  G + + + S+++L+DLAGSER+  +  ++E+ ++G +IN 
Sbjct: 303 EKSSRSHSIFSIELCLTEGLGENDSSRRSKVSLIDLAGSERLVGSHNSDEKIRQGVSINK 362

Query: 207 SLMTLGQVITNLSDH--SAVPPYRNSTLTYLLK 237
           SL+TLG+VI+ L+D   +   PYR+S LT+LLK
Sbjct: 363 SLLTLGKVISALADQKKNQFVPYRDSVLTWLLK 395

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237405|ref|XP_973631.2| PREDICTED: similar to kinesin-like protein KIF1B [Tribolium castaneum]

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 149/213 (69%), Gaps = 20/213 (9%)

Query: 41  FSMMGD------NLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFV 90
           FSMMG       ++DS   E +GI PRFC +LF+++    P + V+ V++SY EIYNE +
Sbjct: 187 FSMMGPTTCDVVDIDS---EFSGITPRFCRELFERVSELSPQSSVS-VEVSYFEIYNEKI 242

Query: 91  YDLL----SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN 146
           +DLL    S+ +  LKVRE P+ G +V DLSVH V S+ E++ WL  GNK RATA+T MN
Sbjct: 243 HDLLAISNSASKTPLKVREHPEWGPYVVDLSVHNVKSYKELRNWLLLGNKNRATAATTMN 302

Query: 147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINL 206
           +KSSRSHSIF I+L LTE  G + + + S+++L+DLAGSER+  +  ++E+ ++G +IN 
Sbjct: 303 EKSSRSHSIFSIELCLTEGLGENDSSRRSKVSLIDLAGSERLVGSHNSDEKIRQGVSINK 362

Query: 207 SLMTLGQVITNLSDH--SAVPPYRNSTLTYLLK 237
           SL+TLG+VI+ L+D   +   PYR+S LT+LLK
Sbjct: 363 SLLTLGKVISALADQKKNQFVPYRDSVLTWLLK 395

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170043367|ref|XP_001849362.1| kinesin-II 85 kDa subunit [Culex quinquefasciatus] gi|167866727|gb|EDS30110.1| kinesin-II 85 kDa subunit [Culex quinquefasciatus]

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/227 (46%), Positives = 147/227 (64%), Gaps = 30/227 (13%)

Query: 41  FSMMG-DNLDSSLKETTGIIPRFCHQLF---DQIPSNMVAQVKISYLEIYNEFVYDLLS- 95
           +SMMG D+ D ++ +  GIIPRFC +LF   D I   + A+V++SY EIYNE ++DLL+ 
Sbjct: 269 YSMMGMDSDDLTINQEAGIIPRFCQELFHRIDSIKDKIQAEVEVSYFEIYNEKIHDLLAV 328

Query: 96  --------------SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATA 141
                          ++  LKVRE P  G +V DLS H V S S ++ WL+ GN  RATA
Sbjct: 329 SATDGVFAVTSANAGKKPPLKVREHPVWGPYVVDLSTHPVDSHSALRNWLAVGNSQRATA 388

Query: 142 STNMNDKSSRSHSIFQIQLTLTEDTGSSVTQ-------KCSQINLVDLAGSERVAQTKAT 194
           +T MNDKSSRSHSIF + L L+E   S  ++       K ++I+LVDLAGSER++ T A+
Sbjct: 389 ATGMNDKSSRSHSIFSVVLNLSEAVSSEDSEGKPIHQTKRAKISLVDLAGSERISHTCAS 448

Query: 195 EERFKEGRNINLSLMTLGQVITNLSDH----SAVPPYRNSTLTYLLK 237
            +R KEG +IN SL+TLG+VI++L++     +A  PYR+S LT+LL+
Sbjct: 449 GDRLKEGVSINKSLLTLGKVISSLAESKRNTAAYIPYRDSVLTWLLR 495

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195398423|ref|XP_002057821.1| GJ18342 [Drosophila virilis] gi|194141475|gb|EDW57894.1| GJ18342 [Drosophila virilis]

 Score =  186 bits (471), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/242 (46%), Positives = 148/242 (61%), Gaps = 45/242 (18%)

Query: 41  FSMMG-DNLDSSLKET------TGIIPRFCHQLF---DQIPSNMVAQVKISYLEIYNEFV 90
           +SMMG + LD +  +        GIIPRFCH+LF   D +   +  +V++SY EIYNE +
Sbjct: 244 YSMMGIEGLDDAALDGNAPHMEAGIIPRFCHELFRRIDAVKQQLQVEVEVSYFEIYNEKI 303

Query: 91  YDLLSSE------------RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKAR 138
           +DLLS +            R ALKVRE P  G +V DLS H V S+S ++ WL+ GN  R
Sbjct: 304 HDLLSVQQAIAATPDTPVQRHALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQR 363

Query: 139 ATASTNMNDKSSRSHSIFQIQLTLTE-----------DTGSSVT---QKCSQINLVDLAG 184
           ATAST MNDKSSRSHSIF I L LT+           D+G+ V+    + S+I+LVDLAG
Sbjct: 364 ATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGMSSDTDSGTVVSLRQTRRSKISLVDLAG 423

Query: 185 SERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDH-----SAVP----PYRNSTLTYL 235
           SER++ + +  ER +EG +IN SL+TLG+VI  L+D      SA P    PYR S LT+L
Sbjct: 424 SERISVSGSNGERIREGVSINKSLLTLGKVIAALADSRKLGGSATPSTFVPYRESVLTWL 483

Query: 236 LK 237
           L+
Sbjct: 484 LR 485

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312380726|gb|EFR26642.1| hypothetical protein AND_07139 [Anopheles darlingi]

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 146/265 (55%), Gaps = 57/265 (21%)

Query: 29  FEKIGTNEFVF-------HFSMMG----DNLDSSLKETTGIIPRFCHQLF---DQIPSNM 74
           FE   T  F +        +SMMG    DN D       GIIPRFC +LF   D +   +
Sbjct: 253 FEGYNTCLFAYGQTGSGKSYSMMGIDLDDNYDDGPNPEAGIIPRFCQELFARIDALKGRV 312

Query: 75  VAQVKISYLEIYNEFVYDLLSS-----------------ERKALKVRESPDTGIFVSDLS 117
            A+V++SY EIYNE +YDLLS                  ++  LK+RE P  G +V DLS
Sbjct: 313 HAEVEVSYFEIYNEKIYDLLSVTSSHGGVGLVGTPGNNVKKPTLKIREHPVLGPYVVDLS 372

Query: 118 VHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQ----- 172
            H V S + ++ WL+ GN  RATA+T MNDKSSRSHSIF + L L E   SS +      
Sbjct: 373 THPVDSHTALRNWLAVGNSQRATAATGMNDKSSRSHSIFSVMLNLAEVVSSSGSDTDTDG 432

Query: 173 ---------------KCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
                          K S+I+LVDLAGSERV  T A+  R +EG +IN SLMTLG+VIT 
Sbjct: 433 SGDGPSRKTTTVKQTKRSKISLVDLAGSERVHNTCASGARLREGVSINKSLMTLGKVITA 492

Query: 218 LSD-----HSAVPPYRNSTLTYLLK 237
           L+D     HS + PYR+S LT+LL+
Sbjct: 493 LADPKRNNHSYI-PYRDSALTWLLR 516

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719558|ref|XP_003398217.1| PREDICTED: kinesin-like protein KIF14-like [Bombus terrestris]

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 143/218 (65%), Gaps = 21/218 (9%)

Query: 41  FSMMGD----NLDSSLKETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLEIYNEFVYDLL 94
           +SMMG     N   S  E  GIIPRFC ++F  +  NM  +  V+ISY EIYNE ++DLL
Sbjct: 304 YSMMGQESAQNNTISHDEAIGIIPRFCQEIFTTVSVNMNTKTTVEISYFEIYNEKIHDLL 363

Query: 95  SS-----ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           ++     +R  LKVRE P  G ++ DLS H V ++ ++Q WL  GN  RATA+T MN+KS
Sbjct: 364 TNVNSGVKRAPLKVREHPVFGPYIVDLSQHCVQNYKDLQTWLKVGNSQRATAATGMNEKS 423

Query: 150 SRSHSIFQIQLTLTEDTG-----SSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNI 204
           SRSHSIF I LT T+        S+   + S+INLVDLAGSER++QT A+ +R KEG +I
Sbjct: 424 SRSHSIFSIILTQTQKNNQLSNESADASRRSKINLVDLAGSERLSQTCASGDRLKEGVSI 483

Query: 205 NLSLMTLGQVITNLSDHSA-----VPPYRNSTLTYLLK 237
           N SL+TLG+VI +L+++++       PYR S LT+LLK
Sbjct: 484 NKSLLTLGKVIASLAENTSNRKRGFVPYRESVLTWLLK 521

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157125836|ref|XP_001660806.1| kinesin-like protein KIF1B [Aedes aegypti] gi|108882659|gb|EAT46884.1| AAEL001986-PA [Aedes aegypti]

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/227 (48%), Positives = 146/227 (64%), Gaps = 30/227 (13%)

Query: 41  FSMMG-DNLDSSLKETTGIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSS 96
           +SMMG D+ D  +    GIIPRFC +LF +I +    M A+V++SY EIYNE ++DLL+ 
Sbjct: 272 YSMMGIDSDDMEISSEAGIIPRFCQELFCRIEALKGKMQAEVEVSYFEIYNEKIHDLLAV 331

Query: 97  --------------ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAS 142
                         ++  LKVRE P  G +V DLS H V S S ++ WL+ GN  RATA+
Sbjct: 332 SPTEGVFSVTTSNVKKPPLKVREHPFWGPYVVDLSTHPVDSHSALRNWLAVGNSQRATAA 391

Query: 143 TNMNDKSSRSHSIFQIQLTLTEDTGS------SVTQ-KCSQINLVDLAGSERVAQT-KAT 194
           T MNDKSSRSHSIF + L L+E   S      +V Q K S+I+LVDLAGSERV+QT  A+
Sbjct: 392 TGMNDKSSRSHSIFSVVLNLSEVISSEQRNLNAVHQTKRSKISLVDLAGSERVSQTCGAS 451

Query: 195 EERFKEGRNINLSLMTLGQVITNLSD----HSAVPPYRNSTLTYLLK 237
            ER KEG +IN SL+TLG+VI+ L++     S   PYR+S LT+LL+
Sbjct: 452 SERLKEGISINKSLLTLGKVISALAETKRSASTYIPYRDSVLTWLLR 498

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862963|ref|XP_003706952.1| PREDICTED: kinesin-like protein KIF14-like [Megachile rotundata]

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 147/218 (67%), Gaps = 21/218 (9%)

Query: 41  FSMMG-DNLDSS---LKETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLEIYNEFVYDLL 94
           +SMMG ++L  S   + +  GIIPRFC ++F +I +N+  +  V+ISY EIYNE ++DLL
Sbjct: 304 YSMMGQESLQISATPIDDEIGIIPRFCQEIFARISTNVNTKITVEISYFEIYNEKIHDLL 363

Query: 95  SS-----ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           ++     +R  LKVRE P  G ++ DLS H V ++ ++Q WL  GN  RATA+T MN+KS
Sbjct: 364 TNINNGVKRAPLKVREHPVFGPYIVDLSQHCVQNYKDLQTWLKVGNSQRATAATGMNEKS 423

Query: 150 SRSHSIFQIQLTLTE-----DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNI 204
           SRSHSIF I LT T+     +  S    + S+INLVDLAGSER++QT A+ +R KEG +I
Sbjct: 424 SRSHSIFSIILTQTQVNSQLNNESIDASRRSKINLVDLAGSERLSQTCASGDRLKEGVSI 483

Query: 205 NLSLMTLGQVITNLSDHS-----AVPPYRNSTLTYLLK 237
           N SL+TLG+VI +L++++        PYR S LT+LLK
Sbjct: 484 NKSLLTLGKVIASLAENTTNRKRGFVPYRESVLTWLLK 521

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
ASPGD|ASPL0000069504	1630	uncA [Emericella nidulans (tax	0.881	0.128	0.460	1.8e-39
ZFIN|ZDB-GENE-030131-5759	1506	kif14 "kinesin family member 1	0.924	0.145	0.432	2.7e-39
UNIPROTKB|I3L676	1432	KIF13A "Uncharacterized protei	0.881	0.145	0.456	4.6e-38
UNIPROTKB|G3MXV5	1700	KIF13A "Uncharacterized protei	0.881	0.122	0.456	4.8e-38
UNIPROTKB|F1MJK2	1760	KIF13A "Uncharacterized protei	0.881	0.118	0.456	5e-38
RGD|1307825	1699	Kif13a "kinesin family member	0.881	0.123	0.456	6.1e-38
UNIPROTKB|F1RUH8	1742	KIF13A "Uncharacterized protei	0.881	0.119	0.456	6.3e-38
MGI|MGI:1098264	1749	Kif13a "kinesin family member	0.881	0.119	0.456	6.4e-38
UNIPROTKB|J9P3Y4	1701	KIF13A "Uncharacterized protei	0.881	0.122	0.456	7.8e-38
UNIPROTKB|F1PBU4	1754	KIF13A "Uncharacterized protei	0.881	0.119	0.456	8.2e-38

ASPGD|ASPL0000069504 uncA [Emericella nidulans (taxid:162425)]

 Score = 435 (158.2 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 105/228 (46%), Positives = 139/228 (60%)

Query:    27 NIFEKIGTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQI-----PSNMVAQV 78
             N F+  G N  +F +   G     S+    +  G+IPR C  +F++I       N+   V
Sbjct:    98 NAFQ--GYNNCIFAYGQTGSGKSYSMMGYGKEYGVIPRICQDMFERIRKIQEDKNLTCTV 155

Query:    79 KISYLEIYNEFVYDLLSSERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKA 137
             ++SYLEIYNE V DLL+   K  LKVRE P TG +V DL+   V SF E++  + EGNKA
Sbjct:   156 EVSYLEIYNERVRDLLNPSNKGNLKVREHPSTGPYVEDLAKLAVRSFEEIENLMDEGNKA 215

Query:   138 RATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSV-TQKCSQINLVDLAGSERVAQTKATE 195
             R  A+TNMN+ SSRSH++F + LT    D  +S+ T+K S+I+LVDLAGSER   T AT 
Sbjct:   216 RTVAATNMNETSSRSHAVFTLMLTQKRHDAETSMDTEKVSRISLVDLAGSERANSTGATG 275

Query:   196 ERFKEGRNINLSLMTLGQVITNLSDHSAVP------PYRNSTLTYLLK 237
              R KEG  IN SL TLG+VI  L+D ++        PYR+S LT+LLK
Sbjct:   276 ARLKEGAEINRSLSTLGRVIAALADAASGKKKGKQVPYRDSVLTWLLK 323

GO:0005769 "early endosome" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=IDA

GO:0003777 "microtubule motor activity" evidence=ISM

GO:0007018 "microtubule-based movement" evidence=ISM

GO:0047496 "vesicle transport along microtubule" evidence=IMP

GO:0005881 "cytoplasmic microtubule" evidence=IDA

GO:0005876 "spindle microtubule" evidence=IDA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

ZFIN|ZDB-GENE-030131-5759 kif14 "kinesin family member 14" [Danio rerio (taxid:7955)]

 Score = 433 (157.5 bits), Expect = 2.7e-39, P = 2.7e-39
 Identities = 105/243 (43%), Positives = 149/243 (61%)

Query:    19 LRYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIPSN 73
             L Y   AR + E+   G N  +F +   G     ++    E TG+IPRFC +LF ++  +
Sbjct:   299 LIYEKLARPLLERAFEGFNTCLFAYGQTGSGKSYTMMGFGEETGVIPRFCEELFSRLARS 358

Query:    74 ----MVAQVKISYLEIYNEFVYDLL-----SSERKA-LKVRESPDTGIFVSDLSVHGVSS 123
                 M   +++SY E+YNE ++DLL      +++K  L+VRE P  G +V+DLS + VSS
Sbjct:   359 ETKEMSCHLEMSYFEVYNEKIHDLLVAKDEQNQKKMPLRVREHPVYGPYVADLSTNVVSS 418

Query:   124 FSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLT--EDTGSSVTQKC--SQINL 179
             +S+++ WL  GNK RATA+T MNDKSSRSHS+F + +T T  E         C  S+INL
Sbjct:   419 YSDIKTWLELGNKQRATAATGMNDKSSRSHSVFTLVMTQTKTEFVEEEEHDHCITSRINL 478

Query:   180 VDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-----AVPPYRNSTLTY 234
             VDLAGSER    + + +R +EG +IN SL+TLG+VI++LS+ S        PYR S LT+
Sbjct:   479 VDLAGSERCTSAQTSGDRLREGASINKSLLTLGKVISSLSEQSQSRKKVFTPYRESVLTW 538

Query:   235 LLK 237
             LLK
Sbjct:   539 LLK 541

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|I3L676 KIF13A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 421 (153.3 bits), Expect = 4.6e-38, P = 4.6e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    23 ILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKV 82

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    83 EVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 142

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   143 SRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 201

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   202 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 251

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|G3MXV5 KIF13A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 422 (153.6 bits), Expect = 4.8e-38, P = 4.8e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    34 ILEKAFQGYNACIFAYGQTGSGKSFSMMGNAEQRGLIPRLCCALFQRISLEQNESQTFKV 93

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    94 EVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 153

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   154 SRTVAATNMNEESSRSHAVFNIVITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 212

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   213 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 262

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1MJK2 KIF13A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 422 (153.6 bits), Expect = 5.0e-38, P = 5.0e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    34 ILEKAFQGYNACIFAYGQTGSGKSFSMMGNAEQRGLIPRLCCALFQRISLEQNESQTFKV 93

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    94 EVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 153

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   154 SRTVAATNMNEESSRSHAVFNIVITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 212

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   213 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 262

GO:0035459 "cargo loading into vesicle" evidence=IEA

GO:0032438 "melanosome organization" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0010008 "endosome membrane" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0000910 "cytokinesis" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

RGD|1307825 Kif13a "kinesin family member 13A" [Rattus norvegicus (taxid:10116)]

 Score = 421 (153.3 bits), Expect = 6.1e-38, P = 6.1e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    36 ILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCALFQRISLEQNESQTFKV 95

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    96 EVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 155

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   156 SRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 214

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   215 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 264

GO:0000910 "cytokinesis" evidence=ISO

GO:0003777 "microtubule motor activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0005874 "microtubule" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=ISO

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=ISO

GO:0010008 "endosome membrane" evidence=ISO

GO:0030496 "midbody" evidence=ISO

GO:0032438 "melanosome organization" evidence=ISO

GO:0032588 "trans-Golgi network membrane" evidence=ISO

GO:0035459 "cargo loading into vesicle" evidence=ISO

GO:0043001 "Golgi to plasma membrane protein transport" evidence=ISO

GO:0072383 "plus-end-directed vesicle transport along microtubule" evidence=ISO

UNIPROTKB|F1RUH8 KIF13A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 421 (153.3 bits), Expect = 6.3e-38, P = 6.3e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    23 ILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKV 82

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    83 EVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 142

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   143 SRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 201

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   202 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 251

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

MGI|MGI:1098264 Kif13a "kinesin family member 13A" [Mus musculus (taxid:10090)]

 Score = 421 (153.3 bits), Expect = 6.4e-38, P = 6.4e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    86 ILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCALFQRIALEQNESQTFKV 145

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:   146 EVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 205

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   206 SRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 264

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   265 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 314

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000910 "cytokinesis" evidence=ISO

GO:0003777 "microtubule motor activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=ISO

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0008333 "endosome to lysosome transport" evidence=ISO

GO:0010008 "endosome membrane" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030496 "midbody" evidence=ISO

GO:0032438 "melanosome organization" evidence=ISO

GO:0032588 "trans-Golgi network membrane" evidence=IDA

GO:0035459 "cargo loading into vesicle" evidence=ISO

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IDA

GO:0051301 "cell division" evidence=IEA

GO:0072383 "plus-end-directed vesicle transport along microtubule" evidence=IDA

UNIPROTKB|J9P3Y4 KIF13A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 420 (152.9 bits), Expect = 7.8e-38, P = 7.8e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    23 ILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQLGLIPRLCCALFKRISLEQNESQTFKV 82

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    83 EVSYMEIYNEKVRDLLDPKGNRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 142

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   143 SRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 201

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   202 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 251

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1PBU4 KIF13A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 420 (152.9 bits), Expect = 8.2e-38, P = 8.2e-38
 Identities = 105/230 (45%), Positives = 145/230 (63%)

Query:    28 IFEKI--GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIP----SNMVAQV 78
             I EK   G N  +F +   G     S+    E  G+IPR C  LF +I      +   +V
Sbjct:    38 ILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQLGLIPRLCCALFKRISLEQNESQTFKV 97

Query:    79 KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
             ++SY+EIYNE V DLL  +  R++LKVRE    G +V  LS   V+SF +++  +SEGNK
Sbjct:    98 EVSYMEIYNEKVRDLLDPKGNRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNK 157

Query:   137 ARATASTNMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKA 193
             +R  A+TNMN++SSRSH++F I +T T     +G+S  +K S+++LVDLAGSERV++T A
Sbjct:   158 SRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNS-GEKVSKVSLVDLAGSERVSKTGA 216

Query:   194 TEERFKEGRNINLSLMTLGQVITNLSDHSA------VPPYRNSTLTYLLK 237
               ER KEG NIN SL TLG VI++L+D +A        PYR+S LT+LLK
Sbjct:   217 AGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLK 266

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	237
cd01365	356	cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K	2e-81
smart00129	335	smart00129, KISc, Kinesin motor, catalytic domain	4e-79
pfam00225	326	pfam00225, Kinesin, Kinesin motor domain	3e-78
cd00106	328	cd00106, KISc, Kinesin motor domain	9e-69
cd01366	329	cd01366, KISc_C_terminal, Kinesin motor domain, KI	8e-62
cd01369	325	cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine	3e-60
cd01371	333	cd01371, KISc_KIF3, Kinesin motor domain, kinesins	2e-59
cd01374	321	cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E	4e-59
cd01372	341	cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik	6e-55
cd01364	352	cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC	1e-51
cd01370	338	cd01370, KISc_KIP3_like, Kinesin motor domain, KIP	2e-51
cd01373	337	cd01373, KISc_KLP2_like, Kinesin motor domain, KLP	3e-50
cd01368	345	cd01368, KISc_KIF23_like, Kinesin motor domain, KI	3e-44
cd01375	334	cd01375, KISc_KIF9_like, Kinesin motor domain, KIF	1e-43
COG5059	568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	5e-41
cd01367	322	cd01367, KISc_KIF2_like, Kinesin motor domain, KIF	2e-38
cd01376	319	cd01376, KISc_KID_like, Kinesin motor domain, KIF2	4e-36
PLN03188	1320	PLN03188, PLN03188, kinesin-12 family protein; Pro	3e-32
cd01363	186	cd01363, Motor_domain, Myosin and Kinesin motor do	5e-30
COG5059	568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	2e-05
cd01365	356	cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K	3e-05
pfam00225	326	pfam00225, Kinesin, Kinesin motor domain	5e-05
smart00129	335	smart00129, KISc, Kinesin motor, catalytic domain	2e-04
cd01372	341	cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik	6e-04
cd01364	352	cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC	0.004

>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins

 Score =  247 bits (632), Expect = 2e-81
 Identities = 107/214 (50%), Positives = 140/214 (65%), Gaps = 23/214 (10%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEIYNEFVYDLLSS 96
           ++MMG       KE  GIIPR C +LF +I S    N+  +V++SY+EIYNE V DLL+ 
Sbjct: 104 YTMMGY------KEEKGIIPRLCEELFQRIESKKEQNLSYEVEVSYMEIYNEKVRDLLNP 157

Query: 97  ERKA---LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSH 153
           ++K    LKVRE P  G +V DLS   V+S+ ++Q  L EGNK+R TASTNMND SSRSH
Sbjct: 158 KKKNKGNLKVREHPVLGPYVEDLSKVAVTSYEDIQNLLEEGNKSRTTASTNMNDTSSRSH 217

Query: 154 SIFQIQLTLT--EDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTL 211
           ++F I LT    +      T+K S+I+LVDLAGSER + T A  +R KEG NIN SL TL
Sbjct: 218 AVFTIVLTQKKLDKETDLTTEKVSKISLVDLAGSERASSTGAEGDRLKEGSNINKSLTTL 277

Query: 212 GQVITNLSDHSAVP--------PYRNSTLTYLLK 237
           G+VI+ L+D+S+          PYR+S LT+LLK
Sbjct: 278 GKVISALADNSSAKSKKKSSFIPYRDSVLTWLLK 311

KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively. Length = 356

>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain

 Score =  240 bits (615), Expect = 4e-79
 Identities = 90/202 (44%), Positives = 121/202 (59%), Gaps = 11/202 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++M+G        ++ GIIPR    LF++I          VK+SYLEIYNE + DLL+  
Sbjct: 95  YTMIGT------PDSPGIIPRALKDLFEKIDKREEGWQFSVKVSYLEIYNEKIRDLLNPS 148

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
            K L++RE    G++V  L+   VSSF E+   L +GNK R  A+T MN++SSRSH++F 
Sbjct: 149 SKKLEIREDEKGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFT 208

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           I +       SS + K S++NLVDLAGSER  +T A  +R KE  NIN SL  LG VI  
Sbjct: 209 ITVEQKIKNSSSGSGKASKLNLVDLAGSERAKKTGAEGDRLKEAGNINKSLSALGNVINA 268

Query: 218 LSDHSAVP--PYRNSTLTYLLK 237
           L+ HS     PYR+S LT LL+
Sbjct: 269 LAQHSKSRHIPYRDSKLTRLLQ 290

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division. Length = 335

>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain

 Score =  238 bits (609), Expect = 3e-78
 Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 13/205 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLS- 95
           ++M GD  +       GIIPR    LF++I           V++SYLEIYNE +YDLLS 
Sbjct: 89  YTMEGDPPEEE----PGIIPRALEDLFERIEERKERKWSFSVRVSYLEIYNEKIYDLLSP 144

Query: 96  -SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
            S++K L++RE P  G++V  L+   V+S  E+ + L  GNK R  ASTNMN++SSRSH+
Sbjct: 145 SSKKKKLRIREDPKKGVYVKGLTEVEVTSAEEVLELLELGNKNRTVASTNMNEESSRSHA 204

Query: 155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATE-ERFKEGRNINLSLMTLGQ 213
           IF I +    +  +  + K  ++NLVDLAGSER ++T A    R KE  NIN SL  LG 
Sbjct: 205 IFTITVE-QRNRDTDGSVKTGKLNLVDLAGSERASKTGAAGGRRLKEAANINKSLSALGN 263

Query: 214 VITNLSD-HSAVPPYRNSTLTYLLK 237
           VI  L++  S+  PYR+S LT LL+
Sbjct: 264 VINALAENQSSHIPYRDSKLTRLLQ 288

Length = 326

>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain

 Score =  214 bits (546), Expect = 9e-69
 Identities = 92/205 (44%), Positives = 116/205 (56%), Gaps = 14/205 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           ++M G        +  GIIPR    LF+ I      N    V +SYLEIYNE VYDLLS 
Sbjct: 94  YTMFGSP------KDPGIIPRALEDLFNLIDERKEKNKSFSVSVSYLEIYNEKVYDLLSP 147

Query: 97  E--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
           E   K L +RE P  G++V  L+   V S  +    L +G K R TAST MN++SSRSH+
Sbjct: 148 EPPSKPLSLREDPKGGVYVKGLTEVEVGSAEDALSLLQKGLKNRTTASTAMNERSSRSHA 207

Query: 155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQV 214
           IF I +     T    + K S++NLVDLAGSER  +T A  +R KE +NIN SL  LG V
Sbjct: 208 IFTIHVEQRNTTNDGRSIKSSKLNLVDLAGSERAKKTGAEGDRLKEAKNINKSLSALGNV 267

Query: 215 ITNLSDHSAVP--PYRNSTLTYLLK 237
           I+ LS        PYR+S LT LL+
Sbjct: 268 ISALSSGQKKKHIPYRDSKLTRLLQ 292

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 328

>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

 Score =  196 bits (500), Expect = 8e-62
 Identities = 85/205 (41%), Positives = 122/205 (59%), Gaps = 17/205 (8%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVA----QVKISYLEIYNEFVYDLLSS 96
           ++M G        E  GIIPR   QLF+             +  S LEIYNE + DLL++
Sbjct: 93  YTMEGP------PENPGIIPRALEQLFNTAEELKEKGWSYTITASMLEIYNETIRDLLAT 146

Query: 97  E---RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSH 153
           +   +K L+++       +V++L+   VSS  E+ + L+ G+K R+ ASTNMN+ SSRSH
Sbjct: 147 KPAPKKKLEIKHDSKGETYVTNLTEVPVSSPEEVTRLLNLGSKNRSVASTNMNEHSSRSH 206

Query: 154 SIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           ++FQ+++  T       T+   ++NLVDLAGSER+ ++ AT +R KE + IN SL  LG 
Sbjct: 207 AVFQLKIRGTNLQTGEQTR--GKLNLVDLAGSERLKKSGATGDRLKEAQAINKSLSALGD 264

Query: 214 VITNL-SDHSAVPPYRNSTLTYLLK 237
           VI+ L S  S V PYRNS LTYLL+
Sbjct: 265 VISALRSKDSHV-PYRNSKLTYLLQ 288

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329

>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup

 Score =  192 bits (489), Expect = 3e-60
 Identities = 87/201 (43%), Positives = 122/201 (60%), Gaps = 9/201 (4%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++M G   D  LK   GIIPR  H +F+ I     N+   VK+SYLEIY E + DLL   
Sbjct: 92  YTMEGPPGDPELK---GIIPRIVHDIFEHISSMDENLEFHVKVSYLEIYMEKIRDLLDVS 148

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
           +  L+V E  + G++V  L+   VSS  E+ + ++EG   RA ASTNMN++SSRSHSIF 
Sbjct: 149 KDNLQVHEDKNRGVYVKGLTERFVSSPEEVLEVINEGKSNRAVASTNMNEESSRSHSIFL 208

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           I L   E+  +   ++  ++ LVDLAGSE+V++T A  +  +E + IN SL  LG VI  
Sbjct: 209 ITLK-QENVETGSKKR-GKLFLVDLAGSEKVSKTGAEGQTLEEAKKINKSLSALGNVINA 266

Query: 218 LSD-HSAVPPYRNSTLTYLLK 237
           L+D  S   PYR+S LT +L+
Sbjct: 267 LTDGKSTHIPYRDSKLTRILQ 287

Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 325

>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins

 Score =  189 bits (483), Expect = 2e-59
 Identities = 92/204 (45%), Positives = 123/204 (60%), Gaps = 12/204 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLEIYNEFVYDLLSSE- 97
           F+M G        E  GIIP     +F  I      Q  V++SYLEIYNE V DLL  + 
Sbjct: 97  FTMEGVR---EPPELRGIIPNSFAHIFGHIAKAENVQFLVRVSYLEIYNEEVRDLLGKDQ 153

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
           +K L+++E PD G++V DLS+  V +  EM K ++ GNK R+  +TNMN+ SSRSHSIF 
Sbjct: 154 KKKLELKERPDRGVYVKDLSMFVVKNAEEMDKLMTLGNKNRSVGATNMNEDSSRSHSIFT 213

Query: 158 IQL---TLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQV 214
           I +      ED  + +  +  ++NLVDLAGSER ++T AT +R KE   INLSL  LG V
Sbjct: 214 ITIECSEKGEDGENHI--RVGKLNLVDLAGSERQSKTGATGDRLKEATKINLSLSALGNV 271

Query: 215 ITNLSDHSAVP-PYRNSTLTYLLK 237
           I+ L D  +   PYR+S LT LL+
Sbjct: 272 ISALVDGKSTHIPYRDSKLTRLLQ 295

Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 333

>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis

 Score =  189 bits (481), Expect = 4e-59
 Identities = 84/201 (41%), Positives = 122/201 (60%), Gaps = 12/201 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIP--SNMVAQVKISYLEIYNEFVYDLLSSER 98
           F+M GD      ++  GIIP     +F +I    +    +++SYLEIYNE + DLLS   
Sbjct: 89  FTMSGD------EQEPGIIPLAVRDIFQRIQDTPDREFLLRVSYLEIYNEKIKDLLSPSP 142

Query: 99  KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQI 158
           + L++RE P+ G+ V+ L+   V+S   + + ++ G K R    T+ N++SSRSH+IFQ+
Sbjct: 143 QELRIREDPNKGVVVAGLTEEIVTSPEHLLQLIARGEKNRHVGETDFNERSSRSHTIFQL 202

Query: 159 QLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
            +   E     S T + S +NL+DLAGSER +QT A  ER KEG  IN SL+TLG VI+ 
Sbjct: 203 TIESRERGDSESGTVRVSTLNLIDLAGSERASQTGAG-ERRKEGSFINKSLLTLGTVISK 261

Query: 218 LSD--HSAVPPYRNSTLTYLL 236
           LS+  +S   PYR+S LT +L
Sbjct: 262 LSEGKNSGHIPYRDSKLTRIL 282

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 321

>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily

 Score =  179 bits (455), Expect = 6e-55
 Identities = 84/214 (39%), Positives = 115/214 (53%), Gaps = 17/214 (7%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLF---DQIPSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++M      S  +E  GIIPR    +F   D+       Q+K+S+LE+YNE V DLLS  
Sbjct: 89  YTMGTAFTASEDEEEVGIIPRAIQHIFKKIDEKKDEPDFQLKVSFLELYNEEVRDLLSPS 148

Query: 98  RKA---LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
                 +++RE     I +  L+   V+S  E+   L +G+ +R TAST MN +SSRSH+
Sbjct: 149 TSEKSPIQIREDSKGNIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHA 208

Query: 155 IFQIQLTLTEDTGSSVTQK--------CSQINLVDLAGSERVAQTKATEERFKEGRNINL 206
           IF I L  T   G               S+ + VDLAGSER+ +T AT +R KEG +IN 
Sbjct: 209 IFTITLEQTRKNGPIAPMSGDDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINS 268

Query: 207 SLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
            L+ LG VI+ L D S      PYR+S LT LL+
Sbjct: 269 GLLALGNVISALGDESKKGSHVPYRDSKLTRLLQ 302

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341

>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division

 Score =  170 bits (433), Expect = 1e-51
 Identities = 89/208 (42%), Positives = 124/208 (59%), Gaps = 12/208 (5%)

Query: 41  FSMMGD-----NLDSSLKETTGIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLL 94
           ++M GD          L    GIIPR  +QLF+++ S      VK+SYLE+YNE ++DLL
Sbjct: 97  YTMEGDRTDNKGSTWELSPHAGIIPRALYQLFEKLESQNTEYSVKVSYLELYNEELFDLL 156

Query: 95  SSE---RKALKVRESPDT--GIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           SSE    K L++ +  +   G+ +  L    V++ +E  K L +G+  R TA+T MND+S
Sbjct: 157 SSESDLNKPLRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRKTAATLMNDQS 216

Query: 150 SRSHSIFQIQLTLTEDTGSSVTQ-KCSQINLVDLAGSERVAQTKATEERFKEGRNINLSL 208
           SRSHSIF I + + E T S     K  ++NLVDLAGSE + ++ A  +R +E  NIN SL
Sbjct: 217 SRSHSIFSITIHIKETTISGEELVKIGKLNLVDLAGSENIGRSGAENKRAREAGNINQSL 276

Query: 209 MTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           +TLG+VI  L + S   PYR S LT LL
Sbjct: 277 LTLGRVINALVEKSPHIPYRESKLTRLL 304

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 352

>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup

 Score =  169 bits (431), Expect = 2e-51
 Identities = 77/190 (40%), Positives = 103/190 (54%), Gaps = 11/190 (5%)

Query: 57  GIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFV 113
           G++      LFD+I     +   +V +SYLEIYNE + DLLS     L++RE P+ GI V
Sbjct: 113 GLMVLTMKDLFDKIEERKDDKEFEVSLSYLEIYNETIRDLLSPSSGPLELREDPNQGIVV 172

Query: 114 SDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQI---QLTLTEDTGSSV 170
           + L+ H   S  E+ + L +GN+ R    T  N  SSRSH++ QI   Q   T      V
Sbjct: 173 AGLTEHQPKSAEEILELLMKGNRNRTQEPTEANATSSRSHAVLQITVRQKDRTASINQQV 232

Query: 171 TQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PY 227
                +++L+DLAGSER + T    +R KEG NIN SL+ LG  I  L D        PY
Sbjct: 233 RI--GKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALVDGKKKNKHIPY 290

Query: 228 RNSTLTYLLK 237
           R+S LT LLK
Sbjct: 291 RDSKLTRLLK 300

The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 338

>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup

 Score =  166 bits (422), Expect = 3e-50
 Identities = 85/213 (39%), Positives = 116/213 (54%), Gaps = 19/213 (8%)

Query: 41  FSMMG--DNLDSSLKETTGIIPRFCHQLFDQI-------PSNMVAQVKISYLEIYNEFVY 91
           ++MMG   + D S     G+IPR    LF  I          +    K S+LEIYNE + 
Sbjct: 90  YTMMGPSSSDDESPHGLQGVIPRIFEYLFSLIQREEEKRGDGLKFLCKCSFLEIYNEQIT 149

Query: 92  DLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSR 151
           DLL    + LK+RE    G++V +L+   VSS+ ++ + L +G   R  A+T+MN +SSR
Sbjct: 150 DLLDPTSRNLKIREDIKKGVYVENLTEEYVSSYEDVYQVLLKGLSNRKVAATSMNSESSR 209

Query: 152 SHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTL 211
           SH++F   +   E   SS   + S++NLVDLAGSER     A   R KE +NIN SL TL
Sbjct: 210 SHAVFTCTIESWEKKASSTNIRTSRLNLVDLAGSERQKDDGAEGVRLKEAKNINKSLSTL 269

Query: 212 GQVITNLSD-------HSAVPPYRNSTLTYLLK 237
           G VI  L D       H    PYR+S LT+LL+
Sbjct: 270 GHVIMALVDVAHGKQRHV---PYRDSKLTFLLR 299

Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 337

>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup

 Score =  151 bits (383), Expect = 3e-44
 Identities = 77/203 (37%), Positives = 114/203 (56%), Gaps = 21/203 (10%)

Query: 53  KETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNEFVYDLL------SSERKALKVRES 106
               GI+PR    +F+ I       V +SY+EIYN ++YDLL      + +R++L++RE 
Sbjct: 110 PGDGGILPRSLDVIFNSIGG---YSVFVSYVEIYNNYIYDLLEDSPSSTKKRQSLRLRED 166

Query: 107 PDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQL------ 160
            +  ++V+ L+   VSS  E ++    G K R  A T +N +SSRSHS+F I+L      
Sbjct: 167 HNGNMYVAGLTEVEVSSTEEAREVFKRGQKNRRVAGTKLNRESSRSHSVFTIKLVQAPGD 226

Query: 161 TLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNL-- 218
           +  +          SQ++LVDLAGSER ++T+ T ER KE  NIN SLMTLG+ I  L  
Sbjct: 227 SDGDVDQDKDQITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGKCIEVLRE 286

Query: 219 ----SDHSAVPPYRNSTLTYLLK 237
                  + + PYR+S LT+L +
Sbjct: 287 NQLSGSTNKMVPYRDSKLTHLFQ 309

Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 345

>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling

 Score =  149 bits (378), Expect = 1e-43
 Identities = 80/206 (38%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIP--SNMVAQVKISYLEIYNEFVYDLLSSER 98
           F+M G    +   +  G+IPR   Q+F ++   +     V +SYLEIYNE +YDLL    
Sbjct: 96  FTMTGG---TESYKDRGLIPRALEQVFREVAMRATKTYTVHVSYLEIYNEQLYDLLGDTP 152

Query: 99  ------KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRS 152
                  A+ + E  +  I V  LS+H  ++  E    L  G   R  A T+MN  SSRS
Sbjct: 153 EALESLPAVTILEDSEQNIHVKGLSLHSATTEEEALNLLFLGETNRTIAETSMNQASSRS 212

Query: 153 HSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG 212
           H IF I L        S   + S++NLVDLAGSERV++T  + +  KE + IN SL  L 
Sbjct: 213 HCIFTIHLESRSREAGSEVVRLSKLNLVDLAGSERVSKTGVSGQVLKEAKYINKSLSFLE 272

Query: 213 QVITNLSD-HSAVPPYRNSTLTYLLK 237
           QVI  LS+      PYRNS LT++L+
Sbjct: 273 QVINALSEKARTHVPYRNSKLTHVLR 298

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 334

>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]

 Score =  146 bits (371), Expect = 5e-41
 Identities = 93/202 (46%), Positives = 120/202 (59%), Gaps = 13/202 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQ---VKISYLEIYNEFVYDLLSSE 97
           ++M G       +E  GIIP    +LF ++    + +   V ISYLEIYNE +YDLLS  
Sbjct: 105 YTMSGT------EEEPGIIPLSLKELFSKLEDLSMTKDFAVSISYLEIYNEKIYDLLSPN 158

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
            ++L +RE    G+ V+ L+   VSS  E+   L +G K R TAST +ND+SSRSHSIFQ
Sbjct: 159 EESLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTASTEINDESSRSHSIFQ 218

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           I   L      S T + S+++LVDLAGSER A+T     R KEG +IN SL+TLG VI  
Sbjct: 219 I--ELASKNKVSGTSETSKLSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINA 276

Query: 218 LSD--HSAVPPYRNSTLTYLLK 237
           L D   S   PYR S LT LL+
Sbjct: 277 LGDKKKSGHIPYRESKLTRLLQ 298

Length = 568

>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group

 Score =  135 bits (342), Expect = 2e-38
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 14/199 (7%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI-PSNMVAQVKISYLEIYNEFVYDLLSSERK 99
           ++M+GD          G+       +F  +   N    V +S+ EIY   ++DLL+ +RK
Sbjct: 100 YTMLGDE------NQEGLYALAARDIFRLLAQPNDDLGVTVSFFEIYGGKLFDLLN-DRK 152

Query: 100 ALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQ 159
            L V E     + +  L+   V+S  E+ + +  GN  R T ST  ND+SSRSH+I QI 
Sbjct: 153 RLSVLEDGKGNVQIVGLTEKPVTSVDELLELIESGNSLRTTGSTGANDQSSRSHAILQII 212

Query: 160 LTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKA-TEERFKEGRNINLSLMTLGQVITNL 218
           L   +     +     +++ +DLAGSER A T     +  KEG  IN SL+ L + I  L
Sbjct: 213 L-KNKKLNKLL----GKLSFIDLAGSERGADTSEHDRQTRKEGAEINKSLLALKECIRAL 267

Query: 219 SDHSAVPPYRNSTLTYLLK 237
           + + A  P+R S LT +L+
Sbjct: 268 ASNKAHVPFRGSKLTQVLR 286

KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 322

>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup

 Score =  129 bits (326), Expect = 4e-36
 Identities = 71/198 (35%), Positives = 99/198 (50%), Gaps = 11/198 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLSSERK 99
            +M+GD          G+IPR    L              +SY EIYNE VYDLL   +K
Sbjct: 96  HTMLGD------PNEPGLIPRTLSDLLRMGRKQAWTGAFSMSYYEIYNEKVYDLLEPAKK 149

Query: 100 ALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQ 159
            L +RE  D  I +  L+   + S +E ++     +K R  A+T +ND SSRSH++ +I+
Sbjct: 150 ELPIREDKDGNILIVGLTSKPIKSMAEFEEAYIPASKNRTVAATKLNDNSSRSHAVLRIK 209

Query: 160 LTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLS 219
           +T       S  Q   ++NL+DLAGSE   +T     R KE   IN SL  L +V+  L+
Sbjct: 210 VTQPA----SNIQLEGKLNLIDLAGSEDNRRTGNEGIRLKESAAINSSLFVLSKVVDALN 265

Query: 220 DHSAVPPYRNSTLTYLLK 237
                 PYR S LT LL+
Sbjct: 266 KGLPRIPYRESKLTRLLQ 283

Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 319

>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional

 Score =  123 bits (310), Expect = 3e-32
 Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 19/198 (9%)

Query: 57  GIIPRFCHQLFDQIPSNMVA--------QVKISYLEIYNEFVYDLLSSERKALKVRESPD 108
           G+ PR   +LF +I    +         Q + S+LEIYNE + DLL   +K L++RE   
Sbjct: 201 GLTPRVFERLFARINEEQIKHADRQLKYQCRCSFLEIYNEQITDLLDPSQKNLQIREDVK 260

Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIF----QIQLTLTE 164
           +G++V +L+   V +  ++ + L +G   R T +T++N +SSRSHS+F    + +     
Sbjct: 261 SGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSVA 320

Query: 165 DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAV 224
           D  SS   K S+INLVDLAGSER   T A  +R KE  NIN SL  LG +I  L++ S  
Sbjct: 321 DGLSSF--KTSRINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEISQT 378

Query: 225 P-----PYRNSTLTYLLK 237
                 PYR+S LT+LL+
Sbjct: 379 GKQRHIPYRDSRLTFLLQ 396

Length = 1320

>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain

 Score =  109 bits (275), Expect = 5e-30
 Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 1/108 (0%)

Query: 131 LSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQ-KCSQINLVDLAGSERVA 189
           + +GN  R TA+T MN+ SSRSHS+F+I         S+  Q K  +INLVDLAGSER+ 
Sbjct: 62  MDKGNANRTTAATAMNEHSSRSHSVFRIHFGGKNALASATEQPKVGKINLVDLAGSERID 121

Query: 190 QTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
            + A   R  E  NIN SL TLG VI+ L++  +  PYR S LT LL+
Sbjct: 122 FSGAEGSRLTETANINKSLSTLGNVISALAERDSHVPYRESKLTRLLQ 169

These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes. Length = 186

>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 55/267 (20%), Positives = 93/267 (34%), Gaps = 55/267 (20%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI------------------------FEKIGTNE 36
           ++ TI+P  +  EE++ TL++A +A++I                         ++     
Sbjct: 309 VICTISPSSNSFEETINTLKFASRAKSIKNKIQVNSSSDSSREIEEIKFDLSEDRSEIEI 368

Query: 37  FVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQV-----------------K 79
            VF          SSL      +     +         +                     
Sbjct: 369 LVFREQSQ--LSQSSLSGIFAYMQSLKKETETLKSRIDLIMKSIISGTFERKKLLKEEGW 426

Query: 80  ISYLEIYNEFVY-----DLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEG 134
                +    +       L   E    K +      +     S+          +  SE 
Sbjct: 427 KYKSTLQFLRIEIDRLLLLREEELSKKKTKIHKLNKLRHDLSSLLSSIPEETSDRVESEK 486

Query: 135 NKA-RATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKA 193
               R++AST +N +SSRSHS F+         GS+ + K   +N VDLAGSER   +++
Sbjct: 487 ASKLRSSASTKLNLRSSRSHSKFRD-----HLNGSNSSTKELSLNQVDLAGSERKV-SQS 540

Query: 194 TEERFKEGRNINLSLMTLGQVITNLSD 220
             E  +E +++N SL +LG VI  L  
Sbjct: 541 VGELLRETQSLNKSLSSLGDVIHALGS 567

Length = 568

>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 15/28 (53%), Positives = 22/28 (78%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+ATI+P   + EE+L+TLRYA +A+ I
Sbjct: 322 MIATISPADINYEETLSTLRYADRAKKI 349

KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively. Length = 356

>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 15/28 (53%), Positives = 23/28 (82%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A I+P  S+ EE+L+TLR+A +A+NI
Sbjct: 299 MIANISPSDSNYEETLSTLRFASRAKNI 326

Length = 326

>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 15/35 (42%), Positives = 25/35 (71%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTN 35
           M+A ++P  S++EE+L+TLR+A +A+ I  K   N
Sbjct: 301 MIANVSPSSSNLEETLSTLRFASRAKEIKNKPIVN 335

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division. Length = 335

>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A ++P  S+ EE+L TL+YA +ARNI
Sbjct: 313 MIACVSPADSNFEETLNTLKYANRARNI 340

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341

>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 14/28 (50%), Positives = 23/28 (82%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++ATI+P   ++EE+L+TL YA +A+NI
Sbjct: 316 IIATISPASINLEETLSTLEYAHRAKNI 343

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 352

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
KOG4280|consensus	574		100.0
cd01373	337	KISc_KLP2_like Kinesin motor domain, KLP2-like sub	100.0
cd01370	338	KISc_KIP3_like Kinesin motor domain, KIP3-like sub	100.0
KOG0240|consensus	607		100.0
KOG0242|consensus	675		100.0
cd01368	345	KISc_KIF23_like Kinesin motor domain, KIF23-like s	100.0
KOG0243|consensus	1041		100.0
cd01375	334	KISc_KIF9_like Kinesin motor domain, KIF9-like sub	100.0
cd01367	322	KISc_KIF2_like Kinesin motor domain, KIF2-like gro	100.0
PLN03188	1320	kinesin-12 family protein; Provisional	100.0
cd01371	333	KISc_KIF3 Kinesin motor domain, kinesins II or KIF	100.0
cd01376	319	KISc_KID_like Kinesin motor domain, KIF22/Kid-like	100.0
cd01365	356	KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p	100.0
KOG0245|consensus	1221		100.0
cd01369	325	KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy	100.0
cd01374	321	KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like	100.0
cd01372	341	KISc_KIF4 Kinesin motor domain, KIF4-like subfamil	100.0
cd01364	352	KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind	100.0
cd01366	329	KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/	100.0
KOG0239|consensus	670		100.0
cd00106	328	KISc Kinesin motor domain. This catalytic (head) d	100.0
smart00129	335	KISc Kinesin motor, catalytic domain. ATPase. Micr	100.0
PF00225	335	Kinesin: Kinesin motor domain; InterPro: IPR001752	100.0
KOG0247|consensus	809		100.0
KOG0246|consensus	676		100.0
KOG0241|consensus	1714		100.0
COG5059	568	KIP1 Kinesin-like protein [Cytoskeleton]	100.0
KOG0244|consensus	913		100.0
cd01363	186	Motor_domain Myosin and Kinesin motor domain. Thes	100.0
KOG4280|consensus	574		97.31
KOG0242|consensus	675		97.07
KOG0240|consensus	607		96.43
KOG0245|consensus	1221		96.32
KOG0239|consensus	670		95.49
KOG0241|consensus	1714		94.15
COG5059	568	KIP1 Kinesin-like protein [Cytoskeleton]	91.09
KOG0244|consensus	913		88.2

>KOG4280|consensus

Probab=100.00  E-value=2.6e-61  Score=429.35  Aligned_cols=232  Identities=41%  Similarity=0.593  Sum_probs=207.4

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC----CCCccccchhHHHhhccCCCC---c
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL----KETTGIIPRFCHQLFDQIPSN---M   74 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~----~~~~Gii~r~~~~Lf~~~~~~---~   74 (237)
                      .-+||+||...+.+  +|..+++|+|+++  |+|||+++||++|+||+++|    .+..|||||++++||..|++.   .
T Consensus        53 ~ftfD~vf~~~stQ~dvy~~~~~~lV~svl~GyNgtvFaYGQTGsGKTyTM~G~~~~~~GiiPraf~~LF~~I~~~~~~~  132 (574)
T KOG4280|consen   53 SFTFDAVFDSDSTQDDVYQETVAPLVESVLEGYNGTVFAYGQTGSGKTYTMIGPDPELRGLIPRAFEHLFRHIDERKEKT  132 (574)
T ss_pred             CceeeeeecCCCCHHHHHHHHhHHHHHHHhcccCceEEEeccCCCCCceEeeCCChhhCCchhHHHHHHHHHHHhccccc
Confidence            36899999977766  9999999988887  55555555555555444444    367899999999999999765   4


Q ss_pred             eEEEEEEEEEEecccccccccccc-ccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCce
Q psy17371         75 VAQVKISYLEIYNEFVYDLLSSER-KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSH  153 (237)
Q Consensus        75 ~~~v~vS~~EIy~e~v~DLL~~~~-~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH  153 (237)
                      .|.|++||+|||||+|+|||++.. +.+.++++++.|++|+|++++.|.+++++..++..|.++|.++++.+|..|||||
T Consensus       133 ~f~vrvS~lEiYnE~i~DLL~~~~~~~l~lre~p~~Gv~V~nlse~~v~s~~d~~~~l~~G~~nR~vgat~mn~~SsRSH  212 (574)
T KOG4280|consen  133 RFLVRVSYLEIYNESIRDLLSPVNPKGLELREDPKCGVYVENLSEMDVESAEDAQQLLVVGLANRRVGATSMNEESSRSH  212 (574)
T ss_pred             eEEEEeehHHHHhHHHHHHhCccCcCCceeeEcCCCceEecCcceeecCCHHHHHHHHHHHHhhcchhhccCCcccccce
Confidence            699999999999999999999985 6999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEEe-cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CCCCCCch
Q psy17371        154 SIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA-VPPYRNST  231 (237)
Q Consensus       154 ~v~~i~v~~~~-~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~-~vpyrdSk  231 (237)
                      +||+++|++.. ..++......|+|+||||||+||..++++.|.+++|+.+||+||++||+||.+|+++++ ||||||||
T Consensus       213 ~ift~~i~~~~~~~~~~~~~~~~rlnlvDLagsEr~~~tga~G~rlkEa~~IN~SLs~LG~vI~aLvd~~~~HIPYRdSk  292 (574)
T KOG4280|consen  213 AIFTIHIESSEKSDGGLMSGRSSKLNLVDLAGSERQSKTGAEGERLKEATNINLSLSALGNVISALVDGSKTHIPYRDSK  292 (574)
T ss_pred             EEEEEEEEeecccCCCccccccceeeeeeccchhhhcccCccchhhhhhcccchhHHHHHHHHHHHhccccCCCCcchhH
Confidence            99999999943 44455558899999999999999999999999999999999999999999999999998 99999999


Q ss_pred             hhhhcC
Q psy17371        232 LTYLLK  237 (237)
Q Consensus       232 LT~lLq  237 (237)
                      ||+|||
T Consensus       293 LT~LLq  298 (574)
T KOG4280|consen  293 LTRLLQ  298 (574)
T ss_pred             HHHHHH
Confidence            999997

>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup

Probab=100.00  E-value=2.6e-57  Score=392.16  Aligned_cols=231  Identities=38%  Similarity=0.540  Sum_probs=203.0

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCC--CCCCCccccchhHHHhhccCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDS--SLKETTGIIPRFCHQLFDQIP   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~--~~~~~~Gii~r~~~~Lf~~~~   71 (237)
                      ..||++|.....+  +|+..++|+++++           |++||||||||+|+....  ...+++||+||++++||+.++
T Consensus        43 f~FD~vf~~~~~q~~vy~~~~~p~v~~~~~G~n~ti~aYGqTGSGKTyTm~G~~~~~~~~~~~~~Giipr~~~~Lf~~i~  122 (337)
T cd01373          43 FTFDHVADSNTNQEDVFQSVGKPLVEDCLSGYNGSIFAYGQTGSGKTYTMMGPSSSDDESPHGLQGVIPRIFEYLFSLIQ  122 (337)
T ss_pred             EeCCeEeCCCCCHHHHHHHHHHHHHHHHhCCCceeEEEeCCCCCCceEEecCCCCccccccccCCCHHHHHHHHHHHHHH
Confidence            3578888655444  8888888866544           889999999999876432  123578999999999998875


Q ss_pred             C-------CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCC
Q psy17371         72 S-------NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTN  144 (237)
Q Consensus        72 ~-------~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~  144 (237)
                      .       ...|.|++||+|||+|+|+|||++....+.+++++.++++++|++++.|.|++|++++|..|.++|...++.
T Consensus       123 ~~~~~~~~~~~~~v~~S~~EIyne~v~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~t~  202 (337)
T cd01373         123 REEEKRGDGLKFLCKCSFLEIYNEQITDLLDPTSRNLKIREDIKKGVYVENLTEEYVSSYEDVYQVLLKGLSNRKVAATS  202 (337)
T ss_pred             hhhhhcccCceEEEEEEEEeecCCEeeeCCCCCCCCceEEECCCCCEEeCCCEEEEeCCHHHHHHHHHHHHhccCcccCc
Confidence            3       257899999999999999999999888899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhc----
Q psy17371        145 MNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD----  220 (237)
Q Consensus       145 ~n~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~----  220 (237)
                      +|..|||||+||+++|.+............|+|+||||||+||....+..+.+++|+..||+||++|++||.+|++    
T Consensus       203 ~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~s~l~~VDLAGSEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~aL~~~~~~  282 (337)
T cd01373         203 MNSESSRSHAVFTCTIESWEKKASSTNIRTSRLNLVDLAGSERQKDDGAEGVRLKEAKNINKSLSTLGHVIMALVDVAHG  282 (337)
T ss_pred             CCCCCCCccEEEEEEEEEeecCCCCCcEEEEEEEEEECCCCCcccccCCccHhhhhhccccHHHHHHHHHHHHHHhhccC
Confidence            9999999999999999987754444446789999999999999999999999999999999999999999999985    


Q ss_pred             CCCCCCCCCchhhhhcC
Q psy17371        221 HSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       221 ~~~~vpyrdSkLT~lLq  237 (237)
                      +++||||||||||+|||
T Consensus       283 ~~~~ipyR~SkLT~lL~  299 (337)
T cd01373         283 KQRHVPYRDSKLTFLLR  299 (337)
T ss_pred             CCCccCCcccHHHHHHH
Confidence            34799999999999996

Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second

>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup

Probab=100.00  E-value=2.7e-57  Score=392.20  Aligned_cols=226  Identities=35%  Similarity=0.534  Sum_probs=205.0

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....+  +|+..++|+++++           |++||||||||+|+.      +++|||||++++||+.+++
T Consensus        55 ~f~Fd~vf~~~~~q~~vf~~~~~plv~~~~~G~n~~i~ayGqtGSGKTyTm~G~~------~~~Giipr~~~~LF~~i~~  128 (338)
T cd01370          55 KYSFDRVFDETSTQEEVYENTTKPLVDGVLNGYNATVFAYGATGAGKTHTMLGTD------SDPGLMVLTMKDLFDKIEE  128 (338)
T ss_pred             EEEeccccCCCCCHHHHHHHHHHHHHHHHHCCCCceEEeeCCCCCCCeEEEcCCC------CCCchHHHHHHHHHHhhhh
Confidence            45678888665544  8998888877654           888888888888887      8899999999999998865


Q ss_pred             C---ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         73 N---MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        73 ~---~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                      .   +.+.|++||+|||+|+|+|||++..+.+.+++++.+++++.|++++.|.|++|++++|+.|.++|+..++.+|..|
T Consensus       129 ~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~S  208 (338)
T cd01370         129 RKDDKEFEVSLSYLEIYNETIRDLLSPSSGPLELREDPNQGIVVAGLTEHQPKSAEEILELLMKGNRNRTQEPTEANATS  208 (338)
T ss_pred             cccCceEEEEEEEEEEECCEEEECCCCCCCCceEEEcCCCCEEeCCcEEEEeCCHHHHHHHHHHHHhhcccccccccCcc
Confidence            4   7899999999999999999999988899999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecC-CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCC
Q psy17371        150 SRSHSIFQIQLTLTEDT-GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS---AVP  225 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~-~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~---~~v  225 (237)
                      ||||+||+|++.+.+.. ........|+|+||||||+||..+....+.+++|+..||+||.+|++||.+|+.++   .||
T Consensus       209 SRSH~i~~i~i~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~~L~~~~~~~~~i  288 (338)
T cd01370         209 SRSHAVLQITVRQKDRTASINQQVRIGKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALVDGKKKNKHI  288 (338)
T ss_pred             CcceEEEEEEEEEEecCCCCCCcEEEEEEEEEECCCCccccccCCCCccccccchhhHHHHHHHHHHHHHHhccCCCCcC
Confidence            99999999999998743 22333678999999999999999999999999999999999999999999999988   799


Q ss_pred             CCCCchhhhhcC
Q psy17371        226 PYRNSTLTYLLK  237 (237)
Q Consensus       226 pyrdSkLT~lLq  237 (237)
                      ||||||||+|||
T Consensus       289 pyR~SkLT~lL~  300 (338)
T cd01370         289 PYRDSKLTRLLK  300 (338)
T ss_pred             CCcCCHHHHHHH
Confidence            999999999996

The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a sec

>KOG0240|consensus

Probab=100.00  E-value=4.6e-57  Score=393.80  Aligned_cols=230  Identities=37%  Similarity=0.532  Sum_probs=210.0

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC------CCCccccchhHHHhhccCCCC--
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL------KETTGIIPRFCHQLFDQIPSN--   73 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~------~~~~Gii~r~~~~Lf~~~~~~--   73 (237)
                      ...||.||...+.+  ||+..+++|++.+  |+|||+++||+.|+||+|++      .+..||+||++++||..|.+.  
T Consensus        50 ~y~FDrVF~pnatQe~Vy~~~a~~Iv~dVL~GYNGTvfaYGqT~sGKTytm~G~~~d~~~~GIipRi~~diF~~Iys~~~  129 (607)
T KOG0240|consen   50 TYVFDRVFSPNATQEDVYEFAAKPIVDDVLLGYNGTVFAYGQTGSGKTYTMEGIGHDPEEMGIIPRILNDIFDHIYSMEE  129 (607)
T ss_pred             cceeeeecCCCccHHHHHHHHHHHHHHHHhcccceeEEEecCCCCCcceeecccCCChhhcCcHHHHHHHHHHHHhcCcc
Confidence            45689999877766  9999999999988  77777777777777777766      135699999999999988544  


Q ss_pred             -ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCc
Q psy17371         74 -MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRS  152 (237)
Q Consensus        74 -~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrs  152 (237)
                       ..|.|+|||+|||+|+++|||++.+.++.+++|....++++|+++..|.+++++++.++.|..+|....+.+|.+||||
T Consensus       130 n~efhVkVsy~EIYmEKi~DLL~~~k~nlsvheDK~~v~~vkG~t~~~v~s~d~v~~~i~~g~~nr~va~t~mn~~sSRS  209 (607)
T KOG0240|consen  130 NLEFHVKVSYFEIYMEKIRDLLDPEKTNLSVHEDKNRVPYVKGVTERFVSSPDEVLDVIDEGKSNRHVAVTNMNEHSSRS  209 (607)
T ss_pred             cceEEEEEEeehhhhhHHHHHhCcccCCceeecccCCCceecCceeEEecCHHHHHHHHhcccccchhhhcccccccccc
Confidence             6899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCCCch
Q psy17371        153 HSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYRNST  231 (237)
Q Consensus       153 H~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyrdSk  231 (237)
                      |.||+|+|.+.+.....  ...|+|++|||||+|+..++++.|.-+.|.+.||+||+||++||+||+++. .||||||||
T Consensus       210 HsIF~i~VkQ~n~e~~~--~~~gkLyLVDLaGSEkvsKtga~g~vleEaK~INkSLsaLgnvI~aLa~g~~shipYRDSK  287 (607)
T KOG0240|consen  210 HSIFLIHVKQENVEDKR--KLSGKLYLVDLAGSEKVSKTGAEGAVLEEAKNINKSLSALGNVINALAEGPKSHIPYRDSK  287 (607)
T ss_pred             ceEEEEEEEeccccchh--hccccEEEEEcccccccCCCCccchhHHHHhhhhhhHHHHHHHHHHHhcCCCCCCcchhhH
Confidence            99999999998844333  578999999999999999999999999999999999999999999999994 699999999


Q ss_pred             hhhhcC
Q psy17371        232 LTYLLK  237 (237)
Q Consensus       232 LT~lLq  237 (237)
                      |||+||
T Consensus       288 LTRILq  293 (607)
T KOG0240|consen  288 LTRILQ  293 (607)
T ss_pred             HHHHHH
Confidence            999996

>KOG0242|consensus

Probab=100.00  E-value=1.6e-57  Score=418.44  Aligned_cols=231  Identities=37%  Similarity=0.557  Sum_probs=209.7

Q ss_pred             ccCcccchhhhhhh--hHHHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC---CCCccccchhHHHhhccCCCC--c
Q psy17371          4 TINPLQSHIEESLA--TLRYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQLFDQIPSN--M   74 (237)
Q Consensus         4 ~~~~~~~~~~~~~~--~~~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~---~~~~Gii~r~~~~Lf~~~~~~--~   74 (237)
                      +...+||+||....  ..||+.+++|+++++  |+|||+++||++|+||++++   ..+|||+|+++.+||+.+...  +
T Consensus        52 ~~~y~FD~VF~~~~t~~~VYe~~tkpiv~~~l~G~N~TVFAYG~TgSGKTyTM~G~~~~PGii~la~~dif~~I~~~~~r  131 (675)
T KOG0242|consen   52 PEKYEFDRVFGEESTQEDVYERTTKPLLLSVLEGFNATVFAYGQTGSGKTYTMSGSEDDPGIIPLAMKDIFEKIDKSGER  131 (675)
T ss_pred             ccceeeeeecCCCCCHHHHHHhccHHHHHHHhcCcccceeeecCCCCCCceEEeccCCCCCeeehHHHHHHHHHHhcCCc
Confidence            46788999995555  449999999998888  67777666666666666666   477999999999999999775  5


Q ss_pred             eEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceE
Q psy17371         75 VAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS  154 (237)
Q Consensus        75 ~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~  154 (237)
                      .|.|.+||+|||||.|+|||++....+.+++|+.+++.|.||++..|.|++++..+|..|+++|+++.|.+|..|||||+
T Consensus       132 ~f~v~vSYlEIYNE~I~DLL~~~~~~L~irED~~~gi~V~gL~e~~v~s~e~~~~ll~~g~~~R~~g~T~~N~~SSRSHa  211 (675)
T KOG0242|consen  132 EFSVRVSYLEIYNERIRDLLNPDGGDLRLREDSEGGIVVPGLTEETVSSREELLELLQKGNKNRTTGETNLNEQSSRSHA  211 (675)
T ss_pred             eeEEEEEEEEEeccccccccCCCCCCceEeEcCCCCEEecCCeeecCCCHHHHHHHHHHhhccCcccccccccccchhhh
Confidence            99999999999999999999999888999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC--CCCCCCCchh
Q psy17371        155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS--AVPPYRNSTL  232 (237)
Q Consensus       155 v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~--~~vpyrdSkL  232 (237)
                      ||+|.+.+.......   ..++|+||||||+||...+++.|.+++||.+||+||.+|++||.+|+++.  +|||||||||
T Consensus       212 Il~i~i~s~~~~~~~---~~s~L~lIDLAGSERas~T~~~G~RlkEG~~INrSLlaLgtVI~~Ls~~~~~~hipYRDSKL  288 (675)
T KOG0242|consen  212 ILRITVESRGREASS---RVSKLNLIDLAGSERASRTGNEGVRLKEGAHINRSLLALGTVINKLSEGKRPRHIPYRDSKL  288 (675)
T ss_pred             eeeEEEEeccccccc---hhheehhhhhhhhhhhhhhhccceeccccchhhHHHHHHHHHHHHHccccccCCCCccccHH
Confidence            999999998744332   67899999999999999999999999999999999999999999999984  5999999999


Q ss_pred             hhhcC
Q psy17371        233 TYLLK  237 (237)
Q Consensus       233 T~lLq  237 (237)
                      |||||
T Consensus       289 TRiLq  293 (675)
T KOG0242|consen  289 TRLLQ  293 (675)
T ss_pred             HHhch
Confidence            99997

>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup

Probab=100.00  E-value=3.3e-56  Score=386.24  Aligned_cols=223  Identities=37%  Similarity=0.542  Sum_probs=199.4

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....+  +|+..++|+++.+           |++||||||||+|+.      +++|||||++++||+.+.+
T Consensus        56 ~f~Fd~vf~~~~tq~~vy~~~~~p~v~~~l~G~n~ti~aYGqtGSGKTyTm~G~~------~~~Gli~r~~~~lF~~~~~  129 (345)
T cd01368          56 KFSFSKVFGPNTTQKEFFEGTALPLVQDLLKGKNSLLFTYGVTNSGKTYTMQGSP------GDGGILPRSLDVIFNSIGG  129 (345)
T ss_pred             EeecCeEECCCCCHHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCCeEEecCCC------CCCchHHHHHHHHHHHHHh
Confidence            35678888655544  9998888876544           899999999999988      8899999999999999876


Q ss_pred             CceEEEEEEEEEEecccccccccccc------ccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         73 NMVAQVKISYLEIYNEFVYDLLSSER------KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        73 ~~~~~v~vS~~EIy~e~v~DLL~~~~------~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                         +.|++||+|||+|+|+|||++..      +.+.++++++++++++|++++.|.|++|+.++|..|.++|...++.+|
T Consensus       130 ---~~v~~S~~EIyne~v~DLL~~~~~~~~~~~~l~i~ed~~~~~~i~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~N  206 (345)
T cd01368         130 ---YSVFVSYVEIYNNYIYDLLEDSPSSTKKRQSLRLREDHNGNMYVAGLTEVEVSSTEEAREVFKRGQKNRRVAGTKLN  206 (345)
T ss_pred             ---eeEEEEEEEEeCCEeEeCCCCccccccCCCceEEEECCCCCEEecCCEEEEeCCHHHHHHHHHHhhccceeccccCc
Confidence               99999999999999999998753      469999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCC------CceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhc
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTG------SSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD  220 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~------~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~  220 (237)
                      ..|||||+||+|++.+.....      .......|+|+||||||+|+..+.+..+.+++|+..||+||++|++||.+|++
T Consensus       207 ~~SSRSH~i~~i~v~~~~~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~E~~~IN~SL~aL~~vi~aL~~  286 (345)
T cd01368         207 RESSRSHSVFTIKLVQAPGDSDGDVDQDKDQITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGKCIEVLRE  286 (345)
T ss_pred             CCCCCceEEEEEEEEEeccCcccccccCCCceEEEEEEEEecccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHh
Confidence            999999999999999876322      12335789999999999999999999999999999999999999999999987


Q ss_pred             ------CCCCCCCCCchhhhhcC
Q psy17371        221 ------HSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       221 ------~~~~vpyrdSkLT~lLq  237 (237)
                            +..||||||||||+|||
T Consensus       287 ~~~~~~~~~~iPyR~SkLT~lL~  309 (345)
T cd01368         287 NQLSGSTNKMVPYRDSKLTHLFQ  309 (345)
T ss_pred             hhcccCCCCcCCCcCCHHHHHHH
Confidence                  45799999999999996

Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, a

>KOG0243|consensus

Probab=100.00  E-value=2.3e-57  Score=420.54  Aligned_cols=231  Identities=38%  Similarity=0.545  Sum_probs=202.4

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCC--CCCCCccccchhHHHhhccCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDS--SLKETTGIIPRFCHQLFDQIP   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~--~~~~~~Gii~r~~~~Lf~~~~   71 (237)
                      .+||.||-..+.+  +|+.++.|++..+           |++||||||||.|.-...  .++++.|||||++.+||+.++
T Consensus        97 ftFDkVFGpes~Q~d~Y~~~v~p~i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIPRal~~IFd~Le  176 (1041)
T KOG0243|consen   97 FTFDKVFGPESQQEDLYDQAVSPIIKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKNGELPSEAGIIPRALRQIFDTLE  176 (1041)
T ss_pred             eecceeeCcchhHHHHHHHHHHHHHHHHhccCCceEEEecCCCCCceeeeecCcccccCCCCccCCcchHHHHHHHHHHH
Confidence            5788899555544  9999999977766           777777777777743222  235789999999999999997


Q ss_pred             CC-ceEEEEEEEEEEecccccccccccc---ccceeeecC-----CCCeeecCcEEEEecCHHHHHHHHHHHHhhCcccc
Q psy17371         72 SN-MVAQVKISYLEIYNEFVYDLLSSER---KALKVRESP-----DTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAS  142 (237)
Q Consensus        72 ~~-~~~~v~vS~~EIy~e~v~DLL~~~~---~~~~i~~~~-----~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~  142 (237)
                      .. .+|+|.|||+|+|||+++|||++..   +.+.+.+++     .+++.|+|+.++.|.++.|++++|.+|...|++++
T Consensus       177 ~~~~EYsvKVSfLELYNEEl~DLLa~~~~~~~~~~~k~~~~~~~~kggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAa  256 (1041)
T KOG0243|consen  177 AQGAEYSVKVSFLELYNEELTDLLASEDTSDKKLRIKDDSTIVDGKGGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAA  256 (1041)
T ss_pred             hcCCeEEEEEEehhhhhHHHHHhcCCccccccccccccCCcccCCcCcEEEecceeeeecchhHHHHHHHhhhhHhHHHH
Confidence            76 6999999999999999999999862   455555555     68899999999999999999999999999999999


Q ss_pred             CCCCCCCCCceEEEEEEEEEEe-cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcC
Q psy17371        143 TNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDH  221 (237)
Q Consensus       143 ~~~n~~ssrsH~v~~i~v~~~~-~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~  221 (237)
                      |.+|..|||||+||+|+|.... ..++....+.|+|++|||||||..+.+++.+.+.+|...||+||.+||+||.||.++
T Consensus       257 Tl~N~~SSRSHsIFsItvhike~t~~geelvK~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~  336 (1041)
T KOG0243|consen  257 TLMNDQSSRSHSIFSITVHIKENTPEGEELVKIGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEH  336 (1041)
T ss_pred             HHhhhhccccceEEEEEEEEecCCCcchhhHhhcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHcc
Confidence            9999999999999999998876 444555578999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhhhhcC
Q psy17371        222 SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       222 ~~~vpyrdSkLT~lLq  237 (237)
                      ..|||||+||||||||
T Consensus       337 s~HIPYRESKLTRLLQ  352 (1041)
T KOG0243|consen  337 SGHIPYRESKLTRLLQ  352 (1041)
T ss_pred             CCCCCchHHHHHHHHH
Confidence            9999999999999997

>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling

Probab=100.00  E-value=5.9e-55  Score=377.19  Aligned_cols=227  Identities=37%  Similarity=0.507  Sum_probs=204.0

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      ..||++|+. ..+  +|+..++|+++.+           |++||||||||+|+..+.   .++||+||++++||+.++..
T Consensus        50 f~FD~vf~~-~~q~~vy~~~~~p~v~~~~~G~n~~i~ayG~tgSGKTyTm~G~~~~~---~~~Glipr~~~~lf~~~~~~  125 (334)
T cd01375          50 FKFDGVFHN-ASQEEVYETVAKPVVDSALDGYNGTIFAYGQTGAGKTFTMTGGTESY---KDRGLIPRALEQVFREVAMR  125 (334)
T ss_pred             EEcCcccCC-CCHHHHHHHHHHHHHHHHhCCCccceeeecCCCCCCeEEccCCCCcc---cCCchHHHHHHHHHHHHHhc
Confidence            567888876 544  8888888866654           888888888888876433   67999999999999998654


Q ss_pred             --ceEEEEEEEEEEecccccccccccc------ccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCC
Q psy17371         74 --MVAQVKISYLEIYNEFVYDLLSSER------KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNM  145 (237)
Q Consensus        74 --~~~~v~vS~~EIy~e~v~DLL~~~~------~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~  145 (237)
                        ..+.|++||+|||+|+++|||++..      +.+.+++++.++++++|++++.|.+++|++.++..|..+|...++.+
T Consensus       126 ~~~~~~v~~S~~Eiy~e~v~DLL~~~~~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~~~~~g~~~R~~~~t~~  205 (334)
T cd01375         126 ATKTYTVHVSYLEIYNEQLYDLLGDTPEALESLPAVTILEDSEQNIHVKGLSLHSATTEEEALNLLFLGETNRTIAETSM  205 (334)
T ss_pred             cCcceEEEEEEEEEECCEeecCCCCCccccccCCceEEEEcCCCCEEeCCcEEEEeCCHHHHHHHHHHHHhhcccccCcC
Confidence              5789999999999999999999873      67899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CC
Q psy17371        146 NDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AV  224 (237)
Q Consensus       146 n~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~  224 (237)
                      |..|||||+||+++|.+.+..........|+|+||||||+|+..+.+..+..++|+..||+||++|++||.+|++++ .|
T Consensus       206 n~~sSRSH~i~~l~v~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~~~~~~e~~~iN~SL~~L~~vi~~l~~~~~~~  285 (334)
T cd01375         206 NQASSRSHCIFTIHLESRSREAGSEVVRLSKLNLVDLAGSERVSKTGVSGQVLKEAKYINKSLSFLEQVINALSEKARTH  285 (334)
T ss_pred             cCCcCcCeEEEEEEEEEEecCCCCCceEEEEEEEEECCCCCccccccCchhhhhhhhhhhhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999864445555788999999999999999999999999999999999999999999999999 89


Q ss_pred             CCCCCchhhhhcC
Q psy17371        225 PPYRNSTLTYLLK  237 (237)
Q Consensus       225 vpyrdSkLT~lLq  237 (237)
                      |||||||||+|||
T Consensus       286 ipyRdSkLT~lL~  298 (334)
T cd01375         286 VPYRNSKLTHVLR  298 (334)
T ss_pred             CCCcccHHHHHHH
Confidence            9999999999996

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80

>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group

Probab=100.00  E-value=8.1e-55  Score=374.60  Aligned_cols=220  Identities=31%  Similarity=0.445  Sum_probs=199.0

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....+  +|+..++|+++.+           |++||||||||+|+.      +++||+||++++||+.+++
T Consensus        52 ~f~FD~vf~~~~~q~~vf~~~~~plv~~~~~G~n~~i~ayGqtGSGKTyTm~G~~------~~~Glipr~~~~lf~~~~~  125 (322)
T cd01367          52 TFRFDYVFDEAVTNEEVYRSTVKPLIPHVFEGGVATCFAYGQTGSGKTYTMLGDE------NQEGLYALAARDIFRLLAQ  125 (322)
T ss_pred             eEecceEECCCCCHHHHHHHHHHHHHHHHhCCCceEEEeccCCCCCCceEecCcC------CcCccHHHHHHHHHHHHhc
Confidence            45778888665544  9999888877655           778888888888777      8899999999999999876


Q ss_pred             C-ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCC
Q psy17371         73 N-MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSR  151 (237)
Q Consensus        73 ~-~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssr  151 (237)
                      . .++.|++||+|||+|+++|||++ .+.+.+++++.++++++|+++++|.|++|++++|+.|.++|...++.+|..|||
T Consensus       126 ~~~~~~v~~S~~EIy~e~v~DLL~~-~~~l~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSR  204 (322)
T cd01367         126 PNDDLGVTVSFFEIYGGKLFDLLND-RKRLSVLEDGKGNVQIVGLTEKPVTSVDELLELIESGNSLRTTGSTGANDQSSR  204 (322)
T ss_pred             cccccEEEEEEEeeecCchhhhccC-ccceeEEEcCCCCEEeCCCEEEEeCCHHHHHHHHHHHhcccccccCcCCCCccc
Confidence            5 67899999999999999999988 678999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcC-chhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCCc
Q psy17371        152 SHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK-ATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNS  230 (237)
Q Consensus       152 sH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrdS  230 (237)
                      ||+||++++.+...     ....|+|+||||||+|+..... ..+.+.+|+..||+||++|++||.+|+++++|||||||
T Consensus       205 SH~i~~i~v~~~~~-----~~~~s~l~~vDLAGsE~~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~al~~~~~~iPyRdS  279 (322)
T cd01367         205 SHAILQIILKNKKL-----NKLLGKLSFIDLAGSERGADTSEHDRQTRKEGAEINKSLLALKECIRALASNKAHVPFRGS  279 (322)
T ss_pred             ceEEEEEEEEEecC-----CeeEEEEEEeecCCccccccccccchhhHHhHhHHhHHHHHHHHHHHHHhcCCCcCCCccC
Confidence            99999999998764     2568999999999999988755 46789999999999999999999999999999999999


Q ss_pred             hhhhhcC
Q psy17371        231 TLTYLLK  237 (237)
Q Consensus       231 kLT~lLq  237 (237)
                      |||+|||
T Consensus       280 kLT~lL~  286 (322)
T cd01367         280 KLTQVLR  286 (322)
T ss_pred             HHHHHHH
Confidence            9999996

KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and lo

>PLN03188 kinesin-12 family protein; Provisional

Probab=100.00  E-value=4.9e-55  Score=409.24  Aligned_cols=232  Identities=34%  Similarity=0.501  Sum_probs=200.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCC----CCCCCCccccchhHHHhhc
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLD----SSLKETTGIIPRFCHQLFD   68 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~----~~~~~~~Gii~r~~~~Lf~   68 (237)
                      ...||+||.....+  ||+..++|+++++           |++||||||||+|+...    .....++|||||++++||+
T Consensus       133 tFtFD~VFdp~aTQedVFe~vv~PLV~svLdGyNaTIFAYGQTGSGKTYTM~G~~~~~~de~~s~~e~GIIPRaledLF~  212 (1320)
T PLN03188        133 TFTFDSIADPESTQEDIFQLVGAPLVENCLAGFNSSVFAYGQTGSGKTYTMWGPANGLLEEHLSGDQQGLTPRVFERLFA  212 (1320)
T ss_pred             EEeCCeeeCCCCCHHHHHHHHHHHHHHHHhcCCcceeecCCCCCCCCCEeeCCCCCcccccccccccCCchHHHHHHHHH
Confidence            35678888655544  8888888865543           88888888888886421    1113678999999999999


Q ss_pred             cCCC--------CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCcc
Q psy17371         69 QIPS--------NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARAT  140 (237)
Q Consensus        69 ~~~~--------~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~  140 (237)
                      .+..        ...|.|++||+|||||+|+|||++....+.+++++.++++|.|++++.|.|++++.++|..|.++|+.
T Consensus       213 ~I~e~q~k~~d~~~~y~V~vSyLEIYNEkI~DLLsp~~k~L~IRED~kgGv~VeGLTEv~V~S~ED~l~LL~~G~~nR~t  292 (1320)
T PLN03188        213 RINEEQIKHADRQLKYQCRCSFLEIYNEQITDLLDPSQKNLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRT  292 (1320)
T ss_pred             HHHhhhhhccccccceEEEEEEEeeecCcceeccccccCCceEEEcCCCCeEeCCCeEEeCCCHHHHHHHHHHHhcccee
Confidence            8753        25789999999999999999999988889999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCceEEEEEEEEEEec--CCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHh
Q psy17371        141 ASTNMNDKSSRSHSIFQIQLTLTED--TGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNL  218 (237)
Q Consensus       141 ~~~~~n~~ssrsH~v~~i~v~~~~~--~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL  218 (237)
                      ++|.+|..|||||+||+|.|.+...  ..+......|+|+||||||+||...++..|.+++|+..||+||++|++||.+|
T Consensus       293 asT~mN~~SSRSHaIFtI~Ves~~k~~~dg~ss~r~SkLnLVDLAGSER~kkTga~G~RLkEA~~INKSLsaLGnVI~AL  372 (1320)
T PLN03188        293 GATSINAESSRSHSVFTCVVESRCKSVADGLSSFKTSRINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINIL  372 (1320)
T ss_pred             ccCCCCCccCCCceeEEEEEEEeecccCCCCcceEEEEEEEEECCCchhccccCcccHHHHHHHHHhHHHHHHHHHHHHH
Confidence            9999999999999999999987652  22222356899999999999999999999999999999999999999999999


Q ss_pred             hc-----CCCCCCCCCchhhhhcC
Q psy17371        219 SD-----HSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       219 ~~-----~~~~vpyrdSkLT~lLq  237 (237)
                      +.     +.+||||||||||+|||
T Consensus       373 ae~Sq~gk~~HIPYRDSKLTrLLQ  396 (1320)
T PLN03188        373 AEISQTGKQRHIPYRDSRLTFLLQ  396 (1320)
T ss_pred             HHhhccCCCCcCCCCcchHHHHHH
Confidence            85     23699999999999996

>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins

Probab=100.00  E-value=3.2e-54  Score=372.61  Aligned_cols=229  Identities=41%  Similarity=0.594  Sum_probs=203.8

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....+  +|+..++|+++.+           |++||||||||+|+....   +++|||||++++||+.+++
T Consensus        49 ~f~fd~vf~~~~~q~~vy~~~~~plv~~~~~G~n~~i~ayG~tgSGKTyTm~G~~~~~---~~~Glipr~~~~Lf~~~~~  125 (333)
T cd01371          49 VFTFDAVYDPNSTQEDVYNETARPLVDSVLEGYNGTIFAYGQTGTGKTFTMEGVREPP---ELRGIIPNSFAHIFGHIAK  125 (333)
T ss_pred             eeeeccccCCCccHHHHHHHHHHHHHHHHhCCCceeEEecCCCCCCCcEeecCCCCcc---cccchHHHHHHHHHHHHhh
Confidence            35678888665544  8888888876655           888888888888877433   5899999999999998865


Q ss_pred             C--ceEEEEEEEEEEecccccccccccc-ccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         73 N--MVAQVKISYLEIYNEFVYDLLSSER-KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        73 ~--~~~~v~vS~~EIy~e~v~DLL~~~~-~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                      .  ..+.|.+||+|||+|+|+|||++.. +.+.+++++.++++++|++++.|.|++|+..++..|.++|...++..|..|
T Consensus       126 ~~~~~~~v~~S~~Eiy~e~v~DLL~~~~~~~l~i~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~s  205 (333)
T cd01371         126 AENVQFLVRVSYLEIYNEEVRDLLGKDQKKKLELKERPDRGVYVKDLSMFVVKNAEEMDKLMTLGNKNRSVGATNMNEDS  205 (333)
T ss_pred             ccCccEEEEEEEEEeeCCeeeeCCCCCCCCceeEEEcCCCCEEeCCCEEEEeCCHHHHHHHHHHHHhhCccccccccCCC
Confidence            4  6789999999999999999999874 689999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecC-CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CCCC
Q psy17371        150 SRSHSIFQIQLTLTEDT-GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA-VPPY  227 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~-~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~-~vpy  227 (237)
                      ||||+||+|+|.+.+.. .+......|+|+||||||+|+..+.+..+.+++|+..||+||.+|++||.+|+++++ ||||
T Consensus       206 sRSH~i~~i~v~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~iN~sL~~L~~vi~al~~~~~~~ipy  285 (333)
T cd01371         206 SRSHSIFTITIECSEKGEDGENHIRVGKLNLVDLAGSERQSKTGATGDRLKEATKINLSLSALGNVISALVDGKSTHIPY  285 (333)
T ss_pred             CCCcEEEEEEEEEEeccCCCCCcEEEEEEEEEECCCCCcccccCCchhhhHhHhhhhhHHHHHHHHHHHHHhCCCCcCCC
Confidence            99999999999988743 233336789999999999999999989999999999999999999999999999886 9999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       286 R~SkLT~lL~  295 (333)
T cd01371         286 RDSKLTRLLQ  295 (333)
T ss_pred             ccCHHHHHHH
Confidence            9999999996

Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain

>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup

Probab=100.00  E-value=2.5e-54  Score=371.26  Aligned_cols=222  Identities=33%  Similarity=0.465  Sum_probs=201.3

Q ss_pred             Ccccchhhhhhhh--HHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLAT--LRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~--~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....  .+|+..+.|+++.+           |++||||||||+|+.      .++|||||++++||+.+++
T Consensus        48 ~f~FD~vf~~~~~q~~vy~~~~~plv~~~~~G~n~~i~ayG~tgSGKTyTm~G~~------~~~Glipr~~~~Lf~~~~~  121 (319)
T cd01376          48 KYQFDAFYGTECTQEDIFSREVKPIVPHLLSGQNATVFAYGSTGAGKTHTMLGDP------NEPGLIPRTLSDLLRMGRK  121 (319)
T ss_pred             EEecCeEECCCCCHHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCCcEEEeCCc------CccchHHHHHHHHHHHHhh
Confidence            3458888854443  38888888866655           888888888888887      7899999999999998865


Q ss_pred             C-ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCC
Q psy17371         73 N-MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSR  151 (237)
Q Consensus        73 ~-~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssr  151 (237)
                      . +.+.|++||+|||+|+|+|||++....+.+++++.+++++.|+++++|.|++|+.+++..|.++|...++.+|..|||
T Consensus       122 ~~~~~~v~~S~~EIy~e~v~DLL~~~~~~l~i~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~SSR  201 (319)
T cd01376         122 QAWTGAFSMSYYEIYNEKVYDLLEPAKKELPIREDKDGNILIVGLTSKPIKSMAEFEEAYIPASKNRTVAATKLNDNSSR  201 (319)
T ss_pred             ccccceEEEEEEEEECCEeeEccCCCCCCceEEEcCCCCEEeeCCEEEEeCCHHHHHHHHHHHHhhhccccCcCCCccCC
Confidence            4 789999999999999999999998888999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCCch
Q psy17371        152 SHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNST  231 (237)
Q Consensus       152 sH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrdSk  231 (237)
                      ||+||++.+.+.....    ...|+|+||||||+|+....+..+.+++|+..||+||++|++||.+|+.+.+|||||||+
T Consensus       202 SH~i~~i~v~~~~~~~----~~~s~l~~VDLAGsE~~~~~~~~g~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~ipyr~S~  277 (319)
T cd01376         202 SHAVLRIKVTQPASNI----QLEGKLNLIDLAGSEDNRRTGNEGIRLKESAAINSSLFVLSKVVDALNKGLPRIPYRESK  277 (319)
T ss_pred             CeEEEEEEEEEECCCc----eEEEEEEEEECCCCCcccccCCccchhhhhhhhhhhHHHHHHHHHHHhcCCCcCCCccCH
Confidence            9999999999876422    568999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcC
Q psy17371        232 LTYLLK  237 (237)
Q Consensus       232 LT~lLq  237 (237)
                      ||+|||
T Consensus       278 LT~lL~  283 (319)
T cd01376         278 LTRLLQ  283 (319)
T ss_pred             HHHHHH
Confidence            999996

Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through

>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins

Probab=100.00  E-value=4.7e-54  Score=374.71  Aligned_cols=225  Identities=48%  Similarity=0.682  Sum_probs=198.8

Q ss_pred             cccchhhhhh---------hhHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHh
Q psy17371          7 PLQSHIEESL---------ATLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQL   66 (237)
Q Consensus         7 ~~~~~~~~~~---------~~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~L   66 (237)
                      -.||++|...         +..+|+..++|+++.+           |++||||||||+|+.      .++|||||++++|
T Consensus        50 f~FD~vf~~~~~~~~~~~tq~~vf~~~~~p~v~~~l~G~n~~i~ayGqtGSGKT~Tm~G~~------~~~Gli~r~~~~L  123 (356)
T cd01365          50 FSFDHSYWSHDSEDPHYASQEDVFEDLGRELLDHAFEGYNVCLFAYGQTGSGKSYTMMGYK------EEKGIIPRLCEEL  123 (356)
T ss_pred             EECCeEecccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCCeEEecCCC------CCCchHHHHHHHH
Confidence            4577777433         3448888777766544           888888888888887      6899999999999


Q ss_pred             hccCCCC----ceEEEEEEEEEEecccccccccccc---ccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCc
Q psy17371         67 FDQIPSN----MVAQVKISYLEIYNEFVYDLLSSER---KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARA  139 (237)
Q Consensus        67 f~~~~~~----~~~~v~vS~~EIy~e~v~DLL~~~~---~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~  139 (237)
                      |+.++..    ..+.|++||+|||+|+|+|||++..   ..+.+++++..+++++|++++.|.|++|+.+++..|.++|.
T Consensus       124 f~~~~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~~l~i~~~~~~g~~v~gl~~~~v~s~~e~~~~l~~g~~~R~  203 (356)
T cd01365         124 FQRIESKKEQNLSYEVEVSYMEIYNEKVRDLLNPKKKNKGNLKVREHPVLGPYVEDLSKVAVTSYEDIQNLLEEGNKSRT  203 (356)
T ss_pred             HHHHhhccccCceEEEEEEEEEEECCeeeeCCCCCccCCcCceEEECCCCCEEeCCCEEEEeCCHHHHHHHHHHHHhccc
Confidence            9988654    5789999999999999999999863   67999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCceEEEEEEEEEEecC--CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHH
Q psy17371        140 TASTNMNDKSSRSHSIFQIQLTLTEDT--GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN  217 (237)
Q Consensus       140 ~~~~~~n~~ssrsH~v~~i~v~~~~~~--~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~a  217 (237)
                      ..++.+|..|||||+||++++.+....  ........|+|+||||||+|+....+..+.+++|+..||+||++|++||.+
T Consensus       204 ~~~t~~n~~SSRSH~i~~l~v~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~~~~~~E~~~IN~SL~aL~~vi~~  283 (356)
T cd01365         204 TASTNMNDTSSRSHAVFTIVLTQKKLDKETDLTTEKVSKISLVDLAGSERASSTGAEGDRLKEGSNINKSLTTLGKVISA  283 (356)
T ss_pred             ccCCCCCCCcCCceEEEEEEEEEEecccCCCCCceEEEEEEeeecccccccccccccchhhHHHHHHhHHHHHHHHHHHH
Confidence            999999999999999999999987633  233446799999999999999999999999999999999999999999999


Q ss_pred             hhcC--------CCCCCCCCchhhhhcC
Q psy17371        218 LSDH--------SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       218 L~~~--------~~~vpyrdSkLT~lLq  237 (237)
                      |+.+        +.||||||||||+|||
T Consensus       284 l~~~~~~~~~~~~~~ipyR~SkLT~lL~  311 (356)
T cd01365         284 LADNSSAKSKKKSSFIPYRDSVLTWLLK  311 (356)
T ss_pred             HHhcccccccCCCCcCCCcCcHHHHHHH
Confidence            9875        3699999999999996

KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.

>KOG0245|consensus

Probab=100.00  E-value=1.1e-55  Score=403.99  Aligned_cols=218  Identities=45%  Similarity=0.720  Sum_probs=193.5

Q ss_pred             HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC-----CCCccccchhHHHhhccCCCC----ceEEEEEEEEEEecc
Q psy17371         20 RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL-----KETTGIIPRFCHQLFDQIPSN----MVAQVKISYLEIYNE   88 (237)
Q Consensus        20 ~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~-----~~~~Gii~r~~~~Lf~~~~~~----~~~~v~vS~~EIy~e   88 (237)
                      ||+..|+++++..  |+|.|.++||++|+||++++     ++++|||||++++||.++..+    ..|.|.|||+|||+|
T Consensus        71 VYedlg~~mL~~AfEGYN~ClFAYGQTGSGKSYTMMG~~~~~e~GIIPrlCEeLF~ri~~nq~~~~sy~VevSymEIYcE  150 (1221)
T KOG0245|consen   71 VYEDLGREMLDHAFEGYNVCLFAYGQTGSGKSYTMMGFQEPDEPGIIPRLCEELFSRIADNQSQQMSYSVEVSYMEIYCE  150 (1221)
T ss_pred             HHHHHhHHHHHHHhcccceEEEEeccCCCCcceeeeccCCCCCCCchhHHHHHHHHHHhhcccccceEEEEEeehhHHHH
Confidence            8888888865544  55555555555555555555     378999999999999999655    899999999999999


Q ss_pred             ccccccc-cc-cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceEEEEEEEEEEe--
Q psy17371         89 FVYDLLS-SE-RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTE--  164 (237)
Q Consensus        89 ~v~DLL~-~~-~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~v~~i~v~~~~--  164 (237)
                      .|+|||+ |. ++.++++|.|..|++|.+|+...|+|..|+.++++.|++.|++++|.||..|||||+||+|...|..  
T Consensus       151 rVrDLL~~p~~kg~LRVREHP~lGPYVedLS~~aV~Sy~dI~~~md~GNkqRTtAATnMNdtSSRSHaVFtIvftQk~~~  230 (1221)
T KOG0245|consen  151 RVRDLLNAPKSKGGLRVREHPILGPYVEDLSKLAVTSYADIQDLMDEGNKQRTTAATNMNDTSSRSHAVFTIVFTQKKHD  230 (1221)
T ss_pred             HHHHHhhCCCCCCCceeeccCccChhHhHhhhcccccHHHHHHHHHhcchhhhhhhhccccccccceeEEEEEEEeeecc
Confidence            9999999 54 7889999999999999999999999999999999999999999999999999999999999999987  


Q ss_pred             cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCC-------CCCCCCchhhhhcC
Q psy17371        165 DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA-------VPPYRNSTLTYLLK  237 (237)
Q Consensus       165 ~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~-------~vpyrdSkLT~lLq  237 (237)
                      ...+-...++|++++||||||||...+++.|.++|||..|||||.+||.||.||++.++       +||||||.||+|||
T Consensus       231 ~~~~l~sek~SKIsLVDLAGSERasstGa~G~RLKEGa~INKSLtTLGkVISALAe~~~~k~~ks~fIPYRDSVLTWLLk  310 (1221)
T KOG0245|consen  231 QDTGLDSEKVSKISLVDLAGSERASSTGANGDRLKEGANINKSLTTLGKVISALAESQKGKKKKSDFIPYRDSVLTWLLK  310 (1221)
T ss_pred             ccCCCcceeeeeeeEEeccCcccccccCCCccchhcccccchHHHHHHHHHHHHHHHhccCCCCCccccchHHHHHHHHH
Confidence            33333357899999999999999999999999999999999999999999999987552       99999999999996

>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup

Probab=100.00  E-value=1.1e-53  Score=368.63  Aligned_cols=227  Identities=40%  Similarity=0.560  Sum_probs=203.5

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....+  +|+..++|+++.+           |++||||||||+|+....   +++||+||++++||+.+.+
T Consensus        44 ~f~FD~vf~~~~~q~~vy~~~~~~~v~~~~~G~n~~i~ayG~tgSGKT~Tm~G~~~~~---~~~Giipr~~~~Lf~~~~~  120 (325)
T cd01369          44 TFSFDRVFPPNTTQEDVYNFVAKPIVDDVLNGYNGTIFAYGQTGSGKTYTMEGPPGDP---ELKGIIPRIVHDIFEHISS  120 (325)
T ss_pred             EEEcCeEECCCCCHHHHHHHHHHHHHHHHHcCccceEEEeCCCCCCceEEecCCCCcc---ccCChHHHHHHHHHHHHhh
Confidence            34677788554444  8888888876654           999999999999988432   5899999999999998754


Q ss_pred             C---ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         73 N---MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        73 ~---~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                      .   .++.|++||+|||+|+++|||++.+..+.+++++.++++++|++++.|.|++|+.++|..|.++|...++.+|..|
T Consensus       121 ~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~l~i~~~~~~~~~v~gl~~~~v~s~~e~~~~i~~~~~~R~~~~t~~n~~s  200 (325)
T cd01369         121 MDENLEFHVKVSYLEIYMEKIRDLLDVSKDNLQVHEDKNRGVYVKGLTERFVSSPEEVLEVINEGKSNRAVASTNMNEES  200 (325)
T ss_pred             ccCCceEEEEEEEEEEECCChhhcccCccCCceEEEcCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccCcCCCcc
Confidence            3   6799999999999999999999988889999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYR  228 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyr  228 (237)
                      ||||+||+|+|.+.+.....  ...|+|+||||||+|+..+.+..+.+++|+..||+||++|++||.+|++++ +|||||
T Consensus       201 sRSH~i~~i~v~~~~~~~~~--~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~~vpyR  278 (325)
T cd01369         201 SRSHSIFLITLKQENVETGS--KKRGKLFLVDLAGSEKVSKTGAEGQTLEEAKKINKSLSALGNVINALTDGKSTHIPYR  278 (325)
T ss_pred             ccccEEEEEEEEEEecCCCC--EEEEEEEEEECCCCCcccccCCcchhHHHHHHHhHHHHHHHHHHHHHHcCCCCcCCCc
Confidence            99999999999987743332  568999999999999999999999999999999999999999999999988 899999


Q ss_pred             CchhhhhcC
Q psy17371        229 NSTLTYLLK  237 (237)
Q Consensus       229 dSkLT~lLq  237 (237)
                      ||+||+|||
T Consensus       279 ~S~LT~lL~  287 (325)
T cd01369         279 DSKLTRILQ  287 (325)
T ss_pred             cCHHHHHHH
Confidence            999999996

Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-c

>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis

Probab=100.00  E-value=6.2e-54  Score=369.40  Aligned_cols=225  Identities=38%  Similarity=0.558  Sum_probs=200.2

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|......  +|+..++|+++.+           |++||||||||+|+.      .++||+||++++||+.+.+
T Consensus        41 ~f~fd~vf~~~~~q~~vy~~~~~p~v~~~l~G~n~~i~ayG~tgSGKT~T~~G~~------~~~Gli~r~~~~lf~~~~~  114 (321)
T cd01374          41 SFTFDRVFGGESTNREVYERIAKPVVRSALEGYNGTIFAYGQTSSGKTFTMSGDE------QEPGIIPLAVRDIFQRIQD  114 (321)
T ss_pred             EEecCeEECCCCCHHHHHHHHHHHHHHHHHCCCceeEEeecCCCCCCceeccCCC------CCCchHHHHHHHHHHHHhc
Confidence            44677888665433  8888888866654           777777777777776      7899999999999998854


Q ss_pred             C--ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCC
Q psy17371         73 N--MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS  150 (237)
Q Consensus        73 ~--~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ss  150 (237)
                      .  .++.|++||+|||+|+|+|||++....+++++++.++++++|++++.|.|++|+.++|..|.++|...++..|..||
T Consensus       115 ~~~~~~~v~~S~~Eiy~e~v~DLL~~~~~~l~i~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ss  194 (321)
T cd01374         115 TPDREFLLRVSYLEIYNEKIKDLLSPSPQELRIREDPNKGVVVAGLTEEIVTSPEHLLQLIARGEKNRHVGETDFNERSS  194 (321)
T ss_pred             ccCceEEEEEEEEEEEcCEeEEccCCCCCCceEEECCCCCEEeCCceEEEeCCHHHHHHHHHHHHhccccccCcCCCccc
Confidence            3  68899999999999999999999888999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEEEEecCC-CceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC--CCCCC
Q psy17371        151 RSHSIFQIQLTLTEDTG-SSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS--AVPPY  227 (237)
Q Consensus       151 rsH~v~~i~v~~~~~~~-~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~--~~vpy  227 (237)
                      |||+||+|+|.+..... .......|+|+||||||+|+..+.+ .+.+++|+..||+||.+|++||.+|++++  +||||
T Consensus       195 RSH~i~~i~v~~~~~~~~~~~~~~~s~l~~vDLAGsE~~~~~~-~~~~~~e~~~iN~Sl~~L~~vi~al~~~~~~~~vpy  273 (321)
T cd01374         195 RSHTIFQLTIESRERGDSESGTVRVSTLNLIDLAGSERASQTG-AGERRKEGSFINKSLLTLGTVISKLSEGKNSGHIPY  273 (321)
T ss_pred             cccEEEEEEEEEEecCCCCCCcEEEEEEEEEECCCCCccccCC-CCccccccchhhhHHHHHHHHHHHHHhcCCCCcCCC
Confidence            99999999999987433 2333678999999999999999887 88999999999999999999999999996  89999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       274 R~SkLT~lL~  283 (321)
T cd01374         274 RDSKLTRILQ  283 (321)
T ss_pred             cCCHHHHHHH
Confidence            9999999996

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to

>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily

Probab=100.00  E-value=2.8e-53  Score=368.36  Aligned_cols=232  Identities=37%  Similarity=0.515  Sum_probs=204.4

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|.....+  +|+..++|+++.+           |++||||||||+|+.......+++|||||++++||+.+++
T Consensus        41 ~f~FD~vf~~~~~q~~vy~~~~~plv~~~~~G~n~~i~ayG~tgSGKT~Tm~G~~~~~~~~~~~Giipr~~~~LF~~~~~  120 (341)
T cd01372          41 SFTFDYVFDPSTSQEEVYNTCVAPLVDGLFEGYNATVLAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKIDE  120 (341)
T ss_pred             EEeccccCCCCCCHHHHHHHHHHHHHHHHhCCCccceeeecCCCCCCcEEecCCCccccccccCChHHHHHHHHHHHHHh
Confidence            34678888655544  8888888866555           8888888888888764322247899999999999998865


Q ss_pred             C---ceEEEEEEEEEEeccccccccccc---cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         73 N---MVAQVKISYLEIYNEFVYDLLSSE---RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        73 ~---~~~~v~vS~~EIy~e~v~DLL~~~---~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                      .   .++.|++||+|||+|+|+|||++.   ...+.+++++.+++++.|++++.|.|++|++++|..|.++|...++.+|
T Consensus       121 ~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~l~i~e~~~~~~~i~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n  200 (341)
T cd01372         121 KKDEPDFQLKVSFLELYNEEVRDLLSPSTSEKSPIQIREDSKGNIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMN  200 (341)
T ss_pred             ccccceEEEEEEEEEeECCeeecCCCCcccCCCCceEEECCCCCEecCCCEEEEECCHHHHHHHHHHHHHhcccccccCC
Confidence            4   579999999999999999999986   5789999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCC--------CceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHh
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTG--------SSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNL  218 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~--------~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL  218 (237)
                      ..|||||+||+|+|.+.....        .......|+|+||||||+|+..+....+.+++|+..||+||.+|++||.+|
T Consensus       201 ~~sSRsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~in~sl~aL~~vi~al  280 (341)
T cd01372         201 SQSSRSHAIFTITLEQTRKNGPIAPMSGDDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISAL  280 (341)
T ss_pred             CccCcCcEEEEEEEEEEecCCccccccccCCCceeeEEEEEEECCCCcccccccCchhHhHHHHHHhHHHHHHHHHHHHH
Confidence            999999999999999987431        223367899999999999999999999999999999999999999999999


Q ss_pred             hcCC---CCCCCCCchhhhhcC
Q psy17371        219 SDHS---AVPPYRNSTLTYLLK  237 (237)
Q Consensus       219 ~~~~---~~vpyrdSkLT~lLq  237 (237)
                      +.++   .||||||||||+|||
T Consensus       281 ~~~~~~~~~ipyR~S~LT~lL~  302 (341)
T cd01372         281 GDESKKGSHVPYRDSKLTRLLQ  302 (341)
T ss_pred             HhcCCCCCCCCCcccHHHHHHH
Confidence            9987   699999999999996

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain,

>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division

Probab=100.00  E-value=2.5e-53  Score=369.91  Aligned_cols=232  Identities=40%  Similarity=0.564  Sum_probs=204.3

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCC-----CCCCCccccchhHHHhh
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDS-----SLKETTGIIPRFCHQLF   67 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~-----~~~~~~Gii~r~~~~Lf   67 (237)
                      ...||++|.....+  +|+..+.|+++.+           |++||||||||+|..+..     ...+++|||||++++||
T Consensus        49 ~f~Fd~vf~~~~~q~~vy~~~~~plv~~~~~G~n~~i~ayG~tgSGKTyTl~G~~~~~~~~~~~~~~~~Glipr~~~~Lf  128 (352)
T cd01364          49 TYTFDKVFGPEADQIEVYSQVVSPILDEVLMGYNCTIFAYGQTGTGKTYTMEGDRTDNKGSTWELSPHAGIIPRALYQLF  128 (352)
T ss_pred             eEeccccCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCCCCCCCcEEecCCCcccccccccccccCCchHHHHHHHH
Confidence            35678888654443  8998888876644           899999999999986442     11467999999999999


Q ss_pred             ccCCCC-ceEEEEEEEEEEeccccccccccc---cccceeeec--CCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccc
Q psy17371         68 DQIPSN-MVAQVKISYLEIYNEFVYDLLSSE---RKALKVRES--PDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATA  141 (237)
Q Consensus        68 ~~~~~~-~~~~v~vS~~EIy~e~v~DLL~~~---~~~~~i~~~--~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~  141 (237)
                      +.++.. ..++|++||+|||+|+|+|||++.   .+++.++++  ..++++++|++++.|.|++|+.++|..|.++|...
T Consensus       129 ~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~~l~i~e~~~~~~g~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~  208 (352)
T cd01364         129 EKLESQNTEYSVKVSYLELYNEELFDLLSSESDLNKPLRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRKTA  208 (352)
T ss_pred             HHHHhccceeEEEEEEEEeeCCeeeeCCCCccccCccceEEeccCcCCCEEeCCcEEEEeCCHHHHHHHHHHHhhhcccc
Confidence            988664 689999999999999999999986   678999999  58999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCceEEEEEEEEEEecC-CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhc
Q psy17371        142 STNMNDKSSRSHSIFQIQLTLTEDT-GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD  220 (237)
Q Consensus       142 ~~~~n~~ssrsH~v~~i~v~~~~~~-~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~  220 (237)
                      ++.+|..|||||+||+|.+.+.... .+......|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|+.
T Consensus       209 ~t~~n~~sSRSH~i~~i~i~~~~~~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~  288 (352)
T cd01364         209 ATLMNDQSSRSHSIFSITIHIKETTISGEELVKIGKLNLVDLAGSENIGRSGAENKRAREAGNINQSLLTLGRVINALVE  288 (352)
T ss_pred             cCcCCCCCCCCceEEEEEEEEeccCCCCCccEEEEEEEEEECCCccccccccCcchhhHHHhhhhHHHHHHHHHHHHHHc
Confidence            9999999999999999999987632 233335689999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhhhhcC
Q psy17371        221 HSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       221 ~~~~vpyrdSkLT~lLq  237 (237)
                      +++|||||+||||+|||
T Consensus       289 ~~~~vpyR~S~LT~lL~  305 (352)
T cd01364         289 KSPHIPYRESKLTRLLQ  305 (352)
T ss_pred             CCCCCCCcccHHHHHHH
Confidence            99999999999999996

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil d

>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

Probab=100.00  E-value=1e-51  Score=356.94  Aligned_cols=222  Identities=38%  Similarity=0.534  Sum_probs=196.5

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhh-----------cCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEK-----------IGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~-----------~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      ..||++|......  +|+. ..|+++.           ||++||||||||+|..      +++||+||++++||+.+++.
T Consensus        47 f~fD~vf~~~~~q~~v~~~-v~p~v~~~~~G~~~~i~ayG~tgSGKT~tl~G~~------~~~Gli~r~~~~lf~~~~~~  119 (329)
T cd01366          47 FSFDRVFDPDASQEDVFEE-VSPLVQSALDGYNVCIFAYGQTGSGKTYTMEGPP------ENPGIIPRALEQLFNTAEEL  119 (329)
T ss_pred             EecCEEECCCCCHHHHHHH-HHHHHHHHhCCCceEEEEeCCCCCCCcEEecCCC------CCCCcHHHHHHHHHHHHHhh
Confidence            4556666544433  6654 3554444           3888888888888887      88999999999999887543


Q ss_pred             ----ceEEEEEEEEEEeccccccccccc---cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         74 ----MVAQVKISYLEIYNEFVYDLLSSE---RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        74 ----~~~~v~vS~~EIy~e~v~DLL~~~---~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                          ..+.|++||+|||+|+++|||++.   .+.+.+++++.++++++|++++.|.|++|+.+++..|.++|....+..|
T Consensus       120 ~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~~l~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n  199 (329)
T cd01366         120 KEKGWSYTITASMLEIYNETIRDLLATKPAPKKKLEIKHDSKGETYVTNLTEVPVSSPEEVTRLLNLGSKNRSVASTNMN  199 (329)
T ss_pred             hccCceEEEEEEEEEEECCEeEECCCCCcCCCCceEEEECCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhccccccccc
Confidence                689999999999999999999986   7889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCC
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP  226 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vp  226 (237)
                      ..|||||+||+++|.+.+....  ....|+|+||||||+|+..+.+..+.+++|+..||+||.+|++||.+|+.+.+|||
T Consensus       200 ~~sSRsH~i~~i~v~~~~~~~~--~~~~s~l~~VDLaGsE~~~~~~~~~~~~~e~~~in~Sl~~L~~vl~~l~~~~~~ip  277 (329)
T cd01366         200 EHSSRSHAVFQLKIRGTNLQTG--EQTRGKLNLVDLAGSERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVP  277 (329)
T ss_pred             CCCCCccEEEEEEEEEEcCCCC--cEEEEEEEEEECCCCcccccccccchhhHhHhhhhhHHHHHHHHHHHHhcCCCcCC
Confidence            9999999999999998875432  25789999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhhhcC
Q psy17371        227 YRNSTLTYLLK  237 (237)
Q Consensus       227 yrdSkLT~lLq  237 (237)
                      |||||||+|||
T Consensus       278 yr~S~LT~lL~  288 (329)
T cd01366         278 YRNSKLTYLLQ  288 (329)
T ss_pred             CcccHhHHHHH
Confidence            99999999996

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for mi

>KOG0239|consensus

Probab=100.00  E-value=4e-53  Score=388.14  Aligned_cols=224  Identities=38%  Similarity=0.501  Sum_probs=203.8

Q ss_pred             CcccchhhhhhhhH-HHHHHhhh-hhhhcCcceeeeEeeeecC-CCCCCCCCCccccchhHHHhhccCCCC---ceEEEE
Q psy17371          6 NPLQSHIEESLATL-RYALQARN-IFEKIGTNEFVFHFSMMGD-NLDSSLKETTGIIPRFCHQLFDQIPSN---MVAQVK   79 (237)
Q Consensus         6 ~~~~~~~~~~~~~~-~y~~~~~~-i~~~~G~~~sgktyt~~G~-~~~~~~~~~~Gii~r~~~~Lf~~~~~~---~~~~v~   79 (237)
                      .++|++||+.+.++ .+...+.+ ++-+||++||||||||.|+ .      +++|||||++++||+.+.+.   |.|.+.
T Consensus       371 ~~sQ~~VF~e~~~lv~S~lDGYnVCIFAYGQTGSGKTyTM~G~~~------~~~Giipral~~lF~~~~~~~~g~~y~~~  444 (670)
T KOG0239|consen  371 LASQDDVFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMSGPTP------EDPGIIPRALEKLFRTITSLKSGWKYDKT  444 (670)
T ss_pred             cccHHHHHHHHHHHHHHHhcCcceeEEEecccCCCccccccCCCc------ccCCccHHHHHHHHHHHHhhccCceEEee
Confidence            56788888888877 67777777 3455899999999999995 4      78999999999999877554   899999


Q ss_pred             EEEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceEEEE
Q psy17371         80 ISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ  157 (237)
Q Consensus        80 vS~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~v~~  157 (237)
                      ++|+|||||+|+|||.+.  ...+.|++++++.+.|.+++.+.|.+.+++..+++.|..+|..++|.+|.+|||||+||+
T Consensus       445 ~s~~EIYNe~i~DlL~~~~~~~k~~I~~~~~~~~~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~  524 (670)
T KOG0239|consen  445 VSMLEIYNEAIRDLLSDESYVGKLEIVDDAEGNLMVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFR  524 (670)
T ss_pred             eehhHHHHHHHHHhccccccccceeEEEcCCCceecccceEEecCCHHHHHHHHHHhhccccccccccchhhhccceEEE
Confidence            999999999999999986  578999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCCchhhhhcC
Q psy17371        158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       158 i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrdSkLT~lLq  237 (237)
                      |+|...+...+.  ...+.|+|||||||||+.+++..|.+++|.+.||+||++|++||.||+..+.||||||||||+|||
T Consensus       525 v~v~g~~~~t~~--~~~g~l~LVDLAGSER~~~s~~tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPyRNSKLT~lLq  602 (670)
T KOG0239|consen  525 VRIRGINELTGI--RVTGVLNLVDLAGSERVSKSGVTGERLKEAQNINKSLSALGDVISALASKRSHIPYRNSKLTQLLQ  602 (670)
T ss_pred             EEEeccccCccc--ccccceeEeecccCcccCcCCCchhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcccccchHHHhH
Confidence            999988633332  468889999999999999999999999999999999999999999999999999999999999997

>cd00106 KISc Kinesin motor domain

Probab=100.00  E-value=7.6e-51  Score=351.57  Aligned_cols=226  Identities=43%  Similarity=0.610  Sum_probs=205.0

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|......  +|+..++|+++.+           |++||||||||+|+.      +++|||||++++||+.+++
T Consensus        46 ~f~fd~vf~~~~~q~~v~~~~~~~~v~~~~~G~~~~i~~yG~tgSGKT~tl~G~~------~~~Gli~~~~~~Lf~~~~~  119 (328)
T cd00106          46 SFTFDHVFDPNSTQEDVYETTAKPLVESVLEGYNGTIFAYGQTGSGKTYTMFGSP------KDPGIIPRALEDLFNLIDE  119 (328)
T ss_pred             EEECCeEEcCCCCHHHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCeEEecCCC------CCCchHHHHHHHHHHHHhh
Confidence            34677777654433  8888887766554           899999999999988      8899999999999998876


Q ss_pred             C----ceEEEEEEEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         73 N----MVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        73 ~----~~~~v~vS~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                      .    ..+.|++||+|||+|+|+|||++.  ...+.+++++.+++.++|++++.|.|++|+.+++..|.++|...++..|
T Consensus       120 ~~~~~~~~~v~~S~~Ei~~e~v~DLL~~~~~~~~l~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n  199 (328)
T cd00106         120 RKEKNKSFSVSVSYLEIYNEKVYDLLSPEPPSKPLSLREDPKGGVYVKGLTEVEVGSAEDALSLLQKGLKNRTTASTAMN  199 (328)
T ss_pred             ccccCceEEEEEEEEEEECCEeEECCCCCCCCCCcEEEEcCCCCEEEeCCEEEEeCCHHHHHHHHHHHHhhcCcccCcCC
Confidence            5    569999999999999999999998  8999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC--CC
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS--AV  224 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~--~~  224 (237)
                      ..|+|||+||+++|.+............|+|+||||||+|+....+..+.+.+|+..||+||.+|++||.+|+.++  .|
T Consensus       200 ~~ssRSH~i~~i~v~~~~~~~~~~~~~~s~l~~VDLaGse~~~~~~~~~~~~~e~~~in~sl~~L~~vl~~l~~~~~~~~  279 (328)
T cd00106         200 ERSSRSHAIFTIHVEQRNTTNDGRSIKSSKLNLVDLAGSERAKKTGAEGDRLKEAKNINKSLSALGNVISALSSGQKKKH  279 (328)
T ss_pred             CCcCcCcEEEEEEEEEEecCCCCccEEEEEEEEEECCCCCcccccCCchhhhHhHHhhhhhHHHHHHHHHHHHhcCCCCc
Confidence            9999999999999999986554434679999999999999999988999999999999999999999999999999  89


Q ss_pred             CCCCCchhhhhcC
Q psy17371        225 PPYRNSTLTYLLK  237 (237)
Q Consensus       225 vpyrdSkLT~lLq  237 (237)
                      ||||+||||+|||
T Consensus       280 ip~r~SkLT~lL~  292 (328)
T cd00106         280 IPYRDSKLTRLLQ  292 (328)
T ss_pred             CCCcCcHHHHHHH
Confidence            9999999999996

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coil

>smart00129 KISc Kinesin motor, catalytic domain

Probab=100.00  E-value=7.9e-51  Score=352.30  Aligned_cols=226  Identities=42%  Similarity=0.588  Sum_probs=204.7

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...||++|......  +|+..+.|+++.+           |++||||||||+|+.      +++||+||++++||+.+.+
T Consensus        47 ~f~fD~vf~~~~~q~~v~~~~~~p~v~~~~~G~~~~i~~yG~tgSGKT~tl~G~~------~~~Gli~~~~~~Lf~~~~~  120 (335)
T smart00129       47 KFTFDKVFGATASQEDVFEETAAPLVDSVLEGYNATIFAYGQTGSGKTYTMSGTP------DSPGIIPRALKDLFEKIDK  120 (335)
T ss_pred             EEecCEEECCCCChHHHHHHHHHHHHHHHhcCCceeEEEeCCCCCCCceEecCCC------CCCCHHHHHHHHHHHHhhh
Confidence            35678888665544  8888888876644           899999999999987      7899999999999998866


Q ss_pred             C---ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         73 N---MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        73 ~---~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                      .   ..+.|++||+|||+|+++|||++.++.+.+++++.++++++|++++.|.|++|+.+++..+.++|...++.+|..|
T Consensus       121 ~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~l~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~s  200 (335)
T smart00129      121 LEEGWQFQVKVSYLEIYNEKIRDLLNPSPKKLEIREDKKGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEES  200 (335)
T ss_pred             cccCceEEEEEEEEEEECCEEEECcCCCCCCcEEEECCCCCEEecCCEEEEeCCHHHHHHHHHHHHhccccccCCCCCCC
Confidence            4   5899999999999999999999989999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcC--CCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDH--SAVPPY  227 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~--~~~vpy  227 (237)
                      +|||+||+|++.+............|+|+||||||+|+....+..+.+++|+..||+||.+|++||.+|+++  +.|+||
T Consensus       201 sRsH~i~~l~v~~~~~~~~~~~~~~s~l~~VDLaGse~~~~~~~~~~~~~e~~~in~sl~~L~~~l~~l~~~~~~~~ip~  280 (335)
T smart00129      201 SRSHAVFTITVESKIKNSSSGSGKASKLNLVDLAGSERASKTGAEGDRLKEAGNINKSLSALGNVINALADGQKSRHIPY  280 (335)
T ss_pred             CcceEEEEEEEEEEecCCCCCCEEEEEEEEEECCCCCccccccChhHHHHhhchhhhHHHHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999885444445578999999999999999999999999999999999999999999999994  569999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      |+|+||+|||
T Consensus       281 r~S~LT~lL~  290 (335)
T smart00129      281 RDSKLTRLLQ  290 (335)
T ss_pred             cCcHhHHHHH
Confidence            9999999996

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.

>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport

Probab=100.00  E-value=6.8e-52  Score=359.04  Aligned_cols=225  Identities=41%  Similarity=0.582  Sum_probs=200.5

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecC--CCCCCCCCCccccchhHHHhhccCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGD--NLDSSLKETTGIIPRFCHQLFDQIP   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~--~~~~~~~~~~Gii~r~~~~Lf~~~~   71 (237)
                      ..||+||.....+  +|+..++|+++.+           |++||||||||+|+  .      .++||+||++++||+.++
T Consensus        43 f~FD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayG~tgSGKT~Tm~G~~~~------~~~Gli~~~~~~lf~~~~  116 (335)
T PF00225_consen   43 FRFDRVFDEDATQEDVYEEVVSPLVDSVLDGYNATIFAYGQTGSGKTYTMFGSNDP------SEPGLIPRALRDLFSQIE  116 (335)
T ss_dssp             EEESEEEETTSTHHHHHHHHTHHHHHHHHTT-EEEEEEEESTTSSHHHHHTBSTST------TTBSHHHHHHHHHHHHHH
T ss_pred             EEcCeEECCCCCHHHHHHHHHHHHHHHhhcCCceEEEeeccccccccccccccccc------cccchhhhHHHHHhhhhc
Confidence            4678888766544  8888888876665           88888888888887  4      789999999999999886


Q ss_pred             CC-----ceEEEEEEEEEEeccccccccccc----cccceeeecCCCC-eeecCcEEEEecCHHHHHHHHHHHHhhCccc
Q psy17371         72 SN-----MVAQVKISYLEIYNEFVYDLLSSE----RKALKVRESPDTG-IFVSDLSVHGVSSFSEMQKWLSEGNKARATA  141 (237)
Q Consensus        72 ~~-----~~~~v~vS~~EIy~e~v~DLL~~~----~~~~~i~~~~~~~-~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~  141 (237)
                      ..     ..+.|+|||+|||+|+|+|||++.    ...+.+++++..+ +.++|++++.|.+++|+.++|..|.++|...
T Consensus       117 ~~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~l~i~~~~~~g~~~i~~l~~~~v~s~~~~~~~l~~~~~~R~~~  196 (335)
T PF00225_consen  117 ERKEKSGYEFSVSVSYLEIYNEKVYDLLSPNNSKSRKPLKIREDSNKGSVYIKGLTEVEVKSAEEALQLLKKGQKNRRTA  196 (335)
T ss_dssp             HHTTTSTEEEEEEEEEEEEETTEEEETTSTTSSSTTSEBEEEEETTTEEEEETTSEEEEESSHHHHHHHHHHHHHHHTCT
T ss_pred             cccccccccccccccchhhhhhhhhhhcCccccccccccceeeccccccceeeccccccccccccccccccchhhccccc
Confidence            53     579999999999999999999987    3679999999876 9999999999999999999999999999999


Q ss_pred             cCCCCCCCCCceEEEEEEEEEEecCCCce--eeeeeEEEEEEcCCCCCcCCcCc-hhHHHHHHHHHhHHHHHHHHHHHHh
Q psy17371        142 STNMNDKSSRSHSIFQIQLTLTEDTGSSV--TQKCSQINLVDLAGSERVAQTKA-TEERFKEGRNINLSLMTLGQVITNL  218 (237)
Q Consensus       142 ~~~~n~~ssrsH~v~~i~v~~~~~~~~~~--~~~~s~l~~vDLagse~~~~~~~-~~~~~~e~~~in~sl~~L~~vi~aL  218 (237)
                      .+.+|..|||||+||+++|.+........  ....|+|+||||||+|+..+... .+.+.+|+..||+||.+|++||.+|
T Consensus       197 ~t~~n~~sSRSH~i~~i~v~~~~~~~~~~~~~~~~s~l~~vDLaGsE~~~~~~~~~~~~~~e~~~in~Sl~~L~~vi~~L  276 (335)
T PF00225_consen  197 STKMNARSSRSHAIFTIHVEQKDRDPSDDEESVKHSRLTFVDLAGSERLKKSGASDGQRLKESSNINKSLSALGNVIRAL  276 (335)
T ss_dssp             SSSCTHHGGGSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEEEEESTGGCGCSSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccceeecceeeeecccccccccccccccccccccceecchhhhhhhhHhhh
Confidence            99999999999999999999998544432  35789999999999999988876 4788999999999999999999999


Q ss_pred             hcC--CCCCCCCCchhhhhcC
Q psy17371        219 SDH--SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       219 ~~~--~~~vpyrdSkLT~lLq  237 (237)
                      +.+  ..|+||||||||+|||
T Consensus       277 ~~~~~~~~vpyr~SkLT~lL~  297 (335)
T PF00225_consen  277 AQGSKQSHVPYRDSKLTRLLK  297 (335)
T ss_dssp             HCTTSTSSSCGGGSHHHHHTG
T ss_pred             hccccchhhhhhcccccceec
Confidence            999  7899999999999997

The kinesin motor activity is directed toward the microtubule's plus end. Kinesin is an oligomeric complex composed of two heavy chains and two light chains. The maintenance of the quaternary structure does not require interchain disulphide bonds. The heavy chain is composed of three structural domains: a large globular N-terminal domain which is responsible for the motor activity of kinesin (it is known to hydrolyse ATP, to bind and move on microtubules), a central alpha-helical coiled coil domain that mediates the heavy chain dimerisation; and a small globular C-terminal domain which interacts with other proteins (such as the kinesin light chains), vesicles and membranous organelles. A number of proteins have been recently found that contain a domain similar to that of the kinesin 'motor' domain [, ]: Drosophila melanogaster claret segregational protein (ncd). Ncd is required for normal chromosomal segregation in meiosis, in females, and in early mitotic divisions of the embryo. The ncd motor activity is directed toward the microtubule's minus end. Homo sapiens CENP-E []. CENP-E is a protein that associates with kinetochores during chromosome congression, relocates to the spindle midzone at anaphase, and is quantitatively discarded at the end of the cell division. CENP-E is probably an important motor molecule in chromosome movement and/or spindle elongation. H. sapiens mitotic kinesin-like protein-1 (MKLP-1), a motor protein whose activity is directed toward the microtubule's plus end. Saccharomyces cerevisiae KAR3 protein, which is essential for nuclear fusion during mating. KAR3 may mediate microtubule sliding during nuclear fusion and possibly mitosis. S. cerevisiae CIN8 and KIP1 proteins which are required for the assembly of the mitotic spindle. Both proteins seem to interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Emericella nidulans (Aspergillus nidulans) bimC, which plays an important role in nuclear division. A. nidulans klpA. Caenorhabditis elegans unc-104, which may be required for the transport of substances needed for neuronal cell differentiation. C. elegans osm-3. Xenopus laevis Eg5, which may be involved in mitosis. Arabidopsis thaliana KatA, KatB and katC. Chlamydomonas reinhardtii FLA10/KHP1 and KLP1. Both proteins seem to play a role in the rotation or twisting of the microtubules of the flagella. C. elegans hypothetical protein T09A5.2. The kinesin motor domain is located in the N-terminal part of most of the above proteins, with the exception of KAR3, klpA, and ncd where it is located in the C-terminal section. The kinesin motor domain contains about 330 amino acids. An ATP-binding motif of type A is found near position 80 to 90, the C-terminal half of the domain is involved in microtubule-binding.; GO: 0003777 microtubule motor activity, 0005524 ATP binding, 0007018 microtubule-based movement; PDB: 3NWN_A 2Y5W_A 2Y65_C 3BFN_A 2WBE_C 2ZFL_A 2ZFI_A 1I6I_A 2ZFM_A 1IA0_K ....

>KOG0247|consensus

Probab=100.00  E-value=1.1e-51  Score=368.40  Aligned_cols=226  Identities=35%  Similarity=0.526  Sum_probs=200.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ...|.+||...-.+  +|+.++.|+|...           |.+||||||||+|+.      .++||+||++.-||..+.+
T Consensus        82 ~fsFt~VF~p~~tQ~dvF~~~~~plV~dlLkgqn~LlFTyGVTgSGKTYTm~G~~------~~~GIlPR~Ld~iF~siq~  155 (809)
T KOG0247|consen   82 KFSFTKVFGPSVTQADVFDTTVAPLVKDLLKGQNSLLFTYGVTGSGKTYTMTGTP------DRPGILPRALDVIFNSIQG  155 (809)
T ss_pred             EeeeeeecCCCccHHHHHHHHhHHHHHHHHcccceeEEEeeccCCCceEEeecCC------CCCCchHHHHHHHHHHhhc
Confidence            35678888555544  8888888877665           888999999999998      8899999999999987755


Q ss_pred             C-------------------------------------------------------------------ceEEEEEEEEEE
Q psy17371         73 N-------------------------------------------------------------------MVAQVKISYLEI   85 (237)
Q Consensus        73 ~-------------------------------------------------------------------~~~~v~vS~~EI   85 (237)
                      .                                                                   ..|.|+|||+||
T Consensus       156 ~~~~k~~~kp~~s~~~e~~~~~~alL~lkr~~~~nd~~~ts~~~~~~~~e~~e~~~~~e~~~~~l~~d~~ysV~VSf~EI  235 (809)
T KOG0247|consen  156 RQAKKPVFKPLRSNLFEIKAEEDALLQLKREAMLNDRKSTSKAHRQSTPEYAEHIHVIEQPALELDEDIVYSVFVSFVEI  235 (809)
T ss_pred             eeccCceeccccchHHHHHHHHHHHHhhhhhhccccccCcchhhccccHHHHhhcchhcccccccCcCcEEEEEeeHHHH
Confidence            2                                                                   346799999999


Q ss_pred             eccccccccccc------cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceEEEEEE
Q psy17371         86 YNEFVYDLLSSE------RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQ  159 (237)
Q Consensus        86 y~e~v~DLL~~~------~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~v~~i~  159 (237)
                      |||-|||||.+.      .+...+++|.++.++|+|++++.|+|.+|++++|+.|.++|+.++|..|..|||||+||+|.
T Consensus       236 YN~~iYDLLe~~s~q~~~~~~~ll~~d~~~~~~Vkgl~~V~VssseEA~~l~~lGqk~r~~asT~lN~~SSRSHsVFtIk  315 (809)
T KOG0247|consen  236 YNNYIYDLLEDASFQGKLQKLKLLREDTNGNMYVKGLTEVEVSSSEEALELFQLGQKRRRVASTKLNANSSRSHSVFTIK  315 (809)
T ss_pred             HHHHHHHhhccccccchhhhhhhhhhccCCCeeeccccEEEeccHHHHHHHHHHHHhhhhhhheeccccccccceeEEEE
Confidence            999999999865      22367788999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-----CCCCCCCchhhh
Q psy17371        160 LTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-----AVPPYRNSTLTY  234 (237)
Q Consensus       160 v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-----~~vpyrdSkLT~  234 (237)
                      +.+............|.|.|||||||||...+++.|.+++|+.+||.||.+|++||.+|..++     ++|||||||||+
T Consensus       316 l~q~~~~~~s~~i~vSqlsLvDLAGSERt~rtq~sG~RLrEagNINtSLmTLg~Cie~LR~nqk~ks~~~VPyRdSKLTh  395 (809)
T KOG0247|consen  316 LVQAPRSQDSNQITVSQLSLVDLAGSERTNRTQNSGERLREAGNINTSLMTLRRCIDVLRENQKSKSQKIVPYRDSKLTH  395 (809)
T ss_pred             eeecccccccCceeEEeeeeeecccchhcccccchhHHHHhhccccHHHHHHHHHHHHHHHHhhhhccccCcchHHHHHH
Confidence            999875544445789999999999999999999999999999999999999999999998765     599999999999


Q ss_pred             hcC
Q psy17371        235 LLK  237 (237)
Q Consensus       235 lLq  237 (237)
                      ++|
T Consensus       396 lfq  398 (809)
T KOG0247|consen  396 LFK  398 (809)
T ss_pred             HHH
Confidence            875

>KOG0246|consensus

Probab=100.00  E-value=1.3e-48  Score=340.47  Aligned_cols=225  Identities=31%  Similarity=0.432  Sum_probs=197.2

Q ss_pred             cccchhhhhhh--hHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLA--TLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~--~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      -+||+.|....  -.||..+++|+|..+           ||+||||||||-|......-....||+.++.+|+|..+...
T Consensus       260 F~FDyaFDe~~sNe~VYrfTa~PlV~~IF~~G~ATCFAYGQTGSGKT~TMggdfsgk~q~~s~giya~aa~Dvf~~L~~p  339 (676)
T KOG0246|consen  260 FRFDYAFDESASNELVYRFTAKPLVKTIFEGGMATCFAYGQTGSGKTYTMGGDFSGKAQDCSKGIYALAARDVFRLLRQP  339 (676)
T ss_pred             EEEeeecccccchHHHHHHhhhHHHHHHHhCCceeeeeeccCCCCceeecccccCcccccccccchhhhhhHHHHHhccc
Confidence            47899996665  449999999977655           88888888888666533322356799999999999998763


Q ss_pred             ----ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         74 ----MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        74 ----~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                          ..+.|++||+|||+.+|||||++ ++.+.+.||.+..++|.||.+..|.+.+|++++|+.|+..|+.+.|..|..|
T Consensus       340 ~Y~~~~l~v~~tFFEIYgGKvfDLL~~-k~KLrvLEDg~QQVqVVGLqE~~v~~~eeVl~lIe~Gns~RtsG~TsANs~S  418 (676)
T KOG0246|consen  340 TYRKLDLKVYVTFFEIYGGKVYDLLND-KKKLRVLEDGNQQVQVVGLQEEEVSGVEEVLELIEKGNSCRTSGQTSANSNS  418 (676)
T ss_pred             chhhcceEEEEEEEEEeCcchhhhhcc-ccceEEeecCCceEEEeeceeeeccCHHHHHHHHHhcccccccCcccCcccc
Confidence                67899999999999999999998 7889999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcC-chhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK-ATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYR  228 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyr  228 (237)
                      ||||+||+|.+.....     ...++++.||||||+||...+. +..+...||..|||||.||..||+||..++.|+|||
T Consensus       419 SRSHAvfQIilr~~~~-----~k~hGKfSlIDLAGnERGaDts~adRqtRlEGAEINKSLLALKECIRaLg~nk~H~PFR  493 (676)
T KOG0246|consen  419 SRSHAVFQIILRKHGE-----FKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKSHLPFR  493 (676)
T ss_pred             cccceeEeeeeecCCc-----ceeEeEEEEEEccCCccCCcccccchhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCch
Confidence            9999999999875432     2568999999999999987765 455566699999999999999999999999999999


Q ss_pred             CchhhhhcC
Q psy17371        229 NSTLTYLLK  237 (237)
Q Consensus       229 dSkLT~lLq  237 (237)
                      .||||++||
T Consensus       494 ~SKLTqVLR  502 (676)
T KOG0246|consen  494 GSKLTQVLR  502 (676)
T ss_pred             hhhHHHHHH
Confidence            999999996

>KOG0241|consensus

Probab=100.00  E-value=1.2e-49  Score=360.90  Aligned_cols=224  Identities=45%  Similarity=0.640  Sum_probs=194.4

Q ss_pred             ccchhhhhhhhHHHH--HHhhh-hhhhcCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC----ceEEEEE
Q psy17371          8 LQSHIEESLATLRYA--LQARN-IFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN----MVAQVKI   80 (237)
Q Consensus         8 ~~~~~~~~~~~~~y~--~~~~~-i~~~~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~----~~~~v~v   80 (237)
                      .|+.||+|.++.+-+  ..+.+ ||-+|||+||||+|+|+|..      +++|||||.+..||+++...    ..|+|.|
T Consensus        73 gQE~Vf~~lG~~il~naf~GyNaCifaYGQtGsGKsYsmmGt~------~QpGiIPrlc~~lFe~I~k~~n~~~tfkVeV  146 (1714)
T KOG0241|consen   73 GQETVFKCLGEGILENAFQGYNACIFAYGQTGSGKSYSMMGTA------EQPGIIPRLCESLFERIDKESNPSQTFKVEV  146 (1714)
T ss_pred             cchhHHHhcchHHHHHHhhccceeeEEecccCCCceeEeeccC------CCCCchhHHHHHHHHHHHhccCCCceEEEEE
Confidence            455666666544222  12222 33445888888888888877      99999999999999998644    7899999


Q ss_pred             EEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceEEEEE
Q psy17371         81 SYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQI  158 (237)
Q Consensus        81 S~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~v~~i  158 (237)
                      ||+|||||+++|||.|+  +..+++++++-.|.++.||++..|.|++|+-.++..|++.|+...+.+|..|+|||+||.+
T Consensus       147 SymEIynEkv~DLLdPk~ssqtlkVrehsvlGp~vdGLS~laV~S~qdId~lm~egnKsrtvaatnmn~EssrsHaVFsl  226 (1714)
T KOG0241|consen  147 SYMEIYNEKVRDLLDPKGSSQTLKVREHSVLGPYVDGLSQLAVTSFQDIDSLMSEGNKSRTVAATNMNEESSRSHAVFSL  226 (1714)
T ss_pred             EHHHHhhcchhhhhCCCCCcceeEEeecccccccccchhhhhcccHHHHHHHHHhccccceeeeecccccccccceeEEE
Confidence            99999999999999987  6779999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEe--cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCCCCCCc
Q psy17371        159 QLTLTE--DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS------AVPPYRNS  230 (237)
Q Consensus       159 ~v~~~~--~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~------~~vpyrdS  230 (237)
                      .|++.-  ...+....+.|+|.+|||||+||+.+++..|.+++|+.+||+||++|+.||.||++++      ++||||||
T Consensus       227 vvtQ~l~D~ktg~SgeKvsklslVDLAgserasktga~g~rlkegsNinkSLttLglVIsaLadq~n~kgkdKfvPYrDS  306 (1714)
T KOG0241|consen  227 VVTQTLYDLKTGHSGEKVSKLSLVDLAGSERASKTGAAGSRLKEGSNINKSLTTLGLVISALADQKNGKGKDKFVPYRDS  306 (1714)
T ss_pred             EEeeEEeccccCcchhheeeeeEEEeccccccccccchhhhhhhcCCcchhhHHHHHHHHHHHHhhcCCCccccccchhH
Confidence            999864  4444444789999999999999999999999999999999999999999999998754      59999999


Q ss_pred             hhhhhcC
Q psy17371        231 TLTYLLK  237 (237)
Q Consensus       231 kLT~lLq  237 (237)
                      .||+|||
T Consensus       307 VLTwLLk  313 (1714)
T KOG0241|consen  307 VLTWLLK  313 (1714)
T ss_pred             HHHHHHH
Confidence            9999997

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=6.8e-43  Score=318.66  Aligned_cols=231  Identities=42%  Similarity=0.577  Sum_probs=205.1

Q ss_pred             cCcccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC---CCCccccchhHHHhhccCCCC---c
Q psy17371          5 INPLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQLFDQIPSN---M   74 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~---~~~~Gii~r~~~~Lf~~~~~~---~   74 (237)
                      ..++||.||...+.+  +|+..++++++.+  |+|+|.++|+++|+||++++   .+++||||+++.+||+.++..   .
T Consensus        56 ~~~~fdkvf~~~~~q~~v~e~~~~~l~~~~l~g~N~TvfayGqTgsgKtyt~~G~~~~~Gii~~~l~~lf~~l~~~~~~~  135 (568)
T COG5059          56 GTYAFDKVFGPSATQEDVYEETIKPLIDSLLLGYNCTVFAYGQTGSGKTYTMSGTEEEPGIIPLSLKELFSKLEDLSMTK  135 (568)
T ss_pred             eEEEEeeccCCCCcHHHHHHHhhhhHHHHHHhcccceEEEEcccCCCceeEeecCccccchHHHHHHHHHHHHHhcccCc
Confidence            457899999776655  9999999988877  66666666666666666655   368999999999999988655   5


Q ss_pred             eEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceE
Q psy17371         75 VAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS  154 (237)
Q Consensus        75 ~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~  154 (237)
                      .+.|.+||+|||+|+++|||.+....+.++++...++.+.++++..+.+.+|++.+|.++..+|+...+.+|..|+|+|+
T Consensus       136 ~~~v~is~lEiYnEk~~DLl~~~~~~~~~~~~~~~~v~v~~l~~~~~~s~ee~l~~l~~~~~nr~~~~te~n~~ssRshs  215 (568)
T COG5059         136 DFAVSISYLEIYNEKIYDLLSPNEESLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTASTEINDESSRSHS  215 (568)
T ss_pred             ceeeEeehhHHHhhHHHhhccCccccccccccCCCceEeecceEEecCChHHHHHHHHHhhhhcccccchhccccccceE
Confidence            79999999999999999999987666889999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhc--CCCCCCCCCchh
Q psy17371        155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD--HSAVPPYRNSTL  232 (237)
Q Consensus       155 v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~--~~~~vpyrdSkL  232 (237)
                      +|++.+.+........  ..+++.+|||||+|+....+..+.+++|+..||+||.+|++||.+|..  +..|||||+|||
T Consensus       216 i~~i~~~~~~~~~~~~--~~~~l~lvDLagSE~~~~~~~~~~r~~E~~~iN~sLl~Lg~vI~~L~~~~~~~~ipyReskL  293 (568)
T COG5059         216 IFQIELASKNKVSGTS--ETSKLSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINALGDKKKSGHIPYRESKL  293 (568)
T ss_pred             EEEEEEEEeccCccce--ecceEEEEeeccccccchhhcccchhhhhhhhHhhHHHHHHHHHHHhccccCCccchhhhHH
Confidence            9999999988655553  337899999999999999989999999999999999999999999997  667999999999


Q ss_pred             hhhcC
Q psy17371        233 TYLLK  237 (237)
Q Consensus       233 T~lLq  237 (237)
                      ||+||
T Consensus       294 TRlLq  298 (568)
T COG5059         294 TRLLQ  298 (568)
T ss_pred             HHHHH
Confidence            99996

>KOG0244|consensus

Probab=100.00  E-value=1.3e-43  Score=324.77  Aligned_cols=229  Identities=38%  Similarity=0.550  Sum_probs=196.6

Q ss_pred             cCcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC
Q psy17371          5 INPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP   71 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~   71 (237)
                      -..++|++|....++  +|+..+.++++.+           |++|+||||||-+.....  ..+.|+|||+++.+|..+.
T Consensus        32 ~s~t~d~v~~~~~~Q~~~~e~~V~~l~~~lf~gynatvlaygQtgsgkTytmgt~~~~~--~~~~Gvipr~v~~~f~~i~  109 (913)
T KOG0244|consen   32 ASFTYDKVFLDLESQKEVYESCVRPLREKLFAGYNATVLAYGQTGSGKTYTMGTNDAPA--QDTVGVIPRAVSTLFTRIG  109 (913)
T ss_pred             cceeeeeeccCchHHHHHHHHHHHHHHHHHhhhhcceeeeecccCCCceeecccccccc--cccCCcCcchHHHHHHHHH
Confidence            356789999888766  9999999965544           777777777775553111  1236999999999999997


Q ss_pred             CC--ceEEEEEEEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         72 SN--MVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        72 ~~--~~~~v~vS~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                      +.  ..+.|.++|+|||+|.|+|||.|.  ...+.+++ +.+++.+.|+++..|.+..+..+.+..|...|+..++.+|.
T Consensus       110 ~~~~~~f~i~vs~vely~e~v~dl~~~~~~~~~i~~~e-~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~  188 (913)
T KOG0244|consen  110 KTESFVFRITVSFVELYNEEVLDLLKPSRLKANIKLRE-PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNA  188 (913)
T ss_pred             hhhccceeeeeeeeeccchhhhhhcChhhhhhceeccc-cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcch
Confidence            65  458999999999999999999965  44466777 78889999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA--VP  225 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~--~v  225 (237)
                      .|||||++|++.+.+........ ...++|+||||||+||.+++.+.|.+++|+.+||.+|++|++||.||.+.++  ||
T Consensus       189 qssRshAifti~lkq~kk~~~~s-~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk~~~v  267 (913)
T KOG0244|consen  189 QSSRSHAIFTITLKQRKKLSKRS-SFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKKGGEV  267 (913)
T ss_pred             hhhhhhHHHHHHHHHHHHhhccc-hhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhcCCcc
Confidence            99999999999999865222221 4579999999999999999999999999999999999999999999999887  99


Q ss_pred             CCCCchhhhhcC
Q psy17371        226 PYRNSTLTYLLK  237 (237)
Q Consensus       226 pyrdSkLT~lLq  237 (237)
                      ||||||||||||
T Consensus       268 pyRdSkltrlLQ  279 (913)
T KOG0244|consen  268 PYRDSKLTRLLQ  279 (913)
T ss_pred             cchHHHHHHHHH
Confidence            999999999997

>cd01363 Motor_domain Myosin and Kinesin motor domain

Probab=100.00  E-value=2.4e-38  Score=252.48  Aligned_cols=158  Identities=39%  Similarity=0.540  Sum_probs=136.7

Q ss_pred             hhhhhhhHHHHH--Hhhh-hhhhcCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCCceEEEEEEEEEEecc
Q psy17371         12 IEESLATLRYAL--QARN-IFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQVKISYLEIYNE   88 (237)
Q Consensus        12 ~~~~~~~~~y~~--~~~~-i~~~~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~~~~~v~vS~~EIy~e   88 (237)
                      +|+...+. +..  .+.+ ++-.||++||||||||+|+.      +++||+||++++                       
T Consensus         8 vf~~~~~~-v~~~~~G~n~~i~~yG~tGsGKT~Tm~G~~------~~~Giip~~~~~-----------------------   57 (186)
T cd01363           8 VFRDVGPL-LQSALDGYNVCIFAYGQTGSGKTYTMEGKR------EGAGIIPRTVTD-----------------------   57 (186)
T ss_pred             HHHHHHHH-HHHHhCCcceeEEEECCCCCcceEecCCCC------CCCCcchHHHHH-----------------------
Confidence            66666633 222  2222 34446999999999999998      889999999998                       


Q ss_pred             ccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCceEEEEEEEEEEecCC-
Q psy17371         89 FVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTG-  167 (237)
Q Consensus        89 ~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH~v~~i~v~~~~~~~-  167 (237)
                                                            ++++++.+.++|....+.+|..|||+|+||+|++.+..... 
T Consensus        58 --------------------------------------~~~ll~~g~~~R~~~~t~~N~~SSRsH~i~~i~v~~~~~~~~   99 (186)
T cd01363          58 --------------------------------------VIDLMDKGNANRTTAATAMNEHSSRSHSVFRIHFGGKNALAS   99 (186)
T ss_pred             --------------------------------------HHHHHhhccccccccccCCCCccCcccEEEEEEEEEeecCCC
Confidence                                                  88899999999999999999999999999999999887332 


Q ss_pred             CceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCCchhhhhcC
Q psy17371        168 SSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       168 ~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrdSkLT~lLq  237 (237)
                      .......|+|+||||||+|+....+..+.+++|++.||+||.+|++||.+|+++++||||||||||+|||
T Consensus       100 ~~~~~~~s~l~lVDLAGsE~~~~~~~~~~~~~e~~~in~sl~~L~~~i~~l~~~~~~vpyr~SkLT~lL~  169 (186)
T cd01363         100 ATEQPKVGKINLVDLAGSERIDFSGAEGSRLTETANINKSLSTLGNVISALAERDSHVPYRESKLTRLLQ  169 (186)
T ss_pred             CccceeeeeEEEEEccccccccccCCchhhHHHHHHHhhHHHHHHHHHHHHhcCCCCCCCcccHHHHHHH
Confidence            2334678999999999999999999999999999999999999999999999999999999999999996

These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.

>KOG4280|consensus

Probab=97.31  E-value=8.4e-05  Score=67.95  Aligned_cols=43  Identities=12%  Similarity=0.110  Sum_probs=32.6

Q ss_pred             cCcccchhhhhhhhHHHHH--Hhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATLRYAL--QARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~~y~~--~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -+++|+.||..+...+-+.  .|.+ .+-+|||+|+||||||.|+.
T Consensus        62 ~~stQ~dvy~~~~~~lV~svl~GyNgtvFaYGQTGsGKTyTM~G~~  107 (574)
T KOG4280|consen   62 SDSTQDDVYQETVAPLVESVLEGYNGTVFAYGQTGSGKTYTMIGPD  107 (574)
T ss_pred             CCCCHHHHHHHHhHHHHHHHhcccCceEEEeccCCCCCceEeeCCC
Confidence            4689999998887553333  3334 45559999999999999994

>KOG0242|consensus

Probab=97.07  E-value=0.0002  Score=67.48  Aligned_cols=44  Identities=18%  Similarity=0.117  Sum_probs=30.3

Q ss_pred             cCcccchhhhhhh-hH-HHHHHhhh-hhhhcCcceeeeEeeeecCCC
Q psy17371          5 INPLQSHIEESLA-TL-RYALQARN-IFEKIGTNEFVFHFSMMGDNL   48 (237)
Q Consensus         5 ~~~~~~~~~~~~~-~~-~y~~~~~~-i~~~~G~~~sgktyt~~G~~~   48 (237)
                      ..|+|..||+... ++ .-...|.+ .|=+||++||||||||.|...
T Consensus        63 ~~~t~~~VYe~~tkpiv~~~l~G~N~TVFAYG~TgSGKTyTM~G~~~  109 (675)
T KOG0242|consen   63 EESTQEDVYERTTKPLLLSVLEGFNATVFAYGQTGSGKTYTMSGSED  109 (675)
T ss_pred             CCCCHHHHHHhccHHHHHHHhcCcccceeeecCCCCCCceEEeccCC
Confidence            3567888887744 44 22223333 344599999999999999963

>KOG0240|consensus

Probab=96.43  E-value=0.0014  Score=59.30  Aligned_cols=49  Identities=18%  Similarity=0.018  Sum_probs=36.3

Q ss_pred             ccCcccchhhhhhhhHHHHHH--hhh-hhhhcCcceeeeEeeeecCCCCCCC
Q psy17371          4 TINPLQSHIEESLATLRYALQ--ARN-IFEKIGTNEFVFHFSMMGDNLDSSL   52 (237)
Q Consensus         4 ~~~~~~~~~~~~~~~~~y~~~--~~~-i~~~~G~~~sgktyt~~G~~~~~~~   52 (237)
                      +-+++|..||+..+..+-+..  |.. .+-+||++++||||||.|.+.+...
T Consensus        58 ~pnatQe~Vy~~~a~~Iv~dVL~GYNGTvfaYGqT~sGKTytm~G~~~d~~~  109 (607)
T KOG0240|consen   58 SPNATQEDVYEFAAKPIVDDVLLGYNGTVFAYGQTGSGKTYTMEGIGHDPEE  109 (607)
T ss_pred             CCCccHHHHHHHHHHHHHHHHhcccceeEEEecCCCCCcceeecccCCChhh
Confidence            457899999988886543332  222 4556999999999999999975433

>KOG0245|consensus

Probab=96.32  E-value=0.0013  Score=63.11  Aligned_cols=43  Identities=21%  Similarity=0.154  Sum_probs=33.2

Q ss_pred             cCcccchhhhhhhhH--HHHHHhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATL--RYALQARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~--~y~~~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -=++|..||+..+-.  .-+..|.+ ++=+|||+||||+|||+|-.
T Consensus        64 hfAsQ~qVYedlg~~mL~~AfEGYN~ClFAYGQTGSGKSYTMMG~~  109 (1221)
T KOG0245|consen   64 HFASQKQVYEDLGREMLDHAFEGYNVCLFAYGQTGSGKSYTMMGFQ  109 (1221)
T ss_pred             chhhHHHHHHHHhHHHHHHHhcccceEEEEeccCCCCcceeeeccC
Confidence            347899999998855  33445555 34459999999999999987

>KOG0239|consensus

Probab=95.49  E-value=0.011  Score=55.92  Aligned_cols=48  Identities=13%  Similarity=0.179  Sum_probs=37.5

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSLKET   55 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~~~~   55 (237)
                      ..||+||.-.+.+  ||... .+++.++  |+|-|+++|+++|+||++++...
T Consensus       362 f~fdkVf~p~~sQ~~VF~e~-~~lv~S~lDGYnVCIFAYGQTGSGKTyTM~G~  413 (670)
T KOG0239|consen  362 FKFDKVFGPLASQDDVFEEV-SPLVQSALDGYNVCIFAYGQTGSGKTYTMSGP  413 (670)
T ss_pred             ceeeeecCCcccHHHHHHHH-HHHHHHHhcCcceeEEEecccCCCccccccCC
Confidence            5689999888776  77753 4444433  99999999999999999988543

>KOG0241|consensus

Probab=94.15  E-value=0.027  Score=54.15  Aligned_cols=50  Identities=20%  Similarity=0.364  Sum_probs=38.7

Q ss_pred             HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccC
Q psy17371         20 RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQI   70 (237)
Q Consensus        20 ~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~   70 (237)
                      ||...+..|++..  |+|+|+++|++.|+||++++...+|= |=++-.|-+.+
T Consensus        77 Vf~~lG~~il~naf~GyNaCifaYGQtGsGKsYsmmGt~~Q-pGiIPrlc~~l  128 (1714)
T KOG0241|consen   77 VFKCLGEGILENAFQGYNACIFAYGQTGSGKSYSMMGTAEQ-PGIIPRLCESL  128 (1714)
T ss_pred             HHHhcchHHHHHHhhccceeeEEecccCCCceeEeeccCCC-CCchhHHHHHH
Confidence            8888888877666  99999999999999999988777765 44444444433

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]

Probab=91.09  E-value=0.053  Score=50.59  Aligned_cols=81  Identities=42%  Similarity=0.566  Sum_probs=66.4

Q ss_pred             HHHhhCccccCCCCCCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHH
Q psy17371        133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG  212 (237)
Q Consensus       133 ~~~~~R~~~~~~~n~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~  212 (237)
                      .+...+....+..|..++++|+.|..............    . +..+|||++|+. .+..-+..+++...+|++|..++
T Consensus       486 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~----~-~n~~~~~~~e~~-~s~~~~~~l~~~~~~~k~l~~~~  559 (568)
T COG5059         486 KASKLRSSASTKLNLRSSRSHSKFRDHLNGSNSSTKEL----S-LNQVDLAGSERK-VSQSVGELLRETQSLNKSLSSLG  559 (568)
T ss_pred             hhccchhhcccchhhhhcccchhhhhcccchhhhhHHH----H-hhhhhccccccc-hhhhhHHHHHhhHhhhhccccch
Confidence            56677778888899999999999977766554322221    1 789999999999 88899999999999999999999


Q ss_pred             HHHHHhh
Q psy17371        213 QVITNLS  219 (237)
Q Consensus       213 ~vi~aL~  219 (237)
                      .++.++.
T Consensus       560 d~~~~~~  566 (568)
T COG5059         560 DVIHALG  566 (568)
T ss_pred             hhhhhcc
Confidence            9998764

>KOG0244|consensus

Probab=88.20  E-value=0.29  Score=47.26  Aligned_cols=8  Identities=0%  Similarity=0.169  Sum_probs=3.6

Q ss_pred             eEEEEEEE
Q psy17371        153 HSIFQIQL  160 (237)
Q Consensus       153 H~v~~i~v  160 (237)
                      |+++.-.+
T Consensus       287 ~tlmiaCi  294 (913)
T KOG0244|consen  287 DTLMIACI  294 (913)
T ss_pred             ceeeeeec
Confidence            44444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	237
3gbj_A	354	Crystal Structure Of The Motor Domain Of Kinesin Ki		2e-41
1i5s_A	367	Crystal Structure Of The Kif1a Motor Domain Complex		6e-41
1ia0_K	394	Kif1a Head-Microtubule Complex Structure In Atp-For		7e-41
1i6i_A	366	Crystal Structure Of The Kif1a Motor Domain Complex		8e-41
1vfv_A	366	Crystal Structure Of The Kif1a Motor Domain Complex		3e-40
2owm_A	443	Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3		8e-39
1goj_A	355	Structure Of A Fast Kinesin: Implications For Atpas		2e-34
3b6u_A	372	Crystal Structure Of The Motor Domain Of Human Kine		3e-34
1t5c_A	349	Crystal Structure Of The Motor Domain Of Human Kine		6e-33
2vvg_A	350	Crystal Structure Of The G.Intestinalis Kinesin 2 G		7e-33
4aqv_C	373	Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma		3e-30
4a1z_A	368	Eg5-1 Length = 368		4e-30
1x88_A	359	Human Eg5 Motor Domain Bound To Mg-Adp And Monastro		5e-30
1ii6_A	368	Crystal Structure Of The Mitotic Kinesin Eg5 In Com		5e-30
3hqd_A	369	Human Kinesin Eg5 Motor Domain In Complex With Ampp		5e-30
4a28_A	368	Eg5-2 Length = 368		5e-30
1q0b_A	367	Crystal Structure Of The Motor Protein Ksp In Compl		5e-30
4ap0_A	370	The Mitotic Kinesin Eg5 In Complex With Mg-Adp And		5e-30
3zcw_A	348	Eg5 - New Allosteric Binding Site Length = 348		6e-30
3lre_A	355	Crystal Structure Analysis Of Human Kinesin-8 Motor		7e-30
3b6v_A	395	Crystal Structure Of The Motor Domain Of Human Kine		7e-28
1bg2_A	325	Human Ubiquitous Kinesin Motor Domain Length = 325		4e-27
1mkj_A	349	Human Kinesin Motor Domain With Docked Neck Linker		4e-27
4atx_C	340	Rigor Kinesin Motor Domain With An Ordered Neck-Lin		4e-27
2wbe_C	373	Kinesin-5-Tubulin Complex With Amppnp Length = 373		2e-26
3nwn_A	359	Crystal Structure Of The Human Kif9 Motor Domain In		2e-25
4h1g_A	715	Structure Of Candida Albicans Kar3 Motor Domain Fus		5e-25
2ncd_A	420	Ncd (Non-Claret Disjunctional) Dimer From D. Melano		9e-25
1cz7_A	406	The Crystal Structure Of A Minus-End Directed Micro		1e-24
3u06_A	412	Crystal Structure Of The Kinesin-14 Ncdg347d Length		1e-24
3l1c_A	383	Kinesin-14 Protein Ncd, T436s Mutant Length = 383		1e-24
2h58_A	330	Crystal Structure Of The Kifc3 Motor Domain In Comp		1e-24
2y5w_A	365	Crystal Structure Of Drosophila Melanogaster Kinesi		2e-24
4a14_A	344	Human Kif7, A Kinesin Involved In Hedgehog Signalli		2e-24
1n6m_A	409	Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY		5e-24
2xt3_A	344	Human Kif7, A Kinesin Involved In Hedgehog Signalli		5e-23
3t0q_A	349	Motor Domain Structure Of The Kar3-Like Kinesin Fro		1e-22
3bfn_A	388	Crystal Structure Of The Motor Domain Of Human Kine		1e-21
2rep_A	376	Crystal Structure Of The Motor Domain Of Human Kine		2e-21
4gkr_A	371	Structure Of The C-Terminal Motor Domain Of Kar3 Fr		1e-20
3h4s_A	386	Structure Of The Complex Of A Mitotic Kinesin With		4e-20
4etp_A	403	C-Terminal Motor And Motor Homology Domain Of Kar3v		8e-20
3kar_A	346	The Motor Domain Of Kinesin-Like Protein Kar3, A Sa		1e-19
1f9t_A	358	Crystal Structures Of Kinesin Mutants Reveal A Sign		1e-19
3pxn_A	344	Crystal Structure Of The Drosophila Kinesin Family		4e-19
3dc4_A	344	Crystal Structure Of The Drosophila Kinesin Family		4e-19
1f9u_A	347	Crystal Structures Of Mutants Reveal A Signalling P		5e-19
1f9w_A	347	Crystal Structures Of Mutants Reveal A Signalling P		5e-19
1f9v_A	347	Crystal Structures Of Mutants Reveal A Signalling P		8e-19
1sdm_A	369	Crystal Structure Of Kinesin-Like Calmodulin Bindin		1e-18
2kin_A	238	Kinesin (Monomeric) From Rattus Norvegicus Length =		3e-18
2heh_A	387	Crystal Structure Of The Kif2c Motor Domain (Casp T		4e-17
3edl_D	331	Kinesin13-Microtubule Ring Complex Length = 331		9e-17
1v8j_A	410	The Crystal Structure Of The Minimal Functional Dom		1e-16
2gry_A	420	Crystal Structure Of The Human Kif2 Motor Domain In		2e-15
1ry6_A	360	Crystal Structure Of Internal Kinesin Motor Domain		6e-14

>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354

Iteration: 1
 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 26  RNIFEKIGTNEFVFHFSMMGDNLDSSLKETT---GIIPRFCHQLFDQIPSN----MVAQV 78
           +N F+  G N  +F +   G     ++  T    G+IPR C  LF++           +V
Sbjct: 86  QNAFD--GYNACIFAYGQTGSGKSYTMMGTADQPGLIPRLCSGLFERTQKEENEEQSFKV 143
Query: 79  KISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
           ++SY+EIYNE V DLL  +  R+ LKVRE    G +V  LS   V+S+ +++  +SEGNK
Sbjct: 144 EVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNK 203
Query: 137 ARATASTNMNDKSSRSHSIFQIQLTLT-EDTGSSVT-QKCSQINLVDLAGSERVAQTKAT 194
           +R  A+TNMN++SSRSH++F+I LT T  D  S  + +K  +++LVDLAGSER  +T A 
Sbjct: 204 SRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAA 263
Query: 195 EERFKEGRNINLSLMTLGQVITNLSDHSAVP------PYRNSTLTYLLK 237
            +R KEG NIN SL TLG VI+ L+D SA        PYR+S LT+LLK
Sbjct: 264 GDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLK 312

>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367

Iteration: 1
 Score =  163 bits (413), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 141/242 (58%), Gaps = 30/242 (12%)
Query: 19  LRYALQARNI----FEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-- 72
           L++A +  N+    + + G  +    ++MMG       K+  GIIP+ C  LF +I    
Sbjct: 82  LQHAFEGYNVCIFAYGQTGAGK---SYTMMG----KQEKDQQGIIPQLCEDLFSRINDTT 134
Query: 73  --NMVAQVKISYLEIYNEFVYDLLSSERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQK 129
             NM   V++SY+EIY E V DLL+ + K  L+VRE P  G +V DLS   V+S++++Q 
Sbjct: 135 NDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQD 194
Query: 130 WLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSS--VTQKCSQINLVDLAGSER 187
            +  GNKAR  A+TNMN+ SSRSH++F I  T       +   T+K S+I+LVDLAGSER
Sbjct: 195 LMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSER 254
Query: 188 VAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP------------PYRNSTLTYL 235
              T A   R KEG NIN SL TLG+VI+ L++  + P            PYR+S LT+L
Sbjct: 255 ADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWL 314
Query: 236 LK 237
           L+
Sbjct: 315 LR 316

>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394

Iteration: 1
 Score =  163 bits (413), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 141/242 (58%), Gaps = 30/242 (12%)
Query: 19  LRYALQARNI----FEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-- 72
           L++A +  N+    + + G  +    ++MMG       K+  GIIP+ C  LF +I    
Sbjct: 98  LQHAFEGYNVCIFAYGQTGAGK---SYTMMG----KQEKDQQGIIPQLCEDLFSRINDTT 150
Query: 73  --NMVAQVKISYLEIYNEFVYDLLSSERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQK 129
             NM   V++SY+EIY E V DLL+ + K  L+VRE P  G +V DLS   V+S++++Q 
Sbjct: 151 NDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQD 210
Query: 130 WLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSS--VTQKCSQINLVDLAGSER 187
            +  GNKAR  A+TNMN+ SSRSH++F I  T       +   T+K S+I+LVDLAGSER
Sbjct: 211 LMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSER 270
Query: 188 VAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP------------PYRNSTLTYL 235
              T A   R KEG NIN SL TLG+VI+ L++  + P            PYR+S LT+L
Sbjct: 271 ADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWL 330
Query: 236 LK 237
           L+
Sbjct: 331 LR 332

>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366

Iteration: 1
 Score =  163 bits (412), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 130/216 (60%), Gaps = 23/216 (10%)
Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEIYNEFVYDLLSS 96
           ++MMG       K+  GIIP+ C  LF +I      NM   V++SY+EIY E V DLL+ 
Sbjct: 105 YTMMG----KQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNP 160
Query: 97  ERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSI 155
           + K  L+VRE P  G +V DLS   V+S++++Q  +  GNKAR  A+TNMN+ SSRSH++
Sbjct: 161 KNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAV 220
Query: 156 FQIQLTLTEDTGSS--VTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           F I  T       +   T+K S+I+LVDLAGSER   T A   R KEG NIN SL TLG+
Sbjct: 221 FNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK 280
Query: 214 VITNLSDHSAVP------------PYRNSTLTYLLK 237
           VI+ L++  + P            PYR+S LT+LL+
Sbjct: 281 VISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR 316

>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366

Iteration: 1
 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 140/242 (57%), Gaps = 30/242 (12%)
Query: 19  LRYALQARNI----FEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-- 72
           L++A +  N+    + + G  +    ++MMG       K+  GIIP+ C  LF +I    
Sbjct: 82  LQHAFEGYNVCIFAYGQTGAGK---SYTMMG----KQEKDQQGIIPQLCEDLFSRINDTT 134
Query: 73  --NMVAQVKISYLEIYNEFVYDLLSSERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQK 129
             NM   V++SY+EIY E V DLL+ + K  L+VRE P  G +V DLS   V+S++++Q 
Sbjct: 135 NDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQD 194
Query: 130 WLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSS--VTQKCSQINLVDLAGSER 187
            +  GNK R  A+TNMN+ SSRSH++F I  T       +   T+K S+I+LVDLAGSER
Sbjct: 195 LMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSER 254
Query: 188 VAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP------------PYRNSTLTYL 235
              T A   R KEG NIN SL TLG+VI+ L++  + P            PYR+S LT+L
Sbjct: 255 ADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWL 314
Query: 236 LK 237
           L+
Sbjct: 315 LR 316

>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/236 (41%), Positives = 129/236 (54%), Gaps = 49/236 (20%)
Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS------NMVAQVKISYLEIYNEFVYDLL 94
           ++MMG        +  G+IPR C  LF +I S      N+   VK+SY E+YNE V DLL
Sbjct: 152 YTMMG------TPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLL 205
Query: 95  SS-----ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           +          LKVRESP  G +V DL+   V    E+ +W+  G+ +R  AST MND S
Sbjct: 206 APVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTS 265
Query: 150 SRSHSIFQIQLTL------TEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
           SRSH++F I L        T+DT    T++ S+I LVDLAGSER   T+AT +R +EG N
Sbjct: 266 SRSHAVFTIMLKQIHHDLETDDT----TERSSRIRLVDLAGSERAKSTEATGQRLREGSN 321
Query: 204 INLSLMTLGQVITNLSDH----------------------SAVPPYRNSTLTYLLK 237
           IN SL TLG+VI  L+D                       ++V PYR+S LT+LLK
Sbjct: 322 INKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLK 377

>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 10/202 (4%)
Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++MMG ++D    +  G+IPR   Q+F  I    +N+   V++SY+EIY E + DLL+ +
Sbjct: 96  YTMMGTSIDDP--DGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQ 153
Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
              L V E  + G++V  L    VSS  E+ + +  G  ARA A+TNMN +SSRSHSIF 
Sbjct: 154 NDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFV 213
Query: 158 IQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVIT 216
           I +T    +TGS+   K  Q+ LVDLAGSE+V +T A+ +  +E + IN SL  LG VI 
Sbjct: 214 ITITQKNVETGSA---KSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVIN 270
Query: 217 NLSD-HSAVPPYRNSTLTYLLK 237
            L+D  S+  PYR+S LT +L+
Sbjct: 271 ALTDGKSSHVPYRDSKLTRILQ 292

>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372

Iteration: 1
 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 127/218 (58%), Gaps = 15/218 (6%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK------ETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLE 84
           G N  +F +   G     +++      E  G+IP     +F  I  +   Q  V+ SYLE
Sbjct: 100 GFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLE 159
Query: 85  IYNEFVYDLLSSER-KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           IY E + DLLS ++ K L+++E PDTG++V DLS     S  E++  ++ GN+ R+  +T
Sbjct: 160 IYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGAT 219
Query: 144 NMNDKSSRSHSIFQIQLTLTE---DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKE 200
           NMN+ SSRSH+IF I +  +E   D  + +  +  ++NLVDLAGSER A+T A  ER KE
Sbjct: 220 NMNEHSSRSHAIFVITIECSEVGLDGENHI--RVGKLNLVDLAGSERQAKTGAQGERLKE 277
Query: 201 GRNINLSLMTLGQVITNLSDHSAVP-PYRNSTLTYLLK 237
              INLSL  LG VI+ L D  +   PYR+S LT LL+
Sbjct: 278 ATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQ 315

>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349

Iteration: 1
 Score =  137 bits (344), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 15/206 (7%)
Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS--NMVAQVKISYLEIYNEFVYDLL--SS 96
           ++MMG       ++  G+IPR  H +F +I    +    +++SY+EIYNE + DLL  + 
Sbjct: 93  YTMMGS------EDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQ 146
Query: 97  ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIF 156
           + K L +RE  +  ++V+DL+   V +     KW+++G K+R    T MN +SSRSH+IF
Sbjct: 147 KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIF 206
Query: 157 QIQLTLTEDTGSSVTQ---KCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           ++ L   E    S  +   K S +NLVDLAGSER AQT A   R KEG NIN SL  LGQ
Sbjct: 207 RMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQ 266
Query: 214 VITNLSDH--SAVPPYRNSTLTYLLK 237
           VI  LSD        YR+S LT +L+
Sbjct: 267 VIKKLSDGQVGGFINYRDSKLTRILQ 292

>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350

Iteration: 1
 Score =  137 bits (344), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Query: 33  GTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQLFDQIPSNMVAQ---VKISYLEIY 86
           G N  +F +   G     ++   KE  G IP     LFD I S+   Q   V  SYLE+Y
Sbjct: 88  GFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELY 147
Query: 87  NEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN 146
           NE + DL+ +  K L ++E    GI+V  LS+H V++ +E+   + +G   R  A+T MN
Sbjct: 148 NEEIRDLIKNNTK-LPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMN 206
Query: 147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINL 206
           D SSRSHSIF +++  +E   +    +  ++NLVDLAGSER ++T AT E   EG  INL
Sbjct: 207 DTSSRSHSIFMVRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINL 266
Query: 207 SLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           SL  LG VI+ L + +   PYR+S LT LL+
Sbjct: 267 SLSALGLVISKLVEGATHIPYRDSKLTRLLQ 297

>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373

Iteration: 1
 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 134 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 191
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 192 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 251
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 252 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 310
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 311 YRESKLTRILQ 321

>pdb|4A1Z|A Chain A, Eg5-1 Length = 368

Iteration: 1
 Score =  127 bits (320), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 18/212 (8%)
Query: 41  FSMMGD---NLDSSLKET--TGIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLL 94
           F+M G+   N + + +E    GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL
Sbjct: 113 FTMEGERSPNEEYTWEEVPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLL 172
Query: 95  S-----SERKALKVRESP--DTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND 147
           +     SER  L++ + P    G+ +  L    V +  E+ + L +G   R TA+T MN 
Sbjct: 173 NPSSDVSER--LQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNA 230
Query: 148 KSSRSHSIFQIQLTLTEDT--GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNIN 205
            SSRSHS+F + + + E T  G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN
Sbjct: 231 YSSRSHSVFSVTIHMKETTIDGEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNIN 289
Query: 206 LSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
            SL+TLG+VIT L + +   PYR S LT +L+
Sbjct: 290 QSLLTLGRVITALVERTPHVPYRESKLTRILQ 321

>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359

Iteration: 1
 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 125 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 182
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 183 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 242
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 243 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 301
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 302 YRESKLTRILQ 312

>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368

Iteration: 1
 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 134 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 191
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 192 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 251
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 252 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 310
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 311 YRESKLTRILQ 321

>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369

Iteration: 1
 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 134 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 191
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 192 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 251
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 252 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 310
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 311 YRESKLTRILQ 321

>pdb|4A28|A Chain A, Eg5-2 Length = 368

Iteration: 1
 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 134 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 191
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 192 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 251
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 252 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 310
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 311 YRESKLTRILQ 321

>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367

Iteration: 1
 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 133 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 190
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 191 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 250
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 251 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 309
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 310 YRESKLTRILQ 320

>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370

Iteration: 1
 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 136 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 193
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 194 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 253
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 254 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 312
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 313 YRESKLTRILQ 323

>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348

Iteration: 1
 Score =  127 bits (319), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLS-----SERKALKVRESP--D 108
           GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL+     SER  L++ + P   
Sbjct: 119 GIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER--LQMFDDPRNK 176
Query: 109 TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT-- 166
            G+ +  L    V +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E T  
Sbjct: 177 RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID 236
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           G  +  K  ++NLVDLAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   P
Sbjct: 237 GEELV-KIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVP 295
Query: 227 YRNSTLTYLLK 237
           YR S LT +L+
Sbjct: 296 YRESKLTRILQ 306

>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355

Iteration: 1
 Score =  127 bits (318), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 64  HQLFDQIPSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSS 123
           ++  D+I    +    +SYLE+YNE + DLL +    L VRE    G+ V  L++H   S
Sbjct: 141 YKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS-GPLAVREDTQKGVVVHGLTLHQPKS 199
Query: 124 FSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQ--KCSQINLVD 181
             E+   L  GNK R    T+MN  SSRSH++FQI L   +D  +S+ Q  + ++++L+D
Sbjct: 200 SEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLR-QQDKTASINQNVRIAKMSLID 258
Query: 182 LAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD---HSAVPPYRNSTLTYLLK 237
           LAGSER + + A   RF EG NIN SL+ LG VI  L+D    +   PYRNS LT LLK
Sbjct: 259 LAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLK 317

>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395

Iteration: 1
 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 123/240 (51%), Gaps = 35/240 (14%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK------ETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLE 84
           G N  VF +   G     +++      E  G+IP     +F  I  +   Q  V+ SYLE
Sbjct: 100 GFNGTVFAYGQTGTGKTYTMQGTWVEPELRGVIPNAFEHIFTHISRSQNQQYLVRASYLE 159
Query: 85  IYNEFVYDLLSSER-KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           IY E + DLLS E  K L+++E+P+TG+++ DLS     +  E++  ++ GN+ RA  ST
Sbjct: 160 IYQEEIRDLLSKEPGKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGST 219
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQ-KCSQINLVDLAGSER-------VAQTKATE 195
           +MN+ SSRSH+IF I +  +E         +  ++NLVDLAGSER        A   AT 
Sbjct: 220 HMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATP 279
Query: 196 -----------------ERFKEGRNINLSLMTLGQVITNLS-DHSAVPPYRNSTLTYLLK 237
                            ER KE   INLSL  LG VI  L+ + S   PYR+S LT LL+
Sbjct: 280 SSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQ 339

>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 54  ETTGIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTG 110
           E  GIIPR    +F+ I S   N+   +K+SY EIY + + DLL   +  L V E  +  
Sbjct: 103 EGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRV 162
Query: 111 IFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSV 170
            +V   +   V S  E+   + EG   R  A TNMN+ SSRSHSIF I +   +   +  
Sbjct: 163 PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINV---KQENTQT 219
Query: 171 TQKCS-QINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRN 229
            QK S ++ LVDLAGSE+V++T A      E +NIN SL  LG VI+ L++ S   PYR+
Sbjct: 220 EQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRD 279
Query: 230 STLTYLLK 237
           S +T +L+
Sbjct: 280 SKMTRILQ 287

>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 54  ETTGIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTG 110
           E  GIIPR    +F+ I S   N+   +K+SY EIY + + DLL   +  L V E  +  
Sbjct: 103 EGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRV 162
Query: 111 IFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSV 170
            +V   +   V S  E+   + EG   R  A TNMN+ SSRSHSIF I +   +   +  
Sbjct: 163 PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINV---KQENTQT 219
Query: 171 TQKCS-QINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRN 229
            QK S ++ LVDLAGSE+V++T A      E +NIN SL  LG VI+ L++ S   PYR+
Sbjct: 220 EQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRD 279
Query: 230 STLTYLLK 237
           S +T +L+
Sbjct: 280 SKMTRILQ 287

>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 54  ETTGIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTG 110
           E  GIIPR    +F+ I S   N+   +K+SY EIY + + DLL   +  L V E  +  
Sbjct: 103 EGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRV 162
Query: 111 IFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSV 170
            +V   +   V S  E+   + EG   R  A TNMN+ SSRSHSIF I +   +   +  
Sbjct: 163 PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINV---KQENTQT 219
Query: 171 TQKCS-QINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRN 229
            QK S ++ LVDLAGSE+V++T A      E +NIN SL  LG VI+ L++ S   PYR+
Sbjct: 220 EQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRD 279
Query: 230 STLTYLLK 237
           S +T +L+
Sbjct: 280 SKMTRILQ 287

>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373

Iteration: 1
 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 114/191 (59%), Gaps = 14/191 (7%)
Query: 57  GIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLLSSERKALKVRESPDT----GI 111
           GIIPR    LFD++    V   ++ISYLE+YNE + DLLS++    K+R   D+     +
Sbjct: 137 GIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLSTD-DTTKIRIFDDSTKKGSV 195
Query: 112 FVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTED--TGSS 169
            +  L    V S  ++ K L +G + R TA+T MN +SSRSH++F I + + E+   G  
Sbjct: 196 IIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGED 255
Query: 170 VTQKCSQINLVDLAGSERVAQTKATEE---RFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
           +  K  ++NLVDLAGSE V+  KA  E   R +E  NIN SL+TLG+VIT L D +   P
Sbjct: 256 ML-KIGKLNLVDLAGSENVS--KAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVP 312
Query: 227 YRNSTLTYLLK 237
           YR S LT LL+
Sbjct: 313 YRESKLTRLLQ 323

>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 109/207 (52%), Gaps = 15/207 (7%)
Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSS- 96
           ++MMG   +   +   GI+PR   Q+F  I   P++ +  V++SYLEIYNE ++DLLS+ 
Sbjct: 120 YTMMGATENYKHR---GILPRALQQVFRMIEERPTHAIT-VRVSYLEIYNESLFDLLSTL 175
Query: 97  -----ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSR 151
                    + + E+P  G+F+  LSVH  S   +    L EG   R  AS  MN  SSR
Sbjct: 176 PYVGPSVTPMTIVENPQ-GVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSR 234
Query: 152 SHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTL 211
           SH IF I L     T S      S+INLVDLAGSER+ ++ +  +  KE   IN SL  L
Sbjct: 235 SHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFL 294
Query: 212 GQVITNLSDHSAVP-PYRNSTLTYLLK 237
            Q I  L D      P+R   LT+ LK
Sbjct: 295 EQAIIALGDQKRDHIPFRQCKLTHALK 321

>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 120/218 (55%), Gaps = 18/218 (8%)
Query: 33  GTNEFVFHFSMMGDNLDSSLKE-TTGIIPRFCHQLFDQIP----SNMVAQVKISYLEIYN 87
           GTN  VF +   G     ++   T G+IP    ++F+ I           V+  ++EIYN
Sbjct: 461 GTNVCVFAYGQTGSGKTFTMSHPTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYN 520
Query: 88  EFVYDLLSSE---RKALKVRESPDTG-IFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           E + DLL+ +       +++     G   V+++S   + S  +    L++ NK R+TA+T
Sbjct: 521 EAIVDLLNPKIDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAAT 580
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCS--QINLVDLAGSERVAQTKATEERFKEG 201
             ND SSRSHSIF I L       +S+T++ S   +NL+DLAGSER+  ++A  +R KE 
Sbjct: 581 KSNDHSSRSHSIFIIDLQ----GYNSLTKESSYGTLNLIDLAGSERLNNSRAEGDRLKET 636
Query: 202 RNINLSLMTLGQVI--TNLSDHSAVPPYRNSTLTYLLK 237
           + IN SL  LG VI   NL D S V PYRNS LTYLLK
Sbjct: 637 QAINKSLSCLGDVIHSLNLKDGSHV-PYRNSKLTYLLK 673

>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420

Iteration: 1
 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEI 85
           G N  +F +   G     ++    E+ G+IPR    LFD I          ++K ++LEI
Sbjct: 145 GYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEI 204
Query: 86  YNEFVYDLLSSERKALKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           YNE +YDLLS+E+K +++R + +    I+VS+++   V   + ++  +      RATAST
Sbjct: 205 YNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATAST 264
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
             N++SSRSH++ +++L         ++     INLVDLAGSE    +  T  R  E +N
Sbjct: 265 AGNERSSRSHAVTKLELIGRHAEKQEIS--VGSINLVDLAGSE----SPKTSTRMTETKN 318
Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           IN SL  L  VI  L       PYRNS LT+LL
Sbjct: 319 INRSLSELTNVILALLQKQDHIPYRNSKLTHLL 351

>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEI 85
           G N  +F +   G     ++    E+ G+IPR    LFD I          ++K ++LEI
Sbjct: 131 GYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEI 190
Query: 86  YNEFVYDLLSSERKALKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           YNE +YDLLS+E+K +++R + +    I+VS+++   V   + ++  +      RATAST
Sbjct: 191 YNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATAST 250
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
             N++SSRSH++ +++L         ++     INLVDLAGSE    +  T  R  E +N
Sbjct: 251 AGNERSSRSHAVTKLELIGRHAEKQEIS--VGSINLVDLAGSE----SPKTSTRMTETKN 304
Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           IN SL  L  VI  L       PYRNS LT+LL
Sbjct: 305 INRSLSELTNVILALLQKQDHIPYRNSKLTHLL 337

>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEI 85
           G N  +F +   G     ++    E+ G+IPR    LFD I          ++K ++LEI
Sbjct: 137 GYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEI 196
Query: 86  YNEFVYDLLSSERKALKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           YNE +YDLLS+E+K +++R + +    I+VS+++   V   + ++  +      RATAST
Sbjct: 197 YNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATAST 256
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
             N++SSRSH++ +++L         ++     INLVDLAGSE    +  T  R  E +N
Sbjct: 257 AGNERSSRSHAVTKLELIGRHAEKQEIS--VGSINLVDLAGSE----SPKTSTRMTETKN 310
Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           IN SL  L  VI  L       PYRNS LT+LL
Sbjct: 311 INRSLSELTNVILALLQKQDHIPYRNSKLTHLL 343

>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEI 85
           G N  +F +   G     ++    E+ G+IPR    LFD I          ++K ++LEI
Sbjct: 134 GYNICIFAYGQSGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEI 193
Query: 86  YNEFVYDLLSSERKALKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           YNE +YDLLS+E+K +++R + +    I+VS+++   V   + ++  +      RATAST
Sbjct: 194 YNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATAST 253
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
             N++SSRSH++ +++L         ++     INLVDLAGSE    +  T  R  E +N
Sbjct: 254 AGNERSSRSHAVTKLELIGRHAEKQEIS--VGSINLVDLAGSE----SPKTSTRMTETKN 307
Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           IN SL  L  VI  L       PYRNS LT+LL
Sbjct: 308 INRSLSELTNVILALLQKQDHIPYRNSKLTHLL 340

>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 113/215 (52%), Gaps = 13/215 (6%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIY 86
           G N  +F +   G     +++   E  GI  R    LF ++    S+    + +S  EIY
Sbjct: 79  GFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIY 138
Query: 87  NEFVYDLLSSE-RKALKVRESPDTG--IFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           NE + DLL  E ++ L++R  PD    ++V  L+   V S  ++ K    G+  R T  T
Sbjct: 139 NEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFT 198
Query: 144 NMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGR 202
           N+N+ SSRSH++  + +   +  TG   T K   +NLVDLAGSERV ++ A   R +E +
Sbjct: 199 NLNEHSSRSHALLIVTVRGVDCSTGLRTTGK---LNLVDLAGSERVGKSGAEGSRLREAQ 255
Query: 203 NINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           +IN SL  LG VI  L       P+RNS LTYLL+
Sbjct: 256 HINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQ 290

>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 57  GIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFV 113
           GIIPR  + +F+ I +   N+   +K+SY EIY + + DLL   +  L V E  +   +V
Sbjct: 113 GIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYV 172
Query: 114 SDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQK 173
              +   VSS  ++ + + EG   R  A TNMN+ SSRSHS+F I   + ++   +  + 
Sbjct: 173 KGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLIN--VKQENLENQKKL 230
Query: 174 CSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP-PYRNSTL 232
             ++ LVDLAGSE+V++T A      E +NIN SL  LG VI+ L+D +    PYR+S L
Sbjct: 231 SGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKL 290
Query: 233 TYLLK 237
           T +L+
Sbjct: 291 TRILQ 295

>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 113/227 (49%), Gaps = 22/227 (9%)
Query: 33  GTNEFVFHFSMMGDN---------LDSSLKETTGIIPRFCHQLFDQIPSN--MVAQVKIS 81
           G N  VF +   G           + S L++  GI+PR   + F  I  N  +   V +S
Sbjct: 82  GFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVS 141
Query: 82  YLEIYNEFVYDLL--SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARA 139
           YLE+Y E   DLL   +  + +++RE     + +  +    V    E+   L  GN AR 
Sbjct: 142 YLEVYKEEFRDLLEVGTASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARH 201
Query: 140 TASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKC------SQINLVDLAGSERVAQTKA 193
           T +T++N  SSRSH++F + L       S + +        S+ + VDLAGSERV +T +
Sbjct: 202 TGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGS 261
Query: 194 TEERFKEGRNINLSLMTLGQVITNLSD---HSAVPPYRNSTLTYLLK 237
           T ER KE   IN SL+ LG VI+ L D     +  PYR+S +T +LK
Sbjct: 262 TGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILK 308

>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 15/213 (7%)
Query: 33  GTNEFVFHFSMMGDNLDSSLK---ETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEI 85
           G N  +F +   G     ++    E+ G+IPR    LFD I          ++K ++LEI
Sbjct: 134 GYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEI 193
Query: 86  YNEFVYDLLSSERKALKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           YNE +YDLLS+E+K +++R + +    I+VS+++   V   + ++  +      RATAST
Sbjct: 194 YNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATAST 253
Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
             N++SSRSH++ +++L         ++     INLVDLAGSE    +  T  R  E +N
Sbjct: 254 AGNERSSRSHAVTKLELIGRHAEKQEIS--VGSINLVDLAGSE----SPKTSTRMTETKN 307
Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           I  SL  L  VI  L       PYRNS LT+LL
Sbjct: 308 IKRSLSELTNVILALLQKQDHIPYRNSKLTHLL 340

>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 33  GTNEFVFHFSMMGDN---------LDSSLKETTGIIPRFCHQLFDQIPSN--MVAQVKIS 81
           G N  VF +   G           + S L++  GI+PR   + F  I  N  +   V +S
Sbjct: 82  GFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVS 141
Query: 82  YLEIYNEFVYDLL--SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARA 139
           YLE+Y E   DLL   +  + +++RE     + +  +    V    E+   L  GN AR 
Sbjct: 142 YLEVYKEEFRDLLEVGTASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARH 201
Query: 140 TASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKC------SQINLVDLAGSERVAQTKA 193
           T +T++N  SSRSH++F + L       S + +        S+ + VDLAGSERV +T +
Sbjct: 202 TGATHLNHLSSRSHTVFTVTLKQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGS 261
Query: 194 TEERFKEGRNINLSLMTLGQVITNLSD---HSAVPPYRNSTLTYLLK 237
           T E  KE   IN SL+ LG VI+ L D     +  PYR+S +T +LK
Sbjct: 262 TGELRKESIQINSSLLALGNVISALGDPQRRGSNIPYRDSKITRILK 308

>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 33/242 (13%)
Query: 26  RNIFEKI---------GTNEFVFHFSMMGDNLDSS-LKETTGIIPRFCHQLFDQIPSNMV 75
           + IFE+I         G N  +F +   G     + L    G+IP     +F +  +N+ 
Sbjct: 68  KEIFEEIRQLVQSSLDGYNVCIFAYGQTGSGKTYTMLNAGDGMIPMTLSHIF-KWTANLK 126
Query: 76  A-----QVKISYLEIYNEFVYDLLSSERKALKVRESPDT------------GIFVSDLSV 118
                 +++  Y+EIYNE + DLL   +    + E  D+            G ++++++ 
Sbjct: 127 ERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTR 186
Query: 119 HGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQIN 178
             ++S S++   L + +K R+TA+T  N++SSRSHS+F + +          +Q   ++N
Sbjct: 187 MKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTGETSQ--GKLN 244
Query: 179 LVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYL 235
           LVDLAGSER+  +  T ER +E +NIN SL  LG VI  L+   A     P+RNS LTYL
Sbjct: 245 LVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYL 304
Query: 236 LK 237
           L+
Sbjct: 305 LQ 306

>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 26  RNIFEKIGTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQLFDQIPSNMVAQ----- 77
           R++ E  G N  V  +   G     ++    E  G+IPR    L  Q+     A+     
Sbjct: 92  RHLLE--GQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLL-QLTREEGAEGRPWA 148
Query: 78  --VKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGN 135
             V +SYLEIY E V DLL      L +RE     I +  LS   +SSF++ ++     +
Sbjct: 149 LSVTMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPAS 208
Query: 136 KARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATE 195
           + R   +T +N +SSRSH++  +++   E   +   Q+  ++ L+DLAGSE   +T    
Sbjct: 209 RNRTVGATRLNQRSSRSHAVLLVKVDQRERL-APFRQREGKLYLIDLAGSEDNRRTGNKG 267
Query: 196 ERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
            R KE   IN SL  LG+V+  L+      PYR+S LT LL+
Sbjct: 268 LRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQ 309

>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 41  FSM-MGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQ-----VKISYLEIYNEFVYDLL 94
           F+M  G   D  L+   G+IPR    LF  +   +  Q        SY+EIYNE V DLL
Sbjct: 131 FTMEGGPGGDPQLE---GLIPRALRHLFS-VAQELSGQGWTYSFVASYVEIYNETVRDLL 186
Query: 95  SSE-RKALKV-----RESPDTG-IFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND 147
           ++  RK         R  P +  + V++     VS   E+   L    + RA A T  N+
Sbjct: 187 ATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNE 246
Query: 148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERV----AQTKATEERFKEGRN 203
           +SSRSHS+FQ+Q++   +  S   Q  + ++LVDLAGSER+    A      ER +E + 
Sbjct: 247 RSSRSHSVFQLQIS--GEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQA 304
Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           IN SL TLG VI  LS+  +  PYRNS LTYLL+
Sbjct: 305 INSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQ 338

>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 111/226 (49%), Gaps = 24/226 (10%)
Query: 33  GTNEFVFHFSMMGDNLDSS-LKETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GI+P   + +F  I          +V   ++EIYN
Sbjct: 105 GYNVCIFAYGQTGSGKTYTMLNPGDGIVPATINHIFSWIDKLAARGWSYKVSCEFIEIYN 164
Query: 88  EFVYDLLSS--------ERKA---LKVRESPD-TGIFVSDLSVHGVSSFSEMQKWLSEGN 135
           E + DLL S        +R A    ++R   +    ++++++   + S   + K L   N
Sbjct: 165 ENIVDLLRSGAPSQENNDRNADSKHEIRHDQELKTTYITNITTCVLDSRDTVDKVLKRAN 224
Query: 136 KARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQI-NLVDLAGSERVAQTKAT 194
           K R+TAST  N+ SSRSHSIF I L   E       +K   I NLVDLAGSER+  +   
Sbjct: 225 KLRSTASTAANEHSSRSHSIFIIHL---EGKNEGTGEKSQGILNLVDLAGSERLNSSMVV 281
Query: 195 EERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
            ER +E ++IN SL  LG VI  L+         P+RNS LTYLL+
Sbjct: 282 GERLRETQSINKSLSCLGDVIHALNSPDGQKRHIPFRNSKLTYLLQ 327

>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386

Iteration: 1
 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 13/214 (6%)
Query: 33  GTNEFVFHFSMMGDNLDSSL---KETTGIIPRFCHQLFDQIPSN---MVAQVKISYLEIY 86
           G N  +F +   G     ++   +   G+ PR   +LF+ +  +       +K   +E+Y
Sbjct: 86  GYNVCIFAYGQTGSGKTFTIYGHESNPGLTPRATKELFNILKRDSKRFSFSLKAYMVELY 145
Query: 87  NEFVYDLL---SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
            + + DLL   S+ R  L++++     +FV +++   +S+  E++  L  G++ R  + T
Sbjct: 146 QDTLVDLLLPKSARRLKLEIKKDSKGMVFVENVTTIPISTLEELRMILERGSERRHVSGT 205
Query: 144 NMNDKSSRSHSIFQIQL-TLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGR 202
           NMN++SSRSH I  + + ++   T S+   K S    VDLAGSERV ++ +   + KE +
Sbjct: 206 NMNEESSRSHLILSVVIESIDLQTQSAARGKLS---FVDLAGSERVKKSGSAGNQLKEAQ 262
Query: 203 NINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLL 236
           +IN SL  LG VI  LS  +   PYRN  LT L+
Sbjct: 263 SINKSLSALGDVIGALSSGNQHIPYRNHKLTMLM 296

>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403

Iteration: 1
 Score = 93.6 bits (231), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 33  GTNEFVFHFSMMGDNLD-SSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GIIP     +F+ I          +V   ++EIYN
Sbjct: 139 GYNVAIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYN 198
Query: 88  EFVYDLLSSERKALKVRESPDTGIFVSDLSVHG---------------VSSFSEMQKWLS 132
           E + DLL S+          DT I +     H                + S   ++  L 
Sbjct: 199 ENIVDLLRSDNN-----NKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILK 253
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQT 191
           + NK R+TAST  N+ SSRSHSIF I L+ +   TG+        +NLVDLAGSER+  +
Sbjct: 254 KANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGA---HSYGTLNLVDLAGSERINVS 310
Query: 192 KATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           +   +R +E +NIN SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 311 QVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 359

>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 33  GTNEFVFHFSMMGDNLD-SSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GIIP     +F+ I          +V   ++EIYN
Sbjct: 82  GYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 141
Query: 88  EFVYDLLSSERKALKVRESPDTGIFVSDLSVHG---------------VSSFSEMQKWLS 132
           E + DLL S+          DT I +     H                + S   ++  L 
Sbjct: 142 ENIVDLLRSDNN-----NKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILK 196
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQT 191
           + NK R+TAST  N+ SSRSHSIF I L+ +   TG+        +NLVDLAGSER+  +
Sbjct: 197 KANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGA---HSYGTLNLVDLAGSERINVS 253
Query: 192 KATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           +   +R +E +NIN SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 254 QVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 302

>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 33  GTNEFVFHFSMMGDNLD-SSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GIIP     +F+ I          +V   ++EIYN
Sbjct: 94  GYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 153
Query: 88  EFVYDLLSSERKALKVRESPDTGIFVSDLSVHG---------------VSSFSEMQKWLS 132
           E + DLL S+          DT I +     H                + S   ++  L 
Sbjct: 154 ENIVDLLRSDNN-----NKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILK 208
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQT 191
           + NK R+TAST  N+ SSRSHSIF I L+ +   TG+        +NLVDLAGSER+  +
Sbjct: 209 KANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGA---HSYGTLNLVDLAGSERINVS 265
Query: 192 KATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           +   +R +E +NIN SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 266 QVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 314

>pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 19/191 (9%)
Query: 52  LKETTGIIPRFCHQLFDQIPSNM-----VAQVKISYLEIYNEFVYDLLSSERKALKVRES 106
           L E  GI+PR    +F+++ +         QV  S++EIYNE  +DLL S          
Sbjct: 121 LPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGS------TPHM 174
Query: 107 PDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT 166
           P         +   + S +++   L  G + R    TNMN  SSRSH+I  I +      
Sbjct: 175 PMVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHV------ 228
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
             S T   S++N+VDLAGSE V +T       +EG NINL L+++ +V+ +++    V P
Sbjct: 229 -KSKTHH-SRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIP 286
Query: 227 YRNSTLTYLLK 237
           YR+S LT +L+
Sbjct: 287 YRDSVLTTVLQ 297

>pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 19/191 (9%)
Query: 52  LKETTGIIPRFCHQLFDQIPSNM-----VAQVKISYLEIYNEFVYDLLSSERKALKVRES 106
           L E  GI+PR    +F+++ +         QV  S++EIYNE  +DLL S          
Sbjct: 121 LPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGS------TPHM 174
Query: 107 PDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDT 166
           P         +   + S +++   L  G + R    TNMN  SSRSH+I  I +      
Sbjct: 175 PMVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHV------ 228
Query: 167 GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP 226
             S T   S++N+VDLAGSE V +T       +EG NINL L+++ +V+ +++    V P
Sbjct: 229 -KSKTHH-SRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIP 286
Query: 227 YRNSTLTYLLK 237
           YR+S LT +L+
Sbjct: 287 YRDSVLTTVLQ 297

>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 107/229 (46%), Gaps = 32/229 (13%)
Query: 33  GTNEFVFHFSMMGDNLD-SSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GIIP     +F+ I          +V   ++EIYN
Sbjct: 83  GYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142
Query: 88  EFVYDLLSSERKALKVRESPDTGIFVSDLSVHG---------------VSSFSEMQKWLS 132
           E + DLL S+          DT I +     H                + S   ++  L 
Sbjct: 143 ENIVDLLRSDNN-----NKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILK 197
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQT 191
           + NK R+TAST  N+ SSRSHSIF I L+ +   TG+        +NLVDLAGSER+  +
Sbjct: 198 KANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGA---HSYGTLNLVDLAGSERINVS 254
Query: 192 KATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           +   +R +E +NI  SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 255 QVVGDRLRETQNIKKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 303

>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 107/229 (46%), Gaps = 32/229 (13%)
Query: 33  GTNEFVFHFSMMGDNLD-SSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GIIP     +F+ I          +V   ++EIYN
Sbjct: 83  GYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142
Query: 88  EFVYDLLSSERKALKVRESPDTGIFVSDLSVHG---------------VSSFSEMQKWLS 132
           E + DLL S+          DT I +     H                + S   ++  L 
Sbjct: 143 ENIVDLLRSDNN-----NKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILK 197
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQT 191
           + NK R+TAST  N+ SSRSHSIF I L+ +   TG+        +NLVDLAGS R+  +
Sbjct: 198 KANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGA---HSYGTLNLVDLAGSARINVS 254
Query: 192 KATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           +   +R +E +NIN SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 255 QVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 303

>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 107/229 (46%), Gaps = 32/229 (13%)
Query: 33  GTNEFVFHFSMMGDNLD-SSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYN 87
           G N  +F +   G     + L    GIIP     +F+ I          +V   ++EIYN
Sbjct: 83  GYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142
Query: 88  EFVYDLLSSERKALKVRESPDTGIFVSDLSVHG---------------VSSFSEMQKWLS 132
           E + DLL S+          DT I +     H                + S   ++  L 
Sbjct: 143 ENIVDLLRSDNN-----NKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILK 197
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQT 191
           + NK R+TAST  N+ SS SHSIF I L+ +   TG+        +NLVDLAGSER+  +
Sbjct: 198 KANKLRSTASTASNEHSSASHSIFIIHLSGSNAKTGA---HSYGTLNLVDLAGSERINVS 254
Query: 192 KATEERFKEGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           +   +R +E +NIN SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 255 QVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 303

>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 8/186 (4%)
Query: 57  GIIPRFCHQLFD--QIPSNMVA-QVKISYLEIYNEFVYDLL---SSERKALKVRESPDTG 110
           G+ PR   +LF   +  SN  +  +K   +E+Y + + DLL    ++R  L +++     
Sbjct: 105 GLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGM 164
Query: 111 IFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSV 170
           + V +++V  +S++ E++  +  G++ R T  T MN++SSRSH I  + +  T     ++
Sbjct: 165 VSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAI 224
Query: 171 TQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNS 230
            +   +++ VDLAGSERV ++ +   + KE ++IN SL  LG VI+ LS  +   PYRN 
Sbjct: 225 AR--GKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNH 282
Query: 231 TLTYLL 236
            LT L+
Sbjct: 283 KLTMLM 288

>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 57  GIIPRFCHQLFDQIPS---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFV 113
           GIIPR  H +FD I S   N+   +K+SY EIY + + DLL   +  L V E  +   +V
Sbjct: 106 GIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLAVHEDKNRVPYV 165
Query: 114 SDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQK 173
              +   VSS  E+   + EG   R  A TNMN+ SSRSHSIF I   + ++   +  + 
Sbjct: 166 KGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLI--NIKQENVETEKKL 223
Query: 174 CSQINLVDLAGSERV 188
             ++ LVDLAGSE+V
Sbjct: 224 SGKLYLVDLAGSEKV 238

>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
Query: 77  QVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
           +V +++ EIYN  ++DLL+ + K L+V E     + V  L  H V+S  ++ K +  G+ 
Sbjct: 190 EVYVTFFEIYNGKLFDLLNKKAK-LRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSA 248
Query: 137 ARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEE 196
            R +  T  N  SSRSH+ FQI L        +  +   + +LVDLAG+ER A T + + 
Sbjct: 249 CRTSGQTFANSNSSRSHACFQIIL-------RAKGRMHGKFSLVDLAGNERGADTSSADR 301
Query: 197 RFK-EGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           + + EG  IN SL+ L + I  L  + A  P+R S LT +L+
Sbjct: 302 QTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLR 343

>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 73  NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLS 132
           N+  +V +++ EIYN  V+DLL+ + K L+V E     + V  L  + V+   ++ K ++
Sbjct: 134 NLNLEVYVTFFEIYNGKVFDLLNKKAK-LRVLEDSRQQVQVVGLQEYLVTCADDVIKMIN 192
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK 192
            G+  R +  T  N  SSRSH+ FQI L     T   +  K    +LVDLAG+ER A T 
Sbjct: 193 MGSACRTSGQTFANSNSSRSHACFQILLR----TKGRLHGK---FSLVDLAGNERGADTS 245
Query: 193 ATEERFK-EGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           + + + + EG  IN SL+ L + I  L  + A  P+R S LT +L+
Sbjct: 246 SADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLR 291

>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 73  NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLS 132
           N+  +V +++ EIYN  V+DLL+ + K L+V E     + V  L  + V+   ++ K ++
Sbjct: 206 NLNLEVYVTFFEIYNGKVFDLLNKKAK-LRVLEDSRQQVQVVGLQEYLVTCADDVIKMIN 264
Query: 133 EGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK 192
            G+  R +  T  N  SSRSH+ FQI L     T   +  K    +LVDLAG+ER A T 
Sbjct: 265 MGSACRTSGQTFANSNSSRSHACFQILLR----TKGRLHGK---FSLVDLAGNERGADTS 317
Query: 193 ATEERFK-EGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           + + + + EG  IN SL+ L + I  L  + A  P+R S LT +L+
Sbjct: 318 SADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLR 363

>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 77  QVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNK 136
           QV  ++ EIY+  V+DLL+ + K L+V E     + V  L    V    ++ K +  GN 
Sbjct: 228 QVYATFFEIYSGKVFDLLNRKTK-LRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNS 286
Query: 137 ARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEE 196
            R +  T+ N  SSRSH++FQI L               + +L+DLAG+ER A T + + 
Sbjct: 287 CRTSGQTSANAHSSRSHAVFQIILRRKGKLH-------GKFSLIDLAGNERGADTSSADR 339
Query: 197 RFK-EGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           + + EG  IN SL+ L + I  L  +    P+R S LT +L+
Sbjct: 340 QTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLR 381

>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 80  ISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARA 139
           IS+ EIY   +YDLL  +RK +   E+    + V DL +  V +  E+   + +G   R 
Sbjct: 141 ISFYEIYCGKLYDLLQ-KRKMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRK 199
Query: 140 TASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFK 199
               + ND+SSRSH+I  I L   +D   + +    +I  +DLAGSER A T +  ++ +
Sbjct: 200 IGVNSQNDESSRSHAILNIDL---KDINKNTS--LGKIAFIDLAGSERGADTVSQNKQTQ 254
Query: 200 -EGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
            +G NIN SL+ L + I  +       P+R+S LT +L+
Sbjct: 255 TDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLR 293

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	237
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	7e-91
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	5e-05
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	2e-90
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	4e-05
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	2e-89
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	1e-04
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	2e-89
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	2e-04
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	7e-89
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	2e-04
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	2e-88
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	2e-04
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	1e-87
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	2e-04
4a14_A	344	Kinesin, kinesin-like protein KIF7; motor protein,	9e-87
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	2e-86
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	2e-04
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	3e-86
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	1e-04
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	8e-86
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	2e-04
2nr8_A	358	Kinesin-like protein KIF9; motor domain, ADP, stru	9e-85
2nr8_A	358	Kinesin-like protein KIF9; motor domain, ADP, stru	1e-04
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	2e-84
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	9e-05
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	4e-84
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	1e-04
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	2e-83
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	1e-04
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	3e-79
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	2e-04
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	3e-79
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	2e-04
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	3e-79
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	2e-04
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	3e-78
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	1e-04
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	4e-76
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	4e-04
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	6e-76
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	2e-04
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	8e-75
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	2e-73
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	1e-04
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	1e-72
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	7e-05
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	2e-70
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	1e-04
3u06_A	412	Protein claret segregational; motor domain, stalk	2e-70
3u06_A	412	Protein claret segregational; motor domain, stalk	2e-04
2kin_B	100	Kinesin; motor protein, cytoskeleton; HET: ADP; 2.	1e-07
2kin_B	100	Kinesin; motor protein, cytoskeleton; HET: ADP; 2.	3e-05
3kin_B	117	Kinesin heavy chain; motor protein, cytoskeleton;	5e-06
3kin_B	117	Kinesin heavy chain; motor protein, cytoskeleton;	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366

 Score =  270 bits (694), Expect = 7e-91
 Identities = 94/216 (43%), Positives = 129/216 (59%), Gaps = 23/216 (10%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           ++MMG        +  GIIP+ C  LF +I      NM   V++SY+EIY E V DLL+ 
Sbjct: 105 YTMMGKQEK----DQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNP 160

Query: 97  ERKA-LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSI 155
           + K  L+VRE P  G +V DLS   V+S++++Q  +  GNK R  A+TNMN+ SSRSH++
Sbjct: 161 KNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAV 220

Query: 156 FQIQLT--LTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           F I  T    +   +  T+K S+I+LVDLAGSER   T A   R KEG NIN SL TLG+
Sbjct: 221 FNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK 280

Query: 214 VITNLSDHSAVP------------PYRNSTLTYLLK 237
           VI+ L++  + P            PYR+S LT+LL+
Sbjct: 281 VISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR 316

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 12/28 (42%), Positives = 21/28 (75%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A ++P   + +E+L+TLRYA +A+ I
Sbjct: 327 MVAALSPADINYDETLSTLRYADRAKQI 354

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354

 Score =  269 bits (690), Expect = 2e-90
 Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 20/211 (9%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLL-- 94
           ++MMG        +  G+IPR C  LF++           +V++SY+EIYNE V DLL  
Sbjct: 108 YTMMGTA------DQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDP 161

Query: 95  SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
              R+ LKVRE    G +V  LS   V+S+ +++  +SEGNK+R  A+TNMN++SSRSH+
Sbjct: 162 KGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHA 221

Query: 155 IFQIQLT--LTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG 212
           +F+I LT  L +    +  +K  +++LVDLAGSER  +T A  +R KEG NIN SL TLG
Sbjct: 222 VFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLG 281

Query: 213 QVITNLSDHSAVP------PYRNSTLTYLLK 237
            VI+ L+D SA        PYR+S LT+LLK
Sbjct: 282 LVISALADQSAGKNKNKFVPYRDSVLTWLLK 312

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 12/28 (42%), Positives = 22/28 (78%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+AT++P   + +E+L+TLRYA +A++ 
Sbjct: 323 MVATVSPAADNYDETLSTLRYADRAKHH 350

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372

 Score =  267 bits (685), Expect = 2e-89
 Identities = 86/202 (42%), Positives = 118/202 (58%), Gaps = 8/202 (3%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIP--SNMVAQVKISYLEIYNEFVYDLLSSER 98
           ++M G   D   +   G+IP     +F  I    N    V+ SYLEIY E + DLLS ++
Sbjct: 117 YTMEGIRGDPEKR---GVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQ 173

Query: 99  KA-LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
              L+++E PDTG++V DLS     S  E++  ++ GN+ R+  +TNMN+ SSRSH+IF 
Sbjct: 174 TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFV 233

Query: 158 IQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVIT 216
           I +  +E         +  ++NLVDLAGSER A+T A  ER KE   INLSL  LG VI+
Sbjct: 234 ITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVIS 293

Query: 217 NLSD-HSAVPPYRNSTLTYLLK 237
            L D  S   PYR+S LT LL+
Sbjct: 294 ALVDGKSTHIPYRDSKLTRLLQ 315

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 14/28 (50%), Positives = 21/28 (75%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A + P   ++EE+L TLRYA +A+NI
Sbjct: 326 MVANVGPASYNVEETLTTLRYANRAKNI 353

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350

 Score =  266 bits (683), Expect = 2e-89
 Identities = 84/200 (42%), Positives = 117/200 (58%), Gaps = 10/200 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++M G+      KE  G IP     LFD I    SN    V  SYLE+YNE + DL+ + 
Sbjct: 105 WTMGGN------KEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNN 158

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
            K L ++E    GI+V  LS+H V++ +E+   + +G   R  A+T MND SSRSHSIF 
Sbjct: 159 TK-LPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFM 217

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           +++  +E   +    +  ++NLVDLAGSER ++T AT E   EG  INLSL  LG VI+ 
Sbjct: 218 VRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISK 277

Query: 218 LSDHSAVPPYRNSTLTYLLK 237
           L + +   PYR+S LT LL+
Sbjct: 278 LVEGATHIPYRDSKLTRLLQ 297

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           M A I+P  ++ +E+++TLRYA +A+ I  K   NE
Sbjct: 308 MCANISPASTNYDETMSTLRYADRAKQIKNKPRINE 343

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325

 Score =  264 bits (677), Expect = 7e-89
 Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
            +M G   D       GIIPR    +F+ I     N+   +K+SY EIY + + DLL   
Sbjct: 93  HTMEGKLHDPEGM---GIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS 149

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
           +  L V E  +   +V   +   V S  E+   + EG   R  A TNMN+ SSRSHSIF 
Sbjct: 150 KTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFL 209

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           I +               ++ LVDLAGSE+V++T A      E +NIN SL  LG VI+ 
Sbjct: 210 INVKQENTQTEQK--LSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISA 267

Query: 218 LSDHSAVPPYRNSTLTYLLK 237
           L++ S   PYR+S +T +L+
Sbjct: 268 LAEGSTYVPYRDSKMTRILQ 287

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 6/28 (21%), Positives = 15/28 (53%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++   +P   +  E+ +TL +  +A+ I
Sbjct: 298 IVICCSPSSYNESETKSTLLFGQRAKTI 325

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355

 Score =  264 bits (677), Expect = 2e-88
 Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 8/201 (3%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++MMG ++D    +  G+IPR   Q+F  I    +N+   V++SY+EIY E + DLL+ +
Sbjct: 96  YTMMGTSIDDP--DGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQ 153

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
              L V E  + G++V  L    VSS  E+ + +  G  ARA A+TNMN +SSRSHSIF 
Sbjct: 154 NDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFV 213

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           I +T       S   K  Q+ LVDLAGSE+V +T A+ +  +E + IN SL  LG VI  
Sbjct: 214 ITITQKNVETGSA--KSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINA 271

Query: 218 LSD-HSAVPPYRNSTLTYLLK 237
           L+D  S+  PYR+S LT +L+
Sbjct: 272 LTDGKSSHVPYRDSKLTRILQ 292

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           ++   +P   +  E+L+TLR+ ++A++I  K   N 
Sbjct: 303 LIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNA 338

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443

 Score =  265 bits (679), Expect = 1e-87
 Identities = 93/232 (40%), Positives = 122/232 (52%), Gaps = 41/232 (17%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI------PSNMVAQVKISYLEIYNEFVYDLL 94
           ++MMG        +  G+IPR C  LF +I        N+   VK+SY E+YNE V DLL
Sbjct: 152 YTMMGT------PDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLL 205

Query: 95  SSERKA-----LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           +          LKVRESP  G +V DL+   V    E+ +W+  G+ +R  AST MND S
Sbjct: 206 APVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTS 265

Query: 150 SRSHSIFQIQLTLTE--DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLS 207
           SRSH++F I L            T++ S+I LVDLAGSER   T+AT +R +EG NIN S
Sbjct: 266 SRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKS 325

Query: 208 LMTLGQVITNLSDHSAVP----------------------PYRNSTLTYLLK 237
           L TLG+VI  L+D  +                        PYR+S LT+LLK
Sbjct: 326 LTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLK 377

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A I+P  +  +E+L+TLRYA QA+ I
Sbjct: 388 MIACISP--TDYDETLSTLRYADQAKRI 413

>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344

 Score =  259 bits (665), Expect = 9e-87
 Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 13/210 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI--PSNMVAQVKISYLEIYNEFVYDLLSSE- 97
           ++M   ++ S L++  GI+PR   + F  I     +   V +SYLE+Y E   DLL    
Sbjct: 99  YTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGT 158

Query: 98  -RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIF 156
             + +++RE     + +  +    V    E+   L  GN AR T +T++N  SSRSH++F
Sbjct: 159 ASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVF 218

Query: 157 QIQLTLTEDTGSSVTQ------KCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMT 210
            + L       S + +        S+ + VDLAGSERV +T +T ER KE   IN SL+ 
Sbjct: 219 TVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLA 278

Query: 211 LGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           LG VI+ L D        PYR+S +T +LK
Sbjct: 279 LGNVISALGDPQRRGSHIPYRDSKITRILK 308

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349

 Score =  259 bits (664), Expect = 2e-86
 Identities = 84/206 (40%), Positives = 119/206 (57%), Gaps = 15/206 (7%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVAQ--VKISYLEIYNEFVYDLL--SS 96
           ++MMG        +  G+IPR  H +F +I      +  +++SY+EIYNE + DLL  + 
Sbjct: 93  YTMMGSE------DHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQ 146

Query: 97  ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIF 156
           + K L +RE  +  ++V+DL+   V +     KW+++G K+R    T MN +SSRSH+IF
Sbjct: 147 KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIF 206

Query: 157 QIQLT---LTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           ++ L      E +    + K S +NLVDLAGSER AQT A   R KEG NIN SL  LGQ
Sbjct: 207 RMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQ 266

Query: 214 VITNLSDHSAVP--PYRNSTLTYLLK 237
           VI  LSD        YR+S LT +L+
Sbjct: 267 VIKKLSDGQVGGFINYRDSKLTRILQ 292

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           ++ TI P     +E+L  L++A  A+ +      NE
Sbjct: 303 IICTITP--VSFDETLTALQFASTAKYMKNTPYVNE 336

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388

 Score =  260 bits (666), Expect = 3e-86
 Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 13/203 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI------PSNMVAQVKISYLEIYNEFVYDLL 94
            +M+G        E  G+IPR    L                 V +SYLEIY E V DLL
Sbjct: 114 HTMLGSP------EQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLL 167

Query: 95  SSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
                 L +RE     I +  LS   +SSF++ ++     ++ R   +T +N +SSRSH+
Sbjct: 168 DPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHA 227

Query: 155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQV 214
           +  +++   E       Q+  ++ L+DLAGSE   +T     R KE   IN SL  LG+V
Sbjct: 228 VLLVKVDQRERLAPF-RQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKV 286

Query: 215 ITNLSDHSAVPPYRNSTLTYLLK 237
           +  L+      PYR+S LT LL+
Sbjct: 287 VDALNQGLPRVPYRDSKLTRLLQ 309

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 8/36 (22%), Positives = 21/36 (58%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           ++A I P +    ++++ L +A +++ +  +  TNE
Sbjct: 320 LIANIAPERRFYLDTVSALNFAARSKEVINRPFTNE 355

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365

 Score =  258 bits (661), Expect = 8e-86
 Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
            +M G   DS  +   GIIPR  + +F+ I     N+   +K+SY EIY + + DLL   
Sbjct: 100 HTMEGVIGDSVKQ---GIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS 156

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
           +  L V E  +   +V   +   VSS  ++ + + EG   R  A TNMN+ SSRSHS+F 
Sbjct: 157 KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFL 216

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN 217
           I +               ++ LVDLAGSE+V++T A      E +NIN SL  LG VI+ 
Sbjct: 217 INVKQENLENQKK--LSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISA 274

Query: 218 LSD-HSAVPPYRNSTLTYLLK 237
           L+D +    PYR+S LT +L+
Sbjct: 275 LADGNKTHIPYRDSKLTRILQ 295

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 5/28 (17%), Positives = 15/28 (53%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++   +P   +  E+ +TL +  +A+ +
Sbjct: 306 IVICCSPASFNESETKSTLDFGRRAKTV 333

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355

 Score =  254 bits (651), Expect = 2e-84
 Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 14/204 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
            +M+G        +  G++      L+  +       +    +SYLE+YNE + DLL + 
Sbjct: 121 HTMLGS------ADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS 174

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
              L VRE    G+ V  L++H   S  E+   L  GNK R    T+MN  SSRSH++FQ
Sbjct: 175 GP-LAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQ 233

Query: 158 IQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVIT 216
           I L   +     +   + ++++L+DLAGSER + + A   RF EG NIN SL+ LG VI 
Sbjct: 234 IYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVIN 293

Query: 217 NLSD---HSAVPPYRNSTLTYLLK 237
            L+D    +   PYRNS LT LLK
Sbjct: 294 ALADSKRKNQHIPYRNSKLTRLLK 317

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 9/28 (32%), Positives = 19/28 (67%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A ++P     +++  TL+YA +A++I
Sbjct: 328 MIAAVSPSSVFYDDTYNTLKYANRAKDI 355

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344

 Score =  253 bits (648), Expect = 4e-84
 Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 19/202 (9%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI-----PSNMVAQVKISYLEIYNEFVYDLLS 95
           +SM        L E  GI+PR    +F+++      +    QV  S++EIYNE  +DLL 
Sbjct: 110 YSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLG 169

Query: 96  SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSI 155
           S          P         +   + S +++   L  G + R    TNMN  SSRSH+I
Sbjct: 170 STP------HMPMVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAI 223

Query: 156 FQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVI 215
             I +              S++N+VDLAGSE V +T       +EG NINL L+++ +V+
Sbjct: 224 VTIHVKSKT--------HHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVV 275

Query: 216 TNLSDHSAVPPYRNSTLTYLLK 237
            +++    V PYR+S LT +L+
Sbjct: 276 MSMAAGHTVIPYRDSVLTTVLQ 297

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
            LA I+P Q  + E+L+TLR+   A+  
Sbjct: 308 FLACISPHQCDLSETLSTLRFGTSAKAA 335

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359

 Score =  252 bits (645), Expect = 2e-83
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 12/209 (5%)

Query: 41  FSMMGDNLD-----SSLKETTGIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLL 94
           F+M G+               GIIPR  HQ+F+++  N     VK+S LEIYNE ++DLL
Sbjct: 104 FTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLL 163

Query: 95  SSER---KALKVRESPDT--GIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
           +      + L++ + P    G+ +  L    V +  E+ + L +G   R TA+T MN  S
Sbjct: 164 NPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYS 223

Query: 150 SRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSL 208
           SRSHS+F + + + E         K  ++NLVDLAGSE + ++ A ++R +E  NIN SL
Sbjct: 224 SRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSL 283

Query: 209 MTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           +TLG+VIT L + +   PYR S LT +L+
Sbjct: 284 LTLGRVITALVERTPHVPYRESKLTRILQ 312

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 14/28 (50%), Positives = 23/28 (82%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++ATI+P   ++EE+L+TL YA +A+NI
Sbjct: 323 IIATISPASLNLEETLSTLEYAHRAKNI 350

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387

 Score =  242 bits (619), Expect = 3e-79
 Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 13/202 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
            +M GD    +   + GI       +F          +  +V +++ EIYN  ++DLL+ 
Sbjct: 150 HTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLN- 208

Query: 97  ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIF 156
           ++  L+V E     + V  L  H V+S  ++ K +  G+  R +  T  N  SSRSH+ F
Sbjct: 209 KKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACF 268

Query: 157 QIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFK-EGRNINLSLMTLGQVI 215
           QI L           +   + +LVDLAG+ER A T + + + + EG  IN SL+ L + I
Sbjct: 269 QIILRAKG-------RMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECI 321

Query: 216 TNLSDHSAVPPYRNSTLTYLLK 237
             L  + A  P+R S LT +L+
Sbjct: 322 RALGQNKAHTPFRESKLTQVLR 343

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+ATI+P  S  E +L TLRYA + + +
Sbjct: 355 MIATISPGISSCEYTLNTLRYADRVKEL 382

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373

 Score =  241 bits (618), Expect = 3e-79
 Identities = 77/208 (37%), Positives = 112/208 (53%), Gaps = 11/208 (5%)

Query: 41  FSMMGD-----NLDSSLKETTGIIPRFCHQLFDQIPSNMVA-QVKISYLEIYNEFVYDLL 94
            +M+G+               GIIPR    LFD++    V   ++ISYLE+YNE + DLL
Sbjct: 116 HTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLL 175

Query: 95  SSERKA---LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSR 151
           S++      +    +    + +  L    V S  ++ K L +G + R TA+T MN +SSR
Sbjct: 176 STDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSR 235

Query: 152 SHSIFQIQLTLTEDTGSSVTQ-KCSQINLVDLAGSERVAQT-KATEERFKEGRNINLSLM 209
           SH++F I + + E+        K  ++NLVDLAGSE V++       R +E  NIN SL+
Sbjct: 236 SHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLL 295

Query: 210 TLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           TLG+VIT L D +   PYR S LT LL+
Sbjct: 296 TLGRVITALVDRAPHVPYRESKLTRLLQ 323

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++ATI+P    IEE+L+TL YA +A+NI
Sbjct: 334 IIATISPGHKDIEETLSTLEYAHRAKNI 361

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410

 Score =  242 bits (621), Expect = 3e-79
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
            +M GD    S   + GI       +F         N+  +V +++ EIYN  V+DLL+ 
Sbjct: 170 HTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLN- 228

Query: 97  ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIF 156
           ++  L+V E     + V  L  + V+   ++ K ++ G+  R +  T  N  SSRSH+ F
Sbjct: 229 KKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACF 288

Query: 157 QIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFK-EGRNINLSLMTLGQVI 215
           QI L           +   + +LVDLAG+ER A T + + + + EG  IN SL+ L + I
Sbjct: 289 QILLRTKG-------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECI 341

Query: 216 TNLSDHSAVPPYRNSTLTYLLK 237
             L  + A  P+R S LT +L+
Sbjct: 342 RALGQNKAHTPFRESKLTQVLR 363

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTN 35
           M+A I+P  S  E +L TLRYA + + +      +
Sbjct: 375 MIAMISPGISSCEYTLNTLRYADRVKELSHHHHHH 409

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369

 Score =  239 bits (611), Expect = 3e-78
 Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 14/203 (6%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           F++ G +         G+ PR   +LF  +    +     +K   +E+Y + + DLL  +
Sbjct: 95  FTIYGAD------SNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPK 148

Query: 98  ---RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
              R  L +++     + V +++V  +S++ E++  +  G++ R T  T MN++SSRSH 
Sbjct: 149 QAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHL 208

Query: 155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQV 214
           I  + +  T     ++     +++ VDLAGSERV ++ +   + KE ++IN SL  LG V
Sbjct: 209 IVSVIIESTNLQTQAI--ARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDV 266

Query: 215 ITNLSDHSAVPPYRNSTLTYLLK 237
           I+ LS  +   PYRN  LT L+ 
Sbjct: 267 ISALSSGNQHIPYRNHKLTMLMS 289

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M   I+P +S+++E+  +L YA + R+I
Sbjct: 300 MFVNISPAESNLDETHNSLTYASRVRSI 327

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360

 Score =  233 bits (596), Expect = 4e-76
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 11/201 (5%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSE 97
           ++M+G        +T GI       +F  +     +    + IS+ EIY   +YDLL  +
Sbjct: 100 YTMLGSQPYGQ-SDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQ-K 157

Query: 98  RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQ 157
           RK +   E+    + V DL +  V +  E+   + +G   R     + ND+SSRSH+I  
Sbjct: 158 RKMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILN 217

Query: 158 IQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFK-EGRNINLSLMTLGQVIT 216
           I L               +I  +DLAGSER A T +  ++ + +G NIN SL+ L + I 
Sbjct: 218 IDLKDINK-----NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIR 272

Query: 217 NLSDHSAVPPYRNSTLTYLLK 237
            +       P+R+S LT +L+
Sbjct: 273 AMDSDKNHIPFRDSELTKVLR 293

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           M+A I+P  S  E++L TLRY+ + +N        +
Sbjct: 304 MIANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGK 339

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330

 Score =  231 bits (592), Expect = 6e-76
 Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 16/204 (7%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLS-- 95
           ++M G        E  GI  R    LF ++    S+    + +S  EIYNE + DLL   
Sbjct: 96  YTMEGT------AENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKE 149

Query: 96  -SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
             E+  +++       ++V  L+   V S  ++ K    G+  R T  TN+N+ SSRSH+
Sbjct: 150 PQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHA 209

Query: 155 IFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQ 213
           +  + +   +  TG    +   ++NLVDLAGSERV ++ A   R +E ++IN SL  LG 
Sbjct: 210 LLIVTVRGVDCSTGL---RTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGD 266

Query: 214 VITNLSDHSAVPPYRNSTLTYLLK 237
           VI  L       P+RNS LTYLL+
Sbjct: 267 VIAALRSRQGHVPFRNSKLTYLLQ 290

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 7/28 (25%), Positives = 20/28 (71%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+  ++P++ +  E+L +L++A + R++
Sbjct: 301 MVVQVSPVEKNTSETLYSLKFAERVRSV 328

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376

 Score =  230 bits (589), Expect = 8e-75
 Identities = 74/212 (34%), Positives = 105/212 (49%), Gaps = 19/212 (8%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           F+M G        +  G+IPR    LF                 SY+EIYNE V DLL++
Sbjct: 131 FTMEGGPGGDP--QLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLAT 188

Query: 97  ERKA-----LKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS 149
             +       ++R +      + V++     VS   E+   L    + RA A T  N++S
Sbjct: 189 GTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERS 248

Query: 150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKAT----EERFKEGRNIN 205
           SRSHS+FQ+Q++    +        + ++LVDLAGSER+    A      ER +E + IN
Sbjct: 249 SRSHSVFQLQISGEHSSRGLQCG--APLSLVDLAGSERLDPGLALGPGERERLRETQAIN 306

Query: 206 LSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
            SL TLG VI  LS+  +  PYRNS LTYLL+
Sbjct: 307 SSLSTLGLVIMALSNKESHVPYRNSKLTYLLQ 338

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349

 Score =  225 bits (577), Expect = 2e-73
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 29/216 (13%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           ++M+            G+IP     +F             +++  Y+EIYNE + DLL  
Sbjct: 101 YTMLNAG--------DGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRD 152

Query: 97  ERKALKV------------RESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTN 144
            +    +             +    G ++++++   ++S S++   L + +K R+TA+T 
Sbjct: 153 FKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATR 212

Query: 145 MNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNI 204
            N++SSRSHS+F + +          +Q   ++NLVDLAGSER+  +  T ER +E +NI
Sbjct: 213 SNERSSRSHSVFMVHINGRNLHTGETSQ--GKLNLVDLAGSERINSSAVTGERLRETQNI 270

Query: 205 NLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           N SL  LG VI  L+   A     P+RNS LTYLL+
Sbjct: 271 NKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQ 306

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M   I P  +HI E+L +LR+A +  + 
Sbjct: 317 MFVNIPPDPNHISETLNSLRFASKVNST 344

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347

 Score =  224 bits (572), Expect = 1e-72
 Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 27/214 (12%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           F+M+            GIIP     +F+ I          +V   ++EIYNE + DLL S
Sbjct: 100 FTMLNPG--------DGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRS 151

Query: 97  ERKA---------LKVRESPDT-GIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN 146
           +             ++R   +T    +++++   + S   ++  L + NK R+TAST  N
Sbjct: 152 DNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASN 211

Query: 147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINL 206
           + SS SHSIF I L+ +     + +     +NLVDLAGSER+  ++   +R +E +NIN 
Sbjct: 212 EHSSASHSIFIIHLSGSNAKTGAHSY--GTLNLVDLAGSERINVSQVVGDRLRETQNINK 269

Query: 207 SLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 270 SLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 303

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGT 34
           M   I+P  SHI E+L +LR+A +  +   ++ +
Sbjct: 314 MFVNISPSSSHINETLNSLRFASKVNST--RLVS 345

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403

 Score =  220 bits (562), Expect = 2e-70
 Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 27/214 (12%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           F+M+            GIIP     +F+ I          +V   ++EIYNE + DLL S
Sbjct: 156 FTMLNPG--------DGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRS 207

Query: 97  ERKA---------LKVRESPDT-GIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN 146
           +             ++R   +T    +++++   + S   ++  L + NK R+TAST  N
Sbjct: 208 DNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASN 267

Query: 147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINL 206
           + SSRSHSIF I L+ +     + +     +NLVDLAGSER+  ++   +R +E +NIN 
Sbjct: 268 EHSSRSHSIFIIHLSGSNAKTGAHSY--GTLNLVDLAGSERINVSQVVGDRLRETQNINK 325

Query: 207 SLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 326 SLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 359

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGT 34
           M   I+P  SHI E+L +LR+A +  +   ++ +
Sbjct: 370 MFVNISPSSSHINETLNSLRFASKVNST--RLVS 401

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412

 Score =  220 bits (562), Expect = 2e-70
 Identities = 74/203 (36%), Positives = 108/203 (53%), Gaps = 18/203 (8%)

Query: 41  FSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLSS 96
           ++M G        E+ G+IPR    LFD I          ++K ++LEIYNE +YDLLS+
Sbjct: 154 YTMDGVP------ESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSN 207

Query: 97  ERKALKVR--ESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
           E+K +++R  ++    I+VS+++   V   + ++  +      RATAST  N++SSRSH+
Sbjct: 208 EQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHA 267

Query: 155 IFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQV 214
           + +++L         +      INLVDLAGSE       T  R  E +NIN SL  L  V
Sbjct: 268 VTKLELIGRHAEKQEI--SVGSINLVDLAGSESP----KTSTRMTETKNINRSLSELTNV 321

Query: 215 ITNLSDHSAVPPYRNSTLTYLLK 237
           I  L       PYRNS LT+LL 
Sbjct: 322 ILALLQKQDHIPYRNSKLTHLLM 344

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGT 34
           M   ++P Q   +ES+ +LR+A    +   K+  
Sbjct: 355 MFINVSPFQDCFQESVKSLRFAASVNSC--KMTK 386

>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 203 NINLSLMTLGQVITNLSDHSAV-PPYRNSTLTYLLK 237
           NIN SL  LG VI+ L++ +    PYR+S +T +L+
Sbjct: 3   NINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQ 38

>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 1  MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
          ++   +P   +  E+ +TL +  +A+ I   +  N 
Sbjct: 49 IVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 84

>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 205 NLSLMTLGQVITNLSDHSAV-PPYRNSTLTYLLK 237
           N SL  LG VI+ L++ +    PYR+S +T +L+
Sbjct: 1   NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQ 34

>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 1  MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
          ++   +P   +  E+ +TL +  +A+ I   +  N 
Sbjct: 45 IVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 4e-04
 Identities = 31/261 (11%), Positives = 71/261 (27%), Gaps = 96/261 (36%)

Query: 11  HIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQI 70
            +++           ++I     + E + H  M  D +  +L+            LF  +
Sbjct: 37  DVQDMP---------KSIL----SKEEIDHIIMSKDAVSGTLR------------LFWTL 71

Query: 71  ---PSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSV--HGVSSFS 125
                 MV +     L I  +F+   + +E++      S  T +++       +    F+
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ----PSMMTRMYIEQRDRLYNDNQVFA 127

Query: 126 EMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTED-------------TGSSVTQ 172
           +                        R     +++  L E              +G +   
Sbjct: 128 KYNVS--------------------RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW-- 165

Query: 173 KCSQINLVDLAGSERVAQTKATEERFKEG----------------RNINLSLMTLGQVIT 216
                    +A    V  +   + +                      +   L  +    T
Sbjct: 166 ---------VALD--VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 217 NLSDHSAVPPYRNSTLTYLLK 237
           + SDHS+    R  ++   L+
Sbjct: 215 SRSDHSSNIKLRIHSIQAELR 235

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	100.0
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	100.0
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	100.0
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	100.0
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	100.0
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	100.0
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	100.0
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	100.0
4a14_A	344	Kinesin, kinesin-like protein KIF7; motor protein,	100.0
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	100.0
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	100.0
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	100.0
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	100.0
2nr8_A	358	Kinesin-like protein KIF9; motor domain, ADP, stru	100.0
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	100.0
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	100.0
3nwn_A	359	Kinesin-like protein KIF9; motor domain, ADP, stru	100.0
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	100.0
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	100.0
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	100.0
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	100.0
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	100.0
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	100.0
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	100.0
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	100.0
3u06_A	412	Protein claret segregational; motor domain, stalk	100.0
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	100.0
4h1g_A	715	Maltose binding protein-cakar3 motor domain fusio;	100.0
2kin_B	100	Kinesin; motor protein, cytoskeleton; HET: ADP; 2.	99.34
2o0a_A	298	S.cerevisiae chromosome XVI reading frame ORF YPL2	99.2
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	97.42
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	97.41
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	97.38
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	97.37
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	97.37
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	97.36
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	97.29
4h1g_A	715	Maltose binding protein-cakar3 motor domain fusio;	96.9

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}

Probab=100.00  E-value=6.9e-62  Score=418.98  Aligned_cols=225  Identities=37%  Similarity=0.529  Sum_probs=175.4

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|...+.+  +|+..++|+++++           |++||||||||+|+.      +++|||||++++||+.+++
T Consensus        57 ~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~------~~~Giipr~~~~lF~~i~~  130 (350)
T 2vvg_A           57 TFTFDAVYDQTSCNYGIFQASFKPLIDAVLEGFNSTIFAYGQTGAGKTWTMGGNK------EEPGAIPNSFKHLFDAINS  130 (350)
T ss_dssp             EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHHHT
T ss_pred             EeeCCEEECCCcchhHHHHHHHHHHHHHHhCCCceeEEeecCCCCCCCEEeecCC------ccCchHHHHHHHHHHHHHh
Confidence            35788999666654  9999999977765           666666666666665      7899999999999998853


Q ss_pred             ---CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         73 ---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        73 ---~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                         .+.|.|++||+|||||+|+|||++ ...+.+++++.+++++.|++++.|.+++|++++|..|.++|+..+|.+|..|
T Consensus       131 ~~~~~~~~v~vS~~EIYnE~i~DLL~~-~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~S  209 (350)
T 2vvg_A          131 SSSNQNFLVIGSYLELYNEEIRDLIKN-NTKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTS  209 (350)
T ss_dssp             CCTTEEEEEEEEEEEEETTEEEETTTT-EEEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------C
T ss_pred             hccCCcEEEEEEEEEEeCCEEEEcccC-CcCceeeEcCCCCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCC
Confidence               478999999999999999999985 5679999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRN  229 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrd  229 (237)
                      ||||+||+|+|.+.+...+......|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|++++.||||||
T Consensus       210 SRSH~if~i~v~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRd  289 (350)
T 2vvg_A          210 SRSHSIFMVRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRD  289 (350)
T ss_dssp             TTCEEEEEEEEEEEEC----CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGG
T ss_pred             CcceEEEEEEEEEeeccCCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccc
Confidence            99999999999988754444446789999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhcC
Q psy17371        230 STLTYLLK  237 (237)
Q Consensus       230 SkLT~lLq  237 (237)
                      ||||+|||
T Consensus       290 SkLT~lLq  297 (350)
T 2vvg_A          290 SKLTRLLQ  297 (350)
T ss_dssp             CHHHHHTT
T ss_pred             cHHHHHHH
Confidence            99999997

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.4e-61  Score=420.71  Aligned_cols=225  Identities=32%  Similarity=0.453  Sum_probs=177.8

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|...+.+  +|+..++|+++++           |++||||||||+|+.      +++|||||++++||+.+++
T Consensus        66 ~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTM~G~~------~~~Giipra~~~lF~~i~~  139 (388)
T 3bfn_A           66 KYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSP------EQPGVIPRALMDLLQLTRE  139 (388)
T ss_dssp             EEECSEEECTTCCHHHHHHHHTGGGHHHHTTTCCEEEEEESCTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHHHH
T ss_pred             EEEcceEecCCCCHhHHHHHHHHHHHHHhhcCceeeEeeecCCCCCCCeEeecCc------cccchhHHHHHHHHHHHHH
Confidence            45789999765544  9999999987765           666666666666665      7899999999999987743


Q ss_pred             ------CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         73 ------NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        73 ------~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                            .+.|.|++||+|||||+|+|||++....+.+++++.+++++.|++++.|.|++|++++|..|.++|..++|.+|
T Consensus       140 ~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N  219 (388)
T 3bfn_A          140 EGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLN  219 (388)
T ss_dssp             HTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC----------
T ss_pred             hhccCCCceEEEEEEEEEEECCeeeehhccCCCCceEEEcCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCC
Confidence                  37899999999999999999999988889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCC
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPP  226 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vp  226 (237)
                      ..|||||+||+|+|.+........ ...|+|+||||||+||..++++.|.+++|+..||+||++|++||.+|+++++|||
T Consensus       220 ~~SSRSH~If~i~v~~~~~~~~~~-~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVP  298 (388)
T 3bfn_A          220 QRSSRSHAVLLVKVDQRERLAPFR-QREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVP  298 (388)
T ss_dssp             -CGGGSEEEEEEEEEEEESSTTCC-EEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCC
T ss_pred             CCCCCCeEEEEEEEEEeccCCCCc-eeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCCCCCc
Confidence            999999999999999877433322 5689999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhhhcC
Q psy17371        227 YRNSTLTYLLK  237 (237)
Q Consensus       227 yrdSkLT~lLq  237 (237)
                      |||||||+|||
T Consensus       299 YRdSkLTrlLq  309 (388)
T 3bfn_A          299 YRDSKLTRLLQ  309 (388)
T ss_dssp             GGGSHHHHHTT
T ss_pred             CcccHHHHHHH
Confidence            99999999997

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*

Probab=100.00  E-value=4.6e-62  Score=416.87  Aligned_cols=226  Identities=35%  Similarity=0.486  Sum_probs=202.6

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC--
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP--   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~--   71 (237)
                      .+||++|...+.+  +|+..++|+++++           |++||||||||+|+..+.   +++|||||++++||+.+.  
T Consensus        46 f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~---~~~Giipr~~~~lF~~i~~~  122 (325)
T 1bg2_A           46 YAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDP---EGMGIIPRIVQDIFNYIYSM  122 (325)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCT---TTBCHHHHHHHHHHHHHHHH
T ss_pred             EECCeEeCCCCCHHHHHHHHhhhhHHHHhCCCeEEEEEECCCCCCCceEecccCCCc---ccCccHHHHHHHHHHHHHhc
Confidence            4688999766655  9999888877764           777777777777764322   567999999999998874  


Q ss_pred             -CCceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCC
Q psy17371         72 -SNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS  150 (237)
Q Consensus        72 -~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ss  150 (237)
                       +.++|.|++||+|||||+|+|||++.+..+.+++++.++++++|++++.|.|++|++++|..|.++|+..+|.+|..||
T Consensus       123 ~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SS  202 (325)
T 1bg2_A          123 DENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSS  202 (325)
T ss_dssp             CSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEECTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHH
T ss_pred             cCCceEEEEEEEEEEecCeeeecccCCCCCceEEECCCCCEEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCC
Confidence             4589999999999999999999999888999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCCc
Q psy17371        151 RSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNS  230 (237)
Q Consensus       151 rsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrdS  230 (237)
                      |||+||+|++.+.+.....  ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|+++++|||||||
T Consensus       203 RSH~if~i~v~~~~~~~~~--~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdS  280 (325)
T 1bg2_A          203 RSHSIFLINVKQENTQTEQ--KLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDS  280 (325)
T ss_dssp             HSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGS
T ss_pred             CCeEEEEEEEEEEecCCCc--EEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCCccccc
Confidence            9999999999988754332  56899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcC
Q psy17371        231 TLTYLLK  237 (237)
Q Consensus       231 kLT~lLq  237 (237)
                      |||+|||
T Consensus       281 kLT~lLq  287 (325)
T 1bg2_A          281 KMTRILQ  287 (325)
T ss_dssp             HHHHHGG
T ss_pred             HHHHHHH
Confidence            9999997

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0

Probab=100.00  E-value=6.1e-61  Score=414.45  Aligned_cols=224  Identities=35%  Similarity=0.536  Sum_probs=174.2

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC--
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP--   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~--   71 (237)
                      .+||++|...+.+  +|+..++|+++++           |++||||||||+|+.      +++|||||++++||+.++  
T Consensus        74 F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~------~~~Giipr~~~~lf~~i~~~  147 (355)
T 3lre_A           74 FVFDAVFDETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSA------DEPGVMYLTMLHLYKCMDEI  147 (355)
T ss_dssp             EECSEEECTTCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHHHHT
T ss_pred             EEeceEECCCCChHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCceeeeccCC------CCCCeeehhhhHHHHhhhhh
Confidence            5689999776655  9999999977655           666666666666665      789999999999998774  


Q ss_pred             -CCceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCC
Q psy17371         72 -SNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS  150 (237)
Q Consensus        72 -~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ss  150 (237)
                       +...+.|.+||+|||||+|+|||++ ..++.+++++.+++++.|++++.|.|++|++++|..|.++|+..+|.+|..||
T Consensus       148 ~~~~~~~v~vS~~EIYnE~i~DLL~~-~~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SS  226 (355)
T 3lre_A          148 KEEKICSTAVSYLEVYNEQIRDLLVN-SGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSS  226 (355)
T ss_dssp             TTTEEEEEEEEEEEEETTEEEESSSC-CCCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCT
T ss_pred             ccCceEEEEEEEEEEECCEEEECcCC-CCCceeEEcCCCCEEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCCCC
Confidence             3478999999999999999999987 56799999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEEEEecC-CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCCC
Q psy17371        151 RSHSIFQIQLTLTEDT-GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS---AVPP  226 (237)
Q Consensus       151 rsH~v~~i~v~~~~~~-~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~---~~vp  226 (237)
                      |||+||+|++.+.+.. ........|+|+||||||+||..++++.|.+++|+..||+||++|++||.||++++   .|||
T Consensus       227 RSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiP  306 (355)
T 3lre_A          227 RSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIP  306 (355)
T ss_dssp             TCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CC
T ss_pred             CCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCC
Confidence            9999999999998732 22233567999999999999999999999999999999999999999999999865   4999


Q ss_pred             CCCchhhhhcC
Q psy17371        227 YRNSTLTYLLK  237 (237)
Q Consensus       227 yrdSkLT~lLq  237 (237)
                      |||||||||||
T Consensus       307 yRdSkLT~lL~  317 (355)
T 3lre_A          307 YRNSKLTRLLK  317 (355)
T ss_dssp             GGGSHHHHHTT
T ss_pred             cccCHHHHHHH
Confidence            99999999997

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}

Probab=100.00  E-value=2.1e-60  Score=407.41  Aligned_cols=222  Identities=31%  Similarity=0.463  Sum_probs=186.3

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhh-----------cCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC-
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEK-----------IGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-   72 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~-----------~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~-   72 (237)
                      .+||++|...+.+  +|+. ++|++++           ||++||||||||+|+.      +++|||||++++||+.+++ 
T Consensus        50 f~FD~Vf~~~~~Q~~Vy~~-v~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~------~~~Giipr~~~~lF~~i~~~  122 (330)
T 2h58_A           50 FELDKVFSPQASQQDVFQE-VQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTA------ENPGINQRALQLLFSEVQEK  122 (330)
T ss_dssp             EECSEEECTTCCHHHHHTT-THHHHHHHHTTCCEEEEEESSTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHHHTS
T ss_pred             EecCeEeCCCCCcHhHHHH-HHHHHHHHhCCCEEEEEeECCCCCCCcEEEecCC------CCCcHHHHHHHHHHHhhhcc
Confidence            3567777544433  6765 3565544           3777777777777776      7899999999999998854 


Q ss_pred             --CceEEEEEEEEEEeccccccccccc-ccccee--eecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         73 --NMVAQVKISYLEIYNEFVYDLLSSE-RKALKV--RESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        73 --~~~~~v~vS~~EIy~e~v~DLL~~~-~~~~~i--~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                        .+.|.|++||+|||||+|+|||++. ...+.+  .+++.++++++|++++.|.|++|++++|..|.++|...+|.+|.
T Consensus       123 ~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~  202 (330)
T 2h58_A          123 ASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNE  202 (330)
T ss_dssp             CTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECTTSSCCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCS
T ss_pred             cCCceEEEEEEEEEEECCChhhcccccccccceEEEeecCCCCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCC
Confidence              3789999999999999999999865 233444  46788999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      .|||||+||+|++.+.+...+.  ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|+++++||||
T Consensus       203 ~SSRSH~if~i~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~hvPy  280 (330)
T 2h58_A          203 HSSRSHALLIVTVRGVDCSTGL--RTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPF  280 (330)
T ss_dssp             CGGGSEEEEEEEEEEEETTTTE--EEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCG
T ss_pred             CcCCccEEEEEEEEEEecCCCc--EEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHHHHHHHhcCCCCCcc
Confidence            9999999999999987744332  57899999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       281 RdSkLT~lL~  290 (330)
T 2h58_A          281 RNSKLTYLLQ  290 (330)
T ss_dssp             GGSHHHHHTH
T ss_pred             cccHHHHHHH
Confidence            9999999996

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}

Probab=100.00  E-value=3.3e-61  Score=414.89  Aligned_cols=226  Identities=39%  Similarity=0.555  Sum_probs=191.8

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|.....+  +|+..++|+++++           |++||||||||+|+.      +++|||||++++||+.+++
T Consensus        45 ~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~------~~~Giipr~~~~lF~~i~~  118 (349)
T 1t5c_A           45 SFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSE------DHLGVIPRAIHDIFQKIKK  118 (349)
T ss_dssp             EEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHGGG
T ss_pred             EEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCccceeeecCCCCCCCeEEecCC------CCCchHHHHHHHHHHHHHh
Confidence            45789999766554  9999999877755           566666666666655      7899999999999999875


Q ss_pred             C--ceEEEEEEEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCC
Q psy17371         73 N--MVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDK  148 (237)
Q Consensus        73 ~--~~~~v~vS~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~  148 (237)
                      .  ..|.|++||+|||||+|+|||++.  .+++.+++++.+++++.|++++.|.+++|++++|..|.++|...+|.+|..
T Consensus       119 ~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~  198 (349)
T 1t5c_A          119 FPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQR  198 (349)
T ss_dssp             CTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCT
T ss_pred             CcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECCCCCEEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCC
Confidence            4  789999999999999999999875  467999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEEEEEEecCCC---ceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC--C
Q psy17371        149 SSRSHSIFQIQLTLTEDTGS---SVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS--A  223 (237)
Q Consensus       149 ssrsH~v~~i~v~~~~~~~~---~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~--~  223 (237)
                      |||||+||+|.+.+......   ......|+|+|||||||||..+++..|.+++|+..||+||++|++||.+|++++  .
T Consensus       199 SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~  278 (349)
T 1t5c_A          199 SSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGG  278 (349)
T ss_dssp             TTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTT
T ss_pred             CCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHHHHHHHHHHHHhccCCCC
Confidence            99999999999998763321   223568999999999999999999999999999999999999999999999876  5


Q ss_pred             CCCCCCchhhhhcC
Q psy17371        224 VPPYRNSTLTYLLK  237 (237)
Q Consensus       224 ~vpyrdSkLT~lLq  237 (237)
                      ||||||||||||||
T Consensus       279 hvPyRdSkLT~lLq  292 (349)
T 1t5c_A          279 FINYRDSKLTRILQ  292 (349)
T ss_dssp             SSCGGGSHHHHHTG
T ss_pred             CCcccccHHHHHHH
Confidence            99999999999997

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*

Probab=100.00  E-value=1.5e-60  Score=412.92  Aligned_cols=222  Identities=28%  Similarity=0.458  Sum_probs=196.9

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      .+||++|...+.+  +|+. ++++++++           |++||||||||+|+.      +++|||||++++||+.+++.
T Consensus        49 f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~------~~~Giipr~~~~lF~~i~~~  121 (369)
T 3cob_A           49 HMYDRVFDGNATQDDVFED-TKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAD------SNPGLTPRAMSELFRIMKKD  121 (369)
T ss_dssp             EECSEEECTTCCHHHHHHT-TTHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHHHHT
T ss_pred             EecCEEECCCCCcceehhh-hhhhhHhhhcCCceEEEEECCCCCCCeEeecCCC------CCCchhHHHHHHHHHHHHhh
Confidence            4678888655544  8877 56766554           666666666666665      78999999999999988543


Q ss_pred             ---ceEEEEEEEEEEeccccccccccc---cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         74 ---MVAQVKISYLEIYNEFVYDLLSSE---RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        74 ---~~~~v~vS~~EIy~e~v~DLL~~~---~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                         +.|.|++||+|||||+|+|||++.   ...+.+++++.+++++.|++++.|.|++|++++|..|.++|+..+|.+|.
T Consensus       122 ~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~  201 (369)
T 3cob_A          122 SNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNE  201 (369)
T ss_dssp             TTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTC
T ss_pred             ccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEECCCCCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCC
Confidence               689999999999999999999875   46799999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      .|||||+||+|++.+.+.....  ...|+|+||||||+||..++++.|.+++|+..||+||++|++||.+|+++++||||
T Consensus       202 ~SSRSH~if~i~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPy  279 (369)
T 3cob_A          202 QSSRSHLIVSVIIESTNLQTQA--IARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPY  279 (369)
T ss_dssp             HHHHSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred             CCCcceEEEEEEEEEecCCCCc--EEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCC
Confidence            9999999999999988754332  56899999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       280 RdSkLT~lLq  289 (369)
T 3cob_A          280 RNHKLTMLMS  289 (369)
T ss_dssp             GGCHHHHHTT
T ss_pred             cCCHHHHHHH
Confidence            9999999997

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*

Probab=100.00  E-value=6.4e-61  Score=415.05  Aligned_cols=226  Identities=35%  Similarity=0.477  Sum_probs=184.9

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC--
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP--   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~--   71 (237)
                      .+||++|...+.+  +|+..++|+++++           |++||||||||+|+..+.   .++|||||++++||+.+.  
T Consensus        53 f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~---~~~Giipr~~~~lF~~i~~~  129 (365)
T 2y65_A           53 YLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDS---VKQGIIPRIVNDIFNHIYAM  129 (365)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCT---TTBCHHHHHHHHHHHHHHHC
T ss_pred             EeCceEecCCCCHHHHHHHhhhhHHHHHhCCCceEEEeecCCCCCCceEEecCCCCc---ccCChHHHHHHHHHHHHHhc
Confidence            5688999766555  9999998877655           666666666666654222   568999999999998874  


Q ss_pred             -CCceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCC
Q psy17371         72 -SNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS  150 (237)
Q Consensus        72 -~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ss  150 (237)
                       ..++|.|++||+|||||+|+|||++.+..+.+++++.+++++.|++++.|.|++|++++|..|.++|..++|.+|..||
T Consensus       130 ~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SS  209 (365)
T 2y65_A          130 EVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSS  209 (365)
T ss_dssp             CSCEEEEEEEEEEEEETTEEEETTCTTCCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred             cCCceEEEEEEEEEEECCeeeecccCCcCCceEEECCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCC
Confidence             4578999999999999999999999888999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCCC
Q psy17371        151 RSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYRN  229 (237)
Q Consensus       151 rsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyrd  229 (237)
                      |||+||+|++.+.+.....  ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|++++ .||||||
T Consensus       210 RSH~if~i~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRd  287 (365)
T 2y65_A          210 RSHSVFLINVKQENLENQK--KLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRD  287 (365)
T ss_dssp             TSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGG
T ss_pred             CceEEEEEEEEEEecCCCC--EeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Confidence            9999999999988744333  468999999999999999999999999999999999999999999999875 6999999


Q ss_pred             chhhhhcC
Q psy17371        230 STLTYLLK  237 (237)
Q Consensus       230 SkLT~lLq  237 (237)
                      ||||+|||
T Consensus       288 SkLT~lLq  295 (365)
T 2y65_A          288 SKLTRILQ  295 (365)
T ss_dssp             CHHHHHTG
T ss_pred             CHHHHHHH
Confidence            99999997

>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*

Probab=100.00  E-value=5.3e-61  Score=413.81  Aligned_cols=231  Identities=33%  Similarity=0.456  Sum_probs=176.6

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      .+||++|...+.+  +|+..++|+++++           |++||||||||.|........+++|||||++++||+.+++.
T Consensus        52 f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~  131 (344)
T 4a14_A           52 FGFHVVLAEDAGQEAVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDEN  131 (344)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEEecCcchhHHHHHHHHHHHHHHHhhcCeeEEEecccCCCceEeecccchhhhhhcccCCchHHHHHHHHhcccc
Confidence            4788999766655  9999999877655           66666666666665432222467999999999999988654


Q ss_pred             --ceEEEEEEEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         74 --MVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        74 --~~~~v~vS~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                        +++.|++||+|||||+|+|||++.  .+.+.+++++.+++++.|++++.|.+++|++++|..|.++|...+|.+|..|
T Consensus       132 ~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~S  211 (344)
T 4a14_A          132 DLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLS  211 (344)
T ss_dssp             TTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEECTTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCG
T ss_pred             cceeeEEEEehhhhhHHHHHHHHHhccccccceeeeccCCCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcc
Confidence              789999999999999999999854  5779999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecC------CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-
Q psy17371        150 SRSHSIFQIQLTLTEDT------GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-  222 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~------~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-  222 (237)
                      ||||+||+|+|.+....      ........|+|+||||||+||..+++..+.+++|+..||+||++|++||.+|++++ 
T Consensus       212 SRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~  291 (344)
T 4a14_A          212 SRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQR  291 (344)
T ss_dssp             GGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTT
T ss_pred             cccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcccCCchhhhhhheeechhHHhhhhHHHhcCCccc
Confidence            99999999999987521      12223567999999999999999999999999999999999999999999998754 


Q ss_pred             --CCCCCCCchhhhhcC
Q psy17371        223 --AVPPYRNSTLTYLLK  237 (237)
Q Consensus       223 --~~vpyrdSkLT~lLq  237 (237)
                        .||||||||||||||
T Consensus       292 ~~~hvPyRdSkLT~lLq  308 (344)
T 4a14_A          292 RGSHIPYRDSKITRILK  308 (344)
T ss_dssp             TTSCCCGGGCHHHHHTT
T ss_pred             cCCCCCcchhhHHHHhH
Confidence              499999999999997

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9

Probab=100.00  E-value=1.2e-60  Score=412.47  Aligned_cols=225  Identities=43%  Similarity=0.649  Sum_probs=171.4

Q ss_pred             cccchhhh----------hhhhHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHH
Q psy17371          7 PLQSHIEE----------SLATLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQ   65 (237)
Q Consensus         7 ~~~~~~~~----------~~~~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~   65 (237)
                      .+||++|.          +.+..+|+..++|+++++           |++||||||||+|+.      +++|||||++++
T Consensus        53 F~FD~vF~~~d~~~~~~~a~Q~~vy~~~~~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~------~~~Giipr~~~~  126 (354)
T 3gbj_A           53 FAYDHCFWSMDESVKEKYAGQDIVFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTMMGTA------DQPGLIPRLCSG  126 (354)
T ss_dssp             EECSEEEECSCTTCTTTBCCHHHHHHHHHHHHHHHHHTTCCEEEEEEECTTSSHHHHHTBCS------SSBCHHHHHHHH
T ss_pred             EEeeEEeccCccccccccccHHHHHHHhhHHHHHHHhCCceeEEEeeCCCCCCCceEEecCC------CCCchhhHHHHH
Confidence            46788882          223449999998877655           666666666666655      789999999999


Q ss_pred             hhccCC----CCceEEEEEEEEEEeccccccccccc--cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCc
Q psy17371         66 LFDQIP----SNMVAQVKISYLEIYNEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARA  139 (237)
Q Consensus        66 Lf~~~~----~~~~~~v~vS~~EIy~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~  139 (237)
                      ||+.+.    ..+.|.|.+||+|||||+|+|||++.  ...+.+++++..+++++|++++.|.+++|++++|..|.++|.
T Consensus       127 lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~  206 (354)
T 3gbj_A          127 LFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRT  206 (354)
T ss_dssp             HHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC------CCBTTCCCEEECSHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEEcCCCCEEEEeeEEEecCCHHHHHHHHHHHHhcCC
Confidence            998774    34789999999999999999999875  467999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCceEEEEEEEEEEe--cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHH
Q psy17371        140 TASTNMNDKSSRSHSIFQIQLTLTE--DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITN  217 (237)
Q Consensus       140 ~~~~~~n~~ssrsH~v~~i~v~~~~--~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~a  217 (237)
                      .++|.+|..|||||+||+|++.+..  ..........|+|+||||||+||..+++..|.+++|+..||+||++|++||.+
T Consensus       207 ~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~a  286 (354)
T 3gbj_A          207 VAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISA  286 (354)
T ss_dssp             ---------CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHH
T ss_pred             eeecCCCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHH
Confidence            9999999999999999999999864  23334446789999999999999999999999999999999999999999999


Q ss_pred             hhc------CCCCCCCCCchhhhhcC
Q psy17371        218 LSD------HSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       218 L~~------~~~~vpyrdSkLT~lLq  237 (237)
                      |++      +++||||||||||+|||
T Consensus       287 L~~~~~~~~~~~hvPyRdSkLT~lLq  312 (354)
T 3gbj_A          287 LADQSAGKNKNKFVPYRDSVLTWLLK  312 (354)
T ss_dssp             HHHC------CCCCCGGGSHHHHHTH
T ss_pred             HHhhhcccCCCCcccccccHHHHHHH
Confidence            986      34699999999999996

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*

Probab=100.00  E-value=3.9e-61  Score=416.63  Aligned_cols=232  Identities=39%  Similarity=0.574  Sum_probs=187.6

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC------CCCccccchhHHHhhccCCC--C
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL------KETTGIIPRFCHQLFDQIPS--N   73 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~------~~~~Gii~r~~~~Lf~~~~~--~   73 (237)
                      ..+||++|...+.+  +|+..++|+++++  |+|+|+++||++|+||++++      .+++|||||++++||+.+++  .
T Consensus        69 ~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~~~  148 (372)
T 3b6u_A           69 TFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQN  148 (372)
T ss_dssp             EEECSEEECTTCCHHHHHHHTHHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTCSS
T ss_pred             EEEcCeEeCCcCchHHHHHHHHHHHHHHHhCCCeeeEEeecCCCCCCCEeEecCCCCcccCCcHHHHHHHHHHHhhhccC
Confidence            35789999655544  9999999987765  44444444444444444443      25689999999999998854  4


Q ss_pred             ceEEEEEEEEEEeccccccccccc-cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCc
Q psy17371         74 MVAQVKISYLEIYNEFVYDLLSSE-RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRS  152 (237)
Q Consensus        74 ~~~~v~vS~~EIy~e~v~DLL~~~-~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrs  152 (237)
                      +.|.|++||+|||||+|+|||++. ...+.+++++.+++++.|++++.|.|++|++++|..|.++|..++|.+|..||||
T Consensus       149 ~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRS  228 (372)
T 3b6u_A          149 QQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRS  228 (372)
T ss_dssp             CEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTS
T ss_pred             CceEEEEEEEEEeCCEEEECCCCCCCCCceEEECCCCcEecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcc
Confidence            889999999999999999999876 5679999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEEEEEec-CCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCCCc
Q psy17371        153 HSIFQIQLTLTED-TGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYRNS  230 (237)
Q Consensus       153 H~v~~i~v~~~~~-~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyrdS  230 (237)
                      |+||+|+|.+... ..+......|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|++++ .|||||||
T Consensus       229 H~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdS  308 (372)
T 3b6u_A          229 HAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDS  308 (372)
T ss_dssp             EEEEEEEEEEEC-----CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGS
T ss_pred             eEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHHhcCCCCCCccccc
Confidence            9999999998763 222233578999999999999999999999999999999999999999999999876 59999999


Q ss_pred             hhhhhcC
Q psy17371        231 TLTYLLK  237 (237)
Q Consensus       231 kLT~lLq  237 (237)
                      |||+|||
T Consensus       309 kLT~lLq  315 (372)
T 3b6u_A          309 KLTRLLQ  315 (372)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            9999997

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}

Probab=100.00  E-value=4.3e-60  Score=418.84  Aligned_cols=226  Identities=43%  Similarity=0.646  Sum_probs=179.6

Q ss_pred             Ccccchhhh---------hhhhHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHH
Q psy17371          6 NPLQSHIEE---------SLATLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQ   65 (237)
Q Consensus         6 ~~~~~~~~~---------~~~~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~   65 (237)
                      ..+||++|.         +.+..+|+..++|+++++           |++||||||||+|+.      +++|||||++++
T Consensus        97 ~F~FD~vF~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~------~~~GIipr~~~~  170 (443)
T 2owm_A           97 SFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTP------DQPGLIPRTCED  170 (443)
T ss_dssp             EEECSEEEEESCTTSTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCT------TSCCHHHHHHHH
T ss_pred             eEecCeEeCCCCcCCccCCCHHHHHHhhhhhHHHHhhcCCceEEEEeCCCCCCCCEEeecCC------CCCchHHHHHHH
Confidence            356888884         334459999988877654           666666666666655      789999999999


Q ss_pred             hhccCCC------CceEEEEEEEEEEeccccccccccc-----cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHH
Q psy17371         66 LFDQIPS------NMVAQVKISYLEIYNEFVYDLLSSE-----RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEG  134 (237)
Q Consensus        66 Lf~~~~~------~~~~~v~vS~~EIy~e~v~DLL~~~-----~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~  134 (237)
                      ||+.+++      .+.|.|++||+|||||+|+|||++.     ...+.+++++.+++++.|++++.|.+++|++++|..|
T Consensus       171 lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G  250 (443)
T 2owm_A          171 LFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIG  250 (443)
T ss_dssp             HHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHH
T ss_pred             HHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccccceeECCCCCEeccCCEEEEcCCHHHHHHHHHHH
Confidence            9988743      3789999999999999999999873     3459999999999999999999999999999999999


Q ss_pred             HhhCccccCCCCCCCCCceEEEEEEEEEEec--CCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHH
Q psy17371        135 NKARATASTNMNDKSSRSHSIFQIQLTLTED--TGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG  212 (237)
Q Consensus       135 ~~~R~~~~~~~n~~ssrsH~v~~i~v~~~~~--~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~  212 (237)
                      .++|...+|.+|..|||||+||+|+|.+...  .........|+|+||||||+||..+++..|.+++|+..||+||++|+
T Consensus       251 ~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg  330 (443)
T 2owm_A          251 DGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLG  330 (443)
T ss_dssp             HTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHH
T ss_pred             HhhCCcccCcCCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHH
Confidence            9999999999999999999999999998652  22223356899999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCC----------------------CCCCCCCchhhhhcC
Q psy17371        213 QVITNLSDHS----------------------AVPPYRNSTLTYLLK  237 (237)
Q Consensus       213 ~vi~aL~~~~----------------------~~vpyrdSkLT~lLq  237 (237)
                      +||.+|++++                      .||||||||||||||
T Consensus       331 ~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLq  377 (443)
T 2owm_A          331 RVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLK  377 (443)
T ss_dssp             HHHHHHCC-------------------------CCCGGGSHHHHHST
T ss_pred             HHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHH
Confidence            9999998753                      389999999999997

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*

Probab=100.00  E-value=1.4e-59  Score=407.50  Aligned_cols=227  Identities=42%  Similarity=0.624  Sum_probs=187.5

Q ss_pred             cccchhhhhh----------hhHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHH
Q psy17371          7 PLQSHIEESL----------ATLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQ   65 (237)
Q Consensus         7 ~~~~~~~~~~----------~~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~   65 (237)
                      .+||++|...          +..+|+..++|+++++           |++||||||||+|+..    .+++|||||++++
T Consensus        50 f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~----~~~~Giipr~~~~  125 (366)
T 2zfi_A           50 FSFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE----KDQQGIIPQLCED  125 (366)
T ss_dssp             EECSEEEECSSCTTSSSCCCHHHHHHHTHHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSG----GGCBCHHHHHHHH
T ss_pred             EecceEeecCccccccccCcHHHHHHHHHHHHHHHHhcCCeeEEEEeCCCCCCCceEeeCCCc----cCCCccHHHHHHH
Confidence            4678888533          3448988888877655           5555555555555531    2568999999999


Q ss_pred             hhccCCC----CceEEEEEEEEEEeccccccccccc-cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCcc
Q psy17371         66 LFDQIPS----NMVAQVKISYLEIYNEFVYDLLSSE-RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARAT  140 (237)
Q Consensus        66 Lf~~~~~----~~~~~v~vS~~EIy~e~v~DLL~~~-~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~  140 (237)
                      ||+.+++    .+.|.|++||+|||||+|+|||++. ...+.+++++..+++++|++++.|.|++|++++|..|.++|..
T Consensus       126 lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~  205 (366)
T 2zfi_A          126 LFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTV  205 (366)
T ss_dssp             HHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccCCCceEEEcCCCCEEEeCCEEEEECCHHHHHHHHHHHhhcccc
Confidence            9998854    3789999999999999999999986 4679999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCceEEEEEEEEEEecC--CCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHh
Q psy17371        141 ASTNMNDKSSRSHSIFQIQLTLTEDT--GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNL  218 (237)
Q Consensus       141 ~~~~~n~~ssrsH~v~~i~v~~~~~~--~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL  218 (237)
                      ++|.+|..|||||+||+|+|.+....  ........|+|+||||||+||..++++.|.+++|+..||+||++|++||.+|
T Consensus       206 ~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL  285 (366)
T 2zfi_A          206 AATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISAL  285 (366)
T ss_dssp             GGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHHHHHH
Confidence            99999999999999999999987632  2223356899999999999999999999999999999999999999999999


Q ss_pred             hcC------------CCCCCCCCchhhhhcC
Q psy17371        219 SDH------------SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       219 ~~~------------~~~vpyrdSkLT~lLq  237 (237)
                      +++            ..||||||||||+|||
T Consensus       286 ~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLq  316 (366)
T 2zfi_A          286 AEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR  316 (366)
T ss_dssp             HHHC--------------CCGGGSHHHHHTG
T ss_pred             HhcccccccccccccCCcccccccHHHHHHH
Confidence            873            3699999999999997

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9

Probab=100.00  E-value=8.1e-60  Score=407.12  Aligned_cols=228  Identities=38%  Similarity=0.553  Sum_probs=202.6

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|...+.+  +|+..++|+++++           |++||||||||+|+..+.  .+++|||||++++||+.+.+
T Consensus        48 ~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~--~~~~Giipr~~~~lF~~i~~  125 (355)
T 1goj_A           48 SFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDD--PDGRGVIPRIVEQIFTSILS  125 (355)
T ss_dssp             EEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHHTBSCTTS--TTTBCHHHHHHHHHHHHHHT
T ss_pred             EEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcceEEEECCCCCCcceEeecCCCCC--cccCCchHHHHHHHHHHHHh
Confidence            35789999766554  9999999987754           777777777777754211  25689999999999998754


Q ss_pred             ---CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         73 ---NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        73 ---~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                         .++|.|++||+|||||+|+|||++....+.+++++.++++++|++++.|.|++|++++|..|.++|+..+|.+|..|
T Consensus       126 ~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~S  205 (355)
T 1goj_A          126 SAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQES  205 (355)
T ss_dssp             SCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             cccCceEEEEEEEEEEECCEEEEcccCccCCceeEEcCCCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCC
Confidence               47899999999999999999999988889999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYR  228 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyr  228 (237)
                      ||||+||+|+|.+.+...+.  ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|++++ .|||||
T Consensus       206 SRSH~if~i~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyR  283 (355)
T 1goj_A          206 SRSHSIFVITITQKNVETGS--AKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYR  283 (355)
T ss_dssp             GGCEEEEEEEEEEEETTTTE--EEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGG
T ss_pred             CCceEEEEEEEEEeccCCCc--eeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCc
Confidence            99999999999998754433  568999999999999999999999999999999999999999999999875 699999


Q ss_pred             CchhhhhcC
Q psy17371        229 NSTLTYLLK  237 (237)
Q Consensus       229 dSkLT~lLq  237 (237)
                      |||||+|||
T Consensus       284 dSkLT~lLq  292 (355)
T 1goj_A          284 DSKLTRILQ  292 (355)
T ss_dssp             GCHHHHHTG
T ss_pred             cCHHHHHHH
Confidence            999999997

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}

Probab=100.00  E-value=7.4e-60  Score=409.80  Aligned_cols=232  Identities=34%  Similarity=0.491  Sum_probs=181.6

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCC-----CCCCCccccchhHHHhh
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDS-----SLKETTGIIPRFCHQLF   67 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~-----~~~~~~Gii~r~~~~Lf   67 (237)
                      ..+||++|...+.+  +|+..++|+++++           |++||||||||+|+....     ...+++|||||++++||
T Consensus        68 ~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF  147 (373)
T 2wbe_C           68 KFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLF  147 (373)
T ss_dssp             EEECSEEECTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHH
T ss_pred             EEeccEEeccccchhHHHHHHHHHHHHHHhCCceEEEEeecCCCCCcceecccCccccccccccccCCCcChHHHHHHHH
Confidence            35788888666544  9999888877654           777778888887765311     11247899999999999


Q ss_pred             ccCCC-CceEEEEEEEEEEeccccccccccc-cccceeeecC--CCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccC
Q psy17371         68 DQIPS-NMVAQVKISYLEIYNEFVYDLLSSE-RKALKVRESP--DTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST  143 (237)
Q Consensus        68 ~~~~~-~~~~~v~vS~~EIy~e~v~DLL~~~-~~~~~i~~~~--~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~  143 (237)
                      +.+.. .++|.|++||+|||||+|+|||++. ...+.+++++  .+++++.|++++.|.+++|++++|..|.++|...+|
T Consensus       148 ~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T  227 (373)
T 2wbe_C          148 DELRMMEVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATT  227 (373)
T ss_dssp             HHHHHCCSCEEEEEEEEEEETTEEEESSCTTSCSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCS
T ss_pred             HHHHhcCceEEEEEEEEEEeCCeEEECCCCCCCCCceeEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccccc
Confidence            98854 3789999999999999999999875 4567888874  578999999999999999999999999999999999


Q ss_pred             CCCCCCCCceEEEEEEEEEEec-CCCceeeeeeEEEEEEcCCCCCcCCcCch-hHHHHHHHHHhHHHHHHHHHHHHhhcC
Q psy17371        144 NMNDKSSRSHSIFQIQLTLTED-TGSSVTQKCSQINLVDLAGSERVAQTKAT-EERFKEGRNINLSLMTLGQVITNLSDH  221 (237)
Q Consensus       144 ~~n~~ssrsH~v~~i~v~~~~~-~~~~~~~~~s~l~~vDLagse~~~~~~~~-~~~~~e~~~in~sl~~L~~vi~aL~~~  221 (237)
                      .+|..|||||+||+|+|.+... .........|+|+||||||+||..+++.. |.+++|+..||+||++|++||.+|+++
T Consensus       228 ~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~  307 (373)
T 2wbe_C          228 LMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDR  307 (373)
T ss_dssp             CHHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999998652 22333356899999999999999998876 899999999999999999999999999


Q ss_pred             CCCCCCCCchhhhhcC
Q psy17371        222 SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       222 ~~~vpyrdSkLT~lLq  237 (237)
                      ++||||||||||+|||
T Consensus       308 ~~hvPyRdSkLT~lLq  323 (373)
T 2wbe_C          308 APHVPYRESKLTRLLQ  323 (373)
T ss_dssp             SSCCCGGGCHHHHHTH
T ss_pred             CCcCccccchHHHHHH
Confidence            9999999999999996

>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.9e-60  Score=408.71  Aligned_cols=227  Identities=37%  Similarity=0.494  Sum_probs=171.2

Q ss_pred             cccchhhhh-hhhHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC-
Q psy17371          7 PLQSHIEES-LATLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN-   73 (237)
Q Consensus         7 ~~~~~~~~~-~~~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~-   73 (237)
                      -+||+||.. .+..+|+..++|+++++           |++||||||||+|+..+.   +++|||||++++||+.+++. 
T Consensus        74 F~FD~Vf~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~---~~~Giipra~~~lF~~~~~~~  150 (359)
T 3nwn_A           74 FKLDGVLHDASQDLVYETVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMGATENY---KHRGILPRALQQVFRMIEERP  150 (359)
T ss_dssp             EECSEEEESCCHHHHHHHHTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSCG---GGBCHHHHHHHHHHHHHHTCT
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCCccEEeCCccCCc---cchhhHHHHHHHHHHHhhcCC
Confidence            468888853 23339999999877766           555555555555544222   56899999999999987544 


Q ss_pred             -ceEEEEEEEEEEeccccccccccc------cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         74 -MVAQVKISYLEIYNEFVYDLLSSE------RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        74 -~~~~v~vS~~EIy~e~v~DLL~~~------~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                       +.|.|++||+|||||+|+|||++.      ...+.+++++ .++++.|++++.|.+++|+++++..|.++|...+|.+|
T Consensus       151 ~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~-~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N  229 (359)
T 3nwn_A          151 THAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMN  229 (359)
T ss_dssp             TSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET-TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEEEEEEEeccccccccccccccccccccceEEecC-CceEEeccEEEEecCHHHHHHHHHhhhhhcccccccCc
Confidence             789999999999999999999853      4456677766 56999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCC
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVP  225 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~v  225 (237)
                      ..|||||+||+|+|.+............|+|+||||||+||..++++.+.+++|+..||+||++|++||.+|++++ .||
T Consensus       230 ~~SSRSH~if~i~i~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hV  309 (359)
T 3nwn_A          230 KNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHI  309 (359)
T ss_dssp             CCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----C
T ss_pred             cccCcceEEEEEEEEeecccccCcccccccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcC
Confidence            9999999999999988764444444678999999999999999999999999999999999999999999999765 599


Q ss_pred             CCCCchhhhhcC
Q psy17371        226 PYRNSTLTYLLK  237 (237)
Q Consensus       226 pyrdSkLT~lLq  237 (237)
                      ||||||||||||
T Consensus       310 PYRdSkLT~lLq  321 (359)
T 3nwn_A          310 PFRQCKLTHALK  321 (359)
T ss_dssp             CGGGSHHHHHTH
T ss_pred             CcccCHHHHHHH
Confidence            999999999997

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*

Probab=100.00  E-value=2.3e-59  Score=406.68  Aligned_cols=224  Identities=31%  Similarity=0.403  Sum_probs=171.0

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|...+.+  +|+..++|+++++           |++||||||||+|+........++|||||++++||..+++
T Consensus       102 ~F~FD~VF~~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~  181 (387)
T 2heh_A          102 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQ  181 (387)
T ss_dssp             EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTS
T ss_pred             EEeeeEEEecCCCceeehhhhHHHHHHHHhcCCceEEEEecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhc
Confidence            35788999766554  9999999877765           6666666666666432111125789999999999998875


Q ss_pred             ----CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCC
Q psy17371         73 ----NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDK  148 (237)
Q Consensus        73 ----~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~  148 (237)
                          .+.+.|++||+|||||+|+|||++ ...+.+++++.+++++.|++++.|.|++|++++|..|.++|+.++|.+|..
T Consensus       182 ~~~~~~~~~V~vS~~EIYnE~v~DLL~~-~~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~  260 (387)
T 2heh_A          182 PCYRKLGLEVYVTFFEIYNGKLFDLLNK-KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSN  260 (387)
T ss_dssp             HHHHTTTCEEEEEEEEEETTEEEETTTT-TEECEEEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------C
T ss_pred             ccccCceEEEEEEEEEecCCeEEECCCC-CccceEEEcCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCC
Confidence                368999999999999999999987 456899999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcC-chhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        149 SSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK-ATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       149 ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      |||||+||+|.+.+..       ...|+|+||||||+||..+++ ..+.+.+|+..||+||++|++||.||++++.||||
T Consensus       261 SSRSH~Ifti~v~~~~-------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPY  333 (387)
T 2heh_A          261 SSRSHACFQIILRAKG-------RMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPF  333 (387)
T ss_dssp             GGGSEEEEEEEEESSS-------SEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCG
T ss_pred             cccceEEEEEEEEECC-------eeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhcCCCCCCc
Confidence            9999999999998542       458999999999999987765 45677889999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       334 RdSKLTrlLq  343 (387)
T 2heh_A          334 RESKLTQVLR  343 (387)
T ss_dssp             GGSHHHHHTG
T ss_pred             cccHHHHHHh
Confidence            9999999997

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...

Probab=100.00  E-value=2.2e-59  Score=405.32  Aligned_cols=232  Identities=35%  Similarity=0.523  Sum_probs=184.6

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCC---CC--CCCccccchhHHHhh
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDS---SL--KETTGIIPRFCHQLF   67 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~---~~--~~~~Gii~r~~~~Lf   67 (237)
                      ..+||++|...+.+  +|+..++|+++++           |++||||||||+|+....   .+  .+.+|||||++++||
T Consensus        56 ~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF  135 (359)
T 1x88_A           56 TYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIF  135 (359)
T ss_dssp             EEECSEEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHH
T ss_pred             EEeceEEEeccCchhHHHHHHHHHhHHHHhCCCceEEEEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHH
Confidence            35788999665544  9999999877655           666666666666654211   00  124799999999999


Q ss_pred             ccCCCC-ceEEEEEEEEEEecccccccccccc---ccceeeecCC--CCeeecCcEEEEecCHHHHHHHHHHHHhhCccc
Q psy17371         68 DQIPSN-MVAQVKISYLEIYNEFVYDLLSSER---KALKVRESPD--TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATA  141 (237)
Q Consensus        68 ~~~~~~-~~~~v~vS~~EIy~e~v~DLL~~~~---~~~~i~~~~~--~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~  141 (237)
                      +.+.+. ++|.|++||+|||||+|+|||++..   ..+.+++++.  +++++.|++++.|.|++|++++|..|.++|..+
T Consensus       136 ~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~  215 (359)
T 1x88_A          136 EKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTA  215 (359)
T ss_dssp             HHTSSSSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHH
T ss_pred             HHHhccCceEEEEEEEEEEeCceeeehhcccccccccceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccc
Confidence            999754 8899999999999999999998763   5688999884  789999999999999999999999999999999


Q ss_pred             cCCCCCCCCCceEEEEEEEEEEe-cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhc
Q psy17371        142 STNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD  220 (237)
Q Consensus       142 ~~~~n~~ssrsH~v~~i~v~~~~-~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~  220 (237)
                      +|.+|..|||||+||+|+|.+.. ...+......|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|++
T Consensus       216 ~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~  295 (359)
T 1x88_A          216 ATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVE  295 (359)
T ss_dssp             HHHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHT
T ss_pred             cccCCCCCCCccEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhc
Confidence            99999999999999999998875 33333335789999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhhhhcC
Q psy17371        221 HSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       221 ~~~~vpyrdSkLT~lLq  237 (237)
                      +++||||||||||+|||
T Consensus       296 ~~~hvPyRdSkLT~lLq  312 (359)
T 1x88_A          296 RTPHVPYRESKLTRILQ  312 (359)
T ss_dssp             TCSCCCGGGSHHHHHTG
T ss_pred             CCCCCccccchHHHHHH
Confidence            99999999999999997

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*

Probab=100.00  E-value=5e-59  Score=406.88  Aligned_cols=224  Identities=31%  Similarity=0.401  Sum_probs=171.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|...+.+  +|+.+++|+++++           |++||||||||+|+........++|||||++++||..++.
T Consensus       122 ~F~FD~VF~~~~tQ~~Vy~~~~~plV~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~  201 (410)
T 1v8k_A          122 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQ  201 (410)
T ss_dssp             EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTS
T ss_pred             EEeeeEEEecCCChhhhhHHHHHHHHHHHhcCCceeEEeecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhh
Confidence            35689999766654  9999999977765           5555555555555421111124689999999999998865


Q ss_pred             ----CceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCC
Q psy17371         73 ----NMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDK  148 (237)
Q Consensus        73 ----~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~  148 (237)
                          .+.+.|++||+|||||+|+|||++ ...+.+++++.+++++.|++++.|.|++|++++|..|.++|+.++|.+|..
T Consensus       202 ~~~~~~~~~V~vS~lEIYnE~i~DLL~~-~~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~  280 (410)
T 1v8k_A          202 PRYRNLNLEVYVTFFEIYNGKVFDLLNK-KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSN  280 (410)
T ss_dssp             HHHHTTCCEEEEEEEEEETTEEEETTTT-TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------C
T ss_pred             hcccCccEEEEEEEEEeeCCEEEECCCC-CCCceEEECCCCCeEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCC
Confidence                368999999999999999999987 466899999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcC-chhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        149 SSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK-ATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       149 ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      |||||+||+|.|.+..       ...|+|+|||||||||..+++ ..+.+.+|+..||+||++|++||.+|++++.||||
T Consensus       281 SSRSH~Ifti~v~~~~-------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPY  353 (410)
T 1v8k_A          281 SSRSHACFQILLRTKG-------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPF  353 (410)
T ss_dssp             CCSSEEEEEEEEESSS-------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------C
T ss_pred             CCCceEEEEEEEEeCC-------cceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhcCCCCCCc
Confidence            9999999999998542       458999999999999987765 45677889999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       354 RdSKLTrLLq  363 (410)
T 1v8k_A          354 RESKLTQVLR  363 (410)
T ss_dssp             CCCHHHHHTT
T ss_pred             ccchhHHHHh
Confidence            9999999997

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*

Probab=100.00  E-value=2.4e-58  Score=397.15  Aligned_cols=229  Identities=32%  Similarity=0.459  Sum_probs=185.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC-CCCccccchhHHHhhccCCC----CceE
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL-KETTGIIPRFCHQLFDQIPS----NMVA   76 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~-~~~~Gii~r~~~~Lf~~~~~----~~~~   76 (237)
                      ..+||++|...+.+  +|+.. .++++++  |+|+|+++||++|+||++++ .+++|||||++++||+.+++    .+.|
T Consensus        53 ~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~Giipr~~~~lF~~i~~~~~~~~~~  131 (347)
T 1f9v_A           53 EFKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDY  131 (347)
T ss_dssp             EEEESEEECTTCCHHHHHHHH-HHHHGGGGGTCCEEEEEECCTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             EEeeCEEECCCCCHHHHHHHH-HHHHHHhcCCceeEEEEECCCCCCCcEeccCCCCCchHHHHHHHHHHHHhhhhcCCce
Confidence            35788888765544  89874 5777766  77777777777777777766 45689999999999998753    3789


Q ss_pred             EEEEEEEEEeccccccccccccc---------cceeeecC-CCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCC
Q psy17371         77 QVKISYLEIYNEFVYDLLSSERK---------ALKVRESP-DTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMN  146 (237)
Q Consensus        77 ~v~vS~~EIy~e~v~DLL~~~~~---------~~~i~~~~-~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n  146 (237)
                      .|++||+|||||+|+|||++...         .+.+++++ .+++++.|++++.|.+++|++++|..|.++|..++|.+|
T Consensus       132 ~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N  211 (347)
T 1f9v_A          132 KVNCEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASN  211 (347)
T ss_dssp             EEEEEEEEEETTEEEETTC-------------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------
T ss_pred             EEEEEEEEEECCeeeeccCCccccccccccCCceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCC
Confidence            99999999999999999987632         46777764 577999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC---C
Q psy17371        147 DKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS---A  223 (237)
Q Consensus       147 ~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~---~  223 (237)
                      ..|||||+||+|+|.+.+...+.  ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|++++   +
T Consensus       212 ~~SSRSH~if~i~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~  289 (347)
T 1f9v_A          212 EHSSASHSIFIIHLSGSNAKTGA--HSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKR  289 (347)
T ss_dssp             CCGGGSEEEEEEEEEEECC--CC--EEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---C
T ss_pred             CCCCCceEEEEEEEEEecCCCCc--eeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCC
Confidence            99999999999999987643332  468999999999999999999999999999999999999999999999877   7


Q ss_pred             CCCCCCchhhhhcC
Q psy17371        224 VPPYRNSTLTYLLK  237 (237)
Q Consensus       224 ~vpyrdSkLT~lLq  237 (237)
                      ||||||||||+|||
T Consensus       290 hiPyRdSkLT~lLq  303 (347)
T 1f9v_A          290 HIPFRNSKLTYLLQ  303 (347)
T ss_dssp             CCCGGGSHHHHHHH
T ss_pred             cCccccCHHHHHHH
Confidence            99999999999996

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.5e-58  Score=399.92  Aligned_cols=226  Identities=34%  Similarity=0.411  Sum_probs=167.7

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC-
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-   72 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~-   72 (237)
                      .+||++|...+.+  +|+.. .++++++           |++||||||||+|+...  ..+++|||||++++||+.+++ 
T Consensus        85 F~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~--~~~~~Giipr~~~~lF~~i~~~  161 (376)
T 2rep_A           85 FSFDRVFPPGSGQDEVFEEI-AMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGG--DPQLEGLIPRALRHLFSVAQEL  161 (376)
T ss_dssp             EECSEEECTTCCHHHHHHHH-HHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSC--CGGGBCHHHHHHHHHHHHHHHG
T ss_pred             eeecEEcCCcccchhhhhhH-HHHHHHhcCCCceEEEEeCCCCCCCceEeecCCCC--CcccCCcHHHHHHHHHHHHHHh
Confidence            5678888655544  88874 4666554           66666666666665421  024789999999999988753 


Q ss_pred             ---CceEEEEEEEEEEeccccccccccc-----cccceeeec--CCCCeeecCcEEEEecCHHHHHHHHHHHHhhCcccc
Q psy17371         73 ---NMVAQVKISYLEIYNEFVYDLLSSE-----RKALKVRES--PDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAS  142 (237)
Q Consensus        73 ---~~~~~v~vS~~EIy~e~v~DLL~~~-----~~~~~i~~~--~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~  142 (237)
                         .+.|.|++||+|||||+|+|||++.     ...+.++++  +.+++++.|++++.|.+++|++++|..|.++|..++
T Consensus       162 ~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~  241 (376)
T 2rep_A          162 SGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVAR  241 (376)
T ss_dssp             GGGTEEEEEEEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC
T ss_pred             hcCCeEEEEEEEEEEEECCEeeEccccccccccCCCceEEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhccccc
Confidence               3789999999999999999999874     346888887  578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchh----HHHHHHHHHhHHHHHHHHHHHHh
Q psy17371        143 TNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATE----ERFKEGRNINLSLMTLGQVITNL  218 (237)
Q Consensus       143 ~~~n~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~----~~~~e~~~in~sl~~L~~vi~aL  218 (237)
                      |.+|..|||||+||+|+|.+.+.....  ...|+|+||||||+||..++++.|    .+++|+..||+||++|++||.||
T Consensus       242 T~~N~~SSRSH~Ifti~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL  319 (376)
T 2rep_A          242 TAQNERSSRSHSVFQLQISGEHSSRGL--QCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMAL  319 (376)
T ss_dssp             -----CGGGSEEEEEEEEEEEESSSCC--EEEEEEEEEECCCCC------------------------CHHHHHHHHHHH
T ss_pred             ccCCCCCCCceEEEEEEEEEEecCCCc--EEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHH
Confidence            999999999999999999988743332  467999999999999999988888    99999999999999999999999


Q ss_pred             hcCCCCCCCCCchhhhhcC
Q psy17371        219 SDHSAVPPYRNSTLTYLLK  237 (237)
Q Consensus       219 ~~~~~~vpyrdSkLT~lLq  237 (237)
                      +++++||||||||||||||
T Consensus       320 ~~~~~hVPYRdSkLT~LLq  338 (376)
T 2rep_A          320 SNKESHVPYRNSKLTYLLQ  338 (376)
T ss_dssp             HTTCSCCCGGGSHHHHHTG
T ss_pred             hcCCCccCCcCCHHHHHHH
Confidence            9999999999999999997

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}

Probab=100.00  E-value=5.3e-58  Score=395.56  Aligned_cols=229  Identities=32%  Similarity=0.489  Sum_probs=180.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC-CCCccccchhHHHhhccCCC----CceE
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL-KETTGIIPRFCHQLFDQIPS----NMVA   76 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~-~~~~Gii~r~~~~Lf~~~~~----~~~~   76 (237)
                      ..+||++|.....+  +|+. +.++++++  |+|+|+++||++|+||++++ ..++|||||++++||+.+++    .++|
T Consensus        54 ~f~FD~Vf~~~~~Q~~vf~~-v~~lv~~~l~G~n~tifAYGqTGSGKTyTm~g~~~Giipr~~~~lF~~~~~~~~~~~~~  132 (349)
T 3t0q_A           54 NFQFDMIFEPSHTNKEIFEE-IRQLVQSSLDGYNVCIFAYGQTGSGKTYTMLNAGDGMIPMTLSHIFKWTANLKERGWNY  132 (349)
T ss_dssp             EEEESEEECTTCCHHHHHHH-HHHHHHGGGTTCEEEEEEECSTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             eeecCEEECCCccHHHHHHH-HHHHHHHHHCCcceeEEEeCCCCCCCceEeCCCCCchhhHHHHHHHHHHHHhhhcCcee
Confidence            35788888766554  8886 45777766  77777777777777777766 44579999999999987753    3789


Q ss_pred             EEEEEEEEEeccccccccccc-----------cccceeeecCC-CCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCC
Q psy17371         77 QVKISYLEIYNEFVYDLLSSE-----------RKALKVRESPD-TGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTN  144 (237)
Q Consensus        77 ~v~vS~~EIy~e~v~DLL~~~-----------~~~~~i~~~~~-~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~  144 (237)
                      .|.+||+|||||+|+|||++.           ...+.+++++. +++++.|++++.|.+++|++++|..|.++|...+|.
T Consensus       133 ~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~  212 (349)
T 3t0q_A          133 EMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATR  212 (349)
T ss_dssp             EEEEEEEEEETTEEEETTC---------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC----------
T ss_pred             EEEEEEEEEEcchhhccccccccccccccccccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccc
Confidence            999999999999999999864           34567777664 579999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCC-
Q psy17371        145 MNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA-  223 (237)
Q Consensus       145 ~n~~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~-  223 (237)
                      +|..|||||+||+|++.+.+...+.  ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.||+++++ 
T Consensus       213 ~N~~SSRSH~if~i~v~~~~~~~~~--~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~  290 (349)
T 3t0q_A          213 SNERSSRSHSVFMVHINGRNLHTGE--TSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAG  290 (349)
T ss_dssp             --CTGGGSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGG
T ss_pred             cccccCCcceEEEEEEEEEecCCCC--eeEEEEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCC
Confidence            9999999999999999988754433  4689999999999999999999999999999999999999999999988764 


Q ss_pred             --CCCCCCchhhhhcC
Q psy17371        224 --VPPYRNSTLTYLLK  237 (237)
Q Consensus       224 --~vpyrdSkLT~lLq  237 (237)
                        ||||||||||+|||
T Consensus       291 ~~hiPyRdSkLT~lLq  306 (349)
T 3t0q_A          291 KRYIPFRNSKLTYLLQ  306 (349)
T ss_dssp             GSCCCGGGSHHHHHHG
T ss_pred             CCcCCCcCCHHHHHHH
Confidence              99999999999997

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9

Probab=100.00  E-value=3.6e-58  Score=397.15  Aligned_cols=224  Identities=27%  Similarity=0.380  Sum_probs=183.5

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhh------------cCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC-
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEK------------IGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP-   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~------------~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~-   71 (237)
                      .+||++|.....+  +|+..++|++++            ||++||||||||+|+... ...+++|||||++++||+.++ 
T Consensus        52 F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~~~G~n~tifAYGqTGSGKTyTM~G~~~~-~~~~~~Giipr~~~~lF~~i~~  130 (360)
T 1ry6_A           52 FIVDKVFDDTVDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTMLGSQPY-GQSDTPGIFQYAAGDIFTFLNI  130 (360)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHHHBSSST-TTSSCBCHHHHHHHHHHHHHHH
T ss_pred             EEeeeEecCCCCHHHHHHHHhhhhhhhhccCCceeEEEeeCCCCCCCCEEEecCCCC-CCccCCCcHHHHHHHHHHHHHh
Confidence            4578888655444  888877775432            378888888888876421 112679999999999999874 


Q ss_pred             --CCceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         72 --SNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        72 --~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                        ..+.+.|++||+|||||+|+|||++. +.+.+++++.++++++|++++.|.+++|++++|..|.++|..++|.+|..|
T Consensus       131 ~~~~~~~~v~vS~~EIYnE~v~DLL~~~-~~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~S  209 (360)
T 1ry6_A          131 YDKDNTKGIFISFYEIYCGKLYDLLQKR-KMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDES  209 (360)
T ss_dssp             HCSSSCEEEEEEEEEEETTEEEESCCC------------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGG
T ss_pred             hccCCceEEEEEEEEeeCCeeEEcccCC-ccceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCC
Confidence              34789999999999999999999874 457788999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchh-HHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATE-ERFKEGRNINLSLMTLGQVITNLSDHSAVPPYR  228 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~-~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyr  228 (237)
                      ||||+||+|++.+...     ....|+|+|||||||||..+++..+ .+++|+..||+||++|++||.+|++++.|||||
T Consensus       210 SRSH~if~i~v~~~~~-----~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyR  284 (360)
T 1ry6_A          210 SRSHAILNIDLKDINK-----NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFR  284 (360)
T ss_dssp             GGSEEEEEEEEEETTT-----TEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGG
T ss_pred             ccceEEEEEEEEeccC-----CcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Confidence            9999999999986531     1457999999999999998887654 578899999999999999999999999999999


Q ss_pred             CchhhhhcC
Q psy17371        229 NSTLTYLLK  237 (237)
Q Consensus       229 dSkLT~lLq  237 (237)
                      |||||||||
T Consensus       285 dSkLT~lLq  293 (360)
T 1ry6_A          285 DSELTKVLR  293 (360)
T ss_dssp             GCHHHHHTG
T ss_pred             cCHHHHHHH
Confidence            999999997

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*

Probab=100.00  E-value=1e-57  Score=392.21  Aligned_cols=217  Identities=31%  Similarity=0.414  Sum_probs=159.7

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      .+||++|...+.+  +|+..++|+++++           |++||||||||.|+.......+++|||||++++||+.+++.
T Consensus        63 F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~  142 (344)
T 3dc4_A           63 FHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTAR  142 (344)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHHHTCCEEEEEESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHS
T ss_pred             EEcceEECCCCCHHHHHHhhccchhhHhhCCCceEEEEecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhh
Confidence            5788999666554  9999998877665           55555555555554322222367899999999999987432


Q ss_pred             -----ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCC
Q psy17371         74 -----MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDK  148 (237)
Q Consensus        74 -----~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~  148 (237)
                           ..+.|++||+|||||+|+|||++......      ......+++++.|.+++|++++|..|.++|+..+|.+|..
T Consensus       143 ~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~------~~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~  216 (344)
T 3dc4_A          143 QENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPM------VAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSN  216 (344)
T ss_dssp             SSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBC------CSSTTTCSCCEECSSHHHHHHHHHHHHHTCC---------
T ss_pred             hhccccceEEEEEEEEEeCCeeEEccCCCCCCcc------ccccccCceecccCCHHHHHHHHHHHHhhcccccccCCCC
Confidence                 56899999999999999999987533221      1223468999999999999999999999999999999999


Q ss_pred             CCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCC
Q psy17371        149 SSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYR  228 (237)
Q Consensus       149 ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyr  228 (237)
                      |||||+||+|++.+.        ...|+|+||||||+||..+++..|.+++|+..||+||++|++||.+|+++++|||||
T Consensus       217 SSRSH~Ifti~v~~~--------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hiPyR  288 (344)
T 3dc4_A          217 SSRSHAIVTIHVKSK--------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYR  288 (344)
T ss_dssp             -CCEEEEEEEEEECS--------SCEEEEEEEECCCCCCC-------------CCSCCHHHHHHHHHHHHHTTCSSCCGG
T ss_pred             CCCceEEEEEEEEec--------CcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcCCcc
Confidence            999999999999743        357999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhcC
Q psy17371        229 NSTLTYLLK  237 (237)
Q Consensus       229 dSkLT~lLq  237 (237)
                      |||||+|||
T Consensus       289 dSkLT~lLq  297 (344)
T 3dc4_A          289 DSVLTTVLQ  297 (344)
T ss_dssp             GSHHHHHTT
T ss_pred             ccHHHHHHH
Confidence            999999997

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*

Probab=100.00  E-value=1.7e-57  Score=399.03  Aligned_cols=218  Identities=35%  Similarity=0.496  Sum_probs=174.2

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC-
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-   72 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~-   72 (237)
                      .+||+||...+.+  +|+. +.|+++++           |++||||||||+|..      +++|||||++++||+.+.+ 
T Consensus       108 F~FD~VF~~~~~Q~~Vf~~-v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~------~~~Giipr~~~~lF~~i~~~  180 (412)
T 3u06_A          108 FSFDQVFHPLSSQSDIFEM-VSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVP------ESVGVIPRTVDLLFDSIRGY  180 (412)
T ss_dssp             EECSEEECTTCCHHHHHTT-THHHHHHHHTTCCEEEEEESSTTSSHHHHHTEET------TEECHHHHHHHHHHHHHHHH
T ss_pred             EeeCeEcCCCCCHHHHHHH-HHHHHHHHHCCCceEEEEecCCCCCCeeEecCCC------CCCccHHHHHHHHHHhhhhh
Confidence            5677777655544  7764 45665554           666666666666655      7899999999999998853 


Q ss_pred             ---CceEEEEEEEEEEeccccccccccccccceee--ecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         73 ---NMVAQVKISYLEIYNEFVYDLLSSERKALKVR--ESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        73 ---~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~--~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                         .+.|.|++||+|||||+|+|||++....+.++  +++.+++++.|++++.|.+++|++.+|..|.++|..++|.+|.
T Consensus       181 ~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~  260 (412)
T 3u06_A          181 RNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNE  260 (412)
T ss_dssp             GGGTEEEEEEEEEEEEETTEEEETTCCSCCCCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHH
T ss_pred             cccCceEEEEEEEEEEeCCeeEEcCCCCCCCceeeeeecCCCCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCC
Confidence               37999999999999999999998876655555  5678899999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      .|||||+||+|++.+.......  ...|+|+||||||+|+..    .+.+++|+..||+||++|++||.||+++++||||
T Consensus       261 ~SSRSH~if~i~v~~~~~~~~~--~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPy  334 (412)
T 3u06_A          261 RSSRSHAVTKLELIGRHAEKQE--ISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPY  334 (412)
T ss_dssp             HHTTCEEEEEEEEEEEETTTTE--EEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred             CCcCceEEEEEEEEEEeCCCCC--EEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHHHhccCCCCCc
Confidence            9999999999999988754433  468999999999999974    3578999999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       335 RdSkLT~LLq  344 (412)
T 3u06_A          335 RNSKLTHLLM  344 (412)
T ss_dssp             GGSHHHHHHG
T ss_pred             cccHHHHHHH
Confidence            9999999997

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8e-57  Score=394.66  Aligned_cols=228  Identities=32%  Similarity=0.464  Sum_probs=188.8

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC-CCCccccchhHHHhhccCCC----CceEE
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL-KETTGIIPRFCHQLFDQIPS----NMVAQ   77 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~-~~~~Gii~r~~~~Lf~~~~~----~~~~~   77 (237)
                      .+||++|.....+  +|+.. .++++++  |+|+|+++||++|+||++++ .+++|||||++++||+.+++    .+.|.
T Consensus       110 F~FD~VF~~~~~Q~~Vf~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~~Giipr~~~~lF~~i~~~~~~~~~~~  188 (403)
T 4etp_A          110 FKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYK  188 (403)
T ss_dssp             EEESEEECTTCCHHHHHHHH-HHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTTTSHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred             EEcCEEECCCCchHHHHHHH-HHHHHHHhCCcceEEEEECCCCCCCceEeCCCCCccchhHHHHHHHHHHhhhccCceEE
Confidence            4688888666554  88764 4666665  66776666666666666666 44579999999999998753    37999


Q ss_pred             EEEEEEEEecccccccccccc---------ccceeeecC-CCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         78 VKISYLEIYNEFVYDLLSSER---------KALKVRESP-DTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        78 v~vS~~EIy~e~v~DLL~~~~---------~~~~i~~~~-~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                      |++||+|||||+|+|||++..         ..+.+++++ .+++++.|++++.|.+++|++.+|..|.++|..++|.+|.
T Consensus       189 v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~  268 (403)
T 4etp_A          189 VNAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNE  268 (403)
T ss_dssp             EEEEEEEEETTEEEETTCC--------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHH
T ss_pred             EEEEEEEEecceeeEccCCccccccccccCcceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCc
Confidence            999999999999999998752         346677766 4669999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCC---C
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSA---V  224 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~---~  224 (237)
                      .|||||+||+|++.+.+...+.  ...|+|+|||||||||..+++..|.+++|+..||+||++|++||.||+++++   |
T Consensus       269 ~SSRSH~if~i~v~~~~~~~~~--~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~h  346 (403)
T 4etp_A          269 HSSRSHSIFIIHLSGSNAKTGA--HSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRH  346 (403)
T ss_dssp             HHHTSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSC
T ss_pred             ccCCcccEEEEEEEEeecCCCC--eeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCc
Confidence            9999999999999988744433  4679999999999999999999999999999999999999999999988664   9


Q ss_pred             CCCCCchhhhhcC
Q psy17371        225 PPYRNSTLTYLLK  237 (237)
Q Consensus       225 vpyrdSkLT~lLq  237 (237)
                      |||||||||+|||
T Consensus       347 iPyRdSkLT~LLq  359 (403)
T 4etp_A          347 IPFRNSKLTYLLQ  359 (403)
T ss_dssp             CCGGGSHHHHHTG
T ss_pred             CCcccchHHHHHH
Confidence            9999999999997

>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}

Probab=100.00  E-value=3.7e-54  Score=404.35  Aligned_cols=228  Identities=35%  Similarity=0.486  Sum_probs=173.3

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC-CCCccccchhHHHhhccCCC----CceEE
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL-KETTGIIPRFCHQLFDQIPS----NMVAQ   77 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~-~~~~Gii~r~~~~Lf~~~~~----~~~~~   77 (237)
                      -+||+||.....+  +|+.. .++++++  |+|+|+++||++|+||++++ .+++|||||++++||+.+++    ...+.
T Consensus       432 f~fd~vf~~~~~q~~v~~~~-~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~~Giipr~~~~lf~~~~~~~~~~~~~~  510 (715)
T 4h1g_A          432 FLFDKIFEREQSNDLVFEEL-SQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPTNGMIPLSLKKIFNDIEELKEKGWSYT  510 (715)
T ss_dssp             EECSEEECSSCCHHHHGGGT-HHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTTTSHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             EEeceEeCCCCCHHHHHHHH-HHHHHHHhCCceEEEEccCCCCCchhhccCCCCCCcHHHHHHHHHHHHHHhhcCCceEE
Confidence            3566777544433  66643 4555555  67777777777777766666 45689999999999998753    36899


Q ss_pred             EEEEEEEEeccccccccccc---cccceeeecC-CCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCCCce
Q psy17371         78 VKISYLEIYNEFVYDLLSSE---RKALKVRESP-DTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSH  153 (237)
Q Consensus        78 v~vS~~EIy~e~v~DLL~~~---~~~~~i~~~~-~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH  153 (237)
                      |++||+|||||+|+|||++.   ...+.+++++ .++++++|++++.|.|.+|++++|..|.++|+..+|.+|..|||||
T Consensus       511 v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH  590 (715)
T 4h1g_A          511 VRGKFIEIYNEAIVDLLNPKIDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSH  590 (715)
T ss_dssp             EEEEEEEEETTEEEESSSCCCCTTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSE
T ss_pred             EEEEEEEEECCEEEECCCCCCCCCCcceeEEecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCcccccc
Confidence            99999999999999999875   3456666655 4559999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCCCchh
Q psy17371        154 SIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYRNSTL  232 (237)
Q Consensus       154 ~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyrdSkL  232 (237)
                      +||+|+|.+.+.....  ...|+|+|||||||||..+++..|.+++|+..||+||++|++||.+|+.++ +|||||||||
T Consensus       591 ~i~~i~~~~~~~~~~~--~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkL  668 (715)
T 4h1g_A          591 SIFIIDLQGYNSLTKE--SSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKL  668 (715)
T ss_dssp             EEEEEEEEEEETTTCC--EEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHH
T ss_pred             EEEEEEEEEEecCCCC--EeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHH
Confidence            9999999988754433  568999999999999999999999999999999999999999999998655 7999999999


Q ss_pred             hhhcC
Q psy17371        233 TYLLK  237 (237)
Q Consensus       233 T~lLq  237 (237)
                      |||||
T Consensus       669 T~lL~  673 (715)
T 4h1g_A          669 TYLLK  673 (715)
T ss_dssp             HHHTG
T ss_pred             HHHHH
Confidence            99997

>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9

Probab=99.34  E-value=2e-13  Score=95.90  Aligned_cols=36  Identities=44%  Similarity=0.715  Sum_probs=33.1

Q ss_pred             HHHhHHHHHHHHHHHHhhcC-CCCCCCCCchhhhhcC
Q psy17371        202 RNINLSLMTLGQVITNLSDH-SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       202 ~~in~sl~~L~~vi~aL~~~-~~~vpyrdSkLT~lLq  237 (237)
                      ..||+||++|++||.+|+++ +.||||||||||+|||
T Consensus         2 ~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~   38 (100)
T 2kin_B            2 KNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQ   38 (100)
T ss_dssp             CBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTH
T ss_pred             CcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHH
Confidence            35899999999999999988 4799999999999996

>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}

Probab=99.20  E-value=2.6e-12  Score=105.45  Aligned_cols=159  Identities=8%  Similarity=0.049  Sum_probs=104.8

Q ss_pred             cccchhhhhhh--h--HHHHHHhhhhhhhc---CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC-C-ceEE
Q psy17371          7 PLQSHIEESLA--T--LRYALQARNIFEKI---GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-N-MVAQ   77 (237)
Q Consensus         7 ~~~~~~~~~~~--~--~~y~~~~~~i~~~~---G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~-~-~~~~   77 (237)
                      ..||+||...+  .  .+|+. ..++++.+   |+|.|.++|+++|+||+          ||++..+|...+. . |+|.
T Consensus        59 f~FDRVf~p~s~Qe~~~vf~E-~~~~i~scLd~GyNvcIfSyGQTGsGKT----------~ral~q~f~~~~~~~~~~Y~  127 (298)
T 2o0a_A           59 YKFNRVIPHLKVSEDKFFTQE-YSVYHDMCLNQKKNFNLISLSTTPHGSL----------RESLIKFLAEKDTIYQKQYV  127 (298)
T ss_dssp             EECSEEEETTTSCHHHHHHHT-THHHHHHHHHTTCCEEEEEECSSCCHHH----------HHHHHHHHHSTTSHHHHHEE
T ss_pred             EEeeeEECccccccHHHHHHH-HHHHHHHHHhCCCceEEEEECCCCCCcc----------HHHHHHHHHHhhhhcccceE
Confidence            45777774444  3  35554 34444444   99999999999999954          9999999988855 2 8999


Q ss_pred             EEEEEEEEe-ccccccccccc--cccceeeecCCCCeeecCcEEEEecC-HHHHHHHHHHHHhhCccccCCCCCCCCCce
Q psy17371         78 VKISYLEIY-NEFVYDLLSSE--RKALKVRESPDTGIFVSDLSVHGVSS-FSEMQKWLSEGNKARATASTNMNDKSSRSH  153 (237)
Q Consensus        78 v~vS~~EIy-~e~v~DLL~~~--~~~~~i~~~~~~~~~i~~l~~~~v~s-~~e~~~~l~~~~~~R~~~~~~~n~~ssrsH  153 (237)
                      ++++|+||| ||.++|||...  .....|+.+.++...+.|++.++|.+ ++|+..++.-+..      ...   ..+.-
T Consensus       128 ~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~~~g~~iv~~s~~i~V~~~~edv~~~~~~~~~------~~~---~~~gi  198 (298)
T 2o0a_A          128 ITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKFEKHSISLDSKLVIIENGLEDLPLNFSCDEH------PNL---PHSGM  198 (298)
T ss_dssp             EEEEEEEEECC-CEEETTSCCC------CEEEECSSCEEEESCCEEESSGGGGSCTTTTCC----------------CEE
T ss_pred             EEEEEEEEecCCchHHhcCCCCCCCcceEEecCCCCEEecccEEEEccccHHHHHHHhhcccc------ccc---CCCCc
Confidence            999999999 99999999632  33678888889999999999999999 8988877711111      111   11346


Q ss_pred             EEEEEEEEEEec-CCCceeeeeeEEEEEEcCCC
Q psy17371        154 SIFQIQLTLTED-TGSSVTQKCSQINLVDLAGS  185 (237)
Q Consensus       154 ~v~~i~v~~~~~-~~~~~~~~~s~l~~vDLags  185 (237)
                      .|+.+.+...+. ..+......--++|+.+...
T Consensus       199 ~i~k~~~~~~~~~~~~~~~~~~~d~yf~e~~~~  231 (298)
T 2o0a_A          199 GIIKVQFFPRDSKSDGNNDPVPVDFYFIELNNL  231 (298)
T ss_dssp             EEEEEEEEESCC-------CCCEEEEEEEECSH
T ss_pred             eEEEEEEecCcccccccCCCCceEEEEEEeCCH
Confidence            677777776431 11110011233788887643

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}

Probab=97.42  E-value=1.1e-05  Score=70.58  Aligned_cols=43  Identities=14%  Similarity=0.125  Sum_probs=33.3

Q ss_pred             cCcccchhhhhhhhHH-HHHHhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATLR-YALQARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~~-y~~~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -+++|+.||+.+++++ -...|.+ ++-+||++||||||||+|++
T Consensus       118 ~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~  162 (403)
T 4etp_A          118 QQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPG  162 (403)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTT
T ss_pred             CCCchHHHHHHHHHHHHHHhCCcceEEEEECCCCCCCceEeCCCC
Confidence            4678999999888763 2334444 56679999999999999975

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}

Probab=97.41  E-value=9.3e-06  Score=70.28  Aligned_cols=20  Identities=10%  Similarity=0.280  Sum_probs=13.3

Q ss_pred             eeeeEeeeecCCCCCCCCCC
Q psy17371         36 EFVFHFSMMGDNLDSSLKET   55 (237)
Q Consensus        36 ~sgktyt~~G~~~~~~~~~~   55 (237)
                      +|+++||++|+||++++...
T Consensus       117 ~tifAYGqTGSGKTyTM~G~  136 (376)
T 2rep_A          117 VCIFAYGQTGSGKTFTMEGG  136 (376)
T ss_dssp             EEEEEECSTTSSHHHHHTBC
T ss_pred             eEEEEeCCCCCCCceEeecC
Confidence            45677777777777766443

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*

Probab=97.38  E-value=9.6e-06  Score=69.53  Aligned_cols=43  Identities=14%  Similarity=0.123  Sum_probs=32.6

Q ss_pred             cCcccchhhhhhhhHH-HHHHhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATLR-YALQARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~~-y~~~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -+++|+.||+.+++++ -...|.+ ++-+||++||||||||+|+.
T Consensus        62 ~~~~Q~~Vy~~v~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~  106 (347)
T 1f9v_A           62 QQDTNVDVFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPG  106 (347)
T ss_dssp             TTCCHHHHHHHHHHHHGGGGGTCCEEEEEECCTTSSHHHHHHSTT
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCceeEEEEECCCCCCCcEeccCCC
Confidence            3578999999888653 2223444 46669999999999999975

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*

Probab=97.37  E-value=1.9e-05  Score=68.20  Aligned_cols=11  Identities=9%  Similarity=0.208  Sum_probs=8.6

Q ss_pred             cccchhhhhhh
Q psy17371          7 PLQSHIEESLA   17 (237)
Q Consensus         7 ~~~~~~~~~~~   17 (237)
                      ++|+.||+...
T Consensus        68 asQ~~Vy~~~~   78 (366)
T 2zfi_A           68 ASQKQVYRDIG   78 (366)
T ss_dssp             CCHHHHHHHTH
T ss_pred             CcHHHHHHHHH
Confidence            67888887764

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}

Probab=97.37  E-value=9.9e-06  Score=69.51  Aligned_cols=43  Identities=16%  Similarity=0.139  Sum_probs=32.7

Q ss_pred             cCcccchhhhhhhhHHH-HHHhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATLRY-ALQARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~~y-~~~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -+++|+.||+.+.+++- ...|.+ ++-+||++||||||||+|++
T Consensus        63 ~~~~Q~~vf~~v~~lv~~~l~G~n~tifAYGqTGSGKTyTm~g~~  107 (349)
T 3t0q_A           63 PSHTNKEIFEEIRQLVQSSLDGYNVCIFAYGQTGSGKTYTMLNAG  107 (349)
T ss_dssp             TTCCHHHHHHHHHHHHHGGGTTCEEEEEEECSTTSSHHHHHHSTT
T ss_pred             CCccHHHHHHHHHHHHHHHHCCcceeEEEeCCCCCCCceEeCCCC
Confidence            36789999998887532 223444 56669999999999999975

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...

Probab=97.36  E-value=1.6e-05  Score=68.43  Aligned_cols=18  Identities=11%  Similarity=0.290  Sum_probs=12.6

Q ss_pred             eeeeEeeeecCCCCCCCC
Q psy17371         36 EFVFHFSMMGDNLDSSLK   53 (237)
Q Consensus        36 ~sgktyt~~G~~~~~~~~   53 (237)
                      +|+++||++|+||++++.
T Consensus        90 ~tifAYGqTGSGKTyTM~  107 (359)
T 1x88_A           90 CTIFAYGQTGTGKTFTME  107 (359)
T ss_dssp             EEEEEEECTTSSHHHHHT
T ss_pred             eEEEEeCCCCCCCceEEe
Confidence            566777777777777663

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9

Probab=97.29  E-value=2.3e-05  Score=67.33  Aligned_cols=10  Identities=30%  Similarity=0.036  Sum_probs=6.7

Q ss_pred             Ccccchhhhh
Q psy17371          6 NPLQSHIEES   15 (237)
Q Consensus         6 ~~~~~~~~~~   15 (237)
                      +++|+.||+.
T Consensus        58 ~~~Q~~Vy~~   67 (355)
T 1goj_A           58 SCKQSDIFDF   67 (355)
T ss_dssp             TCCHHHHHHH
T ss_pred             CCccHHHHHH
Confidence            4667777764

>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}

Probab=96.90  E-value=8.5e-05  Score=69.64  Aligned_cols=43  Identities=19%  Similarity=0.120  Sum_probs=33.2

Q ss_pred             cCcccchhhhhhhhHH-HHHHhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATLR-YALQARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~~-y~~~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -+++|+.||+.+++++ -...|.+ ++-+||++||||||||+|+.
T Consensus       440 ~~~~q~~v~~~~~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~  484 (715)
T 4h1g_A          440 REQSNDLVFEELSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPT  484 (715)
T ss_dssp             SSCCHHHHGGGTHHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCceEEEEccCCCCCchhhccCCCC
Confidence            4678999999998763 2233444 56679999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	237
d1bg2a_	323	c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId	4e-38
d1bg2a_	323	c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId	9e-06
d1x88a1	345	c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens),	3e-35
d1x88a1	345	c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens),	2e-05
d2zfia1	349	c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus),	7e-34
d2zfia1	349	c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus),	7e-05
d1f9va_	342	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	1e-29
d1f9va_	342	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	6e-06
d1v8ka_	362	c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c	2e-29
d1v8ka_	362	c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c	1e-05
d1goja_	354	c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5	1e-28
d1goja_	354	c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5	1e-05
d1ry6a_	330	c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu	2e-28
d1ry6a_	330	c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu	2e-05
d2ncda_	368	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	1e-26
d2ncda_	368	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	8e-05
d1sdma_	364	c.37.1.9 (A:) Kinesin heavy chain-like protein {Po	1e-22
d1sdma_	364	c.37.1.9 (A:) Kinesin heavy chain-like protein {Po	6e-06

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (334), Expect = 4e-38
 Identities = 74/214 (34%), Positives = 106/214 (49%), Gaps = 11/214 (5%)

Query: 33  GTNEFVFHFSMMGDNLDSSL------KETTGIIPRFCHQLFDQI---PSNMVAQVKISYL 83
           G N  +F +         ++       E  GIIPR    +F+ I     N+   +K+SY 
Sbjct: 74  GYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYF 133

Query: 84  EIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAST 143
           EIY + + DLL   +  L V E  +   +V   +   V S  E+   + EG   R  A T
Sbjct: 134 EIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVT 193

Query: 144 NMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRN 203
           NMN+ SSRSHSIF I +               ++ LVDLAGSE+V++T A      E +N
Sbjct: 194 NMNEHSSRSHSIFLINVKQENTQTEQKLS--GKLYLVDLAGSEKVSKTGAEGAVLDEAKN 251

Query: 204 INLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           IN SL  LG VI+ L++ S   PYR+S +T +L+
Sbjct: 252 INKSLSALGNVISALAEGSTYVPYRDSKMTRILQ 285

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 9e-06
 Identities = 6/28 (21%), Positives = 15/28 (53%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++   +P   +  E+ +TL +  +A+ I
Sbjct: 296 IVICCSPSSYNESETKSTLLFGQRAKTI 323

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

 Score =  126 bits (316), Expect = 3e-35
 Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 8/236 (3%)

Query: 9   QSHIEESLATLRYALQARNIFEKIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFD 68
              ++E +      + A        T   +       +          GIIPR  HQ+F+
Sbjct: 70  CPILDEVIMGYNCTIFAYGQTGTGKT-FTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFE 128

Query: 69  QIPS-NMVAQVKISYLEIYNEFVYDLLS-----SERKALKVRESPDTGIFVSDLSVHGVS 122
           ++        VK+S LEIYNE ++DLL+     SER  +        G+ +  L    V 
Sbjct: 129 KLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVH 188

Query: 123 SFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVD 181
           +  E+ + L +G   R TA+T MN  SSRSHS+F + + + E         K  ++NLVD
Sbjct: 189 NKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVD 248

Query: 182 LAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNSTLTYLLK 237
           LAGSE + ++ A ++R +E  NIN SL+TLG+VIT L + +   PYR S LT +L+
Sbjct: 249 LAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 304

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 23/28 (82%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           ++ATI+P   ++EE+L+TL YA +A+NI
Sbjct: 315 IIATISPASLNLEETLSTLEYAHRAKNI 342

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

 Score =  122 bits (307), Expect = 7e-34
 Identities = 93/217 (42%), Positives = 126/217 (58%), Gaps = 23/217 (10%)

Query: 40  HFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP----SNMVAQVKISYLEIYNEFVYDLLS 95
            ++MMG           GIIP+ C  LF +I      NM   V++SY+EIY E V DLL+
Sbjct: 101 SYTMMGKQEKDQ----QGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLN 156

Query: 96  S-ERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHS 154
              +  L+VRE P  G +V DLS   V+S++++Q  +  GNK R  A+TNMN+ SSRSH+
Sbjct: 157 PKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHA 216

Query: 155 IFQIQLTLTEDT--GSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLG 212
           +F I  T        +  T+K S+I+LVDLAGSER   T A   R KEG NIN SL TLG
Sbjct: 217 VFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLG 276

Query: 213 QVITNLSDHSAVP------------PYRNSTLTYLLK 237
           +VI+ L++  + P            PYR+S LT+LL+
Sbjct: 277 KVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR 313

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

 Score = 40.7 bits (94), Expect = 7e-05
 Identities = 11/26 (42%), Positives = 20/26 (76%)

Query: 1   MLATINPLQSHIEESLATLRYALQAR 26
           M+A ++P   + +E+L+TLRYA +A+
Sbjct: 324 MVAALSPADINYDETLSTLRYADRAK 349

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

 Score =  111 bits (277), Expect = 1e-29
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 20/221 (9%)

Query: 35  NEFVFHFSMMGDNLDSSL-KETTGIIPRFCHQLFDQIP----SNMVAQVKISYLEIYNEF 89
           N  +F +   G     ++     GIIP     +F+ I          +V   ++EIYNE 
Sbjct: 83  NVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNEN 142

Query: 90  VYDLLSSERKALK----------VRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARA 139
           + DLL S+    +            +       +++++   + S   ++  L + NK R+
Sbjct: 143 IVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRS 202

Query: 140 TASTNMNDKSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFK 199
           TAST  N+ SS SHSIF I L+ +     +       +NLVDLAGSER+  ++   +R +
Sbjct: 203 TASTASNEHSSASHSIFIIHLSGSNA--KTGAHSYGTLNLVDLAGSERINVSQVVGDRLR 260

Query: 200 EGRNINLSLMTLGQVITNLSDHSAVP---PYRNSTLTYLLK 237
           E +NIN SL  LG VI  L    +     P+RNS LTYLL+
Sbjct: 261 ETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQ 301

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

 Score = 43.8 bits (102), Expect = 6e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M   I+P  SHI E+L +LR+A +  + 
Sbjct: 312 MFVNISPSSSHINETLNSLRFASKVNST 339

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

 Score =  111 bits (277), Expect = 2e-29
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 13/203 (6%)

Query: 40  HFSMMGDNLDSSLKETTGIIPRFCHQLFDQI----PSNMVAQVKISYLEIYNEFVYDLLS 95
             +M GD    S   + GI       +F         N+  +V +++ EIYN  V+DL  
Sbjct: 128 THTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDL-L 186

Query: 96  SERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSI 155
           +++  L+V E     + V  L  + V+   ++ K ++ G+  R +  T  N  SSRSH+ 
Sbjct: 187 NKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHAC 246

Query: 156 FQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTK-ATEERFKEGRNINLSLMTLGQV 214
           FQI L           +   + +LVDLAG+ER A T  A  +   EG  IN SL+ L + 
Sbjct: 247 FQILLRTKG-------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKEC 299

Query: 215 ITNLSDHSAVPPYRNSTLTYLLK 237
           I  L  + A  P+R S LT +L+
Sbjct: 300 IRALGQNKAHTPFRESKLTQVLR 322

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNI 28
           M+A I+P  S  E +L TLRYA + + +
Sbjct: 334 MIAMISPGISSCEYTLNTLRYADRVKEL 361

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

 Score =  108 bits (270), Expect = 1e-28
 Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 6/188 (3%)

Query: 54  ETTGIIPRFCHQLFDQI---PSNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTG 110
           +  G+IPR   Q+F  I    +N+   V++SY+EIY E + DLL+ +   L V E  + G
Sbjct: 106 DGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRG 165

Query: 111 IFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSV 170
           ++V  L    VSS  E+ + +  G  ARA A+TNMN +SSRSHSIF I  T+T+    + 
Sbjct: 166 VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVI--TITQKNVETG 223

Query: 171 TQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSD-HSAVPPYRN 229
           + K  Q+ LVDLAGSE+V +T A+ +  +E + IN SL  LG VI  L+D  S+  PYR+
Sbjct: 224 SAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRD 283

Query: 230 STLTYLLK 237
           S LT +L+
Sbjct: 284 SKLTRILQ 291

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           ++   +P   +  E+L+TLR+ ++A++I  K   N 
Sbjct: 302 LIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNA 337

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  107 bits (267), Expect = 2e-28
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 10/198 (5%)

Query: 44  MGDNLDSSLKETTGIIPRFCHQLFDQIPSNMVA---QVKISYLEIYNEFVYDLLSSERKA 100
           M  +      +T GI       +F  +          + IS+ EIY   +YDLL  +RK 
Sbjct: 102 MLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQ-KRKM 160

Query: 101 LKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQL 160
           +   E+    + V DL +  V +  E+   + +G   R     + ND+SSRSH+I  I L
Sbjct: 161 VAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDL 220

Query: 161 TLTEDTGSSVTQKCSQINLVDLAGSERVAQTKAT-EERFKEGRNINLSLMTLGQVITNLS 219
                   +      +I  +DLAGSER A T +  ++   +G NIN SL+ L + I  + 
Sbjct: 221 K-----DINKNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMD 275

Query: 220 DHSAVPPYRNSTLTYLLK 237
                 P+R+S LT +L+
Sbjct: 276 SDKNHIPFRDSELTKVLR 293

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 1   MLATINPLQSHIEESLATLRYALQARN 27
           M+A I+P  S  E++L TLRY+ + +N
Sbjct: 304 MIANISPTISCCEQTLNTLRYSSRVKN 330

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  103 bits (257), Expect = 1e-26
 Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 18/206 (8%)

Query: 38  VFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS----NMVAQVKISYLEIYNEFVYDL 93
              ++M G           G+IPR    LFD I          ++K ++LEIYNE +YDL
Sbjct: 137 GKTYTMDGVPES------VGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDL 190

Query: 94  LSSERKALK--VRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSR 151
           LS+E+K ++  + ++    I+VS+++   V   + ++  +      RATAST  N++SSR
Sbjct: 191 LSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSR 250

Query: 152 SHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTL 211
           SH++ +++L         +      INLVDLA     +++  T  R  E +NIN SL  L
Sbjct: 251 SHAVTKLELIGRHAEKQEI--SVGSINLVDLA----GSESPKTSTRMTETKNINRSLSEL 304

Query: 212 GQVITNLSDHSAVPPYRNSTLTYLLK 237
             VI  L       PYRNS LT+LL 
Sbjct: 305 TNVILALLQKQDHIPYRNSKLTHLLM 330

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 40.7 bits (94), Expect = 8e-05
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 1   MLATINPLQSHIEESLATLRYALQARN 27
           M   ++P Q   +ES+ +LR+A    +
Sbjct: 341 MFINVSPFQDCFQESVKSLRFAASVNS 367

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

 Score = 92.4 bits (228), Expect = 1e-22
 Identities = 57/186 (30%), Positives = 101/186 (54%), Gaps = 8/186 (4%)

Query: 58  IIPRFCHQLFDQIPSNMV---AQVKISYLEIYNEFVYDLLS---SERKALKVRESPDTGI 111
           + PR   +LF  +  +       +K   +E+Y + + DLL    ++R  L +++     +
Sbjct: 101 LTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMV 160

Query: 112 FVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSSRSHSIFQIQLTLTEDTGSSVT 171
            V +++V  +S++ E++  +  G++ R T  T MN++SSRSH I  + +  T     ++ 
Sbjct: 161 SVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIA 220

Query: 172 QKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRNST 231
               +++ VDLAGSERV ++ +   + KE ++IN SL  LG VI+ LS  +   PYRN  
Sbjct: 221 --RGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHK 278

Query: 232 LTYLLK 237
           LT L+ 
Sbjct: 279 LTMLMS 284

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

 Score = 44.2 bits (103), Expect = 6e-06
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 1   MLATINPLQSHIEESLATLRYALQARNIFEKIGTNE 36
           M   I+P +S+++E+  +L YA + R+I      N 
Sbjct: 295 MFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNV 330

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1v8ka_	362	Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090	100.0
d1sdma_	364	Kinesin heavy chain-like protein {Potato (Solanum	100.0
d1bg2a_	323	Kinesin {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1x88a1	345	Kinesin {Human (Homo sapiens), mitotic kinesin eg5	100.0
d2zfia1	349	Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090	100.0
d1ry6a_	330	Kinesin {Malaria parasite (Plasmodium falciparum)	100.0
d1goja_	354	Kinesin {Neurospora crassa [TaxId: 5141]}	100.0
d2ncda_	368	Kinesin motor Ncd (non-claret disjunctional) {Frui	100.0
d1f9va_	342	Kinesin motor Ncd (non-claret disjunctional) {Bake	100.0
d1f9va_	342	Kinesin motor Ncd (non-claret disjunctional) {Bake	97.09

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

Probab=100.00  E-value=7.5e-55  Score=377.17  Aligned_cols=224  Identities=30%  Similarity=0.392  Sum_probs=172.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS   72 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~   72 (237)
                      ..+||++|.....+  +|+..++|+++++           |++||||||||+|+........++||+||++++||..+++
T Consensus        81 ~f~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~  160 (362)
T d1v8ka_          81 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQ  160 (362)
T ss_dssp             EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTS
T ss_pred             eEeCCeecCCCCCHHHHHHHHHHHHHHHHHhccCceEEeeccCCCCCceeeeecCCCCcccccCCeeeehhhhHHHHhhc
Confidence            35689999666544  9999999977765           7777777777777653332235789999999999998865


Q ss_pred             C----ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCC
Q psy17371         73 N----MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDK  148 (237)
Q Consensus        73 ~----~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~  148 (237)
                      .    .++.|++||+|||+|+++|||++ .....+++++..++++.|++++.|.|++|++.++..|.++|...++.+|..
T Consensus       161 ~~~~~~~~~v~vS~~EIyne~i~DLL~~-~~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~  239 (362)
T d1v8ka_         161 PRYRNLNLEVYVTFFEIYNGKVFDLLNK-KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSN  239 (362)
T ss_dssp             HHHHTTCCEEEEEEEEEETTEEEETTTT-TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------C
T ss_pred             ccccccchhheeeeeeecCCeEEecccC-CccccccccccCCcccCCCEEEEecCHHHHHHHHhccccccccccccCccc
Confidence            3    68999999999999999999987 445778899999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCc-hhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        149 SSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKA-TEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       149 ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~-~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      |||||+||++.+.+..       ...++|+||||||+||..+... .+.+.+|+..||+||++|++||.+|+++++||||
T Consensus       240 SSRSH~i~~i~i~~~~-------~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPy  312 (362)
T d1v8ka_         240 SSRSHACFQILLRTKG-------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPF  312 (362)
T ss_dssp             CCSSEEEEEEEEESSS-------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------C
T ss_pred             CcceeeEEEEEEEecc-------eeeeeEeeeecccccccccccccchhhhhhhhhhcccHHHHHHHHHHHhcCCCcCCC
Confidence            9999999999998432       4578999999999999887644 4467779999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       313 R~SkLT~lLk  322 (362)
T d1v8ka_         313 RESKLTQVLR  322 (362)
T ss_dssp             CCCHHHHHTT
T ss_pred             ccCHHHHhhh
Confidence            9999999997

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=100.00  E-value=6.1e-55  Score=378.14  Aligned_cols=222  Identities=28%  Similarity=0.458  Sum_probs=188.4

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhh-----------cCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEK-----------IGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~-----------~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      .+||++|.....+  +|+. +.|+++.           ||++||||||||+|+.      +++||+||++++||+.+.+.
T Consensus        44 f~FD~vf~~~~~q~~vy~~-v~~lv~~~l~G~n~~i~aYGqTGSGKTyTm~G~~------~~~Giipr~~~~lf~~i~~~  116 (364)
T d1sdma_          44 HMYDRVFDGNATQDDVFED-TKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAD------SNPGLTPRAMSELFRIMKKD  116 (364)
T ss_dssp             EECSEEECTTCCHHHHHHT-TTHHHHHHHTTCEEEEEEECSTTSSHHHHHTBCS------SSBCHHHHHHHHHHHHHHHG
T ss_pred             EECCeecCCCCCHHHHHHH-HHHHHHHHhcCCceeeeccccCCCCcccccccCc------cccchhHHHHHHHHhhhhhc
Confidence            4577777544433  7765 4565554           4888888888888887      88999999999999887543


Q ss_pred             ---ceEEEEEEEEEEeccccccccccc---cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         74 ---MVAQVKISYLEIYNEFVYDLLSSE---RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        74 ---~~~~v~vS~~EIy~e~v~DLL~~~---~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                         ..+.|++||+|||+|+++|||++.   ...+.+++++.++++++|++++.|.+++|++.++..|.++|...++.+|.
T Consensus       117 ~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~  196 (364)
T d1sdma_         117 SNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNE  196 (364)
T ss_dssp             GGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTC
T ss_pred             cccccceEEEEEEEEeccccccccCcccccccccceeecccCccccccceeeeeCCHHHHHHHhhccceeeccccccccc
Confidence               789999999999999999999875   34678899999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      .|||||+||++++.+.......  ...|+|+||||||+||....++.|.+++|+..||+||++|++||.+|+++++||||
T Consensus       197 ~ssRsH~i~~i~v~~~~~~~~~--~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipy  274 (364)
T d1sdma_         197 QSSRSHLIVSVIIESTNLQTQA--IARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPY  274 (364)
T ss_dssp             HHHHSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCG
T ss_pred             cccccceEEEEEEEEeccCcce--eeeEEEEeechhhccccccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCc
Confidence            9999999999999988754433  57899999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      ||||||+|||
T Consensus       275 R~SkLT~lL~  284 (364)
T d1sdma_         275 RNHKLTMLMS  284 (364)
T ss_dssp             GGCHHHHHTT
T ss_pred             hhhhhhHHHH
Confidence            9999999997

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-54  Score=369.57  Aligned_cols=227  Identities=35%  Similarity=0.483  Sum_probs=205.1

Q ss_pred             CcccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC-
Q psy17371          6 NPLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP-   71 (237)
Q Consensus         6 ~~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~-   71 (237)
                      ..+||++|.....+  +|+..++|+++++           |++||||||||+|+..+.   ...||+||++++||+.+. 
T Consensus        43 ~f~FD~vf~~~~~q~~vf~~~~~~lv~~~l~G~n~~i~aYGqtgSGKTyT~~G~~~~~---~~~gii~r~l~~l~~~~~~  119 (323)
T d1bg2a_          43 PYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDP---EGMGIIPRIVQDIFNYIYS  119 (323)
T ss_dssp             EEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCT---TTBCHHHHHHHHHHHHHHH
T ss_pred             eeECCEEECCCCCHHHHHHHHHHHHHHHHHcCCCcceeeecccCCCCceeccCCcccc---cccchhhhHHHHHHhhhhc
Confidence            35688898655544  8999988877654           888888888888877554   668999999999998774 


Q ss_pred             --CCceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         72 --SNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        72 --~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                        +..++.|.+||+|||+|+++|||.+....+.+++++.++++++|++++.|.+++++..++..|.++|....+..|..|
T Consensus       120 ~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~s  199 (323)
T d1bg2a_         120 MDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHS  199 (323)
T ss_dssp             HCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEECTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHH
T ss_pred             cccccceEEEEEEEEEEcCcccccccccccceeEeeccccceeecCCEEEEEeccHhHhHHhhhcccceeecccCCCCCC
Confidence              347899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPYRN  229 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpyrd  229 (237)
                      ||||+||++++.+.+.....  ...|+|+||||||+|+..+.+..+.+++|+..||+||++|++||.+|+++++|||||+
T Consensus       200 sRsh~i~~i~v~~~~~~~~~--~~~s~l~~vDLAGse~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~~~~iPyR~  277 (323)
T d1bg2a_         200 SRSHSIFLINVKQENTQTEQ--KLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRD  277 (323)
T ss_dssp             HHSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGG
T ss_pred             CccceEEEEEEEEEeCCCCc--EEEEEEEEEecccccccccccchhhhhhhhhcccccHHHHHHHHHHHhcCCCccCCcc
Confidence            99999999999998754433  5689999999999999999998889999999999999999999999999999999999


Q ss_pred             chhhhhcC
Q psy17371        230 STLTYLLK  237 (237)
Q Consensus       230 SkLT~lLq  237 (237)
                      ||||+|||
T Consensus       278 SkLT~lL~  285 (323)
T d1bg2a_         278 SKMTRILQ  285 (323)
T ss_dssp             SHHHHHGG
T ss_pred             CHHHHHHH
Confidence            99999996

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

Probab=100.00  E-value=3.5e-54  Score=371.30  Aligned_cols=231  Identities=34%  Similarity=0.488  Sum_probs=183.3

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCC-----CCCccccchhHHHhhc
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSL-----KETTGIIPRFCHQLFD   68 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~-----~~~~Gii~r~~~~Lf~   68 (237)
                      .+||++|.....+  +|+..+.|+++.+           |++||||||||+|+..+...     ...+||+||++++||+
T Consensus        49 f~FD~vf~~~~~q~~vy~~~~~~lv~~~l~G~n~~i~aYGqtgSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~  128 (345)
T d1x88a1          49 YTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFE  128 (345)
T ss_dssp             EECSEEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHH
T ss_pred             EecCEEeCCCCCHHHHHHHHHHHhHHHHhccCCceEEeeeeccccceEEeeecCCcccccccccCccCCcHHHHHHHHHH
Confidence            4678888655544  8998888876654           88888888888877633211     2347999999999999


Q ss_pred             cCCCC-ceEEEEEEEEEEecccccccccccc-----ccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCcccc
Q psy17371         69 QIPSN-MVAQVKISYLEIYNEFVYDLLSSER-----KALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATAS  142 (237)
Q Consensus        69 ~~~~~-~~~~v~vS~~EIy~e~v~DLL~~~~-----~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~  142 (237)
                      .+... ..+.|++||+|||+|+++|||++..     ......++..++++++|++++.|.|++|++++|..|.++|...+
T Consensus       129 ~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~  208 (345)
T d1x88a1         129 KLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAA  208 (345)
T ss_dssp             HTSSSSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHH
T ss_pred             hhhccCceEEEEEEEEEEECCeeEECCCCCCcccccceeeecccCCCCEEEcCCEEEEeCCHHHHHHHHHhhhccccccc
Confidence            88765 7899999999999999999998652     22344455567899999999999999999999999999999999


Q ss_pred             CCCCCCCCCceEEEEEEEEEEe-cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcC
Q psy17371        143 TNMNDKSSRSHSIFQIQLTLTE-DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDH  221 (237)
Q Consensus       143 ~~~n~~ssrsH~v~~i~v~~~~-~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~  221 (237)
                      +.+|..|||||+||+|++.... ..........|+|+||||||+|+..+....+.+++|...||+||++|++||.+|+++
T Consensus       209 t~~n~~SsRsH~i~~i~i~~~~~~~~~~~~~~~s~l~~vDLAGsEr~~~~~~~~~~~~e~~~in~Sl~~L~~vi~al~~~  288 (345)
T d1x88a1         209 TLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVER  288 (345)
T ss_dssp             HHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTT
T ss_pred             cCccccccccceEEEEEEEEeeccCCCCCceEeeeEEEEecCCccccccccchhhhhcccccccchHHHHHHHHHHHhcC
Confidence            9999999999999999999876 334444467899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchhhhhcC
Q psy17371        222 SAVPPYRNSTLTYLLK  237 (237)
Q Consensus       222 ~~~vpyrdSkLT~lLq  237 (237)
                      ++||||||||||+|||
T Consensus       289 ~~~iPyR~SkLT~lL~  304 (345)
T d1x88a1         289 TPHVPYRESKLTRILQ  304 (345)
T ss_dssp             CSCCCGGGSHHHHHTG
T ss_pred             CCcCCCccCHHHHHhH
Confidence            9999999999999997

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

Probab=100.00  E-value=2e-53  Score=367.01  Aligned_cols=227  Identities=42%  Similarity=0.621  Sum_probs=187.5

Q ss_pred             cccchhhhh----------hhhHHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHH
Q psy17371          7 PLQSHIEES----------LATLRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQ   65 (237)
Q Consensus         7 ~~~~~~~~~----------~~~~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~   65 (237)
                      -+||++|..          .+..+|+..+.|+++.+           |++||||||||+|+..    ..++|||||++++
T Consensus        47 f~FD~vf~~~~~~~~~~~~sQ~~vy~~~~~plv~~~l~G~n~ti~aYGqTgSGKT~Tm~G~~~----~~~~Glipr~l~~  122 (349)
T d2zfia1          47 FSFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE----KDQQGIIPQLCED  122 (349)
T ss_dssp             EECSEEEECSSCTTSSSCCCHHHHHHHTHHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSG----GGCBCHHHHHHHH
T ss_pred             EEeceEeCCCCCccccccccHHHHHHHhhHHHHHHHHhccCceeeeeccCCCCCceeeccCcc----ccccCchHHHHhh
Confidence            356666643          23448888888866554           7777777777777641    1478999999999


Q ss_pred             hhccCCC----CceEEEEEEEEEEeccccccccccc-cccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCcc
Q psy17371         66 LFDQIPS----NMVAQVKISYLEIYNEFVYDLLSSE-RKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARAT  140 (237)
Q Consensus        66 Lf~~~~~----~~~~~v~vS~~EIy~e~v~DLL~~~-~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~  140 (237)
                      ||+.++.    ...+.|.+||+|||+|+++|||++. ...+.+++++.+++++.|++++.|.+++|+..+|..|..+|..
T Consensus       123 lf~~~~~~~~~~~~~~v~~S~~Eiyne~i~DLL~~~~~~~~~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~  202 (349)
T d2zfia1         123 LFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTV  202 (349)
T ss_dssp             HHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTS
T ss_pred             hhhhccccccCCcceEEEEEeeeeeCCEEEecccccccCCceEEecCCCCcEEEEeEEEeccCHHHHHHHHHhcccCeEe
Confidence            9987743    3789999999999999999999975 5678999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCceEEEEEEEEEEe--cCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHh
Q psy17371        141 ASTNMNDKSSRSHSIFQIQLTLTE--DTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNL  218 (237)
Q Consensus       141 ~~~~~n~~ssrsH~v~~i~v~~~~--~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL  218 (237)
                      ..+.+|..|+|+|++|++.+.+..  ..........|+|+||||||+|+....+..+.+++|+..||+||++|++||.+|
T Consensus       203 ~~t~~n~~ssrsh~i~~i~i~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~e~~~IN~SL~~L~~vi~aL  282 (349)
T d2zfia1         203 AATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISAL  282 (349)
T ss_dssp             GGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCccccccccceEEEEEEEEecccCCCcccceeeEEEEeecccchhhhhcCCcccchhhccchhhHHHHHHHHHHHH
Confidence            999999999999999999999876  333344456799999999999999999999999999999999999999999999


Q ss_pred             hcCC------------CCCCCCCchhhhhcC
Q psy17371        219 SDHS------------AVPPYRNSTLTYLLK  237 (237)
Q Consensus       219 ~~~~------------~~vpyrdSkLT~lLq  237 (237)
                      ++.+            .||||||||||+|||
T Consensus       283 ~~~~~~~~~~~~~~~~~~IPyR~SkLT~lL~  313 (349)
T d2zfia1         283 AEMDSGPNKNKKKKKTDFIPYRDSVLTWLLR  313 (349)
T ss_dssp             HHHC--------------CCGGGSHHHHHTG
T ss_pred             HhhhcccccccccCCCCccCCcCCHHHHHHH
Confidence            7532            499999999999997

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-53  Score=362.83  Aligned_cols=224  Identities=27%  Similarity=0.384  Sum_probs=182.7

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhh------------hcCcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCC-
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFE------------KIGTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIP-   71 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~------------~~G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~-   71 (237)
                      .+||+||.....+  +|+..++|+++            +||++||||||||+|+..... .+++||+||++++||+.++ 
T Consensus        52 F~fD~Vf~~~~~q~~vy~~~~~plv~~~~~~G~n~~i~aYGqTGSGKTyTm~G~~~~~~-~~~~Giipr~~~~lf~~~~~  130 (330)
T d1ry6a_          52 FIVDKVFDDTVDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTMLGSQPYGQ-SDTPGIFQYAAGDIFTFLNI  130 (330)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHHHBSSSTTT-SSCBCHHHHHHHHHHHHHHH
T ss_pred             EeCCeecCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEeeeccccccceeeeccccccc-ccCCCchhHHHhhhhhhhhh
Confidence            3578888644433  88888887543            238888888888888753221 2578999999999998763 


Q ss_pred             --CCceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCC
Q psy17371         72 --SNMVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKS  149 (237)
Q Consensus        72 --~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~s  149 (237)
                        ....+.|.+||+|||+|+++|||++. +.+.+++++.++++++|++++.|.+++|++.++..|..+|....+.+|..|
T Consensus       131 ~~~~~~~~v~~S~~EIyne~i~DLL~~~-~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~s  209 (330)
T d1ry6a_         131 YDKDNTKGIFISFYEIYCGKLYDLLQKR-KMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDES  209 (330)
T ss_dssp             HCSSSCEEEEEEEEEEETTEEEESCCC------------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGG
T ss_pred             hcccceEEEEEEEEeeeccccccccccc-ccceeeecCCCCccccCceEEEEeeccchhhhhhccccccccccccccccc
Confidence              34788999999999999999999874 567788899999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHH-HHHHHHHhHHHHHHHHHHHHhhcCCCCCCCC
Q psy17371        150 SRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEER-FKEGRNINLSLMTLGQVITNLSDHSAVPPYR  228 (237)
Q Consensus       150 srsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~-~~e~~~in~sl~~L~~vi~aL~~~~~~vpyr  228 (237)
                      ||||+||++++......     ...|+|+||||||+|+..++...+.. ..|+..||+||.+|++||.+|++++.|||||
T Consensus       210 sRsh~i~~i~v~~~~~~-----~~~s~l~~vDLAGsEr~~~~~~~~~~~~~e~~~IN~sL~~L~~vi~al~~~~~~iPyR  284 (330)
T d1ry6a_         210 SRSHAILNIDLKDINKN-----TSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFR  284 (330)
T ss_dssp             GGSEEEEEEEEEETTTT-----EEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGG
T ss_pred             CCcceEEEEEEEecccc-----cccceeeeecccccccccccccCCchhhhhhhhhhHHHHHHHHHHHHHhcCCCcCCCc
Confidence            99999999999865421     35799999999999999887766655 4699999999999999999999999999999


Q ss_pred             CchhhhhcC
Q psy17371        229 NSTLTYLLK  237 (237)
Q Consensus       229 dSkLT~lLq  237 (237)
                      |||||+|||
T Consensus       285 ~SkLT~lL~  293 (330)
T d1ry6a_         285 DSELTKVLR  293 (330)
T ss_dssp             GCHHHHHTG
T ss_pred             cCHHHHHHH
Confidence            999999997

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

Probab=100.00  E-value=2.6e-53  Score=366.91  Aligned_cols=227  Identities=37%  Similarity=0.546  Sum_probs=202.1

Q ss_pred             cccchhhhhhhh--HHHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCCC
Q psy17371          7 PLQSHIEESLAT--LRYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPSN   73 (237)
Q Consensus         7 ~~~~~~~~~~~~--~~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~~   73 (237)
                      .+||++|.....  .+|+..++|+++++           |++||||||||+|.....  .+.+|||||++++||+.+...
T Consensus        48 f~FD~vf~~~~~q~~vy~~~~~plv~~~l~G~n~ti~aYG~tgSGKT~Tm~G~~~~~--~~~~Giipr~l~~l~~~~~~~  125 (354)
T d1goja_          48 FTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDD--PDGRGVIPRIVEQIFTSILSS  125 (354)
T ss_dssp             EECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHHTBSCTTS--TTTBCHHHHHHHHHHHHHHTS
T ss_pred             EECCeEcCCCCCHHHHHHHHHHHHHHHhhccCceeEEecccCCCCcceeeecccccC--cccceecchhHHHHhhhhccc
Confidence            578889855543  39999999877654           888888888888865321  256899999999999876443


Q ss_pred             ---ceEEEEEEEEEEeccccccccccccccceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCCCCC
Q psy17371         74 ---MVAQVKISYLEIYNEFVYDLLSSERKALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMNDKSS  150 (237)
Q Consensus        74 ---~~~~v~vS~~EIy~e~v~DLL~~~~~~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~~ss  150 (237)
                         .++.|++||+|||+|+++|||++....+.+++++.+++++.+++++.|.+++++..++..|..+|...++.+|..||
T Consensus       126 ~~~~~~~v~vS~~EIyne~i~DLL~~~~~~l~~~e~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ss  205 (354)
T d1goja_         126 AANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESS  205 (354)
T ss_dssp             CTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred             ccCceEEEEeehhheecceEeecccccccceeeeeecCCCEeecCceeecchhHHHHHHHHhhccccccccccccccccc
Confidence               68999999999999999999999988999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCCCCCC
Q psy17371        151 RSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS-AVPPYRN  229 (237)
Q Consensus       151 rsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~-~~vpyrd  229 (237)
                      |||+||++++.+.......  ...++|+||||||+|+..+.+..+.+++|+..||+||.+|++||.+|++++ +||||||
T Consensus       206 RsH~i~~i~v~~~~~~~~~--~~~s~l~~vDLAGsE~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~iPyR~  283 (354)
T d1goja_         206 RSHSIFVITITQKNVETGS--AKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRD  283 (354)
T ss_dssp             GCEEEEEEEEEEEETTTTE--EEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGG
T ss_pred             ccceEEEEEEEEeecCCCC--eEEEEEEEeeccCcccccccCCccchhhhhhhhhHHHHHHHHHHHHHhcCCCCcCCccc
Confidence            9999999999998755443  578999999999999999999999999999999999999999999999876 6999999


Q ss_pred             chhhhhcC
Q psy17371        230 STLTYLLK  237 (237)
Q Consensus       230 SkLT~lLq  237 (237)
                      ||||+|||
T Consensus       284 SkLT~lLk  291 (354)
T d1goja_         284 SKLTRILQ  291 (354)
T ss_dssp             CHHHHHTG
T ss_pred             CHHHHHHH
Confidence            99999997

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.5e-51  Score=355.79  Aligned_cols=218  Identities=34%  Similarity=0.484  Sum_probs=179.5

Q ss_pred             cccchhhhhhhhH--HHHHHhhhhhhhc-----------CcceeeeEeeeecCCCCCCCCCCccccchhHHHhhccCCC-
Q psy17371          7 PLQSHIEESLATL--RYALQARNIFEKI-----------GTNEFVFHFSMMGDNLDSSLKETTGIIPRFCHQLFDQIPS-   72 (237)
Q Consensus         7 ~~~~~~~~~~~~~--~y~~~~~~i~~~~-----------G~~~sgktyt~~G~~~~~~~~~~~Gii~r~~~~Lf~~~~~-   72 (237)
                      .+||++|.....+  +|+. +.|+++++           |++||||||||+|+.      .++||+||++++||+.++. 
T Consensus        94 F~FD~vf~~~~~Q~~Vy~~-v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~------~~~Giipr~~~~Lf~~~~~~  166 (368)
T d2ncda_          94 FSFDQVFHPLSSQSDIFEM-VSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVP------ESVGVIPRTVDLLFDSIRGY  166 (368)
T ss_dssp             EECSEEECTTCCHHHHHTT-THHHHHHHHTTCEEEEEEECSTTSSHHHHHTEET------TEECHHHHHHHHHHHHHHHH
T ss_pred             eECCeEECCCCCccchHHH-HHHHHHHHhcccceeEEeeccCCCccceEecccc------cccchhhHHHHHHhhhhhhh
Confidence            3567777544433  7753 44655543           888888888888877      7899999999999987753 


Q ss_pred             ---CceEEEEEEEEEEeccccccccccccc--cceeeecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         73 ---NMVAQVKISYLEIYNEFVYDLLSSERK--ALKVRESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        73 ---~~~~~v~vS~~EIy~e~v~DLL~~~~~--~~~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                         ...+.|.+||+|||+|+++|||++...  ...+.+++.+++.++|++++.+.+++++..++..|.++|....+.+|.
T Consensus       167 ~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~  246 (368)
T d2ncda_         167 RNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNE  246 (368)
T ss_dssp             HTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTT
T ss_pred             ccccccceEEEEEEEEecceeecccccccccccceeeccccccccccccceeccCCHHHHHHHHHHHHhhcccccccccc
Confidence               368999999999999999999998743  455668889999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCCC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHSAVPPY  227 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~vpy  227 (237)
                      .|||||+||++++.+.......  ...|+|+||||||+|+...    +.+++|+..||+||++|++||.+|+++++||||
T Consensus       247 ~ssrSh~i~~i~v~~~~~~~~~--~~~s~l~~VDLAGse~~~~----~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPy  320 (368)
T d2ncda_         247 RSSRSHAVTKLELIGRHAEKQE--ISVGSINLVDLAGSESPKT----STRMTETKNINRSLSELTNVILALLQKQDHIPY  320 (368)
T ss_dssp             TTTTCEEEEEEEEEEECTTSCC--EEEEEEEEEECCCCCCC--------------CTTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred             cccccceEEEEEEEEEecCCCc--eEeeeeeeeeeccccccch----hhhhcccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence            9999999999999988754433  5789999999999998754    467899999999999999999999999999999


Q ss_pred             CCchhhhhcC
Q psy17371        228 RNSTLTYLLK  237 (237)
Q Consensus       228 rdSkLT~lLq  237 (237)
                      |+||||+|||
T Consensus       321 R~SkLT~lL~  330 (368)
T d2ncda_         321 RNSKLTHLLM  330 (368)
T ss_dssp             GGSHHHHHHG
T ss_pred             cCCHHHHHHH
Confidence            9999999996

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

Probab=100.00  E-value=9.5e-51  Score=349.31  Aligned_cols=228  Identities=32%  Similarity=0.460  Sum_probs=173.4

Q ss_pred             cccchhhhhhhh--HHHHHHhhhhhhhc--CcceeeeEeeeecCCCCCCC-CCCccccchhHHHhhccCCC----CceEE
Q psy17371          7 PLQSHIEESLAT--LRYALQARNIFEKI--GTNEFVFHFSMMGDNLDSSL-KETTGIIPRFCHQLFDQIPS----NMVAQ   77 (237)
Q Consensus         7 ~~~~~~~~~~~~--~~y~~~~~~i~~~~--G~~~sgktyt~~G~~~~~~~-~~~~Gii~r~~~~Lf~~~~~----~~~~~   77 (237)
                      ..||++|.....  .+|+.. .|+++.+  |++++.++||+.|+||++++ .+++||+||++++||+.++.    ..++.
T Consensus        52 f~FD~vf~~~~~q~~vy~~v-~~~v~~~l~G~n~~i~aYGqtgSGKT~T~~G~~~Giipr~~~~lf~~~~~~~~~~~~~~  130 (342)
T d1f9va_          52 FKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYK  130 (342)
T ss_dssp             EEESEEECTTCCHHHHHHHH-HHHHGGGGGTCCEEEEEECCTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             eecCeEeCCCCCHHHHHHHh-hhhhcchhcccccceeeeeccCCccccccccCcCchhHHHHHHHHhhhhhhhccccccc
Confidence            357888854443  388753 4666654  55555555555555555544 34589999999999987753    36889


Q ss_pred             EEEEEEEEeccccccccccccc---------cceee-ecCCCCeeecCcEEEEecCHHHHHHHHHHHHhhCccccCCCCC
Q psy17371         78 VKISYLEIYNEFVYDLLSSERK---------ALKVR-ESPDTGIFVSDLSVHGVSSFSEMQKWLSEGNKARATASTNMND  147 (237)
Q Consensus        78 v~vS~~EIy~e~v~DLL~~~~~---------~~~i~-~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~n~  147 (237)
                      |.+||+|||+|+|+|||++...         ...++ ++..+++++.|++++.|.+++|+..++..|.++|...++.+|.
T Consensus       131 v~vS~~EIyne~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~N~  210 (342)
T d1f9va_         131 VNCEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNE  210 (342)
T ss_dssp             EEEEEEEEETTEEEETTC-------------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------C
T ss_pred             eeeeeeeeccCeeEECCCCCCCccccccccceeeeeecCCCCcEEEeeeEEEEecchHHHHHHHhhhhhccccccccccc
Confidence            9999999999999999987521         23344 4446779999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEEEEecCCCceeeeeeEEEEEEcCCCCCcCCcCchhHHHHHHHHHhHHHHHHHHHHHHhhcCC---CC
Q psy17371        148 KSSRSHSIFQIQLTLTEDTGSSVTQKCSQINLVDLAGSERVAQTKATEERFKEGRNINLSLMTLGQVITNLSDHS---AV  224 (237)
Q Consensus       148 ~ssrsH~v~~i~v~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~---~~  224 (237)
                      .|||||++|++++.+.+.....  ...|+|+||||||+|+.......+.+.+|+..||+||.+|++||.+|++++   +|
T Consensus       211 ~ssrSh~i~~i~v~~~~~~~~~--~~~s~l~~vDLAGse~~~~~~~~~~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~~~~  288 (342)
T d1f9va_         211 HSSASHSIFIIHLSGSNAKTGA--HSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRH  288 (342)
T ss_dssp             CGGGSEEEEEEEEEEECC--CC--EEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CC
T ss_pred             cCcccceeEEEEEEEecCCccc--eeeeeeeeeeccCCcccccccchhhhhhhhhhccHHHHHHHHHHHHHhcccCCCCc
Confidence            9999999999999988643332  568999999999999999999999999999999999999999999999754   59


Q ss_pred             CCCCCchhhhhcC
Q psy17371        225 PPYRNSTLTYLLK  237 (237)
Q Consensus       225 vpyrdSkLT~lLq  237 (237)
                      |||||||||+|||
T Consensus       289 iPyR~SkLT~lL~  301 (342)
T d1f9va_         289 IPFRNSKLTYLLQ  301 (342)
T ss_dssp             CCGGGSHHHHHHH
T ss_pred             CCCccCHHHHHHH
Confidence            9999999999996

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

Probab=97.09  E-value=1.4e-05  Score=66.33  Aligned_cols=43  Identities=14%  Similarity=0.123  Sum_probs=32.6

Q ss_pred             cCcccchhhhhhhhHH-HHHHhhh-hhhhcCcceeeeEeeeecCC
Q psy17371          5 INPLQSHIEESLATLR-YALQARN-IFEKIGTNEFVFHFSMMGDN   47 (237)
Q Consensus         5 ~~~~~~~~~~~~~~~~-y~~~~~~-i~~~~G~~~sgktyt~~G~~   47 (237)
                      -+++|+.||+.+++++ ....|.+ ++-+||++||||||||+|+.
T Consensus        60 ~~~~q~~vy~~v~~~v~~~l~G~n~~i~aYGqtgSGKT~T~~G~~  104 (342)
T d1f9va_          60 QQDTNVDVFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPG  104 (342)
T ss_dssp             TTCCHHHHHHHHHHHHGGGGGTCCEEEEEECCTTSSHHHHHHSTT
T ss_pred             CCCCHHHHHHHhhhhhcchhcccccceeeeeccCCccccccccCc
Confidence            3678999999888653 2223334 56779999999999999975