Psyllid ID: psy17621

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45
Protein Sequence
MTMRRLRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGSPL
Secondary Structure (PSIPRED)
ccccccHHHHHcccccEEEcccccccccEEcccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHHHHHcccccEEEccccccccEEEEEEEccccEEEccccccccccHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHcccccccHcHHHHccccccHHHHHHHHHHccccccccccHHHHHHHHHHcccccHHEEccccccccccccEHcccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccEEEEccHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHHccccHHHHccccHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHccccHHHHHHHHHHHHHHHHHcEEcccccccccEEEEEEEccccEEEccccccccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MTMRRLRINFYFSYLKLTcsttykvskwqtasrpncgegmDFLAFGKILsglsqcgawgcfdmmtanRYWTKKAIYdfgktskprtewmLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKkgedrgfqlGDLSEMLLQLEDSCMNLQSMagsayigpflPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWEthknprvieqclvpnRLEHLEQLKDGLEACEKSLQDYLTDkrnafprfffisddellsilgsssptAIQEHIVKMFDNVqslkmadsespgvkTISAMISCEnevmdfrtpqltfgEIEQWMTRVLDemmtgspl
Flexible Loop (DISEMBL)
mtmrrlriNFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVkrwssdirempQCKALEKYLKDFKKSVALFVELKHealrerhwtelmkktgvedelktvkrwssdirempqCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDemmtgspl
Low Complexity Region (SEG)
MTMRRLRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGSPL
Disordered region (IsUnstruct)
*****LRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQ************KTISAMISCENEVMDFRTPQLTFGEIEQWMTRVL*********
Disordered Region (DISOPRED)
***RRLR*NFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRW*******P**KALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGSP*
Disordered Region (DISEMBL)
MTMRRLRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGSPL
Disordered Region (DISPRO)
*TMRRLRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTMRRLRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHxxxxxxxxxxxxxxxxxxxxxKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGSPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	448	2.2.26 [Sep-21-2011]
Q9SMH3	4625	Dynein-1-alpha heavy chai	N/A	N/A	0.513	0.049	0.356	4e-42
Q8IVF4	4471	Dynein heavy chain 10, ax	yes	N/A	0.343	0.034	0.537	4e-39
Q9C0G6	4158	Dynein heavy chain 6, axo	no	N/A	0.506	0.054	0.273	9e-23
P39057	4466	Dynein beta chain, ciliar	N/A	N/A	0.363	0.036	0.372	4e-20
Q9NYC9	4486	Dynein heavy chain 9, axo	no	N/A	0.363	0.036	0.354	3e-19
P23098	4466	Dynein beta chain, ciliar	N/A	N/A	0.363	0.036	0.360	4e-19
Q63164	4516	Dynein heavy chain 1, axo	no	N/A	0.453	0.044	0.284	9e-19
Q69Z23	4481	Dynein heavy chain 17, ax	no	N/A	0.486	0.048	0.294	9e-19
P0C6F1	4456	Dynein heavy chain 2, axo	no	N/A	0.562	0.056	0.267	9e-19
Q39565	4568	Dynein beta chain, flagel	N/A	N/A	0.361	0.035	0.362	1e-18

>sp|Q9SMH3|DYH1A_CHLRE Dynein-1-alpha heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii GN=DHC1 PE=1 SV=1

 Score =  172 bits (437), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 151/303 (49%), Gaps = 73/303 (24%)

Query: 140  VKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYT 199
            +K  EDRG+ L    ++L+ LED  +NLQSM  S ++ PFL  V+ WE++LS++ E +  
Sbjct: 1546 MKGPEDRGWVLRSTEDILVLLEDMGLNLQSMMASPFVRPFLTEVRAWEQKLSLIGECIEV 1605

Query: 200  WIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR 259
            W+ +QRKW+YLE       ++   S DIR   Q  A  K   +                 
Sbjct: 1606 WMHVQRKWMYLE-------SIFVGSDDIRH--QLPAEAKRFDNI---------------- 1640

Query: 260  ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPR 319
            +R W ++M  T                                             KN  
Sbjct: 1641 DRQWQKIMNDTA--------------------------------------------KNTV 1656

Query: 320  VIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPT 379
            V++ C+   RL+ L+ L + LE C+KSL +YL  KR AFPRF+FISDDELLSILG+S PT
Sbjct: 1657 VLDACMADGRLDLLKSLSEQLEVCQKSLSEYLDTKRCAFPRFYFISDDELLSILGTSDPT 1716

Query: 380  AIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVL 439
            ++QEH++K+FDN  +L        G KTI+ M+S E E  +FR      G +E WMT V 
Sbjct: 1717 SVQEHMLKLFDNCAALVFGR----GNKTITGMVSSEKEGFEFRNVVPIEGAVELWMTNVE 1772

Query: 440  DEM 442
             EM
Sbjct: 1773 AEM 1775

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for assembly of the I1 inner arm complex and its targeting to the appropriate axoneme location. Also required for phototaxis.
Chlamydomonas reinhardtii (taxid: 3055)

>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4

 Score =  162 bits (411), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/162 (53%), Positives = 109/162 (67%), Gaps = 8/162 (4%)

Query: 283  SSDIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGL 340
              DIR ++P+  K  +   K FK+     IM ET K+P +   C  PNRL  L+ + +GL
Sbjct: 1493 GGDIRSQLPEEAKKFDNIDKVFKR-----IMGETLKDPVIKRCCEAPNRLSDLQNVSEGL 1547

Query: 341  EACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADS 400
            E C+KSL DYL  KRNAFPRFFFISDDELLSILGSS P  +QEH++KM+DN+ SL+  D 
Sbjct: 1548 EKCQKSLNDYLDSKRNAFPRFFFISDDELLSILGSSDPLCVQEHMIKMYDNIASLRFNDG 1607

Query: 401  ESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
            +S G K +SAMIS E EVM+FR      G +E WMT VL+EM
Sbjct: 1608 DS-GEKLVSAMISAEGEVMEFRKILRAEGRVEDWMTAVLNEM 1648

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.

Homo sapiens (taxid: 9606)

>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3

 Score =  108 bits (270), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 87/314 (27%)

Query: 148  FQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKW 207
            F LG   ++ + L+DS +N+ ++A S Y+GP    V EW+K+L++ ++ L  W+  QR W
Sbjct: 1049 FILGGTDDIQVLLDDSTINVATLASSRYLGPLKTRVDEWQKQLALFNQTLEEWLTCQRNW 1108

Query: 208  LYLEGVEDELKTVKRWSSDI-REMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTEL 266
            LYLE + +        + DI R++P                 +F+++      ++ W E+
Sbjct: 1109 LYLESIFN--------APDIQRQLP-------------AEAKMFLQV------DKSWKEI 1141

Query: 267  MKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLV 326
            M+K         V R  + +R   Q   LE     F+ + AL                  
Sbjct: 1142 MRK---------VNRLPNALRAATQPGLLET----FQNNNAL------------------ 1170

Query: 327  PNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSS-SPTAIQEHI 385
                         L+  +K L+ YL  KR  FPRF+F+S+DELL IL  + +P A+Q H+
Sbjct: 1171 -------------LDQIQKCLEAYLESKRVIFPRFYFLSNDELLEILAQTRNPQAVQPHL 1217

Query: 386  VKMFDNVQSLKM-----ADSESPGV---------KTISAMISCENEVMDFRTPQLTFGEI 431
             K FD++  L+      A+ + PG+           I AM+S E E +         G +
Sbjct: 1218 RKCFDSISKLEFALMPPAEGKIPGIDGEPEKVYTNDILAMLSPEGERVSLGKGLKARGNV 1277

Query: 432  EQWMTRVLDEMMTG 445
            E+W+ +V + M T 
Sbjct: 1278 EEWLGKVEEAMFTS 1291

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Homo sapiens (taxid: 9606)

>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1

 Score = 99.8 bits (247), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 92/172 (53%), Gaps = 9/172 (5%)

Query: 275  ELKTVKRWSSDIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEH 332
             L+++   S DIR ++P+  K  +    DFK+  A     E  K P V+E        + 
Sbjct: 1503 HLESIFIGSEDIRNQLPEDSKRFDGIDTDFKELAA-----EMEKTPNVVEATNKARLFDR 1557

Query: 333  LEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILG-SSSPTAIQEHIVKMFDN 391
            LE ++  L  CEK+L +YL  KR AFPRF+F+S  +LL IL   ++PT +Q H+ K+FDN
Sbjct: 1558 LEAIQGSLVVCEKALAEYLETKRLAFPRFYFVSSADLLDILSQGNNPTQVQRHLSKLFDN 1617

Query: 392  VQSLKM-ADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
            +  LK   D E    K    M S E E +DF       G++E W+ RV+D M
Sbjct: 1618 MAKLKFKQDDEGNDTKLALGMYSKEGEYVDFDKECECTGQVEVWLNRVMDTM 1669

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Anthocidaris crassispina (taxid: 7629)

>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3

 Score = 96.7 bits (239), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 9/172 (5%)

Query: 275  ELKTVKRWSSDIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEH 332
             L+++   S DIR ++PQ  K  E    DFK+     + ++  K P V++    P   E 
Sbjct: 1521 HLESIFTGSEDIRAQLPQDSKRFEGIDIDFKE-----LAYDAQKIPNVVQTTNKPGLYEK 1575

Query: 333  LEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGS-SSPTAIQEHIVKMFDN 391
            LE ++  L  CEK+L +YL  KR AFPRF+F+S  +LL IL + ++P  +Q H+ K+FDN
Sbjct: 1576 LEDIQGRLCLCEKALAEYLDTKRLAFPRFYFLSSSDLLDILSNGTAPQQVQRHLSKLFDN 1635

Query: 392  VQSLKMA-DSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
            +  ++   D+     KT   M S E E + F  P    G++E W+  VL  M
Sbjct: 1636 MAKMRFQLDASGEPTKTSLGMYSKEEEYVAFSEPCDCSGQVEIWLNHVLGHM 1687

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Homo sapiens (taxid: 9606)

>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1

 Score = 96.3 bits (238), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 9/172 (5%)

Query: 275  ELKTVKRWSSDIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEH 332
             L+++   S DIR ++P+  K  +    DFK+  +     E  K P V+E        + 
Sbjct: 1503 HLESIFIGSEDIRNQLPEDSKRFDGIDTDFKELAS-----EMEKTPNVVEATNRARLYDR 1557

Query: 333  LEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILG-SSSPTAIQEHIVKMFDN 391
            LE ++  L  CEK+L +YL  KR AFPRF+F+S  +LL IL   ++P+ +Q H+ K+FDN
Sbjct: 1558 LEAIQGSLVVCEKALAEYLETKRLAFPRFYFVSSADLLDILSQGNNPSQVQRHLSKLFDN 1617

Query: 392  VQSLKM-ADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
            +  LK   D E    K    M S E E +DF       G++E W+ RV+D M
Sbjct: 1618 MAKLKFKQDDEGNDTKLALGMYSKEGEYVDFDKECECTGQVEVWLNRVMDAM 1669

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Tripneustes gratilla (taxid: 7673)

>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 110/281 (39%), Gaps = 78/281 (27%)

Query: 160  LEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKT 219
            L+D  +  QSM+ S Y  PF   +  WE +L +  EVL  W+  QR WLYLE +      
Sbjct: 1403 LDDHIVMTQSMSFSPYKKPFEQRINSWETKLKLTQEVLEEWLNCQRSWLYLEPIFS---- 1458

Query: 220  VKRWSSDI-REMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKT 278
                S DI R++P                   VE K     ER W ++MK          
Sbjct: 1459 ----SEDITRQLP-------------------VESKRYQTMERIWRKIMKNA-------- 1487

Query: 279  VKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKD 338
                                                ++N  VI  C     L+ L     
Sbjct: 1488 ------------------------------------YENREVINVCSDQRLLDSLRDCNK 1511

Query: 339  GLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSS-SPTAIQEHIVKMFDNVQSLKM 397
             L+  +K L +YL  KR AFPRF+F+SDDELL IL  +  PTA+Q H+ K F+N+  L  
Sbjct: 1512 LLDLVQKGLSEYLETKRTAFPRFYFLSDDELLEILSQTKDPTAVQPHLRKCFENIARLLF 1571

Query: 398  ADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRV 438
             +        I+ M S E E +           +E W+  V
Sbjct: 1572 QEDLE-----ITHMYSAEGEEVKLSFSIYPSSNVEDWLLEV 1607

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Rattus norvegicus (taxid: 10116)

>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 135/292 (46%), Gaps = 74/292 (25%)

Query: 155  EMLLQ-LEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGV 213
            E+L++ LED+ + LQ++  S Y+  FL  V  W+++LS    V+  W ++QR W +LE  
Sbjct: 1436 EVLVETLEDNQVQLQNLMMSKYLSHFLKEVTSWQQKLSTADSVISIWFEVQRTWSHLE-- 1493

Query: 214  EDELKTVKRWSSDIR-EMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGV 272
                 ++   S DIR ++P+         D K+  A+  E K  AL             +
Sbjct: 1494 -----SIFIGSEDIRAQLPE---------DSKRFDAIDQEFK--AL-------------M 1524

Query: 273  EDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEH 332
            ED +KT      ++ E      L   L++ K S+A+                        
Sbjct: 1525 EDAVKT-----PNVVEATNKPDLYNKLENLKMSLAV------------------------ 1555

Query: 333  LEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSS-PTAIQEHIVKMFDN 391
                      CEK+L +YL  KR AFPRF+F+S  +LL IL + + P  +  H+ K+FD+
Sbjct: 1556 ----------CEKALAEYLETKRLAFPRFYFVSSADLLDILSNGNDPVEVSRHLSKLFDS 1605

Query: 392  VQSLKM-ADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
            +  LK   D+    +K    M S E+E +DF       G++E W+ RVLD M
Sbjct: 1606 LCKLKFRLDASGKPLKFGLGMYSKEDEFVDFDKECDLSGQVEVWLNRVLDRM 1657

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Mus musculus (taxid: 10090)

>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 144/337 (42%), Gaps = 85/337 (25%)

Query: 113  FSKIRAGNDRAMKDYLGAQN-------AQLDALVVK-KGEDRGFQLGDLSEMLLQLEDSC 164
             ++I A   + +   +G QN        QLD +  K KG  R   L    E+   LED+ 
Sbjct: 1386 IAEISASATKELAIEVGLQNIAKTWDSTQLDIVPYKDKGHHR---LRGTEEVFQALEDNQ 1442

Query: 165  MNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWS 224
            + L +M  S ++  F   V  WE+ LS++ EV+   + +QR+W+YLE +           
Sbjct: 1443 VALSTMKASRFVKAFEKDVDHWERCLSLILEVIEMVLTVQRQWMYLENI--------FLG 1494

Query: 225  SDIR-EMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWS 283
             DIR ++P   AL   + +  K++   +   + ALR  H+  L+ +T +E          
Sbjct: 1495 EDIRKQLPNESALFDQVNNNWKAIMDRMNKDNNALRSTHYPGLL-ETLIE---------- 1543

Query: 284  SDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEAC 343
                       +   L+D +KS+ ++                                  
Sbjct: 1544 -----------MNAILEDIQKSLDMY---------------------------------- 1558

Query: 344  EKSLQDYLTDKRNAFPRFFFISDDELLSILGSS-SPTAIQEHIVKMFDNVQSLKMADSES 402
                   L  KR+ FPRF+F+S+D+LL ILG S +P A+Q H+ K FDN++ LK+     
Sbjct: 1559 -------LETKRHIFPRFYFLSNDDLLEILGQSRNPEAVQPHLKKCFDNIKLLKIQKVGG 1611

Query: 403  PGVK-TISAMISCENEVMDFRTPQLTFGEIEQWMTRV 438
               K     M S + E +DF  P L  G +E W+  V
Sbjct: 1612 SSSKWEAVGMFSGDGEYIDFLHPVLLEGPVESWLGDV 1648

Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.

Mus musculus (taxid: 10090)

>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA4 PE=3 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)

Query: 276  LKTVKRWSSDIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHL 333
            L+++   S+DIR ++P+  K  +    DF++     +M        V+E C +  R E L
Sbjct: 1571 LESIFIGSADIRVQLPEDSKRFDAVNADFQE-----LMRTAPDITNVVEACTLDGRQERL 1625

Query: 334  EQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILG-SSSPTAIQEHIVKMFDNV 392
            E ++  LE CEK+LQ+YL  KR AFPRF+F+S  +LL IL   S+P  I  H+ K FDN+
Sbjct: 1626 ENMQSMLEQCEKALQEYLETKRVAFPRFYFVSPADLLDILSKGSNPQLILRHLQKCFDNI 1685

Query: 393  QSLKM-ADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
             +L    D      K  + M S E EV++F       G +E W+  V+D M
Sbjct: 1686 DNLSFRKDERGDPTKIATHMHSKEGEVVEFVEDCSCDGPVEVWLQNVVDSM 1736

Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.

Chlamydomonas reinhardtii (taxid: 3055)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	448
303285276	4697	inner dynein arm heavy chain 1-alpha [Mi	0.504	0.048	0.371	2e-44
156368872	4309	predicted protein [Nematostella vectensi	0.522	0.054	0.381	9e-43
449476739	4480	PREDICTED: LOW QUALITY PROTEIN: dynein h	0.537	0.053	0.383	1e-42
449279315	3191	Dynein heavy chain 10, axonemal, partial	0.502	0.070	0.392	1e-42
194214400	4500	PREDICTED: dynein heavy chain 10, axonem	0.555	0.055	0.365	5e-41
292613807	4559	PREDICTED: dynein heavy chain 10, axonem	0.511	0.050	0.361	2e-40
159490411	4625	flagellar inner arm dynein 1 heavy chain	0.513	0.049	0.356	2e-40
30580468	4625	RecName: Full=Dynein-1-alpha heavy chain	0.513	0.049	0.356	2e-40
302843856	4651	flagellar inner arm dynein 1 heavy chain	0.513	0.049	0.359	6e-39
194745138	5094	GF18580 [Drosophila ananassae] gi|190628	0.506	0.044	0.360	3e-38

>gi|303285276|ref|XP_003061928.1| inner dynein arm heavy chain 1-alpha [Micromonas pusilla CCMP1545] gi|226456339|gb|EEH53640.1| inner dynein arm heavy chain 1-alpha [Micromonas pusilla CCMP1545]

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/307 (37%), Positives = 155/307 (50%), Gaps = 81/307 (26%)

Query: 140  VKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYT 199
            VK  EDRGF L    E+ + L+D  + LQSM  S Y  PF+  V+ WE +LS++SEV+  
Sbjct: 1564 VKGEEDRGFTLRSTDEVTVTLDDMALTLQSMMSSRYAKPFIDDVRAWEAKLSLISEVIEV 1623

Query: 200  WIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR 259
            W ++QRKW+YLE       ++   S DIR                       +L  EA R
Sbjct: 1624 WNEVQRKWMYLE-------SIFIGSDDIRH----------------------QLPEEAKR 1654

Query: 260  ----ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETH 315
                E+HW  LM                                             +T+
Sbjct: 1655 FDRIEKHWQMLMA--------------------------------------------DTN 1670

Query: 316  KNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGS 375
            KN  +++ C V +RL  L++L + LE C+KSL +YL  KRNAFPRFFFISDDELLS+LG+
Sbjct: 1671 KNSNILDACSVKDRLPFLQELHEQLELCQKSLSEYLDTKRNAFPRFFFISDDELLSVLGT 1730

Query: 376  SSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWM 435
            S PT++QEH++K++DN  +LK       G K+++ MIS E E  DFR    T G +E WM
Sbjct: 1731 SDPTSVQEHMLKLYDNCAALKFGR----GNKSVTGMISAEGESFDFRAACTTEGAVEVWM 1786

Query: 436  TRVLDEM 442
              V  EM
Sbjct: 1787 LGVETEM 1793

Source: Micromonas pusilla CCMP1545

Species: Micromonas pusilla

Genus: Micromonas

Order: Mamiellales

Class: Mamiellophyceae

Phylum: Chlorophyta

Superkingdom: Eukaryota

>gi|156368872|ref|XP_001627915.1| predicted protein [Nematostella vectensis] gi|156214878|gb|EDO35852.1| predicted protein [Nematostella vectensis]

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 156/307 (50%), Gaps = 73/307 (23%)

Query: 137  ALVVKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEV 196
            A  +K  ++RGF LG + E+L  L+D+ MNLQSM+ S ++GPFL  V +WEK LS + EV
Sbjct: 1271 AKYMKGTQERGFVLGTVDEILQILDDNAMNLQSMSASRFVGPFLETVNKWEKSLSHIGEV 1330

Query: 197  LYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHE 256
            +  W+ +QRKW+YLE +            DIR                       +L  E
Sbjct: 1331 VEVWMVVQRKWMYLESI--------FIGGDIR----------------------AQLPEE 1360

Query: 257  ALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHK 316
            A +             +D  KT K+  +D  + P+                  ++   H 
Sbjct: 1361 ARK------------FDDIDKTFKKIMADTAKNPK------------------VLEACHA 1390

Query: 317  NPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSS 376
              R+ +   + N LE           C+KSL DYL  KRNAFPRFFFISDDELLSILGS 
Sbjct: 1391 PNRLDQLQFIVNGLEK----------CQKSLNDYLDSKRNAFPRFFFISDDELLSILGSH 1440

Query: 377  SPTAIQEHIVKMFDNVQSLKMADSESPGVKTI-SAMISCENEVMDFRTPQLTFGEIEQWM 435
             PT +QEH++KMFDN+ SL+    E    +T+ +AMIS E E MDFR      G +E WM
Sbjct: 1441 DPTCVQEHMIKMFDNIASLRF--QEGSNKETLATAMISSEGESMDFRQAVPAEGRVEDWM 1498

Query: 436  TRVLDEM 442
            T VL EM
Sbjct: 1499 TSVLKEM 1505

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|449476739|ref|XP_004176474.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 10, axonemal [Taeniopygia guttata]

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 160/313 (51%), Gaps = 72/313 (23%)

Query: 131  QNAQLDALVVKKG-EDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKR 189
            +N +    V  KG E RGF LG + E+L  L+D+  NLQS+ GS ++GPFL   Q+WEK 
Sbjct: 1499 ENMKFPVEVYTKGTETRGFILGSVEEILETLDDNNANLQSVLGSRFVGPFLSSAQKWEKI 1558

Query: 190  LSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVAL 249
            LS++SEV   WI +QRKW+YLE +          + DIR       L + +K F +   +
Sbjct: 1559 LSLISEVSEIWISVQRKWMYLESI--------FVAGDIR-----SQLPEEVKMFDRVDQM 1605

Query: 250  FVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALF 309
            F ++  E               V+D +            +  C  +   L D        
Sbjct: 1606 FKQIMEET--------------VKDPI------------IKNCCEVPNRLSDL------- 1632

Query: 310  IMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDEL 369
                 H    V+E+C                   +KSL DYL  KRNAFPRFFFISDDEL
Sbjct: 1633 -----HHINDVLEKC-------------------QKSLNDYLDSKRNAFPRFFFISDDEL 1668

Query: 370  LSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFG 429
            LSILGSSS   +QEH++KMFDN+ SL+  D ++   K  +AMIS E EVM+FR      G
Sbjct: 1669 LSILGSSSALCVQEHMIKMFDNIASLRFKDGDNDE-KIATAMISAEGEVMEFRQDVPAVG 1727

Query: 430  EIEQWMTRVLDEM 442
             +E WMT VL+EM
Sbjct: 1728 RVENWMTVVLEEM 1740

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449279315|gb|EMC86950.1| Dynein heavy chain 10, axonemal, partial [Columba livia]

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 158/298 (53%), Gaps = 73/298 (24%)

Query: 146 RGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQR 205
           RGF LG + E+L  L+D+ +NLQS+ GS ++GPF   V  WEK LS++ EV+  W+ +QR
Sbjct: 239 RGFILGSVDEILDTLDDNNVNLQSILGSRFVGPFRSTVYRWEKTLSLIGEVIEIWMVVQR 298

Query: 206 KWLYLEGVEDELKTVKRWSSDIR-EMPQCKALEKYLKDFKKSVALFVELKHEALRERHWT 264
           KW+YLE +            DIR ++P+                   E K     +R + 
Sbjct: 299 KWMYLESI--------FIGGDIRTQLPE-------------------EAKVFDGIDRMFK 331

Query: 265 ELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQC 324
           E+M +T V+D   T+K+          C      L DF+           H N       
Sbjct: 332 EIMDET-VKD--PTIKK----------CCEAPNRLSDFR-----------HIN------- 360

Query: 325 LVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEH 384
                        D LE C+KSL DYL  KRNAFPRFFFISD+ELLSILGS++P  +QEH
Sbjct: 361 -------------DVLEKCQKSLNDYLDSKRNAFPRFFFISDEELLSILGSTNPLCVQEH 407

Query: 385 IVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
           ++KM+DN+ SL+  D E+   K  +AMIS E EVM+FR      G +E WMT VL+EM
Sbjct: 408 MIKMYDNIASLRFEDGENDE-KIATAMISAEGEVMEFRQAVAARGRVESWMTAVLEEM 464

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194214400|ref|XP_001915485.1| PREDICTED: dynein heavy chain 10, axonemal [Equus caballus]

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/326 (36%), Positives = 178/326 (54%), Gaps = 77/326 (23%)

Query: 121  DRAMKDYLGA-QNAQLDALVVKKG-EDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGP 178
            ++A+K+ L   +N + + +   KG ++RG+ LG + E++  L+D+ +NLQS++GS ++GP
Sbjct: 1425 EKAVKEILDTWENMKFNVVKYYKGTQERGYILGAVDEIIQCLDDNTVNLQSISGSRFVGP 1484

Query: 179  FLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIR-EMP-QCKAL 236
            FL  V +WEK LS++ EV+  W+ +QRKW+YLE +          S DIR ++P + K  
Sbjct: 1485 FLQTVHKWEKTLSLIGEVIEIWMLVQRKWMYLESI--------FISGDIRSQLPDEAKKF 1536

Query: 237  EKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALE 296
            +   + FK+ +A       E L++                  +KR          C+A  
Sbjct: 1537 DNIDRVFKRIMA-------ETLKD----------------PVIKRC---------CEAPN 1564

Query: 297  KYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRN 356
            + L DF +S++                       E LE+ +  L        DYL  KRN
Sbjct: 1565 R-LSDF-QSIS-----------------------EGLERCQKSL-------NDYLDSKRN 1592

Query: 357  AFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCEN 416
            AFPRFFFISDDELLSILG+S P  +QEH++KM+DN+  L+ +D +S G K + AMIS E 
Sbjct: 1593 AFPRFFFISDDELLSILGNSDPLCVQEHMIKMYDNIALLRFSDGDS-GEKLVLAMISAEG 1651

Query: 417  EVMDFRTPQLTFGEIEQWMTRVLDEM 442
            EVM+FR      G +E WMT VL+EM
Sbjct: 1652 EVMEFRKTIRAEGRVEDWMTAVLNEM 1677

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|292613807|ref|XP_698507.4| PREDICTED: dynein heavy chain 10, axonemal [Danio rerio]

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 156/304 (51%), Gaps = 75/304 (24%)

Query: 141  KKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTW 200
            K  ++ GF LG + ++L  L+D  MNLQSMAGS ++GPFL  VQ+WEK LS++SE +  W
Sbjct: 1508 KGTQEHGFILGAVDDILQHLDDDAMNLQSMAGSHFVGPFLATVQQWEKNLSLISETIEVW 1567

Query: 201  IQLQRKWLYLEGVEDELKTVKRWSSDIR-EMP-QCKALEKYLKDFKKSVALFVELKHEAL 258
            + +Q+KW+YLE +            DIR ++P + K  +   K FKK +           
Sbjct: 1568 MLVQQKWMYLESI--------FIGGDIRSQLPEEAKKFDNIDKTFKKIM----------- 1608

Query: 259  RERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNP 318
                 T+ +K  G++                 +C  +   L D +               
Sbjct: 1609 -----TDTVKDPGIK-----------------RCCLVPNRLADLQ--------------- 1631

Query: 319  RVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSP 378
                     N  + LE+ +  L        DYL  KRNAFPRFFFISDDELLSILGSS P
Sbjct: 1632 ---------NLSDGLERCQKSL-------NDYLDSKRNAFPRFFFISDDELLSILGSSEP 1675

Query: 379  TAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRV 438
            T +QEH++KM+DN+ +L+  D+   G    +A++S E EVM+ + P    G +E WMT V
Sbjct: 1676 TCVQEHMIKMYDNIAALRF-DTGMNGEMVANALVSAEGEVMELKQPVPAEGRVEDWMTAV 1734

Query: 439  LDEM 442
            L EM
Sbjct: 1735 LLEM 1738

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|159490411|ref|XP_001703170.1| flagellar inner arm dynein 1 heavy chain alpha [Chlamydomonas reinhardtii] gi|158270710|gb|EDO96546.1| flagellar inner arm dynein 1 heavy chain alpha [Chlamydomonas reinhardtii]

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 151/303 (49%), Gaps = 73/303 (24%)

Query: 140  VKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYT 199
            +K  EDRG+ L    ++L+ LED  +NLQSM  S ++ PFL  V+ WE++LS++ E +  
Sbjct: 1546 MKGPEDRGWVLRSTEDILVLLEDMGLNLQSMMASPFVRPFLTEVRAWEQKLSLIGECIEV 1605

Query: 200  WIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR 259
            W+ +QRKW+YLE       ++   S DIR   Q  A  K   +                 
Sbjct: 1606 WMHVQRKWMYLE-------SIFVGSDDIRH--QLPAEAKRFDNI---------------- 1640

Query: 260  ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPR 319
            +R W ++M  T                                             KN  
Sbjct: 1641 DRQWQKIMNDTA--------------------------------------------KNTV 1656

Query: 320  VIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPT 379
            V++ C+   RL+ L+ L + LE C+KSL +YL  KR AFPRF+FISDDELLSILG+S PT
Sbjct: 1657 VLDACMADGRLDLLKSLSEQLEVCQKSLSEYLDTKRCAFPRFYFISDDELLSILGTSDPT 1716

Query: 380  AIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVL 439
            ++QEH++K+FDN  +L        G KTI+ M+S E E  +FR      G +E WMT V 
Sbjct: 1717 SVQEHMLKLFDNCAALVFGR----GNKTITGMVSSEKEGFEFRNVVPIEGAVELWMTNVE 1772

Query: 440  DEM 442
             EM
Sbjct: 1773 AEM 1775

Source: Chlamydomonas reinhardtii

Species: Chlamydomonas reinhardtii

Genus: Chlamydomonas

Family: Chlamydomonadaceae

Order: Chlamydomonadales

Class: Chlorophyceae

Phylum: Chlorophyta

Superkingdom: Eukaryota

>gi|30580468|sp|Q9SMH3.1|DYH1A_CHLRE RecName: Full=Dynein-1-alpha heavy chain, flagellar inner arm I1 complex; AltName: Full=1-alpha DHC; AltName: Full=Dynein-1, subspecies f gi|5931718|emb|CAB56598.1| 1-alpha dynein heavy chain [Chlamydomonas reinhardtii]

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 151/303 (49%), Gaps = 73/303 (24%)

Query: 140  VKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYT 199
            +K  EDRG+ L    ++L+ LED  +NLQSM  S ++ PFL  V+ WE++LS++ E +  
Sbjct: 1546 MKGPEDRGWVLRSTEDILVLLEDMGLNLQSMMASPFVRPFLTEVRAWEQKLSLIGECIEV 1605

Query: 200  WIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR 259
            W+ +QRKW+YLE       ++   S DIR   Q  A  K   +                 
Sbjct: 1606 WMHVQRKWMYLE-------SIFVGSDDIRH--QLPAEAKRFDNI---------------- 1640

Query: 260  ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPR 319
            +R W ++M  T                                             KN  
Sbjct: 1641 DRQWQKIMNDTA--------------------------------------------KNTV 1656

Query: 320  VIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPT 379
            V++ C+   RL+ L+ L + LE C+KSL +YL  KR AFPRF+FISDDELLSILG+S PT
Sbjct: 1657 VLDACMADGRLDLLKSLSEQLEVCQKSLSEYLDTKRCAFPRFYFISDDELLSILGTSDPT 1716

Query: 380  AIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVL 439
            ++QEH++K+FDN  +L        G KTI+ M+S E E  +FR      G +E WMT V 
Sbjct: 1717 SVQEHMLKLFDNCAALVFGR----GNKTITGMVSSEKEGFEFRNVVPIEGAVELWMTNVE 1772

Query: 440  DEM 442
             EM
Sbjct: 1773 AEM 1775

Source: Chlamydomonas reinhardtii

Species: Chlamydomonas reinhardtii

Genus: Chlamydomonas

Family: Chlamydomonadaceae

Order: Chlamydomonadales

Class: Chlorophyceae

Phylum: Chlorophyta

Superkingdom: Eukaryota

>gi|302843856|ref|XP_002953469.1| flagellar inner arm dynein 1 heavy chain alpha [Volvox carteri f. nagariensis] gi|300261228|gb|EFJ45442.1| flagellar inner arm dynein 1 heavy chain alpha [Volvox carteri f. nagariensis]

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 150/303 (49%), Gaps = 73/303 (24%)

Query: 140  VKKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYT 199
            +K  EDRG+ L    ++L+ LED  +NLQSM  S ++ PFL  V+ WE++LS++ E +  
Sbjct: 1541 MKGPEDRGWVLRSTEDILVLLEDMGLNLQSMMASPFVRPFLTEVRAWEQKLSLIGECIEV 1600

Query: 200  WIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR 259
            W+ +QRKW+YLE       ++   S DIR   Q  A  K   +                 
Sbjct: 1601 WMHVQRKWMYLE-------SIFVGSDDIRH--QLPAEAKRFDNI---------------- 1635

Query: 260  ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPR 319
            +R W + M  T                                K +V L           
Sbjct: 1636 DRQWQKTMNDTA-------------------------------KNTVVL----------- 1653

Query: 320  VIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPT 379
              + C+   RL+ L+ L + LE C+KSL +YL  KR AFPRFFFISDDELLSILG+S PT
Sbjct: 1654 --DACMADGRLDLLKSLSEQLEICQKSLSEYLDTKRCAFPRFFFISDDELLSILGTSDPT 1711

Query: 380  AIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVL 439
            ++QEH++K+FDN  +L        G KTI+ M+S E E  +FR      G +E WMT V 
Sbjct: 1712 SVQEHMLKLFDNCAALVFGR----GNKTITGMVSSEKEGFEFRNVVPIEGAVELWMTTVE 1767

Query: 440  DEM 442
             EM
Sbjct: 1768 AEM 1770

Source: Volvox carteri f. nagariensis

Species: Volvox carteri

Genus: Volvox

Family: Volvocaceae

Order: Chlamydomonadales

Class: Chlorophyceae

Phylum: Chlorophyta

Superkingdom: Eukaryota

>gi|194745138|ref|XP_001955049.1| GF18580 [Drosophila ananassae] gi|190628086|gb|EDV43610.1| GF18580 [Drosophila ananassae]

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/305 (36%), Positives = 154/305 (50%), Gaps = 78/305 (25%)

Query: 141  KKGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTW 200
            K  EDRG+ LG + E++  LED+ MNLQSM  S +IGPFL                    
Sbjct: 1965 KGTEDRGWVLGPVDEIMQILEDNAMNLQSMGASQFIGPFL-------------------- 2004

Query: 201  IQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHE-ALR 259
                             +TV RW                    ++++AL  E+  E  + 
Sbjct: 2005 -----------------ETVNRW--------------------ERTLALISEIIDEWLVV 2027

Query: 260  ERHWTELMKKTGVEDELKTVKRWSSDIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKN 317
            +R W  L    G+            DIR ++P+  +  +   K +++     IM +  KN
Sbjct: 2028 QRKWLYL---EGI--------FIGGDIRTQLPEEARKFDDIDKSYRR-----IMVDCAKN 2071

Query: 318  PRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSS 377
            P V+  C +P RL  ++ L  GLE C+KSL +YL  KR  FPRF+FIS DELLSILGSS 
Sbjct: 2072 PLVVPFCTIPGRLVEIQGLGIGLENCQKSLNEYLDSKRRIFPRFYFISTDELLSILGSSE 2131

Query: 378  PTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTR 437
            P+A+Q HI+KM+DN++SL++    S  +  ++AMIS E EVM+FR      G +E WM  
Sbjct: 2132 PSAVQNHIIKMYDNIKSLRLVKEGSQTL--VTAMISSEGEVMEFRRSARAAGRVEYWMND 2189

Query: 438  VLDEM 442
            VLDEM
Sbjct: 2190 VLDEM 2194

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	448
UNIPROTKB|Q8IVF4	4471	DNAH10 "Dynein heavy chain 10,	0.339	0.033	0.543	2.1e-55
ZFIN|ZDB-GENE-060531-163	3330	si:dkeyp-86b9.1 "si:dkeyp-86b9	0.339	0.045	0.531	3.5e-55
UNIPROTKB|J9JHE6	4028	DNAH10 "Uncharacterized protei	0.339	0.037	0.525	1e-53
UNIPROTKB|F1PMG2	4291	DNAH10 "Uncharacterized protei	0.339	0.035	0.525	1.2e-53
UNIPROTKB|E2RMJ8	4436	DNAH10 "Uncharacterized protei	0.339	0.034	0.525	1.3e-53
UNIPROTKB|F1LR86	3322	Dnah10 "Protein Dnah10" [Rattu	0.339	0.045	0.518	5.8e-53
FB|FBgn0013813	5080	Dhc98D "Dynein heavy chain at	0.339	0.029	0.496	6.9e-53
UNIPROTKB|F1NQP3	4033	F1NQP3 "Uncharacterized protei	0.294	0.032	0.556	1.5e-50
UNIPROTKB|F5H515	617	DNAH10 "Dynein heavy chain 10,	0.292	0.212	0.590	1.5e-36
UNIPROTKB|F1RFM8	4479	DNAH10 "Uncharacterized protei	0.522	0.052	0.387	1.3e-35

UNIPROTKB|Q8IVF4 DNAH10 "Dynein heavy chain 10, axonemal" [Homo sapiens (taxid:9606)]

 Score = 410 (149.4 bits), Expect = 2.1e-55, Sum P(2) = 2.1e-55
 Identities = 87/160 (54%), Positives = 109/160 (68%)

Query:   285 DIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEA 342
             DIR ++P+  K  +   K FK+     IM ET K+P +   C  PNRL  L+ + +GLE 
Sbjct:  1495 DIRSQLPEEAKKFDNIDKVFKR-----IMGETLKDPVIKRCCEAPNRLSDLQNVSEGLEK 1549

Query:   343 CEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSES 402
             C+KSL DYL  KRNAFPRFFFISDDELLSILGSS P  +QEH++KM+DN+ SL+  D +S
Sbjct:  1550 CQKSLNDYLDSKRNAFPRFFFISDDELLSILGSSDPLCVQEHMIKMYDNIASLRFNDGDS 1609

Query:   403 PGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              G K +SAMIS E EVM+FR      G +E WMT VL+EM
Sbjct:  1610 -GEKLVSAMISAEGEVMEFRKILRAEGRVEDWMTAVLNEM 1648

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0035085 "cilium axoneme" evidence=IEA

ZFIN|ZDB-GENE-060531-163 si:dkeyp-86b9.1 "si:dkeyp-86b9.1" [Danio rerio (taxid:7955)]

 Score = 404 (147.3 bits), Expect = 3.5e-55, Sum P(2) = 3.5e-55
 Identities = 85/160 (53%), Positives = 108/160 (67%)

Query:   285 DIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEA 342
             DIR ++P+  K  +   K FKK     IM +T K+P +   CLVPNRL  L+ L DGLE 
Sbjct:   349 DIRSQLPEEAKKFDNIDKTFKK-----IMTDTVKDPGIKRCCLVPNRLADLQNLSDGLER 403

Query:   343 CEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSES 402
             C+KSL DYL  KRNAFPRFFFISDDELLSILGSS PT +QEH++KM+DN+ +L+  D+  
Sbjct:   404 CQKSLNDYLDSKRNAFPRFFFISDDELLSILGSSEPTCVQEHMIKMYDNIAALRF-DTGM 462

Query:   403 PGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              G    +A++S E EVM+ + P    G +E WMT VL EM
Sbjct:   463 NGEMVANALVSAEGEVMELKQPVPAEGRVEDWMTAVLLEM 502

GO:0016887 "ATPase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

UNIPROTKB|J9JHE6 DNAH10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 397 (144.8 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
 Identities = 84/160 (52%), Positives = 108/160 (67%)

Query:   285 DIR-EMP-QCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEA 342
             DIR ++P + K  +   + FK+     IM ET K+P +   C  PNRL  L+ + +GLE 
Sbjct:  1052 DIRSQLPDEAKKFDNIDRIFKR-----IMGETLKDPVIKRCCEAPNRLADLQHISEGLEK 1106

Query:   343 CEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSES 402
             C+KSL DYL  KRNAFPRFFFISDDELLSILG+S P  +QEH++KM+DN+  L+  D E+
Sbjct:  1107 CQKSLNDYLDSKRNAFPRFFFISDDELLSILGNSDPLCVQEHMIKMYDNIALLRFNDGEN 1166

Query:   403 PGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              G K +SAMIS E EVM+FR      G +E WMT VL+EM
Sbjct:  1167 -GEKLVSAMISAEGEVMEFRKIIRAEGRVEDWMTAVLNEM 1205

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1PMG2 DNAH10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 397 (144.8 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
 Identities = 84/160 (52%), Positives = 108/160 (67%)

Query:   285 DIR-EMP-QCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEA 342
             DIR ++P + K  +   + FK+     IM ET K+P +   C  PNRL  L+ + +GLE 
Sbjct:  1315 DIRSQLPDEAKKFDNIDRIFKR-----IMGETLKDPVIKRCCEAPNRLADLQHISEGLEK 1369

Query:   343 CEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSES 402
             C+KSL DYL  KRNAFPRFFFISDDELLSILG+S P  +QEH++KM+DN+  L+  D E+
Sbjct:  1370 CQKSLNDYLDSKRNAFPRFFFISDDELLSILGNSDPLCVQEHMIKMYDNIALLRFNDGEN 1429

Query:   403 PGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              G K +SAMIS E EVM+FR      G +E WMT VL+EM
Sbjct:  1430 -GEKLVSAMISAEGEVMEFRKIIRAEGRVEDWMTAVLNEM 1468

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|E2RMJ8 DNAH10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 397 (144.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
 Identities = 84/160 (52%), Positives = 108/160 (67%)

Query:   285 DIR-EMP-QCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEA 342
             DIR ++P + K  +   + FK+     IM ET K+P +   C  PNRL  L+ + +GLE 
Sbjct:  1455 DIRSQLPDEAKKFDNIDRIFKR-----IMGETLKDPVIKRCCEAPNRLADLQHISEGLEK 1509

Query:   343 CEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSES 402
             C+KSL DYL  KRNAFPRFFFISDDELLSILG+S P  +QEH++KM+DN+  L+  D E+
Sbjct:  1510 CQKSLNDYLDSKRNAFPRFFFISDDELLSILGNSDPLCVQEHMIKMYDNIALLRFNDGEN 1569

Query:   403 PGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              G K +SAMIS E EVM+FR      G +E WMT VL+EM
Sbjct:  1570 -GEKLVSAMISAEGEVMEFRKIIRAEGRVEDWMTAVLNEM 1608

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1LR86 Dnah10 "Protein Dnah10" [Rattus norvegicus (taxid:10116)]

 Score = 388 (141.6 bits), Expect = 5.8e-53, Sum P(2) = 5.8e-53
 Identities = 83/160 (51%), Positives = 107/160 (66%)

Query:   285 DIR-EMPQ-CKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEA 342
             DIR ++P+  K  +   + FK+     IM +T K+P +   C  PNRL  L+ + +GLE 
Sbjct:   343 DIRSQLPEEAKKFDVIDRIFKR-----IMGDTLKDPVIKRCCEAPNRLHDLQTVSEGLEK 397

Query:   343 CEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSES 402
             C+KSL DYL  KRNAFPRFFFISDDELLSILG+S P  +QEH++KM+DN+  L+  D +S
Sbjct:   398 CQKSLNDYLDSKRNAFPRFFFISDDELLSILGNSDPLCVQEHMIKMYDNIAMLRFHDGDS 457

Query:   403 PGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              G K +SAMIS E EVM FR      G +E WMT VL+EM
Sbjct:   458 -GEKLVSAMISAEGEVMVFRKIVRAEGRVEDWMTTVLNEM 496

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

FB|FBgn0013813 Dhc98D "Dynein heavy chain at 89D" [Drosophila melanogaster (taxid:7227)]

 Score = 356 (130.4 bits), Expect = 6.9e-53, Sum P(3) = 6.9e-53
 Identities = 79/159 (49%), Positives = 104/159 (65%)

Query:   285 DIR-EMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEAC 343
             DIR ++P+ +A  K+  D  KS    IM +  KNP V+  C VP RL  ++ L  GLE C
Sbjct:  2037 DIRTQLPE-EA-RKF-DDIDKSYRR-IMVDCAKNPLVVPFCTVPGRLVEIQGLGIGLENC 2092

Query:   344 EKSLQDYLTDKRNAFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESP 403
             +KSL +YL  KR  FPRF+FIS DELLSILGSS P+A+Q HI+KM+DN++SL++    S 
Sbjct:  2093 QKSLNEYLDSKRRIFPRFYFISTDELLSILGSSEPSAVQNHIIKMYDNIKSLRLVKEGSQ 2152

Query:   404 GVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEM 442
              +  ++ MIS E EVM+FR      G +E WM  VLDEM
Sbjct:  2153 TI--VTGMISSEGEVMEFRHSARAAGRVEYWMNDVLDEM 2189

GO:0005875 "microtubule associated complex" evidence=ISS;NAS

GO:0003774 "motor activity" evidence=ISS

GO:0005858 "axonemal dynein complex" evidence=ISS

GO:0007018 "microtubule-based movement" evidence=IEA;ISS

GO:0042623 "ATPase activity, coupled" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1NQP3 F1NQP3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 379 (138.5 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
 Identities = 74/133 (55%), Positives = 92/133 (69%)

Query:   310 IMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDEL 369
             IM ET + P + + C  PNRL  L  + + LE C+KSL DYL  KRNAFPRFFFISD+EL
Sbjct:  1364 IMDETAEEPAIKKSCEAPNRLSDLHHINNVLEKCQKSLNDYLDSKRNAFPRFFFISDEEL 1423

Query:   370 LSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFG 429
             LSILGSS+P  +QEH++KM+DN+ SL+  D +    K ++AMIS E EVMDFR      G
Sbjct:  1424 LSILGSSNPLCVQEHMIKMYDNIASLRFQDGDGDK-KIVTAMISAEGEVMDFRQAVAAEG 1482

Query:   430 EIEQWMTRVLDEM 442
              +E WMT VL EM
Sbjct:  1483 RVENWMTAVLGEM 1495

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F5H515 DNAH10 "Dynein heavy chain 10, axonemal" [Homo sapiens (taxid:9606)]

 Score = 397 (144.8 bits), Expect = 1.5e-36, P = 1.5e-36
 Identities = 78/132 (59%), Positives = 95/132 (71%)

Query:   311 MWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELL 370
             M ET K+P +   C  PNRL  L+ + +GLE C+KSL DYL  KRNAFPRFFFISDDELL
Sbjct:     1 MGETLKDPVIKRCCEAPNRLSDLQNVSEGLEKCQKSLNDYLDSKRNAFPRFFFISDDELL 60

Query:   371 SILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGE 430
             SILGSS P  +QEH++KM+DN+ SL+  D +S G K +SAMIS E EVM+FR      G 
Sbjct:    61 SILGSSDPLCVQEHMIKMYDNIASLRFNDGDS-GEKLVSAMISAEGEVMEFRKILRAEGR 119

Query:   431 IEQWMTRVLDEM 442
             +E WMT VL+EM
Sbjct:   120 VEDWMTAVLNEM 131

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

UNIPROTKB|F1RFM8 DNAH10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 404 (147.3 bits), Expect = 1.3e-35, P = 1.3e-35
 Identities = 103/266 (38%), Positives = 149/266 (56%)

Query:   193 VSEVLYTWIQLQRKWL-YLEGVEDELKTVKRWSSDIREMPQCKALEKY-LKDFKKS--VA 248
             V E+L TW  ++   + Y +G++D    +      + ++ QC     + L+    S  V 
Sbjct:  1400 VKEILDTWENMKFTVVKYYKGIQDRGYIL----GSVDDIIQCLDDNTFNLQSISGSRFVG 1455

Query:   249 LFVELKHEALRERHWTELMKKTG--VEDELKTVKRW--------SSDIR-EMP-QCKALE 296
              F++  H+      W + +   G  +E  +   ++W          DIR ++P + K  +
Sbjct:  1456 PFLQTVHK------WEKTLSLIGEVIEIWMLVQRKWMYLESIFIGGDIRSQLPDEAKKFD 1509

Query:   297 KYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRN 356
                + FK+     IM ET K+P +   C  PNRL  L+ + +GLE C+KSL DYL  KRN
Sbjct:  1510 NIDRVFKR-----IMGETLKDPVIKRCCEAPNRLSDLQNISEGLEKCQKSLNDYLDSKRN 1564

Query:   357 AFPRFFFISDDELLSILGSSSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCEN 416
             AFPRFFFISDDELLSILG+S P  +QEH++KM+DN+  L+  D +S G K +SAMIS E 
Sbjct:  1565 AFPRFFFISDDELLSILGNSDPLCVQEHMIKMYDNIALLRFNDGDS-GEKLVSAMISAEG 1623

Query:   417 EVMDFRTPQLTFGEIEQWMTRVLDEM 442
             EVM+FR      G +E WMT VL+EM
Sbjct:  1624 EVMEFRKIIRAEGRVEDWMTAVLNEM 1649

GO:0005524 "ATP binding" evidence=IEA

GO:0030286 "dynein complex" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	448
pfam08393	408	pfam08393, DHC_N2, Dynein heavy chain, N-terminal	4e-65
pfam08393	408	pfam08393, DHC_N2, Dynein heavy chain, N-terminal	4e-11
pfam12774	231	pfam12774, AAA_6, Hydrolytic ATP binding site of d	1e-05

>gnl|CDD|219818 pfam08393, DHC_N2, Dynein heavy chain, N-terminal region 2

 Score =  214 bits (547), Expect = 4e-65
 Identities = 97/307 (31%), Positives = 144/307 (46%), Gaps = 76/307 (24%)

Query: 138 LVVKKGEDRGFQ-LGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEV 196
             +   +D G   L    E++  L+D+ + LQSM  S Y+ PF     EWEK+L+++ EV
Sbjct: 160 FELVPYKDTGTYLLKGWDEIIELLDDNLVTLQSMKASPYVKPFEEEADEWEKKLNLIQEV 219

Query: 197 LYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHE 256
           L  W+++QRKW+YLE +          SSDI+     K L +  K F             
Sbjct: 220 LELWLKVQRKWVYLEPIFS--------SSDIK-----KQLPEESKRFSNV---------- 256

Query: 257 ALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHK 316
              ++ W +LMKK                                             +K
Sbjct: 257 ---DKEWKKLMKK--------------------------------------------ANK 269

Query: 317 NPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSS 376
           +P V+E C +P  LE LE+L + LE  +KSL +YL  KR+AFPRF+F+S+D+LL IL  S
Sbjct: 270 DPNVLEVCNIPGLLEKLEKLNEQLEKIQKSLNEYLESKRSAFPRFYFLSNDDLLEILSQS 329

Query: 377 S-PTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWM 435
             PTA+Q H+ K+F+ + SL+  +        I+ MIS E E +    P    G +E W+
Sbjct: 330 KDPTAVQPHLKKLFEGISSLEFDEEN----NNITGMISSEGEEVPLSKPVSVEGNVEDWL 385

Query: 436 TRVLDEM 442
             +  EM
Sbjct: 386 NELEKEM 392

Dyneins are described as motor proteins of eukaryotic cells, as they can convert energy derived from the hydrolysis of ATP to force and movement along cytoskeletal polymers, such as microtubules. This region is found C-terminal to the dynein heavy chain N-terminal region 1 (pfam08385) in many members of this family. No functions seem to have been attributed specifically to this region. Length = 408

>gnl|CDD|219818 pfam08393, DHC_N2, Dynein heavy chain, N-terminal region 2

 Score = 64.1 bits (157), Expect = 4e-11
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 195 EVLYTWIQLQRKWLYL-----------EGVEDELKTVKRWSSDIREMPQCKALEKYLKDF 243
           ++   W +   +W                +E  LK +++   ++R+    + L+K + DF
Sbjct: 18  DLYSEWSESIEEWKNTPWSTIDPEELESEIEKFLKQLRKLPKNLRQYEVAEELKKKIDDF 77

Query: 244 KKSVALFVELKHEALRERHWTELMKKTGVED 274
           KKS+ L  +LK+ AL+ERHW ++ K  G +D
Sbjct: 78  KKSLPLIEDLKNPALKERHWEQIFKLLGFKD 108

Dyneins are described as motor proteins of eukaryotic cells, as they can convert energy derived from the hydrolysis of ATP to force and movement along cytoskeletal polymers, such as microtubules. This region is found C-terminal to the dynein heavy chain N-terminal region 1 (pfam08385) in many members of this family. No functions seem to have been attributed specifically to this region. Length = 408

>gnl|CDD|193250 pfam12774, AAA_6, Hydrolytic ATP binding site of dynein motor region D1

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 35 NCGEGMDFLAFGKILSGLSQCGAWGCFD 62
          NC E MD+ + G I  GL+Q GAWGCFD
Sbjct: 64 NCSEQMDYKSCGNIYKGLAQTGAWGCFD 91

the 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This particular family is the D1 unit of the motor and contains the hydrolytic ATP binding site. Length = 231

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	448
PF08393	408	DHC_N2: Dynein heavy chain, N-terminal region 2; I	100.0
COG5245	3164	DYN1 Dynein, heavy chain [Cytoskeleton]	98.34
PF12774	231	AAA_6: Hydrolytic ATP binding site of dynein motor	98.03
PF08393	408	DHC_N2: Dynein heavy chain, N-terminal region 2; I	97.31

>PF08393 DHC_N2: Dynein heavy chain, N-terminal region 2; InterPro: IPR013602 Dyneins are described as motor proteins of eukaryotic cells, as they can convert energy derived from the hydrolysis of ATP to force and movement along cytoskeletal polymers, such as microtubules

Probab=100.00  E-value=2.3e-61  Score=500.91  Aligned_cols=362  Identities=31%  Similarity=0.525  Sum_probs=278.1

Q ss_pred             eeeeeeEeeeehhcccccccCcceeeecccCCCccch--HHHHhHhcccccc-ccccccccccc-hhhHH--HHHHHhhc
Q psy17621          6 LRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDF--LAFGKILSGLSQC-GAWGCFDMMTA-NRYWT--KKAIYDFG   79 (448)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~e~~ey--~~f~k~~~~~~~~-~~W~~~d~~~s-~R~~~--~~ai~~~~   79 (448)
                      +.--|....-+...++.|..++|..++    .+.++-  ..+.+.+..+.+. ..|.+++.+.. +....  -..+.++.
T Consensus        13 ~~~lW~~~~~~~~~~~~w~~~~~~~ld----~~~l~~~v~~~~~~l~~l~~~~~~~~v~~~l~~~i~~f~~~lpli~~L~   88 (408)
T PF08393_consen   13 LKKLWSLISEWQEQLEEWMNTPFSDLD----VEELEEEVEEFLKQLRKLPKSLREWPVYKELKKKIEEFKKYLPLIQDLR   88 (408)
T ss_dssp             --------------HHHHHH--TTT---------------------------------HHHHHHHHHHHHHHTHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHcCChhhcC----HHHHHHHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHhcHHHHHhc
Confidence            445577777888899999999999996    555543  4455555544443 45777666632 32221  13347889


Q ss_pred             CCCCCccccc--cccc-----------hhhhhhcccchhHHHHHHHHHHHHccchHHHHHHHHHhcchhhhhhhc--ccc
Q psy17621         80 KTSKPRTEWM--LDNI-----------GMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVK--KGE  144 (448)
Q Consensus        80 ~~~~~r~~Wi--l~~~-----------~q~~L~~~qi~wt~EVe~i~~~I~Ag~E~alke~lkk~~~ql~~l~fk--~~~  144 (448)
                      +|+++.|||-  ++-.           .+.++..+...+.++|++++..  |.+|.++++.++++...|..+.|.  +++
T Consensus        89 ~~~mk~rHW~~l~~~~g~~~~~~~~~tL~~Ll~~~l~~~~~~I~~I~~~--A~~E~~ie~~L~~i~~~W~~~~f~~~~~~  166 (408)
T PF08393_consen   89 NPAMKPRHWKQLFQILGIQDFPNESLTLQDLLDLGLLDHEDKIEEISEQ--AQKEYKIEQSLEKIKEEWKNMEFEFVPYK  166 (408)
T ss_dssp             STT--CHHHHHHHHCTT-----TTS-SHHHHHHS-CCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCC-B-EEEEET
T ss_pred             CccchHHHHHHHHHHhcccccccccccHHHHHHhhhhhhHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHhceeeeeccc
Confidence            9999999992  2222           3455555566788899999876  899999999999999999987774  444


Q ss_pred             cc-ccccCCHHHHHHHHHHHHHHHhhhhcCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhc
Q psy17621        145 DR-GFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRW  223 (448)
Q Consensus       145 ~~-~~~l~~~~el~~~led~~~~L~~m~~S~~~~~f~~~i~~w~~kL~~~~~il~~w~~vQ~~W~~Le~if~~~~~~~~~  223 (448)
                      ++ .++|++++++++.|+||++.|++|++|||+++|+.+|.+|+++|..+.++|+.|.+||++|+||+|||        .
T Consensus       167 ~~~~~il~~~~~i~~~led~~~~L~~m~~S~~~~~~~~~v~~w~~~L~~~~~il~~w~~~Q~~W~yL~~if--------~  238 (408)
T PF08393_consen  167 DKDVFILKNWDEIIQQLEDHLLTLQSMKSSPFVKPFRDEVEEWEKKLNNIQEILEEWMEVQRKWMYLEPIF--------S  238 (408)
T ss_dssp             TT-CEEEE-CHHHHHHHHHHHHHHHHTCSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------T
T ss_pred             cchhheecchHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c
Confidence            44 58999999999999999999999999999999999999999999999999999999999999999999        6


Q ss_pred             chhhhcchhhHHHHHHHHHhhhhHHHHHhhhhHHHHhhhHHHHHHhhccccchhhhhccccccccchhhhHHHHHHHhhh
Q psy17621        224 SSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFK  303 (448)
Q Consensus       224 ~~di~~~~~~~~~~~~~~~~~~~~~~~~~Lp~e~~~~r~w~~l~~~F~~~~~~~~~~~~~~~I~~~~~~~~le~~~~~f~  303 (448)
                      ++||+++                      ||.|+          ++|             ..|+            +.|+
T Consensus       239 ~~di~~~----------------------lp~e~----------~~F-------------~~i~------------~~~~  261 (408)
T PF08393_consen  239 SSDIKKQ----------------------LPKEA----------KKF-------------SSID------------KEWR  261 (408)
T ss_dssp             SCCHCCC----------------------THHHH----------HHH-------------HHHH------------HHHH
T ss_pred             chhHHHH----------------------HHHHH----------HHH-------------HHcC------------hHHH
Confidence            6799999                      99999          999             9999            9999


Q ss_pred             hhhHHHHHHHhccCCceeeecccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCeeEecCcHHHHHHhcC-CChhHHH
Q psy17621        304 KSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGS-SSPTAIQ  382 (448)
Q Consensus       304 ~~~~~~im~~~~~~p~v~~~~~~~~~~~~L~~~~~~L~~i~k~L~~yLe~kR~~FPRFyFlSd~eLL~ils~-~~p~~i~  382 (448)
                      .     +|..+.++|+|+++|..|++.+.|..+++.|+.|+|+|++|||+||..|||||||||+|||+|||+ +||..++
T Consensus       262 ~-----i~~~~~~~~~v~~~~~~~~~~~~l~~~~~~l~~i~k~L~~~Le~kR~~FPRfyFlsd~eLl~ils~~~~~~~i~  336 (408)
T PF08393_consen  262 S-----IMKRAQKDPNVLSVCSNPDLLEKLESINESLEKIQKSLNDYLESKREAFPRFYFLSDDELLEILSQSKDPEQIQ  336 (408)
T ss_dssp             H-----HHHHHHCT-CCHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHC-HHHHHHHHHTTTTCHHHH
T ss_pred             H-----HHHHHHhCcchhHHhhHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccceeecCcHHHHHHHHcCCChHHHH
Confidence            9     999999999999999999999999999999999999999999999999999999999999999997 6999999


Q ss_pred             HHHHhhhhcccceeecccCCCCccEEEEEeeCCCCEEEccCCccCCCCHHHHHHHHHHHHHHhcC
Q psy17621        383 EHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFGEIEQWMTRVLDEMMTGSP  447 (448)
Q Consensus       383 ~~l~klF~~I~~l~~~~~~~~~~~~I~g~~S~eGE~v~~~~~v~~~g~ve~WL~~le~~mr~tl~  447 (448)
                      +|++||||||++|.|++++    ..|+||+|++||+|+|.+||.+.|+||.||++||++|+.||+
T Consensus       337 ~~l~k~F~~i~~l~~~~~~----~~i~~~~s~~gE~~~l~~~v~~~~~ve~WL~~le~~m~~tl~  397 (408)
T PF08393_consen  337 PHLKKCFPGIKSLEFDENN----NSITGMISAEGETLPLDKPVSIEGPVEEWLNELEEEMKSTLK  397 (408)
T ss_dssp             HHHHHCCSSEEEEEE-TTS----SEEEEEEETTS-EEEEEEEEESSS-HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccch----hhhhhhcCCCCCeEEeCCcccCCCcHHHHHHHHHHHHHHHHH
Confidence            9999999999999998754    369999999999999999999999999999999999999986

Dyneins generally contain one to three heavy chains, where each heavy chain consists of a C-terminal globular head, a flexible microtubule-binding stalk, and a flexible N-terminal tail known as the cargo-binding domain []. The two categories of dyneins are the axonemal dyneins, which produce the bending motions that propagate along cilia and flagella, and the cytosolic dyneins, which drive a variety of fundamental cellular processes including nuclear migration, organisation of the mitotic spindle, chromosome separation during mitosis, and the positioning and function of many intracellular organelles. Cytoplasmic dyneins contain several accessory subunits ranging from light to intermediate chains. This entry represents a region found C-terminal to the dynein heavy chain N-terminal region 1 (IPR013594 from INTERPRO) in many members of this family. No functions seem to have been attributed specifically to this region. ; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.

>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton]

Probab=98.34  E-value=7.2e-07  Score=102.13  Aligned_cols=194  Identities=10%  Similarity=-0.003  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHhhhhcCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhcchhhhcchhhHHH
Q psy17621        157 LLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKAL  236 (448)
Q Consensus       157 ~~~led~~~~L~~m~~S~~~~~f~~~i~~w~~kL~~~~~il~~w~~vQ~~W~~Le~if~~~~~~~~~~~di~~~~~~~~~  236 (448)
                      -+-|.+.+..+-.|..+-|   |+.. .+.+.+|...+.+--      -.|+.++.+..       ...|++..      
T Consensus       587 rewc~~~l~~~~~~~~a~~---~e~~-~d~~~~l~~~s~~~v------~~~ld~y~~~~-------~~~dl~~~------  643 (3164)
T COG5245         587 REWCSSVLSDDFLEERAVR---VERG-ADGARRLRASSGSPV------LRRLDEYLMMM-------SLEDLMPL------  643 (3164)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHcC-ccHHHHHHhccCCcH------HHHHHHHHHHh-------hhhhhccc------
Confidence            3334444444444444444   2322 334444444433211      45777777774       34577666      


Q ss_pred             HHHHHHhhhhHHHHHhhhhHHHHhhhHHHHHHhhccccchhhhhccccccccchhhhHHHHHHHhhhhhhHHHHHHHhcc
Q psy17621        237 EKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHK  316 (448)
Q Consensus       237 ~~~~~~~~~~~~~~~~Lp~e~~~~r~w~~l~~~F~~~~~~~~~~~~~~~I~~~~~~~~le~~~~~f~~~~~~~im~~~~~  316 (448)
                                      +|++.          .+|             ..+.            ..++.     |.+++..
T Consensus       644 ----------------ip~~~----------~~~-------------~sl~------------s~~~~-----i~~r~~~  667 (3164)
T COG5245         644 ----------------IPHAV----------HRK-------------MSLV------------SGVRG-----IYKRVVS  667 (3164)
T ss_pred             ----------------ccHHH----------HHH-------------HHHH------------hhhhh-----hhhhhhc
Confidence                            99999          888             6666            77887     8888776


Q ss_pred             CCceeeecccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCeeEecCcHHHHHHhcC-CChhHHHHHHHhhhhcccce
Q psy17621        317 NPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGS-SSPTAIQEHIVKMFDNVQSL  395 (448)
Q Consensus       317 ~p~v~~~~~~~~~~~~L~~~~~~L~~i~k~L~~yLe~kR~~FPRFyFlSd~eLL~ils~-~~p~~i~~~l~klF~~I~~l  395 (448)
                      -...++....|+. ..|.-..+.++.+..++..+|+.+|..|||  |+.++||+++++. .|...+.+++.|+|..+...
T Consensus       668 ~~~~i~~i~~~~~-d~l~l~~~~~~~v~~si~~~l~~~~r~~~r--~~~~~~l~~~v~~~~~~~~~~~f~~k~~~~~e~~  744 (3164)
T COG5245         668 GCEAINTILEDVG-DDLDLFYKEMDQVFMSIEKVLGLRWREVER--ASEVEELMDRVRELENRVYSYRFFVKKIAKEEMK  744 (3164)
T ss_pred             ccchhheeeccCC-chHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hcchHHHHHHHhcccchHHHHHHHHHHHhhHHHH
Confidence            6666666666653 348778899999999999999999999999  8999999999997 78888999999999999888


Q ss_pred             eecccCCCCccEEEEEeeCCCCEEEccCCccCCC--CHHHHHHHH
Q psy17621        396 KMADSESPGVKTISAMISCENEVMDFRTPQLTFG--EIEQWMTRV  438 (448)
Q Consensus       396 ~~~~~~~~~~~~I~g~~S~eGE~v~~~~~v~~~g--~ve~WL~~l  438 (448)
                      .|-.+      .|+|+-+-+||...+..-+.+..  .+..|+++-
T Consensus       745 ~~~~~------~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~in~s  783 (3164)
T COG5245         745 TVFSS------RIQKKEPFSLDSEAYVGFFRLYEKSIVIRGINRS  783 (3164)
T ss_pred             HHHHH------HhccCCCccchHHhhhhhhhhHHHHHHHHHhhhH
Confidence            77653      59999999999988888777653  566788843

>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A

Probab=98.03  E-value=8.4e-07  Score=86.13  Aligned_cols=52  Identities=33%  Similarity=0.532  Sum_probs=44.6

Q ss_pred             ehhcccccccCcceeeecccCCCccchHHHHhHhccccccccccccccccch
Q psy17621         16 KLTCSTTYKVSKWQTASRPNCGEGMDFLAFGKILSGLSQCGAWGCFDMMTAN   67 (448)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~n~~e~~ey~~f~k~~~~~~~~~~W~~~d~~~s~   67 (448)
                      +.++|++.....++.++||||+++|||..+++++.|+.+.|+|+|||+|+.+
T Consensus        45 Ktetik~La~~lG~~~~vfnc~~~~~~~~l~ril~G~~~~GaW~cfdefnrl   96 (231)
T PF12774_consen   45 KTETIKDLARALGRFVVVFNCSEQMDYQSLSRILKGLAQSGAWLCFDEFNRL   96 (231)
T ss_dssp             HHHHHHHHHHCTT--EEEEETTSSS-HHHHHHHHHHHHHHT-EEEEETCCCS
T ss_pred             chhHHHHHHHHhCCeEEEecccccccHHHHHHHHHHHhhcCchhhhhhhhhh
Confidence            4678999999999999999999999999999999999999999999999653

>PF08393 DHC_N2: Dynein heavy chain, N-terminal region 2; InterPro: IPR013602 Dyneins are described as motor proteins of eukaryotic cells, as they can convert energy derived from the hydrolysis of ATP to force and movement along cytoskeletal polymers, such as microtubules

Probab=97.31  E-value=0.0013  Score=68.70  Aligned_cols=122  Identities=23%  Similarity=0.415  Sum_probs=80.0

Q ss_pred             cchhhHHHHHHHHHhhhhHHHHHhhhhHHHHhhhHHHHHHhhc-c---ccchhhhhcccccccc----------chh-hh
Q psy17621        229 EMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTG-V---EDELKTVKRWSSDIRE----------MPQ-CK  293 (448)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~Lp~e~~~~r~w~~l~~~F~-~---~~~~~~~~~~~~~I~~----------~~~-~~  293 (448)
                      ..+++..++..++.|+..++++..|.++++++|||+++.+..| .   +..+|++..+..++.+          .|+ |.
T Consensus        63 ~~~v~~~l~~~i~~f~~~lpli~~L~~~~mk~rHW~~l~~~~g~~~~~~~~~tL~~Ll~~~l~~~~~~I~~I~~~A~~E~  142 (408)
T PF08393_consen   63 EWPVYKELKKKIEEFKKYLPLIQDLRNPAMKPRHWKQLFQILGIQDFPNESLTLQDLLDLGLLDHEDKIEEISEQAQKEY  142 (408)
T ss_dssp             ----HHHHHHHHHHHHHHTHHHHHTTSTT--CHHHHHHHHCTT-----TTS-SHHHHHHS-CCCCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcHHHHHhcCccchHHHHHHHHHHhcccccccccccHHHHHHhhhhhhHHHHHHHHHHHhHHH
Confidence            3456677888899999999999999999999999999999998 2   3467777766655533          144 55


Q ss_pred             HHHHHHHhhhhhhH------------------------------HHHHHHhccCCceeeecccccHHHHHHHHHHHHHHH
Q psy17621        294 ALEKYLKDFKKSVA------------------------------LFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEAC  343 (448)
Q Consensus       294 ~le~~~~~f~~~~~------------------------------~~im~~~~~~p~v~~~~~~~~~~~~L~~~~~~L~~i  343 (448)
                      ++|..+++.+..|.                              +..+..+..+|.+      ..+......+...|..+
T Consensus       143 ~ie~~L~~i~~~W~~~~f~~~~~~~~~~~il~~~~~i~~~led~~~~L~~m~~S~~~------~~~~~~v~~w~~~L~~~  216 (408)
T PF08393_consen  143 KIEQSLEKIKEEWKNMEFEFVPYKDKDVFILKNWDEIIQQLEDHLLTLQSMKSSPFV------KPFRDEVEEWEKKLNNI  216 (408)
T ss_dssp             HHHHHHHHHHHHHCC-B-EEEEETTT-CEEEE-CHHHHHHHHHHHHHHHHTCSSTTT------TCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhceeeeeccccchhheecchHHHHHHHHHHHHHHhcccccchh------HHHHHHHHHHHHHHHHH
Confidence            66665544444222                              1112222222221      24667788899999999


Q ss_pred             HHHHHHHHHhhcc
Q psy17621        344 EKSLQDYLTDKRN  356 (448)
Q Consensus       344 ~k~L~~yLe~kR~  356 (448)
                      +..|..+.+-+|.
T Consensus       217 ~~il~~w~~~Q~~  229 (408)
T PF08393_consen  217 QEILEEWMEVQRK  229 (408)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999997

Dyneins generally contain one to three heavy chains, where each heavy chain consists of a C-terminal globular head, a flexible microtubule-binding stalk, and a flexible N-terminal tail known as the cargo-binding domain []. The two categories of dyneins are the axonemal dyneins, which produce the bending motions that propagate along cilia and flagella, and the cytosolic dyneins, which drive a variety of fundamental cellular processes including nuclear migration, organisation of the mitotic spindle, chromosome separation during mitosis, and the positioning and function of many intracellular organelles. Cytoplasmic dyneins contain several accessory subunits ranging from light to intermediate chains. This entry represents a region found C-terminal to the dynein heavy chain N-terminal region 1 (IPR013594 from INTERPRO) in many members of this family. No functions seem to have been attributed specifically to this region. ; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	448
3vkg_A	3245	X-Ray Structure Of An Mtbd Truncation Mutant Of Dyn		2e-13
3vkh_A	3367	X-Ray Structure Of A Functional Full-Length Dynein		2e-13
4ai6_A	2695	Dynein Motor Domain - Adp Complex Length = 2695		1e-07
3qmz_A	2486	Crystal Structure Of The Cytoplasmic Dynein Heavy C		1e-07

>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain Length = 3245

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 318 PRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSS 377
           P ++E   +    + +E+L D L   +K+L +YL  +R+AF RF+F+ D++LL I+G+S 
Sbjct: 291 PLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSK 350
Query: 378 P-TAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTP-QLTFG-EIEQW 434
               IQ+H  KMF  + +L + D ++    TI  M S E E + F+ P  +  G +I +W
Sbjct: 351 DIIKIQKHFRKMFAGLANLTLDDEKT----TIIGMSSAEGETVTFKKPISIANGPKIHEW 406
Query: 435 MTRVLDEM 442
           +T V  EM
Sbjct: 407 LTMVESEM 414

>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor Domain Length = 3367

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 318 PRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSS 377
           P ++E   +    + +E+L D L   +K+L +YL  +R+AF RF+F+ D++LL I+G+S 
Sbjct: 291 PLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSK 350
Query: 378 P-TAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTP-QLTFG-EIEQW 434
               IQ+H  KMF  + +L + D ++    TI  M S E E + F+ P  +  G +I +W
Sbjct: 351 DIIKIQKHFRKMFAGLANLTLDDEKT----TIIGMSSAEGETVTFKKPISIANGPKIHEW 406
Query: 435 MTRVLDEM 442
           +T V  EM
Sbjct: 407 LTMVESEM 414

>pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 321 IEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSS-SPT 379
           IE   +PN    L+   D L+  + SL  +L  +R  FPRF+F+ +D+LL I+GS     
Sbjct: 353 IEVIHIPNFDTTLKLTIDSLKMIKSSLSTFLERQRRQFPRFYFLGNDDLLKIIGSGKHHD 412
Query: 380 AIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFR 422
            + + + KMF +++S+   +    GV+++   +   NE ++ +
Sbjct: 413 QVSKFMKKMFGSIESIIFLEDFITGVRSVEGEVLNLNEKIELK 455

>pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 321 IEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSS-SPT 379
           IE   +PN    L+   D L+  + SL  +L  +R  FPRF+F+ +D+LL I+GS     
Sbjct: 134 IEVIHIPNFDTTLKLTIDSLKMIKSSLSTFLERQRRQFPRFYFLGNDDLLKIIGSGKHHD 193
Query: 380 AIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFR 422
            + + + KMF +++S+   +    GV+++   +   NE ++ +
Sbjct: 194 QVSKFMKKMFGSIESIIFFEDFITGVRSVEGEVLNLNEKIELK 236

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	448
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	1e-62
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	6e-10
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	5e-08
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	2e-07
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	2e-62
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	3e-11
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	1e-09
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score =  219 bits (559), Expect = 1e-62
 Identities = 54/306 (17%), Positives = 104/306 (33%), Gaps = 86/306 (28%)

Query: 144 EDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQL 203
                 + +   +    ++    L SM  S Y   F     + E +L+ +SE+   W+++
Sbjct: 245 SSGLKLVREWDVLEQACKEDLEELVSMKASNYYKIFEQDCLDLESKLTKLSEIQVNWVEV 304

Query: 204 QRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR---- 259
           Q  WL L G+  E       + DI+                        L  E  +    
Sbjct: 305 QFYWLDLYGILGE-------NLDIQN----------------------FLPLETSKFKSL 335

Query: 260 ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPR 319
              +  +  +                                              +   
Sbjct: 336 TSEYKMITTR--------------------------------------------AFQLDT 351

Query: 320 VIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSS-P 378
            IE   +PN    L+   D L+  + SL  +L  +R  FPRF+F+ +D+LL I+GS    
Sbjct: 352 TIEVIHIPNFDTTLKLTIDSLKMIKSSLSTFLERQRRQFPRFYFLGNDDLLKIIGSGKHH 411

Query: 379 TAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFG--EIEQWMT 436
             + + + KMF +++S+   +        I+ + S E EV++           + ++W+ 
Sbjct: 412 DQVSKFMKKMFGSIESIIFLE------DFITGVRSVEGEVLNLNEKIELKDSIQAQEWLN 465

Query: 437 RVLDEM 442
            +  E+
Sbjct: 466 ILDTEI 471

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score = 60.6 bits (147), Expect = 6e-10
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 35  NCGEGMDFLAFGKILSGLSQCGAWGCFD 62
           NC +  D+    ++L G++Q GAWGCFD
Sbjct: 677 NCDDSFDYQVLSRLLVGITQIGAWGCFD 704

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score = 54.5 bits (131), Expect = 5e-08
 Identities = 12/101 (11%), Positives = 29/101 (28%), Gaps = 7/101 (6%)

Query: 180 LPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDEL-------KTVKRWSSDIREMPQ 232
            P +  +      +++ +     +  K   L G   E          V      +  +  
Sbjct: 51  FPNLPYYIDGDVKLTQSMAIIRYIADKHNMLGGCPKERAEISMLEGAVLDIRYGVSRIAY 110

Query: 233 CKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVE 273
            K  E    DF   +   +++  + L  + +      T  +
Sbjct: 111 SKDFETLKVDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPD 151

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 7/83 (8%)

Query: 63  MMTANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRAGNDR 122
           +  +     +  +    K        +   I   +L +  V WT  VE            
Sbjct: 471 IKLSVFTQFRDCLGQI-KDGTDIEVVVSKYIFQAILLSAQVMWTELVEKCLQT------N 523

Query: 123 AMKDYLGAQNAQLDALVVKKGED 145
               Y    + ++  L+ K  + 
Sbjct: 524 QFSKYWKEVDMKIKGLLDKLNKS 546

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score =  218 bits (556), Expect = 2e-62
 Identities = 71/306 (23%), Positives = 120/306 (39%), Gaps = 84/306 (27%)

Query: 144 EDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQL 203
           + +   +    ++  +L +   ++ +M  S Y   F      W+ RL+ V  +L  WI +
Sbjct: 186 QRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDV 245

Query: 204 QRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALR---- 259
           QR+W+YLEG       +   S DI +                       L  E+ R    
Sbjct: 246 QRRWVYLEG-------IFSGSGDINQ----------------------LLPAESTRFKSI 276

Query: 260 ERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPR 319
              +  ++KK                                                P 
Sbjct: 277 NSEFIAILKK--------------------------------------------VSGAPL 292

Query: 320 VIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGSSS-P 378
           ++E   +    + +E+L D L   +K+L +YL  +R+AF RF+F+ D++LL I+G+S   
Sbjct: 293 ILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDI 352

Query: 379 TAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLT--FGEIEQWMT 436
             IQ+H  KMF  + +L + D +     TI  M S E E + F+ P       +I +W+T
Sbjct: 353 IKIQKHFRKMFAGLANLTLDDEK----TTIIGMSSAEGETVTFKKPISIANGPKIHEWLT 408

Query: 437 RVLDEM 442
            V  EM
Sbjct: 409 MVESEM 414

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 64.9 bits (158), Expect = 3e-11
 Identities = 10/84 (11%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 63  MMTANRYWTKKAIYDFGKT----SKPRTEWMLDNIGMTVLAANGVWWTAEVENVFSKIRA 118
           M +       +++  F +         +EW+ +     VL  + + W+ +V+        
Sbjct: 414 MKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALGGGTL 473

Query: 119 GNDR---AMKDYLGAQNAQLDALV 139
              +    ++         L+ L 
Sbjct: 474 QQSKIQEQLQSIEQTTQMILNNLA 497

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 17/28 (60%), Positives = 18/28 (64%)

Query: 35  NCGEGMDFLAFGKILSGLSQCGAWGCFD 62
            C EG D  A  +I  GL QCGAWGCFD
Sbjct: 636 CCDEGFDLQAMSRIFVGLCQCGAWGCFD 663

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245

 Score = 58.8 bits (142), Expect = 3e-09
 Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 183 VQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKD 242
           +    + +  + E    W  +  + +  + +ED L+ +K   + IR+       +  +K 
Sbjct: 41  LSNTWQEIDSLKETA--WSAIIPRKV-RKSLEDTLQKLKNLPNRIRQYSAFDHAQNLIKI 97

Query: 243 FKKSVALFVELKHEALRERHWTELMKKTGVE 273
           + K  A+  +L  EA+++RHW  L K+    
Sbjct: 98  YLKGNAIITDLHSEAIKDRHWKILKKRLNTN 128

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 8e-10
 Identities = 71/453 (15%), Positives = 131/453 (28%), Gaps = 140/453 (30%)

Query: 40  MDF------LAFGKILSGLSQ--CGAWGCFDMMTANRYWTKKAIYDFGKTSKPRTE---- 87
           MDF        +  ILS         + C D+    +    K   D    SK        
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 88  --WMLDNIGM--------TVLAANGVWWTAEVENVFSKIRA-GNDRAM--KDYLGAQN-A 133
             W L +            VL  N  +       + S I+      +M  + Y+  ++  
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKF-------LMSPIKTEQRQPSMMTRMYIEQRDRL 119

Query: 134 QLDALVVKKGE-DRGFQLGDLSEMLLQLEDSC-MNLQSMAGSAYIGPFLPVVQEWEKRLS 191
             D  V  K    R      L + LL+L  +  + +  + GS   G          K  +
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS---G----------K--T 164

Query: 192 V-VSEVLYTWIQLQRK------WLYLEGVEDELKTVKRWSS--DIREMPQ--CKALEKYL 240
               +V  +  ++Q K      WL           +K  +S   + EM Q     ++   
Sbjct: 165 WVALDVCLS-YKVQCKMDFKIFWL----------NLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 241 K---DFKKSVALFVELKHEALRERHWTELMKKTG--VEDELKTVKRWSS-DIREMPQCKA 294
               D   ++ L +      LR R       +    V   ++  K W++ ++     CK 
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELR-RLLKSKPYENCLLVLLNVQNAKAWNAFNL----SCKI 268

Query: 295 L----------------------EKYLKDF--KKSVALFIMW----------ETHK-NPR 319
           L                      + +       +  +L + +          E    NPR
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 320 VIEQCLV-------PNRLEH-----LEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDD 367
            +   ++           ++      ++L   +E+    L+    + R  F R       
Sbjct: 329 RL--SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA--EYRKMFDRLSVFPPS 384

Query: 368 -----ELLSILGSSSPTAIQEHIVKMFDNVQSL 395
                 LLS++      +    +V       SL
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHK-YSL 416

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 1e-09
 Identities = 47/307 (15%), Positives = 101/307 (32%), Gaps = 104/307 (33%)

Query: 233 CKALEKYLKDF--KKSVALFVELKHEALRERH--WTELMKKTG-----VEDELKTVKRW- 282
           CK ++   K    K+ +   +  K          WT L K+       VE+ L+   ++ 
Sbjct: 35  CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 283 SSDIREMPQCKAL--EKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGL 340
            S I+   +  ++    Y++   +          + + +V  +  V  RL+   +L+  L
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDR---------LYNDNQVFAKYNVS-RLQPYLKLRQAL 144

Query: 341 EA--------------CEKS------LQDYLTDKRNAFPRFFFIS------DDELLSIL- 373
                             K+         Y    +  F + F+++       + +L +L 
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF-KIFWLNLKNCNSPETVLEMLQ 203

Query: 374 ---------------GSSSPT----AIQEHIVKMF------------DNVQSLKMADSES 402
                           SS+      +IQ  + ++              NVQ+ K  ++ +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263

Query: 403 PGVKTISAMISCENEVMDFRTPQ-------------LTFGEIEQWMTRVLD--------E 441
              K +  + +   +V DF +               LT  E++  + + LD        E
Sbjct: 264 LSCKIL--LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 442 MMTGSPL 448
           ++T +P 
Sbjct: 322 VLTTNPR 328

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	448
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	100.0
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	100.0
3vkg_A	3245	Dynein heavy chain, cytoplasmic; AAA+ protein, mol	97.6
4akg_A	2695	Glutathione S-transferase class-MU 26 kDa isozyme	97.06

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*

Probab=100.00  E-value=1.7e-59  Score=569.45  Aligned_cols=365  Identities=24%  Similarity=0.386  Sum_probs=294.5

Q ss_pred             ceeeeeeeEeeeehhcccccccCcceeeecccCCCccch--HHHHhHhcccccc-ccccccccc-cchhhHHH--HHHHh
Q psy17621          4 RRLRINFYFSYLKLTCSTTYKVSKWQTASRPNCGEGMDF--LAFGKILSGLSQC-GAWGCFDMM-TANRYWTK--KAIYD   77 (448)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~e~~ey--~~f~k~~~~~~~~-~~W~~~d~~-~s~R~~~~--~ai~~   77 (448)
                      ..++--|.....+.+.+++|+.++|..++    .+.++-  ..|.+.++.+.+. +.|.+++.+ +.++....  ..+.+
T Consensus        32 ~~l~~~w~~~~~~~~~~~~~~~~~w~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~i~~f~~~lpll~~  107 (3245)
T 3vkg_A           32 QDLKAVWVELSNTWQEIDSLKETAWSAII----PRKVRKSLEDTLQKLKNLPNRIRQYSAFDHAQNLIKIYLKGNAIITD  107 (3245)
T ss_dssp             ---------------CHHHHHHCCTTTCC----C-------------------------CHHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChhhcC----HHHHHHHHHHHHHHHHhCcchhhhhHHHHHHHHHHHHHHHHhHHHHH
Confidence            34566799999999999999999999996    777754  6677888887766 789888766 33443321  34578


Q ss_pred             hcCCCCCccccc--c----------ccchhhhhhcccchhHHHHHHHHHHHHccchHHHHHHHHHhcchhhhhhhc--cc
Q psy17621         78 FGKTSKPRTEWM--L----------DNIGMTVLAANGVWWTAEVENVFSKIRAGNDRAMKDYLGAQNAQLDALVVK--KG  143 (448)
Q Consensus        78 ~~~~~~~r~~Wi--l----------~~~~q~~L~~~qi~wt~EVe~i~~~I~Ag~E~alke~lkk~~~ql~~l~fk--~~  143 (448)
                      +.+|+++.|||-  +          +.+...++..+...+.++|++|...  |.+|.++|+.++++...|+.+.|.  .+
T Consensus       108 L~n~~~~~RHW~~l~~~~g~~~~~~~~tL~~ll~~~l~~~~~~i~~I~~~--A~~E~~iE~~L~~i~~~W~~~~f~~~~~  185 (3245)
T 3vkg_A          108 LHSEAIKDRHWKILKKRLNTNWIITELTLGSIWDSDLARNENIYREVITA--AQGEIALEEFLKGVREFWTTLELDLVNY  185 (3245)
T ss_dssp             TTSTTCCHHHHHHHHHHTTCCCCTTSCCHHHHHHSCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCBCEEEEE
T ss_pred             hCCccccHHHHHHHHHHhCCCCCccCCCHHHHHhccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhceEEEEEec
Confidence            999999999993  1          2234667778888889999999876  899999999999999999987774  45


Q ss_pred             cccccccCCHHHHHHHHHHHHHHHhhhhcCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhc
Q psy17621        144 EDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSEVLYTWIQLQRKWLYLEGVEDELKTVKRW  223 (448)
Q Consensus       144 ~~~~~~l~~~~el~~~led~~~~L~~m~~S~~~~~f~~~i~~w~~kL~~~~~il~~w~~vQ~~W~~Le~if~~~~~~~~~  223 (448)
                      ++++++|+++++|++.|+||++.|++|++|||+++|+++|.+|+++|+.++++|+.|.+||++|+||++||.       .
T Consensus       186 ~~~~~ll~~~dei~~~led~~~~l~sm~~S~~~~~f~~~v~~We~~L~~~~~il~~W~~vQ~~W~yLe~IF~-------~  258 (3245)
T 3vkg_A          186 QRKCKLVRGWDDLFNKLAEHLNSISAMKMSPYYKVFEEEANHWDDRLNKVRSLLDVWIDVQRRWVYLEGIFS-------G  258 (3245)
T ss_dssp             TTTEEEEECHHHHHHHHHHHHHHHHHTTSSTTTTGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred             cCCeeEeCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------C
Confidence            566789999999999999999999999999999999999999999999999999999999999999999993       3


Q ss_pred             chhhhcchhhHHHHHHHHHhhhhHHHHHhhhhHHHHhhhHHHHHHhhccccchhhhhccccccccchhhhHHHHHHHhhh
Q psy17621        224 SSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDELKTVKRWSSDIREMPQCKALEKYLKDFK  303 (448)
Q Consensus       224 ~~di~~~~~~~~~~~~~~~~~~~~~~~~~Lp~e~~~~r~w~~l~~~F~~~~~~~~~~~~~~~I~~~~~~~~le~~~~~f~  303 (448)
                      ++||++|                      ||.|+          ++|             +.||            ++|+
T Consensus       259 s~DI~~q----------------------LP~E~----------~rF-------------~~vd------------~~~~  281 (3245)
T 3vkg_A          259 SGDINQL----------------------LPAES----------TRF-------------KSIN------------SEFI  281 (3245)
T ss_dssp             ---CTTT----------------------SHHHH----------HHH-------------HHHH------------HHHH
T ss_pred             cHHHHHH----------------------hHHHH----------HHH-------------HHHH------------HHHH
Confidence            5799999                      99999          999             9999            9999


Q ss_pred             hhhHHHHHHHhccCCceeeecccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCeeEecCcHHHHHHhcC-CChhHHH
Q psy17621        304 KSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKRNAFPRFFFISDDELLSILGS-SSPTAIQ  382 (448)
Q Consensus       304 ~~~~~~im~~~~~~p~v~~~~~~~~~~~~L~~~~~~L~~i~k~L~~yLe~kR~~FPRFyFlSd~eLL~ils~-~~p~~i~  382 (448)
                      +     ||.++.++|+|+++|..|++++.|+++++.|+.|+|+|++|||+||..|||||||||+|||+|||+ +||..||
T Consensus       282 ~-----im~~~~~~~~v~~~~~~~~~~~~L~~~~~~Le~iqk~L~~yLE~KR~~FPRFyFlSd~eLLeILs~~~dp~~vq  356 (3245)
T 3vkg_A          282 A-----ILKKVSGAPLILEVLAIERIQQTMERLSDLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQ  356 (3245)
T ss_dssp             H-----HHHHHHHSCBHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGGGSCHHHHHHHHHGGGCGGGTG
T ss_pred             H-----HHHHHhcCCceEeecCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhhccCcHHHHHHHHcCCChHHHH
Confidence            9     999999999999999999999999999999999999999999999999999999999999999996 7999999


Q ss_pred             HHHHhhhhcccceeecccCCCCccEEEEEeeCCCCEEEccCCccC--CCCHHHHHHHHHHHHHHhcC
Q psy17621        383 EHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLT--FGEIEQWMTRVLDEMMTGSP  447 (448)
Q Consensus       383 ~~l~klF~~I~~l~~~~~~~~~~~~I~g~~S~eGE~v~~~~~v~~--~g~ve~WL~~le~~mr~tl~  447 (448)
                      +||+|||+||++|.|+++.    ..|+||+|++||+|+|.+||.+  .|+||.||++||++||.|||
T Consensus       357 ~hl~K~F~~I~~l~f~~~~----~~i~~m~S~eGE~v~~~~~v~~~~~~~ve~WL~~le~~m~~tl~  419 (3245)
T 3vkg_A          357 KHFRKMFAGLANLTLDDEK----TTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLA  419 (3245)
T ss_dssp             GGGGGTCSSCCEEEECTTS----CEEEEEECTTSCEEEEEEEEESSSSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhheEEecCCC----CEEEEEEcCCCCEEEeCCccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999998753    4789999999999999999965  48999999999999999986

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A

Probab=100.00  E-value=5.8e-52  Score=501.85  Aligned_cols=255  Identities=22%  Similarity=0.354  Sum_probs=239.7

Q ss_pred             ccchHHHHHHHHHhcchhhhhhhc--cccccccccCCHHHHHHHHHHHHHHHhhhhcCcCCCCcHHHHHHHHHHHHHHHH
Q psy17621        118 AGNDRAMKDYLGAQNAQLDALVVK--KGEDRGFQLGDLSEMLLQLEDSCMNLQSMAGSAYIGPFLPVVQEWEKRLSVVSE  195 (448)
Q Consensus       118 Ag~E~alke~lkk~~~ql~~l~fk--~~~~~~~~l~~~~el~~~led~~~~L~~m~~S~~~~~f~~~i~~w~~kL~~~~~  195 (448)
                      |.+|.++|+.++++...|+.+.|.  .++++.++|+++++|++.|+||++.|++|++|||+++|+++|.+|+++|+.+++
T Consensus       217 AskE~~iE~~L~~i~~~W~~~~f~~~~~~~~~~~l~~~d~i~~~l~d~~~~l~~m~~s~~~~~f~~~~~~w~~~L~~~~~  296 (2695)
T 4akg_A          217 KSDEFVIEKSLNRIKKFWKEAQYEVIEHSSGLKLVREWDVLEQACKEDLEELVSMKASNYYKIFEQDCLDLESKLTKLSE  296 (2695)
T ss_dssp             ----CHHHHHHHHHHHHHTSCCCEEEECSSSCEEEECTHHHHHHHHHHHHHHHHTSSCSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhhceEEEEEEecCCeEEECCHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Confidence            457899999999999999987774  555556899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHhhhhcchhhhcchhhHHHHHHHHHhhhhHHHHHhhhhHHHHhhhHHHHHHhhccccc
Q psy17621        196 VLYTWIQLQRKWLYLEGVEDELKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFVELKHEALRERHWTELMKKTGVEDE  275 (448)
Q Consensus       196 il~~w~~vQ~~W~~Le~if~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~Lp~e~~~~r~w~~l~~~F~~~~~  275 (448)
                      +|+.|.+||++|+||++||+       .++||++|                      ||.|+          ++|     
T Consensus       297 ~l~~w~~vQ~~W~yLe~iF~-------~s~di~~q----------------------Lp~e~----------~~F-----  332 (2695)
T 4akg_A          297 IQVNWVEVQFYWLDLYGILG-------ENLDIQNF----------------------LPLET----------SKF-----  332 (2695)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-------SCSHHHHH----------------------CHHHH----------HHH-----
T ss_pred             HHHHHHHHHHHHHHHHhHhc-------CcHHHHHH----------------------hHHHH----------HHH-----
Confidence            99999999999999999994       46799999                      99999          999     


Q ss_pred             hhhhhccccccccchhhhHHHHHHHhhhhhhHHHHHHHhccCCceeeecccccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy17621        276 LKTVKRWSSDIREMPQCKALEKYLKDFKKSVALFIMWETHKNPRVIEQCLVPNRLEHLEQLKDGLEACEKSLQDYLTDKR  355 (448)
Q Consensus       276 ~~~~~~~~~~I~~~~~~~~le~~~~~f~~~~~~~im~~~~~~p~v~~~~~~~~~~~~L~~~~~~L~~i~k~L~~yLe~kR  355 (448)
                              +.||            ++|++     ||.++.++|+|+++|..|++++.|+++++.|+.|+|+|++|||+||
T Consensus       333 --------~~vd------------~~~~~-----im~~~~~~~~v~~~~~~~~~~~~L~~~~~~Le~iqk~L~~yLe~KR  387 (2695)
T 4akg_A          333 --------KSLT------------SEYKM-----ITTRAFQLDTTIEVIHIPNFDTTLKLTIDSLKMIKSSLSTFLERQR  387 (2695)
T ss_dssp             --------HHHH------------HHHHH-----HHHHHHTTCCSGGGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHH------------HHHHH-----HHHHHHhCCCeeeecccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    9999            99999     9999999999999999999999999999999999999999999999


Q ss_pred             ccCCeeEecCcHHHHHHhcC-CChhHHHHHHHhhhhcccceeecccCCCCccEEEEEeeCCCCEEEccCCccCCC--CHH
Q psy17621        356 NAFPRFFFISDDELLSILGS-SSPTAIQEHIVKMFDNVQSLKMADSESPGVKTISAMISCENEVMDFRTPQLTFG--EIE  432 (448)
Q Consensus       356 ~~FPRFyFlSd~eLL~ils~-~~p~~i~~~l~klF~~I~~l~~~~~~~~~~~~I~g~~S~eGE~v~~~~~v~~~g--~ve  432 (448)
                      ..|||||||||+|||+|||+ +||..||+|++|||+||++|.|++      ..|+||+|++||+|+|.+||.+.|  +||
T Consensus       388 ~~FPRFyFlsd~eLLeiLs~~~dp~~vq~hl~k~F~~i~~l~f~~------~~i~~m~s~egE~v~~~~~v~~~~~~~ve  461 (2695)
T 4akg_A          388 RQFPRFYFLGNDDLLKIIGSGKHHDQVSKFMKKMFGSIESIIFLE------DFITGVRSVEGEVLNLNEKIELKDSIQAQ  461 (2695)
T ss_dssp             HHSTTHHHHCHHHHHHHHHTTTTSGGGHHHHHHHTSSEEEEEECS------SEEEEEEETTSCEEEEEEEEECCTTCCHH
T ss_pred             hhCCcceecCcHHHHHHHhcCCCHHHHHHHHHHHhhhhhhEEecC------ceEEEEEcCCCCEEEeCCceecCCCCCHH
Confidence            99999999999999999997 899999999999999999999983      379999999999999999999875  799


Q ss_pred             HHHHHHHHHHHHhcC
Q psy17621        433 QWMTRVLDEMMTGSP  447 (448)
Q Consensus       433 ~WL~~le~~mr~tl~  447 (448)
                      .||++||++||.|||
T Consensus       462 ~WL~~le~~m~~tl~  476 (2695)
T 4akg_A          462 EWLNILDTEIKLSVF  476 (2695)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999986

>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*

Probab=97.60  E-value=4.8e-06  Score=103.36  Aligned_cols=104  Identities=13%  Similarity=0.183  Sum_probs=82.3

Q ss_pred             CCccchHHHHhHhcc--ccccccccc--cccc-cchhhHHHHHHHhhcC----CCCCccccccccchhhhhhcccchhHH
Q psy17621         37 GEGMDFLAFGKILSG--LSQCGAWGC--FDMM-TANRYWTKKAIYDFGK----TSKPRTEWMLDNIGMTVLAANGVWWTA  107 (448)
Q Consensus        37 ~e~~ey~~f~k~~~~--~~~~~~W~~--~d~~-~s~R~~~~~ai~~~~~----~~~~r~~Wil~~~~q~~L~~~qi~wt~  107 (448)
                      |..-|+++|.+++..  -+.++.|+.  .++| .|+|+.++.|+.+|..    +..++.+|+.+||+|++|++.|++||.
T Consensus       383 S~eGE~v~~~~~v~~~~~~~ve~WL~~le~~m~~tl~~~~~~~~~~~~~~~~~~~~~~~~w~~~~p~Qv~l~~~qi~wT~  462 (3245)
T 3vkg_A          383 SAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQIVWST  462 (3245)
T ss_dssp             CTTSCEEEEEEEEESSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTCHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEeCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccHHHHHHHCcHHHHHHHHHheeHH
Confidence            333367777787743  478899994  6777 7899999999999873    234688999999999999999999999


Q ss_pred             HHHHHHHHHHc---cchHHHHHHHHHhcchhhhhhh
Q psy17621        108 EVENVFSKIRA---GNDRAMKDYLGAQNAQLDALVV  140 (448)
Q Consensus       108 EVe~i~~~I~A---g~E~alke~lkk~~~ql~~l~f  140 (448)
                      +|+.++.....   +.+.+++++.+++..+++.++.
T Consensus       463 ~ve~al~~~~~~~~~~~~~l~~~~~~~~~~l~~l~~  498 (3245)
T 3vkg_A          463 QVDQALGGGTLQQSKIQEQLQSIEQTTQMILNNLAD  498 (3245)
T ss_dssp             HHHHHHTTSCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999975322   2456899999988888887653

>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A

Probab=97.06  E-value=9.2e-05  Score=91.41  Aligned_cols=90  Identities=11%  Similarity=0.034  Sum_probs=69.2

Q ss_pred             CCccchHHHHhHhcccc--ccccccc--cccc-cchhhHHHHHHHhhcCCCCCccccccccchhhhhhcccchhHHHHHH
Q psy17621         37 GEGMDFLAFGKILSGLS--QCGAWGC--FDMM-TANRYWTKKAIYDFGKTSKPRTEWMLDNIGMTVLAANGVWWTAEVEN  111 (448)
Q Consensus        37 ~e~~ey~~f~k~~~~~~--~~~~W~~--~d~~-~s~R~~~~~ai~~~~~~~~~r~~Wil~~~~q~~L~~~qi~wt~EVe~  111 (448)
                      |..-|++.|.+.+...+  .++.|+.  .++| .|+|+.++.|+.+|... .++.+|+.+||+|+++++.|++||.+||+
T Consensus       440 s~egE~v~~~~~v~~~~~~~ve~WL~~le~~m~~tl~~~~~~~~~~~~~~-~~~~~w~~~~p~Qv~l~~~qi~wt~~ve~  518 (2695)
T 4akg_A          440 SVEGEVLNLNEKIELKDSIQAQEWLNILDTEIKLSVFTQFRDCLGQIKDG-TDIEVVVSKYIFQAILLSAQVMWTELVEK  518 (2695)
T ss_dssp             ETTSCEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-CCHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEeCCceecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CcHHHHHHHChHHHHHHHHHHHHHHHHHH
Confidence            33346677778776544  6799994  6777 78999999999998862 46889999999999999999999999999


Q ss_pred             HHHHHHccchHHHHHHHHH
Q psy17621        112 VFSKIRAGNDRAMKDYLGA  130 (448)
Q Consensus       112 i~~~I~Ag~E~alke~lkk  130 (448)
                      ++..   +...++++++++
T Consensus       519 a~~~---~~~~~~~~~~~~  534 (2695)
T 4akg_A          519 CLQT---NQFSKYWKEVDM  534 (2695)
T ss_dssp             HHHH---TCHHHHHHHHHH
T ss_pred             HHHh---ccHHHHHHHHHH
Confidence            9864   333344444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00