Psyllid ID: psy17650

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
ANIEENNSKLFGKLAKQSGGSGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIRNDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSPLSVKERRNSIDINPEVNFSQSPHKKINGLAELNHALMKTMGDSASTEDKPDHFTSKGSSGTRITVELGLVASFMSVLTESTFQGRGHISPLNSTLTRSESEFKTSGVSTTNSSRGPSPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLIN
cHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHcccccccccEEEEEccccccccccccccccc
ccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccHHEEEEEHHHHHHHcccccccEEEEEEccEEEEccHHHHHHHcccccccEEEEEEEEcccHHHccccHHHcc
ANIEENNSKLFGKLakqsggsgtfaPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLvkeeqgptlEIVQTIQSTTLVLQKAKDVYLQKCEELDKLrrdngsakDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSckirnddrdhkihveikplsantnqISASVDELRVTagnltlsplsvkerrnsidinpevnfsqsphkkiNGLAELNHALMKTmgdsastedkpdhftskgssgtrITVELGLVASFMSVLtestfqgrghisplnstltrsesefktsgvsttnssrgpspltigmsdtiPLAVAFHEIIHSYfrgtdetrcqvkmsgdmmlsfPAGIVSIltsnpspaqlkfkvSNISHIEnmlpnkqlin
ANIEENNSKLFGKLAKQSGGSGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKhklvkeeqgptleIVQTIQSTTLVLQKAKDVYLQKCEEldklrrdngsakdlekaelkvkkaqedyktiVDKYALIKEDFEKRmstsckirnddrdhkihveikplsantnqISASVDELRVTAGnltlsplsvkerrnsidinpevnfsqsphKKINGLAELNHALMKTMGDsastedkpdhftskgssgtrITVELGLVASFMSVLTEstfqgrghisplnstltrsesefktsgvsttnssrgpsplTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIenmlpnkqlin
ANIEENNSKLFGKLAKQSGGSGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIRNDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSPLSVKERRNSIDINPEVNFSQSPHKKINGLAELNHALMKTMGDSASTEDKPDHFTSKGSSGTRITVELGLVASFMSVLTESTFQGRGHISPLNSTLTRSESEFKTSGVSTTNSSRGPSPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLIN
*********************GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEEL*************************DYKTIVDKYALIKEDFE*****************IHVE*******************V**********************************************************************RITVELGLVASFMSVLTESTF**************************************IGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILT*****************************
ANIEENNSKLFGKLAK*****GTFAPLWQVLKTSIEKIATVQVKMMQK**DLVK*********************PTLEIVQT*Q*************************************************IVDKYALIKEDFEKRMSTSCKIRNDDRDHKIHVEIKPLSANTNQISASVDELRVTAG**************************************************************************************************************************************LAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNK****
********KLFGKLAKQSGGSGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIRNDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSPLSVKERRNSIDINPEVNFSQSPHKKINGLAELNHALMKTM******************SGTRITVELGLVASFMSVLTESTFQGRGHISPLNST**********************SPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLIN
ANIEENNSKLFGKLAKQSGGSGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIRNDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSP******************************E************************************************************************************PSPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNK****
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ANIEENNSKLFGKLAKQSGGSGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVxxxxxxxxxxxxxxxxxxxxxNGSAKDxxxxxxxxxxxxxxxxxxxxxYALIKEDFEKRMSTSCKIRNDDRDHKIHVEIKPLSANTNQISASVDELRVTAGNLTLSPLSVKERRNSIDINPEVNFSQSPHKKINGLAELNHALMKTMGDSASTEDKPDHFTSKGSSGTRITVELGLVASFMSVLTESTFQGRGHISPLNSTLTRSESEFKTSGVSTTNSSRGPSPLTIGMSDTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query396 2.2.26 [Sep-21-2011]
Q5R807 810 FCH domain only protein 2 yes N/A 0.424 0.207 0.465 6e-35
Q0JRZ9 810 FCH domain only protein 2 yes N/A 0.424 0.207 0.459 3e-34
Q3UQN2 809 FCH domain only protein 2 yes N/A 0.424 0.207 0.447 9e-34
D3ZYR1 809 FCH domain only protein 2 yes N/A 0.424 0.207 0.447 2e-33
Q502I9 848 FCH domain only protein 2 yes N/A 0.424 0.198 0.424 2e-30
E7FBF7 897 FCH domain only protein 1 no N/A 0.401 0.177 0.450 6e-30
Q8K285 873 FCH domain only protein 1 no N/A 0.378 0.171 0.444 3e-29
O14526 889 FCH domain only protein 1 no N/A 0.378 0.168 0.431 1e-28
Q8VD37 806 SH3-containing GRB2-like no N/A 0.224 0.110 0.555 2e-25
Q9BQI5 828 SH3-containing GRB2-like no N/A 0.217 0.103 0.563 3e-25
>sp|Q5R807|FCHO2_PONAB FCH domain only protein 2 OS=Pongo abelii GN=FCHO2 PE=2 SV=1 Back     alignment and function desciption
 Score =  148 bits (374), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 115/172 (66%), Gaps = 4/172 (2%)

Query: 1   ANIEENNSKLFGKLAKQSGGS---GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVC 57
           A IEE  S+   KLAK +      GTFAP+W V KTS EK+A   + +++K+ +L+K+V 
Sbjct: 43  ATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQ 102

Query: 58  KYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKD 117
           KY EE  K HK  KEE   TLE VQTIQSTT  LQK+K+ Y  KC E ++L+++  + ++
Sbjct: 103 KYGEEQVKSHKKTKEEVAGTLEAVQTIQSTTQALQKSKENYNAKCVEQERLKKEGATQRE 162

Query: 118 LEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMS-TSCKIRNDDRDHKIHVE 168
           +EKA +K KKA + YK  V+KYAL K DFE++M+ T+ K ++ +  H IH++
Sbjct: 163 IEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIK 214
Functions in an early step of clathrin-mediated endocytosis. Has both a membrane binding/bending activity and the ability to recruit proteins essential to the formation of functional clathrin-coated pits. Has a lipid-binding activity with a preference for membranes enriched in phosphatidylserine and phosphoinositides (Pi(4,5) biphosphate) like the plasma membrane. Its membrane-bending activity might be important for the subsequent action of clathrin and adaptors in the formation of clathrin-coated vesicles. Involved in adaptor protein complex AP-2-dependent endocytosis of the transferin receptor, it also functions in the AP-2-independent endocytosis of the LDL receptor.
Pongo abelii (taxid: 9601)
>sp|Q0JRZ9|FCHO2_HUMAN FCH domain only protein 2 OS=Homo sapiens GN=FCHO2 PE=1 SV=2 Back     alignment and function description
>sp|Q3UQN2|FCHO2_MOUSE FCH domain only protein 2 OS=Mus musculus GN=Fcho2 PE=1 SV=1 Back     alignment and function description
>sp|D3ZYR1|FCHO2_RAT FCH domain only protein 2 OS=Rattus norvegicus GN=Fcho2 PE=1 SV=1 Back     alignment and function description
>sp|Q502I9|FCHO2_DANRE FCH domain only protein 2 OS=Danio rerio GN=fcho2 PE=2 SV=1 Back     alignment and function description
>sp|E7FBF7|FCHO1_DANRE FCH domain only protein 1 OS=Danio rerio GN=fcho1 PE=1 SV=2 Back     alignment and function description
>sp|Q8K285|FCHO1_MOUSE FCH domain only protein 1 OS=Mus musculus GN=Fcho1 PE=1 SV=2 Back     alignment and function description
>sp|O14526|FCHO1_HUMAN FCH domain only protein 1 OS=Homo sapiens GN=FCHO1 PE=1 SV=2 Back     alignment and function description
>sp|Q8VD37|SGIP1_MOUSE SH3-containing GRB2-like protein 3-interacting protein 1 OS=Mus musculus GN=Sgip1 PE=1 SV=1 Back     alignment and function description
>sp|Q9BQI5|SGIP1_HUMAN SH3-containing GRB2-like protein 3-interacting protein 1 OS=Homo sapiens GN=SGIP1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
328724767 960 PREDICTED: FCH domain only protein 2-lik 0.391 0.161 0.670 1e-53
328724769 899 PREDICTED: FCH domain only protein 2-lik 0.391 0.172 0.670 2e-53
239792982247 ACYPI004283 [Acyrthosiphon pisum] 0.391 0.627 0.670 1e-52
270014770 913 hypothetical protein TcasGA2_TC005182 [T 0.391 0.169 0.620 2e-50
357617880 870 hypothetical protein KGM_01600 [Danaus p 0.542 0.247 0.440 3e-46
383864933 1016 PREDICTED: FCH domain only protein 2-lik 0.396 0.154 0.571 5e-46
383864931 1020 PREDICTED: FCH domain only protein 2-lik 0.396 0.153 0.571 7e-46
50510439 512 mKIAA0290 protein [Mus musculus] 0.856 0.662 0.319 9e-46
328791845 1004 PREDICTED: FCH domain only protein 2-lik 0.401 0.158 0.564 9e-46
380028499 985 PREDICTED: LOW QUALITY PROTEIN: FCH doma 0.401 0.161 0.564 1e-45
>gi|328724767|ref|XP_003248248.1| PREDICTED: FCH domain only protein 2-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/158 (67%), Positives = 131/158 (82%), Gaps = 3/158 (1%)

Query: 2   NIEENNSKLFGKLAKQSGGS---GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCK 58
           NIEE  SKL  KLAKQ+  S   GTF PLWQ+L+ SIEK+ T+ ++M+ KV +LVKDV K
Sbjct: 43  NIEETCSKLLAKLAKQTSSSSNTGTFNPLWQLLRLSIEKLTTIHIQMVHKVCELVKDVTK 102

Query: 59  YTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKDL 118
           YT+ELQKKHK VKEEQ  TL+ VQ IQSTTL LQKAKD+Y+QK  ELDKLR+DN SAKD+
Sbjct: 103 YTDELQKKHKNVKEEQSGTLDAVQAIQSTTLALQKAKDIYVQKGGELDKLRKDNASAKDI 162

Query: 119 EKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKI 156
           EKAE+K+KKAQ+DYK +VDKY+ +KE+FEK+M+T+CKI
Sbjct: 163 EKAEIKLKKAQDDYKVLVDKYSNVKEEFEKKMNTACKI 200

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328724769|ref|XP_001950180.2| PREDICTED: FCH domain only protein 2-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|239792982|dbj|BAH72764.1| ACYPI004283 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|270014770|gb|EFA11218.1| hypothetical protein TcasGA2_TC005182 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|357617880|gb|EHJ71048.1| hypothetical protein KGM_01600 [Danaus plexippus] Back     alignment and taxonomy information
>gi|383864933|ref|XP_003707932.1| PREDICTED: FCH domain only protein 2-like isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
>gi|383864931|ref|XP_003707931.1| PREDICTED: FCH domain only protein 2-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|50510439|dbj|BAD32205.1| mKIAA0290 protein [Mus musculus] Back     alignment and taxonomy information
>gi|328791845|ref|XP_624601.3| PREDICTED: FCH domain only protein 2-like isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|380028499|ref|XP_003697937.1| PREDICTED: LOW QUALITY PROTEIN: FCH domain only protein 2-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
UNIPROTKB|Q5R807 810 FCHO2 "FCH domain only protein 0.469 0.229 0.437 2.1e-62
UNIPROTKB|Q0JRZ9 810 FCHO2 "FCH domain only protein 0.469 0.229 0.432 9.5e-62
UNIPROTKB|F1MYS2 813 FCHO2 "Uncharacterized protein 0.469 0.228 0.427 2.1e-61
MGI|MGI:3505790 809 Fcho2 "FCH domain only 2" [Mus 0.469 0.229 0.421 3.3e-61
RGD|1565396 809 Fcho2 "FCH domain only 2" [Rat 0.469 0.229 0.421 9e-61
ZFIN|ZDB-GENE-050522-228 848 fcho2 "FCH domain only 2" [Dan 0.474 0.221 0.395 1.1e-56
UNIPROTKB|O14526 889 FCHO1 "FCH domain only protein 0.477 0.212 0.377 3.9e-48
MGI|MGI:1921265 873 Fcho1 "FCH domain only 1" [Mus 0.474 0.215 0.380 4.6e-48
UNIPROTKB|F1PN99 877 FCHO1 "Uncharacterized protein 0.477 0.215 0.372 6.4e-48
UNIPROTKB|F1MZ25 889 FCHO1 "Uncharacterized protein 0.477 0.212 0.362 1.3e-47
UNIPROTKB|Q5R807 FCHO2 "FCH domain only protein 2" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
 Score = 386 (140.9 bits), Expect = 2.1e-62, Sum P(2) = 2.1e-62
 Identities = 84/192 (43%), Positives = 123/192 (64%)

Query:     1 ANIEENNSKLFGKLAKQSGGS---GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVC 57
             A IEE  S+   KLAK +      GTFAP+W V KTS EK+A   + +++K+ +L+K+V 
Sbjct:    43 ATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQ 102

Query:    58 KYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKD 117
             KY EE  K HK  KEE   TLE VQTIQSTT  LQK+K+ Y  KC E ++L+++  + ++
Sbjct:   103 KYGEEQVKSHKKTKEEVAGTLEAVQTIQSTTQALQKSKENYNAKCVEQERLKKEGATQRE 162

Query:   118 LEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMS-TSCKIRNDDRDHKIHVE--IKPLSA 174
             +EKA +K KKA + YK  V+KYAL K DFE++M+ T+ K ++ +  H IH++  I  LS 
Sbjct:   163 IEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEVIGSLSN 222

Query:   175 NTNQISASVDEL 186
                +I   + ++
Sbjct:   223 AIKEIHLQIGQV 234
GO:0001786 "phosphatidylserine binding" evidence=ISS
GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISS
GO:0005905 "coated pit" evidence=ISS
GO:0010324 "membrane invagination" evidence=ISS
GO:0035091 "phosphatidylinositol binding" evidence=ISS
GO:0048268 "clathrin coat assembly" evidence=ISS
GO:0072583 "clathrin-mediated endocytosis" evidence=ISS
GO:0072659 "protein localization to plasma membrane" evidence=ISS
UNIPROTKB|Q0JRZ9 FCHO2 "FCH domain only protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MYS2 FCHO2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:3505790 Fcho2 "FCH domain only 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1565396 Fcho2 "FCH domain only 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050522-228 fcho2 "FCH domain only 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O14526 FCHO1 "FCH domain only protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1921265 Fcho1 "FCH domain only 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PN99 FCHO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MZ25 FCHO1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
cd07648261 cd07648, F-BAR_FCHO, The F-BAR (FES-CIP4 Homology 2e-71
cd07673269 cd07673, F-BAR_FCHO2, The F-BAR (FES-CIP4 Homology 6e-42
cd07674261 cd07674, F-BAR_FCHO1, The F-BAR (FES-CIP4 Homology 2e-38
cd09265 258 cd09265, AP_Syp1_like_MHD, Mu-homology domain (MHD 3e-32
cd09267 267 cd09267, FCHo2_MHD, mu-homology domain (MHD) of F- 5e-23
cd09268 259 cd09268, FCHo1_MHD, mu-homology domain (MHD) of F- 7e-20
cd09266 261 cd09266, SGIP1_MHD, mu-homology domain (MHD) of Sc 8e-20
pfam10291 251 pfam10291, muHD, Muniscin C-terminal mu homology d 9e-18
cd07647239 cd07647, F-BAR_PSTPIP, The F-BAR (FES-CIP4 Homolog 6e-10
cd07651236 cd07651, F-BAR_PombeCdc15_like, The F-BAR (FES-CIP 2e-04
cd07610191 cd07610, FCH_F-BAR, The Extended FES-CIP4 Homology 0.004
cd09257 246 cd09257, AP_muniscins_like_MHD, Mu-homology domain 0.004
>gnl|CDD|153332 cd07648, F-BAR_FCHO, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins Back     alignment and domain information 
 Score =  224 bits (573), Expect = 2e-71
 Identities = 87/158 (55%), Positives = 116/158 (73%), Gaps = 3/158 (1%)

Query: 1   ANIEENNSKLFGKLAKQSGGS---GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVC 57
           A IEE  SK   KLAKQ+  S   GTFAPLW VL+ S EK++ + ++++QK+ +L+KDV 
Sbjct: 32  ATIEETYSKALNKLAKQASNSSQLGTFAPLWLVLRVSTEKLSELHLQLVQKLQELIKDVQ 91

Query: 58  KYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKD 117
           KY EE  KKHK VKEE+  T E VQ IQ+TT  LQKAK+ Y  +C EL++LRR+N S K+
Sbjct: 92  KYGEEQHKKHKKVKEEESGTAEAVQAIQTTTAALQKAKEAYHARCLELERLRRENASPKE 151

Query: 118 LEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCK 155
           +EKAE K+KKAQ++YK +V+KY  I+ DFE +M+ SCK
Sbjct: 152 IEKAEAKLKKAQDEYKALVEKYNNIRADFETKMTDSCK 189

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Proteins in this group have been named FCH domain Only (FCHO) proteins. Vertebrates have two members, FCHO1 and FCHO2. These proteins contain an F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules. Length = 261
>gnl|CDD|153357 cd07673, F-BAR_FCHO2, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 2 protein Back     alignment and domain information
>gnl|CDD|153358 cd07674, F-BAR_FCHO1, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 1 protein Back     alignment and domain information
>gnl|CDD|211376 cd09265, AP_Syp1_like_MHD, Mu-homology domain (MHD) of endocytic adaptor protein (AP), Syp1 Back     alignment and domain information
>gnl|CDD|211378 cd09267, FCHo2_MHD, mu-homology domain (MHD) of F-BAR domain-containing Fer/Cip4 homology domain-only protein 2 (FCH domain only 2 or FCHo2) and similar proteins Back     alignment and domain information
>gnl|CDD|211379 cd09268, FCHo1_MHD, mu-homology domain (MHD) of F-BAR domain-containing Fer/Cip4 homology domain-only protein 1 (FCH domain only 1 or FCHo1, also known as KIAA0290) and similar proteins Back     alignment and domain information
>gnl|CDD|211377 cd09266, SGIP1_MHD, mu-homology domain (MHD) of Scr homology 3 (SH3)-domain growth factor receptor-bound 2 (GRB2)-like (endophilin) interacting protein 1 (also known as endophilin-3-interacting protein, SGIP1) and similar proteins Back     alignment and domain information
>gnl|CDD|220677 pfam10291, muHD, Muniscin C-terminal mu homology domain Back     alignment and domain information
>gnl|CDD|153331 cd07647, F-BAR_PSTPIP, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins Back     alignment and domain information
>gnl|CDD|153335 cd07651, F-BAR_PombeCdc15_like, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Schizosaccharomyces pombe Cdc15, and similar proteins Back     alignment and domain information
>gnl|CDD|153294 cd07610, FCH_F-BAR, The Extended FES-CIP4 Homology (FCH) or F-BAR (FCH and Bin/Amphiphysin/Rvs) domain, a dimerization module that binds and bends membranes Back     alignment and domain information
>gnl|CDD|211368 cd09257, AP_muniscins_like_MHD, Mu-homology domain (MHD) of muniscins adaptor proteins (AP) and similar proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 396
KOG2398|consensus 611 100.0
cd07673269 F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/A 100.0
cd07674261 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/A 100.0
cd07648261 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Am 100.0
cd07671242 F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin 100.0
cd07672240 F-BAR_PSTPIP2 The F-BAR (FES-CIP4 Homology and Bin 100.0
cd07679258 F-BAR_PACSIN2 The F-BAR (FES-CIP4 Homology and Bin 100.0
cd07649233 F-BAR_GAS7 The F-BAR (FES-CIP4 Homology and Bin/Am 100.0
cd07681258 F-BAR_PACSIN3 The F-BAR (FES-CIP4 Homology and Bin 100.0
cd07647239 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/ 100.0
cd07651236 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology 100.0
cd07680258 F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin 99.98
cd07658239 F-BAR_NOSTRIN The F-BAR (FES-CIP4 Homology and Bin 99.97
cd07655258 F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/ 99.97
KOG2856|consensus472 99.97
cd07653251 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and B 99.9
cd07650228 F-BAR_Syp1p_like The F-BAR (FES-CIP4 Homology and 99.88
cd07676253 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/A 99.85
cd07652234 F-BAR_Rgd1 The F-BAR (FES-CIP4 Homology and Bin/Am 99.82
cd07610191 FCH_F-BAR The Extended FES-CIP4 Homology (FCH) or 99.78
cd07675252 F-BAR_FNBP1L The F-BAR (FES-CIP4 Homology and Bin/ 99.69
cd07657237 F-BAR_Fes_Fer The F-BAR (FES-CIP4 Homology and Bin 99.54
PF10291 257 muHD: Muniscin C-terminal mu homology domain; Inte 99.53
cd07686234 F-BAR_Fer The F-BAR (FES-CIP4 Homology and Bin/Amp 99.36
cd07656241 F-BAR_srGAP The F-BAR (FES-CIP4 Homology and Bin/A 99.31
cd07654264 F-BAR_FCHSD The F-BAR (FES-CIP4 Homology and Bin/A 99.09
cd07677260 F-BAR_FCHSD2 The F-BAR (FES-CIP4 Homology and Bin/ 98.85
cd07685237 F-BAR_Fes The F-BAR (FES-CIP4 Homology and Bin/Amp 98.79
cd07678263 F-BAR_FCHSD1 The F-BAR (FES-CIP4 Homology and Bin/ 98.74
cd07683253 F-BAR_srGAP1 The F-BAR (FES-CIP4 Homology and Bin/ 98.66
cd07682263 F-BAR_srGAP2 The F-BAR (FES-CIP4 Homology and Bin/ 98.62
PF0061191 FCH: Fes/CIP4, and EFC/F-BAR homology domain; Inte 98.6
cd07684253 F-BAR_srGAP3 The F-BAR (FES-CIP4 Homology and Bin/ 98.58
KOG4429|consensus421 98.43
smart0005587 FCH Fes/CIP4 homology domain. Alignment extended f 98.39
cd07307194 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimeri 97.89
cd07598211 BAR_FAM92 The Bin/Amphiphysin/Rvs (BAR) domain of 97.27
cd07647239 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/ 96.41
PF03114229 BAR: BAR domain; InterPro: IPR004148 Endocytosis a 96.37
PF09325236 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vp 96.13
cd07657237 F-BAR_Fes_Fer The F-BAR (FES-CIP4 Homology and Bin 96.1
cd07679258 F-BAR_PACSIN2 The F-BAR (FES-CIP4 Homology and Bin 95.91
cd07596218 BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of So 95.88
cd07671242 F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin 95.82
cd07675252 F-BAR_FNBP1L The F-BAR (FES-CIP4 Homology and Bin/ 95.82
cd07655258 F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/ 95.79
cd07624200 BAR_SNX7_30 The Bin/Amphiphysin/Rvs (BAR) domain o 95.6
cd07658239 F-BAR_NOSTRIN The F-BAR (FES-CIP4 Homology and Bin 95.5
cd07623224 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of 95.32
cd07604215 BAR_ASAPs The Bin/Amphiphysin/Rvs (BAR) domain of 95.24
cd07307194 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimeri 95.09
cd07664234 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of S 95.07
cd07613223 BAR_Endophilin_A1 The Bin/Amphiphysin/Rvs (BAR) do 94.97
cd07640213 BAR_ASAP3 The Bin/Amphiphysin/Rvs (BAR) domain of 94.84
cd07593215 BAR_MUG137_fungi The Bin/Amphiphysin/Rvs (BAR) dom 94.84
cd07641215 BAR_ASAP1 The Bin/Amphiphysin/Rvs (BAR) domain of 94.84
cd07665234 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of S 94.51
cd07651236 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology 94.47
cd07676253 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/A 94.31
cd07660201 BAR_Arfaptin The Bin/Amphiphysin/Rvs (BAR) domain 94.11
cd07595244 BAR_RhoGAP_Rich-like The Bin/Amphiphysin/Rvs (BAR) 94.11
cd07605223 I-BAR_IMD Inverse (I)-BAR, also known as the IRSp5 93.93
PF06456229 Arfaptin: Arfaptin-like domain; InterPro: IPR01050 93.81
cd07648261 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Am 93.68
cd07645226 I-BAR_IMD_BAIAP2L1 Inverse (I)-BAR, also known as 93.62
cd07653251 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and B 93.57
cd07659215 BAR_PICK1 The Bin/Amphiphysin/Rvs (BAR) domain of 93.55
cd07672240 F-BAR_PSTPIP2 The F-BAR (FES-CIP4 Homology and Bin 93.53
PF08397219 IMD: IRSp53/MIM homology domain; InterPro: IPR0136 93.45
cd07649233 F-BAR_GAS7 The F-BAR (FES-CIP4 Homology and Bin/Am 93.23
cd07615223 BAR_Endophilin_A3 The Bin/Amphiphysin/Rvs (BAR) do 93.06
PF06730219 FAM92: FAM92 protein; InterPro: IPR009602 This fam 92.94
cd07680258 F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin 92.91
cd07681258 F-BAR_PACSIN3 The F-BAR (FES-CIP4 Homology and Bin 92.84
cd07646232 I-BAR_IMD_IRSp53 Inverse (I)-BAR, also known as th 92.68
cd07627216 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of 92.46
cd07673269 F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/A 92.24
cd07619248 BAR_Rich2 The Bin/Amphiphysin/Rvs (BAR) domain of 92.09
cd07674261 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/A 91.8
cd07656241 F-BAR_srGAP The F-BAR (FES-CIP4 Homology and Bin/A 91.57
KOG2398|consensus611 91.49
cd07621219 BAR_SNX5_6 The Bin/Amphiphysin/Rvs (BAR) domain of 91.38
cd07618246 BAR_Rich1 The Bin/Amphiphysin/Rvs (BAR) domain of 91.13
cd07623224 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of 90.96
cd00011203 BAR_Arfaptin_like The Bin/Amphiphysin/Rvs (BAR) do 90.91
cd07592223 BAR_Endophilin_A The Bin/Amphiphysin/Rvs (BAR) dom 90.79
KOG3565|consensus 640 90.26
KOG3771|consensus460 89.78
cd07666243 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of S 89.5
cd07634207 BAR_GAP10-like The Bin/Amphiphysin/Rvs (BAR) domai 89.41
cd07664234 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of S 89.01
cd07644215 I-BAR_IMD_BAIAP2L2 Inverse (I)-BAR, also known as 88.11
cd07665234 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of S 87.98
cd07662218 BAR_SNX6 The Bin/Amphiphysin/Rvs (BAR) domain of S 87.9
cd07606202 BAR_SFC_plant The Bin/Amphiphysin/Rvs (BAR) domain 87.58
cd07642215 BAR_ASAP2 The Bin/Amphiphysin/Rvs (BAR) domain of 87.54
KOG2856|consensus472 87.53
cd07663218 BAR_SNX5 The Bin/Amphiphysin/Rvs (BAR) domain of S 87.43
smart00721239 BAR BAR domain. 87.16
cd07627216 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of 87.09
cd07620257 BAR_SH3BP1 The Bin/Amphiphysin/Rvs (BAR) domain of 86.82
cd07630198 BAR_SNX_like The Bin/Amphiphysin/Rvs (BAR) domain 86.31
cd07601215 BAR_APPL The Bin/Amphiphysin/Rvs (BAR) domain of A 85.71
KOG1118|consensus366 85.68
cd07616229 BAR_Endophilin_B1 The Bin/Amphiphysin/Rvs (BAR) do 85.26
cd07643231 I-BAR_IMD_MIM Inverse (I)-BAR, also known as the I 85.16
cd07617220 BAR_Endophilin_B2 The Bin/Amphiphysin/Rvs (BAR) do 84.99
cd07663218 BAR_SNX5 The Bin/Amphiphysin/Rvs (BAR) domain of S 84.39
PF03114229 BAR: BAR domain; InterPro: IPR004148 Endocytosis a 84.26
cd07621219 BAR_SNX5_6 The Bin/Amphiphysin/Rvs (BAR) domain of 84.16
KOG0250|consensus 1074 83.9
cd07600242 BAR_Gvp36 The Bin/Amphiphysin/Rvs (BAR) domain of 83.83
cd07639200 BAR_ACAP1 The Bin/Amphiphysin/Rvs (BAR) domain of 83.8
PF05276239 SH3BP5: SH3 domain-binding protein 5 (SH3BP5); Int 83.7
cd07662218 BAR_SNX6 The Bin/Amphiphysin/Rvs (BAR) domain of S 83.67
PF03904230 DUF334: Domain of unknown function (DUF334); Inter 82.94
cd07633207 BAR_OPHN1 The Bin/Amphiphysin/Rvs (BAR) domain of 82.74
KOG0521|consensus 785 82.71
cd07603200 BAR_ACAPs The Bin/Amphiphysin/Rvs (BAR) domain of 82.6
cd07602207 BAR_RhoGAP_OPHN1-like The Bin/Amphiphysin/Rvs (BAR 81.69
cd07591224 BAR_Rvs161p The Bin/Amphiphysin/Rvs (BAR) domain o 81.44
KOG1924|consensus 1102 80.1
>KOG2398|consensus Back     alignment and domain information 
Probab=100.00  E-value=9.5e-48  Score=406.86  Aligned_cols=197  Identities=31%  Similarity=0.498  Sum_probs=178.4

Q ss_pred             ChhhHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCch
Q psy17650          1 ANIEENNSKLFGKLAKQSGG---SGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPT   77 (396)
Q Consensus         1 A~IEe~YAKsL~KLAKka~~---~GTl~~sW~~lk~e~Ekla~~H~~La~kL~EliK~l~~f~eeQkk~hKk~ke~~~~~   77 (396)
                      |.||+.|+|.|.++++++++   .|+|.++|++++.++++++.+|.+|++.|+++++++.+|.++|++.||+++++....
T Consensus        19 a~iE~~y~k~~~~l~~k~~~~~~~gs~~~~~~~~r~~~~~ma~~h~~l~~~l~~~i~~~~k~~~~~~k~~k~~~~~~v~~   98 (611)
T KOG2398|consen   19 ASIEEDYAKRMGKLAAKAKSYTENGSFAESWLVMRTSTEAMAKSHLELSRELQDLIKDVAKYYAEQLKTRKKSKEEGVEK   98 (611)
T ss_pred             HhhhHHHHHHHHHHhhccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            57999999999999999987   999999999999999999999999999999999999999999999999998875545


Q ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17650         78 LEIVQTIQ--STTLVLQKAKDVYLQKCEELDKLRRDNGSAKDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCK  155 (396)
Q Consensus        78 ~ea~k~~q--~~~~~l~KaKk~Y~~~CkE~E~lrke~~s~KeieKa~~K~kKA~e~Yk~~v~kye~~r~~wE~~m~~~cq  155 (396)
                      .+..|.+.  +...++.+++++|..+|.+.+.+++.....+++.|++.+.+++.++|+.++++|+.+|.+|+++|++.|.
T Consensus        99 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~k~~~~~~k~~~~i~~~~~~y~~~~~~~~~vr~~w~~~~~~~c~  178 (611)
T KOG2398|consen   99 LKQDQSKKKAKDTYEVLCAKSNYLHRCQEKESLKEKEKRKKELAKAELKIKEAREEYRSLVAKLEKVRKDWEQEMTDLCL  178 (611)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55444443  5677788899999999999999988878899999999999999999999999999999999999999999


Q ss_pred             HHhhccccchhhhhccCCC--------CCcchHhHHHHHHHhhcccccCCc
Q psy17650        156 IRNDDRDHKIHVEIKPLSA--------NTNQISASVDELRVTAGNLTLSPL  198 (396)
Q Consensus       156 ~Fqd~E~~Ri~v~ik~~~~--------~~~~~~as~eELr~sIeni~v~~~  198 (396)
                      +||+.|+.|+. ++|..++        .|..++++|++++++|++|+++.+
T Consensus       179 ~fQ~~Ee~rl~-~lk~~l~~~~~~is~~~~~~~q~~E~~k~~le~~sv~~~  228 (611)
T KOG2398|consen  179 KFQEIEESRLS-FLKEELWLFANQISESCVKIDQVMEEFKLTLESCSVDED  228 (611)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHhccchhHHHHHHHHhhccCCHHHH
Confidence            99999999986 4666553        478999999999999999999875

>cd07673 F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 2 protein Back     alignment and domain information
>cd07674 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 1 protein Back     alignment and domain information
>cd07648 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins Back     alignment and domain information
>cd07671 F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1 Back     alignment and domain information
>cd07672 F-BAR_PSTPIP2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 2 Back     alignment and domain information
>cd07679 F-BAR_PACSIN2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2) Back     alignment and domain information
>cd07649 F-BAR_GAS7 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7 Back     alignment and domain information
>cd07681 F-BAR_PACSIN3 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3) Back     alignment and domain information
>cd07647 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins Back     alignment and domain information
>cd07651 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Schizosaccharomyces pombe Cdc15, and similar proteins Back     alignment and domain information
>cd07680 F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) Back     alignment and domain information
>cd07658 F-BAR_NOSTRIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Nitric Oxide Synthase TRaffic INducer (NOSTRIN) Back     alignment and domain information
>cd07655 F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins Back     alignment and domain information
>KOG2856|consensus Back     alignment and domain information
>cd07653 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins Back     alignment and domain information
>cd07650 F-BAR_Syp1p_like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of yeast Syp1 protein Back     alignment and domain information
>cd07676 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17 Back     alignment and domain information
>cd07652 F-BAR_Rgd1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Saccharomyces cerevisiae Rho GTPase activating protein Rgd1 and similar proteins Back     alignment and domain information
>cd07610 FCH_F-BAR The Extended FES-CIP4 Homology (FCH) or F-BAR (FCH and Bin/Amphiphysin/Rvs) domain, a dimerization module that binds and bends membranes Back     alignment and domain information
>cd07675 F-BAR_FNBP1L The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 1-Like Back     alignment and domain information
>cd07657 F-BAR_Fes_Fer The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma) and Fer (Fes related) tyrosine kinases Back     alignment and domain information
>PF10291 muHD: Muniscin C-terminal mu homology domain; InterPro: IPR018808 The muniscins are a family of endocytic adaptors that is conserved from yeast to humans Back     alignment and domain information
>cd07686 F-BAR_Fer The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fer (Fes related) tyrosine kinase Back     alignment and domain information
>cd07656 F-BAR_srGAP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating Proteins Back     alignment and domain information
>cd07654 F-BAR_FCHSD The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH and double SH3 domains proteins (FCHSD) Back     alignment and domain information
>cd07677 F-BAR_FCHSD2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH and double SH3 domains 2 (FCHSD2) Back     alignment and domain information
>cd07685 F-BAR_Fes The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma) tyrosine kinase Back     alignment and domain information
>cd07678 F-BAR_FCHSD1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH and double SH3 domains 1 (FCHSD1) Back     alignment and domain information
>cd07683 F-BAR_srGAP1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating Protein 1 Back     alignment and domain information
>cd07682 F-BAR_srGAP2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating Protein 2 Back     alignment and domain information
>PF00611 FCH: Fes/CIP4, and EFC/F-BAR homology domain; InterPro: IPR001060 The FCH domain is a short conserved region of around 60 amino acids first described as a region of homology between FER and CIP4 proteins [] Back     alignment and domain information
>cd07684 F-BAR_srGAP3 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating Protein 3 Back     alignment and domain information
>KOG4429|consensus Back     alignment and domain information
>smart00055 FCH Fes/CIP4 homology domain Back     alignment and domain information
>cd07307 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature Back     alignment and domain information
>cd07598 BAR_FAM92 The Bin/Amphiphysin/Rvs (BAR) domain of Family with sequence similarity 92 (FAM92) Back     alignment and domain information
>cd07647 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins Back     alignment and domain information
>PF03114 BAR: BAR domain; InterPro: IPR004148 Endocytosis and intracellular transport involve several mechanistic steps: (1) for the internalisation of cargo molecules, the membrane needs to bend to form a vesicular structure, which requires membrane curvature and a rearrangement of the cytoskeleton; (2) following its formation, the vesicle has to be pinched off the membrane; (3) the cargo has to be subsequently transported through the cell and the vesicle must fuse with the correct cellular compartment Back     alignment and domain information
>PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking Back     alignment and domain information
>cd07657 F-BAR_Fes_Fer The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma) and Fer (Fes related) tyrosine kinases Back     alignment and domain information
>cd07679 F-BAR_PACSIN2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2) Back     alignment and domain information
>cd07596 BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins Back     alignment and domain information
>cd07671 F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1 Back     alignment and domain information
>cd07675 F-BAR_FNBP1L The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 1-Like Back     alignment and domain information
>cd07655 F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins Back     alignment and domain information
>cd07624 BAR_SNX7_30 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 7 and 30 Back     alignment and domain information
>cd07658 F-BAR_NOSTRIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Nitric Oxide Synthase TRaffic INducer (NOSTRIN) Back     alignment and domain information
>cd07623 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2 Back     alignment and domain information
>cd07604 BAR_ASAPs The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing proteins Back     alignment and domain information
>cd07307 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature Back     alignment and domain information
>cd07664 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2 Back     alignment and domain information
>cd07613 BAR_Endophilin_A1 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A1 Back     alignment and domain information
>cd07640 BAR_ASAP3 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 3 Back     alignment and domain information
>cd07593 BAR_MUG137_fungi The Bin/Amphiphysin/Rvs (BAR) domain of Schizosaccharomyces pombe Meiotically Up-regulated Gene 137 protein and similar proteins Back     alignment and domain information
>cd07641 BAR_ASAP1 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1 Back     alignment and domain information
>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1 Back     alignment and domain information
>cd07651 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Schizosaccharomyces pombe Cdc15, and similar proteins Back     alignment and domain information
>cd07676 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17 Back     alignment and domain information
>cd07660 BAR_Arfaptin The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin Back     alignment and domain information
>cd07595 BAR_RhoGAP_Rich-like The Bin/Amphiphysin/Rvs (BAR) domain of Rich-like Rho GTPase Activating Proteins Back     alignment and domain information
>cd07605 I-BAR_IMD Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), a dimerization module that binds and bends membranes Back     alignment and domain information
>PF06456 Arfaptin: Arfaptin-like domain; InterPro: IPR010504 Arfaptin interacts with ARF1, a small GTPase involved in vesicle budding at the Golgi complex and immature secretory granules Back     alignment and domain information
>cd07648 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins Back     alignment and domain information
>cd07645 I-BAR_IMD_BAIAP2L1 Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 1 Back     alignment and domain information
>cd07653 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins Back     alignment and domain information
>cd07659 BAR_PICK1 The Bin/Amphiphysin/Rvs (BAR) domain of Protein Interacting with C Kinase 1 Back     alignment and domain information
>cd07672 F-BAR_PSTPIP2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 2 Back     alignment and domain information
>PF08397 IMD: IRSp53/MIM homology domain; InterPro: IPR013606 The IMD (IRSp53 and MIM (missing in metastases) homology) domain is a BAR-like domain of approximately 250 amino acids found at the N-terminal in the insulin receptor tyrosine kinase substrate p53 (IRSp53) and in the evolutionarily related IRSp53/MIM family Back     alignment and domain information
>cd07649 F-BAR_GAS7 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7 Back     alignment and domain information
>cd07615 BAR_Endophilin_A3 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A3 Back     alignment and domain information
>PF06730 FAM92: FAM92 protein; InterPro: IPR009602 This family consists of several eukaryotic sequences of around 270 residues in length Back     alignment and domain information
>cd07680 F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) Back     alignment and domain information
>cd07681 F-BAR_PACSIN3 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3) Back     alignment and domain information
>cd07646 I-BAR_IMD_IRSp53 Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Insulin Receptor tyrosine kinase Substrate p53 Back     alignment and domain information
>cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p Back     alignment and domain information
>cd07673 F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 2 protein Back     alignment and domain information
>cd07619 BAR_Rich2 The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP interacting with CIP4 homologs protein 2 Back     alignment and domain information
>cd07674 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 1 protein Back     alignment and domain information
>cd07656 F-BAR_srGAP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating Proteins Back     alignment and domain information
>KOG2398|consensus Back     alignment and domain information
>cd07621 BAR_SNX5_6 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 5 and 6 Back     alignment and domain information
>cd07618 BAR_Rich1 The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP interacting with CIP4 homologs protein 1 Back     alignment and domain information
>cd07623 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2 Back     alignment and domain information
>cd00011 BAR_Arfaptin_like The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin-like proteins, a dimerization module that binds and bends membranes Back     alignment and domain information
>cd07592 BAR_Endophilin_A The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A Back     alignment and domain information
>KOG3565|consensus Back     alignment and domain information
>KOG3771|consensus Back     alignment and domain information
>cd07666 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 7 Back     alignment and domain information
>cd07634 BAR_GAP10-like The Bin/Amphiphysin/Rvs (BAR) domain of Rho GTPase activating protein 10-like Back     alignment and domain information
>cd07664 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2 Back     alignment and domain information
>cd07644 I-BAR_IMD_BAIAP2L2 Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 2 Back     alignment and domain information
>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1 Back     alignment and domain information
>cd07662 BAR_SNX6 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6 Back     alignment and domain information
>cd07606 BAR_SFC_plant The Bin/Amphiphysin/Rvs (BAR) domain of the plant protein SCARFACE (SFC) Back     alignment and domain information
>cd07642 BAR_ASAP2 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 2 Back     alignment and domain information
>KOG2856|consensus Back     alignment and domain information
>cd07663 BAR_SNX5 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 5 Back     alignment and domain information
>smart00721 BAR BAR domain Back     alignment and domain information
>cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p Back     alignment and domain information
>cd07620 BAR_SH3BP1 The Bin/Amphiphysin/Rvs (BAR) domain of SH3-domain Binding Protein 1 Back     alignment and domain information
>cd07630 BAR_SNX_like The Bin/Amphiphysin/Rvs (BAR) domain of uncharacterized Sorting Nexins Back     alignment and domain information
>cd07601 BAR_APPL The Bin/Amphiphysin/Rvs (BAR) domain of Adaptor protein, Phosphotyrosine interaction, PH domain and Leucine zipper containing proteins Back     alignment and domain information
>KOG1118|consensus Back     alignment and domain information
>cd07616 BAR_Endophilin_B1 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1 Back     alignment and domain information
>cd07643 I-BAR_IMD_MIM Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis Back     alignment and domain information
>cd07617 BAR_Endophilin_B2 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B2 Back     alignment and domain information
>cd07663 BAR_SNX5 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 5 Back     alignment and domain information
>PF03114 BAR: BAR domain; InterPro: IPR004148 Endocytosis and intracellular transport involve several mechanistic steps: (1) for the internalisation of cargo molecules, the membrane needs to bend to form a vesicular structure, which requires membrane curvature and a rearrangement of the cytoskeleton; (2) following its formation, the vesicle has to be pinched off the membrane; (3) the cargo has to be subsequently transported through the cell and the vesicle must fuse with the correct cellular compartment Back     alignment and domain information
>cd07621 BAR_SNX5_6 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 5 and 6 Back     alignment and domain information
>KOG0250|consensus Back     alignment and domain information
>cd07600 BAR_Gvp36 The Bin/Amphiphysin/Rvs (BAR) domain of Saccharomyces cerevisiae Golgi vesicle protein of 36 kDa and similar proteins Back     alignment and domain information
>cd07639 BAR_ACAP1 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 1 Back     alignment and domain information
>PF05276 SH3BP5: SH3 domain-binding protein 5 (SH3BP5); InterPro: IPR007940 The SH3 domain-binding protein inhibits the auto and transphophorylation of BTK and acts as a negative regulator of BTK-related signalling in B cells Back     alignment and domain information
>cd07662 BAR_SNX6 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6 Back     alignment and domain information
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function Back     alignment and domain information
>cd07633 BAR_OPHN1 The Bin/Amphiphysin/Rvs (BAR) domain of Oligophrenin-1 Back     alignment and domain information
>KOG0521|consensus Back     alignment and domain information
>cd07603 BAR_ACAPs The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing proteins Back     alignment and domain information
>cd07602 BAR_RhoGAP_OPHN1-like The Bin/Amphiphysin/Rvs (BAR) domain of Oligophrenin1-like Rho GTPase Activating Proteins Back     alignment and domain information
>cd07591 BAR_Rvs161p The Bin/Amphiphysin/Rvs (BAR) domain of Saccharomyces cerevisiae Reduced viability upon starvation protein 161 and similar proteins Back     alignment and domain information
>KOG1924|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
2v0o_A276 Fcho2 F-Bar Domain Length = 276 2e-34
>pdb|2V0O|A Chain A, Fcho2 F-Bar Domain Length = 276 Back     alignment and structure 
Iteration: 1

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 1   ANIEENNSKLFGKLAKQSGGS---GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVC 57
           A IEE  S+   KLAK +      GTFAP+W V KTS EK+A   + +++K+ +L+K+V 
Sbjct: 45  ATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQ 104
Query: 58  KYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKD 117
           KY EE  K HK  KEE   TLE VQTIQS T  LQK+K+ Y  KC E ++L+++  + ++
Sbjct: 105 KYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQRE 164
Query: 118 LEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMS-TSCKIRNDDRDHKIHV 167
           +EKA +K KKA + YK  V+KYAL K DFE++M+ T+ K ++ +  H IH+
Sbjct: 165 IEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHI 215

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
2v0o_A276 FCHO2, FCH domain only protein 2; lipid-binding pr 2e-27
3g9h_A 328 Suppressor of yeast profilin deletion; SYP1, MU, a 3e-19
3haj_A486 Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, 9e-18
3qwe_A279 GMIP, GEM-interacting protein; structural genomics 2e-15
3i2w_A290 Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocyt 3e-15
3abh_A312 Pacsin2, protein kinase C and casein kinase substr 5e-15
3m3w_A320 Pacsin3, protein kinase C and casein kinase II sub 7e-15
3aco_A350 Pacsin2, protein kinase C and casein kinase substr 7e-15
2x3v_A337 Syndapin I, protein kinase C and casein kinase sub 6e-14
2efl_A305 Formin-binding protein 1; EFC domain, structural g 2e-13
2efk_A301 CDC42-interacting protein 4; EFC domain, structura 1e-12
4dyl_A406 Tyrosine-protein kinase FES/FPS; structural genomi 2e-09
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens} Length = 276 Back     alignment and structure
 Score =  109 bits (272), Expect = 2e-27
 Identities = 82/204 (40%), Positives = 115/204 (56%), Gaps = 10/204 (4%)

Query: 1   ANIEENNSKLFGKLAKQSGGS---GTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVC 57
           A IEE  S+   KLAK +      GTFAP+W V KTS EK+A   + +++K+ +L+K+V 
Sbjct: 45  ATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQ 104

Query: 58  KYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKD 117
           KY EE  K HK  KEE   TLE VQTIQS T  LQK+K+ Y  KC E ++L+++  + ++
Sbjct: 105 KYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQRE 164

Query: 118 LEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIRND---DRDHKIHVEIK---- 170
           +EKA +K KKA + YK  V+KYAL K DFE++M+ + +   D        I   I     
Sbjct: 165 IEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSN 224

Query: 171 PLSANTNQISASVDELRVTAGNLT 194
            +     QI    +E      N T
Sbjct: 225 AIKEIHLQIGQVHEEFINNMANTT 248
>3g9h_A Suppressor of yeast profilin deletion; SYP1, MU, adaptor, endocytosis, phosphoprotein; HET: 1PG; 2.80A {Saccharomyces cerevisiae} Length = 328 Back     alignment and structure
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486 Back     alignment and structure
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens} Length = 279 Back     alignment and structure
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster} Length = 290 Back     alignment and structure
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A Length = 312 Back     alignment and structure
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3qe6_A Length = 320 Back     alignment and structure
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens} Length = 350 Back     alignment and structure
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A Length = 337 Back     alignment and structure
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4 Length = 305 Back     alignment and structure
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4 Length = 301 Back     alignment and structure
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens} Length = 406 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
2v0o_A276 FCHO2, FCH domain only protein 2; lipid-binding pr 100.0
3m3w_A320 Pacsin3, protein kinase C and casein kinase II sub 99.96
3abh_A312 Pacsin2, protein kinase C and casein kinase substr 99.96
3aco_A350 Pacsin2, protein kinase C and casein kinase substr 99.95
3i2w_A290 Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocyt 99.95
2x3v_A337 Syndapin I, protein kinase C and casein kinase sub 99.95
3haj_A486 Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, 99.95
2efl_A305 Formin-binding protein 1; EFC domain, structural g 99.94
2efk_A301 CDC42-interacting protein 4; EFC domain, structura 99.94
4dyl_A406 Tyrosine-protein kinase FES/FPS; structural genomi 99.93
3g9g_A287 Suppressor of yeast profilin deletion; SYP1, BAR d 99.73
3qwe_A279 GMIP, GEM-interacting protein; structural genomics 99.55
3g9h_A 328 Suppressor of yeast profilin deletion; SYP1, MU, a 99.54
1zww_A256 SH3-containing GRB2-like protein 2; coiled coil, t 95.2
2z0v_A240 SH3-containing GRB2-like protein 3; helix bundle, 94.94
3abh_A312 Pacsin2, protein kinase C and casein kinase substr 94.35
2efk_A301 CDC42-interacting protein 4; EFC domain, structura 94.23
3haj_A486 Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, 93.0
2efl_A305 Formin-binding protein 1; EFC domain, structural g 92.66
4dyl_A406 Tyrosine-protein kinase FES/FPS; structural genomi 92.61
2ykt_A253 Brain-specific angiogenesis inhibitor 1-associate 92.19
3ok8_A222 Brain-specific angiogenesis inhibitor 1-associate 91.75
2q12_A265 DIP13 alpha, DCC-interacting protein 13 alpha; APP 91.53
2d1l_A253 Metastasis suppressor protein 1; IRSP53, actin bin 90.84
2x3v_A337 Syndapin I, protein kinase C and casein kinase sub 90.44
1i4d_A224 Arfaptin 2, partner of RAC1; coiled coil, G-protei 89.2
2v71_A189 Nuclear distribution protein NUDE-like 1; developm 88.55
1uru_A244 Amphiphysin; endocytosis, coiled-coil, membrane cu 87.86
3i2w_A290 Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocyt 87.57
2v0o_A276 FCHO2, FCH domain only protein 2; lipid-binding pr 87.38
2q13_A385 DCC-interacting protein 13 alpha; APPL1, BAR domai 85.46
4h8s_A407 DCC-interacting protein 13-beta; BAR domain, pleck 84.17
3oja_A487 Leucine-rich immune molecule 1; coiled-coil, helix 81.43
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=8.2e-33  Score=263.38  Aligned_cols=197  Identities=42%  Similarity=0.610  Sum_probs=184.8

Q ss_pred             ChhhHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCch
Q psy17650          1 ANIEENNSKLFGKLAKQSGG---SGTFAPLWQVLKTSIEKIATVQVKMMQKVNDLVKDVCKYTEELQKKHKLVKEEQGPT   77 (396)
Q Consensus         1 A~IEe~YAKsL~KLAKka~~---~GTl~~sW~~lk~e~Ekla~~H~~La~kL~EliK~l~~f~eeQkk~hKk~ke~~~~~   77 (396)
                      |.||+.|||.|.+||+++.+   +|||..+|+.|+.++|++|.+|.++++.|++++++|..|.+++++.||+++++++++
T Consensus        45 a~iE~eYak~L~kLa~~~~~~~~~gs~~~~w~~~~~~~e~~a~~h~~~a~~l~~~~~~l~~~~~~~~~~rK~~~~~~~~~  124 (276)
T 2v0o_A           45 ATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGT  124 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCCCSSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            57999999999999999966   999999999999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17650         78 LEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRDNGSAKDLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIR  157 (396)
Q Consensus        78 ~ea~k~~q~~~~~l~KaKk~Y~~~CkE~E~lrke~~s~KeieKa~~K~kKA~e~Yk~~v~kye~~r~~wE~~m~~~cq~F  157 (396)
                      .++++.|+.....+.|+|+.|+++|+++|++++++.++++++|++.|+++|.++|..+|.+|+..+.+|+..|...|+.|
T Consensus       125 ~~~~~~~~~~~~~l~Kak~~Y~~~c~e~e~~~~~~~s~k~~eK~~~k~~ka~~~Y~~~v~~~n~~~~~~~~~~~~~~~~l  204 (276)
T 2v0o_A          125 LEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKF  204 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             hhccccchhhhhccCCC--------CCcchHhHHHHHHHhhcccccCCc
Q psy17650        158 NDDRDHKIHVEIKPLSA--------NTNQISASVDELRVTAGNLTLSPL  198 (396)
Q Consensus       158 qd~E~~Ri~v~ik~~~~--------~~~~~~as~eELr~sIeni~v~~~  198 (396)
                      |+.|++|+. .++.+++        .++.+.+++++|+.+|++|+++..
T Consensus       205 Q~le~~R~~-~lk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~D  252 (276)
T 2v0o_A          205 QDIEETHLI-HIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESL  252 (276)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhCCHHHH
Confidence            999999996 5666663        245777899999999999998865
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A Back     alignment and structure
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A Back     alignment and structure
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens} Back     alignment and structure
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster} Back     alignment and structure
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A Back     alignment and structure
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Back     alignment and structure
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4 Back     alignment and structure
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4 Back     alignment and structure
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens} Back     alignment and structure
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>3g9h_A Suppressor of yeast profilin deletion; SYP1, MU, adaptor, endocytosis, phosphoprotein; HET: 1PG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A Back     alignment and structure
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens} Back     alignment and structure
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A Back     alignment and structure
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4 Back     alignment and structure
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Back     alignment and structure
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4 Back     alignment and structure
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens} Back     alignment and structure
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A Back     alignment and structure
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus} Back     alignment and structure
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A Back     alignment and structure
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus} Back     alignment and structure
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A Back     alignment and structure
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A* Back     alignment and structure
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Back     alignment and structure
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1 Back     alignment and structure
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster} Back     alignment and structure
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens} Back     alignment and structure
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Back     alignment and structure
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} Back     alignment and structure
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 396
d2efla1288 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP 9e-11
d2efka1279 a.238.1.4 (A:10-288) CDC42-interacting protein 4, 7e-10
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: FCH domain
domain: Formin-binding protein 1, FNBP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 9e-11
 Identities = 26/178 (14%), Positives = 67/178 (37%), Gaps = 15/178 (8%)

Query: 1   ANIEENNSKLFGKLAKQSGGS----------GTFAPLWQVLKTSIEKIATVQVKMMQKV- 49
             IE + +K    L+K+               T    +      +   A     + + + 
Sbjct: 36  TEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQHEVISENMA 95

Query: 50  NDLVKDVCKYTEELQKKHKLVKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLR 109
           + ++ D+ +Y +EL+++ K    +     +  Q I++    L+ +K  + + C+E D+ +
Sbjct: 96  SQIIVDLARYVQELKQERKSNFHD---GRKAQQHIETCWKQLESSKRRFERDCKEADRAQ 152

Query: 110 RDNGSAK-DLEKAELKVKKAQEDYKTIVDKYALIKEDFEKRMSTSCKIRNDDRDHKIH 166
           +       D+   +  V+KA++  +         K D+   +      +++     I 
Sbjct: 153 QYFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIP 210
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
d2efla1288 Formin-binding protein 1, FNBP1 {Human (Homo sapie 99.87
d2efka1279 CDC42-interacting protein 4, CIP4 {Human (Homo sap 99.84
d2d4ca1237 Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]} 96.99
d1y2oa1248 BAP2/IRSp53 N-terminal domain {Human (Homo sapiens 95.95
d1urua_217 Amphiphysin {Fruit fly (Drosophila melanogaster) [ 95.61
d1i4da_200 Arfaptin, Rac-binding fragment {Human (Homo sapien 93.7
d1i4da_200 Arfaptin, Rac-binding fragment {Human (Homo sapien 92.15
d2elba1268 DCC-interacting protein 13-alpha, APPL1 {Human (Ho 90.96
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: FCH domain
domain: Formin-binding protein 1, FNBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2e-21  Score=180.92  Aligned_cols=194  Identities=16%  Similarity=0.244  Sum_probs=166.0

Q ss_pred             ChhhHHHHHHHHHHHHHhCC----------CCChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhh
Q psy17650          1 ANIEENNSKLFGKLAKQSGG----------SGTFAPLWQVLKTSIEKIATVQVKMMQKV-NDLVKDVCKYTEELQKKHKL   69 (396)
Q Consensus         1 A~IEe~YAKsL~KLAKka~~----------~GTl~~sW~~lk~e~Ekla~~H~~La~kL-~EliK~l~~f~eeQkk~hKk   69 (396)
                      |.||+.|||+|.+|++++.+          .||+..+|..++.+++.+|..|..++..| .+++.++..|.+++.+.+|+
T Consensus        36 a~iE~eYak~L~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~h~~~a~~l~~~i~~~l~~~~~~~~~~~K~  115 (288)
T d2efla1          36 TEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQERKS  115 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCC-------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57999999999999998754          78999999999999999999999999999 67889999999999999999


Q ss_pred             hhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------cCChhHHHHHHHHHHh-------HHHHHHH
Q psy17650         70 VKEEQGPTLEIVQTIQSTTLVLQKAKDVYLQKCEELDKLRRD--------NGSAKDLEKAELKVKK-------AQEDYKT  134 (396)
Q Consensus        70 ~ke~~~~~~ea~k~~q~~~~~l~KaKk~Y~~~CkE~E~lrke--------~~s~KeieKa~~K~kK-------A~e~Yk~  134 (396)
                      +.+.   ..+..+.++.....+.|+|+.|+..|+++++++..        +.++++++|+..++++       |..+|..
T Consensus       116 ~~~~---~~k~~k~~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~~~~~~~~~~K~~~k~~~~~~~~~~a~~~Y~~  192 (288)
T d2efla1         116 NFHD---GRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSS  192 (288)
T ss_dssp             HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8764   56788889999999999999999999999887531        3577888876665544       5568999


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHhhccccchhhhhccCCC--------CCcchHhHHHHHHHhhcccccCCc
Q psy17650        135 IVDKYALIKEDF-EKRMSTSCKIRNDDRDHKIHVEIKPLSA--------NTNQISASVDELRVTAGNLTLSPL  198 (396)
Q Consensus       135 ~v~kye~~r~~w-E~~m~~~cq~Fqd~E~~Ri~v~ik~~~~--------~~~~~~as~eELr~sIeni~v~~~  198 (396)
                      +|..|+..+.+| +.+|...++.||+.+.+|+. .++..+.        .+......++.|...+++|++...
T Consensus       193 ~v~~~n~~~~~~~~~~~~~~~~~~q~~e~~r~~-~~k~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~id~~~D  264 (288)
T d2efla1         193 ILQKFNHEQHEYYHTHIPNIFQKIQEMEERRIV-RMGESMKTYAEVDRQVIPIIGKCLDGIVKAAESIDQKND  264 (288)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCHHHH
Confidence            999999999996 67899999999998888885 4566553        144777889999999999998765
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure