Psyllid ID: psy17653


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MARHKEVATWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
ccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHccccEEEccHHHHHHHHccccccccccccccccccccccEEEEcccHHHHHHHHHHHHccccccccHHHHHHcccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccHHHcccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHccc
cccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHEHHHHHcccHcccHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccHHEEEEHHHHHccccccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHEHHEcccHHHHHHHHHHcHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MARHKEVATWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVwrdeglvrglyAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASffssftlcpTELLKIQLQAAHEEATklgntskinlglfgltkqIIRQdglrglfkgfgptvarempgyfvfFGGYEatrtllapadkpkeecgtsdcdefdfdsrkinlglfgltkQIIRQdglrglfkgfgptvarempgyfvfFGGYEatrtllapadkpkeecgALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYnglqptlirtiPASAVLFLVYEYSKKIMNTLFL
marhkevatwksgvidftagSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
MARHKEVATWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
******VATWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPA******CGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQAS*QQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTL**
****************FTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISL*********MSILANASAGCLASFFSSFTLCPTELLKIQLQ******************LFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATR*****************TMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
********TWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPA**********DCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
********TWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATK*GNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooo
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MARHKEVATWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNTLFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query379 2.2.26 [Sep-21-2011]
Q9WVD5301 Mitochondrial ornithine t yes N/A 0.688 0.867 0.397 2e-48
Q9Y619301 Mitochondrial ornithine t yes N/A 0.688 0.867 0.393 2e-48
Q9BXI2301 Mitochondrial ornithine t no N/A 0.688 0.867 0.379 4e-43
Q93XM7300 Mitochondrial carnitine/a yes N/A 0.659 0.833 0.331 2e-29
Q54BM3300 Mitochondrial substrate c yes N/A 0.693 0.876 0.286 2e-29
Q6J329310 Solute carrier family 25 no N/A 0.804 0.983 0.285 1e-25
Q54FE6285 Mitochondrial substrate c no N/A 0.664 0.884 0.297 2e-25
Q6IS41310 Solute carrier family 25 no N/A 0.804 0.983 0.269 1e-22
Q27257312 Protein dif-1 OS=Caenorha no N/A 0.646 0.785 0.291 7e-21
Q10248298 Uncharacterized mitochond yes N/A 0.643 0.818 0.292 1e-20
>sp|Q9WVD5|ORNT1_MOUSE Mitochondrial ornithine transporter 1 OS=Mus musculus GN=Slc25a15 PE=2 SV=1 Back     alignment and function desciption
 Score =  192 bits (489), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 157/287 (54%), Gaps = 26/287 (9%)

Query: 15  IDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGTIP 74
           ID TAG+ GG A V  GQP DT+KVKMQT+P LY  + DCC K +   G  RG Y GT P
Sbjct: 11  IDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLTDCCLKTYSQVGF-RGFYKGTSP 69

Query: 75  AILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTEL 134
           A++AN+AENSVLF CYGFCQ+++    G      +S L NA+AG  AS F++  LCPTEL
Sbjct: 70  ALIANIAENSVLFMCYGFCQQVVRKVVGLDQQAKLSDLQNAAAGSFASAFAALVLCPTEL 129

Query: 135 LKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFF 194
           +K +LQ  +E  T  G  +     ++ + K+I R+DG  G + G   T+ RE+PGYF FF
Sbjct: 130 VKCRLQTMYEMETS-GKIAASQNTVWSVVKEIFRKDGPLGFYHGLSSTLLREVPGYFFFF 188

Query: 195 GGYEATRTLLAPADKPKEECG--------------------TSDCDEFDFDSRKINLGLF 234
           GGYE +R+  A + + K+E G                      DC +       +     
Sbjct: 189 GGYELSRSFFA-SGRSKDELGPVPLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTGKQT 247

Query: 235 GLTK---QIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLL 278
           GL +    I++ +G+  L+ G  PT+ R  P     F  YE +R L+
Sbjct: 248 GLVRTFLSIVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLM 294




Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix.
Mus musculus (taxid: 10090)
>sp|Q9Y619|ORNT1_HUMAN Mitochondrial ornithine transporter 1 OS=Homo sapiens GN=SLC25A15 PE=1 SV=1 Back     alignment and function description
>sp|Q9BXI2|ORNT2_HUMAN Mitochondrial ornithine transporter 2 OS=Homo sapiens GN=SLC25A2 PE=1 SV=3 Back     alignment and function description
>sp|Q93XM7|MCAT_ARATH Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1 Back     alignment and function description
>sp|Q54BM3|MCFG_DICDI Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1 Back     alignment and function description
>sp|Q6J329|S2547_RAT Solute carrier family 25 member 47 OS=Rattus norvegicus GN=Slc24a47 PE=2 SV=1 Back     alignment and function description
>sp|Q54FE6|MCFS_DICDI Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1 Back     alignment and function description
>sp|Q6IS41|S2547_MOUSE Solute carrier family 25 member 47 OS=Mus musculus GN=Slc25a47 PE=2 SV=2 Back     alignment and function description
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function description
>sp|Q10248|YD1K_SCHPO Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4G9.20c PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
357607271364 mitochondrial ornithine transporter [Dan 0.730 0.760 0.5 5e-74
242004821311 mitochondrial ornithine transporter, put 0.715 0.871 0.476 3e-69
157117916304 mitochondrial ornithine transporter [Aed 0.717 0.894 0.471 2e-68
91080329304 PREDICTED: similar to mitochondrial orni 0.733 0.914 0.46 3e-68
332027438337 Mitochondrial ornithine transporter 1 [A 0.707 0.795 0.474 1e-66
307172383323 Mitochondrial ornithine transporter 1 [C 0.725 0.851 0.473 3e-65
346471837323 hypothetical protein [Amblyomma maculatu 0.715 0.839 0.469 4e-65
383852109345 PREDICTED: mitochondrial ornithine trans 0.707 0.776 0.465 2e-64
350415773317 PREDICTED: mitochondrial ornithine trans 0.707 0.845 0.453 2e-64
380026315312 PREDICTED: LOW QUALITY PROTEIN: mitochon 0.722 0.878 0.444 3e-64
>gi|357607271|gb|EHJ65426.1| mitochondrial ornithine transporter [Danaus plexippus] Back     alignment and taxonomy information
 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 188/298 (63%), Gaps = 21/298 (7%)

Query: 1   MARHKEVATWKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWR 60
           MA        KSG+IDFTAGSLGGVA+VYVGQPLDTVKVKMQT+P LY  M  C K+  R
Sbjct: 62  MAHSGSSGNIKSGIIDFTAGSLGGVAVVYVGQPLDTVKVKMQTFPHLYKGMYHCLKQTLR 121

Query: 61  DEGLVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCL 120
           ++G+VRGLYAGT PAI+ANVAENSVLFA YG+CQK +   TG ++V+ +S L NASAG L
Sbjct: 122 NDGVVRGLYAGTTPAIMANVAENSVLFAAYGYCQKFMCHITGAESVDQLSTLGNASAGFL 181

Query: 121 ASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFG 180
           ASFFSSFTLCPTEL+K QLQA   E    G+ S + L    LT+QI +Q G++GLF+G  
Sbjct: 182 ASFFSSFTLCPTELIKCQLQAM-REVNVSGSQSAVRLTPLQLTQQIFKQYGIQGLFRGLV 240

Query: 181 PTVAREMPGYFVFFGGYEATRTLLAPADKPKEECG--------------------TSDCD 220
           PT+ REMPGYF FFGGYE TR LLA   + K++ G                     SD  
Sbjct: 241 PTIMREMPGYFFFFGGYEGTRELLAKPGQSKDDIGPWRTMVAGAVGGLVLWTVIFPSDVI 300

Query: 221 EFDFDSRKINLGLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLL 278
           +        +     +  +I+R++G   L+ G  PT+ R +P     F  YE ++ L+
Sbjct: 301 KSRVQISNKSQKFLTVGMEIVRKEGALALYNGLKPTLVRTIPATAALFVVYEYSKKLM 358




Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004821|ref|XP_002423275.1| mitochondrial ornithine transporter, putative [Pediculus humanus corporis] gi|212506277|gb|EEB10537.1| mitochondrial ornithine transporter, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157117916|ref|XP_001653099.1| mitochondrial ornithine transporter [Aedes aegypti] gi|108875940|gb|EAT40165.1| AAEL008096-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|91080329|ref|XP_974555.1| PREDICTED: similar to mitochondrial ornithine transporter [Tribolium castaneum] gi|270005604|gb|EFA02052.1| hypothetical protein TcasGA2_TC007680 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332027438|gb|EGI67521.1| Mitochondrial ornithine transporter 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307172383|gb|EFN63849.1| Mitochondrial ornithine transporter 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|346471837|gb|AEO35763.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|383852109|ref|XP_003701571.1| PREDICTED: mitochondrial ornithine transporter 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|350415773|ref|XP_003490747.1| PREDICTED: mitochondrial ornithine transporter 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380026315|ref|XP_003696897.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial ornithine transporter 1-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
FB|FBgn0030218459 CG1628 [Drosophila melanogaste 0.535 0.442 0.519 7.8e-60
RGD|1311488338 Slc25a15 "solute carrier famil 0.522 0.585 0.477 5.4e-59
ZFIN|ZDB-GENE-060526-35307 slc25a15b "solute carrier fami 0.525 0.648 0.5 4.2e-55
UNIPROTKB|E2R9M3301 SLC25A15 "Uncharacterized prot 0.522 0.657 0.487 5.4e-55
UNIPROTKB|F1RME0301 SLC25A2 "Uncharacterized prote 0.522 0.657 0.487 2.3e-54
UNIPROTKB|Q2KHW4301 SLC25A15 "Uncharacterized prot 0.522 0.657 0.482 7.8e-54
MGI|MGI:1342274301 Slc25a15 "solute carrier famil 0.522 0.657 0.482 2e-53
UNIPROTKB|D4A575301 Slc25a15 "Solute carrier famil 0.522 0.657 0.477 3.3e-53
UNIPROTKB|J9P5G2268 SLC25A15 "Uncharacterized prot 0.382 0.541 0.469 6.8e-49
UNIPROTKB|Q9Y619301 SLC25A15 "Mitochondrial ornith 0.522 0.657 0.487 3.7e-48
FB|FBgn0030218 CG1628 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 548 (198.0 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
 Identities = 106/204 (51%), Positives = 140/204 (68%)

Query:    13 GVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQLYSSMIDCCKKVWRDEGLVRGLYAGT 72
             G+IDF AGSLGG A VYV QPLDTVKVK+QT+P+ Y  M+DC    +R +G++RGLYAG+
Sbjct:   169 GLIDFLAGSLGGAAQVYVSQPLDTVKVKLQTFPEAYRGMLDCFLSTYRKDGVLRGLYAGS 228

Query:    73 IPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPT 132
             +PA+ ANVAENSVLFA YG CQK ++   G +   D++ + NA AG LA+ FS+ TLCPT
Sbjct:   229 VPAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAGSLAACFSTLTLCPT 288

Query:   133 ELLKIQLQAAHEEATKLGNTSKINLGL-FGLTKQIIRQDGLRGLFKGFGPTVAREMPGYF 191
             EL+K +LQA  E    +      ++   + LT+ I R +G+RG ++G   T  REMPGYF
Sbjct:   289 ELIKCKLQALREMKNFVEPAHPQDIRTPWTLTRYIWRTEGIRGFYRGLSSTFLREMPGYF 348

Query:   192 VFFGGYEATRTLLAPADKPKEECG 215
              FFG YE TR LL   D+ K++ G
Sbjct:   349 FFFGSYEGTRELLRRDDQSKDDIG 372


GO:0000064 "L-ornithine transmembrane transporter activity" evidence=ISS;NAS
GO:0022857 "transmembrane transporter activity" evidence=ISS;NAS
GO:0005743 "mitochondrial inner membrane" evidence=ISS;NAS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0000066 "mitochondrial ornithine transport" evidence=ISS
GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS
GO:0003333 "amino acid transmembrane transport" evidence=ISS
RGD|1311488 Slc25a15 "solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060526-35 slc25a15b "solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2R9M3 SLC25A15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RME0 SLC25A2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KHW4 SLC25A15 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1342274 Slc25a15 "solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|D4A575 Slc25a15 "Solute carrier family 25 (Mitochondrial carrier; ornithine transporter) member 15" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P5G2 SLC25A15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y619 SLC25A15 "Mitochondrial ornithine transporter 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93XM7MCAT_ARATHNo assigned EC number0.33120.65960.8333yesN/A
Q9WVD5ORNT1_MOUSENo assigned EC number0.39720.68860.8671yesN/A
Q9Y619ORNT1_HUMANNo assigned EC number0.39370.68860.8671yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-18
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-11
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 7e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-05
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-04
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-04
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.004
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 82.3 bits (204), Expect = 2e-19
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)

