Psyllid ID: psy17599

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINLWLISYQGRCSRR
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHccHHHHHHccccccHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mfssmcnivwsfpaiplssimadikdldLYGLLELTIDCSEQDIRSAYRKKAlkchpdknpddekAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENerykgykvnksEEEILQQEIDRLRkegkyplkpvLYVFRINLWLISYQGRCSRR
Flexible Loop (DISEMBL)
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKAlkchpdknpddEKAIETFHLLSKAIEVLLDKSARAaydsvirrkeevkirnskldatrkkfkedlerrekeaenerykgykvnkseeeiLQQEIDRLRKEGKYPLKPVLYVFRINLWLISYQGRCSRR
Low Complexity Region (SEG)
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINLWLISYQGRCSRR
Disordered region (IsUnstruct)
****MCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKAL************AIETFHLLSKAIEVLLDKSARAAYDSVI*******************************************************LRKEGKYPLKPVLYVFRINLWLISYQG*****
Disordered Region (DISOPRED)
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSV****************************************************************************************
Disordered Region (DISEMBL)
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFK**************YKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINLWLISYQGRCSRR
Disordered Region (DISPRO)
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVK*RNSKLDATRKKFKEDLERREKEAENE***********EEILQQEIDRLRKEGKYPLKPVLYVFRINLWLISYQGRC***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSSMCNIVWSFPAIPLSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIRxxxxxxxxxxxxxxxxxxxxxxxxxxxxGxxxxxxxxxxxxxxxxxxxxxGKYPLKPVLYVFRINLWLISYQGRCSRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	180	2.2.26 [Sep-21-2011]
Q91WT4	303	DnaJ homolog subfamily C	yes	N/A	0.772	0.458	0.442	2e-26
Q2KI83	304	DnaJ homolog subfamily C	yes	N/A	0.766	0.453	0.446	1e-25
Q9NVM6	304	DnaJ homolog subfamily C	yes	N/A	0.766	0.453	0.453	1e-25
Q9P7C6	289	Pre-mRNA-splicing factor	yes	N/A	0.683	0.425	0.377	1e-13
C5BQ32	376	Chaperone protein DnaJ OS	yes	N/A	0.35	0.167	0.571	8e-12
Q5FGQ8	382	Chaperone protein DnaJ OS	yes	N/A	0.35	0.164	0.555	1e-11
Q5HCG4	382	Chaperone protein DnaJ OS	yes	N/A	0.35	0.164	0.555	1e-11
A6QBG7	377	Chaperone protein DnaJ OS	yes	N/A	0.372	0.177	0.462	2e-11
A6Q486	373	Chaperone protein DnaJ OS	yes	N/A	0.361	0.174	0.507	8e-11
Q10209	392	Uncharacterized J domain-	no	N/A	0.422	0.193	0.454	1e-10

>sp|Q91WT4|DJC17_MOUSE DnaJ homolog subfamily C member 17 OS=Mus musculus GN=Dnajc17 PE=2 SV=2

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 94/140 (67%), Gaps = 1/140 (0%)

Query: 19  SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
           ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct: 2   AVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query: 79  VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
           VL D +ARAAYD V + K++   R  +LD  RKK K DLE RE++A+    +  + ++S 
Sbjct: 62  VLTDAAARAAYDKVRKAKKQAAERTQRLDENRKKVKLDLEARERQAQAHGSEEEEESRS- 120

Query: 139 EEILQQEIDRLRKEGKYPLK 158
              L+QEI RLR+EG   L+
Sbjct: 121 ATTLEQEIARLREEGSRQLE 140

Mus musculus (taxid: 10090)

>sp|Q2KI83|DJC17_BOVIN DnaJ homolog subfamily C member 17 OS=Bos taurus GN=DNAJC17 PE=2 SV=1

 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 89/139 (64%), Gaps = 1/139 (0%)

Query: 19  SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
           ++  ++  +DLY LL +     +++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct: 2   AVTKELLQMDLYALLGIEEKAEDKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query: 79  VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
           VL D +ARAAYD V + K++   R  KLD  RKK K DLE RE++A+       +     
Sbjct: 62  VLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLDLEARERQAQA-LGSEEEEESGS 120

Query: 139 EEILQQEIDRLRKEGKYPL 157
              L+QEI+RLR+EG   L
Sbjct: 121 ARTLEQEIERLREEGSRQL 139

Bos taurus (taxid: 9913)

>sp|Q9NVM6|DJC17_HUMAN DnaJ homolog subfamily C member 17 OS=Homo sapiens GN=DNAJC17 PE=1 SV=1

 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 95/139 (68%), Gaps = 1/139 (0%)

Query: 19  SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
           ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct: 2   AVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query: 79  VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
           VL D +ARAAYD V + K++   R  KLD  RKK K DLE RE++A+ +  +  + ++S 
Sbjct: 62  VLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRS- 120

Query: 139 EEILQQEIDRLRKEGKYPL 157
              L+QEI+RLR+EG   L
Sbjct: 121 TRTLEQEIERLREEGSRQL 139

Homo sapiens (taxid: 9606)

>sp|Q9P7C6|CWC23_SCHPO Pre-mRNA-splicing factor cwf23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf23 PE=1 SV=2

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 27  LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSAR 86
           +D Y LL +  D  +Q+I  A+RK +LK HPDKNP+D KA E FH+L  A   L+D   R
Sbjct: 8   IDYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLR 67

Query: 87  AAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEI 146
            AYDS    K   K R    +  RK   +DL  RE++     Y   +  ++E + LQ+++
Sbjct: 68  KAYDSERFAKLARKRREEAFNFQRKSMVDDLRERERQF----YDSLEKKENERDRLQEKL 123

Query: 147 DRLRKEG 153
             L++E 
Sbjct: 124 RALQEES 130

Involved in pre-mRNA splicing. May be involved in endoplasmic reticulum-associated protein degradation (ERAD) and required for growth at low and high temperatures.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|C5BQ32|DNAJ_TERTT Chaperone protein DnaJ OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaJ PE=3 SV=1

 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 43/63 (68%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  D SEQD++ AYRK A+K HPD+NPDD  A E F   S+A EVL DK  RA
Sbjct: 5  DYYEVLGVARDVSEQDLKKAYRKVAMKFHPDRNPDDASAEEKFKEASEAYEVLSDKQKRA 64

Query: 88 AYD 90
          AYD
Sbjct: 65 AYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Teredinibacter turnerae (strain ATCC 39867 / T7901) (taxid: 377629)

>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel) GN=dnaJ PE=3 SV=1

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y LL L+ + + ++I+ AYRK ALK HPDKNP D+ A E F  LS+A +VL+DK  RA
Sbjct: 5  DYYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRA 64

Query: 88 AYD 90
          AYD
Sbjct: 65 AYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Ehrlichia ruminantium (strain Gardel) (taxid: 302409)

>sp|Q5HCG4|DNAJ_EHRRW Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y LL L+ + + ++I+ AYRK ALK HPDKNP D+ A E F  LS+A +VL+DK  RA
Sbjct: 5  DYYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRA 64

Query: 88 AYD 90
          AYD
Sbjct: 65 AYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Ehrlichia ruminantium (strain Welgevonden) (taxid: 254945)

>sp|A6QBG7|DNAJ_SULNB Chaperone protein DnaJ OS=Sulfurovum sp. (strain NBC37-1) GN=dnaJ PE=3 SV=1

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 48/67 (71%)

Query: 24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
          + ++D Y +LE++ DCS  +++ AYRK ALK HPD+NPDD++A E F ++++A +VL D 
Sbjct: 1  MSEMDYYEVLEVSRDCSGAELKKAYRKLALKYHPDRNPDDQEAEEKFKIVNEAYQVLSDD 60

Query: 84 SARAAYD 90
            R  YD
Sbjct: 61 EKRTIYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Sulfurovum sp. (strain NBC37-1) (taxid: 387093)

>sp|A6Q486|DNAJ_NITSB Chaperone protein DnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1

 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 47/65 (72%)

Query: 26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
          D+D Y LLE+  + S ++I+ AYRK ALK HPD+NPD+ +A E F L+++A +VL D+  
Sbjct: 3  DIDYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEK 62

Query: 86 RAAYD 90
          RA YD
Sbjct: 63 RALYD 67

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Nitratiruptor sp. (strain SB155-2) (taxid: 387092)

>sp|Q10209|YAY1_SCHPO Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.01 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 21 MADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEV 79
          MA   D + Y LL ++ D +  DI+ AYRK A+K HPDKNPDD + A E F  +S+A +V
Sbjct: 1  MATPVDTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQV 60

Query: 80 LLDKSARAAYDSVIRRK 96
          L D+  R+ YD   + K
Sbjct: 61 LGDEKLRSQYDQFGKEK 77

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
157103359	300	hypothetical protein AaeL_AAEL000042 [Ae	0.738	0.443	0.544	2e-34
118780738	308	AGAP003825-PA [Anopheles gambiae str. PE	0.738	0.431	0.536	2e-33
378466099	289	DnaJ-15 [Bombyx mori]	0.705	0.439	0.541	6e-33
357610892	293	hypothetical protein KGM_10805 [Danaus p	0.705	0.433	0.553	1e-32
312378028	305	hypothetical protein AND_10507 [Anophele	0.738	0.436	0.572	2e-32
195329904	299	GM26112 [Drosophila sechellia] gi|194120	0.711	0.428	0.534	5e-31
195571795	299	GD18742 [Drosophila simulans] gi|1941998	0.711	0.428	0.526	7e-31
194902094	299	GG17232 [Drosophila erecta] gi|190652289	0.711	0.428	0.511	4e-30
170044161	305	conserved hypothetical protein [Culex qu	0.738	0.436	0.547	5e-30
195055472	307	GH17349 [Drosophila grimshawi] gi|193892	0.711	0.416	0.511	6e-30

>gi|157103359|ref|XP_001647945.1| hypothetical protein AaeL_AAEL000042 [Aedes aegypti] gi|108884777|gb|EAT49002.1| AAEL000042-PA [Aedes aegypti]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 21  MADIK---DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
           M D+K   ++DLYGLL + I  +E ++R AYRKKAL+CHPDKNPD+ KA E F  LSKA+
Sbjct: 1   MVDVKKFSEIDLYGLLGIEIGATEAEVRKAYRKKALQCHPDKNPDNPKAAELFQELSKAL 60

Query: 78  EVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKS 137
           E+L+D SARAAYD ++  K+  ++R  +LD+ R+K KEDLE RE++A      GYKV K+
Sbjct: 61  EILIDASARAAYDKLLSAKKAAQLRTQQLDSKRQKLKEDLEERERKAREAAKGGYKVQKT 120

Query: 138 EEEILQQEIDRLRKEG 153
            EE+ Q+E +RLRKEG
Sbjct: 121 PEELFQEEFERLRKEG 136

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118780738|ref|XP_310387.5| AGAP003825-PA [Anopheles gambiae str. PEST] gi|116131006|gb|EAA06109.3| AGAP003825-PA [Anopheles gambiae str. PEST]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 101/138 (73%), Gaps = 5/138 (3%)

Query: 21  MADIK---DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
           M D+K   D+D+YGLLE+ I  +EQ+IR AYRKKAL+CHPDKNPD+ KA + F  LSKA+
Sbjct: 1   MVDVKKFSDIDIYGLLEVDIAATEQEIRKAYRKKALQCHPDKNPDNPKAAQLFQELSKAL 60

Query: 78  EVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKV--N 135
           E+L+D SARAAYD ++  K+  ++R  +LD+ R+K K DLE RE++A+     GYK   +
Sbjct: 61  EILMDVSARAAYDRLLNAKKAAQLRTKQLDSKRQKLKADLEERERQAKEAASGGYKTASS 120

Query: 136 KSEEEILQQEIDRLRKEG 153
           K+ EE+ Q+E  RLRKEG
Sbjct: 121 KTPEELFQEEFKRLRKEG 138

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|378466099|gb|AFC01229.1| DnaJ-15 [Bombyx mori]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 71/131 (54%), Positives = 100/131 (76%), Gaps = 4/131 (3%)

Query: 23  DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLD 82
           +I+++DLY +L+L I  +E +I+ AYRKKAL+CHPDKNPDD KA ETFH LS+A+E+L D
Sbjct: 5   NIEEIDLYAVLDLQITATESEIKKAYRKKALQCHPDKNPDDPKAAETFHELSQALEILTD 64

Query: 83  KSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEIL 142
            SARAAYD V+R K   K+R+ +LD+ R+K KEDLE+RE+EA +    G   N ++ + L
Sbjct: 65  TSARAAYDKVLRAKASAKLRHQELDSKRQKLKEDLEKREREAAS----GTHTNLTDSQRL 120

Query: 143 QQEIDRLRKEG 153
            +EI+RL++EG
Sbjct: 121 AKEIERLQREG 131

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357610892|gb|EHJ67197.1| hypothetical protein KGM_10805 [Danaus plexippus]

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 99/130 (76%), Gaps = 3/130 (2%)

Query: 24  IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
           I+D+DLY +L++ I  ++ +I+ AYRKKAL+CHPDKNPD+ KA ETFH LS A+E+L DK
Sbjct: 6   IEDVDLYAILDIQITATDSEIKKAYRKKALQCHPDKNPDNPKAAETFHELSHALEILTDK 65

Query: 84  SARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQ 143
           +ARAAYD V+R K   K+R+ +LD+ R+K KEDLERRE+EA      G K N ++E+ L 
Sbjct: 66  AARAAYDKVLRAKAAAKLRHQELDSKRQKLKEDLERREREAA---LGGSKDNLTDEQKLA 122

Query: 144 QEIDRLRKEG 153
           +EI RL++EG
Sbjct: 123 EEIKRLQREG 132

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312378028|gb|EFR24710.1| hypothetical protein AND_10507 [Anopheles darlingi]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/138 (57%), Positives = 98/138 (71%), Gaps = 5/138 (3%)

Query: 21  MADIK---DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
           M D+K   D DLYGL E+ I  +EQ+IR AYRKKAL+CHPDKNPD+ KA + F  LSKA+
Sbjct: 1   MVDVKKFSDTDLYGLFEVDIGATEQEIRKAYRKKALQCHPDKNPDNPKAAQLFQELSKAL 60

Query: 78  EVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKV--N 135
           E+LLD SARAAYD ++  K+  K+R  +LD  R+K K DLE RE+ A  E   GYK   N
Sbjct: 61  EILLDTSARAAYDKLLNAKKAAKLRTKQLDGKRQKLKADLEERERRAREEATGGYKTASN 120

Query: 136 KSEEEILQQEIDRLRKEG 153
           K+ EE+ Q+E DRLRKEG
Sbjct: 121 KTPEELFQEEFDRLRKEG 138

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195329904|ref|XP_002031650.1| GM26112 [Drosophila sechellia] gi|194120593|gb|EDW42636.1| GM26112 [Drosophila sechellia]

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/131 (53%), Positives = 102/131 (77%), Gaps = 3/131 (2%)

Query: 26  DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
           D++LY LL ++++C + +IR AYRKKAL+CHPDKNPD+ KA+E FH LSKA+E+L D+SA
Sbjct: 8   DVNLYDLLGISLECDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESA 67

Query: 86  RAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENE--RYKGYK-VNKSEEEIL 142
           RAAYD V++ K+  ++R  +LD  R+K K +LE RE+ A ++  R + Y  V KS+EE+L
Sbjct: 68  RAAYDKVLKAKKAAELRTRQLDGKRQKLKLELEEREQAALHKLARSRPYSTVTKSDEEVL 127

Query: 143 QQEIDRLRKEG 153
           Q++I+RLR+EG
Sbjct: 128 QEQIERLRREG 138

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195571795|ref|XP_002103888.1| GD18742 [Drosophila simulans] gi|194199815|gb|EDX13391.1| GD18742 [Drosophila simulans]

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 69/131 (52%), Positives = 100/131 (76%), Gaps = 3/131 (2%)

Query: 26  DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
           D++LY LL ++++C + +IR AYRKKAL+CHPDKNPD+ KA+E FH LSKA+E+L D+SA
Sbjct: 8   DVNLYDLLGISLECDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESA 67

Query: 86  RAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKG---YKVNKSEEEIL 142
           RAAYD V++ K+  ++R  +LD  R+K K +LE RE+ A ++  K      V KS+EE+L
Sbjct: 68  RAAYDKVLKAKKAAELRTRQLDGKRQKLKLELEEREQAALHKLAKSRPYSTVTKSDEEVL 127

Query: 143 QQEIDRLRKEG 153
           Q++I+RLR+EG
Sbjct: 128 QEQIERLRREG 138

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194902094|ref|XP_001980586.1| GG17232 [Drosophila erecta] gi|190652289|gb|EDV49544.1| GG17232 [Drosophila erecta]

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 100/131 (76%), Gaps = 3/131 (2%)

Query: 26  DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
           D++LY LL ++++  + +IR AYRKKAL CHPDKNPD  +A+E+FH LSKA+E+L D+SA
Sbjct: 8   DVNLYDLLGISLEADQNEIRKAYRKKALDCHPDKNPDSPQAVESFHELSKALEILTDESA 67

Query: 86  RAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGY---KVNKSEEEIL 142
           RAAYD V++ K+  ++R+ +LD  R+K K++LE RE+ A ++  K      V KS+EE+L
Sbjct: 68  RAAYDKVLKAKKAAELRSRQLDGKRQKLKQELEERERAALHKLAKSQPYSTVAKSDEEVL 127

Query: 143 QQEIDRLRKEG 153
           Q++I+RLR+EG
Sbjct: 128 QEQIERLRREG 138

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170044161|ref|XP_001849725.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167867422|gb|EDS30805.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 98/137 (71%), Gaps = 4/137 (2%)

Query: 21  MADIK---DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
           M D+K   ++DLYGLL   I  +E +IR AYRKKAL+CHPDKNPD+ KA E F  LSKA+
Sbjct: 1   MVDVKKFSEIDLYGLLGAEISATEAEIRKAYRKKALQCHPDKNPDNPKAAELFQELSKAL 60

Query: 78  EVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENE-RYKGYKVNK 136
           E+LLD SAR+AYD ++  K+  ++R  +LD+ R+K K DLE RE+ A      K YKVNK
Sbjct: 61  EILLDASARSAYDKLLNAKKAAQLRTQQLDSKRQKLKNDLEERERRAREAGSGKAYKVNK 120

Query: 137 SEEEILQQEIDRLRKEG 153
           + EE+ Q+E +RLRKEG
Sbjct: 121 TPEELFQEEFERLRKEG 137

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195055472|ref|XP_001994643.1| GH17349 [Drosophila grimshawi] gi|193892406|gb|EDV91272.1| GH17349 [Drosophila grimshawi]

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 100/131 (76%), Gaps = 3/131 (2%)

Query: 26  DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
           D++LY LL ++I+  + +IR AYRK+AL CHPDKNPD+ +A E FH LSKA+E+L D SA
Sbjct: 9   DVNLYELLGVSIEAEQAEIRKAYRKRALDCHPDKNPDNPQAAERFHELSKALEILSDASA 68

Query: 86  RAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGY---KVNKSEEEIL 142
           RAAYD V++ K+  ++R  +LD+ R+K KE+LE+RE+ A ++   G    KV+KS+EE+L
Sbjct: 69  RAAYDKVLKAKKAAELRTKQLDSKRQKLKEELEQRERAALSKLQAGQPYSKVSKSDEEVL 128

Query: 143 QQEIDRLRKEG 153
            ++++RLR+EG
Sbjct: 129 HEQVERLRREG 139

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
FB|FBgn0037882	299	CG17187 [Drosophila melanogast	0.711	0.428	0.519	2.9e-32
ZFIN|ZDB-GENE-040426-894	307	dnajc17 "DnaJ (Hsp40) homolog,	0.733	0.429	0.485	4.4e-29
UNIPROTKB|Q9NVM6	304	DNAJC17 "DnaJ homolog subfamil	0.772	0.457	0.45	1.2e-28
UNIPROTKB|E1C0R0	304	DNAJC17 "Uncharacterized prote	0.744	0.440	0.492	3.1e-28
UNIPROTKB|E2RGH7	304	DNAJC17 "Uncharacterized prote	0.772	0.457	0.45	3.9e-28
UNIPROTKB|F1SST1	304	DNAJC17 "Uncharacterized prote	0.772	0.457	0.45	6.4e-28
MGI|MGI:1916658	303	Dnajc17 "DnaJ (Hsp40) homolog,	0.772	0.458	0.442	1.7e-27
UNIPROTKB|Q2KI83	304	DNAJC17 "DnaJ homolog subfamil	0.772	0.457	0.45	2.2e-27
RGD|1308015	303	Dnajc17 "DnaJ (Hsp40) homolog,	0.772	0.458	0.435	2.8e-27
RGD|1565752	303	RGD1565752 "similar to RIKEN c	0.772	0.458	0.407	1.2e-24

FB|FBgn0037882 CG17187 [Drosophila melanogaster (taxid:7227)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 68/131 (51%), Positives = 100/131 (76%)

Query:    26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
             D++LY LL ++++  + +IR AYRKKAL+CHPDKNPD+ KA+E FH LSKA+E+L D+SA
Sbjct:     8 DVNLYDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESA 67

Query:    86 RAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKG--YK-VNKSEEEIL 142
             RAAYD V++ K+  ++R+ +LD  R+K K +LE RE+ A ++  K   Y  V KS+EE+L
Sbjct:    68 RAAYDKVLKAKKAAELRSRQLDGKRQKLKLELEERERAALHKLAKSQPYSTVAKSDEEVL 127

Query:   143 QQEIDRLRKEG 153
              ++I+RLR+EG
Sbjct:   128 HEQIERLRREG 138

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

ZFIN|ZDB-GENE-040426-894 dnajc17 "DnaJ (Hsp40) homolog, subfamily C, member 17" [Danio rerio (taxid:7955)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 66/136 (48%), Positives = 94/136 (69%)

Query:    23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLD 82
             ++ ++DLY LL +    +E+ I+ AYR++AL CHPDKNPD+ KA E FH LS+A+EVL D
Sbjct:     6 ELLEMDLYALLGVESTSTEKQIKKAYRQRALSCHPDKNPDNPKAAELFHQLSQALEVLTD 65

Query:    83 KSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEIL 142
              +A+AAYD V   K++ + RN KLD  RKK K DLE RE+ AEN + +  K+ ++    L
Sbjct:    66 AAAKAAYDKVRAAKKQAEERNRKLDDKRKKIKLDLEARERRAENVKAEEVKITRT----L 121

Query:   143 QQEIDRLRKEGKYPLK 158
             ++EI RLR+EG   L+
Sbjct:   122 EEEIARLREEGSRELQ 137

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9NVM6 DNAJC17 "DnaJ homolog subfamily C member 17" [Homo sapiens (taxid:9606)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 63/140 (45%), Positives = 96/140 (68%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 AVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +ARAAYD V + K++   R  KLD  RKK K DLE RE++A+ +  +  + ++S 
Sbjct:    62 VLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRST 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+QEI+RLR+EG   L+
Sbjct:   122 RT-LEQEIERLREEGSRQLE 140

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|E1C0R0 DNAJC17 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 67/136 (49%), Positives = 91/136 (66%)

Query:    23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLD 82
             D+  LDLYGLL +    SE++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+ VL D
Sbjct:     6 DLLQLDLYGLLGVGEKASEKEVKKAYRQKALTCHPDKNPDNPQAAEVFHQLSQALAVLTD 65

Query:    83 KSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEIL 142
              +ARAAYD V + K++   R  KLD  RKK K DLE RE+EA+    +  ++  +    L
Sbjct:    66 AAARAAYDKVRKAKKQAAERTQKLDEKRKKVKLDLEAREREAQARDNEEEEIRITRT--L 123

Query:   143 QQEIDRLRKEGKYPLK 158
             +QEI RLR+EG   L+
Sbjct:   124 EQEIIRLREEGSRQLE 139

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2RGH7 DNAJC17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 63/140 (45%), Positives = 94/140 (67%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 AVAKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +ARAAYD V + K++   R  KLD  RKK K DLE RE++A+       + ++S 
Sbjct:    62 VLTDTAARAAYDKVRKAKKQAAERTQKLDERRKKVKLDLEARERQAQAHGSDDEEESRST 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+QEI+RLR+EG   L+
Sbjct:   122 RT-LEQEIERLREEGSRQLE 140

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1SST1 DNAJC17 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 63/140 (45%), Positives = 94/140 (67%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 AVTKELLQMDLYALLGIGEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +ARAAYD V + K++   R  KLD  RKK K DLE RE +A+    +  + ++S 
Sbjct:    62 VLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLDLEARELQAQTHGSEEEEESRSA 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+QEI+RLR+EG   L+
Sbjct:   122 RT-LEQEIERLREEGSRQLE 140

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1916658 Dnajc17 "DnaJ (Hsp40) homolog, subfamily C, member 17" [Mus musculus (taxid:10090)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 62/140 (44%), Positives = 94/140 (67%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 AVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +ARAAYD V + K++   R  +LD  RKK K DLE RE++A+    +  + ++S 
Sbjct:    62 VLTDAAARAAYDKVRKAKKQAAERTQRLDENRKKVKLDLEARERQAQAHGSEEEEESRSA 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+QEI RLR+EG   L+
Sbjct:   122 TT-LEQEIARLREEGSRQLE 140

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q2KI83 DNAJC17 "DnaJ homolog subfamily C member 17" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 63/140 (45%), Positives = 93/140 (66%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  ++  +DLY LL +     +++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 AVTKELLQMDLYALLGIEEKAEDKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +ARAAYD V + K++   R  KLD  RKK K DLE RE++A+    +  + + S 
Sbjct:    62 VLTDAAARAAYDKVRKAKKQAAERTQKLDERRKKVKLDLEARERQAQALGSEEEEESGSA 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+QEI+RLR+EG   L+
Sbjct:   122 RT-LEQEIERLREEGSRQLE 140

GO:0003723 "RNA binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1308015 Dnajc17 "DnaJ (Hsp40) homolog, subfamily C, member 17" [Rattus norvegicus (taxid:10116)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 61/140 (43%), Positives = 95/140 (67%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  ++  +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 AVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNPDNPRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +ARAAYD V + +++   R  +LD  RKK K DLE RE++A+ +  +  + ++S 
Sbjct:    62 VLTDAAARAAYDKVRKARKQAAERTQRLDEKRKKVKLDLEARERQAQAQGTEEEEESRST 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+QEI RLR+EG   L+
Sbjct:   122 TT-LEQEIARLREEGSRQLE 140

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1565752 RGD1565752 "similar to RIKEN cDNA 1700025B16" [Rattus norvegicus (taxid:10116)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 57/140 (40%), Positives = 91/140 (65%)

Query:    19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE 78
             ++  +   +DLY LL +    ++++++ AYR+KAL CHPDKNPD+ +A E FH LS+A+E
Sbjct:     2 ALTKEFLQMDLYTLLGIEEKATDKEVKKAYRQKALSCHPDKNPDNLRAAELFHQLSQALE 61

Query:    79 VLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSE 138
             VL D +AR AYD   + ++    R  +LD  RKK K DLE RE++A+ +  +  + ++S 
Sbjct:    62 VLTDAAARTAYDKERKARKRAAERTQRLDENRKKLKLDLEARERQAQAQGTEEEEESRST 121

Query:   139 EEILQQEIDRLRKEGKYPLK 158
                L+Q+I RL++EG   L+
Sbjct:   122 TT-LEQKIARLQEEGSRQLE 140

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	180
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-20
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	7e-19
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	2e-17
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	9e-17
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	2e-14
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	4e-14
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	5e-14
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	1e-13
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	4e-13
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	4e-13
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	6e-13
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	6e-13
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-12
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	6e-12
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	1e-11
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	2e-11
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-11
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	4e-11
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	6e-11
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	1e-10
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	2e-10
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	2e-10
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-09
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	2e-09
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	2e-09
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	3e-09
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	8e-09
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	1e-08
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	2e-08
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	4e-08
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	4e-07
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	9e-07
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	5e-06
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-05
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	1e-05
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-05
PHA03102	153	PHA03102, PHA03102, Small T antigen; Reviewed	8e-05
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	2e-04
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	3e-04
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	0.004

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 79.5 bits (197), Expect = 2e-20
 Identities = 32/63 (50%), Positives = 41/63 (65%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  D S+++I+ AYRK ALK HPDKNP D  A E F  +++A EVL D   RA
Sbjct: 1  DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 88 AYD 90
           YD
Sbjct: 61 IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 82.1 bits (204), Expect = 7e-19
 Identities = 31/63 (49%), Positives = 43/63 (68%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++ + SE +I+ AYRK A+K HPD+NP D++A E F  + +A EVL D   RA
Sbjct: 5  DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64

Query: 88 AYD 90
          AYD
Sbjct: 65 AYD 67

Length = 371

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 71.8 bits (177), Expect = 2e-17
 Identities = 29/55 (52%), Positives = 39/55 (70%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLD 82
          D Y +L +  D S+++I+ AYRK ALK HPDKNPDD +A E F  +++A EVL D
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 76.1 bits (188), Expect = 9e-17
 Identities = 32/63 (50%), Positives = 44/63 (69%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++ D SE++I+ AYRK A K HPD+NP D++A E F  +++A EVL D   RA
Sbjct: 5  DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRA 64

Query: 88 AYD 90
          AYD
Sbjct: 65 AYD 67

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 69.5 bits (171), Expect = 2e-14
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++ D SE++I+ AYRK A K HPD+N D E A E F  +++A EVL D   RA
Sbjct: 1  DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKE-AEEKFKEINEAYEVLSDPEKRA 59

Query: 88 AYD 90
           YD
Sbjct: 60 QYD 62

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 68.6 bits (168), Expect = 4e-14
 Identities = 30/63 (47%), Positives = 42/63 (66%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++ D SE +I+ AYRK AL+ HPD+NPD+ +A + F   ++A EVL D   RA
Sbjct: 5  DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA 64

Query: 88 AYD 90
           YD
Sbjct: 65 RYD 67

Length = 373

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 63.0 bits (154), Expect = 5e-14
 Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDK 83
          D Y +L +  D S  +I+ AYRK ALK HPDKNP D E+A E F  +++A EVL D 
Sbjct: 2  DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDP 58

Length = 60

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 67.1 bits (164), Expect = 1e-13
 Identities = 30/63 (47%), Positives = 42/63 (66%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +T D SE++I+ +YRK A+K HPD+NP D++A E F   ++A EVL D   R 
Sbjct: 5  DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRG 64

Query: 88 AYD 90
           YD
Sbjct: 65 IYD 67

Length = 366

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 65.9 bits (161), Expect = 4e-13
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y  L ++ D S ++I+ AYRK A + HPD NP D  A E F  +S+A +VL D + R 
Sbjct: 10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69

Query: 88 AYD 90
           YD
Sbjct: 70 EYD 72

Length = 392

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 66.0 bits (161), Expect = 4e-13
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L L    S+ +I+ A+RK A+K HPDKN  +++A E F  +++A +VL D   +A
Sbjct: 5  DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKA 64

Query: 88 AYD 90
           YD
Sbjct: 65 QYD 67

Length = 380

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 65.6 bits (160), Expect = 6e-13
 Identities = 29/64 (45%), Positives = 42/64 (65%)

Query: 27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSAR 86
          +D Y +L ++   S ++I+ AYRK A+K HPDKNP D +A + F  +S+A EVL D   R
Sbjct: 1  MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKR 60

Query: 87 AAYD 90
           +YD
Sbjct: 61 ESYD 64

Length = 391

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 65.5 bits (160), Expect = 6e-13
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D YGLL ++ + S+ +I+ AYRK A + HPD NP DE+A E F  +S A EVL D   R 
Sbjct: 4  DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRR 62

Query: 88 AYD 90
            D
Sbjct: 63 IVD 65

Length = 378

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 64.9 bits (158), Expect = 1e-12
 Identities = 27/63 (42%), Positives = 41/63 (65%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++   +  +I+ AYRKKA++ HPDKNP D++A E F   ++A +VL D   R+
Sbjct: 6  DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRS 65

Query: 88 AYD 90
           YD
Sbjct: 66 RYD 68

Length = 386

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 62.5 bits (152), Expect = 6e-12
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++    + +I+ AYRK ALK HPDKNPD+++A E F  +++A EVL +   R 
Sbjct: 4  DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRR 63

Query: 88 AYD 90
           YD
Sbjct: 64 RYD 66

Length = 397

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 61.8 bits (150), Expect = 1e-11
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSAR 86
          +D Y LL ++   S  +I+SAYRK ALK HPD+N  ++ A E F  +++A  VL D   R
Sbjct: 2  MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKR 60

Query: 87 AAYD 90
          A YD
Sbjct: 61 AHYD 64

Length = 371

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 61.0 bits (148), Expect = 2e-11
 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 4/62 (6%)

Query: 29 LYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAA 88
          LY +L L+ DC+  +I+ AYRK A+K HPDK  D EK    F  +S+A EVL D   R  
Sbjct: 30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEK----FKEISRAYEVLSDPEKRKI 85

Query: 89 YD 90
          YD
Sbjct: 86 YD 87

Length = 421

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 60.6 bits (147), Expect = 2e-11
 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L L+ D S +DI+ AYRK A+K HPDKN  +  A E F  +S+A  VL D   RA
Sbjct: 6  DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKN-KEPDAEEKFKEISEAYAVLSDAEKRA 64

Query: 88 AYD 90
           YD
Sbjct: 65 QYD 67

Length = 377

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  D +E +I+ AYRK A + HPD N  D KA E F  +S+A +VL D+  R 
Sbjct: 10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69

Query: 88 AYD 90
           YD
Sbjct: 70 EYD 72

Length = 389

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 59.4 bits (144), Expect = 6e-11
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 21 MADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVL 80
          MA  KD   Y +L +  + +E++I+ AYR+ A K HPD NP D++A + F  +++A E+L
Sbjct: 1  MAAKKDY--YEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEIL 58

Query: 81 LDKSARAAYD 90
           D   RA YD
Sbjct: 59 SDPQKRAQYD 68

Length = 386

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKN--PDDEKAIETFHLLSKAIEVLLDKSA 85
          + Y  L ++ D S+ +I+ AYRK + K HPD N  P  E   E +  + +A E L D   
Sbjct: 5  EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAE---EKYKEVQEAYETLSDPQK 61

Query: 86 RAAYD 90
          RAAYD
Sbjct: 62 RAAYD 66

Length = 380

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 25/67 (37%), Positives = 43/67 (64%)

Query: 24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
          + +   Y +L ++   ++++I+SAYRK A+K HPDKN  ++++ E F   ++A E+L D 
Sbjct: 1  MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDP 60

Query: 84 SARAAYD 90
            R AYD
Sbjct: 61 KKRQAYD 67

Length = 372

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 57.7 bits (139), Expect = 2e-10
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L L+   S+ +I+ AYRK A+K HPDKN  +++A   F   ++A EVL+D + RA
Sbjct: 4  DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63

Query: 88 AYD 90
           YD
Sbjct: 64 QYD 66

Length = 365

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 54.8 bits (131), Expect = 2e-09
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEK-AIETFHLLSKAIEVLLDK 83
            LD Y +L +  + S ++I+ AYRK ALK HPD+NP D K A E F  +++A E+L D 
Sbjct: 4  DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDP 63

Query: 84 SARAAYD 90
            RA YD
Sbjct: 64 ERRAEYD 70

Length = 237

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++ D  + +++ AYR+ A K HPD N  +  A + F  +++A EVL D   RA
Sbjct: 4  DYYEILGVSRDADKDELKRAYRRLARKYHPDVN-KEPGAEDRFKEINRAYEVLSDPETRA 62

Query: 88 AYD 90
           YD
Sbjct: 63 RYD 65

Length = 374

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++   S+ +I+ AYRK + K HPD N  +E A E F  +S+A EVL D   RA
Sbjct: 5  DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN-KEEGADEKFKEISEAYEVLSDDQKRA 63

Query: 88 AYD 90
           YD
Sbjct: 64 QYD 66

Length = 376

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 54.7 bits (131), Expect = 3e-09
 Identities = 28/65 (43%), Positives = 43/65 (66%)

Query: 26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
          +L  Y +LE+    +++ I+ +YRK ALK HPD+N  D++A E F L+++A  VL D+  
Sbjct: 2  ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKK 61

Query: 86 RAAYD 90
          RA YD
Sbjct: 62 RALYD 66

Length = 369

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 53.3 bits (128), Expect = 8e-09
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  +  +++I+ AYRK A K HPD + ++E A E F  +S+A  VL D   R 
Sbjct: 6  DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDDEKRQ 64

Query: 88 AYD 90
           YD
Sbjct: 65 RYD 67

Length = 378

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 53.0 bits (127), Expect = 1e-08
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
          +K  D Y +L ++   SEQ+IR AYRK A + HPD N   + A +    +++A +VLLDK
Sbjct: 1  MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPD-AHDKMVEINEAADVLLDK 59

Query: 84 SARAAYD 90
            R  YD
Sbjct: 60 DKRKQYD 66

Length = 372

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE-KAIETFHLLSKAIEVLLDKSAR 86
          D Y +L +  + S++DI+ A+R+ A K HPD +P ++ +A E F  +S+A EVL D   R
Sbjct: 4  DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKR 63

Query: 87 AAYD 90
            YD
Sbjct: 64 RQYD 67

Length = 365

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 51.3 bits (123), Expect = 4e-08
 Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEK-AIETFHLLSKAIEVLLDKSAR 86
          D Y +L ++ + ++++I+ AY++   + HPD++P++ K A + F  + +A EVL D   R
Sbjct: 5  DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 87 AAYD 90
          A YD
Sbjct: 65 AMYD 68

Length = 369

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++ + ++++I+ AYR+ A K HPD N + E A E F  +++A +VL D   R 
Sbjct: 4  DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPE-AEEKFKEINEAYQVLSDPEKRK 62

Query: 88 AYD 90
           YD
Sbjct: 63 LYD 65

Length = 382

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 47.9 bits (113), Expect = 9e-07
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  D  EQ+I+ A+RK A K HPD+N     A   F  +++A +VL +   RA
Sbjct: 3  DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN-KAPDAASIFAEINEANDVLSNPKKRA 61

Query: 88 AYD 90
           YD
Sbjct: 62 NYD 64

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 45.2 bits (107), Expect = 5e-06
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 5/65 (7%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPD--KNPDDEKAIETFHLLSKAIEVLLDKSA 85
          D Y ++ +      + I++AYR+ A K HPD  K PD E     F  +++A EVL D+  
Sbjct: 5  DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAE---ARFKEVAEAWEVLSDEQR 61

Query: 86 RAAYD 90
          RA YD
Sbjct: 62 RAEYD 66

Length = 306

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++   S+ D++ AY K A + HPD   D + A + F  ++ A +VL D+  RA
Sbjct: 4  DYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRA 62

Query: 88 AYD 90
          AYD
Sbjct: 63 AYD 65

Length = 372

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  + S+ +I+ A++K A K HPD N     A E F  +++A  VL D   R 
Sbjct: 5  DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPG-AEEKFKEINEAYTVLSDPEKRR 63

Query: 88 AYDS 91
           YD+
Sbjct: 64 IYDT 67

Length = 291

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)

Query: 17  LSSIMADIKDL-----DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNP---DDEKAI- 67
           L S +  +K       D Y +L +  D SE+DI+  YR  ++K HPDK P   ++ ++  
Sbjct: 83  LISNIRTLKIEYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEY 142

Query: 68  -ETFHLLSKAIEVLLDKSARAAY 89
            E +  ++KA  +L DK  R  Y
Sbjct: 143 EEKYKTITKAYGLLTDKKRRENY 165

Length = 610

>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 32 LLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKA 76
          LL L      +   +R AY +K L+ HPDK  D+EK  E   L  K 
Sbjct: 10 LLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKF 56

Length = 153

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 29 LYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKA 66
          L  LL L +    +   +R AY +K  + HPDK  D+EK 
Sbjct: 13 LMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKM 52

Length = 647

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPD--KNPDDEKAIETFHLLSKAIEVLLDKSA 85
          D Y +L +  + S  +++ AYRK A K HPD  K PD E   + F  + +A + L D   
Sbjct: 5  DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAE---DKFKEVKEAYDTLSDPQK 61

Query: 86 RAAYD 90
          +A YD
Sbjct: 62 KAHYD 66

Length = 371

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 23  DIKDLDLYGLLELTI---DCSEQDIRSAYRKKALKCHPDKNPDDEK--AIETFHLLSKAI 77
           + K +DLY LL L+          I  A++KK  K HPDK          E F L+ KA 
Sbjct: 39  NWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAR 98

Query: 78  EVLLDKSARAAYDSV 92
           EVL D+  R  YDS 
Sbjct: 99  EVLGDRKLRLQYDSN 113

Length = 379

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
KOG0713|consensus	336		99.92
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.91
KOG0691|consensus	296		99.9
PRK14288	369	chaperone protein DnaJ; Provisional	99.85
PRK14279	392	chaperone protein DnaJ; Provisional	99.83
KOG0716|consensus	279		99.83
PRK14296	372	chaperone protein DnaJ; Provisional	99.83
PRK14286	372	chaperone protein DnaJ; Provisional	99.82
KOG0712|consensus	337		99.81
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.81
PRK14282	369	chaperone protein DnaJ; Provisional	99.8
PRK14294	366	chaperone protein DnaJ; Provisional	99.8
PRK14277	386	chaperone protein DnaJ; Provisional	99.8
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.79
PRK14285	365	chaperone protein DnaJ; Provisional	99.79
PRK14301	373	chaperone protein DnaJ; Provisional	99.79
PRK14287	371	chaperone protein DnaJ; Provisional	99.79
PRK14295	389	chaperone protein DnaJ; Provisional	99.79
PRK14297	380	chaperone protein DnaJ; Provisional	99.79
PRK14283	378	chaperone protein DnaJ; Provisional	99.78
PRK14299	291	chaperone protein DnaJ; Provisional	99.78
PRK14284	391	chaperone protein DnaJ; Provisional	99.78
PRK14276	380	chaperone protein DnaJ; Provisional	99.78
PRK10767	371	chaperone protein DnaJ; Provisional	99.78
KOG0718|consensus	546		99.78
PRK14291	382	chaperone protein DnaJ; Provisional	99.77
KOG0717|consensus	508		99.77
PRK14298	377	chaperone protein DnaJ; Provisional	99.77
PRK14281	397	chaperone protein DnaJ; Provisional	99.77
PRK14280	376	chaperone protein DnaJ; Provisional	99.77
PRK14278	378	chaperone protein DnaJ; Provisional	99.77
PRK14289	386	chaperone protein DnaJ; Provisional	99.76
PRK14290	365	chaperone protein DnaJ; Provisional	99.74
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.74
PRK05014	171	hscB co-chaperone HscB; Provisional	99.73
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.73
KOG0721|consensus	230		99.73
PRK14300	372	chaperone protein DnaJ; Provisional	99.73
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.73
KOG0715|consensus	288		99.72
PRK14292	371	chaperone protein DnaJ; Provisional	99.72
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.72
PRK14293	374	chaperone protein DnaJ; Provisional	99.72
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.71
KOG0719|consensus	264		99.71
PRK03578	176	hscB co-chaperone HscB; Provisional	99.71
PRK01356	166	hscB co-chaperone HscB; Provisional	99.71
PRK00294	173	hscB co-chaperone HscB; Provisional	99.66
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.66
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.61
PHA03102	153	Small T antigen; Reviewed	99.59
KOG0720|consensus	490		99.56
KOG1150|consensus	250		99.5
PRK01773	173	hscB co-chaperone HscB; Provisional	99.49
KOG0722|consensus	329		99.48
KOG0624|consensus	504		99.42
PTZ00100	116	DnaJ chaperone protein; Provisional	99.4
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.38
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.37
KOG0714|consensus	306		99.35
KOG0550|consensus	486		99.34
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.33
PHA02624	647	large T antigen; Provisional	99.25
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	99.1
KOG3192|consensus	168		98.67
KOG1789|consensus	2235		98.41
KOG0723|consensus	112		98.27
KOG0568|consensus	342		98.23
KOG0431|consensus	453		97.37
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	97.03
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.87
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	95.54
PF13446	62	RPT: A repeated domain in UCH-protein	87.87
KOG1029|consensus	1118		86.78

>KOG0713|consensus

Probab=99.92  E-value=3e-25  Score=187.63  Aligned_cols=80  Identities=43%  Similarity=0.590  Sum_probs=73.5

Q ss_pred             hhcccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy17599         19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEE   98 (180)
Q Consensus        19 ~~~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~   98 (180)
                      +......+.|||+||||+.+|+..+||+|||+||++|||||||++|.|.+.|+.|+.||+|||||.+|..||.++.....
T Consensus         8 ~~~~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~   87 (336)
T KOG0713|consen    8 GAEAVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLK   87 (336)
T ss_pred             hhhhhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhc
Confidence            33444567899999999999999999999999999999999999999999999999999999999999999999966554

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=5.9e-25  Score=189.52  Aligned_cols=74  Identities=43%  Similarity=0.627  Sum_probs=70.1

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEE   98 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~   98 (180)
                      ...|||+||||+.+||.++||+|||+||++||||+|++++.|.++|+.|++||+|||||.+|+.||+++.+...
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~   75 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK   75 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence            46799999999999999999999999999999999998899999999999999999999999999999876653

>KOG0691|consensus

Probab=99.90  E-value=3e-23  Score=174.81  Aligned_cols=105  Identities=45%  Similarity=0.644  Sum_probs=98.7

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhhh
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIRNSK  105 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~~~~~~~  105 (180)
                      ..|||.||||++++|..+|++||+..++.|||||||++|.|.+.|+.|.+||+||+||..|..||.++........+...
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~~d~   83 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGREDQ   83 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhhhhH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999888888889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17599        106 LDATRKKFKEDLERREKEAENERYK  130 (180)
Q Consensus       106 ~~~~r~~~~e~le~rE~~~~~~~~~  130 (180)
                      .+.++..|..++.+++..+.....+
T Consensus        84 ~~~~r~~f~~dl~~~~~~~~a~~~~  108 (296)
T KOG0691|consen   84 ADGFRKKFGSDLFERERGALALLKE  108 (296)
T ss_pred             HHHHHHHhhhhhhhhHHHHHhHHhh
Confidence            9999999999999999977765433

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.8e-21  Score=169.46  Aligned_cols=70  Identities=40%  Similarity=0.675  Sum_probs=66.4

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      +.|||+||||+++||.++||+|||++|++||||+|++++.|.+.|+.|++||+||+||.+|+.||.++..
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~   71 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK   71 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence            4699999999999999999999999999999999987788999999999999999999999999998754

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=6.9e-21  Score=167.01  Aligned_cols=69  Identities=42%  Similarity=0.631  Sum_probs=66.2

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ..|||+||||+++|+.++||+|||+++++||||++++++.|.+.|+.|++||+||+||.+|+.||.++.
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~   76 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR   76 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence            579999999999999999999999999999999998778899999999999999999999999999874

>KOG0716|consensus

Probab=99.83  E-value=1.9e-20  Score=154.37  Aligned_cols=77  Identities=36%  Similarity=0.572  Sum_probs=71.5

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVK  100 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~~  100 (180)
                      ....|+|+||||+++|+.++||++||+++++||||+++++|++..+|+.||.||.||+||.+|..||.++.-.....
T Consensus        28 ~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~l~  104 (279)
T KOG0716|consen   28 VIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLKLA  104 (279)
T ss_pred             cchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHHHH
Confidence            34789999999999999999999999999999999999999999999999999999999999999999987665543

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=1.2e-20  Score=164.55  Aligned_cols=69  Identities=39%  Similarity=0.556  Sum_probs=65.1

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||++|++||||+|+ ++.|.+.|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~   71 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA   71 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence            469999999999999999999999999999999997 477899999999999999999999999998754

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=2.3e-20  Score=162.77  Aligned_cols=70  Identities=36%  Similarity=0.605  Sum_probs=66.4

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||+|++++.+.+.|+.|++||+||+||.+|..||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   72 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKA   72 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCch
Confidence            4699999999999999999999999999999999987788899999999999999999999999998754

>KOG0712|consensus

Probab=99.81  E-value=4e-20  Score=157.76  Aligned_cols=69  Identities=48%  Similarity=0.678  Sum_probs=65.0

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKE   97 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~   97 (180)
                      +..||.||||+++||..+||+|||+|+++|||||||+   +.++|..|+.||+|||||.+|..||+++....
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~   71 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL   71 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence            5789999999999999999999999999999999986   68999999999999999999999999996654

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.81  E-value=8.9e-20  Score=120.81  Aligned_cols=63  Identities=41%  Similarity=0.682  Sum_probs=59.8

Q ss_pred             chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHHcCCHHHHHHHH
Q psy17599         28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE-KAIETFHLLSKAIEVLLDKSARAAYD   90 (180)
Q Consensus        28 d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~iL~dp~~R~~YD   90 (180)
                      |||+||||+++++.++|+++|+++++.+|||++++++ .+...|..|+.||++|+||..|..||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6999999999999999999999999999999987655 57899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=1.1e-19  Score=158.40  Aligned_cols=70  Identities=30%  Similarity=0.563  Sum_probs=65.2

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||+|+++ +.|.+.|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~   73 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYV   73 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcc
Confidence            46999999999999999999999999999999999864 66889999999999999999999999998753

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=1.4e-19  Score=157.40  Aligned_cols=70  Identities=43%  Similarity=0.653  Sum_probs=66.5

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||++++++.+.+.|..|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~   72 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHE   72 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccc
Confidence            4799999999999999999999999999999999987788899999999999999999999999998754

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=1.4e-19  Score=158.43  Aligned_cols=70  Identities=37%  Similarity=0.612  Sum_probs=66.3

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||++++++.+.+.|+.|++||+||+||.+|..||.++..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~   73 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHA   73 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence            3699999999999999999999999999999999987788899999999999999999999999998754

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.79  E-value=7.3e-20  Score=161.70  Aligned_cols=68  Identities=43%  Similarity=0.684  Sum_probs=62.7

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      +...|||+||||+++||.++||+|||++|++||||+|++    .+.|+.|++||+||+||.+|+.||.++..
T Consensus        25 ~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~   92 (421)
T PTZ00037         25 VDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEE   92 (421)
T ss_pred             ccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence            345799999999999999999999999999999999863    47999999999999999999999998764

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.2e-19  Score=157.85  Aligned_cols=69  Identities=41%  Similarity=0.622  Sum_probs=65.9

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      .|||+||||+++||.++||+|||+++++||||+|++++.+.+.|+.|++||+||+||.+|..||.++..
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~   71 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT   71 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcc
Confidence            699999999999999999999999999999999987788899999999999999999999999998754

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.6e-19  Score=157.44  Aligned_cols=70  Identities=43%  Similarity=0.655  Sum_probs=66.3

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||++++++.+.+.|+.|++||+||+||.+|..||.++..
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~   72 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHA   72 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcccc
Confidence            4699999999999999999999999999999999987788889999999999999999999999998754

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=2.1e-19  Score=156.66  Aligned_cols=69  Identities=32%  Similarity=0.479  Sum_probs=64.7

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||+|++ +.+.+.|+.|++||++|+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~   71 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHT   71 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCc
Confidence            4699999999999999999999999999999999974 77889999999999999999999999998753

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=2e-19  Score=157.65  Aligned_cols=66  Identities=42%  Similarity=0.651  Sum_probs=63.6

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDS   91 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~   91 (180)
                      ..|||+||||+++||.++||+|||+++++||||++++++.+.+.|+.|++||+||+||.+|+.||.
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~   73 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDE   73 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHH
Confidence            469999999999999999999999999999999998777889999999999999999999999998

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.6e-19  Score=157.79  Aligned_cols=70  Identities=37%  Similarity=0.579  Sum_probs=66.2

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||++++++.+.+.|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~   72 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTA   72 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcc
Confidence            3699999999999999999999999999999999987788899999999999999999999999998754

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=2.6e-19  Score=156.39  Aligned_cols=69  Identities=36%  Similarity=0.530  Sum_probs=65.2

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||+|++ +.+.+.|+.|++||++|+||.+|..||.++..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~   72 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA   72 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence            5799999999999999999999999999999999984 78899999999999999999999999998754

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=3.2e-19  Score=150.91  Aligned_cols=69  Identities=33%  Similarity=0.479  Sum_probs=64.9

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||+++ ++.+.+.|+.|++||++|+||.+|..||.++..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~   71 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT   71 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence            469999999999999999999999999999999997 577889999999999999999999999998754

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=2.8e-19  Score=156.79  Aligned_cols=69  Identities=42%  Similarity=0.662  Sum_probs=65.7

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      .|||+||||+++||.++||+|||+++++||||+|++++.+.+.|+.|++||+||+||.+|..||.++..
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   69 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD   69 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence            489999999999999999999999999999999998788999999999999999999999999998754

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=2.9e-19  Score=156.18  Aligned_cols=69  Identities=36%  Similarity=0.520  Sum_probs=64.7

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||+|++ +.+.+.|+.|++||++|+||.+|+.||.++..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   71 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAA   71 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCc
Confidence            4699999999999999999999999999999999984 67889999999999999999999999998753

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=3.8e-19  Score=155.00  Aligned_cols=70  Identities=44%  Similarity=0.675  Sum_probs=66.1

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||++++++.+.+.|..|++||++|+||.+|..||.++..
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHA   72 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcccc
Confidence            4699999999999999999999999999999999987788889999999999999999999999998754

>KOG0718|consensus

Probab=99.78  E-value=4.5e-19  Score=155.11  Aligned_cols=76  Identities=36%  Similarity=0.614  Sum_probs=68.8

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD---EKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEE   98 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~   98 (180)
                      ...+.|||.+||||++||.++|++|||++++.|||||..++   ..|.+.|+.|..||+||+||.+|+.||.++.....
T Consensus         5 e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    5 ELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             ccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            34567999999999999999999999999999999998643   34788999999999999999999999999987775

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=4.7e-19  Score=154.98  Aligned_cols=69  Identities=33%  Similarity=0.535  Sum_probs=65.0

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||+|++ +.+.+.|+.|++||+||+||.+|..||.++..
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~   70 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA   70 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhccc
Confidence            3699999999999999999999999999999999985 77889999999999999999999999998764

>KOG0717|consensus

Probab=99.77  E-value=6.3e-19  Score=153.99  Aligned_cols=71  Identities=44%  Similarity=0.656  Sum_probs=66.2

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ...++||+||||..+|++.+|+++||++||+|||||||+. .++++.|+.|+.||+|||||..|+.||....
T Consensus         5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre   76 (508)
T KOG0717|consen    5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE   76 (508)
T ss_pred             hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence            3467999999999999999999999999999999998865 6789999999999999999999999998776

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=5.3e-19  Score=154.44  Aligned_cols=69  Identities=45%  Similarity=0.625  Sum_probs=64.5

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||+|++ +.+.+.|+.|++||+||+||.+|+.||.++..
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   72 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHA   72 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcc
Confidence            3699999999999999999999999999999999974 77889999999999999999999999998753

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=5.6e-19  Score=155.22  Aligned_cols=70  Identities=40%  Similarity=0.627  Sum_probs=66.2

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRK   96 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~   96 (180)
                      .|||+||||+++|+.++||+|||+++++||||++++++.+.+.|+.|++||++|+||.+|..||.++...
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~   72 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAG   72 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchh
Confidence            5999999999999999999999999999999999877788899999999999999999999999987643

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=6.3e-19  Score=153.88  Aligned_cols=69  Identities=41%  Similarity=0.568  Sum_probs=64.6

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++||+|||+++++||||++++ +.+.+.|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~   71 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQKRAQYDQFGHA   71 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhccHhHHHHHHhcCcc
Confidence            3699999999999999999999999999999999974 67889999999999999999999999998753

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=5.2e-19  Score=154.53  Aligned_cols=67  Identities=45%  Similarity=0.590  Sum_probs=63.9

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      .|||+||||+++||.++|++|||+++++||||+|+ ++.+.+.|+.|++||+||+||.+|..||.++.
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~   69 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGD   69 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCC
Confidence            69999999999999999999999999999999998 57888999999999999999999999999875

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1.7e-18  Score=151.58  Aligned_cols=70  Identities=39%  Similarity=0.624  Sum_probs=66.6

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|++|||+++++||||++++++.+.+.|+.|++||++|+||.+|+.||.++..
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~   73 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA   73 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence            4799999999999999999999999999999999988788999999999999999999999999998754

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.74  E-value=2.7e-18  Score=149.43  Aligned_cols=69  Identities=38%  Similarity=0.565  Sum_probs=64.7

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE-KAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      .|||+||||+++||..+|++|||+++++||||++++++ .|.+.|+.|++||++|+||.+|..||.++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~   72 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV   72 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence            69999999999999999999999999999999998664 7889999999999999999999999998753

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.74  E-value=3.9e-18  Score=147.73  Aligned_cols=67  Identities=45%  Similarity=0.668  Sum_probs=63.3

Q ss_pred             chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        28 d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      |||+||||+++|+.++||+||++++++||||+++ ++.+.+.|+.|++||++|+||.+|..||.++..
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~   67 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHA   67 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccc
Confidence            7999999999999999999999999999999997 567889999999999999999999999998754

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.73  E-value=1.7e-17  Score=130.57  Aligned_cols=130  Identities=21%  Similarity=0.228  Sum_probs=85.2

Q ss_pred             cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDEK-----AIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEV   99 (180)
Q Consensus        27 ~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~   99 (180)
                      +|||+||||+++  ++..+|+++|+++++++|||+.++.+.     +...|..||+||++|+||..|+.|+..+.+....
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~g~~~~   80 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLHGFDLA   80 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhcCCccc
Confidence            489999999996  678999999999999999999765432     5678999999999999999999999877643221


Q ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy17599        100 KIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINL  168 (180)
Q Consensus       100 ~~~~~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~  168 (180)
                      .......  ...=+++.++-+|.-.......          .....+..|..+...+..+....+...|
T Consensus        81 ~~~~~~~--d~efLme~me~rE~le~~~~~~----------d~~~~l~~l~~~~~~~~~~~~~~l~~~~  137 (171)
T PRK05014         81 HEQHTVR--DTAFLMEQMELREELEDIEQSK----------DPEAALESFIKRVKKMFKTRLQQMVEQL  137 (171)
T ss_pred             cccCCcC--CHHHHHHHHHHHHHHHhhcccc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111111  1234566666666533221100          1123355555555555555555555444

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.73  E-value=6.8e-18  Score=143.74  Aligned_cols=67  Identities=33%  Similarity=0.508  Sum_probs=63.2

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      .|||+||||++++|.++|++|||+++++||||++++ +.+.+.|..|++||++|+||.+|+.||.++.
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~   70 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ   70 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence            699999999999999999999999999999999874 6788999999999999999999999999863

>KOG0721|consensus

Probab=99.73  E-value=9e-18  Score=134.65  Aligned_cols=92  Identities=30%  Similarity=0.515  Sum_probs=76.6

Q ss_pred             HHHHHHHhchhhhhhh---cccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcC
Q psy17599          5 MCNIVWSFPAIPLSSI---MADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLL   81 (180)
Q Consensus         5 ~~~~~~~~~~~~~~~~---~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~   81 (180)
                      +..++|+++++++...   .......|||+||||+|++|..+||+|||+|++++||||+|......+.|..|++||..|+
T Consensus        74 ~lv~~W~v~~fL~y~i~~~~~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLT  153 (230)
T KOG0721|consen   74 FLVVGWAVIAFLIYKIMNSRRERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALT  153 (230)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhc
Confidence            4456677666554433   3455668999999999999999999999999999999999865566778999999999999


Q ss_pred             CHHHHHHHHHHHHHH
Q psy17599         82 DKSARAAYDSVIRRK   96 (180)
Q Consensus        82 dp~~R~~YD~~~~~~   96 (180)
                      |+..|..|..++...
T Consensus       154 D~~sreN~ekYG~PD  168 (230)
T KOG0721|consen  154 DKKSRENWEKYGNPD  168 (230)
T ss_pred             chhhHHHHHHhCCCC
Confidence            999999999987643

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.73  E-value=5.6e-18  Score=147.74  Aligned_cols=68  Identities=34%  Similarity=0.510  Sum_probs=63.9

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      .|||+||||+++||.++|++|||+++++||||+++ ++.+.+.|..|++||++|+||.+|..||.++..
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   70 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD   70 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence            59999999999999999999999999999999997 466788999999999999999999999998754

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.73  E-value=6.8e-18  Score=158.45  Aligned_cols=72  Identities=21%  Similarity=0.345  Sum_probs=66.6

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRK   96 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~   96 (180)
                      ....+||+||||+++||..+||+|||++|++||||++|++ .+...|+.|+.||+|||||.+|..||.+|..+
T Consensus       570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G  641 (1136)
T PTZ00341        570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDG  641 (1136)
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence            3468999999999999999999999999999999999874 67889999999999999999999999987654

>KOG0715|consensus

Probab=99.72  E-value=6.2e-18  Score=142.87  Aligned_cols=72  Identities=36%  Similarity=0.531  Sum_probs=66.9

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRK   96 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~   96 (180)
                      ....|||+||||+++|+..+||+||++|+++||||.|.+ +.+.+.|+.|..||+||+|+.+|..||..+...
T Consensus        40 ~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~  111 (288)
T KOG0715|consen   40 ISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ  111 (288)
T ss_pred             CCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence            344499999999999999999999999999999999986 589999999999999999999999999998765

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=6.5e-18  Score=147.24  Aligned_cols=68  Identities=43%  Similarity=0.634  Sum_probs=64.2

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      +|||+||||+++||.++|++||++++++||||+++ ++.+.+.|+.|++||++|+||.+|+.||.++..
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~   69 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA   69 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence            59999999999999999999999999999999997 477889999999999999999999999998753

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.72  E-value=1.1e-17  Score=109.01  Aligned_cols=58  Identities=48%  Similarity=0.703  Sum_probs=54.3

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHHcCCHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPD-DEKAIETFHLLSKAIEVLLDKS   84 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~-~~~a~~~f~~i~~Ay~iL~dp~   84 (180)
                      .|||+||||+++++..+|+++|+++++.+|||++++ .+.+...|..|+.||++|+||.
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~   59 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE   59 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence            489999999999999999999999999999999986 5778899999999999999984

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=1.1e-17  Score=146.10  Aligned_cols=68  Identities=35%  Similarity=0.569  Sum_probs=64.1

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      .|||+||||+++||.++|++|||+++++||||++++ +.+.+.|+.|++||+||+||.+|+.||.++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~   70 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETRARYDQFGEA   70 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence            699999999999999999999999999999999974 67889999999999999999999999998753

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.71  E-value=3.1e-17  Score=105.03  Aligned_cols=55  Identities=53%  Similarity=0.822  Sum_probs=51.8

Q ss_pred             chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCC
Q psy17599         28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLD   82 (180)
Q Consensus        28 d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~d   82 (180)
                      |||+||||+++++.++|+++|+++++.+|||++++.+.+...|..|+.||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999999999999999997546778999999999999987

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0719|consensus

Probab=99.71  E-value=2.1e-17  Score=133.88  Aligned_cols=100  Identities=39%  Similarity=0.568  Sum_probs=77.5

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNP--DDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEV-KIR  102 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~--~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~-~~~  102 (180)
                      ..|+|+||||..+|+..+|++||+++++.||||+++  +..++...|+.|+.||.||+|..+|+.||..+...... ...
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~d~~   92 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESGDID   92 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccchhh
Confidence            459999999999999999999999999999999995  33578899999999999999999999999987655221 111


Q ss_pred             hhhhHHHHHHHH----HHHHHHHHHHH
Q psy17599        103 NSKLDATRKKFK----EDLERREKEAE  125 (180)
Q Consensus       103 ~~~~~~~r~~~~----e~le~rE~~~~  125 (180)
                      ....+.++.-++    ++++.-++..+
T Consensus        93 ~~~~e~~~~iyk~VteedIeef~a~Y~  119 (264)
T KOG0719|consen   93 EDWLEFWRAIYKKVTEEDIEEFEANYQ  119 (264)
T ss_pred             hHHHHHHHHHHhhcccccHHHHHHHhc
Confidence            222334444444    56666665443

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.71  E-value=9.6e-17  Score=126.81  Aligned_cols=130  Identities=20%  Similarity=0.221  Sum_probs=86.3

Q ss_pred             CcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDEK-----AIETFHLLSKAIEVLLDKSARAAYDSVIRRKEE   98 (180)
Q Consensus        26 ~~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~   98 (180)
                      ..|||+|||||++  ++..+|+++|++++++||||++++.+.     +.+.+..||.||.+|+||.+|+.|+..+.+...
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~~~   84 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGVDV   84 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCCCC
Confidence            4799999999995  688999999999999999999875544     344578999999999999999999987764322


Q ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy17599         99 VKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINL  168 (180)
Q Consensus        99 ~~~~~~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~  168 (180)
                      ........  ...=+++.++-+|.-.......    .       ..+|+.|..+...+++.....+...|
T Consensus        85 ~~e~~~~~--d~~fLme~mE~rE~lee~~~~~----d-------~~~L~~l~~e~~~~~~~~~~~l~~~~  141 (176)
T PRK03578         85 QAENNTAM--PPAFLMQQMEWREAIEDARAAR----D-------VDALDALLAELRDERRERYAELGALL  141 (176)
T ss_pred             ccccCCCC--CHHHHHHHHHHHHHHHHhhccC----C-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111111  1224566666666533221100    0       23456666655555555555555544

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.71  E-value=6.3e-17  Score=126.76  Aligned_cols=126  Identities=16%  Similarity=0.190  Sum_probs=84.4

Q ss_pred             cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDEK---AIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKI  101 (180)
Q Consensus        27 ~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~~---a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~~~  101 (180)
                      .|||+||||+++  ++..+|+++|+++++++|||++++...   +...|..||+||.||+||.+|+.|+..+.+......
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~g~~~~~~   81 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQNINLNDE   81 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHccCCCCCCc
Confidence            599999999996  789999999999999999999865322   335688999999999999999999988753221111


Q ss_pred             Hh-hhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy17599        102 RN-SKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINL  168 (180)
Q Consensus       102 ~~-~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~  168 (180)
                      .. ...  ...=+++.++.+|.-.....              ..+|+.|..+...........+...|
T Consensus        82 ~~~~~~--d~~fLme~me~rE~le~~~~--------------~~~L~~l~~~~~~~~~~~~~~l~~~f  133 (166)
T PRK01356         82 KTRSLL--SPLELSIFWDEMERIENTIL--------------FSDLEKIKNKYELMYKNEIDSLKQAF  133 (166)
T ss_pred             cccccC--CHHHHHHHHHHHHHHHcCCC--------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00 111  12245556666655322200              12356666666555555555555555

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.66  E-value=6.4e-16  Score=121.77  Aligned_cols=96  Identities=21%  Similarity=0.241  Sum_probs=73.0

Q ss_pred             CCcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDEK-----AIETFHLLSKAIEVLLDKSARAAYDSVIRRKE   97 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~   97 (180)
                      ...|||++|||+++  ++..+|+++|+++++++|||++++.+.     +...|..||.||.+|+||.+|+.|+..+.+..
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~g~~   81 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALSGHE   81 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhcCCC
Confidence            46799999999997  668999999999999999999876543     56789999999999999999999999876432


Q ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy17599         98 EVKIRNSKLDATRKKFKEDLERREKE  123 (180)
Q Consensus        98 ~~~~~~~~~~~~r~~~~e~le~rE~~  123 (180)
                      .... ....  ...=+++.++-+|.-
T Consensus        82 ~~~~-~~~~--d~~fLme~me~rE~l  104 (173)
T PRK00294         82 VPLE-VTVH--DPEFLLQQMQLREEL  104 (173)
T ss_pred             CCcc-cCCC--CHHHHHHHHHHHHHH
Confidence            2111 1111  123466666666653

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=2.2e-16  Score=124.83  Aligned_cols=68  Identities=46%  Similarity=0.690  Sum_probs=64.6

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchH-HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEK-AIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~-a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      ..|||+||||+++|+..+|+++|++++++||||++++++. +.+.|..|++||.+|+||..|..||..+
T Consensus         5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            4799999999999999999999999999999999998775 8999999999999999999999999864

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.61  E-value=1.5e-15  Score=140.15  Aligned_cols=69  Identities=36%  Similarity=0.523  Sum_probs=64.6

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRK   96 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~   96 (180)
                      .|||+||||+++|+..+||++||+++++||||++++ +.+...|+.|+.||++|+||.+|..||.++...
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG   70 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDG   70 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence            599999999999999999999999999999999975 778889999999999999999999999987644

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PHA03102 Small T antigen; Reviewed

Probab=99.59  E-value=1.1e-15  Score=118.08  Aligned_cols=65  Identities=25%  Similarity=0.255  Sum_probs=59.9

Q ss_pred             cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~a--s~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..+|+||||+++|  |..+||+|||++++++|||++++    .+.|+.|+.||++|+|+..|..||.++..
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~   71 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEED   71 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCc
Confidence            4689999999999  99999999999999999999864    36999999999999999999999998754

>KOG0720|consensus

Probab=99.56  E-value=1.8e-14  Score=126.25  Aligned_cols=73  Identities=42%  Similarity=0.653  Sum_probs=68.6

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEV   99 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~   99 (180)
                      ..|+|.+|||+++++.++||+.||++|..+|||||. .|.|.+.|..|..||++|+|+.+|..||..+......
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~kene~  306 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKKENEL  306 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHH
Confidence            689999999999999999999999999999999997 6999999999999999999999999999988765544

>KOG1150|consensus

Probab=99.50  E-value=1.4e-12  Score=103.81  Aligned_cols=74  Identities=31%  Similarity=0.567  Sum_probs=65.7

Q ss_pred             ccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         22 ADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        22 ~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      +..-++|||+||.|.|..+.++|++.||++++..||||||++ +.|...|..+.+||.+|-|+.-|..-+....+
T Consensus        48 styfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~~y~~  122 (250)
T KOG1150|consen   48 STYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLDVYTA  122 (250)
T ss_pred             ccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            344678999999999999999999999999999999999998 77899999999999999999977766554443

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.49  E-value=2.7e-13  Score=106.91  Aligned_cols=128  Identities=19%  Similarity=0.256  Sum_probs=86.5

Q ss_pred             cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-
Q psy17599         27 LDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDE-----KAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEE-   98 (180)
Q Consensus        27 ~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~-   98 (180)
                      .|||++||||+.  .+...+++.|+.+...+|||+..+.+     .+.+....||+||.+|+||.+|+.|-..+.++.. 
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~~g~~~   81 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALNTGEQQ   81 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhccCCCC
Confidence            599999999986  89999999999999999999976543     2456789999999999999999999998873211 


Q ss_pred             -HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy17599         99 -VKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINL  168 (180)
Q Consensus        99 -~~~~~~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~  168 (180)
                       .+......   ..=+++.++-+|.-.......      .     ...++.|..+......+....+...|
T Consensus        82 ~~e~~~~~d---~~fLme~ME~rE~lee~~~~~------d-----~~~L~~l~~~v~~~~~~~~~~l~~~~  138 (173)
T PRK01773         82 NLEEKSTQD---MAFLMQQMEWREQLEEIEQQQ------D-----EDALTAFSKEIKQEQQAILTELSTAL  138 (173)
T ss_pred             CcccccCCC---HHHHHHHHHHHHHHHhhcccC------C-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             11111111   234566666666533221100      0     23466666666666666666665555

>KOG0722|consensus

Probab=99.48  E-value=6e-14  Score=115.28  Aligned_cols=71  Identities=28%  Similarity=0.501  Sum_probs=65.0

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ....|.|+||||+.+++..+|.+|||+|++++|||++++ +.+...|..|..||++|.|...|..||-.+..
T Consensus        30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyaldh  100 (329)
T KOG0722|consen   30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYALDH  100 (329)
T ss_pred             ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHhcC
Confidence            345799999999999999999999999999999999985 66679999999999999999999999987753

>KOG0624|consensus

Probab=99.42  E-value=2.1e-13  Score=116.85  Aligned_cols=71  Identities=38%  Similarity=0.492  Sum_probs=63.6

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE---KAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      .....|||.||||..+|+..+|.+|||+++.+||||...+..   .|...|.-|..|-+||+||.+|..||..-
T Consensus       390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGe  463 (504)
T KOG0624|consen  390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGE  463 (504)
T ss_pred             HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCC
Confidence            345689999999999999999999999999999999876542   47889999999999999999999999753

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.40  E-value=8.9e-13  Score=97.23  Aligned_cols=56  Identities=23%  Similarity=0.388  Sum_probs=49.0

Q ss_pred             ccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcC
Q psy17599         22 ADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLL   81 (180)
Q Consensus        22 ~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~   81 (180)
                      ..+...++|+||||++++|.++|+++||++++++|||++++    ...|..|++||++|.
T Consensus        60 ~~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs----~~~~~kIneAyevL~  115 (116)
T PTZ00100         60 NPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS----TYIASKVNEAKDLLL  115 (116)
T ss_pred             CCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHh
Confidence            34445799999999999999999999999999999998642    467899999999985

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.38  E-value=3e-12  Score=99.51  Aligned_cols=117  Identities=22%  Similarity=0.232  Sum_probs=75.4

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHHH
Q psy17599         38 DCSEQDIRSAYRKKALKCHPDKNPDDE-----KAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEVKIR-NSKLDATRK  111 (180)
Q Consensus        38 ~as~~eIkkayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~~~~-~~~~~~~r~  111 (180)
                      +.+..+|+++|++++.++|||+.++.+     .+...|..||+||.+|+||.+|+.|+..+.+....... ......   
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~g~~~~~e~~~~~d~~---   78 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLHGIDLASEQHSVRDTA---   78 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhcCCCCCcccCCCCCHH---
Confidence            357889999999999999999965432     25678999999999999999999999998743221111 111222   


Q ss_pred             HHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy17599        112 KFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINL  168 (180)
Q Consensus       112 ~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~  168 (180)
                      =+++.++-+|.-.......      .     ..+|+.|..+...+.......+...|
T Consensus        79 fLme~Me~rE~lee~~~~~------d-----~~~L~~l~~~~~~~~~~~~~~l~~~~  124 (157)
T TIGR00714        79 FLMEQLELREELDEIEQAK------D-----EARLESFIKRVKKMFQTRHQLLVEQL  124 (157)
T ss_pred             HHHHHHHHHHHHHHHHhCC------C-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444422111100      0     23566666666666666666666655

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.37  E-value=8.4e-13  Score=115.80  Aligned_cols=90  Identities=30%  Similarity=0.451  Sum_probs=75.1

Q ss_pred             HHHHHHHhchhhhhhhcc----cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHH
Q psy17599          5 MCNIVWSFPAIPLSSIMA----DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-----EKAIETFHLLSK   75 (180)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~----~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-----~~a~~~f~~i~~   75 (180)
                      +..++|.+.++++..+..    .....|||+||||+.+++..+||++||+|+.++||||.+.-     ....+.+..|++
T Consensus        72 f~ivgWl~i~~L~~~I~~~k~~~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~Itk  151 (610)
T COG5407          72 FTIVGWLVISYLISNIRTLKIEYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITK  151 (610)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHH
Confidence            445677777766655433    44567999999999999999999999999999999997651     356788999999


Q ss_pred             HHHHcCCHHHHHHHHHHHH
Q psy17599         76 AIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        76 Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ||..|+|...|..|-.++.
T Consensus       152 AY~~lTd~k~renyl~yGt  170 (610)
T COG5407         152 AYGLLTDKKRRENYLNYGT  170 (610)
T ss_pred             HHHhhhhHHHHHHHHhcCC
Confidence            9999999999999998854

>KOG0714|consensus

Probab=99.35  E-value=6.1e-13  Score=109.79  Aligned_cols=69  Identities=45%  Similarity=0.634  Sum_probs=62.7

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ..|||.||||+++|+..+|++||+++++.||||+++.+ ..+...|.+|.+||++|+||.+|..||.++.
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~   71 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE   71 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence            46999999999999999999999999999999998865 2344589999999999999999999999986

>KOG0550|consensus

Probab=99.34  E-value=1.1e-12  Score=114.37  Aligned_cols=72  Identities=35%  Similarity=0.518  Sum_probs=65.9

Q ss_pred             ccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         22 ADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        22 ~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      +..+..|||.||||+.+++..+|+++|+++++.||||++.++ .++...|..+.+||.||+||.+|..||..-
T Consensus       368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~  440 (486)
T KOG0550|consen  368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQ  440 (486)
T ss_pred             HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccccc
Confidence            344568999999999999999999999999999999999887 678889999999999999999999999753

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.33  E-value=1.7e-12  Score=108.73  Aligned_cols=58  Identities=31%  Similarity=0.366  Sum_probs=51.2

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---c----hHHHHHHHHHHHHHHHcCC
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPD---D----EKAIETFHLLSKAIEVLLD   82 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~---~----~~a~~~f~~i~~Ay~iL~d   82 (180)
                      .-.|+|+||||++++|.++||++||+++++||||++.+   +    +.+.+.|+.|+.||++|+.
T Consensus       198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            34699999999999999999999999999999999642   1    3578899999999999974

>PHA02624 large T antigen; Provisional

Probab=99.25  E-value=9.9e-12  Score=113.51  Aligned_cols=60  Identities=28%  Similarity=0.359  Sum_probs=56.1

Q ss_pred             CcchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHH
Q psy17599         26 DLDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAY   89 (180)
Q Consensus        26 ~~d~Y~iLgv~~~a--s~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~Y   89 (180)
                      ..++|++|||+++|  +..+||+|||+++++||||++++    .+.|+.|+.||++|+|+.++..|
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence            46999999999999  99999999999999999999753    47899999999999999999998

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=99.10  E-value=8.8e-11  Score=97.61  Aligned_cols=78  Identities=37%  Similarity=0.471  Sum_probs=67.4

Q ss_pred             hhhhhhcccCCCcchhhhcCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCchHHHHHHHHHHHHHHHcCCHHHHHHH
Q psy17599         15 IPLSSIMADIKDLDLYGLLELTI---DCSEQDIRSAYRKKALKCHPDKN--PDDEKAIETFHLLSKAIEVLLDKSARAAY   89 (180)
Q Consensus        15 ~~~~~~~~~~~~~d~Y~iLgv~~---~as~~eIkkayr~l~~~~HPDk~--~~~~~a~~~f~~i~~Ay~iL~dp~~R~~Y   89 (180)
                      .++......|...|+|.+|||+.   .+++.+|.+++++.+.+||||+.  +++-...+.|..|+.||+||+|+..|..|
T Consensus        31 ~~~~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qy  110 (379)
T COG5269          31 LYTREDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQY  110 (379)
T ss_pred             HHHhhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhc
Confidence            34556678899999999999986   58889999999999999999996  33445678999999999999999999999


Q ss_pred             HHH
Q psy17599         90 DSV   92 (180)
Q Consensus        90 D~~   92 (180)
                      |..
T Consensus       111 DS~  113 (379)
T COG5269         111 DSN  113 (379)
T ss_pred             ccc
Confidence            963

>KOG3192|consensus

Probab=98.67  E-value=1.3e-07  Score=72.72  Aligned_cols=129  Identities=19%  Similarity=0.271  Sum_probs=90.5

Q ss_pred             CCcchhhhcCCC--CCCCHHHHHHHHHHHHHHhCCCCCCC----c-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELT--IDCSEQDIRSAYRKKALKCHPDKNPD----D-EKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKE   97 (180)
Q Consensus        25 ~~~d~Y~iLgv~--~~as~~eIkkayr~l~~~~HPDk~~~----~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~   97 (180)
                      ...+||.++|..  +..+++.+..-|.-...++|||+...    + ..|.+....+|+||.+|.||-.|+.|-..+....
T Consensus         6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~g~e   85 (168)
T KOG3192|consen    6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLKGQE   85 (168)
T ss_pred             hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence            457999999864  45667777778999999999999421    1 2477889999999999999999999998877643


Q ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q psy17599         98 EVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINLWL  170 (180)
Q Consensus        98 ~~~~~~~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~~~  170 (180)
                      ....   .......-+++.|+-.|.--...-              ...+.+|+.+...++......+++.++.
T Consensus        86 ~~sn---e~stDpe~Lmevle~~E~IS~~~D--------------e~~l~~lk~q~q~ri~q~~~qlge~~es  141 (168)
T KOG3192|consen   86 QTSN---ELSTDPEFLMEVLEYHEAISEMDD--------------EEDLKQLKSQNQERIAQCKQQLGEAFES  141 (168)
T ss_pred             Cchh---hhccCHHHHHHHHHHHHHHHhccC--------------cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3322   122234456777776665332211              2346677777777777777777777653

>KOG1789|consensus

Probab=98.41  E-value=5.9e-07  Score=86.16  Aligned_cols=53  Identities=36%  Similarity=0.430  Sum_probs=45.5

Q ss_pred             CcchhhhcCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcC
Q psy17599         26 DLDLYGLLELTID----CSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLL   81 (180)
Q Consensus        26 ~~d~Y~iLgv~~~----as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~   81 (180)
                      .-+-|+||.|+-+    -....|+++|++++.+|||||||   +.-+.|..+++||+.|+
T Consensus      1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred             hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence            3478999999753    34578999999999999999996   45789999999999998

>KOG0723|consensus

Probab=98.27  E-value=2.1e-06  Score=62.11  Aligned_cols=52  Identities=21%  Similarity=0.261  Sum_probs=43.9

Q ss_pred             chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCH
Q psy17599         28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK   83 (180)
Q Consensus        28 d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp   83 (180)
                      .--.||||+|+++.+.||.++|+..+..|||+.++ |   -.-..||+|+++|...
T Consensus        57 EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-P---YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   57 EAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-P---YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-H---HHHHHHHHHHHHHhcc
Confidence            33459999999999999999999999999999865 4   3446799999998753

>KOG0568|consensus

Probab=98.23  E-value=9.7e-07  Score=72.33  Aligned_cols=59  Identities=22%  Similarity=0.425  Sum_probs=50.8

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHH-HcCC
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIE-VLLD   82 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~-iL~d   82 (180)
                      ...-+.+|.||||..+|+.++++.+|..++..+|||... +....+.|.+|.+||. ||+.
T Consensus        43 ke~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs-~~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   43 KEKIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGS-EEADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCC-ccccHHHHHHHHHHHHHHHHH
Confidence            334578999999999999999999999999999999875 3556789999999998 6653

>KOG0431|consensus

Probab=97.37  E-value=0.00022  Score=64.18  Aligned_cols=51  Identities=31%  Similarity=0.401  Sum_probs=38.0

Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-------HHHHHHHHHHHHHHHc
Q psy17599         30 YGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE-------KAIETFHLLSKAIEVL   80 (180)
Q Consensus        30 Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~-------~a~~~f~~i~~Ay~iL   80 (180)
                      |+=.++..=++...||++||+.++.+||||.++.+       -+.+.|..+++||+..
T Consensus       391 WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f  448 (453)
T KOG0431|consen  391 WQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF  448 (453)
T ss_pred             cccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence            34445556679999999999999999999976542       2456677777777643

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=97.03  E-value=0.0009  Score=52.70  Aligned_cols=58  Identities=29%  Similarity=0.406  Sum_probs=47.6

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--c-----hHHHHHHHHHHHHHHHc
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPD--D-----EKAIETFHLLSKAIEVL   80 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~--~-----~~a~~~f~~i~~Ay~iL   80 (180)
                      .....+.|.+||+++..+..+|+++|+.+....|||+-.+  .     ..+.+.++.|+.||..+
T Consensus       109 ~~~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         109 QLDREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             cccchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            3334799999999999999999999999999999998422  1     24677889999998753

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.87  E-value=0.00089  Score=52.72  Aligned_cols=67  Identities=22%  Similarity=0.277  Sum_probs=54.0

Q ss_pred             chhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         28 DLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEK-----AIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        28 d~Y~iLgv~~~a--s~~eIkkayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      |++..+|.++.+  ..+.++..|+.+...+|||+....+.     +...+..++.||.+|.||-.|+.|-..+.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~   75 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA   75 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence            456666766643  45568999999999999999765433     44679999999999999999999998776

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=95.54  E-value=0.036  Score=41.67  Aligned_cols=50  Identities=18%  Similarity=0.196  Sum_probs=33.2

Q ss_pred             chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcC
Q psy17599         28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLL   81 (180)
Q Consensus        28 d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~   81 (180)
                      .-..||||++..+.++|.+.|..|-...+|+++++    .-.-..|..|.+.|.
T Consensus        59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~  108 (127)
T PF03656_consen   59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLE  108 (127)
T ss_dssp             HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHH
Confidence            44589999999999999999999999999998863    222344555555543

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF13446 RPT: A repeated domain in UCH-protein

Probab=87.87  E-value=1.3  Score=28.57  Aligned_cols=27  Identities=26%  Similarity=0.357  Sum_probs=24.3

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKAL   53 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~   53 (180)
                      .+-|.+|||+++.+.+.|-.+|.....
T Consensus         5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    5 EEAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            356999999999999999999999777

>KOG1029|consensus

Probab=86.78  E-value=3.9  Score=39.50  Aligned_cols=15  Identities=40%  Similarity=0.523  Sum_probs=7.9

Q ss_pred             HHHHHHHHHhccccc
Q psy17599        143 QQEIDRLRKEGKYPL  157 (180)
Q Consensus       143 ~~ei~rlr~eg~r~~  157 (180)
                      +.+|++-|++.+++.
T Consensus       380 QReiE~qrEEerkke  394 (1118)
T KOG1029|consen  380 QREIERQREEERKKE  394 (1118)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            445555565555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	180
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		1e-09
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		2e-09
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		4e-09
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		5e-09
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		9e-09
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-08
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		2e-08
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-08
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-08
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		4e-08
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		6e-08
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		9e-08
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		1e-07
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		2e-07
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		7e-06
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		1e-05
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		2e-05
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		3e-04
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		3e-04

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
          +K+   Y +L +  D S+ +++ AYRK ALK HPDKNPD     E F  +S+A EVL D+
Sbjct: 5  VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD---GAEQFKQISQAYEVLSDE 61
Query: 84 SARAAYD 90
            R  YD
Sbjct: 62 KKRQIYD 68

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 18 SSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKA 76
          SS MA+      Y +L +    S +DI+ AYRK AL+ HPDKNPD+ E+A + F L+S+A
Sbjct: 5  SSGMAN-----YYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEA 59
Query: 77 IEVLLDKSARAAYD 90
           EVL D   R+ YD
Sbjct: 60 YEVLSDSKKRSLYD 73

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y LL      S + I + ++ +AL+CHPDK+P++ KA+ETF  L KA E+L ++ +RA
Sbjct: 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 88 AYD 90
           YD
Sbjct: 81 RYD 83

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
          D + Y LL ++   S ++IR A++K ALK HPDKNP++  A   F  +++A EVL D+  
Sbjct: 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL 79
Query: 86 RAAYD 90
          R  YD
Sbjct: 80 RKKYD 84

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 29 LYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAA 88
          LY +L L  + +  DI+ +YRK ALK HPDKNPD+ +A + F  ++ A  +L D + R  
Sbjct: 19 LYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78
Query: 89 YD 90
          YD
Sbjct: 79 YD 80

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++    E++IR AY++ A+K HPD+N  D++A   F  + +A EVL D   RA
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 88 AYD 90
          AYD
Sbjct: 64 AYD 66

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 30 YGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAA 88
          Y +L++    S  DI+ AYR+KAL+ HPDKNPD+ E A + F  +++A EVL DK  R  
Sbjct: 5  YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64
Query: 89 YDSVIR 94
          YD   R
Sbjct: 65 YDRYGR 70

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++    E++IR AY++ A+K HPD+N  D++A   F  + +A EVL D   RA
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 88 AYD 90
          AYD
Sbjct: 64 AYD 66

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++    E++IR AY++ A+K HPD+N  D++A   F  + +A EVL D   RA
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 88 AYD 90
          AYD
Sbjct: 64 AYD 66

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          + Y LL ++   S ++IR A++K ALK HPDKNP++  A   F  +++A EVL D+  R 
Sbjct: 3  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 88 AYD 90
           YD
Sbjct: 63 KYD 65

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
          +K+   Y +L +  + ++++++ AYRK ALK HPDKNP++    E F  +S+A EVL D 
Sbjct: 3  VKETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEG---EKFKQISQAYEVLSDA 59
Query: 84 SARAAYD 90
            R  YD
Sbjct: 60 KKRELYD 66

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  + S+++I+ AY + A K HPD N DD KA E F  L++A EVL D+  R 
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 88 AYDS 91
           YD+
Sbjct: 68 QYDA 71

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 22 ADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLL 81
          A +K+  LY LL ++   +EQ+++  YRK ALK HPDK   D    E F  +S+A E+L 
Sbjct: 3  AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILN 59
Query: 82 DKSARAAYD 90
          D   R  YD
Sbjct: 60 DPQKREIYD 68

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSA 85
          +D Y +L++    S + I+ AYRK ALK HPDKNP++ E+A   F  +++A EVL D   
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68
Query: 86 RAAYD 90
          R  YD
Sbjct: 69 RDIYD 73

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
          D D Y +L ++   S+ DI+ AY+K A + HPDKN  D  A + F  +SKA E+L ++  
Sbjct: 16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKN-KDPGAEDRFIQISKAYEILSNEEK 74
Query: 86 RAAYD 90
          R  YD
Sbjct: 75 RTNYD 79

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++   S++D++ AYR+ ALK HPDKN     A E F  +  A  VL +   R 
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRK 66
Query: 88 AYD 90
           YD
Sbjct: 67 QYD 69

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y  L L    S+++I+ AYR++AL+ HPDKN  +  A E F  +++A +VL D   R 
Sbjct: 4  DYYQTLGLARGASDEEIKRAYRRQALRYHPDKN-KEPGAEEKFKEIAEAYDVLSDPRKRE 62
Query: 88 AYD 90
           +D
Sbjct: 63 IFD 65

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 29  LYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAA 88
           LY LL +    ++  I++AY ++    HPD+N    +A E F  +S+A  VL   + R  
Sbjct: 19  LYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRK 78
Query: 89  YDSVIRRKEEVKIRNSK 105
           YD  +   E+++   S 
Sbjct: 79  YDRGLLSDEDLRGPGSG 95

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 30 YGLLELTIDCSEQDIRSAYRKKALKCHPDKN--PDDEKAIETFHLLSKAIEVLLDKSARA 87
          Y +L +    SE+ I+ A+ K A+K HPDKN  PD E     F  +++A E L D + R 
Sbjct: 10 YDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAE---AKFREIAEAYETLSDANRRK 66
Query: 88 AYDSV 92
           YD++
Sbjct: 67 EYDTL 71

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	180
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	8e-20
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	3e-19
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	3e-19
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	2e-18
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	5e-18
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	6e-18
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	2e-17
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	6e-17
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	9e-17
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	1e-16
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	3e-16
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	5e-16
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	6e-16
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	1e-15
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	2e-15
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	1e-14
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	2e-14
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	3e-14
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	6e-14
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	9e-14
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	1e-13
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-13
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	2e-13
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	4e-13
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	8e-11
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	3e-09
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	5e-09
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-08
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	8e-08
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	2e-06
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-05
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2guz_A	71	Mitochondrial import inner membrane translocase su	5e-05
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	1e-04
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	8e-04

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 78.8 bits (195), Expect = 8e-20
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++    E++IR AY++ A+K HPD+N  D++A   F  + +A EVL D   RA
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 88 AYD 90
          AYD
Sbjct: 64 AYD 66

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 77.4 bits (191), Expect = 3e-19
 Identities = 27/63 (42%), Positives = 39/63 (61%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
           LY +L L  + +  DI+ +YRK ALK HPDKNPD+ +A + F  ++ A  +L D + R 
Sbjct: 18 SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN 77

Query: 88 AYD 90
           YD
Sbjct: 78 IYD 80

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 77.5 bits (191), Expect = 3e-19
 Identities = 28/63 (44%), Positives = 42/63 (66%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y LL      S + I + ++ +AL+CHPDK+P++ KA+ETF  L KA E+L ++ +RA
Sbjct: 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80

Query: 88 AYD 90
           YD
Sbjct: 81 RYD 83

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 74.8 bits (184), Expect = 2e-18
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
           LY LL +    ++  I++AY ++    HPD+N    +A E F  +S+A  VL   + R 
Sbjct: 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRR 77

Query: 88 AYD 90
           YD
Sbjct: 78 KYD 80

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 73.9 bits (182), Expect = 5e-18
 Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSAR 86
            Y +L++    S  DI+ AYR+KAL+ HPDKNPD+ E A + F  +++A EVL DK  R
Sbjct: 3  SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62

Query: 87 AAYD 90
            YD
Sbjct: 63 EIYD 66

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 76.8 bits (189), Expect = 6e-18
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          + Y LL ++   S ++IR A++K ALK HPDKNP++  A   F  +++A EVL D+  R 
Sbjct: 3  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62

Query: 88 AYD 90
           YD
Sbjct: 63 KYD 65

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 72.4 bits (178), Expect = 2e-17
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 18 SSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
          S+ M   K+  LY LL ++   +EQ+++  YRK ALK HPDK   D    E F  +S+A 
Sbjct: 1  SNAMV--KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAF 55

Query: 78 EVLLDKSARAAYD 90
          E+L D   R  YD
Sbjct: 56 EILNDPQKREIYD 68

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 72.9 bits (179), Expect = 6e-17
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD------EKAIETFHLLSKAIEVLL 81
          D Y +L      +  D++  Y+K  L  HPDK   D      E+ ++ F  + +A ++L 
Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 82 DKSARAAYDS 91
          ++  +  YD 
Sbjct: 71 NEETKREYDL 80

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 70.4 bits (173), Expect = 9e-17
 Identities = 28/63 (44%), Positives = 39/63 (61%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +  + S+++I+ AY + A K HPD N DD KA E F  L++A EVL D+  R 
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67

Query: 88 AYD 90
           YD
Sbjct: 68 QYD 70

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 70.4 bits (173), Expect = 1e-16
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSAR 86
          + Y +L +    S +DI+ AYRK AL+ HPDKNPD+ E+A + F L+S+A EVL D   R
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69

Query: 87 AAYD 90
          + YD
Sbjct: 70 SLYD 73

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 69.2 bits (170), Expect = 3e-16
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSAR 86
          D Y +L++    S + I+ AYRK ALK HPDKNP++ E+A   F  +++A EVL D   R
Sbjct: 10 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69

Query: 87 AAYD 90
            YD
Sbjct: 70 DIYD 73

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 68.4 bits (168), Expect = 5e-16
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y  L L    S+++I+ AYR++AL+ HPDKN +   A E F  +++A +VL D   R 
Sbjct: 4  DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG-AEEKFKEIAEAYDVLSDPRKRE 62

Query: 88 AYD 90
           +D
Sbjct: 63 IFD 65

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 68.5 bits (168), Expect = 6e-16
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
            Y +L +    SE+ I+ A+ K A+K HPDKN   + A   F  +++A E L D + R 
Sbjct: 8  SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPD-AEAKFREIAEAYETLSDANRRK 66

Query: 88 AYD 90
           YD
Sbjct: 67 EYD 69

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 66.9 bits (164), Expect = 1e-15
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 18 SSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
          S+ M   K+   Y +L +  D S+ +++ AYRK ALK HPDKNPD     E F  +S+A 
Sbjct: 1  SNAMV--KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGA---EQFKQISQAY 55

Query: 78 EVLLDKSARAAYD 90
          EVL D+  R  YD
Sbjct: 56 EVLSDEKKRQIYD 68

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 72.1 bits (176), Expect = 2e-15
 Identities = 29/74 (39%), Positives = 43/74 (58%)

Query: 17 LSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKA 76
           S  +    D + Y LL ++   S ++IR A++K ALK HPDKNP++  A   F  +++A
Sbjct: 11 SSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRA 70

Query: 77 IEVLLDKSARAAYD 90
           EVL D+  R  YD
Sbjct: 71 YEVLKDEDLRKKYD 84

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 64.6 bits (158), Expect = 1e-14
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++   S++D++ AYR+ ALK HPDKN     A E F  +  A  VL +   R 
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPG-ATEAFKAIGTAYAVLSNPEKRK 66

Query: 88 AYD 90
           YD
Sbjct: 67 QYD 69

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 64.3 bits (157), Expect = 2e-14
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++   S+ DI+ AY+K A + HPDKN D   A + F  +SKA E+L ++  R 
Sbjct: 18 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPG-AEDRFIQISKAYEILSNEEKRT 76

Query: 88 AYD 90
           YD
Sbjct: 77 NYD 79

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score = 68.0 bits (167), Expect = 3e-14
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L +      + I++AYR+ A K HPD + +++ A   F  L++A EVL D+  RA
Sbjct: 29 DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEND-AEAKFKDLAEAWEVLKDEQRRA 87

Query: 88 AYD 90
           YD
Sbjct: 88 EYD 90

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 63.7 bits (155), Expect = 6e-14
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 28 DLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
           L  LL L      +   +R AY KK  + HPDK  D+EK       ++   + + D   
Sbjct: 9  QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEK----MKKMNTLYKKMEDGVK 64

Query: 86 RAAYD 90
           A   
Sbjct: 65 YAHQP 69

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 62.8 bits (153), Expect = 9e-14
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 21 MADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD------EKAIETFHLLS 74
          +      D Y +L      +  D++  Y+K  L  HPDK   D      E+ ++ F  + 
Sbjct: 10 LEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEID 69

Query: 75 KAIEVLLDKSARAAYD 90
          +A ++L ++  +  YD
Sbjct: 70 QAWKILGNEETKKKYD 85

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 62.4 bits (152), Expect = 1e-13
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSAR 86
          ++  ++E      E + +   R+  LK HPDKNP++ + A E F  L   I  L     +
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 87 AAYD 90
          A  D
Sbjct: 74 AFLD 77

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 62.4 bits (152), Expect = 2e-13
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 28 DLYGLLELTID-CSEQDIRSAYRKKALKCHPDKNPDDEK---AIETFHLLSKAIEVLLDK 83
          + Y +LE+  +   +Q +  AYR  A K HPD+  + E+   A E F +++ A E L D 
Sbjct: 16 NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD 75

Query: 84 SARAAYD 90
           A+  YD
Sbjct: 76 EAKTNYD 82

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 61.7 bits (150), Expect = 2e-13
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D + +L +    S  ++  AYRK A+  HPDK      + + F  +  A   LL      
Sbjct: 28 DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG-SEDAFKAVVNARTALLKNIKSG 86

Query: 88 AYD 90
             
Sbjct: 87 PSS 89

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 63.0 bits (153), Expect = 4e-13
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 28 DLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSA 85
           L  LL L      +   +R AY KK  + HPDK  D+EK       ++   + + D   
Sbjct: 12 QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEK----MKKMNTLYKKMEDGVK 67

Query: 86 RAAYD 90
           A   
Sbjct: 68 YAHQP 72

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 58.5 bits (142), Expect = 8e-11
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 25  KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE---KAIETFHLLSKAIEVLL 81
           +  D Y +L +  +  +Q+I  AYRK AL+ HPD   ++E   KA + F  ++ A EVL 
Sbjct: 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLS 439

Query: 82  DKSARAAYDS 91
           D   R  +D 
Sbjct: 440 DPEMRKKFDD 449

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 50.3 bits (120), Expect = 3e-09
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 20 IMADIKDLDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAI 77
          +++      L  LL+L          ++ AY++++L  HPDK             L+   
Sbjct: 4  VLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHAL----MQELNSLW 59

Query: 78 EVLLDKSARAAYD 90
               +      +
Sbjct: 60 GTFKTEVYNLRMN 72

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 50.7 bits (121), Expect = 2e-08
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 13/133 (9%)

Query: 27  LDLYGLLEL--TIDCSEQDIRSAYRKKALKCHPDKNPDD-----EKAIETFHLLSKAIEV 79
           +D + L  L        Q +   ++    + HPDK           A++    +++A + 
Sbjct: 1   MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60

Query: 80  LLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEE 139
           L     RA Y   +   +    +++  D       E LE RE+  E E+ K    +++  
Sbjct: 61  LRHPLMRAEYLLSLHGFDLASEQHTVRDT--AFLMEQLELREELDEIEQAK----DEARL 114

Query: 140 EILQQEIDRLRKE 152
           E   + + ++   
Sbjct: 115 ESFIKRVKKMFDT 127

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 49.1 bits (116), Expect = 8e-08
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 30  YGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEK---AIETFHLLSKAIEVLLDKSAR 86
           +  + +    + + ++  YRK  L  HPDK         A   F  L+ A     ++  +
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179

Query: 87  AAY 89
             Y
Sbjct: 180 PLY 182

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 18/120 (15%), Positives = 46/120 (38%), Gaps = 17/120 (14%)

Query: 38  DCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR-- 95
              +  +R  YR+   + HPD         E    L++A   L D   R+ Y   + R  
Sbjct: 29  TIDQSRLRKEYRQLQAQHHPDMAQQGS---EQSSTLNQAYHTLKDPLRRSQYMLKLLRNI 85

Query: 96  ---KEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKE 152
              +E+     +  D       + L+  ++ ++ +       +++  ++L+++     ++
Sbjct: 86  DLTQEQTSNEVTTSDPQ--LLLKVLDIHDELSQMD-------DEAGVKLLEKQNKERIQD 136

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 16/135 (11%)

Query: 25  KDLDLYGLLEL--TIDCSEQDIRSAYRKKALKCHPDKNPDD-----EKAIETFHLLSKAI 77
              D + L++   +       ++  Y++     HPD          + + +   L++ A 
Sbjct: 41  PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAY 100

Query: 78  EVLLDKSARAAYDSVIRRKEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKS 137
           + LL   +R  Y   +   E  +  + ++D       E +E  EK AE E       +++
Sbjct: 101 KTLLAPLSRGLYLLKLHGIEIPERTDYEMDRQF--LIEIMEINEKLAEAE-------SEA 151

Query: 138 EEEILQQEIDRLRKE 152
             + ++  +   +KE
Sbjct: 152 AMKEIESIVKAKQKE 166

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 41.7 bits (97), Expect = 3e-05
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 92  VIRR-KEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGY--------KVNKSEEEIL 142
            IR+ +EE + R  +LDA  K  +++   + K+   E  +            N+  ++  
Sbjct: 86  SIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAF 145

Query: 143 QQEID 147
            Q+ D
Sbjct: 146 YQQPD 150

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 5e-05
 Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 32/149 (21%)

Query: 24  IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDK 83
           + + D   + ++         +S   K+ +  H   + D          L      LL K
Sbjct: 30  VDNFDCKDVQDMP--------KSILSKEEID-HIIMSKDAVSGT---LRL---FWTLLSK 74

Query: 84  SARAAY---DSVIRR-----KEEVKIRNSKLDATRKKFKEDLERREKEAENERYKGYKVN 135
                    + V+R         +K    +     + + E  +R     +N+ +  Y V+
Sbjct: 75  QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN--DNQVFAKYNVS 132

Query: 136 KSEEEILQQEIDRLRKEGKYPLKPVLYVF 164
           +       Q   +LR+     L+P   V 
Sbjct: 133 R------LQPYLKLRQ-ALLELRPAKNVL 154

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 38.9 bits (91), Expect = 5e-05
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 40 SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSAR 86
          +++ ++  +RK  L  HPDK      A +    +++A + L  +   
Sbjct: 28 TKKKLKEVHRKIMLANHPDKGGSPFLATK----INEAKDFLEKRGIS 70

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 3/54 (5%)

Query: 33 LELTIDCSEQDIRSAYRKKALKCHPDKNPDDEK---AIETFHLLSKAIEVLLDK 83
          + +    + + ++  YRK  L  HP K         A   F  L+ A     ++
Sbjct: 39 VGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFENQ 92

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 36.5 bits (84), Expect = 8e-04
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 33 LELTIDCSEQDIRSAYRKKALKCHPDKNPDD-------EKAIETFHLLSKA 76
          + L        +R +Y++  L  HPDK             A + F LL +A
Sbjct: 46 VPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEA 96

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	180
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.87
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.86
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.86
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.86
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.86
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.86
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.86
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.85
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.85
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.85
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.85
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.85
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.84
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.84
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.83
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.82
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.82
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.82
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.81
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.79
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.79
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.77
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.72
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.72
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.72
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.72
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.7
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.7
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.69
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.69
2guz_A	71	Mitochondrial import inner membrane translocase su	99.65
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.62
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.09
2guz_B	65	Mitochondrial import inner membrane translocase su	98.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	86.34

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=8.7e-23  Score=139.99  Aligned_cols=71  Identities=39%  Similarity=0.536  Sum_probs=66.5

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      .....|||+||||+++++..+|+++|++++++||||++++++.+.+.|..|++||++|+||.+|..||.++
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g   73 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYG   73 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence            34568999999999999999999999999999999999877888999999999999999999999999875

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=4.5e-22  Score=142.28  Aligned_cols=73  Identities=29%  Similarity=0.466  Sum_probs=68.1

Q ss_pred             ccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         22 ADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        22 ~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ..+...|||+||||+++++.++|+++|++++++||||++++++.+.+.|..|++||+||+||.+|..||..+.
T Consensus        12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   84 (99)
T 2yua_A           12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL   84 (99)
T ss_dssp             CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred             CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            3566789999999999999999999999999999999998778899999999999999999999999998654

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=5.7e-22  Score=135.64  Aligned_cols=69  Identities=36%  Similarity=0.536  Sum_probs=64.8

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      ....|||+||||+++++..+|+++|+++++.||||+++. +.+.+.|..|++||++|+||.+|..||.++
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~   72 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFG   72 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence            456899999999999999999999999999999999974 788899999999999999999999999875

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=6.9e-22  Score=144.30  Aligned_cols=73  Identities=40%  Similarity=0.623  Sum_probs=68.3

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRK   96 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~   96 (180)
                      ....|||+||||+++++..+|+++|++++++||||++++++.+.+.|+.|++||++|+||.+|..||.++...
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~   89 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ   89 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence            4568999999999999999999999999999999999877888999999999999999999999999998653

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.86  E-value=6.2e-22  Score=135.17  Aligned_cols=68  Identities=37%  Similarity=0.580  Sum_probs=63.8

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      +.|||+||||++++|.++|+++|+++++.||||++++ +.+.+.|..|++||++|+||.+|..||.++.
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   69 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGE   69 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCG
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            4699999999999999999999999999999999974 6778999999999999999999999998764

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.86  E-value=2e-21  Score=141.24  Aligned_cols=77  Identities=36%  Similarity=0.547  Sum_probs=70.6

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEV   99 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~   99 (180)
                      .....|||+||||+++++..+|+++|++++++||||++++++.+.+.|+.|++||++|+||.+|..||.++......
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~~   89 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYV   89 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccccc
Confidence            34568999999999999999999999999999999999887889999999999999999999999999988765543

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.85  E-value=5e-22  Score=140.34  Aligned_cols=74  Identities=24%  Similarity=0.430  Sum_probs=66.8

Q ss_pred             cccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         21 MADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD------EKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        21 ~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ...+...|||+||||+++++..+|+++|++++++||||+++.+      +.+.+.|..|++||++|+||.+|..||..+.
T Consensus        10 ~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           10 LEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             CSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            3456678999999999999999999999999999999998743      5678999999999999999999999998764

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.85  E-value=1.4e-21  Score=132.15  Aligned_cols=67  Identities=45%  Similarity=0.695  Sum_probs=61.7

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ...|||+||||+++++..+|+++|++++++||||++++.   .+.|..|+.||++|+||.+|..||.++.
T Consensus         6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            457999999999999999999999999999999999754   5789999999999999999999998763

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=1.3e-21  Score=137.05  Aligned_cols=71  Identities=32%  Similarity=0.478  Sum_probs=66.3

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ....|||+||||+++++.++|+++|++++++||||+++ ++.+.+.|..|++||++|+||.+|..||.++..
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~   74 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHS   74 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence            45679999999999999999999999999999999998 578899999999999999999999999998754

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=1.1e-21  Score=135.44  Aligned_cols=69  Identities=42%  Similarity=0.636  Sum_probs=64.1

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      ...|||+||||+++++..+|+++|++++++||||++++. +.+.+.|..|+.||++|+||.+|..||.++
T Consensus         7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g   76 (82)
T 2ej7_A            7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYG   76 (82)
T ss_dssp             SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTC
T ss_pred             CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence            457999999999999999999999999999999999865 367789999999999999999999999875

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.85  E-value=1.9e-21  Score=136.09  Aligned_cols=70  Identities=39%  Similarity=0.550  Sum_probs=65.1

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ....|||+||||+++++..+|+++|++++++||||++++ +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus        14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   83 (88)
T 2cug_A           14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGS   83 (88)
T ss_dssp             SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence            346899999999999999999999999999999999975 6788999999999999999999999999863

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.84  E-value=2e-21  Score=151.74  Aligned_cols=129  Identities=20%  Similarity=0.238  Sum_probs=90.3

Q ss_pred             cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEK-----AIETFHLLSKAIEVLLDKSARAAYDSVIRRKEEV   99 (180)
Q Consensus        27 ~d~Y~iLgv~~~a--s~~eIkkayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~~~   99 (180)
                      +|||+||||++++  |..+|+++|++++++||||++++.+.     +.+.|..|+.||+||+||.+|+.||..+.+....
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~~~   80 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLA   80 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCTT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCcc
Confidence            4899999999999  99999999999999999999986543     5679999999999999999999999987633221


Q ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q psy17599        100 KIRNSKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINL  168 (180)
Q Consensus       100 ~~~~~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~  168 (180)
                      .......+.  .-+++.++-+|.-........           ...|+.|..+...+++.....+...|
T Consensus        81 ~e~~~~~d~--~fLme~me~rE~lee~~~~~d-----------~~~l~~l~~~~~~~~~~~~~~l~~~~  136 (171)
T 1fpo_A           81 SEQHTVRDT--AFLMEQLELREELDEIEQAKD-----------EARLESFIKRVKKMFDTRHQLMVEQL  136 (171)
T ss_dssp             CSSSCCSCH--HHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCH--HHHHHHHHHHHHHHHhhccCC-----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111222  356667777765443211100           12466666666666666666665555

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.84  E-value=7.3e-21  Score=136.16  Aligned_cols=71  Identities=44%  Similarity=0.650  Sum_probs=64.4

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKE   97 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~   97 (180)
                      .|||+||||+++++.++|+++|++++++||||++++. +.+.+.|..|++||++|+||.+|..||.++....
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~   73 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL   73 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            5899999999999999999999999999999999865 4578899999999999999999999999886443

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=5e-21  Score=134.91  Aligned_cols=70  Identities=44%  Similarity=0.656  Sum_probs=64.6

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ...|||+||||+++++..+|+++|++++++||||+++++ +.+.+.|..|++||++|+||.+|..||..+.
T Consensus         7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (92)
T 2dmx_A            7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC   77 (92)
T ss_dssp             CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred             CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence            457999999999999999999999999999999999865 4678899999999999999999999998753

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.83  E-value=1.2e-20  Score=133.16  Aligned_cols=70  Identities=40%  Similarity=0.618  Sum_probs=64.1

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKE   97 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~   97 (180)
                      ...|||+||||+++++..+|+++|++++++||||+++++   .+.|+.|++||++|+||.+|..||.++....
T Consensus         6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   75 (92)
T 2o37_A            6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA   75 (92)
T ss_dssp             SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred             cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence            467999999999999999999999999999999999765   4699999999999999999999999876543

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.82  E-value=1.2e-20  Score=136.92  Aligned_cols=71  Identities=31%  Similarity=0.445  Sum_probs=65.6

Q ss_pred             CCcchhhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDC-SEQDIRSAYRKKALKCHPDKNPD---DEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~a-s~~eIkkayr~l~~~~HPDk~~~---~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ...|||+||||++++ +..+|+++|+++++.+|||++++   .+.+.+.|..|++||++|+||.+|..||.++..
T Consensus        13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~   87 (109)
T 2qsa_A           13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH   87 (109)
T ss_dssp             TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence            467999999999999 99999999999999999999975   356789999999999999999999999998853

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.82  E-value=8.4e-21  Score=152.33  Aligned_cols=78  Identities=17%  Similarity=0.220  Sum_probs=66.0

Q ss_pred             hhhhcccCCCcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHcCCHHHHHHH
Q psy17599         17 LSSIMADIKDLDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDE-----KAIETFHLLSKAIEVLLDKSARAAY   89 (180)
Q Consensus        17 ~~~~~~~~~~~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~iL~dp~~R~~Y   89 (180)
                      |..+.......|||+||||+++  ++..+|+++||+++++||||++++++     .+.+.|..|++||+||+||.+|+.|
T Consensus        33 c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Y  112 (207)
T 3bvo_A           33 CRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLY  112 (207)
T ss_dssp             TCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             ccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence            3334444456899999999986  78999999999999999999997643     2567899999999999999999999


Q ss_pred             HHHHH
Q psy17599         90 DSVIR   94 (180)
Q Consensus        90 D~~~~   94 (180)
                      |..+.
T Consensus       113 d~~l~  117 (207)
T 3bvo_A          113 LLKLH  117 (207)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            98764

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.82  E-value=2.6e-20  Score=142.93  Aligned_cols=77  Identities=22%  Similarity=0.416  Sum_probs=68.4

Q ss_pred             cccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         21 MADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE------KAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        21 ~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~------~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      .+.....|||+||||+++++.++|+++|+++++++|||++++++      .+.+.|..|++||++|+||.+|+.||..+.
T Consensus         4 ~~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            4 VEQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             cccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            34556789999999999999999999999999999999987653      367899999999999999999999999886


Q ss_pred             HHH
Q psy17599         95 RKE   97 (180)
Q Consensus        95 ~~~   97 (180)
                      ...
T Consensus        84 ~~~   86 (155)
T 2l6l_A           84 EDD   86 (155)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            543

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.81  E-value=2.1e-21  Score=139.69  Aligned_cols=70  Identities=39%  Similarity=0.618  Sum_probs=65.6

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||++++|.++|+++|++++++||||++++++.+.+.|+.|++||++|+||.+|..||.++..
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~   71 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHA   71 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTT
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhh
Confidence            4699999999999999999999999999999999987677889999999999999999999999998753

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.79  E-value=9.1e-20  Score=144.42  Aligned_cols=69  Identities=39%  Similarity=0.632  Sum_probs=65.7

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      .|||+||||+++|+..+||+|||+++++||||++++++.+.+.|..|++||++|+||.+|..||.++..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~   70 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK   70 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccc
Confidence            489999999999999999999999999999999987888999999999999999999999999998754

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.79  E-value=6.3e-20  Score=144.43  Aligned_cols=130  Identities=17%  Similarity=0.220  Sum_probs=88.5

Q ss_pred             cCCCcchhhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-H
Q psy17599         23 DIKDLDLYGLL------ELTI-DCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVI-R   94 (180)
Q Consensus        23 ~~~~~d~Y~iL------gv~~-~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~-~   94 (180)
                      .....|||+||      |+++ ++|..+|+++||+++++||||++++   +.+.|..|++||+||+||.+|..||..+ .
T Consensus         7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~   83 (181)
T 3uo3_A            7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLLR   83 (181)
T ss_dssp             CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHHh
Confidence            34457999999      4665 8999999999999999999999975   5688999999999999999999999988 3


Q ss_pred             HHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q psy17599         95 RKEEVKIRN--SKLDATRKKFKEDLERREKEAENERYKGYKVNKSEEEILQQEIDRLRKEGKYPLKPVLYVFRINLW  169 (180)
Q Consensus        95 ~~~~~~~~~--~~~~~~r~~~~e~le~rE~~~~~~~~~~~~~~~~~~~~~~~ei~rlr~eg~r~~~e~~~~~~~~~~  169 (180)
                      +........  ........-+++.++-+|.-.....              ..+++.|..+...++++....+...|.
T Consensus        84 g~~~~~e~~~~~~~~~d~~fLme~me~rE~leea~~--------------~~~l~~l~~~~~~~~~~~~~~l~~~~~  146 (181)
T 3uo3_A           84 NIDLTQEQTSNEVTTSDPQLLLKVLDIHDELSQMDD--------------EAGVKLLEKQNKERIQDIEAQLGQCYN  146 (181)
T ss_dssp             CCCTTSHHHHHHHHHTCHHHHHHHHHHHHHHHHCCS--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccccccccCCHHHHHHHHHHHHHHHhccC--------------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            221111000  0001112356777777776544311              123555555555555555555555554

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=2.1e-19  Score=126.33  Aligned_cols=62  Identities=26%  Similarity=0.385  Sum_probs=57.4

Q ss_pred             CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA   87 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~   87 (180)
                      ...|||+||||+++++..+||++|++++++||||++++ +.+.+.|+.|++||++|+||.+|.
T Consensus        25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~   86 (90)
T 2ys8_A           25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSG   86 (90)
T ss_dssp             TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCccccc
Confidence            35799999999999999999999999999999999974 677889999999999999998764

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.72  E-value=7.2e-19  Score=138.21  Aligned_cols=73  Identities=18%  Similarity=0.213  Sum_probs=63.0

Q ss_pred             hhhhcccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchH---HHHHHHHHHHHHHHcCCHHHHHHH
Q psy17599         17 LSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEK---AIETFHLLSKAIEVLLDKSARAAY   89 (180)
Q Consensus        17 ~~~~~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~---a~~~f~~i~~Ay~iL~dp~~R~~Y   89 (180)
                      .++....+.+.|||+||||+++++..+||++||+++++|||||+++.+.   +.+.|..|++||++|+||.+|..|
T Consensus       107 ssl~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          107 STMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             HHGGGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            3344444555799999999999999999999999999999999976543   788999999999999999998765

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.72  E-value=1.4e-18  Score=121.81  Aligned_cols=63  Identities=27%  Similarity=0.353  Sum_probs=56.9

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHcCCHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD-EKAIETFHLLSKAIEVLLDKSAR   86 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R   86 (180)
                      ....++|+||||+++||.++||++||+++++||||+++++ +.+.+.|+.|++||++|+|+..|
T Consensus        13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r   76 (88)
T 1iur_A           13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL   76 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence            3457999999999999999999999999999999999876 45789999999999999987654

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.72  E-value=1.4e-18  Score=122.64  Aligned_cols=65  Identities=17%  Similarity=0.151  Sum_probs=55.0

Q ss_pred             hhhcccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHcCC
Q psy17599         18 SSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE---KAIETFHLLSKAIEVLLD   82 (180)
Q Consensus        18 ~~~~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~iL~d   82 (180)
                      ++...-+.+.++|.+|||+++||..+||+|||+++++|||||+++++   .+...|..|++||++|.+
T Consensus        24 ~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           24 TMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             HGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            33333344468999999999999999999999999999999998764   378899999999999964

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.72  E-value=4.6e-19  Score=151.08  Aligned_cols=71  Identities=34%  Similarity=0.498  Sum_probs=0.0

Q ss_pred             CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         24 IKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      +...|||+||||+++||.++||+|||+++++||||++++ +.+.+.|+.|++||++|+||.+|..||.++..
T Consensus        25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~   95 (329)
T 3lz8_A           25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH   95 (329)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence            445799999999999999999999999999999999974 57889999999999999999999999998543

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.70  E-value=4.2e-18  Score=116.97  Aligned_cols=60  Identities=20%  Similarity=0.235  Sum_probs=54.9

Q ss_pred             CcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHH
Q psy17599         26 DLDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAY   89 (180)
Q Consensus        26 ~~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~Y   89 (180)
                      ..++|+||||+++  ++..+|+++||++++++|||++++    .+.|+.|+.||++|+||..|..+
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~   71 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRM   71 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHH
Confidence            3589999999999  999999999999999999999864    47899999999999999988763

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.70  E-value=4.3e-18  Score=123.16  Aligned_cols=67  Identities=18%  Similarity=0.188  Sum_probs=56.3

Q ss_pred             hhhhcccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---ch----HHHHHHHHHHHHHHHcCCHH
Q psy17599         17 LSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPD---DE----KAIETFHLLSKAIEVLLDKS   84 (180)
Q Consensus        17 ~~~~~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~---~~----~a~~~f~~i~~Ay~iL~dp~   84 (180)
                      .++....+.+.|||.|||++. ||..+||+|||+++++|||||+++   ++    .|.+.|+.|++||++|+||.
T Consensus        31 ~~l~~~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           31 STLQYILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TTGGGTSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            344444556789999999996 999999999999999999999863   11    46789999999999999985

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.69  E-value=6.6e-19  Score=129.02  Aligned_cols=63  Identities=29%  Similarity=0.313  Sum_probs=58.4

Q ss_pred             CcchhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSE--QDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSV   92 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~--~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~   92 (180)
                      ..|||+||||+++++.  .+||++||++++++|||++++    .+.|+.|+.||+||+||.+|..||.+
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~   71 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDF   71 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhc
Confidence            4699999999999999  999999999999999999975    47899999999999999999999853

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.69  E-value=1.3e-18  Score=135.99  Aligned_cols=65  Identities=28%  Similarity=0.266  Sum_probs=57.8

Q ss_pred             CcchhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCS--EQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as--~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ..|||+||||+++|+  .++|++|||++++++|||++++    .+.|+.|++||++|+||.+|..||.++.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            469999999999998  6999999999999999999975    3789999999999999999999999874

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.65  E-value=3.8e-17  Score=109.92  Aligned_cols=59  Identities=20%  Similarity=0.270  Sum_probs=51.9

Q ss_pred             CCCcchhhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHH
Q psy17599         24 IKDLDLYGLLELTI-DCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSAR   86 (180)
Q Consensus        24 ~~~~d~Y~iLgv~~-~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R   86 (180)
                      +...++|+||||++ ++|.++|+++||++++.+|||++++    .+.|..|+.||++|+|+..|
T Consensus        11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence            34469999999999 7999999999999999999999753    36899999999999987644

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.62  E-value=3.8e-17  Score=151.42  Aligned_cols=75  Identities=37%  Similarity=0.578  Sum_probs=40.8

Q ss_pred             cCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17599         23 DIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRRKE   97 (180)
Q Consensus        23 ~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~~~   97 (180)
                      .....|||+||||+++||.++||+|||+++++||||++++++.+.+.|+.|+.||++|+||.+|..||.++....
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~   91 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL   91 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccc
Confidence            345689999999999999999999999999999999998778889999999999999999999999999886544

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.09  E-value=5.2e-11  Score=100.28  Aligned_cols=66  Identities=36%  Similarity=0.539  Sum_probs=56.2

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD---EKAIETFHLLSKAIEVLLDKSARAAYDS   91 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~iL~dp~~R~~YD~   91 (180)
                      ..++|.+||++.+++..+|+++|+++++.+|||+.+++   ..+...|..|++||++|+||.+|..||.
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            35899999999999999999999999999999999764   3477899999999999999999999996

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.97  E-value=6.9e-10  Score=73.15  Aligned_cols=50  Identities=12%  Similarity=0.056  Sum_probs=44.6

Q ss_pred             chhhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcC
Q psy17599         28 DLYGLLELTID---CSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLL   81 (180)
Q Consensus        28 d~Y~iLgv~~~---as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~   81 (180)
                      +-|.||||+++   ++.++|+++||++...+|||++++    .-.+..|+.|+++|.
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~   57 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLK   57 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHH
Confidence            45889999999   999999999999999999999764    467888999999885

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=86.34  E-value=0.38  Score=43.50  Aligned_cols=47  Identities=13%  Similarity=0.159  Sum_probs=36.2

Q ss_pred             CCcchhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDCSE--QDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEV   79 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~as~--~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~i   79 (180)
                      ...|||.+||++.+...  ..|+++||++++..+++        .+++..+..|+.|
T Consensus       627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            34569999999776655  67999999999966554        3678888888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	180
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	6e-12
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	2e-10
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	7e-10
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	1e-09
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	8e-09
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	3e-08
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	1e-07
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	7e-06

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 56.6 bits (136), Expect = 6e-12
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y +L ++    E++IR AY++ A+K HPD+N  D++A   F  + +A EVL D   RA
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 88 AYD 90
          AYD
Sbjct: 64 AYD 66

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.8 bits (126), Expect = 2e-10
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 18 SSIMADIKDL--DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIE------T 69
          SS MA  + L  D Y +L      +  D++  Y+K  L  HPDK   D  A         
Sbjct: 5  SSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQK 64

Query: 70 FHLLSKAIEVLLDKSARAAYD 90
          F  + +A ++L ++  +  YD
Sbjct: 65 FIEIDQAWKILGNEETKKKYD 85

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.5 bits (123), Expect = 7e-10
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD---EKAIETFHLLSKAIEVLLDKS 84
            +  + +    + + ++  YRK  L  HPDK       + A   F  L+ A     ++ 
Sbjct: 34 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 93

Query: 85 ARAAY 89
           +  Y
Sbjct: 94 QKPLY 98

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 1e-09
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARA 87
          D Y  L L    S+++I+ AYR++AL+ HPDKN  +  A E F  +++A +VL D   R 
Sbjct: 4  DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKRE 62

Query: 88 AYD 90
           +D
Sbjct: 63 IFD 65

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 48.1 bits (114), Expect = 8e-09
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 27 LDLYGLLELTIDCS--EQDIRSAYRKKALKCHPDKNPDDEKA-----IETFHLLSKAIEV 79
          +D + L  L        Q +   ++    + HPDK     +A     ++    +++A + 
Sbjct: 1  MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60

Query: 80 LLDKSARAAYD 90
          L     RA Y 
Sbjct: 61 LRHPLMRAEYL 71

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 46.9 bits (111), Expect = 3e-08
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 6/77 (7%)

Query: 17 LSSIMADIKDLDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLS 74
          +  +++      L  LL+L          ++ AY++++L  HPDK             L+
Sbjct: 1  MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHAL----MQELN 56

Query: 75 KAIEVLLDKSARAAYDS 91
                  +      + 
Sbjct: 57 SLWGTFKTEVYNLRMNL 73

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 1e-07
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 28 DLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAI-ETFHLLSKAIEVLLDKSAR 86
          ++  ++E      E + +   R+  LK HPDKNP++     E F  L   I  L  ++  
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76

Query: 87 AAYDSVIRRK 96
                  R+
Sbjct: 77 DQNADRASRR 86

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 41.3 bits (96), Expect = 7e-06
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 25  KDLDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLD 82
           + L L  LL L      +   +R AY KK  + HPDK  D+EK       ++   + + D
Sbjct: 6   ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEK----MKKMNTLYKKMED 61

Query: 83  KSARAAYDSVIRRKEEVKIRNSKLDATRKKFK----EDLERREK 122
               A         +  +I     D   + +     E+L   E+
Sbjct: 62  GVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEE 105

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	180
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.91
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.85
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.78
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.78
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.74
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.71
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.66

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.3e-24  Score=146.62  Aligned_cols=69  Identities=39%  Similarity=0.629  Sum_probs=65.5

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIR   94 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~   94 (180)
                      ..|||+||||+++||.++|++||+++++.||||++++++.+...|..|+.||+||+||.+|..||.+|.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~   70 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH   70 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTT
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCc
Confidence            469999999999999999999999999999999998878888999999999999999999999999874

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-22  Score=136.89  Aligned_cols=69  Identities=36%  Similarity=0.574  Sum_probs=64.0

Q ss_pred             CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVIRR   95 (180)
Q Consensus        26 ~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~~~   95 (180)
                      ..|||+||||+++||.++|+++|+++++++|||+++. +.+.+.|..|++||+||+||.+|..||.++..
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~-~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~   70 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE   70 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccc-hhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhh
Confidence            4699999999999999999999999999999999974 67788999999999999999999999987643

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=3.4e-22  Score=140.18  Aligned_cols=75  Identities=24%  Similarity=0.415  Sum_probs=65.8

Q ss_pred             hhcccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17599         19 SIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDD------EKAIETFHLLSKAIEVLLDKSARAAYDSV   92 (180)
Q Consensus        19 ~~~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~   92 (180)
                      +........|||+||||+++++.++|+++|+++++.||||+++.+      +.+.+.|..|++||+||+||.+|..||..
T Consensus         8 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~   87 (94)
T d1wjza_           8 MALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQ   87 (94)
T ss_dssp             SCCSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred             chhhhhhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence            334444567999999999999999999999999999999998754      44778899999999999999999999986


Q ss_pred             H
Q psy17599         93 I   93 (180)
Q Consensus        93 ~   93 (180)
                      +
T Consensus        88 ~   88 (94)
T d1wjza_          88 R   88 (94)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.78  E-value=3e-21  Score=139.69  Aligned_cols=64  Identities=28%  Similarity=0.297  Sum_probs=58.7

Q ss_pred             CcchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         26 DLDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        26 ~~d~Y~iLgv~~~a--s~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      ..|||+||||+.+|  +..+||+||+++|++|||||+|+    .+.|+.|+.||+||+||.+|..||.++
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~~   72 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFG   72 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhccC
Confidence            46999999999998  78899999999999999999975    357999999999999999999999754

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=6.8e-20  Score=123.36  Aligned_cols=67  Identities=21%  Similarity=0.314  Sum_probs=58.9

Q ss_pred             cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17599         27 LDLYGLLELTID--CSEQDIRSAYRKKALKCHPDKNPDDE-----KAIETFHLLSKAIEVLLDKSARAAYDSVI   93 (180)
Q Consensus        27 ~d~Y~iLgv~~~--as~~eIkkayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~iL~dp~~R~~YD~~~   93 (180)
                      +|||+||||+++  ++.++|+++|+++++.+|||++.+.+     .+...|..|++||+||+||.+|..|+..+
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~l   74 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            589999999985  45899999999999999999976542     35678999999999999999999998765

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.74  E-value=3.3e-19  Score=120.88  Aligned_cols=64  Identities=19%  Similarity=0.209  Sum_probs=57.7

Q ss_pred             CCcchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy17599         25 KDLDLYGLLELTIDC--SEQDIRSAYRKKALKCHPDKNPDDEKAIETFHLLSKAIEVLLDKSARAAYDSV   92 (180)
Q Consensus        25 ~~~d~Y~iLgv~~~a--s~~eIkkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~   92 (180)
                      ...+||+||||++++  +..+|++||+++++.||||++++    .+.|..|+.||++|+|+.+|..||..
T Consensus         9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d~~~r~~~~~~   74 (79)
T d1fafa_           9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMNLG   74 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCCHHHHHHHccC
Confidence            346999999999987  89999999999999999999864    36899999999999999999998753

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.71  E-value=3.6e-19  Score=125.46  Aligned_cols=73  Identities=18%  Similarity=0.213  Sum_probs=62.3

Q ss_pred             hhhhcccCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHcCCHHHHHHH
Q psy17599         17 LSSIMADIKDLDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE---KAIETFHLLSKAIEVLLDKSARAAY   89 (180)
Q Consensus        17 ~~~~~~~~~~~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~iL~dp~~R~~Y   89 (180)
                      +++...-+.+.++|.+|||++.+|.++|+++|+++++.||||++++++   .+...|..|++||++|+||.+|+.|
T Consensus        23 ~~l~~vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          23 STMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TTGGGTSCTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             HhhhhhcCCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            344444455678899999999999999999999999999999987543   3678899999999999999998766

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.9e-18  Score=115.96  Aligned_cols=57  Identities=30%  Similarity=0.443  Sum_probs=52.8

Q ss_pred             cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHHcCCH
Q psy17599         27 LDLYGLLELTIDCSEQDIRSAYRKKALKCHPDKNPDDE-KAIETFHLLSKAIEVLLDK   83 (180)
Q Consensus        27 ~d~Y~iLgv~~~as~~eIkkayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~iL~dp   83 (180)
                      .|+|+||||++++|.++||+||++++++||||++|+++ .+.+.|..|+.||++|+++
T Consensus        16 ~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~~   73 (88)
T d1iura_          16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQ   73 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999998774 5788999999999999743