Psyllid ID: psy17505

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMKRQELLASYAREDEKAAQKK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHHcccEEccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHccccHHHEEEcHHHHHHHHccccHHHHHHHHHcccEEEccccccccHHHHHHHHHHHccccccHHHccccHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSSLKLQKRLAASVMRcgkkkvwldpneineIAITNSRQNIRKLIKDgliikkpvavhsRARTRKNKEarrkgrhcgfgkrkgtanarmpqkILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMKRQELLASYAREDEKAAQKK
Flexible Loop (DISEMBL)
msslklqkRLAASvmrcgkkkvwldpneineiaitnsrqNIRKLIKdgliikkpvavhsrartrknkearrkgrhcgfgkrkgtanarmpqkilwvnrMRVLRRLLKKYRqakkidkhlyhqlymkakgnvfknKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKvkeakkrreeriqmkrqellasyaredekaaqkk
Low Complexity Region (SEG)
MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQaearrqkvkeakkrreerIQMKRQELLASYAREDEKAAQKK
Disordered region (IsUnstruct)
**********AASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAV******************************RMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIH********************************************************
Disordered Region (DISOPRED)
****KLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAV*************************************WVNRMRVLRRLLKKY****KIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKK******************************************************
Disordered Region (DISEMBL)
MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAV*****************HCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKK******************************RIQMKRQELLASYA**********
Disordered Region (DISPRO)
**SLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVA******************************ARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARR********RR*ERIQMKRQELLASYAREDEK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLLASYAREDEKAAQKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	199	2.2.26 [Sep-21-2011]
P36241	203	60S ribosomal protein L19	yes	N/A	0.989	0.970	0.837	2e-86
P84100	196	60S ribosomal protein L19	yes	N/A	0.969	0.984	0.730	4e-72
Q5RB99	196	60S ribosomal protein L19	yes	N/A	0.969	0.984	0.730	4e-72
P84099	196	60S ribosomal protein L19	yes	N/A	0.969	0.984	0.730	4e-72
Q8HXN9	196	60S ribosomal protein L19	N/A	N/A	0.969	0.984	0.730	4e-72
P84098	196	60S ribosomal protein L19	yes	N/A	0.969	0.984	0.730	4e-72
D0VWQ5	196	60S ribosomal protein L19	yes	N/A	0.969	0.984	0.730	4e-72
Q3T0W9	196	60S ribosomal protein L19	yes	N/A	0.969	0.984	0.730	4e-72
Q7ZYS1	197	60S ribosomal protein L19	N/A	N/A	0.979	0.989	0.723	8e-72
Q9LUQ6	209	60S ribosomal protein L19	yes	N/A	0.889	0.846	0.679	6e-67

>sp|P36241|RL19_DROME 60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2

 Score =  318 bits (814), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 165/197 (83%), Positives = 181/197 (91%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIA TNSRQNIRKLIKDGLIIKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
            R RKN EARRKGRHCGFGKRKGTANARMP K+LW+ R RVLRRLLKKYR +KKID+HLY
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMK KGNVFKNKRVLME+IHKKKAEK R+K+L+DQAEARRQKV+EA+KRREERI  K
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180

Query: 181 RQELLASYAREDEKAAQ 197
           +QEL+A +A+EDE AA+
Sbjct: 181 KQELIALHAKEDEIAAK 197

Drosophila melanogaster (taxid: 7227)

>sp|P84100|RL19_RAT 60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Rattus norvegicus (taxid: 10116)

>sp|Q5RB99|RL19_PONAB 60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Pongo abelii (taxid: 9601)

>sp|P84099|RL19_MOUSE 60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Mus musculus (taxid: 10090)

>sp|Q8HXN9|RL19_MACFA 60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Macaca fascicularis (taxid: 9541)

>sp|P84098|RL19_HUMAN 60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Homo sapiens (taxid: 9606)

>sp|D0VWQ5|RL19_CANFA 60S ribosomal protein L19 OS=Canis familiaris GN=RPL19 PE=1 SV=1

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Canis familiaris (taxid: 9615)

>sp|Q3T0W9|RL19_BOVIN 60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1

 Score =  270 bits (691), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 170/193 (88%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

Bos taurus (taxid: 9913)

>sp|Q7ZYS1|RL19_XENLA 60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1

 Score =  269 bits (688), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 170/195 (87%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKL+KDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDEKA 195
           ++E++ S ++E+E  
Sbjct: 181 KEEIIKSLSKEEESG 195

Xenopus laevis (taxid: 8355)

>sp|Q9LUQ6|RL192_ARATH 60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1

 Score =  253 bits (646), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 123/181 (67%), Positives = 148/181 (81%), Gaps = 4/181 (2%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SLK+QKRLAASVM+CGK KVWLDPNE  +I++ NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R   EA+RKGRH G+GKRKGT  AR+P KILW+ RMRVLRR L KYR++KKID+H+Y
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKK----RREER 176
           H +YMK KGNVFKNKRVLME IHK KAEK+R K L+DQ EA+R K K +++    RREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 177 I 177
           +
Sbjct: 181 L 181

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
110671438	199	putative ribosomal protein L19e [Diaphor	1.0	1.0	1.0	1e-108
90820030	199	putative ribosomal protein L19e [Graphoc	1.0	1.0	0.874	2e-94
70909753	199	ribosomal protein L19e [Cicindela campes	1.0	1.0	0.874	6e-94
70909757	199	ribosomal protein L19e [Meladema coriace	1.0	1.0	0.874	1e-93
389608217	200	ribosomal protein L19 [Papilio xuthus] g	1.0	0.995	0.844	2e-91
309951488	200	ribosomal protein L19 [Antheraea yamamai	1.0	0.995	0.839	2e-91
268306430	200	ribosomal protein L19 [Manduca sexta]	1.0	0.995	0.839	3e-91
112984306	200	ribosomal protein L19 [Bombyx mori] gi|5	0.979	0.975	0.851	4e-91
342356421	200	ribosomal protein L19 [Heliconius melpom	1.0	0.995	0.834	8e-91
315115433	200	ribosomal protein L19 [Euphydryas aurini	1.0	0.995	0.834	1e-90

>gi|110671438|gb|ABG81970.1| putative ribosomal protein L19e [Diaphorina citri]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY
Sbjct: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK
Sbjct: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           RQELLASYAREDEKAAQKK
Sbjct: 181 RQELLASYAREDEKAAQKK 199

Source: Diaphorina citri

Species: Diaphorina citri

Genus: Diaphorina

Family: Psyllidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|90820030|gb|ABD98772.1| putative ribosomal protein L19e [Graphocephala atropunctata]

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/199 (87%), Positives = 186/199 (93%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS+LKLQKRLAASVM CG+KKVWLDPNEINEIA TNSRQNIRKLIKDGLIIKKPVAVHSR
Sbjct: 1   MSTLKLQKRLAASVMGCGRKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKRKGTANARMP+K+LWVNRMRVLRRLLKKYR+AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRKGTANARMPRKVLWVNRMRVLRRLLKKYREAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           HQLYMKAKGNVFKNKRVLMEFIHKKKAEK+R K+L+DQAEARR KVKEAKKRR ER+  K
Sbjct: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKARTKMLNDQAEARRLKVKEAKKRRAERLTQK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           +QELL SY +EDE AA KK
Sbjct: 181 KQELLQSYQKEDEAAAVKK 199

Source: Graphocephala atropunctata

Species: Graphocephala atropunctata

Genus: Graphocephala

Family: Cicadellidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|70909753|emb|CAJ17302.1| ribosomal protein L19e [Cicindela campestris]

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 174/199 (87%), Positives = 183/199 (91%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRKLIKDGLIIKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKRKGTANARMPQK LWV RMRVLRRLLKKYR+AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRKGTANARMPQKELWVQRMRVLRRLLKKYREAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IHKKKAEK+R K+L DQAEARR+KV EA+KRR ERI  K
Sbjct: 121 HSLYMKAKGNVFKNKRVLMEYIHKKKAEKARTKMLDDQAEARRRKVHEARKRRAERIVTK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           +QELL +Y REDE AA KK
Sbjct: 181 KQELLQTYQREDEAAATKK 199

Source: Cicindela campestris

Species: Cicindela campestris

Genus: Cicindela

Family: Carabidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|70909757|emb|CAJ17304.1| ribosomal protein L19e [Meladema coriacea]

 Score =  347 bits (890), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 174/199 (87%), Positives = 183/199 (91%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRKLIKDGLIIKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKRKGTANARMPQK LWV RMRVLRRLLKKYR+AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRKGTANARMPQKELWVQRMRVLRRLLKKYREAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IHKKKAEK+R K+L DQAEARR+K  EA+KRREERI  K
Sbjct: 121 HALYMKAKGNVFKNKRVLMEYIHKKKAEKARTKMLDDQAEARRRKKHEARKRREERIATK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           +QELL +Y REDE AA KK
Sbjct: 181 KQELLQTYQREDEAAAAKK 199

Source: Meladema coriacea

Species: Meladema coriacea

Genus: Meladema

Family: Dytiscidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608217|dbj|BAM17720.1| ribosomal protein L19 [Papilio xuthus] gi|389610715|dbj|BAM18969.1| ribosomal protein L19 [Papilio polytes]

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 168/199 (84%), Positives = 181/199 (90%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRK+IKDGL+IKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKR+GTANARMPQK LWV R RVLR+LL KYR AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IH+KKAEK+R K+LSDQAEARR KVKEA+KRREERI  K
Sbjct: 121 HALYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREERIAAK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           ++ELL S+AREDE A   K
Sbjct: 181 KEELLQSFAREDEAAVTAK 199

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|309951488|gb|ADO95159.1| ribosomal protein L19 [Antheraea yamamai]

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/199 (83%), Positives = 181/199 (90%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRK+IKDGL+IKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKR+GTANARMPQK LWV R RVLR+LL KYR AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IH+KKAEK+R K+LSDQAEARR KVKEA+KRREERI  K
Sbjct: 121 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREERIAAK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           ++ELL ++AREDE A   K
Sbjct: 181 KEELLQTFAREDEAAVTAK 199

Source: Antheraea yamamai

Species: Antheraea yamamai

Genus: Antheraea

Family: Saturniidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|268306430|gb|ACY95336.1| ribosomal protein L19 [Manduca sexta]

 Score =  339 bits (870), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/199 (83%), Positives = 181/199 (90%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRK+IKDGL+IKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKR+GTANARMPQK LWV R RVLR+LL KYR AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IH+KKAEK+R K+LSDQAEARR KVKEA+KRREERI  K
Sbjct: 121 HALYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREERIAAK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           ++ELL ++AREDE A   K
Sbjct: 181 KEELLQTFAREDEAAVTAK 199

Source: Manduca sexta

Species: Manduca sexta

Genus: Manduca

Family: Sphingidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|112984306|ref|NP_001037221.1| ribosomal protein L19 [Bombyx mori] gi|54609231|gb|AAV34831.1| ribosomal protein L19 [Bombyx mori] gi|95103154|gb|ABF51518.1| PDP protein [Bombyx mori]

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 166/195 (85%), Positives = 180/195 (92%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRK+IKDGL+IKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKR+GTANARMPQK LWV R RVLR+LL KYR AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IH+KKAEK+R K+LSDQAEARR KVKEA+KRREERI  K
Sbjct: 121 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARKRREERIAAK 180

Query: 181 RQELLASYAREDEKA 195
           ++ELL ++AREDE A
Sbjct: 181 KEELLQTFAREDEAA 195

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|342356421|gb|AEL28869.1| ribosomal protein L19 [Heliconius melpomene cythera]

 Score =  338 bits (867), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 166/199 (83%), Positives = 181/199 (90%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRK+IKDGL+IKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKR+GTANARMPQK LWV R RVLR+LL KYR AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IH+KKAEK+R K+LSDQAEARR +VKEA+KRREERI  K
Sbjct: 121 HALYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNRVKEARKRREERIAAK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           ++ELL ++AREDE A   K
Sbjct: 181 KEELLQTFAREDEAAVTAK 199

Source: Heliconius melpomene cythera

Species: Heliconius melpomene

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|315115433|gb|ADT80689.1| ribosomal protein L19 [Euphydryas aurinia]

 Score =  337 bits (864), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/199 (83%), Positives = 181/199 (90%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIA TNSRQNIRK+IKDGL+IKKPVAVHSR
Sbjct: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN EARRKGRHCGFGKR+GTANARMPQK LWV R RVLR+LL KYR AKKID+HLY
Sbjct: 61  ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQRVLRKLLLKYRTAKKIDRHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LYMKAKGNVFKNKRVLME+IH+KKAEK+R K+LSDQAEARR +VKEA+KRREERI  K
Sbjct: 121 HALYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNRVKEARKRREERIAAK 180

Query: 181 RQELLASYAREDEKAAQKK 199
           ++ELL ++AREDE A   K
Sbjct: 181 KEELLQNFAREDEAAVTAK 199

Source: Euphydryas aurinia

Species: Euphydryas aurinia

Genus: Euphydryas

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
FB|FBgn0002607	203	RpL19 "Ribosomal protein L19"	0.989	0.970	0.756	1.3e-75
ZFIN|ZDB-GENE-040426-2290	196	rpl19 "ribosomal protein L19"	0.969	0.984	0.663	8.2e-67
UNIPROTKB|Q3T0W9	196	RPL19 "60S ribosomal protein L	0.969	0.984	0.652	1.7e-66
UNIPROTKB|D0VWQ5	196	RPL19 "60S ribosomal protein L	0.969	0.984	0.652	1.7e-66
UNIPROTKB|P84098	196	RPL19 "60S ribosomal protein L	0.969	0.984	0.652	1.7e-66
MGI|MGI:98020	196	Rpl19 "ribosomal protein L19"	0.969	0.984	0.652	1.7e-66
RGD|621183	196	Rpl19 "ribosomal protein L19"	0.969	0.984	0.652	1.7e-66
UNIPROTKB|F2Z546	196	RPL19 "Ribosomal protein L19"	0.964	0.979	0.651	5.8e-66
UNIPROTKB|Q5ZKK8	196	RPL19 "Ribosomal protein L19"	0.969	0.984	0.647	1.2e-65
UNIPROTKB|J3KTE4	194	RPL19 "Ribosomal protein L19"	0.954	0.979	0.652	1.2e-65

FB|FBgn0002607 RpL19 "Ribosomal protein L19" [Drosophila melanogaster (taxid:7227)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 149/197 (75%), Positives = 163/197 (82%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIA TNSRQNIRKLIKDGLIIKKPV VHSR
Sbjct:     1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
              R RKN EARRKGRHCGFGKRKGTANARMP K+LW+ R RVLRRLLKKYR +KKID+HLY
Sbjct:    61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LYMK KGNVFKNKRVLME+IHKKKAEK R+K+L+DQ                  I  K
Sbjct:   121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180

Query:   181 RQELLASYAREDEKAAQ 197
             +QEL+A +A+EDE AA+
Sbjct:   181 KQELIALHAKEDEIAAK 197

GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS

GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA;NAS

GO:0006412 "translation" evidence=ISS

GO:0005840 "ribosome" evidence=IDA;NAS

GO:0000022 "mitotic spindle elongation" evidence=IMP

GO:0051298 "centrosome duplication" evidence=IMP

ZFIN|ZDB-GENE-040426-2290 rpl19 "ribosomal protein L19" [Danio rerio (taxid:7955)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 128/193 (66%), Positives = 154/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKL+KDGLIIKKPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR+AKKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY++AKGNVFKNKR+LME IHK KA+K+R KLL+DQ                   Q K
Sbjct:   121 HSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTKTREARKRREERQQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++EDE
Sbjct:   181 KEEIIKTLSKEDE 193

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

UNIPROTKB|Q3T0W9 RPL19 "60S ribosomal protein L19" [Bos taurus (taxid:9913)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 126/193 (65%), Positives = 154/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct:   121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++E+E
Sbjct:   181 KEEIIKTLSKEEE 193

GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

UNIPROTKB|D0VWQ5 RPL19 "60S ribosomal protein L19" [Canis lupus familiaris (taxid:9615)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 126/193 (65%), Positives = 154/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct:   121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++E+E
Sbjct:   181 KEEIIKTLSKEEE 193

GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

UNIPROTKB|P84098 RPL19 "60S ribosomal protein L19" [Homo sapiens (taxid:9606)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 126/193 (65%), Positives = 154/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct:   121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++E+E
Sbjct:   181 KEEIIKTLSKEEE 193

GO:0003723 "RNA binding" evidence=TAS

GO:0003735 "structural constituent of ribosome" evidence=NAS;TAS

GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA;TAS

GO:0006412 "translation" evidence=NAS;TAS

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006413 "translational initiation" evidence=TAS

GO:0006414 "translational elongation" evidence=TAS

GO:0006415 "translational termination" evidence=TAS

GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0019058 "viral infectious cycle" evidence=TAS

GO:0019083 "viral transcription" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

MGI|MGI:98020 Rpl19 "ribosomal protein L19" [Mus musculus (taxid:10090)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 126/193 (65%), Positives = 154/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct:   121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++E+E
Sbjct:   181 KEEIIKTLSKEEE 193

GO:0003735 "structural constituent of ribosome" evidence=IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IC

GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO;IDA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

RGD|621183 Rpl19 "ribosomal protein L19" [Rattus norvegicus (taxid:10116)]

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 126/193 (65%), Positives = 154/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct:   121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++E+E
Sbjct:   181 KEEIIKTLSKEEE 193

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISO

GO:0006412 "translation" evidence=IEA

GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA;ISO

UNIPROTKB|F2Z546 RPL19 "Ribosomal protein L19" [Sus scrofa (taxid:9823)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 125/192 (65%), Positives = 153/192 (79%)

Query:     2 SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
             S L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSRA
Sbjct:     2 SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRA 61

Query:    62 RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
             R RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+YH
Sbjct:    62 RCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYH 121

Query:   122 QLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMKR 181
              LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K+
Sbjct:   122 SLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181

Query:   182 QELLASYAREDE 193
             +E++ + ++E+E
Sbjct:   182 EEIIKTLSKEEE 193

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

UNIPROTKB|Q5ZKK8 RPL19 "Ribosomal protein L19" [Gallus gallus (taxid:9031)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 125/193 (64%), Positives = 153/193 (79%)

Query:     1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
             MS L+LQKRLA+SV+ CGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct:     1 MSMLRLQKRLASSVLCCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query:    61 ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
             AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct:    61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query:   121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
             H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct:   121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query:   181 RQELLASYAREDE 193
             ++E++ + ++E+E
Sbjct:   181 KEEIIKTLSKEEE 193

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA

UNIPROTKB|J3KTE4 RPL19 "Ribosomal protein L19" [Homo sapiens (taxid:9606)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 124/190 (65%), Positives = 152/190 (80%)

Query:     4 LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRART 63
             L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSRAR 
Sbjct:     2 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 61

Query:    64 RKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQL 123
             RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+YH L
Sbjct:    62 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 121

Query:   124 YMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMKRQE 183
             Y+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K++E
Sbjct:   122 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEE 181

Query:   184 LLASYAREDE 193
             ++ + ++E+E
Sbjct:   182 IIKTLSKEEE 191

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8HXN9	RL19_MACFA	No assigned EC number	0.7305	0.9698	0.9846	N/A	N/A
P05734	RL19A_SCHPO	No assigned EC number	0.5854	0.9698	1.0	yes	N/A
P0CX83	RL19B_YEAST	No assigned EC number	0.5837	0.9296	0.9788	yes	N/A
P0CX82	RL19A_YEAST	No assigned EC number	0.5837	0.9296	0.9788	yes	N/A
O02639	RL19_CAEEL	No assigned EC number	0.6810	0.9296	0.9343	yes	N/A
P14119	RL19E_HALMA	No assigned EC number	0.3661	0.7135	0.9530	yes	N/A
O26129	RL19E_METTH	No assigned EC number	0.3884	0.6984	0.9391	yes	N/A
P0DJ60	RL19_TETTS	No assigned EC number	0.6033	0.8994	0.9675	N/A	N/A
Q9SRX2	RL191_ARATH	No assigned EC number	0.6961	0.8894	0.8271	no	N/A
O59437	RL19E_PYRHO	No assigned EC number	0.4788	0.7135	0.9466	yes	N/A
Q6P5L3	RL19_DANRE	No assigned EC number	0.7357	0.9698	0.9846	yes	N/A
Q9HPB6	RL19E_HALSA	No assigned EC number	0.3445	0.7437	0.9932	yes	N/A
P14329	RL19_DICDI	No assigned EC number	0.6473	0.8693	0.9301	yes	N/A
Q7ZYS1	RL19_XENLA	No assigned EC number	0.7230	0.9798	0.9898	N/A	N/A
P49693	RL193_ARATH	No assigned EC number	0.6795	0.8894	0.8509	no	N/A
D0VWQ5	RL19_CANFA	No assigned EC number	0.7305	0.9698	0.9846	yes	N/A
O05639	RL19E_SULAC	No assigned EC number	0.3851	0.6733	0.8933	yes	N/A
Q3IMX0	RL19E_NATPD	No assigned EC number	0.3892	0.7487	1.0	yes	N/A
P36241	RL19_DROME	No assigned EC number	0.8375	0.9899	0.9704	yes	N/A
Q9YF93	RL19E_AERPE	No assigned EC number	0.3428	0.6130	0.7870	yes	N/A
Q5RB99	RL19_PONAB	No assigned EC number	0.7305	0.9698	0.9846	yes	N/A
Q9UX89	RL19E_SULSO	No assigned EC number	0.3777	0.6733	0.8874	yes	N/A
P84099	RL19_MOUSE	No assigned EC number	0.7305	0.9698	0.9846	yes	N/A
P84098	RL19_HUMAN	No assigned EC number	0.7305	0.9698	0.9846	yes	N/A
P14024	RL19E_METVA	No assigned EC number	0.3984	0.6683	0.8926	yes	N/A
Q9LUQ6	RL192_ARATH	No assigned EC number	0.6795	0.8894	0.8468	yes	N/A
O28372	RL19E_ARCFU	No assigned EC number	0.4696	0.6633	0.8859	yes	N/A
P54043	RL19E_METJA	No assigned EC number	0.4071	0.7035	0.9271	yes	N/A
Q3T0W9	RL19_BOVIN	No assigned EC number	0.7305	0.9698	0.9846	yes	N/A
Q8U016	RL19E_PYRFU	No assigned EC number	0.4507	0.7135	0.9466	yes	N/A
Q9V1V3	RL19E_PYRAB	No assigned EC number	0.4577	0.7135	0.9403	yes	N/A
O42699	RL19B_SCHPO	No assigned EC number	0.5803	0.9698	1.0	yes	N/A
Q90YU8	RL19_ICTPU	No assigned EC number	0.7253	0.9698	0.9846	N/A	N/A
P84100	RL19_RAT	No assigned EC number	0.7305	0.9698	0.9846	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	199
cd01417	164	cd01417, Ribosomal_L19e_E, Ribosomal protein L19e,	3e-77
PTZ00097	175	PTZ00097, PTZ00097, 60S ribosomal protein L19; Pro	2e-71
pfam01280	148	pfam01280, Ribosomal_L19e, Ribosomal protein L19e	2e-64
cd00481	145	cd00481, Ribosomal_L19e, Ribosomal protein L19e	8e-64
PTZ00436	357	PTZ00436, PTZ00436, 60S ribosomal protein L19-like	2e-46
COG2147	150	COG2147, RPL19A, Ribosomal protein L19E [Translati	4e-46
PRK08570	150	PRK08570, rpl19e, 50S ribosomal protein L19e; Revi	6e-39
cd01418	145	cd01418, Ribosomal_L19e_A, Ribosomal protein L19e,	1e-31

>gnl|CDD|238705 cd01417, Ribosomal_L19e_E, Ribosomal protein L19e, eukaryotic

 Score =  228 bits (583), Expect = 3e-77
 Identities = 130/164 (79%), Positives = 148/164 (90%)

Query: 4   LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRART 63
           L+LQKRLAASV++CGK+KVWLDPNEI+EI+  NSRQ+IRKLIKDGLIIKKPV VHSR+R 
Sbjct: 1   LRLQKRLAASVLKCGKRKVWLDPNEISEISNANSRQSIRKLIKDGLIIKKPVKVHSRSRA 60

Query: 64  RKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQL 123
           RK  EA+RKGRH G+GKRKGTANARMP K+LW+ R RVLRRLLKKYR++KKIDKHLYH+L
Sbjct: 61  RKRHEAKRKGRHMGYGKRKGTANARMPSKVLWMRRQRVLRRLLKKYRESKKIDKHLYHEL 120

Query: 124 YMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVK 167
           Y+KAKGNVFKNKRVLME IHK KAEK+R K L+DQAEARR K K
Sbjct: 121 YLKAKGNVFKNKRVLMEHIHKAKAEKAREKELADQAEARRAKNK 164

L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits. Length = 164

>gnl|CDD|185443 PTZ00097, PTZ00097, 60S ribosomal protein L19; Provisional

 Score =  214 bits (546), Expect = 2e-71
 Identities = 115/174 (66%), Positives = 143/174 (82%)

Query: 3   SLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRAR 62
           +L+LQKRLAASV++CGK +VWLDPNE +EI++ NSR +IRKLIKDGLII+KPVAVHSRAR
Sbjct: 1   NLRLQKRLAASVLKCGKNRVWLDPNEASEISLANSRFSIRKLIKDGLIIRKPVAVHSRAR 60

Query: 63  TRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQ 122
            R+  EA+RKGRH G GKR+GT  ARMP K+LW+ R RVLRRLL+KYR AKKID+H+YH+
Sbjct: 61  ARRFHEAKRKGRHTGIGKRRGTREARMPTKVLWMRRQRVLRRLLRKYRAAKKIDRHMYHE 120

Query: 123 LYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREER 176
            Y+K+KGN FKNKRVL+E IHK K EK + K + DQ EARR K K  + +R+ +
Sbjct: 121 FYLKSKGNQFKNKRVLIEAIHKTKNEKVKEKKIQDQLEARRAKAKALRNKRKAK 174

Length = 175

>gnl|CDD|201707 pfam01280, Ribosomal_L19e, Ribosomal protein L19e

 Score =  195 bits (497), Expect = 2e-64
 Identities = 99/148 (66%), Positives = 113/148 (76%)

Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
             LKLQKRLAA V+ CGK +VW+DPNE+ EIA   +R++IRKLIKDGLIIKKP   HSR 
Sbjct: 1   MDLKLQKRLAADVLGCGKNRVWIDPNELEEIADAITREDIRKLIKDGLIIKKPKKGHSRG 60

Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           R RK KE RRKGRH G G RKGT  ARMP+K LW+ R+R LRRLL++ R A KIDKH Y 
Sbjct: 61  RARKRKEKRRKGRHRGPGSRKGTKGARMPKKELWIRRIRALRRLLRELRDAGKIDKHTYR 120

Query: 122 QLYMKAKGNVFKNKRVLMEFIHKKKAEK 149
           +LY KAKG VFKNK  L E+IHK KAEK
Sbjct: 121 ELYRKAKGGVFKNKAHLKEYIHKAKAEK 148

Length = 148

>gnl|CDD|238268 cd00481, Ribosomal_L19e, Ribosomal protein L19e

 Score =  193 bits (493), Expect = 8e-64
 Identities = 100/145 (68%), Positives = 116/145 (80%)

Query: 4   LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRART 63
           L+LQKRLAA +++CGK +VW+DPNE+ EIA  N+R++IRKLIKDGLIIKKP   HSR R 
Sbjct: 1   LRLQKRLAADILKCGKNRVWIDPNELEEIANANTREDIRKLIKDGLIIKKPKKGHSRGRA 60

Query: 64  RKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQL 123
           RK  EARRKGRH G G RKGT  ARMP K LW+ R+R LRRLLKK R + KIDKH Y +L
Sbjct: 61  RKRHEARRKGRHRGPGSRKGTKGARMPSKELWIRRIRALRRLLKKLRDSGKIDKHTYREL 120

Query: 124 YMKAKGNVFKNKRVLMEFIHKKKAE 148
           Y+KAKGNVFKNKR L E+IHK KAE
Sbjct: 121 YLKAKGNVFKNKRHLKEYIHKAKAE 145

L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits. Length = 145

>gnl|CDD|185616 PTZ00436, PTZ00436, 60S ribosomal protein L19-like protein; Provisional

 Score =  156 bits (394), Expect = 2e-46
 Identities = 111/196 (56%), Positives = 148/196 (75%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SLKLQ RLAA ++RCG+ +VWLDPNE +EI+  NSR+++RKLIKDGLII+KPV VHSR
Sbjct: 1   MVSLKLQARLAADILRCGRHRVWLDPNEASEISNANSRKSVRKLIKDGLIIRKPVKVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R  KEA+  GRH G G+R+GT  ARMP K LW+ R+R+LRRLL+KYR+ KKID+H+Y
Sbjct: 61  SRWRHMKEAKSMGRHEGAGRREGTREARMPSKELWMRRLRILRRLLRKYREEKKIDRHIY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
            +LY+KAKGNVF+NKR LME IHK K EK + + L++Q  A+R K ++ + +  ++   K
Sbjct: 121 RELYVKAKGNVFRNKRNLMEHIHKVKNEKKKERQLAEQLAAKRLKDEQHRHKARKQELRK 180

Query: 181 RQELLASYAREDEKAA 196
           R++      RED  AA
Sbjct: 181 REKDRERARREDAAAA 196

Length = 357

>gnl|CDD|225058 COG2147, RPL19A, Ribosomal protein L19E [Translation, ribosomal structure and biogenesis]

 Score =  148 bits (377), Expect = 4e-46
 Identities = 77/149 (51%), Positives = 97/149 (65%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS+L+ QKRLAA ++  G+ +VW+DPNEI EIA   +R++IR LIKDG+I  KP    SR
Sbjct: 1   MSNLRTQKRLAADILGVGENRVWIDPNEIEEIASAITREDIRALIKDGVIKAKPKKGISR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
            R RK    ++KGR  G G RKGT  ARMP K  W+ R+R LRR L+K R   KIDKH Y
Sbjct: 61  GRARKRHAQKKKGRRRGPGSRKGTKGARMPSKERWIKRIRALRRELRKLRDDGKIDKHTY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEK 149
            +LY  AKG  FK+K  L  +I + K  K
Sbjct: 121 RKLYRMAKGGAFKSKSHLKSYIEEAKLLK 149

Length = 150

>gnl|CDD|236295 PRK08570, rpl19e, 50S ribosomal protein L19e; Reviewed

 Score =  130 bits (329), Expect = 6e-39
 Identities = 65/149 (43%), Positives = 91/149 (61%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M  L  QKRLAA ++  G  +VW+DP  + ++A   +R++IR+LIK+G+I  KP    SR
Sbjct: 1   MMDLSAQKRLAADILGVGVSRVWIDPEALEDVAEAITREDIRELIKEGVIKAKPKKGISR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
            R R+  E R+KGR  G G RKG   AR P+K  W+NR+R LRR L++ R   KID+  Y
Sbjct: 61  GRARERHEKRKKGRRRGPGSRKGKKGARTPKKERWINRIRALRRYLRELRDEGKIDRKTY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEK 149
            +LY KAKG  F++   L  +I +    K
Sbjct: 121 RKLYRKAKGGEFRSVSHLKTYIEEHGLLK 149

Length = 150

>gnl|CDD|238706 cd01418, Ribosomal_L19e_A, Ribosomal protein L19e, archaeal

 Score =  112 bits (281), Expect = 1e-31
 Identities = 61/139 (43%), Positives = 84/139 (60%)

Query: 4   LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRART 63
           L  Q+RLAA ++  G  +VW+DP  + E+A   +R +IR LIK+G+I  KP    SR R 
Sbjct: 1   LSSQRRLAADILGVGINRVWIDPERLEEVAEAITRDDIRALIKEGVIKAKPKKGISRGRL 60

Query: 64  RKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQL 123
           ++  E R+KGR  G G RKG   AR P+K  W+  +R LRR LK+ R   KIDK  Y +L
Sbjct: 61  KERHEKRKKGRRRGPGSRKGKKGARTPKKERWIKTIRALRRYLKELRDKGKIDKKTYRKL 120

Query: 124 YMKAKGNVFKNKRVLMEFI 142
           Y KAKG  F++   L  ++
Sbjct: 121 YRKAKGGSFRSLSHLKSYL 139

L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits. Length = 145

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	199
KOG1696|consensus	193		100.0
PTZ00097	175	60S ribosomal protein L19; Provisional	100.0
cd01417	164	Ribosomal_L19e_E Ribosomal protein L19e, eukaryoti	100.0
PTZ00436	357	60S ribosomal protein L19-like protein; Provisiona	100.0
PF01280	148	Ribosomal_L19e: Ribosomal protein L19e; InterPro:	100.0
cd00481	145	Ribosomal_L19e Ribosomal protein L19e. L19e is fou	100.0
PRK08570	150	rpl19e 50S ribosomal protein L19e; Reviewed	100.0
cd01418	145	Ribosomal_L19e_A Ribosomal protein L19e, archaeal.	100.0
COG2147	150	RPL19A Ribosomal protein L19E [Translation, riboso	100.0

>KOG1696|consensus

Probab=100.00  E-value=5.5e-90  Score=575.52  Aligned_cols=193  Identities=76%  Similarity=1.149  Sum_probs=191.9

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++|+|||||||+||+.+|||||||+++|++|||||+|++||+||+||.+|+++|||+||+++.+++++|||+|+|+
T Consensus         1 Ms~lrlqKRLAssVl~cGKkKvWlDpNE~~eI~~ansRq~irkLikdg~iI~Kp~~vhsr~r~rk~~~akrkgrH~G~GK   80 (193)
T KOG1696|consen    1 MSNLRLQKRLAASVLKCGKKKVWLDPNEISEISGANSRQNIRKLIKDGLIIRKPVTVHSRSRCRKRLEAKRKGRHMGYGK   80 (193)
T ss_pred             CchHHHHHHHHHHHHHhcccceeeCccHHHHhcccchHHHHHHHHhCCeEeecchhhhHHHHHHHHHHHHHhccccCccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAE  160 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQae  160 (199)
                      |+||+|||||+|++||+||||||++|++|||+|+||+|+||+||++||||+|+|+++||||||++|||++++|+|+||||
T Consensus        81 RkGTanArmP~k~~Wmrr~RvlRrlL~kyR~skKIdkh~YH~lY~k~KGnvFKnK~~LmE~I~K~KAe~~r~K~LadQae  160 (193)
T KOG1696|consen   81 RKGTANARMPSKVLWMRRMRVLRRLLKKYRDSKKIDKHMYHDLYLKVKGNVFKNKRVLMEHIHKSKAEKAREKLLADQAE  160 (193)
T ss_pred             ccccccccCchhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHhhhhhHhh
Q psy17505        161 ARRQKVKEAKKRREERIQMKRQELLASYAREDE  193 (199)
Q Consensus       161 Arr~k~k~~r~rr~~r~~~kk~~~~~~~~~~~e  193 (199)
                      |+|.++++++++++|++++++++++.+++++||
T Consensus       161 Arr~k~k~ar~rreer~~~k~~~~~~~~~k~ee  193 (193)
T KOG1696|consen  161 ARRLKNKAARKRREERLAAKPQELIKTLSKEEE  193 (193)
T ss_pred             HHHhhhHHHhhhHHHHHhhchhhhhcccccccC
Confidence            999999999999999999999999999999986

>PTZ00097 60S ribosomal protein L19; Provisional

Probab=100.00  E-value=3.1e-80  Score=516.23  Aligned_cols=174  Identities=66%  Similarity=1.082  Sum_probs=171.2

Q ss_pred             chhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCcc
Q psy17505          3 SLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRK   82 (199)
Q Consensus         3 ~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkRk   82 (199)
                      +|++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++||||||++++++++++|||+|||+|+
T Consensus         1 ~l~~QKRLAA~vL~cG~~rVWiDP~~~~eI~~A~tR~dIR~LIkdG~I~~kp~kg~SR~R~r~~~~~k~kGR~~G~G~RK   80 (175)
T PTZ00097          1 NLRLQKRLAASVLKCGKNRVWLDPNEASEISLANSRFSIRKLIKDGLIIRKPVAVHSRARARRFHEAKRKGRHTGIGKRR   80 (175)
T ss_pred             CchHHHHHHHHHHCCCCCceeeCHHHHHHHHHhhhHHHHHHHHHCCCeeecCCCCCChHHHHHHHHHHHhCCCCCCCCCc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHHHH
Q psy17505         83 GTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEAR  162 (199)
Q Consensus        83 Gt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQaeAr  162 (199)
                      ||+|||||+|+.||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|++|||+.|+|+++++.|+||+||+
T Consensus        81 Gtk~AR~p~K~~W~~riR~lRr~Lk~~R~~~kIdk~~Yr~lY~kaKGn~Fknk~~L~~~I~~~kae~~r~k~l~~q~~a~  160 (175)
T PTZ00097         81 GTREARMPTKVLWMRRQRVLRRLLRKYRAAKKIDRHMYHEFYLKSKGNQFKNKRVLIEAIHKTKNEKVKEKKIQDQLEAR  160 (175)
T ss_pred             CcccccCcHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHH
Q psy17505        163 RQKVKEAKKRREER  176 (199)
Q Consensus       163 r~k~k~~r~rr~~r  176 (199)
                      +.++++++++++++
T Consensus       161 r~k~~~~~~~r~~~  174 (175)
T PTZ00097        161 RAKAKALRNKRKAK  174 (175)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999987653

>cd01417 Ribosomal_L19e_E Ribosomal protein L19e, eukaryotic

Probab=100.00  E-value=5.4e-79  Score=504.72  Aligned_cols=164  Identities=79%  Similarity=1.202  Sum_probs=161.9

Q ss_pred             hhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCccc
Q psy17505          4 LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRKG   83 (199)
Q Consensus         4 l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkRkG   83 (199)
                      |++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++||||||++++++++++|||+|+|+|+|
T Consensus         1 l~~QKRLAA~vL~cG~~rVW~DP~~~~eI~~A~tR~dIR~LIkdG~I~~kp~kg~SR~R~r~~~~~k~kGR~~G~G~RkG   80 (164)
T cd01417           1 LRLQKRLAASVLKCGKRKVWLDPNEISEISNANSRQSIRKLIKDGLIIKKPVKVHSRSRARKRHEAKRKGRHMGYGKRKG   80 (164)
T ss_pred             CcHHHHHHHHHHCCCCCceeeCHHHHHHHHHhhhHHHHHHHHHCCCeeecCCCcCCHHHHHHHHHHHHhCCCCCCCCCcC
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHHHHH
Q psy17505         84 TANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARR  163 (199)
Q Consensus        84 t~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQaeArr  163 (199)
                      |+|||||+|+.||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|++|||+.|+|+++++.|+||+||++
T Consensus        81 t~~AR~p~K~~W~~riR~lRr~Lk~~R~~~kIdk~~Yr~lY~kaKGn~Fknk~~L~~~I~~~kae~~r~k~l~~q~~a~r  160 (164)
T cd01417          81 TANARMPSKVLWMRRQRVLRRLLKKYRESKKIDKHLYHELYLKAKGNVFKNKRVLMEHIHKAKAEKAREKELADQAEARR  160 (164)
T ss_pred             cccccCcHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhH
Q psy17505        164 QKVK  167 (199)
Q Consensus       164 ~k~k  167 (199)
                      ++++
T Consensus       161 ~~~~  164 (164)
T cd01417         161 AKNK  164 (164)
T ss_pred             hccC
Confidence            8863

L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits.

>PTZ00436 60S ribosomal protein L19-like protein; Provisional

Probab=100.00  E-value=5.1e-77  Score=532.08  Aligned_cols=170  Identities=61%  Similarity=1.007  Sum_probs=168.0

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++|+||||+||+||++|||||||+++||++||||+|||+||+||+|+++|++||||+|+|++++++++|||+|+||
T Consensus         1 M~dLklQKRLAAsVL~cGk~RVWiDPnel~eIa~AiTReDIRkLIkdGlIikKp~KGhSRgRaRkr~eaKrKGRhrG~Gs   80 (357)
T PTZ00436          1 MVSLKLQARLAADILRCGRHRVWLDPNEASEISNANSRKSVRKLIKDGLIIRKPVKVHSRSRWRHMKEAKSMGRHEGAGR   80 (357)
T ss_pred             CcchHHHHHHHHHHhCCCCCceeeCHHHHHHHHHhhhHHHHHHHHHCCCeeecCcccCChHHHHHHHHHHHhCcCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAE  160 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQae  160 (199)
                      |+||+|||||+|++||+|||+||++|++|||+|+||+|+||.||+++|||+|+|++||++|||+.|+|+.+++.|.||+|
T Consensus        81 RKGTk~AR~P~K~~WIrRIRaLRRlLKklRd~gKIDkh~YR~LYrKAKGn~FKNK~~L~e~I~k~KaE~~R~K~L~dQ~e  160 (357)
T PTZ00436         81 REGTREARMPSKELWMRRLRILRRLLRKYREEKKIDRHIYRELYVKAKGNVFRNKRNLMEHIHKVKNEKKKERQLAEQLA  160 (357)
T ss_pred             CcCcccccCcHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHH
Q psy17505        161 ARRQKVKEAK  170 (199)
Q Consensus       161 Arr~k~k~~r  170 (199)
                      |+|.++++.|
T Consensus       161 ArR~k~~~~r  170 (357)
T PTZ00436        161 AKRLKDEQHR  170 (357)
T ss_pred             HHHHHhhhhh
Confidence            9999988654

>PF01280 Ribosomal_L19e: Ribosomal protein L19e; InterPro: IPR000196 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=100.00  E-value=1.1e-74  Score=472.82  Aligned_cols=148  Identities=72%  Similarity=1.088  Sum_probs=131.0

Q ss_pred             CchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCc
Q psy17505          2 SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKR   81 (199)
Q Consensus         2 ~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkR   81 (199)
                      |+|++|+||||+||+||+++|||||||++||++||||+|||+||+||+|+++|++|||||||+++++++++|||+|||+|
T Consensus         1 m~l~~QKRLAa~vL~~G~~rVw~DP~~~~eI~~A~tR~~IR~LIk~G~I~~k~~k~~Sr~R~r~~~~~r~kGr~~G~G~R   80 (148)
T PF01280_consen    1 MDLKLQKRLAASVLGCGKNRVWIDPNELEEIANAITREDIRKLIKDGLIIKKPVKGHSRGRARKRKEARRKGRHRGPGKR   80 (148)
T ss_dssp             -STHHHHHHHHHHHTS-GGGEEE-STTHHHHHH--SHHHHHHHHHTTSEEE---S--STHHHHHHHHHHHCTTS-SSTTS
T ss_pred             CccHHHHHHHHHHHCCCCCcEEeCHHHHHHHHhhhhHHHHHHHHHCCCeEeCCCCCCchHHHHHHHHHHhhccccccccc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHH
Q psy17505         82 KGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEK  149 (199)
Q Consensus        82 kGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~  149 (199)
                      +||+|||||+|++||++||+||++|++|||+|+||+|+||+||++||||+|+|+++|+||||+.++|+
T Consensus        81 kGt~~AR~~~K~~W~~riR~lRr~Lk~~r~~~kID~~~Yr~lY~kaKGn~Fkn~~~L~~~i~~~k~e~  148 (148)
T PF01280_consen   81 KGTKNARMPEKELWMRRIRALRRLLKRLRDSGKIDRHMYRSLYRKAKGNVFKNKRHLMEHIHKLKAEK  148 (148)
T ss_dssp             -S-HHHHS-HHHHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHTTS-SSHHHHHHHHHHHHHCH
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCcccCHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999985

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents structural domain of the ribosomal protein L19 from eukaryotes, as well as L19e from archaea []. L19/L19e is absent in bacteria. L19/L19e is part of the large ribosomal subunit, whose structure has been determined in a number of eukaryotic and archaeal species []. L19/L19e is a multi-helical protein consisting of two different 3-helical domains connected by a long, partly helical linker.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 3IZR_T 3O58_S 3O5H_S 3IZS_T 2WWA_J 1S1I_P 2WW9_J 2ZKR_7 4A1A_O 4A1C_O ....

>cd00481 Ribosomal_L19e Ribosomal protein L19e

Probab=100.00  E-value=3.7e-73  Score=462.38  Aligned_cols=145  Identities=69%  Similarity=1.100  Sum_probs=143.0

Q ss_pred             hhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCccc
Q psy17505          4 LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRKG   83 (199)
Q Consensus         4 l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkRkG   83 (199)
                      |++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++||||+|++++++++++|||+|||+|+|
T Consensus         1 l~~QkRLAA~vL~~G~~rVW~DP~~~~eI~~A~tR~dIR~LIkdG~I~~kp~kg~Sr~R~r~~~~~r~kGr~~G~G~RkG   80 (145)
T cd00481           1 LRLQKRLAADILKCGKNRVWIDPNELEEIANANTREDIRKLIKDGLIIKKPKKGHSRGRARKRHEARRKGRHRGPGSRKG   80 (145)
T ss_pred             CcHHHHHHHHHHCCCCCceeeCHHHHHHHHHhhhHHHHHHHHHCCCeeecCCCCCChHHHHHHHHHHHhCcCCCCCCccC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhH
Q psy17505         84 TANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAE  148 (199)
Q Consensus        84 t~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae  148 (199)
                      |++||||+|+.||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|++|||+.++|
T Consensus        81 t~~AR~p~K~~W~~riR~lRr~Lk~~R~~~kIdk~~Yr~lY~kaKG~~Fknk~~L~~~i~~~~~~  145 (145)
T cd00481          81 TKGARMPSKELWIRRIRALRRLLKKLRDSGKIDKHTYRELYLKAKGNVFKNKRHLKEYIHKAKAE  145 (145)
T ss_pred             ccccCCcHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCCHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999998764

L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits.

>PRK08570 rpl19e 50S ribosomal protein L19e; Reviewed

Probab=100.00  E-value=1.3e-72  Score=461.31  Aligned_cols=146  Identities=44%  Similarity=0.761  Sum_probs=144.3

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++||||||++++++++++|||+|+||
T Consensus         1 M~~l~~qkRLAA~iL~~G~~rVw~DP~~~~eI~~A~tR~dIR~LI~~G~I~~kp~kg~Sr~R~r~~~~~r~kGr~~G~G~   80 (150)
T PRK08570          1 MMDLSAQKRLAADILGVGVSRVWIDPEALEDVAEAITREDIRELIKEGVIKAKPKKGISRGRARERHEKRKKGRRRGPGS   80 (150)
T ss_pred             CcchHHHHHHHHHHHCCCccceeeCHHHHHHHHHHhhHHHHHHHHHCCCeeecCccCCChHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHh
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKK  146 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~K  146 (199)
                      |+||+|||+|+|+.||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|++||+...
T Consensus        81 RkGt~~AR~p~K~~W~~riR~lRr~Lk~lR~~~kId~~~Yr~lY~kaKGn~Fkn~~~L~~~i~~~~  146 (150)
T PRK08570         81 RKGKKGARTPKKERWINRIRALRRYLRELRDEGKIDRKTYRKLYRKAKGGEFRSVSHLKTYIEEHG  146 (150)
T ss_pred             CCCcccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCccCCHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999999999999754

>cd01418 Ribosomal_L19e_A Ribosomal protein L19e, archaeal

Probab=100.00  E-value=4.6e-71  Score=450.04  Aligned_cols=142  Identities=43%  Similarity=0.746  Sum_probs=140.0

Q ss_pred             hhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCccc
Q psy17505          4 LKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKRKG   83 (199)
Q Consensus         4 l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkRkG   83 (199)
                      |++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++||||+|++++++++++|||+|+|||+|
T Consensus         1 l~~QkRLAA~iL~~G~~rVw~DP~~~~eI~~A~tR~dIR~LI~~G~I~~kp~kg~Sr~R~r~~~~~r~kGr~~G~G~RkG   80 (145)
T cd01418           1 LSSQRRLAADILGVGINRVWIDPERLEEVAEAITRDDIRALIKEGVIKAKPKKGISRGRLKERHEKRKKGRRRGPGSRKG   80 (145)
T ss_pred             CcHHHHHHHHHHCCCCCeeeeChHHHHHHHHhhhHHHHHHHHHCCCeeecCCCCCCHHHHHHHHHHHHhCcCCCCCCCCC
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHH
Q psy17505         84 TANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKK  145 (199)
Q Consensus        84 t~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~  145 (199)
                      |+|||||+|+.||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|++||...
T Consensus        81 t~~AR~p~K~~W~~riR~lRr~Lk~~R~~~kId~~~Yr~lY~kaKGn~Fkn~~~L~~~I~~~  142 (145)
T cd01418          81 KKGARTPKKERWIKTIRALRRYLKELRDKGKIDKKTYRKLYRKAKGGSFRSLSHLKSYLKQH  142 (145)
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999754

L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits.

>COG2147 RPL19A Ribosomal protein L19E [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=3.6e-67  Score=427.94  Aligned_cols=149  Identities=52%  Similarity=0.815  Sum_probs=146.3

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |+||+.|+||||+|||||+++||||||+++||++|+||+|||.||+||+|+.+|++|+|++|++++++++++|||+||||
T Consensus         1 M~nl~~qkRLAA~il~vG~~Rvwidp~~~eei~~A~TR~dIr~LIk~g~I~~k~~kg~SrgR~rkr~~qkkkgr~rG~Gs   80 (150)
T COG2147           1 MSNLRTQKRLAADILGVGENRVWIDPNEIEEIASAITREDIRALIKDGVIKAKPKKGISRGRARKRHAQKKKGRRRGPGS   80 (150)
T ss_pred             CchHHHHHHHHHHHHccCcceeeeChHHHHHHHHhhhHHHHHHHHHCCCeeeccccccchHHHHHHHHHHhcccCCCCCc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEK  149 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~  149 (199)
                      |+||++||||+|+.||.+||+||++|++|+++|+||+|+||.||+++|||.|+++++|.+||.+.+.++
T Consensus        81 RKG~k~AR~p~K~~Wi~~IRalR~~Lr~lrd~gkIdk~~YR~lY~~aKGg~fk~~~~L~~~i~~~~~~k  149 (150)
T COG2147          81 RKGTKGARMPSKERWIKRIRALRRELRKLRDDGKIDKHTYRKLYRMAKGGAFKSKSHLKSYIEEAKLLK  149 (150)
T ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHcCCccccHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999999999999999999999999999999999999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	199
2zkr_p	196	Structure Of A Mammalian Ribosomal 60s Subunit With		2e-63
3izr_T	209	Localization Of The Large Subunit Ribosomal Protein		9e-60
4a1a_O	185	T.Thermophila 60s Ribosomal Subunit In Complex With		1e-48
3zf7_T	260	High-resolution Cryo-electron Microscopy Structure		2e-48
2ww9_J	189	Cryo-Em Structure Of The Active Yeast Ssh1 Complex		6e-47
4a17_O	185	T.Thermophila 60s Ribosomal Subunit In Complex With		7e-47
3jyw_P	176	Structure Of The 60s Proteins For Eukaryotic Riboso		8e-44
1s1i_P	142	Structure Of The Ribosomal 80s-Eef2-Sordarin Comple		8e-44
3j21_Q	150	Promiscuous Behavior Of Proteins In Archaeal Riboso		1e-32
3ow2_O	143	Crystal Structure Of Enhanced Macrolide Bound To 50		3e-20
1ffk_M	148	Crystal Structure Of The Large Ribosomal Subunit Fr		3e-20
1s72_P	149	Refined Crystal Structure Of The Haloarcula Marismo		3e-20
3g4s_P	143	Co-Crystal Structure Of Tiamulin Bound To The Large		2e-19

>pdb|2ZKR|PP Chain p, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 196

Iteration: 1
 Score =  238 bits (607), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/193 (65%), Positives = 154/193 (79%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQXXXXXXXXXXXXXXXXXXIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQ                  +Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180
Query: 181 RQELLASYAREDE 193
           ++E++ + ++E+E
Sbjct: 181 KEEIIKTLSKEEE 193

>pdb|3IZR|T Chain T, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 209

Iteration: 1
 Score =  226 bits (575), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 114/158 (72%), Positives = 138/158 (87%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SLKLQKRLA+SV++CGK KVWLDPNE+NEI++ NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIHSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R+  EA++KGRH G+GKR+GT  AR+P KILW+ RMRVLRRLL+KYR+AKKIDKH+Y
Sbjct: 61  SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQ 158
           H +Y+K KGN+FKNKRVLME IHK KAEK+R K LSDQ
Sbjct: 121 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 158

>pdb|4A1A|O Chain O, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 5s Rrna, 5.8s Rrna And Proteins Of Molecule 3. Length = 185

Iteration: 1
 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/158 (63%), Positives = 129/158 (81%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SL+LQKRLAASV++CG+K++WLDPNE +EI++ NSR +IRKLIKDGL++K+   +HSR
Sbjct: 1   MVSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R   EA+RKGRH G GKRKGT NARMP K+LW+ R RVLRRLL+KYR AKKIDKH Y
Sbjct: 61  SRARAFLEAKRKGRHTGSGKRKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQ 158
           H+ Y+ +KGN++KNK VL+E IH  KA+K ++  L+ Q
Sbjct: 121 HEFYLGSKGNLYKNKTVLIEAIHVSKADKIKSDKLTSQ 158

>pdb|3ZF7|T Chain T, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 260

Iteration: 1
 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/158 (63%), Positives = 128/158 (81%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SLKLQ RLAA ++RCG+ +VWLDPNE  EI   NSR+++RKLIKDGL+++KPV VHSR
Sbjct: 1   MVSLKLQARLAADILRCGRGRVWLDPNEAVEIRNANSRKSVRKLIKDGLVMRKPVKVHSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R+ K A+  GRH G G+R+GT  ARMP K LW+ R+R+LRRLL+KYR+ KKID+H+Y
Sbjct: 61  SRWRQMKLAKSMGRHEGTGRREGTREARMPSKDLWMRRLRILRRLLRKYREEKKIDRHIY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQ 158
            +LYMKAKGNVF+NKR LME IHK K EK +A+ L++Q
Sbjct: 121 RELYMKAKGNVFRNKRNLMEHIHKVKNEKKKARQLAEQ 158

>pdb|2WW9|J Chain J, Cryo-Em Structure Of The Active Yeast Ssh1 Complex Bound To The Yeast 80s Ribosome Length = 189

Iteration: 1
 Score =  183 bits (464), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 94/158 (59%), Positives = 126/158 (79%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M++L+ QKRLAASV+  GK+KVWLDPNE +EIA  NSR  IRKL+K+G I+KK V VHS+
Sbjct: 1   MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +RTR + +++R+GRH G+GKRKGT  AR+P +++W+ R+RVLRRLL KYR A KIDKHLY
Sbjct: 61  SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQ 158
           H LY ++KGN FK+KR L+E I + KA+  R K L+++
Sbjct: 121 HVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEE 158

>pdb|4A17|O Chain O, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 5s Rrna, 5.8s Rrna And Proteins Of Molecule 2 Length = 185

Iteration: 1
 Score =  183 bits (464), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 97/147 (65%), Positives = 122/147 (82%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SL+LQKRLAASV++CG+K++WLDPNE +EI++ NSR +IRKLIKDGL++K+   +HSR
Sbjct: 1   MVSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R   EA+RKGRH G GKRKGT NARMP K+LW+ R RVLRRLL+KYR AKKIDKH Y
Sbjct: 61  SRARAFLEAKRKGRHTGSGKRKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKA 147
           H+ Y+ +KGN++KNK VL+E IH  KA
Sbjct: 121 HEFYLGSKGNLYKNKTVLIEAIHVSKA 147

>pdb|3JYW|P Chain P, Structure Of The 60s Proteins For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 176

Iteration: 1
 Score =  172 bits (437), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 115/141 (81%)
Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           ++L+ QKRLAASV+  GK+KVWLDPNE +EIA  NSR  IRKL+K+G I+KK V VHS++
Sbjct: 1   ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKS 60
Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           RTR + +++R+GRH G+GKRKGT  AR+P +++W+ R+RVLRRLL KYR A KIDKHLYH
Sbjct: 61  RTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH 120
Query: 122 QLYMKAKGNVFKNKRVLMEFI 142
            LY ++KGN FK+KR L+E I
Sbjct: 121 VLYKESKGNAFKHKRALVEHI 141

>pdb|1S1I|P Chain P, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h Length = 142

Iteration: 1
 Score =  172 bits (437), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 115/141 (81%)
Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           ++L+ QKRLAASV+  GK+KVWLDPNE +EIA  NSR  IRKL+K+G I+KK V VHS++
Sbjct: 1   ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKS 60
Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           RTR + +++R+GRH G+GKRKGT  AR+P +++W+ R+RVLRRLL KYR A KIDKHLYH
Sbjct: 61  RTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH 120
Query: 122 QLYMKAKGNVFKNKRVLMEFI 142
            LY ++KGN FK+KR L+E I
Sbjct: 121 VLYKESKGNAFKHKRALVEHI 141

>pdb|3J21|Q Chain Q, Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Proteins) Length = 150

Iteration: 1
 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 100/142 (70%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M++LK+Q+R+AA +++CG+ ++W+DP  I+++A   +R++I++LIK+G+I KKP+   SR
Sbjct: 1   MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
            R +   E ++KGRH G G RKG   ARM +K LW+  +R LR+ L+K +  KKID+  Y
Sbjct: 61  YRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFI 142
             LY++AKG  FKNK  L  F+
Sbjct: 121 RMLYIRAKGGQFKNKHQLYLFL 142

>pdb|3OW2|O Chain O, Crystal Structure Of Enhanced Macrolide Bound To 50s Ribosomal Subunit Length = 143

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 75/142 (52%)
Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           + L  QKRLAA V+  GK +VW +P    +IA   +R+++R+L+ +G I  K    +SR 
Sbjct: 1   TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRG 60
Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           R R+ ++ R KG   G G RKG A AR   K  W +R+R  R  L++ R    +    Y 
Sbjct: 61  RARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYR 120
Query: 122 QLYMKAKGNVFKNKRVLMEFIH 143
            LY KA G  F +   L  +I 
Sbjct: 121 DLYDKAGGGEFDSVADLERYID 142

>pdb|1FFK|M Chain M, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution Length = 148

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 75/141 (53%)
Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           + L  QKRLAA V+  GK +VW +P    +IA   +R+++R+L+ +G I  K    +SR 
Sbjct: 1   TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRG 60
Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           R R+ ++ R KG   G G RKG A AR   K  W +R+R  R  L++ R    +    Y 
Sbjct: 61  RARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYR 120
Query: 122 QLYMKAKGNVFKNKRVLMEFI 142
            LY KA G  F +   L  +I
Sbjct: 121 DLYDKAGGGEFDSVADLERYI 141

>pdb|1S72|P Chain P, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution Length = 149

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 75/142 (52%)
Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M+ L  QKRLAA V+  GK +VW +P    +IA   +R+++R+L+ +G I  K    +SR
Sbjct: 1   MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSR 60
Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
            R R+ ++ R  G   G G RKG A AR   K  W +R+R  R  L++ R    +    Y
Sbjct: 61  GRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQY 120
Query: 121 HQLYMKAKGNVFKNKRVLMEFI 142
             LY KA G  F +   L  +I
Sbjct: 121 RDLYDKAGGGEFDSVADLERYI 142

>pdb|3G4S|P Chain P, Co-Crystal Structure Of Tiamulin Bound To The Large Ribosomal Subunit Length = 143

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 74/142 (52%)
Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           + L  QKRLAA V+  GK +VW +P    +IA   +R+++R+L+ +G I  K    +SR 
Sbjct: 1   TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRG 60
Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           R R+ ++ R  G   G G RKG A AR   K  W +R+R  R  L++ R    +    Y 
Sbjct: 61  RARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYR 120
Query: 122 QLYMKAKGNVFKNKRVLMEFIH 143
            LY KA G  F +   L  +I 
Sbjct: 121 DLYDKAGGGEFDSVADLERYID 142
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	199
4a17_O	185	RPL19, 60S ribosomal protein L5; eukaryotic riboso	3e-60
3iz5_T	209	60S ribosomal protein L19 (L19E); eukaryotic ribos	4e-54
3jyw_P	176	60S ribosomal protein L19; eukaryotic ribosome, RA	1e-52
1vq8_P	149	50S ribosomal protein L19E; ribosome 50S, protein-	1e-52
4a1a_O	185	RPL19, 60S ribosomal protein L5; eukaryotic riboso	3e-52
2zkr_p	196	60S ribosomal protein L19; protein-RNA complex, 60	4e-51
3u5e_R	189	60S ribosomal protein L19-A; translation, ribosome	5e-51
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>4a17_O RPL19, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} Length = 185

 Score =  185 bits (470), Expect = 3e-60
 Identities = 97/147 (65%), Positives = 122/147 (82%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SL+LQKRLAASV++CG+K++WLDPNE +EI++ NSR +IRKLIKDGL++K+   +HSR
Sbjct: 1   MVSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R   EA+RKGRH G GKRKGT NARMP K+LW+ R RVLRRLL+KYR AKKIDKH Y
Sbjct: 61  SRARAFLEAKRKGRHTGSGKRKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKA 147
           H+ Y+ +KGN++KNK VL+E IH  KA
Sbjct: 121 HEFYLGSKGNLYKNKTVLIEAIHVSKA 147

>3jyw_P 60S ribosomal protein L19; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} Length = 176

 Score =  165 bits (420), Expect = 1e-52
 Identities = 93/175 (53%), Positives = 122/175 (69%)

Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           ++L+ QKRLAASV+  GK+KVWLDPNE +EIA  NSR  IRKL+K+G I+KK V VHS++
Sbjct: 1   ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKS 60

Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           RTR + +++R+GRH G+GKRKGT  AR+P +++W+ R+RVLRRLL KYR A KIDKHLYH
Sbjct: 61  RTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH 120

Query: 122 QLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREER 176
            LY ++KGN FK+KR L+E I    A  + A   +  A A       A       
Sbjct: 121 VLYKESKGNAFKHKRALVEHIAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 175

>1vq8_P 50S ribosomal protein L19E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.94.1.1 PDB: 1vq4_P* 1vq5_P* 1vq6_P* 1vq7_P* 1s72_P* 1vq9_P* 1vqk_P* 1vql_P* 1vqm_P* 1vqn_P* 1vqo_P* 1vqp_P* 1yhq_P* 1yi2_P* 1yij_P* 1yit_P* 1yj9_P* 1yjn_P* 1yjw_P* 2otj_P* ... Length = 149

 Score =  164 bits (417), Expect = 1e-52
 Identities = 52/148 (35%), Positives = 76/148 (51%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M+ L  QKRLAA V+  GK +VW +P    +IA   +R+++R+L+ +G I  K    +SR
Sbjct: 1   MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
            R R+ ++ R  G   G G RKG A AR   K  W +R+R  R  L++ R    +    Y
Sbjct: 61  GRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAE 148
             LY KA G  F +   L  +I     +
Sbjct: 121 RDLYDKAGGGEFDSVADLERYIDANHGD 148

>4a1a_O RPL19, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1c_O 4a1e_O Length = 185

 Score =  164 bits (417), Expect = 3e-52
 Identities = 108/182 (59%), Positives = 143/182 (78%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M SL+LQKRLAASV++CG+K++WLDPNE +EI++ NSR +IRKLIKDGL++K+   +HSR
Sbjct: 1   MVSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +R R   EA+RKGRH G GKRKGT NARMP K+LW+ R RVLRRLL+KYR AKKIDKH Y
Sbjct: 61  SRARAFLEAKRKGRHTGSGKRKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H+ Y+ +KGN++KNK VL+E IH  KA+K ++  L+ Q EARR K   ++ +R E+ Q+ 
Sbjct: 121 HEFYLGSKGNLYKNKTVLIEAIHVSKADKIKSDKLTSQQEARRAKNTASRAKRNEKAQIV 180

Query: 181 RQ 182
            +
Sbjct: 181 AK 182

>2zkr_p 60S ribosomal protein L19; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Length = 196

 Score =  162 bits (411), Expect = 4e-51
 Identities = 141/195 (72%), Positives = 170/195 (87%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIA  NSRQ IRKLIKDGLII+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           AR RKN  ARRKGRH G GKRKGTANARMP+K+ W+ RMR+LRRLL++YR++KKID+H+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY+K KGNVFKNKR+LME IHK KA+K+R KLL+DQAEARR K KEA+KRREER+Q K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180

Query: 181 RQELLASYAREDEKA 195
           ++E++ + ++E+E  
Sbjct: 181 KEEIIKTLSKEEETK 195

>3u5e_R 60S ribosomal protein L19-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_J 2ww9_J 3izc_T 3izs_T 2wwb_J 3o5h_S 3o58_S 3u5i_R 1s1i_P Length = 189

 Score =  162 bits (410), Expect = 5e-51
 Identities = 109/189 (57%), Positives = 145/189 (76%)

Query: 1   MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSR 60
           M++L+ QKRLAASV+  GK+KVWLDPNE +EIA  NSR  IRKL+K+G I+KK V VHS+
Sbjct: 1   MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK 60

Query: 61  ARTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLY 120
           +RTR + +++R+GRH G+GKRKGT  AR+P +++W+ R+RVLRRLL KYR A KIDKHLY
Sbjct: 61  SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY 120

Query: 121 HQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMK 180
           H LY ++KGN FK+KR L+E I + KA+  R K L+++AEARR K + A+ RR +R+  K
Sbjct: 121 HVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEK 180

Query: 181 RQELLASYA 189
           R  LL   A
Sbjct: 181 RDALLKEDA 189

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 25/184 (13%), Positives = 56/184 (30%), Gaps = 61/184 (33%)

Query: 22  VWLDPNEINEIAITNSRQNIRKLIKDGLIIKKP----VAVHSRARTRKNKEARRKGRHCG 77
           +W D  + + + + N      KL K  L+ K+P    +++ S     K K       H  
Sbjct: 395 IWFDVIKSDVMVVVN------KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH-- 446

Query: 78  FGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDK--------------HL-YH- 121
                                    R ++  Y   K  D               H+ +H 
Sbjct: 447 -------------------------RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 122 -QLYMKAKGNVFKNKRVLMEFIHKK-----KAEKSRAKLLSDQAEAR--RQKVKEAKKRR 173
             +    +  +F+   +   F+ +K      A  +   +L+   + +  +  + +   + 
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY 541

Query: 174 EERI 177
           E  +
Sbjct: 542 ERLV 545

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 5e-04
 Identities = 35/240 (14%), Positives = 74/240 (30%), Gaps = 64/240 (26%)

Query: 1   MSSLKLQKRLAASVMRC---GKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKP--- 54
           MS +K ++R  + + R     + +++ D     +  ++  R      ++  L+  +P   
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS--RLQPYLKLRQALLELRPAKN 152

Query: 55  VAVHSRARTRKNKEARRKGRHCGFGK--------RKGTANARMPQKILWVN--------- 97
           V +                   G GK               +M  KI W+N         
Sbjct: 153 VLIDGVL---------------GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 98  RMRVLRRLL----KKYRQAKKIDKHLYHQL---------YMKAKG---------NVFKNK 135
            + +L++LL      +        ++  ++          +K+K          NV +N 
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNA 256

Query: 136 RVLMEF-IHKKKAEKSRAKLLSDQAEARRQKVKEAKKRREERIQMKRQELLASYAREDEK 194
           +    F +  K    +R K ++D   A                  + + LL  Y     +
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	199
3u5e_R	189	60S ribosomal protein L19-A; translation, ribosome	100.0
4a1a_O	185	RPL19, 60S ribosomal protein L5; eukaryotic riboso	100.0
2zkr_p	196	60S ribosomal protein L19; protein-RNA complex, 60	100.0
3iz5_T	209	60S ribosomal protein L19 (L19E); eukaryotic ribos	100.0
4a17_O	185	RPL19, 60S ribosomal protein L5; eukaryotic riboso	100.0
1vq8_P	149	50S ribosomal protein L19E; ribosome 50S, protein-	100.0
3j21_Q	150	PFEL19, 50S ribosomal protein L19E; archaea, archa	100.0
3jyw_P	176	60S ribosomal protein L19; eukaryotic ribosome, RA	100.0

>3u5e_R 60S ribosomal protein L19-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_J 2ww9_J 3izc_T 3izs_T 2wwb_J 3o5h_S 3o58_S 3u5i_R 4b6a_R 1s1i_P

Probab=100.00  E-value=3.1e-90  Score=580.94  Aligned_cols=188  Identities=57%  Similarity=0.937  Sum_probs=185.2

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++||||||+||+||+++|||||||++||++||||||||+||+||+|+++|++|||||||+++++++++|||+|+|+
T Consensus         1 M~~L~~QKRLAA~VL~cGk~rVWlDPne~~eIa~A~sR~~IRkLIkdG~Ii~Kp~~~~Sr~R~r~~~~ar~kGRh~G~Gk   80 (189)
T 3u5e_R            1 MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGK   80 (189)
T ss_dssp             -CCCHHHHHHHHHHHTSCGGGCEECTTCHHHHHTCCSHHHHHHHHTTTSEECCCCCCCCTHHHHHHHHHHHTTCSCSGGG
T ss_pred             CcchHHHHHHHHHHHCCCCCeeecCHHHHHHHHhhhhHHHHHHHHHCCCeEecCccCCChhHHHHHHHHHHhCCCCCCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAE  160 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQae  160 (199)
                      |+||+|||||+|++||++||+||++|++|||+|+||+|+||+||++||||+|+|+++|+||||+.|||++++|+|+||||
T Consensus        81 RKGt~~AR~p~K~~WmrriR~lRrlLr~~Re~~kID~h~Y~~LY~kaKGn~Fknk~~L~e~I~k~kae~~r~k~l~dqae  160 (189)
T 3u5e_R           81 RKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAE  160 (189)
T ss_dssp             CCSCHHHHSCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHhhh
Q psy17505        161 ARRQKVKEAKKRREERIQMKRQELLASY  188 (199)
Q Consensus       161 Arr~k~k~~r~rr~~r~~~kk~~~~~~~  188 (199)
                      |+|++++++++++++++|+++++|+++.
T Consensus       161 a~r~k~k~~~~r~~~~~~~k~~~~~~~~  188 (189)
T 3u5e_R          161 ARRLKNRAARDRRAQRVAEKRDALLKED  188 (189)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSTTHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999998763

>4a1a_O RPL19, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1c_O 4a1e_O

Probab=100.00  E-value=5.1e-88  Score=565.79  Aligned_cols=178  Identities=61%  Similarity=0.992  Sum_probs=145.8

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++||||||+||+||+++|||||||++||++||||||||+||+||+|+++|++|||||||+++++++++|||+|+|+
T Consensus         1 M~~L~~QKRLAA~VL~cGk~rVWlDPne~~eIa~A~sR~~IRkLIkdG~Ii~Kp~~~~Sr~R~r~~~~ar~kGRh~G~Gk   80 (185)
T 4a1a_O            1 MVSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSRSRARAFLEAKRKGRHTGSGK   80 (185)
T ss_dssp             -CCCHHHHHHHHHHHTSCGGGEEECSSSHHHHHHCCSHHHHHHHHHHTSEEECCCCCCCCHHHHHHHHHHHHTSSCCSTT
T ss_pred             CcchHHHHHHHHHHhCCCCcccccChHHHHHHHhcccHHHHHHHHHCCCeeecCCCCCChHHHHHHHHHHHhCCCCCCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAE  160 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQae  160 (199)
                      |+||+|||||+|++||++||+||++|++|||+|+||+|+||+||++||||+|+|+++|+||||++|||++++|+|+||||
T Consensus        81 RKGt~~AR~p~K~~WmrriR~lRrlLr~~Re~~kID~h~Y~~LY~kaKGn~Fknk~~L~e~I~k~kae~~r~k~l~dqae  160 (185)
T 4a1a_O           81 RKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQYHEFYLGSKGNLYKNKTVLIEAIHVSKADKIKSDKLTSQQE  160 (185)
T ss_dssp             CCSCHHHHSCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTC-------------
T ss_pred             cccchhccCChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHH
Q psy17505        161 ARRQKVKEAKKRREERIQ  178 (199)
Q Consensus       161 Arr~k~k~~r~rr~~r~~  178 (199)
                      |+|+|++++++++++++|
T Consensus       161 a~r~k~k~~r~~~~~~~~  178 (185)
T 4a1a_O          161 ARRAKNTASRAKRNEKAQ  178 (185)
T ss_dssp             ------------------
T ss_pred             HHHHHHHHHHHhHHHHHH
Confidence            999999999999999887

>2zkr_p 60S ribosomal protein L19; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}

Probab=100.00  E-value=1.7e-87  Score=566.60  Aligned_cols=194  Identities=73%  Similarity=1.139  Sum_probs=158.0

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++|||||||+++++++++|||+||||
T Consensus         1 M~~L~~QKRLAA~VL~cG~~rVWlDP~~~~eI~~A~sR~~IR~LIkdG~I~~Kp~~~~SR~R~r~~~~ar~kGRh~G~Gk   80 (196)
T 2zkr_p            1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGK   80 (196)
T ss_dssp             --------CHHHHHHTSCGGGEEECSTTHHHHHHCCSHHHHHHHHHHTSEEECCCCC-CCHHHHHHHHHHHHTCCCC---
T ss_pred             CcchHHHHHHHHHHHCCCcCceecChHHHHHHHHhhhHHHHHHHHHCCCeEecCcccccHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAE  160 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQae  160 (199)
                      |+||+|||||+|++||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|++|||+.|||++++++|+||||
T Consensus        81 RKGt~~AR~p~K~~Wm~riR~lRrlLr~~Re~~kID~~~Yr~LY~kaKGn~Fknk~~L~e~I~~~Kae~~r~k~l~~q~e  160 (196)
T 2zkr_p           81 RKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAE  160 (196)
T ss_dssp             ---CHHHHSCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTC-----------------CHHHHHHHHHHHH
T ss_pred             CcCcccccCcHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHhhhhhHhhH
Q psy17505        161 ARRQKVKEAKKRREERIQMKRQELLASYAREDEK  194 (199)
Q Consensus       161 Arr~k~k~~r~rr~~r~~~kk~~~~~~~~~~~e~  194 (199)
                      |+|++++++++++++++++++++|+.+++.++|+
T Consensus       161 a~r~k~k~~r~~r~~~~~~~~~~~~~~~~~~~~~  194 (196)
T 2zkr_p          161 ARRSKTKEARKRREERLQAKKEEIIKTLSKEEET  194 (196)
T ss_dssp             HHHTTTHHHHHHHHHHHHHHTTHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            9999999999999999999999999999888765

>4a17_O RPL19, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila}

Probab=100.00  E-value=6.4e-83  Score=534.75  Aligned_cols=165  Identities=59%  Similarity=0.961  Sum_probs=161.9

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++||||||+||+||++||||||||++||++||||||||+||+||+|+++|++|||||||+++++++++|||+|+|+
T Consensus         1 M~~L~~QKRLAAsVL~cGk~rVWlDPne~~eIa~A~sR~~IRkLIkdGlIi~Kpv~~~SR~R~r~~~~ar~kGRh~G~Gk   80 (185)
T 4a17_O            1 MVSLRLQKRLAASVLKCGQKRLWLDPNESSEISMANSRASIRKLIKDGLVMKRSTVIHSRSRARAFLEAKRKGRHTGSGK   80 (185)
T ss_dssp             -CCCHHHHHHHHHHHTSCGGGEEECSTTHHHHHHCCSHHHHHHHHHHTSEEECCCCCCCCHHHHHHHHHHHHTSSCCSTT
T ss_pred             CcchHHHHHHHHHHhCCCCCeeecChHHHHHHHhcccHHHHHHHHHCCCEEeCCcccCChHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHHHHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSDQAE  160 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dQae  160 (199)
                      |+||+|||||+|++||+|||+||++|++|||+|+||+|+||+||++||||+|+|+++|+||||+.|||++++|+|+||||
T Consensus        81 RKGt~~AR~p~K~~WmrRiR~LRrlLr~~Re~~kID~h~Yr~LY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~dqae  160 (185)
T 4a17_O           81 RKGTRNARMPTKVLWMRRQRVLRRLLRKYRAAKKIDKHQYHEFYLGSKGNLYKNKTVLIEAIHVSKAXXXXXXXXXXXXX  160 (185)
T ss_dssp             CCSCHHHHSCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccCCChHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHhcCCCcCCHHHHHHHHHHHHhhhccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHh
Q psy17505        161 ARRQK  165 (199)
Q Consensus       161 Arr~k  165 (199)
                      |.-.-
T Consensus       161 a~~~~  165 (185)
T 4a17_O          161 XXXXX  165 (185)
T ss_dssp             HHHHH
T ss_pred             ccccc
Confidence            97543

>1vq8_P 50S ribosomal protein L19E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.94.1.1 PDB: 1vq4_P* 1vq5_P* 1vq6_P* 1vq7_P* 1s72_P* 1vq9_P* 1vqk_P* 1vql_P* 1vqm_P* 1vqn_P* 1vqo_P* 1vqp_P* 1yhq_P* 1yi2_P* 1yij_P* 1yit_P* 1yj9_P* 1yjn_P* 1yjw_P* 2otj_P* ...

Probab=100.00  E-value=2.3e-77  Score=487.80  Aligned_cols=149  Identities=35%  Similarity=0.585  Sum_probs=142.7

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+++|++||||+||+++++++++|||+||||
T Consensus         1 M~~l~~QKRLAA~vL~cG~~rVw~DP~~~~eI~~A~sR~~IR~LIkdG~I~~kp~~~~Sr~R~r~~~~~r~kGR~~G~Gk   80 (149)
T 1vq8_P            1 MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGS   80 (149)
T ss_dssp             -CCCHHHHHHHHHHTTSCGGGEEECGGGHHHHHHCCSHHHHHHHHHTTSEEECCCCCCCCHHHHHHHHHHHTTCSCSGGG
T ss_pred             CcchHHHHHHHHHHHCCCcCceecCHHHHHHHHhcccHHHHHHHHHCCCeEeccccCccHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHH
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEK  149 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~  149 (199)
                      |+||+|||||+|++||++||+||++|++|||+|+||+|+||.||++||||+|+|+++|+||||+.++|+
T Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~Re~~kID~~~Yr~lY~kaKGn~Fknk~~L~~~I~~~~~~~  149 (149)
T 1vq8_P           81 RKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDANHGDA  149 (149)
T ss_dssp             CCSCHHHHSCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTTCCSSHHHHHHHHTC-----
T ss_pred             CcCcccccCcHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCCHHHHHHHHHHhccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999874

>3j21_Q PFEL19, 50S ribosomal protein L19E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=100.00  E-value=5.4e-77  Score=486.03  Aligned_cols=146  Identities=44%  Similarity=0.853  Sum_probs=144.3

Q ss_pred             CCchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCC
Q psy17505          1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGK   80 (199)
Q Consensus         1 m~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~Gk   80 (199)
                      |++|++||||||+||+||+++|||||||++||++||||||||+||+||+|+++|++|||||||+++++++++|||+|+|+
T Consensus         1 m~~l~~QKRLAa~vL~cGk~rVWlDP~e~~eIa~A~sR~~IRkLIkdG~I~~kp~~~~Sr~R~r~~~~~r~kGR~~G~Gk   80 (150)
T 3j21_Q            1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGS   80 (150)
T ss_dssp             CCCCHHHHHHHHHHHTSCGGGEEECTTCHHHHHTCCSHHHHHHHHHTTSEEECCCCCCCCHHHHHHHHHHHTTCSCSTTT
T ss_pred             CcchHHHHHHHHHHHcCCcceeecChHHHHHHHhcccHHHHHHHHHCCCeEecCCcCcCHHHHHHHHHHHHhcccCCCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHh
Q psy17505         81 RKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKK  146 (199)
Q Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~K  146 (199)
                      |+||+|||||+|++||++||+||++|++|||+|+||+|+||+||++||||+|+|+++|+|||+...
T Consensus        81 RkGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~LY~kaKGn~Fknk~~L~e~i~~~~  146 (150)
T 3j21_Q           81 RKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQLYLFLEEHG  146 (150)
T ss_dssp             CCSCHHHHSCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCSCHHHHHHHHHHHS
T ss_pred             ccCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcCcHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999999999999999999999753

>3jyw_P 60S ribosomal protein L19; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=100.00  E-value=2.9e-73  Score=474.05  Aligned_cols=156  Identities=58%  Similarity=0.953  Sum_probs=152.3

Q ss_pred             CchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCc
Q psy17505          2 SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKR   81 (199)
Q Consensus         2 ~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkR   81 (199)
                      ++|++||||||+||+||++||||||||++||++||||||||+||+||+|+++|++||||+|||++++++++|||+|+|+|
T Consensus         1 ~~l~~QKRLAa~vL~cG~~rVWlDP~e~~eIa~A~sR~~IRkLIkdG~I~~kp~~~~Sr~R~r~~~~~r~kGr~~G~GkR   80 (176)
T 3jyw_P            1 ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKR   80 (176)
T ss_dssp             CCCHHHHHHHHHHHTCCTTTEECCSSCCHHHHHCCSHHHHHHHHHHTCSEECCCCCCCSHHHHHHHHHHTTTSSCSSSSC
T ss_pred             CCcHHHHHHHHHHhCCCCCccccChHHHHHHHhhccHHHHHHHHHCCCEEeCCCcCCChHHHHHHHHHHhcCCCCCCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHHHHhhHHHHhhhhHH
Q psy17505         82 KGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIHKKKAEKSRAKLLSD  157 (199)
Q Consensus        82 kGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~k~Kae~~r~k~l~d  157 (199)
                      +||+|||||+|++||++||+||++|++|||+|+||+|+||.||+++|||+|+|+++|++|||++|+|+++....+.
T Consensus        81 kGt~~AR~p~K~~Wm~riR~lRrlLr~yRe~gkIDk~lYr~LY~kaKGn~Fknk~~L~e~I~k~ka~~~~~~~~~~  156 (176)
T 3jyw_P           81 KGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIAAAAAAAAAAAAAAA  156 (176)
T ss_dssp             SSCTTCSSCHHHHHHHHHHHHHHHHSTTTTTTSSCSTTTTTTGGGTTTTCCCSTTHHHHCTTTTGGGGHHHHHHGG
T ss_pred             cccccccCChHHHHHHHHHHHHHHHHHHhhCCCCCchhhHHHHHHhcCCEechHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	199
d1vqop1	143	a.94.1.1 (P:1-143) Ribosomal protein L19 (L19e) {A	6e-59

>d1vqop1 a.94.1.1 (P:1-143) Ribosomal protein L19 (L19e) {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 143

class: All alpha proteins
fold: Ribosomal protein L19 (L19e)
superfamily: Ribosomal protein L19 (L19e)
family: Ribosomal protein L19 (L19e)
domain: Ribosomal protein L19 (L19e)
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score =  179 bits (456), Expect = 6e-59
 Identities = 51/142 (35%), Positives = 74/142 (52%)

Query: 2   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRA 61
           + L  QKRLAA V+  GK +VW +P    +IA   +R+++R+L+ +G I  K    +SR 
Sbjct: 1   TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRG 60

Query: 62  RTRKNKEARRKGRHCGFGKRKGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYH 121
           R R+ ++ R  G   G G RKG A AR   K  W +R+R  R  L++ R    +    Y 
Sbjct: 61  RARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYR 120

Query: 122 QLYMKAKGNVFKNKRVLMEFIH 143
            LY KA G  F +   L  +I 
Sbjct: 121 DLYDKAGGGEFDSVADLERYID 142

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	199
d1vqop1	143	Ribosomal protein L19 (L19e) {Archaeon Haloarcula	100.0

>d1vqop1 a.94.1.1 (P:1-143) Ribosomal protein L19 (L19e) {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: All alpha proteins
fold: Ribosomal protein L19 (L19e)
superfamily: Ribosomal protein L19 (L19e)
family: Ribosomal protein L19 (L19e)
domain: Ribosomal protein L19 (L19e)
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=100.00  E-value=6.4e-73  Score=457.12  Aligned_cols=142  Identities=36%  Similarity=0.595  Sum_probs=140.9

Q ss_pred             CchhhHHHHHHHHhhcCCCceecCccchhhHhhhhhhHHHHHHhhcCceeecCCCccchhhhHHhHHHHhcCcCCCCCCc
Q psy17505          2 SSLKLQKRLAASVMRCGKKKVWLDPNEINEIAITNSRQNIRKLIKDGLIIKKPVAVHSRARTRKNKEARRKGRHCGFGKR   81 (199)
Q Consensus         2 ~~l~~QKRLAA~vL~cGk~kVWlDPne~~eI~~A~sR~~IRkLIkdG~Ii~kp~~~~Sr~R~r~~~~ak~kGRh~G~GkR   81 (199)
                      +||++|+||||+||+||+++||||||+++||++||||+|||+||+||+|+.+|++||||+|++++++++++|||+|+|+|
T Consensus         1 snL~~QKRLAa~vL~~G~~rVw~DP~~~~eI~~A~tr~dIR~LI~dG~I~~kp~kg~Sr~R~r~~~~~k~kGr~~G~GkR   80 (143)
T d1vqop1           1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSR   80 (143)
T ss_dssp             CCCHHHHHHHHHHTTSCGGGEEECGGGHHHHHTCCSHHHHHHHHHTTSEEECCCCCCCCHHHHHHHHHHHTTCSCSGGGC
T ss_pred             CchHHHHHHHHHHHCCCCCeeeeChHHHHHHHHhhhHHHHHHHHHCCCEEeCCCCCCcHHHHHHHHHHHHhCCCCCcCCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCchhHHHHHHHHHHHHHHHHHHhcCCCChHhhHHHHHhhhCCCcccHHHHHHHHH
Q psy17505         82 KGTANARMPQKILWVNRMRVLRRLLKKYRQAKKIDKHLYHQLYMKAKGNVFKNKRVLMEFIH  143 (199)
Q Consensus        82 kGt~~AR~p~K~~Wm~riR~lRrlLr~~re~~kID~~~Y~~lY~kaKGn~Fknk~~L~e~I~  143 (199)
                      +||+|||||+|+.||++||+||++|++|+|+|+||+|+||+||++||||+|+|++||++||+
T Consensus        81 KGt~~AR~p~K~~Wm~riR~lRr~Lk~lr~~~~Id~~~Yr~LY~kaKGn~Fknk~~L~~~I~  142 (143)
T d1vqop1          81 KGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYID  142 (143)
T ss_dssp             CSCHHHHSCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCCSSHHHHHHHHT
T ss_pred             cCcccccCCchhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCcccCHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999996