Query: 289 GALATMAAGGVGGIALWTVIFPVDVIKSRVQASSQQNTA---NFVTQMTDIVKKEGVLAL 345
             LA++ AGG+ G    TV +P+DV+K+R+Q+S+   +      +     I K+EG+  L
Sbjct: 4   SFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGL 63

Query: 346 YNGLQPTLIRTIPASAVLFLVYEYSKKIMNT 376
           Y GL P L+R  PA+A+ F  YE  KK++  
Sbjct: 64  YKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759|consensus286 100.0
KOG0758|consensus297 100.0
KOG0757|consensus319 100.0
KOG0760|consensus302 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761|consensus361 100.0
KOG0754|consensus294 100.0
KOG0762|consensus311 100.0
KOG0768|consensus323 100.0
KOG0763|consensus301 100.0
KOG0765|consensus333 100.0
KOG0751|consensus694 100.0
KOG0766|consensus297 100.0
KOG0755|consensus320 100.0
KOG0749|consensus298 100.0
KOG0036|consensus463 100.0
KOG0756|consensus299 100.0
KOG0769|consensus308 100.0
KOG0770|consensus353 100.0
KOG0750|consensus304 100.0
KOG0767|consensus333 100.0
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.98
KOG0753|consensus317 99.97
KOG0768|consensus323 99.97
KOG0760|consensus302 99.97
KOG0762|consensus311 99.97
KOG0757|consensus319 99.96
PTZ00168259 mitochondrial carrier protein; Provisional 99.96
KOG0759|consensus286 99.96
KOG0758|consensus297 99.96
KOG0761|consensus361 99.95
KOG0754|consensus294 99.94
KOG0751|consensus694 99.94
KOG0770|consensus 353 99.93
KOG0036|consensus463 99.92
KOG0750|consensus304 99.92
KOG0756|consensus299 99.92
KOG0765|consensus333 99.92
KOG0763|consensus301 99.91
KOG2745|consensus321 99.9
KOG0755|consensus320 99.9
KOG0766|consensus297 99.9
KOG0749|consensus298 99.9
KOG1519|consensus297 99.89
KOG0769|consensus 308 99.89
KOG0767|consensus333 99.89
KOG2954|consensus427 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.61
KOG2745|consensus321 99.48
KOG1519|consensus297 99.39
KOG2954|consensus427 98.37
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=5.7e-56  Score=379.56  Aligned_cols=279  Identities=27%  Similarity=0.443  Sum_probs=243.6

Q ss_pred             HHHHHhhhhhhHHHHhhcChHHHHHHHHhcCC------CCCCcHHHHHHHHHHhhCcccccccchhHhHhHHhHHHHHHH
Q psy17653         14 VIDFTAGSLGGVALVYVGQPLDTVKVKMQTYP------QLYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAENSVLF   87 (379)
Q Consensus        14 ~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~------~~~~~~~~~~~~i~~~~G~~~~ly~G~~~~l~~~~~~~~i~~   87 (379)
                      +.++++|+++|+++.++.||||++|+|+|++.      +.|++++++++.|+|.||+ +|||+|+.|.+++..+.+++||
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~-rGLY~Gl~P~v~G~~~sWgiYF   84 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGL-RGLYRGLSPNVLGSAPSWGLYF   84 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhH-HHHhccCcHHHHhchhhHHHHH
Confidence            34559999999999999999999999999982      4789999999999999999 9999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHhHhhhcccHHHHHHHHHhcchhhhhcCCCccccccHHHHHHHHH
Q psy17653         88 ACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQII  167 (379)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~i~  167 (379)
                      .+||.+|.++....+.   ...++..++.+++.||+++.++++|+|++|+|++.+.....                    
T Consensus        85 ~~Y~~~K~~~~~~~~~---~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~--------------------  141 (299)
T KOG0764|consen   85 FFYDFLKSFITEGFNS---GLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQ--------------------  141 (299)
T ss_pred             HHHHHHHHHHhcCCCc---ccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhccccc--------------------
Confidence            9999999998543222   22578999999999999999999999999999999886531                    


Q ss_pred             hhhccccccccchhhhhhcchhhHHHHhHHHHHHHhhCCCCCCCccccCCCCcccccccccccccHHHHHHHHHhhcCcc
Q psy17653        168 RQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIRQDGLR  247 (379)
Q Consensus       168 ~~~G~~~ly~G~~~~~~~~~p~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~  247 (379)
                                                                                 ..+|++.++.+++|+++||++
T Consensus       142 -----------------------------------------------------------~~~Y~~~f~a~rki~k~EG~r  162 (299)
T KOG0764|consen  142 -----------------------------------------------------------STAYKGMFDALRKIYKEEGFR  162 (299)
T ss_pred             -----------------------------------------------------------ccccccHHHHHHHHHHHHhHH
Confidence                                                                       136778888888888888888


Q ss_pred             cccccccchhcccccchhHHHHHHHHHHHHhCCCCCCc--cchhhHHHHHHHHHHHHHHHhhhccHHHHHHHHhcCC-CC
Q psy17653        248 GLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPK--EECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASS-QQ  324 (379)
Q Consensus       248 gl~~G~~~~~~r~~~~~~~~~~~y~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ag~~a~~~t~Pldvi~~r~q~~~-~~  324 (379)
                      |||+|+.|.++.. .+.+++|..||.+|..+.+....+  ...+-...++.+.++.++|+.+|||++|+|+|||.++ ++
T Consensus       163 gLY~GlVP~L~Gv-shgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~  241 (299)
T KOG0764|consen  163 GLYKGLVPGLLGV-SHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSDNP  241 (299)
T ss_pred             HHHhhhhhHhhhh-chhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCc
Confidence            8888888888754 478999999999999885432222  1234466777777999999999999999999999986 67


Q ss_pred             CcccHHHHHHHHHHhhccccccCChHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q psy17653        325 NTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIMNT  376 (379)
Q Consensus       325 ~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~~~~~~~  376 (379)
                      .|++.+++++++++.||+.|||||+.++++|++|.+.|+|.+||.+++.+..
T Consensus       242 ~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~  293 (299)
T KOG0764|consen  242 RYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVT  293 (299)
T ss_pred             ccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhc
Confidence            8999999999999999999999999999999999999999999999998865



>KOG0752|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-10
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 7e-10
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 4e-04
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 38/294 (12%) Query: 109 MSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIR 168 + L +A C+A + F L T +++Q+Q + + +++ G+ G ++R Sbjct: 3 VKFLGAGTAACIADLIT-FPL-DTAKVRLQIQGESQGLVRTAASAQYR-GVLGTILTMVR 59 Query: 169 QDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGT------------ 216 +G R L+ G + R+M V G Y++ + K E G Sbjct: 60 TEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT---KGSEHAGIGSRLLAGSTTGA 116 Query: 217 --------SDCDEFDFDSRKINLG------LFGLTKQIIRQDGLRGLFKGFGPTVAREMP 262 +D + F ++ G K I R++G+RGL+KG P VAR Sbjct: 117 LAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAI 176 Query: 263 GYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASS 322 Y+ + L A+ ++ T A G G + PVDV+K+R S+ Sbjct: 177 VNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGA--GFCTTVIASPVDVVKTRYMNSA 234 Query: 323 --QQNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIM 374 Q ++A +++KEG A Y G P+ +R + V+F+ YE K+ + Sbjct: 235 LGQYHSAGHCA--LTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 286
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-42
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-39
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-38
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-34
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-22
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  149 bits (378), Expect = 2e-42
 Identities = 67/303 (22%), Positives = 109/303 (35%), Gaps = 42/303 (13%)

Query: 15  IDFTAGSLGGVALVYVGQPLDTVKVKMQT-----------YPQLYSSMIDCCKKVWRDEG 63
           + F            +  PLDT KV++Q                Y  ++     + R EG
Sbjct: 3   VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG 62

Query: 64  LVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASF 123
             R LY G +  +   ++  SV    Y   ++       TK  E   I +   AG     
Sbjct: 63  -PRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-----TKGSEHAGIGSRLLAGSTTGA 116

Query: 124 FSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTV 183
            +     PT+++K++ QA      + G   +         K I R++G+RGL+KG  P V
Sbjct: 117 LAVAVAQPTDVVKVRFQAQA----RAGGGRRYQ-STVEAYKTIAREEGIRGLWKGTSPNV 171

Query: 184 AREMPGYFVFFGGYEATRTLLAPADKPKEE-------------CGTSDCDEFDF-DSRKI 229
           AR           Y+  +  L  A+   ++             C T      D   +R +
Sbjct: 172 ARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYM 231

Query: 230 NL------GLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADK 283
           N               ++R++G R  +KGF P+  R      V F  YE  +  L  A +
Sbjct: 232 NSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQ 291

Query: 284 PKE 286
            +E
Sbjct: 292 SRE 294


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=6.8e-53  Score=388.88  Aligned_cols=280  Identities=21%  Similarity=0.322  Sum_probs=236.5

Q ss_pred             hhhHHHHHhhhhhhHHHHhhcChHHHHHHHHhcCCC--------CCCcHHHHHHHHHHhhCcccccccchhHhHhHHhHH
Q psy17653         11 KSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQ--------LYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVAE   82 (379)
Q Consensus        11 ~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~--------~~~~~~~~~~~i~~~~G~~~~ly~G~~~~l~~~~~~   82 (379)
                      .+.+.++++|++|++++.++++|+|++|+|+|++..        .|++.++++++++++||+ ++||||+.+++++.++.
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~-~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF-LSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCG-GGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccch-hheecccHHHHHHHHHH
Confidence            456789999999999999999999999999999752        578999999999999999 99999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHhHhhhcccHHHHHHHHHhcchhhhhcCCCccccccHHHH
Q psy17653         83 NSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGL  162 (379)
Q Consensus        83 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~  162 (379)
                      ++++|.+||.+++.+....+............+++|++|++++.++++|+|+||+|+|++.....               
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~---------------  148 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA---------------  148 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST---------------
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCC---------------
Confidence            99999999999995432211111111234678999999999999999999999999998754210               


Q ss_pred             HHHHHhhhccccccccchhhhhhcchhhHHHHhHHHHHHHhhCCCCCCCccccCCCCcccccccccccccHHHHHHHHHh
Q psy17653        163 TKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQIIR  242 (379)
Q Consensus       163 ~~~i~~~~G~~~ly~G~~~~~~~~~p~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  242 (379)
                                                                                     ...++.+.++++++|++
T Consensus       149 ---------------------------------------------------------------~~~~~~~~~~~~~~i~~  165 (297)
T 1okc_A          149 ---------------------------------------------------------------AQREFTGLGNCITKIFK  165 (297)
T ss_dssp             ---------------------------------------------------------------TTCSCSSHHHHHHHHHH
T ss_pred             ---------------------------------------------------------------cCcCCCCHHHHHHHHHH
Confidence                                                                           01345678888888999


Q ss_pred             hcCcccccccccchhcccccchhHHHHHHHHHHHHhCCCCCCccchhhHHHHHHHHHHHHHHHhhhccHHHHHHHHhcCC
Q psy17653        243 QDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQASS  322 (379)
Q Consensus       243 ~~G~~gl~~G~~~~~~r~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pldvi~~r~q~~~  322 (379)
                      +||++|||||+.|+++|++|..+++|.+||.+++.+.+..    ..+....+++|++||++++++++|+||||+|||.+.
T Consensus       166 ~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~----~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~  241 (297)
T 1okc_A          166 SDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS  241 (297)
T ss_dssp             HHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             hccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC----CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence            9999999999999999999999999999999999775432    223567889999999999999999999999999875


Q ss_pred             C-----CCcccHHHHHHHHHHhhccccccCChHHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17653        323 Q-----QNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYSKKIM  374 (379)
Q Consensus       323 ~-----~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~~~~~  374 (379)
                      .     ..|.++++|+++|+++||++|||||+.++++|. +.++++|.+||.+|+.+
T Consensus       242 ~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          242 GRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             TCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence            3     368999999999999999999999999999996 57889999999998753



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 379
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-24
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-21
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-11
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 97.9 bits (242), Expect = 7e-24
 Identities = 56/292 (19%), Positives = 107/292 (36%), Gaps = 37/292 (12%)

Query: 12  SGVIDFTAGSLGGVALVYVGQPLDTVKVKMQT--------YPQLYSSMIDCCKKVWRDEG 63
           S + DF AG +          P++ VK+ +Q           + Y  +IDC  ++ +++G
Sbjct: 5   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG 64

Query: 64  LVRGLYAGTIPAILANVAENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASF 123
                + G +  ++      ++ FA     ++I                 N ++G  A  
Sbjct: 65  -FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 123

Query: 124 FSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFGLTKQIIRQDGLRGLFKGFGPTV 183
            S   + P +  + +L A        G   +   GL     +I + DGLRGL++GF  +V
Sbjct: 124 TSLCFVYPLDFARTRLAAD----VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSV 179

Query: 184 AREMPGYFVFFGGYEATRT---------LLAPADKPKEECGTSDCDEFDFDSRKINL--- 231
              +     +FG Y+  +          ++      +     +    + FD+ +  +   
Sbjct: 180 QGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ 239

Query: 232 -----------GLFGLTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYE 272
                      G     ++I + +G +  FKG    V R M G FV    Y+
Sbjct: 240 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLV-LYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.95
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=2.3e-49  Score=362.30  Aligned_cols=277  Identities=20%  Similarity=0.313  Sum_probs=242.8

Q ss_pred             chhhHHHHHhhhhhhHHHHhhcChHHHHHHHHhcCCC--------CCCcHHHHHHHHHHhhCcccccccchhHhHhHHhH
Q psy17653         10 WKSGVIDFTAGSLGGVALVYVGQPLDTVKVKMQTYPQ--------LYSSMIDCCKKVWRDEGLVRGLYAGTIPAILANVA   81 (379)
Q Consensus        10 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~Q~~~~--------~~~~~~~~~~~i~~~~G~~~~ly~G~~~~l~~~~~   81 (379)
                      ..+...++++|++|++++.+++||||++|+|+|++..        .+++.++++++++++||+ ++||+|+.+.+++.++
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~-~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF-LSFWRGNLANVIRYFP   81 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCG-GGGGTTTHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhh-hhhhhccchhhhhhhc
Confidence            4567788999999999999999999999999998642        578999999999999999 9999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHhHhhhcccHHHHHHHHHhcchhhhhcCCCccccccHHH
Q psy17653         82 ENSVLFACYGFCQKIISLSTGTKNVEDMSILANASAGCLASFFSSFTLCPTELLKIQLQAAHEEATKLGNTSKINLGLFG  161 (379)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~  161 (379)
                      ..+++|.+|+.+++.+.................+.+|.+|++++.++++|+|++|+|+|.+.....              
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~--------------  147 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA--------------  147 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST--------------
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccc--------------
Confidence            999999999999999886554444334455677899999999999999999999999998775431              


Q ss_pred             HHHHHHhhhccccccccchhhhhhcchhhHHHHhHHHHHHHhhCCCCCCCccccCCCCcccccccccccccHHHHHHHHH
Q psy17653        162 LTKQIIRQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGTSDCDEFDFDSRKINLGLFGLTKQII  241 (379)
Q Consensus       162 ~~~~i~~~~G~~~ly~G~~~~~~~~~p~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (379)
                                                                                      .++++.+.++.+++++
T Consensus       148 ----------------------------------------------------------------~~~~~~~~~~~~~~~~  163 (292)
T d1okca_         148 ----------------------------------------------------------------AQREFTGLGNCITKIF  163 (292)
T ss_dssp             ----------------------------------------------------------------TTCSCSSHHHHHHHHH
T ss_pred             ----------------------------------------------------------------cccccccHHHHHHHhh
Confidence                                                                            1235668889999999


Q ss_pred             hhcCcccccccccchhcccccchhHHHHHHHHHHHHhCCCCCCccchhhHHHHHHHHHHHHHHHhhhccHHHHHHHHhcC
Q psy17653        242 RQDGLRGLFKGFGPTVAREMPGYFVFFGGYEATRTLLAPADKPKEECGALATMAAGGVGGIALWTVIFPVDVIKSRVQAS  321 (379)
Q Consensus       242 ~~~G~~gl~~G~~~~~~r~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pldvi~~r~q~~  321 (379)
                      ++||+++||+|+.|+++|++|+.+++|..||.+++.+.+..    ..+....++++++++.+++++|||+||||+|||.+
T Consensus       164 ~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~  239 (292)
T d1okca_         164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ  239 (292)
T ss_dssp             HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hccchhhhhccccccccceehHhhhhhhhccchhhhccccc----ccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhc
Confidence            99999999999999999999999999999999998765432    23457889999999999999999999999999997


Q ss_pred             CC-----CCcccHHHHHHHHHHhhccccccCChHHHHHHHhhhhhHHHHHHHHH
Q psy17653        322 SQ-----QNTANFVTQMTDIVKKEGVLALYNGLQPTLIRTIPASAVLFLVYEYS  370 (379)
Q Consensus       322 ~~-----~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~  370 (379)
                      ..     ..|.++++|+++++++||++|||||+.+|++|.+| .+++|.+||++
T Consensus       240 ~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         240 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             TTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            63     35889999999999999999999999999999866 57889999964



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure